HHsearch alignment for GI: 254780575 and conserved domain: pfam06800
>pfam06800 Sugar_transport Sugar transport protein. This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins, ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.
Probab=98.04 E-value=0.00016 Score=41.56 Aligned_cols=197 Identities=12% Similarity=0.070 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH----HHHHHHCCCCCC--
Q ss_conf 3466688753346666533458999999-976999999997420235643799999999865----655662368852--
Q gi|254780575|r 96 FSATILAVHWGFFIYALLTRQGFLTSFS-YFVTPVISVFLGSVFLKERLNHLQIIAALLIIL----SLLIMTLHSGIP-- 168 (316)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~-- 168 (316)
T Consensus 49 isG~~WaiGQ~~Qf~s~~~~GVS~tmPiSTg~QLvg~sL~Gv~~fgEW~t~~~~~~G~~Al~liiiG~~lTs~~~~~~~~ 128 (268)
T pfam06800 49 ISGAFWAIGQIGQFKSFKLIGVSKTMPISTGFQLVGTSLFGVLVFGEWSTSMQKILGFLALILIIIGIYLTSLQDKKEAK 128 (268)
T ss_pred HHHHHHHHHHHHHHEEEEEECCEEEEEEEHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
T ss_conf 98999986343142252330210233102318999888998710044651789999999999999727137631365556
Q ss_pred -----H---HHH---HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf -----0---577---99999865321000112344422578899999987777531001345656787256678865334
Q gi|254780575|r 169 -----L---LSL---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237 (316)
Q Consensus 169 -----~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 237 (316)
T Consensus 129 ~~~~~~~~kgi~~LlistiGY~~Y~v~p~~~~~~g~~~~lPQaiGm~iga~i~~~~-----~~~~-~~~k~~~~-nii~G 201 (268)
T pfam06800 129 VESSKNLKKGIILLLISTIGYVGYVVLPQLFKVDGLSAILPQAIGMVIGALIFSLK-----NFKV-FFEKYTWL-NIIPG 201 (268)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHHHHHHHHHHH-----CCCC-CHHHHHHH-HHHHH
T ss_conf 76511055276788667413621545488608873313617789999999999984-----5543-13577999-87656
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH----HHHHHHHHHHHHH
Q ss_conf 4211579999999862586999999999999999999999788899899----9999999999999
Q gi|254780575|r 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR----TIVFGIVVIAMVV 299 (316)
Q Consensus 238 ~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~i~~~~~l~E~~~~~~----~iG~~lIi~gv~l 299 (316)
T Consensus 202 ~~w~ignl~~~~S~~~~GvatafslSQl~VVISTlGGI~~L~EkKtkkem~~~i~G~iLIv~Gail 267 (268)
T pfam06800 202 LFWGIGNLFMLISAQKVGVATAFSLSQLGVVISTLGGIFFLGEKKTKKEMIAVIIGIILIIVGAVL 267 (268)
T ss_pred HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHEE
T ss_conf 999999999986246218022345776666997611234760357503577899988898633111