HHsearch alignment for GI: 254780575 and conserved domain: TIGR03340

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.73  E-value=1.9e-14  Score=95.70  Aligned_cols=270  Identities=15%  Similarity=0.072  Sum_probs=172.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999999638988-9999999999999999999997100001122103500112334346668875
Q gi|254780575|r   26 GTLFVFCAYILWGITPLYTQFLEQVSV-LEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVH  104 (316)
Q Consensus        26 G~~~~l~a~~lwg~~~~~~k~l~~~~p-~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (316)
T Consensus         2 a~~lvL~aA~lHA~WN~l~K~~~d~~~~~~~~~--~~~~~i~~~p~~~~~~~~~~~---p~p~~~~w~~i~~S~~~h~~Y   76 (281)
T TIGR03340         2 ALTLVVFSALMHAGWNLMAKSHADKEPDFLWWA--LLAHSVLLTPYGLWYLAQVGW---SRLPATFWLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHCCC---CCCCHHHHHHHHHHHHHHHHH
T ss_conf             799999999999999999954888108999999--999999999999999986368---998678999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH------HHHHHHHHH
Q ss_conf             33466665334589999999769999999974202356437999999998656556623688520------577999998
Q gi|254780575|r  105 WGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL------LSLAIAVTW  178 (316)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~  178 (316)
T Consensus        77 ~~~L~~aY~~gdls~vYPiaRgsPllv~l~a~l~lgE~ls~~~~~Gi~li~~Gi~~l~~~~~~~~~~~~l~~al~t~~~i  156 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGT  156 (281)
T ss_pred             HHHHHHHHHCCCCCEECHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             99999998358841111064157699999999997476889899999999999999840120356604799999999999


Q ss_pred             HHHHHHHCCC--CCCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             6532100011--2344-422578899999987777531001345656787256678865334421157999999986258
Q gi|254780575|r  179 SAYCFARKTI--PVGS-SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK  255 (316)
Q Consensus       179 ~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~t~i~~~~~~~a~~~~~  255 (316)
T Consensus       157 a~Ytl~D~~a~~gv~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~s~~sY~lvl~A~~~~p  236 (281)
T TIGR03340       157 AIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGGAYALVLWAMTRLP  236 (281)
T ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999998655047666569999999999999999999999657515677899889999999999999999999981084


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             699999999999999999999978889989999999999999999
Q gi|254780575|r  256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY  300 (316)
Q Consensus       256 a~~~s~~~~l~Pv~a~i~~~~~l~E~~~~~~~iG~~lIi~gv~l~  300 (316)
T Consensus       237 va~VaalRetSIlfa~l~g~~~lkE~~~~~Rl~~~~li~~Gvvll  281 (281)
T TIGR03340       237 VATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             265676998899999999999977965098999999999979969