HHsearch alignment for GI: 254780575 and conserved domain: COG5006
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism].
Probab=99.84 E-value=1.2e-18 Score=118.52 Aligned_cols=277 Identities=16% Similarity=0.090 Sum_probs=184.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHH
Q ss_conf 744014527799999999999999999999996-3898899999999999999999999971000011221035001123
Q gi|254780575|r 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93 (316)
Q Consensus 15 ~~~~~~~~~~~G~~~~l~a~~lwg~~~~~~k~l-~~~~p~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
T Consensus 2 p~a~~~~~~~~p~~~ll~amvsiq~Gas~Ak~LFP~vG~~g~t~lRl~~aaLIll~l---~RPwr~r~-----~~~~~~~ 73 (292)
T COG5006 2 PGALRKLAVWLPILALLVAMVSIQSGASFAKSLFPLVGAAGVTALRLAIAALILLAL---FRPWRRRL-----SKPQRLA 73 (292)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHCC-----CHHHHHH
T ss_conf 864335565421999999999987328899987113662257999999999999998---51887635-----8202479
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH---
Q ss_conf 34346668875334666653345899999997699999999742023564379999999986565566236885205---
Q gi|254780575|r 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL--- 170 (316)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--- 170 (316)
T Consensus 74 ~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~G 149 (292)
T COG5006 74 LLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVG 149 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH----CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHH
T ss_conf 999988998878999999986452030211200589999985----0226547999999987775111666767677798
Q ss_pred ---HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---77999998653210001123444225788999999877775310013456567872566788653344211579999
Q gi|254780575|r 171 ---SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247 (316)
Q Consensus 171 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~t~i~~~~~ 247 (316)
T Consensus 150 v~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLE 227 (292)
T COG5006 150 VALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLE 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHCCHHCC--CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99999876899999997232104--6887216899999999998202564255263185799999999998623103789
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998625869999999999999999999997888998999999999999999999999
Q gi|254780575|r 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305 (316)
Q Consensus 248 ~~a~~~~~a~~~s~~~~l~Pv~a~i~~~~~l~E~~~~~~~iG~~lIi~gv~l~~~~~~ 305 (316)
T Consensus 228 miAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 228 MIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999607745789999873799999899996577989999999999999712312467