HHsearch alignment for GI: 254780575 and conserved domain: PRK10532
>PRK10532 threonine and homoserine efflux system; Provisional.
Probab=99.96 E-value=5.5e-26 Score=158.53 Aligned_cols=281 Identities=16% Similarity=0.136 Sum_probs=191.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHH
Q ss_conf 744014527799999999999999999999996-3898899999999999999999999971000011221035001123
Q gi|254780575|r 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93 (316)
Q Consensus 15 ~~~~~~~~~~~G~~~~l~a~~lwg~~~~~~k~l-~~~~p~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
T Consensus 2 ~~~~~~~~~~lp~ll~l~s~~s~q~gaa~A~~Lf~~~g~~gv~~lRl~~aAlvL~~---i~RP~~~~~--~r~~---~~~ 73 (293)
T PRK10532 2 PGSLRKLPVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIA---FFKPWRLRF--AKEQ---RLP 73 (293)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH---HHCCCCCCC--CHHH---HHH
T ss_conf 99766784268999999999998735999999863158688899999999999999---986433566--7889---999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC----CCH
Q ss_conf 3434666887533466665334589999999769999999974202356437999999998656556623688----520
Q gi|254780575|r 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG----IPL 169 (316)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~ 169 (316)
T Consensus 74 ~l~~G~~la~MN~~fy~Ai~riplG~AV~iEFlGPl~vA~~~sr----~--~~d~~w~~lA~~Gv~ll~~~~~~~~~~d~ 147 (293)
T PRK10532 74 LLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSR----R--PVDFVWVVLAVLGLWFLLPLGQDVSHVDL 147 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC----C--HHHHHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 99999999999999999998654058887762479999999647----5--89999999999999974034677675566
Q ss_pred ----HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf ----5779999986532100011234442257889999998777753100134565678725667886533442115799
Q gi|254780575|r 170 ----LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245 (316)
Q Consensus 170 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~t~i~~~ 245 (316)
T Consensus 148 ~Gv~~aL~Aa~~wA~Yil~~~r~~~~~--~~~~la~~~~vaa~~~-~p~~~~~~~~~~~~~~~l~~~l~vavlssviPY~ 224 (293)
T PRK10532 148 TGAALALGAGACWAIYILSGQRAGAEH--GPATVAVGSLIAALIF-VPIGALQAGEALWHWSILPLGLAVAILSTALPYS 224 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHH-HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 889999999999999999964732568--8402699999999999-9888760453327889999999999998789999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999986258699999999999999999999978889989999999999999999999999987755
Q gi|254780575|r 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312 (316)
Q Consensus 246 ~~~~a~~~~~a~~~s~~~~l~Pv~a~i~~~~~l~E~~~~~~~iG~~lIi~gv~l~~~~~~~~~~k~~ 312 (316)
T Consensus 225 Le~~aLrrl~a~~fgvL~slePa~Aal~G~llLgE~ls~~q~lGialVv~As~g~~lt~~r~p~~~~ 291 (293)
T PRK10532 225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKIKE 291 (293)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9999985378879999999889999999999956889799999999999999999970578987667