HHsearch alignment for GI: 254780575 and conserved domain: TIGR00776
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein; InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane.
Probab=97.80 E-value=0.00053 Score=38.76 Aligned_cols=66 Identities=5% Similarity=-0.023 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHCCC-------CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4211579999999862586999999999-9999999999997888-------9989999999999999999999
Q gi|254780575|r 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYT-APLLMIVSSVFILKQP-------IDTVRTIVFGIVVIAMVVYLLP 303 (316)
Q Consensus 238 ~~t~i~~~~~~~a~~~~~a~~~s~~~~l-~Pv~a~i~~~~~l~E~-------~~~~~~iG~~lIi~gv~l~~~~ 303 (316)
T Consensus 75 ~~WalGQ~~q~~~~~~~GvS~tmPistG~QLv~~sL~gvivfgeW~~~~~~~~GRmt~lAl~liiiGv~lts~~ 148 (336)
T TIGR00776 75 AFWALGQINQFKSMRYIGVSKTMPISTGLQLVGGSLFGVIVFGEWSTSIQILLGRMTLLALILIIIGVYLTSIS 148 (336)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998754587777640202201456648999878775301224476310130549999999999999997302