HHsearch alignment for GI: 254780575 and conserved domain: COG3086
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms].
Probab=93.20 E-value=0.39 Score=23.12 Aligned_cols=64 Identities=19% Similarity=0.187 Sum_probs=42.9
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98625869999999999999999999997888998999999999999999999999998775562
Q gi|254780575|r 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314 (316)
Q Consensus 250 a~~~~~a~~~s~~~~l~Pv~a~i~~~~~l~E~~~~~~~iG~~lIi~gv~l~~~~~~~~~~k~~~~ 314 (316)
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~L-a~~L~~~e~~~~~~~~lg~~l~fl~~r~ysRkl~~~ 131 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAIL-AQYLFFSELIVIFGAFLGLALGFLLARRYSRKLAKR 131 (150)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 3675348999999999999999999999-998711248999999999999999999999886424