BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780575|ref|YP_003064988.1| hypothetical protein
CLIBASIA_02310 [Candidatus Liberibacter asiaticus str. psy62]
(316 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|302521241|ref|ZP_07273583.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302430136|gb|EFL01952.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 385
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 2/300 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A + G + F AY +WG+ PL+ L+ E+++HR++WSL V ++
Sbjct: 7 TTPAAEGTSRAGLSYGFGAYGIWGLVPLFWPLLKPAGAGEILAHRMVWSLGVVAILLLCI 66
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L++P+ +G++ +A ++ V+WGF+I+A+ S YF+ P++S+ L
Sbjct: 67 RR-WAWAGELLRDPRRLGLVAVAAAVITVNWGFYIWAVNAGHVVEASLGYFINPLVSIAL 125
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G + L ERL +Q +A + S+L++ + G P +SL +A ++ AY A+K + +G
Sbjct: 126 GVLLLGERLRPVQWVAVATGVASVLVLAIGYGKPPWISLVLAFSFGAYGLAKKKVNLGGI 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
E E + +PAL +++W G G F L G++ + F R
Sbjct: 186 ESLAAETALQFLPALGFLIWLGARGEATFTGEGAGHAALLASTGIVTAVPLVFFGAAAIR 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LST+G+++Y AP+ +F + + R FG+V IA+V+ + + N+
Sbjct: 246 VPLSTLGLLQYLAPVFQFGLGIFYFHEEMPAARWAGFGLVWIALVLLTWDALRTARANRR 305
>gi|254780575|ref|YP_003064988.1| hypothetical protein CLIBASIA_02310 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040252|gb|ACT57048.1| hypothetical protein CLIBASIA_02310 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 316
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV 60
MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV
Sbjct: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV 60
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT
Sbjct: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA 180
SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA
Sbjct: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA 180
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN
Sbjct: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY
Sbjct: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
Query: 301 LLPTVINSGKNKTKKS 316
LLPTVINSGKNKTKKS
Sbjct: 301 LLPTVINSGKNKTKKS 316
>gi|86148264|ref|ZP_01066560.1| RarD protein [Vibrio sp. MED222]
gi|85833960|gb|EAQ52122.1| RarD protein [Vibrio sp. MED222]
Length = 302
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 89/301 (29%), Positives = 155/301 (51%), Gaps = 2/301 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ T G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 2 TQEEQQRTRQGVLLAVGAYTMWGIAPIYFKSLSDVSPLEILSHRVVWSF-FLLAFLLHIG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++DTL + + LV ++ ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RSWRKVRDTLTSKPKMLYLVATSILVGANWLIFIWAVNSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ A L + +LI + G +P++++A+A ++ Y RK + + +
Sbjct: 121 MLFLGERLRKLQWFAVALAAIGVLIQLIAFGSVPIVAIALAFSFGFYGLLRKKVSLEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE V+ A Y+++ S F + + L L+ G++ + F+ R
Sbjct: 181 GLFIETLVMLPLAATYLLFIADSPTSDFSMNPMQLNLLLVAAGVITTIPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I + + + I F + A+V++ + N+ KNK
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEAFTSDKAITFAFIWGALVIFSFDGLRNNRKNKRA 300
Query: 315 K 315
K
Sbjct: 301 K 301
>gi|318056628|ref|ZP_07975351.1| integral membrane protein [Streptomyces sp. SA3_actG]
gi|318077971|ref|ZP_07985303.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length = 367
Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 2/300 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A + G + F AY +WG+ PL+ L+ E+++HR++WSL V ++
Sbjct: 7 TTPAAEGTSRAGLSYGFGAYGIWGLVPLFWPLLKPAGAGEILAHRMVWSLGVVAILLLCI 66
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L++P+ +G++ +A ++ V+WGF+I+A+ S YF+ P++S+ L
Sbjct: 67 RR-WAWAGELLRDPRRLGLVAVAAAVITVNWGFYIWAVNAGHVVEASLGYFINPLVSIAL 125
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G + L ERL +Q +A + S+L++ + G P +SL +A ++ AY A+K + +G
Sbjct: 126 GVLLLGERLRPVQWVAVATGVASVLVLAIGYGKPPWISLVLAFSFGAYGLAKKKVNLGGI 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
E E + +PAL +++W G G F L G++ + F R
Sbjct: 186 ESLAAETALQFLPALGFLIWLGARGEATFTGEGAGHAALLASTGIVTAVPLVFFGAAAIR 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LST+G+++Y AP+ +F + + R FG+V IA+V+ + + N+
Sbjct: 246 VPLSTLGLLQYLAPVFQFGLGIFYFHEEMPAARWAGFGLVWIALVLLTWDALRTARANRR 305
>gi|84393648|ref|ZP_00992399.1| RarD protein [Vibrio splendidus 12B01]
gi|84375716|gb|EAP92612.1| RarD protein [Vibrio splendidus 12B01]
Length = 302
Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ T G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 2 TQEEQQRTRQGVLLAVGAYTMWGIAPIYFKSLSDVSPLEILSHRVVWSF-FLLAFLLHIG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D L + + LV ++ ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RSWRKVRDILTSKPKMLYLVATSILVGANWLIFIWAVNSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ A L + +LI + G +P++++A+A ++ Y RK + + +
Sbjct: 121 MLFLGERLRKLQWFAVALAAIGVLIQLIAFGSVPIVAIALAFSFGFYGLLRKKVSLEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE V+ A Y+++ S F + + L L+ G++ + F+ R
Sbjct: 181 GLFIETLVMLPLAATYLLFIADSPTSDFSMNPMQLNLLLVAAGVITTIPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I + + + I F + A+V++ + N+ KNK
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEAFTSDKAITFAFIWGALVIFSFDGLRNNRKNKRA 300
Query: 315 K 315
K
Sbjct: 301 K 301
>gi|218710964|ref|YP_002418585.1| hypothetical protein VS_3078 [Vibrio splendidus LGP32]
gi|218323983|emb|CAV20345.1| RarD [Vibrio splendidus LGP32]
Length = 302
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 87/301 (28%), Positives = 156/301 (51%), Gaps = 2/301 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ T G L AY +WGI P+Y + L +VS E++SHRV+WS + +++
Sbjct: 2 TQDDQQRTRQGILLAVAAYTMWGIAPIYFKSLSEVSPFEILSHRVVWSF-FLLAFLLHIG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++DTL + + LV ++T++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RSWRKVRDTLTSKPKMLYLVATSTLVGANWLIFIWAVNSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL ERL LQ A L + ++I + G +P++++A+A ++ Y RK + + +
Sbjct: 121 MFFLGERLRKLQWFAVALAAIGVIIQLIAFGSVPIVAIALAFSFGFYGLLRKKVSLEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE V+ A Y+++ S + + L L+ G++ + F+ R
Sbjct: 181 GLFIETLVMLPIAATYLLFIADSATSDLSMNPMQLNLLLVAAGVITTVPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I + + + + I F + A+V++ + N+ KNK
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEALTSDKAITFAFIWGALVIFSFDGLRNNKKNKRA 300
Query: 315 K 315
K
Sbjct: 301 K 301
>gi|119714799|ref|YP_921764.1| transporter DMT superfamily protein [Nocardioides sp. JS614]
gi|119535460|gb|ABL80077.1| RarD protein, DMT superfamily transporter [Nocardioides sp. JS614]
Length = 493
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 147/291 (50%), Gaps = 2/291 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G F F AY +WG PLY LE E+++HRVLWS + ++ + L
Sbjct: 193 EPRRGLAFGFAAYAMWGAFPLYWPLLEPAGATEILAHRVLWSALTMGLLLLVLART-PQL 251
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L++ + +L +A +++V+W +I+ + + TS YF+ P+++V +G V L E
Sbjct: 252 RAVLRDRRVRLLLTIAAAVISVNWVTYIWGVNNDRVVETSLGYFINPLVTVLMGVVVLHE 311
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL LQ +A L +++++ + G P ++L +A ++ +Y +KT VG++E E
Sbjct: 312 RLRPLQWMAMGLASGAVVVLAVDYGRLPWVALILAFSFGSYGLCKKTANVGATESLAFET 371
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+A A Y+ W G++GG +F L G++ + F R + T+G
Sbjct: 372 AVIAPFAAGYLAWLGWTGGSNFASHGAGHALLFATTGVVTAVPLICFGAAATRVSMVTLG 431
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+++Y AP++ V + + R + F +V IA+VV+ + V + +
Sbjct: 432 LLQYLAPIIQFALGVLWFHEDMPAGRWVGFVLVWIALVVFTVEAVNHRRRQ 482
>gi|153834695|ref|ZP_01987362.1| RarD protein [Vibrio harveyi HY01]
gi|148868891|gb|EDL67951.1| RarD protein [Vibrio harveyi HY01]
Length = 304
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 153/301 (50%), Gaps = 2/301 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L AY +WGI P+Y + + +VS LE++SHRV WS + A+++F
Sbjct: 2 TPEEQQRARQGVLLAVGAYTMWGIAPIYFKSIAEVSPLEILSHRVFWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D +KN + LV +A ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RQWRSVRDIIKNKTKMMYLVSTAILVGANWLIFIWAVTSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ A L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 121 MVFLGERLRKLQWFAVALAACGVLVQLIVFGSVPVVAIALAMSFGFYGLLRKKVSVEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE V+ A ++ + + + F LI G++ + F+ R
Sbjct: 181 GLFIETLVMLPAASIFLFFIASTPTSNMFENPWQLNTLLIAAGVITTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I +P + + I F + A+VV+ + N+ K++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEPFTSDKAITFAFIWGALVVFSFDGLRNNRKSRKA 300
Query: 315 K 315
K
Sbjct: 301 K 301
>gi|148978461|ref|ZP_01814935.1| RarD protein [Vibrionales bacterium SWAT-3]
gi|145962368|gb|EDK27648.1| RarD protein [Vibrionales bacterium SWAT-3]
Length = 302
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 90/302 (29%), Positives = 157/302 (51%), Gaps = 2/302 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ T G L AY +WGI P+Y + L +VS LE++SHRV+WS + +++
Sbjct: 2 TQDEQQRTRQGILLAIGAYTMWGIAPIYFKSLSEVSPLEILSHRVVWSF-FLLALLLHVG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G ++DTL + + LV ++ ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RGWRKVRDTLTSKPKMLYLVATSILVGANWLIFIWAVNSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL ERL LQ A L + ++I + G +P++++A+A ++ Y RK + + +
Sbjct: 121 MFFLGERLRKLQWFAVALAAIGVIIQLIAFGSVPIVAIALAFSFGFYGLLRKKVSLEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE V+ A Y+++ S F + + L LI G++ + F+ R
Sbjct: 181 GLFIETLVMLPIAATYLLFIADSPTSDFSMNPMQLNLLLIAAGVITTVPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I + + I F + A+V++ + N+ K+K
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEAFTMDKAITFAFIWGALVIFSFDGLRNNKKSKQA 300
Query: 315 KS 316
KS
Sbjct: 301 KS 302
>gi|163803191|ref|ZP_02197073.1| RarD protein [Vibrio sp. AND4]
gi|159173012|gb|EDP57846.1| RarD protein [Vibrio sp. AND4]
Length = 304
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 86/302 (28%), Positives = 153/302 (50%), Gaps = 2/302 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L AY +WGI P+Y + + +VS LE++SHRV WS + A+++F
Sbjct: 2 TPEEQQRARQGILLAVGAYTMWGIAPIYFKSIAEVSPLEILSHRVFWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D +KN + L+ +A ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RQWRSVRDIIKNKTKMVYLISTAILVGANWLIFIWAVTSNHMLDASLGYYINPLINVILG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ A +L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 121 MVFLGERLRKLQWFAVVLATCGVLVQLIVFGSVPVVAIALAMSFGCYGLLRKKVSVEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE V+ A ++ + + + LI G++ + F+ R
Sbjct: 181 GLFIETLVMLPAASIFLFFIANTPTSNMVENPWQLNTLLIAAGVITTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I +P + + I F + A+VV+ + N+ K++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEPFTSDKAITFAFIWGALVVFSFDGLRNNRKSRKA 300
Query: 315 KS 316
S
Sbjct: 301 AS 302
>gi|333025077|ref|ZP_08453141.1| putative integral membrane protein [Streptomyces sp. Tu6071]
gi|332744929|gb|EGJ75370.1| putative integral membrane protein [Streptomyces sp. Tu6071]
Length = 358
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 2/300 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A + G + F AY +WG+ PL+ L+ E+++HR++WSL V ++
Sbjct: 7 TTPAAESTSRAGLSYGFGAYGIWGLVPLFWPLLKPAGAGEILAHRMVWSLGVVAILLLCI 66
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L++P+ +G++ +A ++ V+WGF+I+A+ S YF+ P++S+ L
Sbjct: 67 RR-WAWAGELLRDPRRLGLVAVAAAVITVNWGFYIWAVNAGHVVEASLGYFINPLVSIAL 125
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G + L ERL Q +A + S+L++ + G P +SL +A ++ AY A+K + +G
Sbjct: 126 GVLLLGERLRPAQWVAVATGVASVLVLAIGYGKPPWISLMLAFSFGAYGLAKKKVNLGGI 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
E E + +PAL +++W G G F L G++ + F R
Sbjct: 186 ESLAAETALQFLPALGFLIWLGARGEATFTGEGAGHAALLASTGIITAVPLVFFGAAAIR 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LST+G+++Y AP+ +F + + R FG+V IA+V+ + + N+
Sbjct: 246 VPLSTLGLLQYLAPVFQFGLGIFYFHEEMPAARWAGFGLVWIALVLLTWDALRTARANRR 305
>gi|21222975|ref|NP_628754.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|10129737|emb|CAC08293.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length = 362
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 74/298 (24%), Positives = 147/298 (49%), Gaps = 2/298 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ +G L F AY +WG+ PL+ L+ E+++HR++WSL V A+++
Sbjct: 4 SSRSDQRVGLLNGFAAYGMWGLVPLFWPLLKPAGAGEILAHRMVWSLAFVAVALLFVRR- 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + L+ P+ + ++ +A ++ V+WG +I+A+ + S YF+ P++++ +G +
Sbjct: 63 WAWAGELLRQPRRLALVAVAAAVITVNWGVYIWAVNSGHVVEASLGYFINPLVTIAMGVL 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGF 196
LKERL Q A ++L++ + G P +SL +A +++ Y +K + +G E
Sbjct: 123 LLKERLRPAQWAAVGTGFAAVLVLAVGYGQPPWISLCLAFSFATYGLVKKKVNLGGVESL 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E + +PAL Y++W G G F + L G++ + F R L
Sbjct: 183 AAETAIQFLPALGYLLWLGAQGESTFTTEGAGHSALLAATGVVTAIPLVCFGAAAIRVPL 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
ST+G+++Y AP+ + V + + R FG+V +A+ + + + +
Sbjct: 243 STLGLLQYLAPVFQFLLGVLYFGEAMPPERWAGFGLVWLALTLLTWDALRTARRTARA 300
>gi|269964537|ref|ZP_06178776.1| rarD protein [Vibrio alginolyticus 40B]
gi|269830664|gb|EEZ84884.1| rarD protein [Vibrio alginolyticus 40B]
Length = 305
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 84/301 (27%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ E+ G L AY +WGI P+Y + + QVS LE++SHRV+WS + A+++
Sbjct: 1 MTPEDEQQRARQGILLAIGAYTMWGIAPMYFKSIAQVSPLEILSHRVIWSF-FLLAALLH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
F K+ + L+ S+ ++ +W FI+A+ + S Y++ P+I+V
Sbjct: 60 FGRHWRSAYHIAKDKTKIAYLIASSMLIGGNWLIFIWAVNSNHMLDASLGYYINPLINVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG VFL ERL LQ A +L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 120 LGMVFLGERLRKLQWFAVVLAGCGVLVQLIVFGSVPVVAMALAMSFGFYGLLRKKVSVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G FIE +L A Y+++ + + + LI G++ + F+
Sbjct: 180 KTGLFIETLLLLPVAAVYLLFVADTPTSNMLTNPLTLNSLLIAAGVITTLPLLCFTGAAT 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + +P + I F + A+VV+ + N+ +++
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLMYGEPFTMDKAITFVFIWGALVVFSFDGLRNNRRSR 299
Query: 313 T 313
Sbjct: 300 R 300
>gi|254230200|ref|ZP_04923593.1| RarD protein [Vibrio sp. Ex25]
gi|262392865|ref|YP_003284719.1| protein rarD [Vibrio sp. Ex25]
gi|151937285|gb|EDN56150.1| RarD protein [Vibrio sp. Ex25]
gi|262336459|gb|ACY50254.1| protein rarD [Vibrio sp. Ex25]
Length = 305
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 84/301 (27%), Positives = 155/301 (51%), Gaps = 2/301 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ E+ G L AY +WGI P+Y + + QVS LE++SHRV+WS + A+++
Sbjct: 1 MTPEDEQQRARQGILLAIGAYTMWGIAPMYFKSIAQVSPLEILSHRVIWSF-FLLAALLH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
F + K+ + L+ S+ ++ +W FI+A+ + S Y++ P+I+V
Sbjct: 60 FGRHWRSVYYIAKDKTKIAYLIASSVLIGGNWLIFIWAVNSNHMLDASLGYYINPLINVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG VFL ERL LQ A +L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 120 LGMVFLGERLRKLQWFAVVLAGCGVLVQLIVFGSVPVVAMALAMSFGFYGLLRKKVSVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G FIE +L A Y+++ + + + LI G++ + F+
Sbjct: 180 KTGLFIETLLLLPVAAVYLLFIAETPTSNMLTNPLALNSLLIAAGVITTLPLLCFTGAAT 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + +P + I F + A+VV+ + N+ +++
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLMYGEPFTMDKAITFAFIWGALVVFSFDGLRNNRRSR 299
Query: 313 T 313
Sbjct: 300 R 300
>gi|269962278|ref|ZP_06176630.1| rarD protein [Vibrio harveyi 1DA3]
gi|269832981|gb|EEZ87088.1| rarD protein [Vibrio harveyi 1DA3]
Length = 304
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 88/300 (29%), Positives = 156/300 (52%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G L AY +WGI P+Y + + +VS LE++SHRV+WS + A+++F
Sbjct: 2 TPEEQQRSRQGVLLAIGAYTMWGIAPIYFKSIAEVSPLEILSHRVIWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D +KN + LV +A ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RHWRSVRDIIKNKTKMMFLVSTAILVGANWLIFIWAVNSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ A +L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 121 MVFLGERLRKLQWFAVVLAACGVLVQLIVFGSVPVVAIALAMSFGFYGLLRKKVSVEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE V+ A Y+++ S + + LI G++ + F+ R
Sbjct: 181 GLFIETLVMLPAAAIYLLFIASSPTSNMLDNPMQLNTLLIAAGVITTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I +P + + I F + A+VV+ + N+ K++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEPFTSDKAITFAFIWGALVVFSFDGLRNNRKSRKA 300
>gi|91228027|ref|ZP_01262112.1| RarD protein [Vibrio alginolyticus 12G01]
gi|91188256|gb|EAS74555.1| RarD protein [Vibrio alginolyticus 12G01]
Length = 305
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 84/301 (27%), Positives = 154/301 (51%), Gaps = 2/301 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ E+ G L AY +WGI P+Y + + QVS LE++SHRV+WS + A+++
Sbjct: 1 MTPEDEQQRARQGILLAIGAYTMWGIAPMYFKSIAQVSPLEILSHRVIWSF-FLLAALLH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
F K+ + L+ S+ ++ +W FI+A+ + S Y++ P+I+V
Sbjct: 60 FGRHWRSAYHIAKDKTKIAYLIASSMLIGGNWLIFIWAVNSNHMLDASLGYYINPLINVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG VFL ERL LQ A +L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 120 LGMVFLGERLRKLQWFAVVLAGCGVLVQLIVFGSVPVVAMALAMSFGFYGLLRKKVSVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G FIE +L A Y+++ + + + LI G++ + F+
Sbjct: 180 KTGLFIETLLLLPVAAVYLLFIADTPTSNMLTNPLTLNSLLIAAGVITTLPLLCFTGAAT 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + +P + I F + A+VV+ + N+ +++
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLMYGEPFTMDKAITFVFIWGALVVFSFDGLRNNRRSR 299
Query: 313 T 313
Sbjct: 300 R 300
>gi|295837087|ref|ZP_06824020.1| integral membrane protein [Streptomyces sp. SPB74]
gi|197697196|gb|EDY44129.1| integral membrane protein [Streptomyces sp. SPB74]
Length = 367
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 78/299 (26%), Positives = 150/299 (50%), Gaps = 2/299 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ + G + F AY +WG+ PL+ L+ E+++HR++WSL V ++
Sbjct: 8 QDTGQGTSRAGLSYGFGAYGIWGLVPLFWPLLKPAGAGEILAHRMVWSLGVVAILLLCVR 67
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++P+ + ++ +A ++ V+WG +I+A+ S YF+ P++S+ LG
Sbjct: 68 R-WAWAAELARDPRRLALVAVAAAVITVNWGVYIWAVNAGHVVEASLGYFINPLVSIALG 126
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L ERL +Q +A + S+L++ + G P +SLA+A ++ AY A+K + +G E
Sbjct: 127 VLLLGERLRPVQWVAVATGVASVLVLAIGYGKPPWISLALAFSFGAYGLAKKKVNLGGIE 186
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
E + +PAL +++W G GG F L G++ + F R
Sbjct: 187 SLAAETALQFLPALGFLLWLGARGGSTFTGEGTGHAALLASTGIVTAVPLVFFGAAAIRV 246
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LST+G+++Y AP+ +F + + R FG+V IA+++ + + N+
Sbjct: 247 PLSTLGLLQYLAPVFQFALGIFYFHEEMPPARWAGFGLVWIALLLLTWDALRTARANRR 305
>gi|256785912|ref|ZP_05524343.1| integral membrane protein [Streptomyces lividans TK24]
gi|289769805|ref|ZP_06529183.1| integral membrane protein [Streptomyces lividans TK24]
gi|289700004|gb|EFD67433.1| integral membrane protein [Streptomyces lividans TK24]
Length = 368
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/298 (23%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ +G L F AY +WG+ PL+ L+ E+++HR++WSL V A+++
Sbjct: 4 SSRSDQRVGLLNGFAAYGMWGLVPLFWPLLKPAGAGEILAHRMVWSLAFVAVALLFVRR- 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + L+ P+ + ++ +A ++ V+WG +I+A+ + S YF+ P++++ +G +
Sbjct: 63 WAWAGELLRQPRRLALVAVAAAVITVNWGVYIWAVNSGHVVEASLGYFINPLVTIAMGVL 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGF 196
LKERL Q A ++L++ + G P +A +++ Y +K + +G E
Sbjct: 123 LLKERLRPAQWAAVGTGFAAVLVLAVGYGQPPWISLCLAFSFATYGLVKKKVNLGGVESL 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E + +PAL Y++W G G F + L G++ + F R L
Sbjct: 183 AAETAIQFLPALGYLLWLGAQGESTFTTEGAGHSALLAATGVVTAIPLVCFGAAAIRVPL 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
ST+G+++Y AP+ + + + + R FG+V +A+ + + + +
Sbjct: 243 STLGLLQYLAPVFQFLLGILYFGEAMPPERWAGFGLVWLALTLLTWDALRTARRTARA 300
>gi|156972687|ref|YP_001443594.1| permease [Vibrio harveyi ATCC BAA-1116]
gi|156524281|gb|ABU69367.1| hypothetical protein VIBHAR_00345 [Vibrio harveyi ATCC BAA-1116]
Length = 304
Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 87/300 (29%), Positives = 152/300 (50%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L AY +WGI P+Y + + +VS LE++SHRV WS + A+++F
Sbjct: 2 TPEEQQRARQGVLLAVGAYTMWGIAPIYFKSIAEVSPLEILSHRVFWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D +KN + LV +A ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RQWRSVRDIIKNKTKMMYLVTTAILVGANWLIFIWAVTSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ A L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 121 MVFLGERLRRLQWFAVALAACGVLVQLIVFGSVPVVAIALAMSFGFYGLLRKKVSVEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE V+ A ++ + + + F LI G++ + F+ R
Sbjct: 181 GLFIETLVMLPAASIFLFFIASTPTSNMFDNPWQLNTLLIAAGVITTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I +P + + I F + A+VV+ + N+ K++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEPFTSDKAITFAFIWGALVVFSFDGLRNNRKSRKA 300
>gi|302553471|ref|ZP_07305813.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302471089|gb|EFL34182.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length = 341
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 73/294 (24%), Positives = 146/294 (49%), Gaps = 2/294 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L F AY +WG+ PL+ L+ +E+++HR++WSL V A++ +
Sbjct: 6 ERHIGLLNGFAAYGMWGLVPLFWPLLKPAGAVEILAHRMVWSLVFVGAALLVLRR-WAWA 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L+ P+ +G++ +AT++ ++WG +I+++ + S YF+ P++++ +G + LKE
Sbjct: 65 GELLRQPRKLGLVTVAATVITINWGLYIWSVNSGHVVEASLGYFINPLVTIAIGVLLLKE 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL +Q A +++++T+ G P +SLA+A +++ Y +K + +G E E
Sbjct: 125 RLRPVQWAAVGTGCAAVVVLTVGYGRPPWISLALAFSFATYGLVKKKVNLGGVESLAAET 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ +PAL Y+ W GG F L G++ + F R LST+G
Sbjct: 185 AIQFLPALGYLAWLTSQGGSTFAAEGAGHAALLASAGIVTALPLVCFGAAAIRVPLSTIG 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+++Y P+ + V + + R F +V +A+ + + + +
Sbjct: 245 LLQYLTPVFQFLLGVLYFHEAMPPERWAGFALVWLALTLLTWDALRTARRASRA 298
>gi|261250051|ref|ZP_05942628.1| protein rarD [Vibrio orientalis CIP 102891]
gi|260939555|gb|EEX95540.1| protein rarD [Vibrio orientalis CIP 102891]
Length = 304
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 88/300 (29%), Positives = 150/300 (50%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G AY +WGI P+Y + L VS LE++SHRV+WS + A+++F
Sbjct: 2 TPDEQQRAKQGVFLAIGAYTMWGIAPIYFKALGDVSPLEILSHRVVWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D +K+ + + LV +A ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RRWRNVRDVIKSKQKLMYLVTTAVLVGANWLIFIWAVNSDHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ A L +L+ IP +++A+A ++ Y RK + + +
Sbjct: 121 MLFLGERLRKLQWFAVALATCGVLVQLFVFGSIPTVAIALAFSFGFYGLLRKKVSLEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E VL A Y++W + +F + L LI G++ + F+ R
Sbjct: 181 GLFVETLVLLPAAAIYLMWIADTPTSNFTENPLNLNLLLISAGIITTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I + +TI F + A+VV+ + + K+K
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGEAFTMDKTITFAFIWGALVVFSFDGLRANKKSKKA 300
>gi|282860753|ref|ZP_06269819.1| RarD protein, DMT superfamily transporter [Streptomyces sp. ACTE]
gi|282564489|gb|EFB70025.1| RarD protein, DMT superfamily transporter [Streptomyces sp. ACTE]
Length = 342
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 70/295 (23%), Positives = 143/295 (48%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L+ AY +WG+ PL+ LE +E+++HR++WSL V A++ +
Sbjct: 4 KNEQRAGLLYGIGAYGMWGLVPLFWPLLEPSGAVEILAHRMVWSLAVVGVALLALRR-WA 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+++ L P+ + ++ +AT+++V+WG +I+++ S YF+ P++++ +G + L
Sbjct: 63 WIRELLGRPRRLALIAVAATVISVNWGLYIWSVNNGHVVEASLGYFINPLVTIAMGVLLL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL Q A + ++L++ + G P +SL +A +++ Y +K + +G E
Sbjct: 123 GERLRPAQWAAVATGLAAVLVLAIGYGQPPWISLVLAFSFATYGLVKKKVDMGGLESLAA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E VL +PAL +++W G F L G++ + F R LS
Sbjct: 183 ETAVLFVPALGFLLWLAARGESTFVTSGAGHGALLAATGIITAIPLICFGAAAIRVPLSV 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G+++Y AP+ + + + R F +V +A+ + + + + +
Sbjct: 243 LGLLQYLAPVFQFALGILYFHEEMPPERWAGFALVWVALALLTWEALRTARRTRA 297
>gi|302864921|ref|YP_003833558.1| RarD protein, DMT superfamily transporter [Micromonospora
aurantiaca ATCC 27029]
gi|302567780|gb|ADL43982.1| RarD protein, DMT superfamily transporter [Micromonospora
aurantiaca ATCC 27029]
Length = 308
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 86/295 (29%), Positives = 157/295 (53%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L+ AY++WG P+Y + L +E+++HR+LWS+ V +
Sbjct: 2 NQLRLGYLYGVGAYLIWGFFPIYLKLLRPAGPVEILAHRILWSVAFVALLLAATRHA-GF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + P+A+ + +A ++AV+WG +IY + + + T+ YF+ P++SV G + L+
Sbjct: 61 LRKLARRPRALAGIGLAAALIAVNWGTYIYGVNSDRVVETALGYFINPLVSVLFGVLVLR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q A + L++ ++T+ G P L+L +A +++ Y +K + + ++EG F+E
Sbjct: 121 ERLRRAQWAALGVGALAVAVLTVDYGRLPWLALTLAFSFAGYGLVKKQLALPATEGLFVE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VLA+PAL Y+ W G F + T L+ G + +F+ R LSTV
Sbjct: 181 SAVLALPALAYLGWLSARGDSTFGHVSAGHTALLVLAGAATAIPLLLFAGAANRLPLSTV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+++Y AP+L + V I +P+ R F +V +A+VV+ + +S + +
Sbjct: 241 GMLQYLAPILQLGCGVLIFHEPMPPARLAGFALVWLALVVFTADALRHSHRTRQA 295
>gi|315501206|ref|YP_004080093.1| rard protein, dmt superfamily transporter [Micromonospora sp. L5]
gi|315407825|gb|ADU05942.1| RarD protein, DMT superfamily transporter [Micromonospora sp. L5]
Length = 308
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 86/294 (29%), Positives = 157/294 (53%), Gaps = 2/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L+ AY++WG P+Y + L +E+++HR+LWS+ V +
Sbjct: 2 NQLRLGYLYGVGAYLIWGFFPIYLKLLRPAGPVEILAHRILWSVAFVALLLAATRHA-GF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + P+A+ + +A ++AV+WG +IY + + + T+ YF+ P++SV G + L+
Sbjct: 61 LRKLARRPRALAGIGLAAALIAVNWGTYIYGVNSDRVVETALGYFINPLVSVLFGVLVLR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q A + L++ ++T+ G P L+L +A +++ Y +K + + ++EG F+E
Sbjct: 121 ERLRRAQWAALGVGALAVAVLTVDYGRLPWLALTLAFSFAGYGLVKKQLALPATEGLFVE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VLA+PAL Y+ W G F + T L+ G + +F+ R LSTV
Sbjct: 181 SAVLALPALAYLGWLSARGDSTFGHVSAGHTALLVLAGAATAIPLLLFAGAANRLPLSTV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G+++Y AP+L + V I +P+ R F +V +A+VV+ + +S + +
Sbjct: 241 GMLQYLAPILQLGCGVLIFHEPMPPARLAGFALVWLALVVFTADALRHSHRTRQ 294
>gi|148655751|ref|YP_001275956.1| transporter DMT superfamily protein [Roseiflexus sp. RS-1]
gi|148567861|gb|ABQ90006.1| RarD protein, DMT superfamily transporter [Roseiflexus sp. RS-1]
Length = 335
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 82/298 (27%), Positives = 156/298 (52%), Gaps = 3/298 (1%)
Query: 14 LSKENASLPTM-MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
S E S P+M G L+ AY WG+ P++ + L+ V LE+++HR++WSL F ++
Sbjct: 21 TSSETESAPSMNRGVLYAAGAYACWGLLPVFWKSLQHVDALEIVAHRIIWSLAF-AFVLL 79
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S + T ++ + + + + +L +W +++A+ TS YF+ P+I+V
Sbjct: 80 TLGRRWSRIGVTWRDRRVLATFLATGMLLTANWFVYVWAVNADHIVETSLGYFINPLINV 139
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVG 191
LG++ LKERL Q +A + + +L +T G P ++L +A T++ Y RKT P+
Sbjct: 140 LLGALVLKERLRIGQGVAMSVALAGVLYLTFQYGSFPWIALILACTFALYGLLRKTAPLD 199
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S +GF +E +L + ++++ + F G+ LI G + + +F+ G
Sbjct: 200 SLDGFTLETALLTPMMIIFLIYRELTVQTAFAHGDPLTWTLLIAAGPITAAPLLLFAAGA 259
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+R L T+G+++Y AP L + V + +P+ R I F ++ A+ +Y ++++
Sbjct: 260 RRVSLVTLGVLQYIAPTLQFLIGVVVYGEPLTPARLIGFVLIWTALAIYTFDSLVHRR 317
>gi|328471321|gb|EGF42220.1| RarD protein [Vibrio parahaemolyticus 10329]
Length = 304
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 149/300 (49%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L AY +WGI P+Y + + QVS LE++SHRV+WS + A+++F
Sbjct: 2 TPEEQQRARQGVLLAVGAYTMWGIAPMYFKSIAQVSPLEILSHRVIWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + K + L+ S+ ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RHWRSVYHIATDKKKIAYLLSSSVLIGGNWLIFIWAVNSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ A +L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 121 MVFLGERLRKLQWFAVVLAGCGVLVQLIVFGSVPIVAMALAMSFGFYGLLRKKVAVDAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E +L A Y+++ S + LI G++ + F+ R
Sbjct: 181 GLFVETLILLPAAAVYLLFIASSPTANMIENPWQLNTLLIAAGVVTTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I + + I F + A+VV+ + N+ +++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGETFTMDKAITFAFIWGALVVFSFDGLRNNRRSRRA 300
>gi|28899782|ref|NP_799387.1| RarD protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260362514|ref|ZP_05775440.1| protein RarD [Vibrio parahaemolyticus K5030]
gi|260877194|ref|ZP_05889549.1| protein RarD [Vibrio parahaemolyticus AN-5034]
gi|260897238|ref|ZP_05905734.1| protein RarD [Vibrio parahaemolyticus Peru-466]
gi|260901370|ref|ZP_05909765.1| protein RarD [Vibrio parahaemolyticus AQ4037]
gi|28808034|dbj|BAC61271.1| RarD protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308088943|gb|EFO38638.1| protein RarD [Vibrio parahaemolyticus Peru-466]
gi|308094137|gb|EFO43832.1| protein RarD [Vibrio parahaemolyticus AN-5034]
gi|308107208|gb|EFO44748.1| protein RarD [Vibrio parahaemolyticus AQ4037]
gi|308112662|gb|EFO50202.1| protein RarD [Vibrio parahaemolyticus K5030]
Length = 304
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 149/300 (49%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L AY +WGI P+Y + + QVS LE++SHRV+WS + A+++F
Sbjct: 2 TPEEQQRARQGVLLAVGAYTMWGIAPMYFKSIAQVSPLEILSHRVIWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + K + L+ S+ ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RHWRSVYHIATDKKKIAYLLSSSVLIGGNWLIFIWAVNSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ A +L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 121 MVFLGERLRKLQWFAVVLAGCGVLVQLIVFGSVPIVAMALAMSFGFYGLLRKKVAVDAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E +L A Y+++ S + LI G++ + F+ R
Sbjct: 181 GLFVETLILLPAAAVYLLFIASSPTANMIENPWQLNTLLIAAGVVTTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I + + I F + A+VV+ + N+ +++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGETFTMDKAITFAFIWGALVVFSFDGLRNNRRSRRA 300
>gi|323494184|ref|ZP_08099299.1| permease [Vibrio brasiliensis LMG 20546]
gi|323311578|gb|EGA64727.1| permease [Vibrio brasiliensis LMG 20546]
Length = 304
Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 151/300 (50%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G AY +WGI P+Y + L +VS LE++SHRV+WS + A+++F
Sbjct: 2 TPEEQQRAKQGVFLAIGAYTMWGIAPIYFKALAEVSPLEILSHRVVWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D LK+ + + LV +A ++ +W FI+A+ S Y++ P+I+V LG
Sbjct: 61 RRWRNVRDVLKSKQKLLYLVTTAILVGANWLIFIWAVNADHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ A L +L+ IP++++A+A+++ Y RK + + +
Sbjct: 121 MLFLGERLRKLQWFAVALAACGVLVQLFVFGSIPVVAIALALSFGFYGLLRKKVSLEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE VL A Y++W + + ++ + LI G++ + F+ R
Sbjct: 181 GLFIETLVLLPAAAIYLLWIADTPTSNIMENSLNLNILLISAGIITTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V + + + I F + A+VV+ + ++ K++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLVYGEAFTADKAITFAFIWGALVVFSFDGLKSNKKSRQA 300
>gi|153839102|ref|ZP_01991769.1| RarD protein [Vibrio parahaemolyticus AQ3810]
gi|149747398|gb|EDM58362.1| RarD protein [Vibrio parahaemolyticus AQ3810]
Length = 304
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 149/300 (49%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L AY +WGI P+Y + + QVS LE++SHRV+WS + A+++F
Sbjct: 2 TPEEQQRARQGVLLAVGAYTMWGIAPMYFKSIAQVSPLEILSHRVIWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + K + L+ S+ ++ +W FI+A+ + S Y++ P+I+V LG
Sbjct: 61 RHWRSVYHIATDKKKIAYLLSSSVLIGGNWLIFIWAVNSNHMLDASLGYYINPLINVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ A +L +L+ + + +P++++A+A+++ Y RK + V +
Sbjct: 121 MVFLGERLRKLQWFAVVLAGCGVLVQLIVFGSVPIVAMALAMSFGFYGLLRKKVAVDAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E +L A Y+++ S + LI G++ + F+ R
Sbjct: 181 GLFVETLILLPAAAVYLLFIASSPTANMIENPWQLNTLLIAAGVVTTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V I + + I F + A+VV+ + N+ +++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLIYGETFTMDKAITFAFIWGALVVFSFDGLRNNRRSRRA 300
>gi|254382419|ref|ZP_04997778.1| rarD [Streptomyces sp. Mg1]
gi|194341323|gb|EDX22289.1| rarD [Streptomyces sp. Mg1]
Length = 363
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G L+ F AY +WG+ PL+ L+ +E+++HR++WSL V A++
Sbjct: 3 AQTEQRTGLLYGFGAYGMWGLVPLFWPLLKPSGAIEILAHRMVWSLAVVGVALLAMRR-W 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+++ L+ P+ + + +A++++V+WG +I+A+ S YF+ P++++ +G +
Sbjct: 62 GWIRELLRRPRKLALTTLAASVISVNWGLYIWAVNNGAVVEASLGYFINPLVTIAIGVLV 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL Q A + + ++L++ + G P +SL +A +++AY +K + +G E
Sbjct: 122 LGERLRRAQWAAVGIGVAAVLVLAIGYGRPPWISLVLAFSFAAYGLIKKKLNMGGVESLA 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E +L +PAL Y++W G G F L + + L GL+ + F R LS
Sbjct: 182 AETALLFLPALGYLLWLGAQGRSTFALDDPGHSWLLAATGLVTAIPLICFGAAAIRVPLS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G+++Y AP+ V + + R F +V +A+ + + + +++ +
Sbjct: 242 TLGLLQYLAPVFQFGLGVVYFHEAMPPERWAGFSLVWVALALLTWDALRTARRSRAR 298
>gi|294814422|ref|ZP_06773065.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294327021|gb|EFG08664.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 393
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 150/292 (51%), Gaps = 2/292 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L+ AY +WG+ PL+ LE +E+++ R++WSL V A++ +++
Sbjct: 52 RAGLLYGIGAYGMWGLVPLFWPLLEPAGAMEILAQRMVWSLVLVVVALLALRR-WQWVRE 110
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L NP+ +G++ +A +++V+WG +I+A+ + S YF+ P++++ +G + L ERL
Sbjct: 111 LLSNPRRLGLITAAAAVISVNWGLYIWAVNNERVIEASLGYFINPLVTIAMGVLLLNERL 170
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+Q A L++L++ + G P +SL +A +++ Y +K + +G E E V
Sbjct: 171 RPVQWAAVATAALAVLVLAVGYGRPPWISLVLAFSFATYGLVKKKVNLGGLESLAAETAV 230
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L +PAL +++W G G F + L G++ + F R LST+G++
Sbjct: 231 LFLPALGFLLWLGSQGEATFATEGVGHATLLALTGVVTAVPLICFGAAAIRVPLSTLGLL 290
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+Y AP+ + V K+ + R F +V +A+ + + + +NK
Sbjct: 291 QYLAPVFQFLLGVLYFKEAMPPERWAGFTLVWLALAMLTWDALRTARRNKAA 342
>gi|65320835|ref|ZP_00393794.1| COG2962: Predicted permeases [Bacillus anthracis str. A2012]
gi|118478806|ref|YP_895957.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis str.
Al Hakam]
gi|228916188|ref|ZP_04079758.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928608|ref|ZP_04091644.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228934833|ref|ZP_04097664.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228947174|ref|ZP_04109468.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123074|ref|ZP_04252281.1| chloramphenicol-sensitive RarD protein [Bacillus cereus 95/8201]
gi|229185792|ref|ZP_04312967.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BGSC 6E1]
gi|118418031|gb|ABK86450.1| possible chloramphenicol-sensitive RarD protein [Bacillus
thuringiensis str. Al Hakam]
gi|228597670|gb|EEK55315.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BGSC 6E1]
gi|228660368|gb|EEL16001.1| chloramphenicol-sensitive RarD protein [Bacillus cereus 95/8201]
gi|228812421|gb|EEM58748.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824733|gb|EEM70534.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830927|gb|EEM76528.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843386|gb|EEM88464.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 328
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 80/315 (25%), Positives = 163/315 (51%), Gaps = 6/315 (1%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWS 63
G ++E + + ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+
Sbjct: 6 GEKREEEKRKMGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWA 63
Query: 64 LPGVFFAI---VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ + F + + K PK + L ++ +++ +W +I+A+
Sbjct: 64 FVFMLIVLGVTKRFRQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEA 123
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWS 179
S Y++ P+IS+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++
Sbjct: 124 SLGYYINPLISILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFG 183
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
Y +K + ++ G +E ++ A+ Y+V G G F ++ TL LIG G++
Sbjct: 184 LYGLTKKLLNYDATIGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMSSTLLLIGAGIV 243
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ F+ G + L VG ++Y AP + ++ VF+ + + I F + +A+ V
Sbjct: 244 TALPLFYFAKGAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFV 303
Query: 300 YLLPTVINSGKNKTK 314
+ + + + K
Sbjct: 304 FSVAKTKFLVQKQPK 318
>gi|330465222|ref|YP_004402965.1| rard protein, dmt superfamily transporter [Verrucosispora maris
AB-18-032]
gi|328808193|gb|AEB42365.1| rard protein, dmt superfamily transporter [Verrucosispora maris
AB-18-032]
Length = 306
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 86/295 (29%), Positives = 161/295 (54%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P +G L+ F AY++WG PLY + L LE+++HRV+WS+ V + +
Sbjct: 2 TPLRLGYLYGFAAYLMWGFFPLYFKLLRPAGPLEILAHRVVWSVAFVALLLGAMR-NIGF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ L+ P+A+ + +A ++ ++W +IY + + + T+ YF+ P++ V LG L+
Sbjct: 61 LRALLRRPRALAGIAAAAVLIGLNWFTYIYGVNSDRVVETALGYFINPLVVVLLGVAVLR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q A + L++ ++T+ G P ++L +A+T+ Y +K + + ++EG F+E
Sbjct: 121 ERLRPAQWCALGIGGLAVAVLTVDYGQLPYIALILALTFGGYSLVKKQLGLPAAEGLFVE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VLA+PAL Y+ W +G F + TL L+ G L + +F+ R LS++
Sbjct: 181 SAVLALPALGYLGWLAATGEMAFGQVSTGHTLLLVIAGALTAIPLLLFAGAANRLPLSSL 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+++Y AP+L + V I +P+ R F +V +A++V+ + + + + +
Sbjct: 241 GMLQYVAPILQLGCGVLIFHEPMPPARLAGFALVWLALIVFTADGLRQARRTRRQ 295
>gi|302536195|ref|ZP_07288537.1| RarD protein [Streptomyces sp. C]
gi|302445090|gb|EFL16906.1| RarD protein [Streptomyces sp. C]
Length = 351
Score = 125 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 79/295 (26%), Positives = 151/295 (51%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G L+ F AY +WG+ PL+ L+ +E+++HR++WSL V A++
Sbjct: 12 AENEQRTGLLYGFGAYGMWGLVPLFWPLLKPSGAIEILAHRMVWSLAVVGVALLALRR-W 70
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + + ++ P+ +G+ +A +++V+WG +I+A+ Q S YF+ P++++ +G +
Sbjct: 71 SWIGEIVRQPRKLGLTALAAAVISVNWGLYIWAVNNGQVVEASLGYFINPLVTIAIGVLV 130
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL Q A + ++L++++ G P +SL +A +++AY +K + +G E
Sbjct: 131 LGERLRRAQWAAVGIGFAAVLVLSVGYGRLPWISLTLAFSFAAYGLIKKKLDMGGLESLA 190
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E + +PAL Y+VW G G F + + L GL+ + F R LS
Sbjct: 191 AETALQFLPALGYLVWLGVQGRSTFTAEGLGHSALLAATGLVTAIPLVCFGAAAIRVPLS 250
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+G+++Y AP+ V + + R F +V A+V+ + + +++
Sbjct: 251 TLGLLQYLAPVFQFALGVVYFHEAMPPERWAGFSLVWAALVLLTWDALRTARRSR 305
>gi|323499631|ref|ZP_08104599.1| permease [Vibrio sinaloensis DSM 21326]
gi|323315232|gb|EGA68275.1| permease [Vibrio sinaloensis DSM 21326]
Length = 304
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 81/302 (26%), Positives = 154/302 (50%), Gaps = 2/302 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L AY +WGI P+Y + + +VS LE++SHRV+WS + +++
Sbjct: 2 TPEEQQRARQGILLAIGAYTMWGIAPIYFKTISEVSPLEILSHRVVWSFV-LLAFLLHLG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D +K+ K +G L+ ++ ++ +W FI+A+ S Y++ P+I+V LG
Sbjct: 61 RRWRGVRDVIKSKKKMGFLLSTSILVGANWLIFIWAVNANHMLDASLGYYINPLINVVLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ A L +L+ + G +P++++A+A+++ Y RK + + +
Sbjct: 121 MLFLGERLRKLQWFAVALAACGVLVQLIAFGSVPVVAIALALSFGFYGLLRKKVSLEAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE ++ A Y++W S + + + L LI G++ + F+ R
Sbjct: 181 GLFIETLIMLPAAAVYLLWIADSSTSNLMVNPMTLNLLLIAAGIVTTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V + + + + I F + A++V+ + + +++
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWGALLVFSFDGLKTNRQSRKA 300
Query: 315 KS 316
S
Sbjct: 301 VS 302
>gi|145592960|ref|YP_001157257.1| transporter DMT superfamily protein [Salinispora tropica CNB-440]
gi|145302297|gb|ABP52879.1| RarD protein, DMT superfamily transporter [Salinispora tropica
CNB-440]
Length = 321
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/291 (30%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P +G L+ AY+LWG PLY + L S LE+++HR++WS+ V + S
Sbjct: 2 TPRKLGYLYGIGAYVLWGFFPLYMRLLRPASPLEILAHRIVWSVVFVALVLAAMR-NRSF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ L+ P+A+ L +A ++A++WG +IY + + + TS YFV P++ V LG L+
Sbjct: 61 LRALLRRPRALAALGIAAALVALNWGTYIYGVNSERVVETSLGYFVNPLVVVLLGVFVLR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q A + +++++T+ G P ++ T++ Y +K + + +++G F+E
Sbjct: 121 ERLRPAQWAAIGVGGAAVVVLTVDYGRPPYLALVLSFTFAGYGLVKKRLGLPAAQGLFVE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VLA+PAL Y+ W G +GG F + T LI G + +F+ R +++
Sbjct: 181 SAVLALPALAYLAWLGGTGGATFGAVSAGHTALLISAGAATAIPLLMFAGAANRLPFTSL 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G+++Y AP+L + V I ++P+ R F +V +A+ V+ + V + +
Sbjct: 241 GMLQYLAPILQLGCGVIIFREPMPPARLAGFALVWLALAVFTVDAVRAARR 291
>gi|328884343|emb|CCA57582.1| Protein rarD [Streptomyces venezuelae ATCC 10712]
Length = 334
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 145/295 (49%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G L+ AY +WG+ PL+ L+ +E+++HR++WSL V A++
Sbjct: 3 TENEERAGLLYGIGAYGMWGLVPLFWPLLKPAGSVEILAHRMVWSLVFVGIALLAVRR-W 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+++ +++P+ +GM+ +A ++ V+WG +I+++ T S YF+ P++++ LG +
Sbjct: 62 GWVRELVRSPRKLGMITVAAAVITVNWGLYIWSVNTGHVVEASLGYFINPLVTIALGVLV 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFF 197
L+ERL Q A + ++L++ + G P +A +++ Y +K + +G E
Sbjct: 122 LQERLRPAQWAAVGIGFAAVLVLAIGYGQPPWISLTLAFSFALYGLVKKKVNIGGLESLA 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E V +PAL Y+VW G G F T L G++ + F R LS
Sbjct: 182 AETAVQFLPALAYLVWLGGQGTLAFGSYGAGHTALLTATGIVTAVPLVCFGAAAIRVPLS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+G+++Y AP + V + + R F +V +A+ + + + +++
Sbjct: 242 TLGLLQYLAPTFQFLLGVLYFHEEMPPERWAGFSLVWLALTILTWDALRTARRSR 296
>gi|312881432|ref|ZP_07741227.1| permease [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370914|gb|EFP98371.1| permease [Vibrio caribbenthicus ATCC BAA-2122]
Length = 299
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ G + AY +WG+ P+Y + L VS LE++SHRV WS + +++
Sbjct: 2 TQDDQQKAKQGVILAVAAYTMWGVAPIYFKALGDVSPLEILSHRVFWSF-FLLAILLHVG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++D K PK + +L +A I+A +W FI+A+ S Y++ P+++V LG
Sbjct: 61 RRWRSVRDVFKTPKKLLLLACTAIIVAANWLIFIWAVNADHMLDASLGYYINPLLNVLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ +A L +L+ + + IP++++A+A+T+ Y RK I + +
Sbjct: 121 MLFLGERLRKLQWVAVFLASCGVLVQLLVFGSIPIVAIALALTFGFYGLVRKKINLEAVA 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE VL A Y+ + + + L L+ G++ + F+ R
Sbjct: 181 GLFIETLVLLPVAAIYLGFIADTPTSQLSHNSWSLNLLLVSAGIVTTLPLLCFTGAATRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K ST+G +Y P LM + +V I ++P + + I F + +A+V++ + N+ +
Sbjct: 241 KFSTLGFFQYIGPSLMFILAVSIYQEPFTSDKAITFAFIWLALVLFSFDGLRNTKRR 297
>gi|149191370|ref|ZP_01869622.1| RarD protein [Vibrio shilonii AK1]
gi|148834787|gb|EDL51772.1| RarD protein [Vibrio shilonii AK1]
Length = 303
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 2/298 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L AY +WGI P+Y + L +VS LE++SHRV+WS + A+++F
Sbjct: 6 QQKAKQGVLLAIGAYTMWGIAPIYFKALSEVSPLEILSHRVIWSF-FLLTALLHFGRRWR 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++D ++ K +G L+ +A ++ V+W FI+A+ S Y++ P+I+V LG +FL
Sbjct: 65 SVRDVFRSKKKMGYLITTALLVGVNWLIFIWAVNANHMLDASLGYYINPLINVILGMLFL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ A L + +LI + G +P+++LA+A+++ Y RK + + + G FI
Sbjct: 125 GERLRKLQWFAVALATIGVLIQLIAFGSVPIVALALAMSFGLYGLLRKKVSLDAQTGLFI 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E V+ A YV++ + + + LI G++ + F+ R KLST
Sbjct: 185 ETLVMLPAAAIYVLFIASTPTSNMLANPATLNILLISAGIVTTLPLLCFTGAATRLKLST 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+G +Y P LM + +V + + + + FG + A+VV+ + S NK +
Sbjct: 245 LGFFQYIGPSLMFLLAVLVYGEAFTLDKALTFGFIWGALVVFSFDGIKTSRTNKRINA 302
>gi|254508585|ref|ZP_05120702.1| RarD protein [Vibrio parahaemolyticus 16]
gi|219548527|gb|EED25535.1| RarD protein [Vibrio parahaemolyticus 16]
Length = 304
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L AY +WGI P+Y + + VS LE++SHRV+WS + +++
Sbjct: 6 QQRARQGVLLAIGAYTMWGIAPIYFKTISDVSPLEILSHRVVWSFV-LLAFLLHIGRRWR 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++D L++ K + L+ ++ ++ V+W FI+A+ S Y++ P+I+V LG +FL
Sbjct: 65 GVRDVLRSKKKMAFLISTSLLVGVNWLIFIWAVNANHMLDASLGYYINPLINVLLGMLFL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ A +L +L+ + G +P +++A+A+++ Y RK + + + G FI
Sbjct: 125 GERLRKLQWFAVVLAACGVLVQLIAFGSVPTVAIALALSFGFYGLLRKKVSLDAQTGLFI 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E ++ A Y+VW S + L LI G++ + F+ R KLST
Sbjct: 185 ETLIMLPAAAIYLVWIADSATSDLLSNPMTLNLLLISAGVITTLPLLCFTGAATRLKLST 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G +Y P LM + +V + + + I F + A+V++ + + + +
Sbjct: 245 LGFFQYIGPSLMFLLAVLVYGEAFTADKAITFAFIWGALVIFSFDGLKTNRQTRKA 300
>gi|37681372|ref|NP_935981.1| RarD protein [Vibrio vulnificus YJ016]
gi|37200124|dbj|BAC95952.1| RarD protein [Vibrio vulnificus YJ016]
Length = 304
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L AY +WGI P+Y + L VS LE++SHRV+WS + A+++F
Sbjct: 6 QQKARQGVLLALGAYTMWGIAPIYFKSLAAVSPLEILSHRVVWSF-FLLAALLHFGRHWR 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++D L + + LV +A ++ +W FI+A+ S Y++ P+I+V LG +FL
Sbjct: 65 TVRDVLTSKSKMLYLVTTAILVGANWLIFIWAVNANHMLDASLGYYINPLINVLLGMLFL 124
Query: 140 KERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ A L +L+ + + +P++++A+A ++ Y RK + V + G FI
Sbjct: 125 GERLRKLQWFAVTLAACGVLVQLVVFGSVPIVAIALAFSFGFYGLLRKKVSVDAQTGLFI 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E V+ A Y+++ + + L LI G++ + F+ R KLST
Sbjct: 185 ETLVMLPAAAIYLLFIADTPTSNMLANPSQLNLLLIAAGVVTTLPLLCFTGAATRLKLST 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V I + T + + F + A+VV+ + ++
Sbjct: 245 LGFFQYIGPSLMFLLAVLIYGEAFTTDKALTFAFIWGALVVFSFDGLRYRRNSRK 299
>gi|320157769|ref|YP_004190148.1| protein rarD [Vibrio vulnificus MO6-24/O]
gi|319933081|gb|ADV87945.1| protein rarD [Vibrio vulnificus MO6-24/O]
Length = 304
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L AY +WGI P+Y + L VS LE++SHRV+WS + A+++F
Sbjct: 6 QQKARQGVLLALGAYTMWGIAPIYFKSLAAVSPLEILSHRVVWSF-FLLAALLHFGRHWR 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++D L + + LV +A ++ +W FI+A+ S Y++ P+I+V LG +FL
Sbjct: 65 TVRDVLTSKSKMLYLVTTAILVGANWLIFIWAVNANHMLDASLGYYINPLINVLLGMLFL 124
Query: 140 KERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ A L +L+ + + +P++++A+A ++ Y RK + V + G FI
Sbjct: 125 GERLRKLQWFAVTLAACGVLVQLVVFGSVPIVAIALAFSFGFYGLLRKKVSVDAQTGLFI 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E V+ A Y+++ + + L LI G++ + F+ R KLST
Sbjct: 185 ETLVMLPAAAIYLLFIADTPTSNMLANPSQLNLLLIAAGVVTTLPLLCFTGAATRLKLST 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V I + + + + F + A+VV+ + ++
Sbjct: 245 LGFFQYIGPSLMFLLAVLIYGEAFTSDKALTFAFIWGALVVFSFDGLRYRRNSRK 299
>gi|226326680|ref|ZP_03802198.1| hypothetical protein PROPEN_00533 [Proteus penneri ATCC 35198]
gi|225204901|gb|EEG87255.1| hypothetical protein PROPEN_00533 [Proteus penneri ATCC 35198]
Length = 324
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 81/297 (27%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ TM G L AY++WGI P+Y + +++V E+++HR+LWS + + S
Sbjct: 29 SQKNTMKGVLCALGAYLIWGIAPVYFKSIQEVPAEEILTHRILWSFFFMLILMTI-SRHW 87
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ ++ PK + +L +A I+A +W +I+A+ S YF+ P+++V G +F
Sbjct: 88 PYLRQLIRQPKKILLLALTAIIIATNWLTYIWAVNHGYMLEASLGYFINPLVNVLFGMLF 147
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER +Q IA L + I H G P++ L++AVT+ Y RK + V + G
Sbjct: 148 LSERFRRMQWIAVGLAFTGVFIQLWHFGSVPVIGLSLAVTFGLYGLLRKKLGVDAQTGML 207
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E L AL Y+++ S + + LI G++ + +F+ +LS
Sbjct: 208 VETLWLFPVALVYILFFTHSPTSNMLENSWSLNTLLIAAGIITTVPLLLFTEAAHHLRLS 267
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y P LM + + + + ID R + FG + +A++++ L + + +
Sbjct: 268 TLGFFQYIGPTLMFILATMVYGEQIDAERLVTFGFIWVALILFTLDALYTQRRLRRS 324
>gi|120601854|ref|YP_966254.1| transporter DMT superfamily protein [Desulfovibrio vulgaris DP4]
gi|120562083|gb|ABM27827.1| RarD protein, DMT superfamily transporter [Desulfovibrio vulgaris
DP4]
gi|311234534|gb|ADP87388.1| RarD protein, DMT superfamily transporter [Desulfovibrio vulgaris
RCH1]
Length = 300
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 85/298 (28%), Positives = 148/298 (49%), Gaps = 2/298 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
S S + G + A+ LWG+ PLY + L V E++ HR+LWS + +V+
Sbjct: 3 SAPVTSDTSRKGLVAGLGAFALWGLLPLYWKQLLDVPPFEILCHRILWSFVFLLPVVVFS 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ ++ +++ + + S ++ +W +I+A+ T TS Y++ P+++V L
Sbjct: 63 GR-WAEVRAAVRDRGTLLRVACSGLLVGFNWYLYIWAVNTGHVLETSLGYYINPLMNVAL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G VFL+ER + LQ+ A L +L M G P ++L +A ++S Y F RKT+ V S
Sbjct: 122 GCVFLRERPSRLQVAAIALAAFGVLWMLAGYGRFPWVALTLAGSFSLYGFMRKTVKVASV 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G FIE +LA ++V GG F L L+G G+ S F++ +
Sbjct: 182 PGLFIETSILAPFVAVWLVRLHLGGGGAFMHLAPTTDLLLMGAGVATSTPLIWFAFAARS 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+L+TVG+++Y AP L + VF+ +P+ + FG + A+ +Y + +
Sbjct: 242 LRLTTVGVLQYLAPTLAFMLGVFVFHEPLTPSHLVTFGCIWGALALYTIEGWRALHRK 299
>gi|188585494|ref|YP_001917039.1| RarD protein, DMT superfamily transporter [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179350181|gb|ACB84451.1| RarD protein, DMT superfamily transporter [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 309
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 86/298 (28%), Positives = 156/298 (52%), Gaps = 2/298 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G AYILWG+ PLY L+QV +V++HR+ WS V F + +
Sbjct: 3 ANEAKKGVFLGLSAYILWGLLPLYWDLLDQVPAEQVLAHRIFWSCFFVGFIVCI-NKNWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + K+ + + + + +A +++ +W +I+ + + S Y++ P+++V LG + L
Sbjct: 62 MVGNIFKSRRNLAITLLAAVVISANWFTYIWGVQANRVVEASMGYYINPLVAVMLGVLVL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KE+L+ + I+ + L +L+MT G P ++L +A T++ Y +KTIPV G F+
Sbjct: 122 KEKLSTTKKISVAIATLGVLVMTFSYGQFPWVALVLAFTFAFYGLIKKTIPVDPIPGLFL 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E +LA L Y+ ++ G + L L+G G+ S +FS ++ KLST
Sbjct: 182 ETAILAPIVLAYLTFHEVQGTGALGDAPLHLILLLMGAGVATSTPLLLFSMAARKVKLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
VG M+Y +P L + VFI +P ++ FG + IA+ +Y +V +++ K+
Sbjct: 242 VGFMQYISPTLSLYLGVFIFNEPFTSIHLFTFGCIWIALALYTWDSVKTYRESRNMKA 299
>gi|59710676|ref|YP_203452.1| chloramphenical resistance permease [Vibrio fischeri ES114]
gi|59478777|gb|AAW84564.1| predicted chloramphenical resistance permease [Vibrio fischeri
ES114]
Length = 371
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 89/298 (29%), Positives = 155/298 (52%), Gaps = 2/298 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ T G LF AY +WGI P+Y + + +VS LE++SHRV+WS + A++ F
Sbjct: 73 TTTLEQQRTRQGVLFALGAYTIWGIAPIYFKTISEVSPLEILSHRVIWSFFFL-AALLSF 131
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
S G + + +TLK+ K + L+ ++ ++ +W FI+A+ S Y++ P+++V L
Sbjct: 132 SKGWATVINTLKDKKKMTYLITTSVLIGANWLIFIWAVNAGHMLDASLGYYINPLLNVVL 191
Query: 135 GSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G +FL ERL LQ +A L +LI + IP++++A+A ++ Y RK + + +
Sbjct: 192 GMIFLGERLRRLQWVAVLFASAGVLIQLITFGSIPVVAIALACSFGFYGLLRKKVAMDAQ 251
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G FIE V+ L Y+++ S +F + L LI G++ + F+ R
Sbjct: 252 TGLFIETLVMLPLTLIYLLFIADSATSNFSENTLNLNLLLIAAGIITTVPLLCFTGAATR 311
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
KLST+G +Y P LM + +V + + + I FG + A+V++ + K
Sbjct: 312 LKLSTLGFFQYIGPSLMFLLAVGLYGEEFSADKAITFGFIWGALVIFTTDAFMARNKK 369
>gi|329938307|ref|ZP_08287758.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329302796|gb|EGG46686.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 342
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/291 (26%), Positives = 148/291 (50%), Gaps = 2/291 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G F AY +WG+ PL+ L+ +E+++HR++WSL V A++ +
Sbjct: 15 ESRAGLFNGFAAYGMWGLVPLFWPLLKPAGAVEILAHRMVWSLGIVGVALLVMRR-WAWA 73
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L++P+ +G++ +A ++ V+WG +I+A+ + S YF+ P++++ +G + LKE
Sbjct: 74 GELLRSPRRLGLVTIAAAVITVNWGVYIWAVNSGHVVEASLGYFINPLVTIAMGVLLLKE 133
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL Q A + L+++++T+ G P +SL +A +++ Y +K + +G E E
Sbjct: 134 RLRTAQWAAVGIGALAVVVLTVGYGRPPWVSLCLAFSFATYGLVKKKVNLGGIESLAAET 193
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V +PAL Y++W G GG F L GL+ + F R LST+G
Sbjct: 194 AVQFLPALAYLLWLGAHGGSTFASHGFGHAALLAAAGLVTALPLVCFGAAAIRVPLSTLG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+++Y P+ + + + + R F +V A+V+ + + ++
Sbjct: 254 LLQYLTPVFQFLLGILYFHEEMPPERWAGFVLVWAALVLLTWDALRTARRS 304
>gi|145301003|ref|YP_001143844.1| rarD protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142853775|gb|ABO92096.1| rarD protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 300
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ CAY LWG+ P+Y + L V E+++HR++WS + +
Sbjct: 2 QQQVQRQGIIYALCAYTLWGLAPIYFKTLSAVPAAEILTHRMIWSCV-LLMVLTLLGRQW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ L+ PK + L F++ + +W FI+A+ S Y++ P+ +V LG +F
Sbjct: 61 HKVQAVLRQPKVLLTLAFTSVTVGGNWLLFIWAINNGHMLDASLGYYINPLFNVLLGMLF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E+L LQ A L ++ + + + G P ++L +A +++ Y RK + + + G
Sbjct: 121 LSEQLRRLQWWAVGLAVIGVTVQLIAFGSLPWIALVLASSFAIYGLIRKKLALDALTGLL 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE ++ PA Y+ S H + L LI G + + F+ R KLS
Sbjct: 181 IETMIMLPPAAIYLWGFADSPTSHMTENDWHLNLLLIAAGAVTTAPLLCFTAAATRLKLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y P LM + +V + + + + I FG + A+V++ L + + + +
Sbjct: 241 TLGFFQYIGPSLMFILAVTLYGEALTPDKLITFGCIWSALVLFSLDGLRSGKRRRAA 297
>gi|27364386|ref|NP_759914.1| protein rarD [Vibrio vulnificus CMCP6]
gi|27360505|gb|AAO09441.1| Protein rarD [Vibrio vulnificus CMCP6]
Length = 304
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L AY +WGI P+Y + L VS LE++SHRV+WS + A+++F
Sbjct: 6 QQKARQGVLLALGAYTMWGIAPIYFKSLAAVSPLEILSHRVVWSF-FLLAALLHFGRHWR 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++D L + + LV +A ++ +W FI+A+ S Y++ P+I+V LG +FL
Sbjct: 65 TVRDVLTSKSKMLYLVTTAILVGANWLIFIWAVNANHMLDASLGYYINPLINVLLGMLFL 124
Query: 140 KERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ A L +L+ + + +P++++A+A ++ Y RK + V + G FI
Sbjct: 125 GERLRKLQWFAVTLAACGVLVQLIVFGSVPIVAIALAFSFGFYGLLRKKVSVDAQTGLFI 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E V+ A Y+++ + + L LI G++ + F+ R KLST
Sbjct: 185 ETLVMLPAAAIYLLFIAATPTSNVLANPSQLNLLLIAAGVVTTLPLLCFTGAATRLKLST 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V I + + + + F + A+VV+ + ++
Sbjct: 245 LGFFQYIGPSLMFLLAVLIYGEAFTSDKALTFAFIWGALVVFSFDGLRYRRNSRK 299
>gi|227357152|ref|ZP_03841521.1| DMT superfamily drug/metabolite transporter [Proteus mirabilis ATCC
29906]
gi|227162684|gb|EEI47651.1| DMT superfamily drug/metabolite transporter [Proteus mirabilis ATCC
29906]
Length = 324
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 80/297 (26%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T+ G L AY++WGI P+Y + +++V E+++HR+LWS + +
Sbjct: 29 SQKNTLKGVLCALGAYLIWGIAPVYFKSIQEVPAEEILTHRILWSFFFMLLLMSITR-HW 87
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ ++ PK V ML +A I+A +W +I+A+ S YF+ P+++V G +F
Sbjct: 88 PYLRQLVRQPKKVLMLALTAVIIASNWLIYIWAVNHGFMLEASLGYFINPLVNVLFGMIF 147
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER +Q A L + I G P++ L++AVT+ Y RK + V + G
Sbjct: 148 LGERFRRMQWFAVSLAFTGVFIQLWQFGSVPVIGLSLAVTFGLYGLLRKKLGVDAQTGMT 207
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE L AL Y+++ S + + LI G++ + +F+ + +LS
Sbjct: 208 IETLWLFPVALVYILFFTHSPTSNMLENSWSLNTLLIAAGVITTVPLLLFTEAAQHLRLS 267
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y P LM + + + + ID R + FG + +A++++ L + + +
Sbjct: 268 TLGFFQYIGPTLMFILATMVYGEQIDAERLVTFGFIWVALILFTLDALYTQQRLRRS 324
>gi|227114717|ref|ZP_03828373.1| hypothetical protein PcarbP_17230 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 309
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 75/295 (25%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P+Y + LE V E+++HR++WS + ++
Sbjct: 3 AQQTREGIFFALGAYFIWGIAPVYFKLLEHVPPNEILTHRIIWSFFFM-LILLTIGRKWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K +N + +L +A ++ +W +I+A+ S YF+ P+++V LG +FL
Sbjct: 62 QVKLACRNVNHLFLLALTAVLIGGNWLLYIWAVNNHHMLEASLGYFINPLVNVMLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A LL + +L+ G P+++L +A +++ Y RK I + G I
Sbjct: 122 GERFRRLQWLAVLLAVTGVLVQLWTFGSLPVIALGLAFSFALYGLLRKKIGIDGQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A+ Y+ + + H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAVIYLFFIADTPSSHLTANPWSLNLLLLSAGIVTTVPLLFFTAAAMRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P +M + +V + + + I F + A+ +++L + K +
Sbjct: 242 LGFFQYLGPTIMFILAVVFYGETFSSDKLITFAFIWGALALFILDALYTQRKLRR 296
>gi|261823382|ref|YP_003261488.1| RarD protein, DMT superfamily transporter [Pectobacterium wasabiae
WPP163]
gi|261607395|gb|ACX89881.1| RarD protein, DMT superfamily transporter [Pectobacterium wasabiae
WPP163]
Length = 309
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P+Y + LE V E+++HR++WS + ++
Sbjct: 3 AQQTREGIFFALGAYFIWGIAPVYFKLLEHVPPNEILTHRIIWSFFFM-LILLTVGRKWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +N K + +L +A ++ +W +I+A+ S YF+ P+++V LG +FL
Sbjct: 62 QVSYACRNIKHLFLLALTAVLIGGNWLLYIWAVNNHHMLEASLGYFINPLVNVMLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A LL + +L+ G P+++L +A +++ Y RK I + G I
Sbjct: 122 GERFRRLQWLAVLLAVTGVLVQLWTFGSLPVIALGLAFSFALYGLLRKKIGIDGQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A+ Y+ + + H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAVVYLFFIADTPSSHLTANPWTLNLLLLSAGIVTTVPLLFFTSAAMRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P +M + +V + + + I F + A+V+++L + K +
Sbjct: 242 LGFFQYLGPTIMFILAVVFYGETFSSDKLITFAFIWGALVLFILDALYTQRKLRR 296
>gi|56461649|ref|YP_156930.1| membrane protein RarD [Idiomarina loihiensis L2TR]
gi|56180659|gb|AAV83381.1| Conserved membrane protein RarD [Idiomarina loihiensis L2TR]
Length = 311
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 82/295 (27%), Positives = 150/295 (50%), Gaps = 2/295 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G F AY WGI P+Y + ++QV LE++SHR++W+ VF IV L +
Sbjct: 7 RARQGVFFALAAYTFWGIAPVYFKLVKQVPALEILSHRIIWAFLMVFVLIVAMKR-LDRI 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ LK+ K V L + +L +W FI+A+ + S Y++ P+++V +G VF E
Sbjct: 66 RPILKSRKLVLRLTLATCLLGGNWFLFIWAVNSNHMLDASLGYYINPLLNVAIGMVFFAE 125
Query: 142 RLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R+ LQ++A + ++ + I + +P ++LA+A +++ Y RK +PV S G ++E
Sbjct: 126 RMRRLQLVAIAMAVVGVTIQIVTFGSVPWVALALASSFAIYGAIRKRLPVDSISGLWLET 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L L Y+ S L L+ GL+ + F+ +R + +T+G
Sbjct: 186 AILFPVMLIYLFVFAESASSDLTANPWTLNLLLVAAGLVTTIPLLCFTAAAQRLRYATLG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y AP LM +V + +P++ + + F I+ A+ +Y ++I +++ K
Sbjct: 246 FFQYIAPTLMFALAVVVYGEPLEESKLVTFIIIWSALALYSFDSIIQRQRDRKAK 300
>gi|253690328|ref|YP_003019518.1| RarD protein, DMT superfamily transporter [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756906|gb|ACT14982.1| RarD protein, DMT superfamily transporter [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 309
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P+Y + LE V E+++HR++WS + ++
Sbjct: 3 AQQTREGIFFALGAYFIWGIAPVYFKLLEHVPPNEILTHRIIWSFFFM-LILLTIGRKWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +N K + +L +A ++ +W +I+A+ S YF+ P+++V LG +FL
Sbjct: 62 QVSYACRNVKHLFLLALTAVLIGGNWLLYIWAVNNHHMLEASLGYFINPLVNVMLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A LL + +L+ G P+++L +A +++ Y RK I + G I
Sbjct: 122 GERFRRLQWLAVLLAVTGVLVQLWTFGSLPVIALGLAFSFALYGLLRKKIGIDGQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A+ Y+ + + H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAVIYLFFIADTPSSHLTANPWSLNLLLLSAGIVTTVPLLFFTAAAMRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P +M + +V + + + + F + A+ +++L + K +
Sbjct: 242 LGFFQYLGPTIMFLLAVVFYGETFSSDKLVTFAFIWGALGLFILDALYTQRKLRR 296
>gi|48428339|sp|P83936|RARD_STREX RecName: Full=Protein rarD
gi|34499901|gb|AAQ73536.1| RarD [Streptomyces exfoliatus]
Length = 315
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 82/297 (27%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G L+ F AY +WG+ PL+ L+ +E+++HR++WSL V A++
Sbjct: 3 AENEQRTGLLYGFGAYGMWGLVPLFWPLLKPSGAVEILAHRMVWSLAVVGLALLALRR-W 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+++ L+NP+ +G+ +A++++V+WG +I+++ S YF+ P++S+ +G +
Sbjct: 62 GWIRELLRNPRKLGLTALAASVISVNWGLYIWSVNNEHVVEASLGYFINPLVSIAIGVLV 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL Q +A L +++L++ + G P +SL +A +++ Y +K + +G E
Sbjct: 122 LGERLRRAQWVAVGLSFVAVLVLAIGYGRPPWISLVLAFSFATYGLIKKKLNMGGLESLA 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E VL +PAL YV+W G G F + L L GL+ + F R LS
Sbjct: 182 AETAVLFLPALGYVLWLGAQGQSTFAAHGVGHALLLAATGLVTAIPLVFFGMAAIRVPLS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G+++Y AP+ V + + R F +V A+V+ + + +++ +
Sbjct: 242 TLGLLQYMAPVFQFGLGVLYFHEAMPPERWAGFSLVWAALVILTWDALRTARRSRAR 298
>gi|46580830|ref|YP_011638.1| rarD protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46450250|gb|AAS96898.1| rarD protein [Desulfovibrio vulgaris str. Hildenborough]
Length = 295
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/294 (28%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S + G + A+ LWG+ PLY + L V E++ HR+LWS + +V+
Sbjct: 2 TSDTSRKGLVAGLGAFALWGLLPLYWKQLLDVPPFEILCHRILWSFVFLLPVVVFSGR-W 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ ++ +++ + + S ++ +W +I+A+ T TS Y++ P+++V LG VF
Sbjct: 61 AEVRAAVRDRGTLLRVACSGLLVGFNWYLYIWAVNTGHVLETSLGYYINPLMNVALGCVF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ER + LQ+ A L +L M G P ++L +A ++S Y F RKT+ V S G F
Sbjct: 121 LRERPSRLQVAAIALAAFGVLWMLAGYGRFPWVALTLAGSFSLYGFMRKTVKVASVPGLF 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE +LA ++V GG F L L+G G+ S F++ + +L+
Sbjct: 181 IETSILAPFVAVWLVRLHLGGGGAFMHLAPTTDLLLMGAGVATSTPLIWFAFAARSLRLT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
TVG+++Y AP L + VF+ +P+ + FG + A+ +Y + +
Sbjct: 241 TVGVLQYLAPTLAFMLGVFVFHEPLTPSHLVTFGCIWGALALYTIEGWRALHRK 294
>gi|271502375|ref|YP_003335401.1| RarD protein, DMT superfamily transporter [Dickeya dadantii Ech586]
gi|270345930|gb|ACZ78695.1| RarD protein, DMT superfamily transporter [Dickeya dadantii Ech586]
Length = 308
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 141/297 (47%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF AYILWG+ P+Y + + QV E++ HR++WS ++
Sbjct: 3 SMPQHRQGVLFALGAYILWGVAPIYFKQIRQVPANEILGHRIIWSFFF-MLLLLTLCRNW 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+++ + P+ + +L +A ++A +W +I+A+ S YF+ P++SV LG +F
Sbjct: 62 GAVRNACRQPRQLLLLAITAILVACNWLTYIWAVNHNHMLEASLGYFINPLVSVLLGMLF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER Q +A LL + +L+ G P+++L +A ++ Y RK I + G
Sbjct: 122 LGERFRPTQWLAMLLAVCGVLVQLWTLGSLPVIALTLAFSFGVYGLLRKKIAIDGQTGML 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E L AL Y+ W S F + L L+ G++ + +F+ R +LS
Sbjct: 182 FETLWLLPAALIYLEWLADSPTSQFSQNPLSLNLLLMASGVVTTVPLLLFTAAAVRLRLS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y AP L + ++ + + I R + F + +A+ V+ + + +
Sbjct: 242 TLGFFQYLAPTLTFLLAILVYGETITPDRLVTFAFIWLALGVFTFDALYTQRRLRRA 298
>gi|320009175|gb|ADW04025.1| RarD protein, DMT superfamily transporter [Streptomyces
flavogriseus ATCC 33331]
Length = 328
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 75/295 (25%), Positives = 147/295 (49%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L+ AY +WG+ PL+ LE +E+++HR++WSL V A++ +
Sbjct: 4 KNEQRAGLLYGIGAYGMWGLVPLFWPLLEPSGAVEILAHRMVWSLGVVGIALLVLRR-WA 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L+ P+ +G++ +A +++V+WG +I+++ S YF+ P++++ +G + L
Sbjct: 63 WIGELLRQPRRLGLIAIAAAVISVNWGLYIWSVNNGHVVEASLGYFINPLVTIAMGVLLL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL Q A ++L++ + G P +SL +A +++ Y A+K + +G E
Sbjct: 123 GERLRPAQWAAVTTGFAAVLVLAIGYGQPPWISLVLAFSFATYGLAKKKVNMGGLESLAA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E VL +PAL +++W G SG F G L GL+ + F R LS
Sbjct: 183 ETAVLFVPALGFLLWLGASGDATFLSGGAGHGALLAATGLVTAIPLVCFGAAAIRVPLSV 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G+++Y AP+ + + + R F +V +A+++ + + + +
Sbjct: 243 LGLLQYLAPVFQFALGILYFHEAMPPERWAGFALVWVALILLTWDALRTARRTRA 297
>gi|91791697|ref|YP_561348.1| rarD protein [Shewanella denitrificans OS217]
gi|91713699|gb|ABE53625.1| rarD protein [Shewanella denitrificans OS217]
Length = 300
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 2/299 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L G + CAY LWG+ PLY + ++QVS LE++ HRVLWS + + + G
Sbjct: 2 SELEYRKGVILAICAYCLWGVAPLYFKLIQQVSPLEILMHRVLWSFVLMVVLMQFVGG-F 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S L+ K PK + +L+ ++ ++A +W FI+A+ S YF+ P+ +V L +F
Sbjct: 61 SRLRQVFKQPKQLLVLLITSLLIAGNWLIFIWAINNDHMLDASLGYFINPLFNVLLAMLF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ A L L ++I + G IPL+SL +A ++ Y RK + V + G
Sbjct: 121 LGERLRKLQWAAVALASLGVIIQLISFGSIPLVSLVLAASFGFYGLLRKKVNVDAKTGLL 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +LA AL Y++ S + L L+ G++ + F+ R S
Sbjct: 181 VETAILAPVALGYLLLTLDSSSASMLTNDWTLNLTLVAAGVVTTVPLLCFAGAAVRIPFS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+G +Y P +M + ++ + +P D + I FG + +A+++++ ++ +NK K+
Sbjct: 241 ILGFFQYIGPSIMFILAIKLFNEPFDIEKAITFGFIWVALMIFVSDLLLQRRRNKKAKN 299
>gi|312879356|ref|ZP_07739156.1| RarD protein, DMT superfamily transporter [Aminomonas paucivorans
DSM 12260]
gi|310782647|gb|EFQ23045.1| RarD protein, DMT superfamily transporter [Aminomonas paucivorans
DSM 12260]
Length = 301
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 2/302 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E A G L F AY+LWGI P+Y + L V E++ HR+LWS+ + +
Sbjct: 1 MEGAGKEGRRGLLAAFGAYVLWGILPVYWRALHGVGAPEILCHRILWSVVVLAGVLGATR 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G +++ + P+ +LV S + +W FI+A+ + + +S Y++ P+++V G
Sbjct: 61 RG-GEVREIFRRPRVAALLVCSGVTIGANWLLFIWAVNSGRILESSLGYYINPLVNVVFG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL+ERL LQ +A L + + G P ++L +A T+ Y RK PV ++
Sbjct: 120 VLFLRERLRPLQALAVGCAFLGVALEVGRYGSLPWVALGLASTFGLYGLLRKLAPVEAAP 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E LA +L Y+V+ G +GG+ F + +L L G GL+ S +F +G +R
Sbjct: 180 GLFVETLYLAPLSLGYLVFLGLTGGQAFGPADPGRSLLLAGAGLVTSVPLLLFGFGARRI 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
L T+G+ +Y +P L V+ + R V+ A+V+Y + +G+ +
Sbjct: 240 SLCTLGLAQYVSPTLTFALGVWAYGETFSPGRGQTLAFVLGALVLYTADALRQAGRERAL 299
Query: 315 KS 316
+S
Sbjct: 300 QS 301
>gi|271962170|ref|YP_003336366.1| RarD protein, DMT superfamily transporter [Streptosporangium roseum
DSM 43021]
gi|270505345|gb|ACZ83623.1| RarD protein, DMT superfamily transporter [Streptosporangium roseum
DSM 43021]
Length = 302
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 155/293 (52%), Gaps = 2/293 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L+ AY +WG+ PLY L+ +E+++HRV WSL V + S
Sbjct: 3 ESRRGVLYGIAAYTMWGLFPLYWPLLKPSGAVEILAHRVAWSLVAVVAIL-AVRRHWSWF 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ ++ PK VG+L A I+ V+WG +IYA+ T ++ YF+ P++SV G LKE
Sbjct: 62 RELMRTPKKVGLLALGAAIITVNWGVYIYAVNTGHVVESALGYFINPLVSVLFGVFLLKE 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL Q A L L+++++TL G P ++L +AV++ Y +K V ++E IE
Sbjct: 122 RLRPWQWGAVGLGTLAVVVLTLDYGRLPWIALVLAVSFGTYGLVKKIAQVNAAESLTIET 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
VL +PAL Y+V+ GG F L L G G++ + F+ R L+T+G
Sbjct: 182 LVLLLPALGYMVYLEGQGGATFGSLGAGHALLLAGGGVITAVPLLFFTSAAIRVPLTTLG 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+++Y AP+L + VF++ + + R F IV +A+ V+ ++ + + +
Sbjct: 242 LLQYIAPVLQFLVGVFVVHEVMPPSRWAGFAIVWLALSVFTWDSLRAAREARR 294
>gi|85711576|ref|ZP_01042634.1| Conserved membrane protein RarD [Idiomarina baltica OS145]
gi|85694728|gb|EAQ32668.1| Conserved membrane protein RarD [Idiomarina baltica OS145]
Length = 309
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 82/295 (27%), Positives = 152/295 (51%), Gaps = 2/295 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G F AY WG P+Y + ++QV E+++HR++W+ VF IV L+ L
Sbjct: 7 RARQGVFFALAAYSFWGFAPIYFKSVQQVPAFEILAHRIIWAFILVFILIVGLKR-LNRL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K +++PK + L + +L +W FI+A+ S Y++ P+++V +G F +E
Sbjct: 66 KPIIRSPKMMFRLTVATCLLGGNWFLFIWAVNANHMLDASLGYYINPLLNVAIGMAFFQE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++ LQ+ A L I+ + I + G +P ++LA+A +++ Y RK +PV S G ++E
Sbjct: 126 KMRRLQLFAIGLAIVGVGIQVVTFGSVPWVALALASSFAIYGAIRKRLPVDSISGLWLET 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L L Y+++ S + + L+ GL+ + F+ +R + +T+G
Sbjct: 186 TLLVPVMLGYLLFFADSPSADMTANSWQLNVLLMAAGLVTTIPLLCFTAAAQRIRYATLG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y AP LM + +V + +P+ + I F I+ A+ +Y +VI +N+ K
Sbjct: 246 FFQYIAPSLMFILAVNLYDEPLAESKLITFVIIWSALALYTFDSVIQRQRNRRLK 300
>gi|50123095|ref|YP_052262.1| hypothetical protein ECA4175 [Pectobacterium atrosepticum SCRI1043]
gi|49613621|emb|CAG77072.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 309
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P+Y + LE V E+++HR++WS + ++
Sbjct: 3 AQQTREGIFFALAAYFIWGIAPVYFKLLEHVPPNEILTHRIIWSFFFM-LILLTVGRKWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +N K + +L +A ++ +W +I+A+ S YF+ P+++V LG +FL
Sbjct: 62 QVSLACRNIKHLFLLALTAVLIGGNWLLYIWAVNNHHMLEASLGYFINPLVNVMLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A LL + +L+ G P+++L +A +++ Y RK I + G I
Sbjct: 122 GERFRRLQWLAVLLAVTGVLVQLWTFGSLPVVALGLAFSFALYGLLRKKIGIDGQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A+ Y+ + + H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAVIYLFFIADTPSSHLTANPWSLNLLLLSAGIVTTVPLLFFTSAAMRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P +M + +V + + + + F + A+ +++L + K +
Sbjct: 242 LGFFQYLGPTIMFMLAVVFYGETFSSDKLVAFAFIWGALGLFILDALYTQRKLRR 296
>gi|22124309|ref|NP_667732.1| hypothetical protein y0394 [Yersinia pestis KIM 10]
gi|45442964|ref|NP_994503.1| hypothetical protein YP_3212 [Yersinia pestis biovar Microtus str.
91001]
gi|21957082|gb|AAM83983.1|AE013640_2 hypothetical protein y0394 [Yersinia pestis KIM 10]
gi|45437831|gb|AAS63380.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
Length = 319
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WG+ P Y + ++QV E+++HRV+WS + ++ S
Sbjct: 26 KQQTRQGIFFALAAYFIWGLAPAYFKLIQQVPADEILTHRVIWSFFFM-LILLTVSRHWP 84
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++D KN K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 85 QVRDACKNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 144
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A+T++ Y RK + V + G I
Sbjct: 145 GERFRRMQWVAVALAFAGVLIQLWQFGSLPVIGLGLAITFALYGLLRKKLGVDAQTGMLI 204
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H L L G++ + F+ R +LST
Sbjct: 205 ETMWLLPVAAVYLFFIADSPTSHLSANAWSLNLLLAAAGVITTIPLLFFTAAATRLRLST 264
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 265 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFIFIWAALLLFTLDALYTQRKLRR 319
>gi|319645400|ref|ZP_07999632.1| YojE protein [Bacillus sp. BT1B_CT2]
gi|317392286|gb|EFV73081.1| YojE protein [Bacillus sp. BT1B_CT2]
Length = 326
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 157/317 (49%), Gaps = 5/317 (1%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV 60
M K A E + + N S T G ++ +Y+LWG+ PLY + L+Q + L++++HR+
Sbjct: 1 MQKSAESDEEERKETDMNHSSQT-KGIIYTALSYLLWGLLPLYWKVLDQTAALDILAHRI 59
Query: 61 LWSLPGVFFAIVYFSGGL---SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
+WS + ++ + N K L+ S+ +++++W +I+A+
Sbjct: 60 IWSFVFMCGVLLVLRQWKNGVKAFRSLSGNRKEFVPLILSSVLISINWYVYIWAVSNGYI 119
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAV 176
S Y++ P++S+ LG VFLKE+L +Q A LL L +LI G +P ++L +A
Sbjct: 120 LEASLGYYINPLVSIVLGIVFLKEKLTRMQGAAVLLAALGVLISAFQYGSVPYIALMLAF 179
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
++ Y A+K + S+ G +E ++A A Y+++ G+I + L
Sbjct: 180 SFGLYGLAKKRTSLSSAIGLTLETMMIAPVAAIYLLFFSHPEKAQAASGSIGMMVLLFLA 239
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
G+L + +F+ G K+ L VGI++Y AP + + VF+ +P ++ + F + A
Sbjct: 240 GVLTAIPLLLFAEGAKKLPLYQVGILQYIAPTITLCLGVFVYHEPFNSSKVFTFSCIWAA 299
Query: 297 MVVYLLPTVINSGKNKT 313
++++ L K
Sbjct: 300 LILFTLSQFQWKRPEKV 316
>gi|209693835|ref|YP_002261763.1| chloramphenicol-sensitive protein RarD [Aliivibrio salmonicida
LFI1238]
gi|208007786|emb|CAQ77908.1| chloramphenicol-sensitive protein RarD [Aliivibrio salmonicida
LFI1238]
Length = 305
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 151/300 (50%), Gaps = 2/300 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ E T G L AY +WGI P+Y + + VS LE++SHR +WS + ++
Sbjct: 3 TTELEQQRTRQGILLAIAAYTMWGIAPIYFKTINSVSPLEILSHRAIWSFFFL-AGLLCV 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
S G + +TLK+ + + LV + ++ +W FI+A+ S Y++ P+++V L
Sbjct: 62 SKGWKTVLNTLKDKRKMTYLVTTGLLVGTNWLIFIWAVNNNHMLDASLGYYINPLLNVVL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G +FL ERL LQ +A + +++ + IP+++LA+A ++ Y RK + + +
Sbjct: 122 GMIFLGERLRKLQWVAVACAAIGVIVQLITFGSIPIVALALACSFGFYGLLRKKVAMDAQ 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G FIE V+ A Y+++ S F + L LI G++ + F+ R
Sbjct: 182 SGLFIETLVMLPMAAIYLLFIADSATSSFTNNAMSLNLLLIAAGIITTIPLLCFTGAATR 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
KLST+G +Y P LM + +V + + T + I F + A++++ ++ +N+
Sbjct: 242 LKLSTLGFFQYIGPSLMFLLAVGLYGEEFSTDKAITFAFIWSALILFTGDALLYKKRNQK 301
>gi|227325789|ref|ZP_03829813.1| hypothetical protein PcarcW_00090 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 309
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 75/295 (25%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P+Y + LE V E+++HR++WS + ++
Sbjct: 3 AQQTREGIFFALAAYFIWGIAPVYFKLLEHVPPNEILTHRIIWSFFFML-ILLTIGRKWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +N K + +L +A ++ +W +I+A+ S YF+ P+++V LG +FL
Sbjct: 62 QVSLACRNVKHLFLLALTAVLIGGNWLLYIWAVNNHHMLEASLGYFINPLVNVMLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A LL + +L+ G P+++L +A +++ Y RK I + G I
Sbjct: 122 GERFRRLQWLAVLLAVTGVLVQLWTFGSLPIIALGLAFSFALYGLLRKKIGIDGQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A+ Y+ + + H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAVIYLFFIADTPSSHLTANPWSLNLLLLSAGIVTTVPLLFFTSAAMRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P +M + +V + + + + FG + A+ +++L + K +
Sbjct: 242 LGFFQYLGPTIMFMLAVVFYGETFSSDKLVTFGFIWGALALFILDALYTQRKLRR 296
>gi|282600068|ref|ZP_05972878.2| protein RarD [Providencia rustigianii DSM 4541]
gi|282566930|gb|EFB72465.1| protein RarD [Providencia rustigianii DSM 4541]
Length = 325
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 78/298 (26%), Positives = 151/298 (50%), Gaps = 2/298 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T G L AY +WG+ P+Y + +++V E+++HR++WS + ++ S
Sbjct: 28 SQQNTTKGVLCALGAYFIWGVAPIYFKTIKEVPAEEILTHRIIWSFFFM-LILLTLSRHW 86
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + LK PK + +L +A +A +W +I+A+ S YF+ P+++V G +F
Sbjct: 87 SYFRQVLKQPKKILVLGVTAVTIASNWLIYIWAVNNGHMLQASLGYFINPLVNVLFGMLF 146
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER +Q +A L + +LI G IP++ L++AVT++ Y RK + V + G
Sbjct: 147 LHERFRRMQWVAVALALTGVLIQLWQFGSIPIIGLSLAVTFATYGLLRKKLGVDAQTGMT 206
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E L + ++++ S + + + L LI G++ + +F+ +LS
Sbjct: 207 FETLWLLPVGVIFLLFFADSPTSNMTMNSWTLNLLLIAAGIITTVPLLLFTEAANHLRLS 266
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
T+G +Y P +M + +VF+ + + I FG + +A++++ L + K + K+
Sbjct: 267 TLGFFQYLGPSIMFLLAVFMYGEVMTQELLITFGFIWVALILFTLDALYTQQKLRRKQ 324
Score = 38.0 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 15/152 (9%), Positives = 47/152 (30%)
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L + G+ A + A + + V + E + L
Sbjct: 20 ISISELFMSQQNTTKGVLCALGAYFIWGVAPIYFKTIKEVPAEEILTHRIIWSFFFMLIL 79
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ + L L L + + + I+ + + + + + PL+
Sbjct: 80 LTLSRHWSYFRQVLKQPKKILVLGVTAVTIASNWLIYIWAVNNGHMLQASLGYFINPLVN 139
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ + L + ++ + + + +++ L
Sbjct: 140 VLFGMLFLHERFRRMQWVAVALALTGVLIQLW 171
>gi|311741757|ref|ZP_07715568.1| DMT superfamily drug/metabolite transporter RarD [Aeromicrobium
marinum DSM 15272]
gi|311314763|gb|EFQ84669.1| DMT superfamily drug/metabolite transporter RarD [Aeromicrobium
marinum DSM 15272]
Length = 307
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/286 (30%), Positives = 153/286 (53%), Gaps = 2/286 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G F AY+ WG PLY L+ + LE ++HRV+WSL V + L+
Sbjct: 12 GVAFGTGAYLCWGFFPLYWPLLDPATPLEALAHRVVWSLVFVAGLLTLTHR-WGRLRQIA 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ +AV +L ++ ++AV+WG FIY + T + TS YF+ P+++V LG + L E L
Sbjct: 71 RDRRAVALLAVASVVIAVNWGAFIYGVTTDRVIETSLGYFINPLVTVLLGVLVLGENLRR 130
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q A L ++++++T+ G P+++L +A +++ Y F +K + +G+ EG +E +LA
Sbjct: 131 WQWTAVGLGTVAVVVLTVDYGHVPVIALTVAGSFAVYGFVKKKVALGTVEGLGLETMILA 190
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL Y+ W SGG F + L L G G++ + +F R LST+G+++Y
Sbjct: 191 PIALSYLAWLQVSGGLAFGHEGTGNALLLAGTGVITAIPLLLFGAAATRLSLSTIGLLQY 250
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P+L + + + + + R F +V +A+VV+ + N +
Sbjct: 251 LGPVLQFILGLVVFGEAMTPARWAGFVLVWLALVVFTTDALANRRR 296
>gi|251787841|ref|YP_003002562.1| RarD protein, DMT superfamily transporter [Dickeya zeae Ech1591]
gi|247536462|gb|ACT05083.1| RarD protein, DMT superfamily transporter [Dickeya zeae Ech1591]
Length = 306
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF AYILWGI P+Y + L QV E++SHR++WS + +
Sbjct: 2 SMPQHRQGFLFALGAYILWGIAPIYFKQLGQVPADEILSHRIIWSFLFMLLLLSLCRK-W 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++++ + P+ + +L +AT++A +W +I+A+ S YF+ P++SV LG +F
Sbjct: 61 GVVRNACRRPRQLLLLAITATLVACNWLVYIWAVNHNHMLEASLGYFINPLVSVLLGMIF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER Q +A LL + +L+ G P+++L +A ++ Y RK I + G
Sbjct: 121 LGERFRPTQWLAMLLAVCGVLVQLWTLGSLPVIALTLAFSFGIYGLLRKKIAIDGQTGML 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E L AL Y+ W S H + L LI G++ + +F+ R +LS
Sbjct: 181 FETLWLLPAALVYLEWLADSPTSHLSQNPLSLNLLLIAAGIVTTVPLLLFTAAAVRLRLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y AP L + +V + + I R + F + +A+ V+ L + + +
Sbjct: 241 TLGFFQYLAPTLTFLLAVLVYGETITPDRLVTFAFIWLALGVFTLDALYMQRRLRRA 297
>gi|256823727|ref|YP_003147690.1| RarD protein, DMT superfamily transporter [Kangiella koreensis DSM
16069]
gi|256797266|gb|ACV27922.1| RarD protein, DMT superfamily transporter [Kangiella koreensis DSM
16069]
Length = 310
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 76/298 (25%), Positives = 148/298 (49%), Gaps = 3/298 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A+++WG+ P+Y + LE VS LE+++HRV WS+P V +
Sbjct: 1 MQNINRAGYIYGILAFVIWGLAPIYFKALEGVSALEILAHRVAWSVPVVLLIMWAIKRPF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K ++ ++ ++ +++ +W F +A+ + TS YF+ P+ SV LG F
Sbjct: 61 PKNILQDKKTISILII--TSILISGNWLAFTWAVTNERVLETSLGYFINPLFSVALGIAF 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE+L IA +L L ++ + G P +SL +A ++ Y RK + +G +G
Sbjct: 119 LKEKLTTWSKIALILATLGVVYRIISLGSLPWVSLWLAFSFGLYGLLRKQVNIGPLQGLL 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E ++ Y+++ ++ F ++ L+ G++ + +FS G + L+
Sbjct: 179 VETLIVLPITAGYILYLWYTETGAFLHTSVSIDWLLLAGGIITTVPLALFSAGARLLPLN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
T+G M+Y AP L + +VF+ K+ +T I F ++ ++VY + V + + +
Sbjct: 239 TIGFMQYLAPSLTFLLAVFVFKEHFNTDLLITFALIWAGLIVYTIGVVRQQNRKRLDR 296
>gi|268592898|ref|ZP_06127119.1| protein RarD [Providencia rettgeri DSM 1131]
gi|291311689|gb|EFE52142.1| protein RarD [Providencia rettgeri DSM 1131]
Length = 297
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 151/297 (50%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T G L AY +WG+ P+Y + +++V E+++HR++WS + ++ S
Sbjct: 2 SQQNTTKGVLCALGAYFIWGVAPIYFKSIQEVPAEEILTHRIIWSFFFMIL-LLTVSRHW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S ++ LK PK + +L +AT +A +W +I+A+ S YF+ P+++V G +F
Sbjct: 61 SYVRQVLKQPKKILVLGVTATTIACNWLIYIWAVNNGYMLQASLGYFINPLVNVLFGMLF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ER +Q IA L + +LI G +P++ L++AVT++ Y RK + V + G
Sbjct: 121 LQERFRRMQWIAVGLALTGVLIQLWQFGSVPVIGLSLAVTFATYGLLRKKLGVDAQTGMT 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E L + ++++ S + + LI G++ + +F+ +LS
Sbjct: 181 FETLWLLPVGIIFLLFFADSPTSDMAMNDWHLNALLIAAGVITTVPLLLFTEAANHLRLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y P +M + +VF+ + + + FG + +A++++ L + K + K
Sbjct: 241 TLGFFQYMGPSIMFLLAVFVYGEVMTPELLVTFGFIWVALILFTLDALYTQQKLRKK 297
>gi|307328650|ref|ZP_07607823.1| RarD protein, DMT superfamily transporter [Streptomyces
violaceusniger Tu 4113]
gi|306885762|gb|EFN16775.1| RarD protein, DMT superfamily transporter [Streptomyces
violaceusniger Tu 4113]
Length = 378
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 142/292 (48%), Gaps = 3/292 (1%)
Query: 14 LSKENASLPT-MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
++ ++ G L+ F AY WG+ PL+ LE +E+++HR++WSL V ++
Sbjct: 1 MTPQDQQERADRAGLLYGFAAYAFWGLVPLFWPLLEPAGAVEILAHRMVWSLAAVGLVLL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S ++ L+ P+ + M+ +AT+++++WG +I+ + + + YF+ P++S+
Sbjct: 61 ALRR-WSWIRPLLREPRRLLMIALAATVISINWGLYIWGVNSGHLVEAALGYFINPLVSI 119
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVG 191
G + L+ERL Q A + +++ ++ + G P ++L +A +++ Y A+K + +
Sbjct: 120 AFGVLLLRERLRPAQWAAVGVGAVAVAVLAVGYGKLPWIALTLAFSFATYGLAKKRVGLD 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
E E V +PAL +++W G G F L G + + F
Sbjct: 180 GLESLAAETAVQFLPALGFLIWLGARGDSTFASEGAGHAALLASCGFVTALPLICFGASA 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
R LST+G+++Y AP + + + + R F +V +A+ +
Sbjct: 240 VRLPLSTIGMLQYVAPTFQFALGITVFHETMPPERWAGFSLVWLALALLTWD 291
>gi|238786201|ref|ZP_04630150.1| Uncharacterized transporter [Yersinia bercovieri ATCC 43970]
gi|238712891|gb|EEQ04954.1| Uncharacterized transporter [Yersinia bercovieri ATCC 43970]
Length = 300
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 2/297 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WGI P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRIIWSFFFM-LILLTVSRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +N K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSACRNGKRLLLLAVTAVLIASNWLIFIWAVNNNHMLEASLGYFINPLVNVLFGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L++A+T++ Y RK + V + G +
Sbjct: 122 GERFRRMQWVAVSLAFAGVLIQLWQFGSLPIIGLSLAITFALYGLIRKKLGVDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H L L G++ + F+ R KLST
Sbjct: 182 ETLWLLPIAAVYLFLIADSPTSHMSANAWSLNLLLAAAGVITTIPLLFFTAAASRLKLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+G +Y P LM + +V + I + + F + A++++ L + K + K
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGRDKMVTFIFIWAALLLFTLDALYTQHKRRNLK 298
>gi|51594554|ref|YP_068745.1| drug/metabolite tranporter (DMT) superfamily protein RarD [Yersinia
pseudotuberculosis IP 32953]
gi|108806184|ref|YP_650100.1| hypothetical protein YPA_0186 [Yersinia pestis Antiqua]
gi|108810294|ref|YP_646061.1| hypothetical protein YPN_0128 [Yersinia pestis Nepal516]
gi|145600703|ref|YP_001164779.1| hypothetical protein YPDSF_3453 [Yersinia pestis Pestoides F]
gi|153949630|ref|YP_001399212.1| RarD protein [Yersinia pseudotuberculosis IP 31758]
gi|153997108|ref|ZP_02022241.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162418853|ref|YP_001605145.1| hypothetical protein YpAngola_A0552 [Yersinia pestis Angola]
gi|165926286|ref|ZP_02222118.1| RarD protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165939188|ref|ZP_02227739.1| RarD protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166011671|ref|ZP_02232569.1| RarD protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213535|ref|ZP_02239570.1| RarD protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401868|ref|ZP_02307356.1| RarD protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421050|ref|ZP_02312803.1| RarD protein [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167426248|ref|ZP_02318001.1| RarD protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167468824|ref|ZP_02333528.1| hypothetical protein YpesF_13209 [Yersinia pestis FV-1]
gi|170026212|ref|YP_001722717.1| transporter DMT superfamily protein [Yersinia pseudotuberculosis
YPIII]
gi|186893556|ref|YP_001870668.1| transporter DMT superfamily protein [Yersinia pseudotuberculosis
PB1/+]
gi|218930839|ref|YP_002348714.1| hypothetical protein YPO3836 [Yersinia pestis CO92]
gi|229837165|ref|ZP_04457330.1| predicted chloramphenical resistance permease [Yersinia pestis
Pestoides A]
gi|229839525|ref|ZP_04459684.1| predicted chloramphenical resistance permease [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229900088|ref|ZP_04515225.1| predicted chloramphenical resistance permease [Yersinia pestis
biovar Orientalis str. India 195]
gi|229900466|ref|ZP_04515595.1| predicted chloramphenical resistance permease [Yersinia pestis
Nepal516]
gi|294505500|ref|YP_003569562.1| hypothetical protein YPZ3_3391 [Yersinia pestis Z176003]
gi|51587836|emb|CAH19439.1| Drug/metabolite tranporter (DMT) superfamily protein RarD [Yersinia
pseudotuberculosis IP 32953]
gi|108773942|gb|ABG16461.1| membrane protein [Yersinia pestis Nepal516]
gi|108778097|gb|ABG12155.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115349450|emb|CAL22423.1| putative membrane protein [Yersinia pestis CO92]
gi|145212399|gb|ABP41806.1| membrane protein [Yersinia pestis Pestoides F]
gi|149289414|gb|EDM39492.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|152961125|gb|ABS48586.1| RarD protein [Yersinia pseudotuberculosis IP 31758]
gi|162351668|gb|ABX85616.1| RarD protein [Yersinia pestis Angola]
gi|165912961|gb|EDR31587.1| RarD protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165921810|gb|EDR39007.1| RarD protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989440|gb|EDR41741.1| RarD protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205208|gb|EDR49688.1| RarD protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961179|gb|EDR57200.1| RarD protein [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167048761|gb|EDR60169.1| RarD protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054767|gb|EDR64571.1| RarD protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169752746|gb|ACA70264.1| RarD protein, DMT superfamily transporter [Yersinia
pseudotuberculosis YPIII]
gi|186696582|gb|ACC87211.1| RarD protein, DMT superfamily transporter [Yersinia
pseudotuberculosis PB1/+]
gi|229682485|gb|EEO78572.1| predicted chloramphenical resistance permease [Yersinia pestis
Nepal516]
gi|229686868|gb|EEO78947.1| predicted chloramphenical resistance permease [Yersinia pestis
biovar Orientalis str. India 195]
gi|229695891|gb|EEO85938.1| predicted chloramphenical resistance permease [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229706108|gb|EEO92117.1| predicted chloramphenical resistance permease [Yersinia pestis
Pestoides A]
gi|262367494|gb|ACY64051.1| hypothetical protein YPD8_3383 [Yersinia pestis D182038]
gi|294355959|gb|ADE66300.1| hypothetical protein YPZ3_3391 [Yersinia pestis Z176003]
gi|320013567|gb|ADV97138.1| putative chloramphenical resistance permease [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 296
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WG+ P Y + ++QV E+++HRV+WS + ++ S
Sbjct: 3 KQQTRQGIFFALAAYFIWGLAPAYFKLIQQVPADEILTHRVIWSFFFM-LILLTVSRHWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++D KN K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRDACKNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A+T++ Y RK + V + G I
Sbjct: 122 GERFRRMQWVAVALAFAGVLIQLWQFGSLPVIGLGLAITFALYGLLRKKLGVDAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H L L G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAVYLFFIADSPTSHLSANAWSLNLLLAAAGVITTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFIFIWAALLLFTLDALYTQRKLRR 296
>gi|159036133|ref|YP_001535386.1| transporter DMT superfamily protein [Salinispora arenicola CNS-205]
gi|157914968|gb|ABV96395.1| RarD protein, DMT superfamily transporter [Salinispora arenicola
CNS-205]
Length = 316
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 80/282 (28%), Positives = 154/282 (54%), Gaps = 2/282 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+P +G L+ AY++WG PLY + L+ S LE+++HR++WS+ V + S
Sbjct: 1 MPHKLGYLYGIGAYLIWGFFPLYMKLLQPASPLEILAHRIVWSVVFVALVLAAMR-NRSF 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ L+ P+A+ + +A ++A++WG +IY + + + TS YF+ P++ V LG L+
Sbjct: 60 LRALLRRPRALAAVGIAAALIALNWGTYIYGVNSERVVETSLGYFINPLVVVLLGVFVLR 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q A + +++++T+ G P ++ +++ Y +K + + +++G F+E
Sbjct: 120 ERLRPAQWAAMGVGGTAVVVLTVDYGRPPYLALVLSFSFAGYGLVKKRLGLPAAQGLFVE 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VLA+PAL Y+ W G +G F + T L+ G + +F+ R +++
Sbjct: 180 SAVLALPALAYLAWLGGTGQAAFGAVSAGHTALLVSAGAATAIPLLMFAGAANRLPFTSL 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G+++Y AP+L + V I +P+ R F +V +A+ ++
Sbjct: 240 GMLQYLAPILQLGCGVIIFHEPMPPARLAGFTLVWLALAIFT 281
>gi|260770706|ref|ZP_05879636.1| RarD protein [Vibrio furnissii CIP 102972]
gi|260614287|gb|EEX39476.1| RarD protein [Vibrio furnissii CIP 102972]
Length = 305
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 80/297 (26%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G + AY +WGI P+Y + + VS LE++SHRV+WS + A+++F
Sbjct: 2 TSEEQQNAKKGVILAISAYTMWGIAPIYFKAISSVSALEILSHRVIWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ K + L+ +A ++ +W FI+A+ S Y++ P+++V LG
Sbjct: 61 RHWRGMVNVFRDKKKMMYLLATALLVGGNWLIFIWAINANHMLDASLGYYINPLLNVVLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ A L + + I + + +P+++ ++A+T+ Y RK + V +
Sbjct: 121 MLFLGERLRKLQWFAVALAAIGVAIQLVVFGSVPIVAFSLAITFGLYGLLRKKVGVNAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE VL A Y++W S + L LI G++ + F+ +
Sbjct: 181 GLFIETLVLVPAAAIYLLWIADSATSSMLANDWHLNLLLISAGIVTTLPLLCFTGAATKL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
KLST+G +Y P LM + +V + + + I F + A+V++ + + K
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLVYGENFSADKAITFAFIWSALVIFSVDGLTQGRKR 297
>gi|258620545|ref|ZP_05715582.1| rarD protein [Vibrio mimicus VM573]
gi|258625867|ref|ZP_05720742.1| rarD protein [Vibrio mimicus VM603]
gi|262163728|ref|ZP_06031468.1| RarD protein [Vibrio mimicus VM223]
gi|258581831|gb|EEW06705.1| rarD protein [Vibrio mimicus VM603]
gi|258587060|gb|EEW11772.1| rarD protein [Vibrio mimicus VM573]
gi|262027708|gb|EEY46373.1| RarD protein [Vibrio mimicus VM223]
Length = 302
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L AY +WG+ P+Y + L +S E++SHRVLWS + +++F
Sbjct: 5 QHNARKGILLAISAYTMWGVAPIYFKALGAISAPEILSHRVLWSFV-LLAVLIHFGRRWR 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ + +L+ +A ++ +W FI+++ S Y++ P+++V LG +FL
Sbjct: 64 NVVNVVQARRKFWLLLLTALLVGGNWLLFIWSINANHMLDASLGYYINPLLNVLLGMLFL 123
Query: 140 KERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ A L + + + + + +P++++A+A T+ Y RK I V + G F+
Sbjct: 124 GERLRKLQWFAVALAAIGVGVQLVVFGSVPIVAIALATTFGFYGLLRKKIQVDAQTGLFL 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + A Y+ W S + L + L L+ G++ + F+ KLST
Sbjct: 184 ETLFMLPAAAIYLFWFADSATSNMMLNDWQLNLLLVSAGVVTTLPLLCFTGAAAHLKLST 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+G +Y P LM + +V + + + + I F + A+ V+ + + +
Sbjct: 244 LGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALAVFSFDGLKAGRAARRAQ 300
>gi|300721458|ref|YP_003710733.1| chloramphenicol resistance [Xenorhabdus nematophila ATCC 19061]
gi|297627950|emb|CBJ88496.1| chloramphenicol resistance [Xenorhabdus nematophila ATCC 19061]
Length = 296
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L+ AY++WG+ P+Y + ++ V E++SHRV+WS+ + +
Sbjct: 3 NQQTAKGILYALGAYLIWGLAPIYFKSIQYVPPDEIVSHRVIWSVFFMVLMLTVTR-HWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + PK + +L F+A + +W +I+A+ S YF+ P++SV G +FL
Sbjct: 62 QVWAIVHRPKTLLLLGFTAFTITSNWLTYIWAINNNHLLEASLGYFINPLVSVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +LI + G +P+++L +A T++ Y RK + V + G I
Sbjct: 122 GERFRRMQWVAVVLACIGVLIQVVQFGSVPVIALYLATTFAVYGLIRKKLGVDAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + AL Y+++ S + L LI G++ + F+ +LST
Sbjct: 182 ETVWVFPVALSYLLFFTNSPTSNMLENTYSLNLMLIAAGIITTVPLLFFTAAAAHLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + + + + I R I FG + A++++ L + + +
Sbjct: 242 LGFFQYLGPTLMFLLATLVYGEEIGPDRLITFGFIWAALILFTLDALYTQRRLRK 296
>gi|307634744|gb|ADI83611.2| RarD protein, DMT superfamily transporter [Geobacter sulfurreducens
KN400]
Length = 303
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 2/288 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +F AY+LWG P+Y + L V+ LEV+SHR+ WS+ + +
Sbjct: 9 AREARTGVIFGLAAYLLWGFFPIYFKALAGVTPLEVLSHRIAWSVATLAVMLTVARR-WD 67
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ P+ + L + ++AV+W FIYA+ + +S YF+ P++S FLG VFL
Sbjct: 68 GVRAAFSQPRTLMTLCATTLLIAVNWLVFIYAVGAGKVLQSSLGYFINPLVSAFLGVVFL 127
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL+ Q + +L + I+TL G P ++L++ +++ Y RK PV S G +
Sbjct: 128 HERLSPKQKASFILAAAGVAILTLRHGEFPWIALSLGLSFGLYGLLRKKAPVDSLAGLTV 187
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E +L AL Y+ W + G F G T+ L G+L S F+ KR +L+T
Sbjct: 188 ETLLLFPLALCYLGWLAYQGKSAFVSGPTHITVLLACAGVLTSTPLIWFAAATKRLRLAT 247
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
VG+M+Y P L V +VF + F ++ +V+Y
Sbjct: 248 VGLMQYVVPTLHFVLAVFAFGETFTPTHLASFALIWTGLVLYTYDAAK 295
>gi|315178537|gb|ADT85451.1| RarD protein [Vibrio furnissii NCTC 11218]
Length = 305
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 80/297 (26%), Positives = 145/297 (48%), Gaps = 2/297 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G + AY +WGI P+Y + + VS LE++SHRV+WS + A+++F
Sbjct: 2 TSEEQQNAKKGVILAISAYTMWGIAPIYFKAISSVSALEILSHRVIWSF-FLLAALLHFG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ K + L+ +A ++ +W FI+A+ S Y++ P+++V LG
Sbjct: 61 RHWRGMVNVFRDKKKMMYLLATALLVGGNWLIFIWAINANHMLDASLGYYINPLLNVVLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ A L + + I + + +P+++ ++A+T+ Y RK + V +
Sbjct: 121 MLFLGERLRKLQWFAVALAAIGVAIQLVVFGSVPIVAFSLAITFGLYGLLRKKVGVNAQT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE VL A Y++W S + L LI G++ + F+ +
Sbjct: 181 GLFIETLVLVPAAAIYLLWIADSATSSMLANDWHLNLLLISAGIVTTLPLLCFTGAATKL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
KLST+G +Y P LM + +V + + + I F + A+V++ + + K
Sbjct: 241 KLSTLGFFQYIGPSLMFLLAVLVYGEAFSADKAITFAFIWSALVIFSIDGLTQGRKR 297
>gi|307132963|ref|YP_003884979.1| putative chloramphenical resistance permease [Dickeya dadantii
3937]
gi|306530492|gb|ADN00423.1| predicted chloramphenical resistance permease [Dickeya dadantii
3937]
Length = 306
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 81/297 (27%), Positives = 144/297 (48%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF AYI+WGI P+Y + L QV E++SHR++WS + +
Sbjct: 2 SMPQHRQGMLFALGAYIIWGIAPVYFKQLTQVPADEILSHRIIWSFFFMLLLLSLSRK-W 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++++ + P+ + +L +A ++A +W +I+A+ S YF+ P++SV LG +F
Sbjct: 61 GVVRNACRRPRQLLLLAITAMLVACNWLIYIWAVNHNHMLEASLGYFINPLVSVLLGMLF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER Q +A +L + +L+ G P+++LA+A ++ Y RK I + G
Sbjct: 121 LGERFRPTQWLAMMLAVCGVLVQLWTLGSLPVIALALAFSFGIYGLLRKKIAIDGQTGML 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E L AL Y+ W S H L L+ G++ + +F+ R +LS
Sbjct: 181 FETLWLLPAALVYLEWLADSPTSHLSQNPTSLNLLLMAAGIVTTVPLLLFTSAAMRLRLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y AP L + +V + + I R + F + +A+ V+ L + + +
Sbjct: 241 TLGFFQYLAPTLTFLLAVLVYGETITPDRLVTFAFIWLALAVFTLDALYTQRRLRRA 297
>gi|90414259|ref|ZP_01222239.1| putative RarD [Photobacterium profundum 3TCK]
gi|90324706|gb|EAS41247.1| putative RarD [Photobacterium profundum 3TCK]
Length = 303
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 82/299 (27%), Positives = 138/299 (46%), Gaps = 2/299 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E + T G + AY +WGI P+Y + L+ VS LE++SHRV+WS + I
Sbjct: 1 MEEQAQKTQRGVILALAAYTMWGIAPIYFKALQNVSPLEILSHRVIWSFFFLAALIFVSK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + K + + V + + +W FI+A+ S YF+ P+ +V LG
Sbjct: 61 GWSKIRAVIAKPKMLLMLTVTALL-VGTNWMIFIWAVNNNYMLDASLGYFINPLFNVILG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ +A L + + G P ++LA+A ++ Y RK I + +
Sbjct: 120 MVFLGERLRALQWVAVALAACGVAAQLIQFGSLPWIALALAGSFGCYGLLRKKINLDAQT 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E CVL A Y+ + S + + L L+ G++ + F+ +
Sbjct: 180 GLFLETCVLLPLATIYIFFITDSPTANLADNPLQLNLLLVAAGVVTTLPLLCFTGAATKL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
KLST+G +Y P LM + +V + +P + F + A++++ + +K
Sbjct: 240 KLSTLGFFQYIGPSLMFLLAVLVYGEPFTVDNGMTFIFIWAALILFSFDGIKRHRDSKK 298
>gi|290477106|ref|YP_003470019.1| chloramphenicol resistance [Xenorhabdus bovienii SS-2004]
gi|289176452|emb|CBJ83261.1| chloramphenicol resistance [Xenorhabdus bovienii SS-2004]
Length = 296
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 75/296 (25%), Positives = 142/296 (47%), Gaps = 2/296 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L+ AY++WG+ P+Y + ++QV E++SHRV+WS+ + +
Sbjct: 2 TDQQTAKGVLYALGAYLIWGLAPIYFKTIQQVPPDEIVSHRVIWSVFFMVLLLTLTR-HW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + PK + +L +A +A +W +I+A+ S YF+ P+++V G +F
Sbjct: 61 RKVWVVARQPKKLLLLGITAFTIASNWLVYIWAVNNGHLLEASLGYFINPLVNVLFGMIF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER +Q +A L +LI G +P++ L +A+T++ Y RK + V + G
Sbjct: 121 LGERFRRMQWVAVGLAFTGVLIQLWQFGSVPVVGLYLAMTFAVYGLIRKKLGVDAQTGMM 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE + A+ Y++ S + + + LI G++ + F+ +LS
Sbjct: 181 IETVWVFPVAMVYLLCFTSSPTSNMLDNTLSLNMLLIAAGIITTVPLLFFTAAAAHLRLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
T+G +Y P LM + + + + I R I FG + A++++ L + + +
Sbjct: 241 TLGFFQYLGPTLMFLLATLVYGEQIGPERLITFGFIWAALILFTLDALYTQHRLRK 296
>gi|297201666|ref|ZP_06919063.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|197710961|gb|EDY54995.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length = 355
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 149/303 (49%), Gaps = 2/303 (0%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI 71
+G + +G L F AY +WG+ PL+ L+ E+++HR++WSL V A+
Sbjct: 17 RGGESVKSRGERHIGLLNGFAAYGMWGLVPLFWPLLKPAGAAEILAHRMVWSLVFVAVAL 76
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
V+ + + L+ P+ + ++ +A ++ V+WG +I+A+ + S YF+ P+++
Sbjct: 77 VFVRR-WAWAGELLRQPRRLALITVAAAVITVNWGVYIWAVNSGHVVEASLGYFINPLVT 135
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPV 190
+ +G + LKERL +Q A + ++L++T+ G P +SL +A +++ Y +K + +
Sbjct: 136 IAMGVLLLKERLRPVQWAAVGIGAAAVLVLTVGYGRPPWISLTLAFSFATYGLVKKKVNL 195
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
E E + +PAL Y++W G G F L G++ + F
Sbjct: 196 SGVESLAAETAIQFLPALGYLLWLGHQGNLSFATEGPGHAALLASTGIVTALPLVCFGAA 255
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
R LST+G+++Y AP+ + +F + + R F +V +A+ + + +
Sbjct: 256 AIRVPLSTLGLLQYLAPVFQFLLGIFYFGEAMPPERWAGFALVWLALTLLTWDALRTART 315
Query: 311 NKT 313
+
Sbjct: 316 LRR 318
>gi|254391167|ref|ZP_05006374.1| protein rarD [Streptomyces clavuligerus ATCC 27064]
gi|326442812|ref|ZP_08217546.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|197704861|gb|EDY50673.1| protein rarD [Streptomyces clavuligerus ATCC 27064]
Length = 349
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 150/292 (51%), Gaps = 2/292 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L+ AY +WG+ PL+ LE +E+++ R++WSL V A++ +++
Sbjct: 8 RAGLLYGIGAYGMWGLVPLFWPLLEPAGAMEILAQRMVWSLVLVVVALLALRR-WQWVRE 66
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L NP+ +G++ +A +++V+WG +I+A+ + S YF+ P++++ +G + L ERL
Sbjct: 67 LLSNPRRLGLITAAAAVISVNWGLYIWAVNNERVIEASLGYFINPLVTIAMGVLLLNERL 126
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+Q A L++L++ + G P +SL +A +++ Y +K + +G E E V
Sbjct: 127 RPVQWAAVATAALAVLVLAVGYGRPPWISLVLAFSFATYGLVKKKVNLGGLESLAAETAV 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L +PAL +++W G G F + L G++ + F R LST+G++
Sbjct: 187 LFLPALGFLLWLGSQGEATFATEGVGHATLLALTGVVTAVPLICFGAAAIRVPLSTLGLL 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+Y AP+ + V K+ + R F +V +A+ + + + +NK
Sbjct: 247 QYLAPVFQFLLGVLYFKEAMPPERWAGFTLVWLALAMLTWDALRTARRNKAA 298
>gi|238789389|ref|ZP_04633175.1| Uncharacterized transporter [Yersinia frederiksenii ATCC 33641]
gi|238722532|gb|EEQ14186.1| Uncharacterized transporter [Yersinia frederiksenii ATCC 33641]
Length = 296
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WGI P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRIIWSFFFM-LILLTVSRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +N K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSACRNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A+T++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVALAFGGVLIQLWQFGSLPVIGLGLAITFALYGLIRKKLGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H + L G++ + F+ R +LST
Sbjct: 182 ETMWLLPIAAVYLFFIADSPTSHLSANTWSLNVLLAAAGVITTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFAFIWAALLLFTLDALYTQRKLRA 296
>gi|39995875|ref|NP_951826.1| rarD protein [Geobacter sulfurreducens PCA]
gi|39982639|gb|AAR34099.1| rarD protein [Geobacter sulfurreducens PCA]
Length = 303
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 2/288 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +F AY+LWG P+Y + L V+ LEV+SHR+ WS+ + +
Sbjct: 9 AREARTGVIFGLAAYLLWGFFPIYFKALAGVTPLEVLSHRIAWSVATLAVMLTVARR-WD 67
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ P+ + L + ++AV+W FIYA+ + +S YF+ P++S FLG VFL
Sbjct: 68 GVRAAFSQPRTLMTLCATTLLIAVNWLVFIYAVGAGKVLQSSLGYFINPLVSAFLGVVFL 127
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL+ Q + +L + I+TL G P ++L++ +++ Y RK PV S G +
Sbjct: 128 HERLSPKQKASFILAAAGVAILTLRHGEFPWIALSLGLSFGLYGLLRKKAPVDSLAGLTV 187
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E +L AL Y+ W + G F G T+ L G+L S F+ KR +L+T
Sbjct: 188 ETLLLFPLALGYLGWLAYQGKSAFVSGPTHITVLLACAGVLTSTPLIWFAAATKRLRLAT 247
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
VG+M+Y P L V +VF + F ++ +V+Y
Sbjct: 248 VGLMQYVVPTLHFVLAVFAFGETFTPTHLASFALIWTGLVLYTYDAAK 295
>gi|162450607|ref|YP_001612974.1| RarD protein [Sorangium cellulosum 'So ce 56']
gi|161161189|emb|CAN92494.1| RarD protein [Sorangium cellulosum 'So ce 56']
Length = 308
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 2/302 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ G + AY WG+ P++ + L V +E+++HR +WSL +
Sbjct: 7 ARDSRKEAAWGVAYGIAAYSSWGVVPVFWKQLRHVGAVELLAHRTVWSLLSFVALTLAAG 66
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L L++ + V + + +++ +W FIYA+ + S YF+ P++SV LG
Sbjct: 67 Q-RRALGAALRDRRVVAAMAATGALVSANWVLFIYAVAVGRVLDASLGYFINPLLSVLLG 125
Query: 136 SVFLKERLNHLQIIAALLIILSLLIM-TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL+ERL Q +A L ++ + IP ++L +A T+ Y RK VGS
Sbjct: 126 MLFLRERLRPAQWLALGLAASGVVYLAVRAGSIPWIALGLASTFGVYGLLRKVAAVGSLP 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G +E +A Y+ G ++ L L G++ + F+ +R
Sbjct: 186 GSTLETSFIAPLGAAYLAALHAEGTGAAGRADLRTHLLLAATGIVTALPLVWFTNAARRL 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
L+TVG ++Y AP + +V + +P T + + F + + V+ V+ + ++
Sbjct: 246 SLTTVGFLQYLAPSGQFLLAVLVYDEPFTTAQAVSFAFIWTGLAVFSADAVLRARRSGRT 305
Query: 315 KS 316
+
Sbjct: 306 SA 307
>gi|183600293|ref|ZP_02961786.1| hypothetical protein PROSTU_03852 [Providencia stuartii ATCC 25827]
gi|188020083|gb|EDU58123.1| hypothetical protein PROSTU_03852 [Providencia stuartii ATCC 25827]
Length = 296
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 73/296 (24%), Positives = 153/296 (51%), Gaps = 2/296 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T+ G L AY++WG+ P+Y + +++V E+++HR++WS + +
Sbjct: 2 SQQNTIKGVLCALGAYLIWGVAPIYFKTIQEVPAEEILTHRIIWSFFFMLVLLTATK-HW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S ++ LK PK + +L +A +A +W +I+A+ S YF+ P+++V G +F
Sbjct: 61 SYMRQVLKQPKKILILGVTAVTIASNWLIYIWAVNHGYMLQASLGYFINPLVNVLFGMLF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ER +Q +A +L + +LI G +P++ L++AVT++ Y RK + V + G
Sbjct: 121 LQERFRRMQWVAVILALTGVLIQLWQFGSVPVIGLSLAVTFATYGLLRKKLGVDAQTGMT 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E L + ++++ S + + + + LI G++ + +F+ +LS
Sbjct: 181 FETLWLLPVGVIFLLFFADSPTSNMAMNDWHLNVLLILAGVITTVPLLLFTEAANHLRLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
T+G +Y P +M + +VFI + + + + FG + +A++++ L + + +
Sbjct: 241 TLGFFQYLGPTIMFLLAVFIYGEKMTSELLVTFGFIWVALILFTLDALYTQQRLRK 296
>gi|238798598|ref|ZP_04642074.1| Uncharacterized transporter [Yersinia mollaretii ATCC 43969]
gi|238717554|gb|EEQ09394.1| Uncharacterized transporter [Yersinia mollaretii ATCC 43969]
Length = 296
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WGI P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRIIWSFFFM-LILLTVSRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +N K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSACRNGKRLLLLAVTAVLIASNWLIFIWAVNHNHMLEASLGYFINPLVNVLFGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L++A+T++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVSLAFAGVLIQLWQFGSLPVIGLSLAITFALYGLIRKKLGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H + L G++ + F+ R KLST
Sbjct: 182 ETMWLLPIAAIYLFFIADSPTSHMSANAWSLNVLLAAAGVITTIPLLFFTAAASRLKLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + R + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGSDRIVTFVFIWAALLLFTLDALYTQRKRRA 296
>gi|294637964|ref|ZP_06716231.1| protein RarD [Edwardsiella tarda ATCC 23685]
gi|291088896|gb|EFE21457.1| protein RarD [Edwardsiella tarda ATCC 23685]
Length = 296
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY++WGI P+Y + ++QV E+++HR++WS + ++
Sbjct: 3 TQHTRQGILLALTAYLIWGIAPIYFKLIQQVPATEILTHRIIWSFFFML-ILLAIGRNWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +P + +L SA ++ +W +I+A+ S YF+ P+++V LG +FL
Sbjct: 62 QLYALRHSPYKIALLALSACLIGGNWLLYIWAVNHNHMLEASLGYFINPLVNVLLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A L I+ +++ G IP+++L +A +++ Y RK I + + G +
Sbjct: 122 GERFRRLQWLAVGLAIIGVMVQLWQFGSIPMIALGLAFSFAFYGLLRKKIAIDAQSGMLM 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L AL+Y+ S H L LI G++ + F+ R +LST
Sbjct: 182 ETLWLLPLALYYLFGVADSPTSHLTANPTSLNLLLIAAGVITTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + + + + + + I FG + A+++++L + + +
Sbjct: 242 LGFFQYLGPTLMFLLATLYYGEQMTSDKLIAFGFIWSALLLFILDALYTQRRLRR 296
>gi|212710161|ref|ZP_03318289.1| hypothetical protein PROVALCAL_01215 [Providencia alcalifaciens DSM
30120]
gi|212687160|gb|EEB46688.1| hypothetical protein PROVALCAL_01215 [Providencia alcalifaciens DSM
30120]
Length = 323
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 76/297 (25%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T G L AY +WG+ P+Y + +++V E+++HR++WS + ++ S
Sbjct: 28 SQQNTTKGVLCALGAYFIWGVAPIYFKSIKEVPAEEILTHRIIWSFFFMLL-LLTISRHW 86
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + LK PK + +L +A +A +W +I+A+ S YF+ P+++V G +F
Sbjct: 87 SYFRQVLKQPKKILVLGVTAVTIASNWLIYIWAVNNGHMLQASLGYFINPLVNVLFGMLF 146
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER +Q +A L + +LI G +P++ L++AVT++ Y RK + V + G
Sbjct: 147 LHERFRRMQWVAVGLALTGVLIQLWQFGSVPIIGLSLAVTFATYGLLRKKLGVDAQTGIT 206
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E L + ++++ S + + + LI G++ + +F+ +LS
Sbjct: 207 FETLWLLPVGIIFLLFFADSPTSDMTMNSWHLNILLIAAGIITTVPLLLFTEAANHLRLS 266
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y P +M + +VF+ + + I FG + +A++++ L + K + K
Sbjct: 267 TLGFFQYLGPSIMFLLAVFMYGEVMTQELLITFGFIWVALILFTLDALYTQQKLRRK 323
Score = 36.8 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 48/152 (31%)
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L + G+ A + A + + V + E + L
Sbjct: 20 ISISELFMSQQNTTKGVLCALGAYFIWGVAPIYFKSIKEVPAEEILTHRIIWSFFFMLLL 79
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ + L L L + + + I+ + + + + + PL+
Sbjct: 80 LTISRHWSYFRQVLKQPKKILVLGVTAVTIASNWLIYIWAVNNGHMLQASLGYFINPLVN 139
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ + L + ++ + G+ + +++ L
Sbjct: 140 VLFGMLFLHERFRRMQWVAVGLALTGVLIQLW 171
>gi|320162510|ref|YP_004175735.1| hypothetical protein ANT_31090 [Anaerolinea thermophila UNI-1]
gi|319996364|dbj|BAJ65135.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1]
Length = 297
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 84/288 (29%), Positives = 151/288 (52%), Gaps = 3/288 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G ++ F AY +WG+ PLY + L+ V +++++HRV+WSL + I +L
Sbjct: 2 KKGYVYAFLAYGMWGVFPLYWKALQNVPSVQILAHRVVWSLVFLVLLITLRREWEALRAR 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+P+ +G+ S ++ ++WG +I+ + TS YF+ P+++V LG VFL+ERL
Sbjct: 62 --LSPRVLGVYALSGALVTLNWGMYIWGVNANHVVETSLGYFINPLVNVLLGVVFLRERL 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q +A L + +L MT G P L+LA+A T+ Y + +KT P+ S G +E
Sbjct: 120 RPGQWLAIGLALAGVLYMTFAYGRLPWLALALAFTFGIYGYLKKTFPLNSLHGLTLETGA 179
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L Y+++ G F + ++L L G++ + F G + LST+G++
Sbjct: 180 VTPLMLGYLIFLETRGQGAFLHVSALESLLLALAGVVTATPLLFFGMGARLIPLSTMGLI 239
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+Y +P + + VF+ +P D R + F +V +A+ +YL + +
Sbjct: 240 QYLSPTMQFLLGVFLYHEPFDQARLVGFSVVWLALALYLAEGYWHQRR 287
>gi|229031214|ref|ZP_04187222.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH1271]
gi|228730110|gb|EEL81082.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH1271]
Length = 324
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 79/312 (25%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPG 66
K E + + S G ++ AY +WGI P+Y +++E+V E+++HR++W+
Sbjct: 3 KNEKRRKGKMGSQSAQQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVF 62
Query: 67 VFFAI---VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ + F + + K PK + L ++ +++ +W +I+A+ S
Sbjct: 63 MLLVLGVTKRFRQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLG 122
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYC 182
Y++ P+IS+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y
Sbjct: 123 YYINPLISILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGSIPWVSLSLAFSFGLYG 182
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+K + ++ G +E ++ A+ Y+V G G F ++ TL LIG G++ +
Sbjct: 183 LTKKLLNYDATIGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTAL 242
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F+ G + L VG ++Y AP + ++ VF+ + + + F + +A+ V+ +
Sbjct: 243 PLFYFAKGAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMMAFFCIWVALFVFSI 302
Query: 303 PTVINSGKNKTK 314
+ + K
Sbjct: 303 AKTKFLVQKQPK 314
>gi|229174219|ref|ZP_04301753.1| chloramphenicol-sensitive RarD protein [Bacillus cereus MM3]
gi|228609237|gb|EEK66525.1| chloramphenicol-sensitive RarD protein [Bacillus cereus MM3]
Length = 324
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 78/312 (25%), Positives = 157/312 (50%), Gaps = 4/312 (1%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPG 66
K E + + S G ++ AY +WGI P+Y +++E+V E+++HR++W+
Sbjct: 3 KNEKRRKGKMGSQSAQQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVF 62
Query: 67 VFFAI---VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ + F + + K PK + L ++ +++ +W +I+A+ S
Sbjct: 63 MLLVLGVTKRFRQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLG 122
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYC 182
Y++ P+IS+ LG+ LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y
Sbjct: 123 YYINPLISILLGTAVLKEKLNFWQYVAVGLAGIGVIILTVRFGSIPWVSLSLAFSFGLYG 182
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+K + ++ G +E ++ A+ Y+V G G F ++ TL LIG G++ +
Sbjct: 183 LTKKLLNYDATIGLTMETMLVTPFAIIYLVMTGAHGFGSFGSISMSSTLLLIGAGIVTAL 242
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F+ G + L VG ++Y AP + ++ VF+ + + + F + +A+ V+ +
Sbjct: 243 PLFYFAKGAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMMAFFCIWVALFVFSI 302
Query: 303 PTVINSGKNKTK 314
+ + K
Sbjct: 303 AKTKFLVQKQPK 314
>gi|259417880|ref|ZP_05741799.1| RarD protein [Silicibacter sp. TrichCH4B]
gi|259346786|gb|EEW58600.1| RarD protein [Silicibacter sp. TrichCH4B]
Length = 311
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 76/300 (25%), Positives = 150/300 (50%), Gaps = 1/300 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S + ++ T G F AY++WG PLY + L + EV++HRV+WS+P ++
Sbjct: 1 MSTKPENVDTPQGLAFALTAYVMWGFLPLYMKMLAHIPPTEVVAHRVIWSVPIAGVLLLL 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
LK L++P+ + M +A ++V+WG +++++ + + Y++ P+ S+
Sbjct: 61 LGRM-GDLKAALRSPRVLLMGCVTAAFVSVNWGIYVWSVGSGYALEAALGYYINPLFSIA 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LG++ L ERL Q++A L L+++I+T+ +G L+ + K
Sbjct: 120 LGALLLGERLTRAQMVAVGLATLAVIILTVETGRLPLAALGLTVSWGFYAFFKKSLPIGP 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F+ ++ + + G+ F DTL L+G G++ + I++ G K
Sbjct: 180 NQGFLLEVLILTIPALGYIIYLTATGQSHFANVRFDTLLLLGCGVVTAVPLIIYANGAKL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
KLST+ I++Y AP ++ + +VF+ K+P R + F ++ A+V+Y + + +
Sbjct: 240 LKLSTIAILQYIAPTMIFLVAVFVFKEPFGGARMVAFPLIWAALVIYSVSLLREMRRKGR 299
>gi|197333890|ref|YP_002154838.1| RarD protein [Vibrio fischeri MJ11]
gi|197315380|gb|ACH64827.1| RarD protein [Vibrio fischeri MJ11]
Length = 301
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 89/298 (29%), Positives = 155/298 (52%), Gaps = 2/298 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ T G LF AY +WGI P+Y + + +VS LE++SHRV+WS + A++ F
Sbjct: 3 TTTLEQQRTRQGVLFALGAYTIWGIAPIYFKTISEVSPLEILSHRVIWSFFFL-AALLSF 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
S G + + +TLK+ K + L+ ++ ++ +W FI+A+ S Y++ P+++V L
Sbjct: 62 SKGWTTVINTLKDKKKMTYLITTSVLIGANWLIFIWAVNAGHMLDASLGYYINPLLNVVL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G +FL ERL LQ IA L +LI + IP++++A+A ++ Y RK + + +
Sbjct: 122 GMIFLGERLRRLQWIAVLFASAGVLIQLITFGSIPVVAIALACSFGFYGLLRKKVAMDAQ 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G FIE V+ L Y+++ S +F + L LI G++ + F+ R
Sbjct: 182 TGLFIETLVMLPLTLIYLLFIADSATSNFSENTLNLNLLLIAAGIITTVPLLCFTGAATR 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
KLST+G +Y P LM + +V + + + I FG + A++++ + K
Sbjct: 242 LKLSTLGFFQYIGPSLMFLLAVGLYGEEFSADKAITFGFIWAALLIFTTDAFMARNKK 299
>gi|238756283|ref|ZP_04617598.1| Uncharacterized transporter [Yersinia ruckeri ATCC 29473]
gi|238705489|gb|EEP97891.1| Uncharacterized transporter [Yersinia ruckeri ATCC 29473]
Length = 295
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 76/294 (25%), Positives = 143/294 (48%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G LF AY +WG+ P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQQTRQGILFALAAYFIWGLAPAYFKLIQQVPADEILTHRIIWSFFFML-ILLTLSQNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ KN K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRQACKNRKRLLLLAVTALLIASNWLLFIWAVNHHHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A++++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVALAFGGVLIQLWQFGSLPMIGLGLAISFALYGLLRKKMGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H + L L G++ + +F+ R +LST
Sbjct: 182 ETLWLLPVAAVYLFFIADSPTSHLSVNAWSLNLLLAAAGVITTIPLLLFTAAASRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G +Y P LM + +V + + + + + FG + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVSFYGETVSSDKMVTFGFIWAALLLFTLDALYTQRKLR 295
>gi|229512490|ref|ZP_04401962.1| RarD protein [Vibrio cholerae TMA 21]
gi|229350489|gb|EEO15437.1| RarD protein [Vibrio cholerae TMA 21]
Length = 302
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 1 MFMTPDQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + P+ +L+ +A ++ +W FI+++ S Y++ P+++V
Sbjct: 60 LGRRWRSVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL LQ A L + + I + + +P++++A+A ++ Y RK I V +
Sbjct: 120 LGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F+E + A Y++W + L L L+ G++ + F+
Sbjct: 180 QTGLFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTAAAA 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + + + + I F + A+V++ + + +
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAAR 299
Query: 313 TKK 315
+
Sbjct: 300 RAR 302
>gi|253991586|ref|YP_003042942.1| rard protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|211638464|emb|CAR67086.1| rard protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|253783036|emb|CAQ86201.1| rard protein [Photorhabdus asymbiotica]
Length = 296
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G L+ F A +WGI P+Y + ++QV E+++HRV+WS + I
Sbjct: 3 KPQTTKGVLYAFGACFIWGIAPVYFKHIQQVPADEILTHRVIWSFFFMLLLITLTR-HWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ PK V +L +AT++A +W +I+A+ S YF++P+++V G +FL
Sbjct: 62 QVVKVFHQPKKVLLLAVTATVVACNWLIYIWAVNHGHMLEASLGYFISPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q A L +LI G IP++ L++AVT++ Y RK + V + G I
Sbjct: 122 SERFRRMQWTAVALAFTGVLIQLWQFGSIPVIGLSLAVTFALYALLRKKMNVDAQTGMAI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + L LI G++ + +F+ +LST
Sbjct: 182 ETLWLLPVAATYLFGFADTPTSDLSSNPATLNLLLIAAGIITTVPLLLFTEAAAHLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + + + + I T R I FG + A+V++ L V K++
Sbjct: 242 LGFFQYVGPTLMFLLATLVYDEQIGTDRLITFGFIWAALVLFTLDAVYTQRKSQK 296
>gi|153825920|ref|ZP_01978587.1| rarD protein [Vibrio cholerae MZO-2]
gi|149740328|gb|EDM54464.1| rarD protein [Vibrio cholerae MZO-2]
Length = 302
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 1 MFMTPDQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + P+ +L+ +A ++ +W FI+++ S Y++ P+++V
Sbjct: 60 LGRRWRSVVGVIHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL LQ A L + + I + + +P++++A+A ++ Y RK I V +
Sbjct: 120 LGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F+E + A Y++W + L L L+ G++ + F+
Sbjct: 180 QTGLFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAA 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + + + + I F + A+V++ + + +
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKTGHAAR 299
Query: 313 TKK 315
+
Sbjct: 300 RAR 302
>gi|15640225|ref|NP_229852.1| rarD protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587572|ref|ZP_01677338.1| rarD protein [Vibrio cholerae 2740-80]
gi|153800837|ref|ZP_01955423.1| rarD protein [Vibrio cholerae MZO-3]
gi|153818570|ref|ZP_01971237.1| rarD protein [Vibrio cholerae NCTC 8457]
gi|153821592|ref|ZP_01974259.1| rarD protein [Vibrio cholerae B33]
gi|227080416|ref|YP_002808967.1| rarD protein [Vibrio cholerae M66-2]
gi|229507003|ref|ZP_04396511.1| RarD protein [Vibrio cholerae BX 330286]
gi|229509373|ref|ZP_04398856.1| RarD protein [Vibrio cholerae B33]
gi|229516320|ref|ZP_04405768.1| RarD protein [Vibrio cholerae RC9]
gi|229527302|ref|ZP_04416695.1| RarD protein [Vibrio cholerae 12129(1)]
gi|229606511|ref|YP_002877159.1| RarD protein [Vibrio cholerae MJ-1236]
gi|254851324|ref|ZP_05240674.1| rarD protein [Vibrio cholerae MO10]
gi|298500837|ref|ZP_07010639.1| RarD protein [Vibrio cholerae MAK 757]
gi|24212620|sp|Q9KVF1|Y195_VIBCH RecName: Full=Uncharacterized transporter VC_0195
gi|9654601|gb|AAF93371.1| rarD protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121548210|gb|EAX58280.1| rarD protein [Vibrio cholerae 2740-80]
gi|124123668|gb|EAY42411.1| rarD protein [Vibrio cholerae MZO-3]
gi|126510909|gb|EAZ73503.1| rarD protein [Vibrio cholerae NCTC 8457]
gi|126520879|gb|EAZ78102.1| rarD protein [Vibrio cholerae B33]
gi|227008304|gb|ACP04516.1| rarD protein [Vibrio cholerae M66-2]
gi|229335310|gb|EEO00794.1| RarD protein [Vibrio cholerae 12129(1)]
gi|229346746|gb|EEO11716.1| RarD protein [Vibrio cholerae RC9]
gi|229353688|gb|EEO18625.1| RarD protein [Vibrio cholerae B33]
gi|229356108|gb|EEO21027.1| RarD protein [Vibrio cholerae BX 330286]
gi|229369166|gb|ACQ59589.1| RarD protein [Vibrio cholerae MJ-1236]
gi|254847029|gb|EET25443.1| rarD protein [Vibrio cholerae MO10]
gi|297540341|gb|EFH76400.1| RarD protein [Vibrio cholerae MAK 757]
Length = 302
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 1 MFMTPDQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + P+ +L+ +A ++ +W FI+++ S Y++ P+++V
Sbjct: 60 LGRRWRSVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL LQ A L + + I + + +P++++A+A ++ Y RK I V +
Sbjct: 120 LGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F+E + A Y++W + L L L+ G++ + F+
Sbjct: 180 QTGLFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAA 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + + + + I F + A+V++ + + +
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAAR 299
Query: 313 TKK 315
+
Sbjct: 300 RAR 302
>gi|221134098|ref|ZP_03560403.1| Conserved membrane protein RarD [Glaciecola sp. HTCC2999]
Length = 310
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 155/313 (49%), Gaps = 9/313 (2%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV 60
M + +T + GL+ A G LF CAY +WGI P+Y + L V +E++ HR+
Sbjct: 1 MQESSTPPNSASGLTSTQA------GMLFAICAYTMWGIAPIYFKQLLHVDAVEILMHRI 54
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+WS + I+ ++ + L + K +G+LV + +L +W FI+++
Sbjct: 55 IWSALVLAGLILGL-NHINKVTTALADKKVMGLLVCAGILLGGNWWLFIWSVNNDHLLEA 113
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWS 179
S Y++ P+ +V G VFL ER LQ +A LL + + I+ + G P ++L++A+++S
Sbjct: 114 SLGYYINPLFNVLFGFVFLGERFRRLQKVAVLLAFIGVAILIVSFGDVPYIALSLALSFS 173
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
Y RK I V S G FIE ++ AL Y S +F + + I GL+
Sbjct: 174 LYGLVRKQINVDSIPGLFIETVLMLPLALGY-WLWTDSPTSNFANNSTTINVLFICAGLV 232
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ F+ +R ST+G +Y P LM V ++ + +P + R I FG V +A+ V
Sbjct: 233 TTAPLLCFTSAARRIMYSTLGFFQYIGPTLMFVIAIMVYNEPFNIERVITFGFVWLALAV 292
Query: 300 YLLPTVINSGKNK 312
+ V + K K
Sbjct: 293 FTYDGVRHYRKQK 305
>gi|149908515|ref|ZP_01897177.1| rarD protein [Moritella sp. PE36]
gi|149808349|gb|EDM68286.1| rarD protein [Moritella sp. PE36]
Length = 302
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 82/298 (27%), Positives = 147/298 (49%), Gaps = 2/298 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ T G +F AY++WG+ PLY + L QV E+++HR LWS + ++
Sbjct: 2 TTNNDTKQGVIFAILAYVMWGMAPLYFKQLHQVPAYEILAHRALWSCI-LIAVLLSLFRL 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++K L PK V +L+ ++ +++V+W +I+A+ S YF+ P+I+V LG V
Sbjct: 61 WPMVKSVLSVPKNVLLLICTSLLISVNWLTYIWAVNNDHLLDASLGYFINPIINVLLGMV 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL LQ A LL ++ +LI + G P ++L ++ T+ Y RK + + + G
Sbjct: 121 FLSERLRKLQWAAILLAVIGILIQVITLGYLPWVALVLSCTFGFYGLLRKKLHLNALVGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE ++ A Y+ S ++ L L+ + + F++ R L
Sbjct: 181 LIETIIMLPVAATYLFIFADSATSDLSANSMHLNLLLLSAAFVTTIPLLCFNHAAIRLPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
ST+G +Y P L+ + V + + ++T + FG + +VV+ + N+ + K
Sbjct: 241 STLGFFQYIGPTLIFILGVTLYDEVVNTETLLTFGFIWAGLVVFSIDGFKNNRHQRAK 298
>gi|262172710|ref|ZP_06040388.1| RarD protein [Vibrio mimicus MB-451]
gi|261893786|gb|EEY39772.1| RarD protein [Vibrio mimicus MB-451]
Length = 302
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/297 (24%), Positives = 141/297 (47%), Gaps = 2/297 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L AY +WG+ P+Y + L +S E++SHRVLWS + +++F
Sbjct: 5 QHNARKGILLAISAYTMWGVAPIYFKALGAISAPEILSHRVLWSFV-LLAVLIHFGRRWR 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ + +L+ +A ++ +W FI+++ S Y++ P+++V LG +FL
Sbjct: 64 NVVNVVQAQRKFWLLLLTALLVGGNWLLFIWSINANHMLDASLGYYINPLLNVLLGMLFL 123
Query: 140 KERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ A L + + + + + +P++++A+A T+ Y RK I V + G F+
Sbjct: 124 GERLRKLQWFAVALAAIGVGVQLVVFGSVPIVAIALATTFGFYGLLRKKIQVDAQTGLFL 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + A Y+ W S + L L L+ G++ + F+ KLST
Sbjct: 184 ETLFMLPAAAIYLFWFADSATSNMMLNYWQLNLLLVSAGVVTTLPLLCFTGAAAHLKLST 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+G +Y P LM + +V + + + + I F + A+ V+ + + +
Sbjct: 244 LGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALAVFSFDGLKAGRAARRAQ 300
>gi|238763621|ref|ZP_04624581.1| Uncharacterized transporter [Yersinia kristensenii ATCC 33638]
gi|238698099|gb|EEP90856.1| Uncharacterized transporter [Yersinia kristensenii ATCC 33638]
Length = 296
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WGI P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRIIWSFFFML-ILLTVSRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +KN K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSAIKNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A+T++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVALAFGGVLIQLWQFGSLPVIGLGLAITFALYGLIRKKLGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H + L G++ + F+ R +LST
Sbjct: 182 ETMWLLPIAAVYLFFIADSPTSHMGANTWSLNVLLAAAGVITTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFVFIWAALLLFTLDALYTQRKLRA 296
>gi|238793568|ref|ZP_04637192.1| Uncharacterized transporter [Yersinia intermedia ATCC 29909]
gi|238727158|gb|EEQ18688.1| Uncharacterized transporter [Yersinia intermedia ATCC 29909]
Length = 296
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G LF AY +WGI P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGILFALAAYFIWGIAPAYFKLIQQVPADEILTHRIIWSFFFM-LILLTVSRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +N K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSACRNGKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P+++L +A++++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVALAFGGVLIQLWQFGSLPIIALGLAISFALYGLIRKKLGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H L L G++ + F+ R KLST
Sbjct: 182 ETMWLLPIAAVYLFFIADSPTSHMSANAWSLNLLLAAAGVITTIPLLFFTAAATRLKLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFAFIWAALLLFTLDALYTQRKLRA 296
>gi|89893973|ref|YP_517460.1| hypothetical protein DSY1227 [Desulfitobacterium hafniense Y51]
gi|219668349|ref|YP_002458784.1| RarD protein, DMT superfamily transporter [Desulfitobacterium
hafniense DCB-2]
gi|89333421|dbj|BAE83016.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538609|gb|ACL20348.1| RarD protein, DMT superfamily transporter [Desulfitobacterium
hafniense DCB-2]
Length = 305
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 80/292 (27%), Positives = 149/292 (51%), Gaps = 2/292 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L AY WG+ P+Y + L+ V E+++HR+ WS V ++Y
Sbjct: 3 EKSSKTGVLSALAAYTAWGLLPIYWKTLQSVPAQEILAHRITWSFVFVALLVLY-KKQWG 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L++ V L+ SA ++ +W +I+A+ + + S Y+ P+I V +G + L
Sbjct: 62 KIRSVLRDRSKVLGLLLSALLVTSNWYIYIWAVNSNRVVEASLGYYFNPLIVVLMGIMVL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER++ QI + +L L +LI+ L G IP +SL +A T++ Y A++ + V S G +
Sbjct: 122 GERIDRWQIASIVLACLGVLILALEYGKIPWISLGLATTFALYGLAKRLVAVDSLLGLTL 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E V+ A+ Y+ G + G +P L L+G G++ + F++ K +T
Sbjct: 182 ETAVVTPIAIIYLWTAGANSGGTISHFGVPTLLLLMGAGIVTAIPLLWFAHAAKNVPFTT 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+G ++Y +P L +V VF+ + + + FG + +A+ VY + ++ K
Sbjct: 242 IGFIQYLSPTLSLVLGVFVYHEEFTSTHALSFGFIWLALAVYSVSRIVVFRK 293
>gi|229521105|ref|ZP_04410526.1| RarD protein [Vibrio cholerae TM 11079-80]
gi|229524850|ref|ZP_04414255.1| RarD protein [Vibrio cholerae bv. albensis VL426]
gi|229338431|gb|EEO03448.1| RarD protein [Vibrio cholerae bv. albensis VL426]
gi|229341990|gb|EEO06991.1| RarD protein [Vibrio cholerae TM 11079-80]
Length = 302
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 1 MFMTPDQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + P+ +L+ +A ++ +W FI+++ S Y++ P+++V
Sbjct: 60 LGRRWRSVVGVIHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL LQ A L + + I + + +P++++A+A ++ Y RK I V +
Sbjct: 120 LGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F+E + A Y++W + L L L+ G++ + F+
Sbjct: 180 QTGLFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAA 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + + + + I F + A+V++ + + +
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAAR 299
Query: 313 TKK 315
+
Sbjct: 300 RAR 302
>gi|238750690|ref|ZP_04612189.1| Uncharacterized transporter [Yersinia rohdei ATCC 43380]
gi|238711080|gb|EEQ03299.1| Uncharacterized transporter [Yersinia rohdei ATCC 43380]
Length = 296
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WG+ P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGIFFALAAYFIWGLAPAYFKLIQQVPADEILTHRIIWSFFFM-LILLTVSRHWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +N K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSACRNGKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P+++L +A++++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVSLAFAGVLIQLWQFGSLPIIALGLAISFALYGLIRKKLGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H L G++ + F+ R +LST
Sbjct: 182 ETMWLLPIAAVYLFFIADSPTSHLSANTGSLNALLAAAGVITTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFIFIWAALLLFTLDALYTQRKLRA 296
>gi|265997843|ref|ZP_06110400.1| transporter DMT superfamily protein [Brucella ceti M490/95/1]
gi|262552311|gb|EEZ08301.1| transporter DMT superfamily protein [Brucella ceti M490/95/1]
Length = 317
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 27 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 86
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 87 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 145
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 146 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 205
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + +++ G K + +T+G+M+
Sbjct: 206 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLLRYATLGLMQ 265
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 266 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHRRNRAQ 316
>gi|269137487|ref|YP_003294187.1| putative chloramphenical resistance permease [Edwardsiella tarda
EIB202]
gi|267983147|gb|ACY82976.1| putative chloramphenical resistance permease [Edwardsiella tarda
EIB202]
gi|304557560|gb|ADM40224.1| RarD [Edwardsiella tarda FL6-60]
Length = 296
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 75/295 (25%), Positives = 144/295 (48%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G + AY++WGI P+Y + L+QV E+++HRV+WS + ++
Sbjct: 3 TQHTRQGVILALTAYLIWGIAPIYFKLLQQVPATEILTHRVIWSFFFM-LILLAIGRSWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L P + +L SA ++ +W +I+A+ S YF+ P+++V LG +FL
Sbjct: 62 QLYALRHTPYKIALLALSACLIGGNWLLYIWAVNHNHMLEASLGYFINPLVNVLLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L I+ +++ G +P+++L +A +++ Y RK I + + G +
Sbjct: 122 GERFRRMQWLAVALAIVGVMVQLWQFGSVPVIALGLAFSFAFYGLLRKKIAIDAQSGMLM 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L AL+Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETLWLLPLALYYLFVAADSPTSHLSANPLSLNLLLIAAGVVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + + + + + I FG + A++++++ + + +
Sbjct: 242 LGFFQYLGPTLMFLLATLCYGEQMTRDKLIAFGFIWSALLLFIIDALYTQRRLRR 296
>gi|197287155|ref|YP_002153027.1| chloramphenicol-sensitive protein [Proteus mirabilis HI4320]
gi|194684642|emb|CAR46559.1| putative chloramphenicol-sensitive protein [Proteus mirabilis
HI4320]
Length = 297
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T+ G L AY++WGI P+Y + +++V E+++HR+LWS + +
Sbjct: 2 SQKNTLKGVLCALGAYLIWGIAPVYFKSIQEVPAEEILTHRILWSFFFMLLLMSITR-HW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ ++ PK V ML +A I+A +W +I+A+ S YF+ P+++V G +F
Sbjct: 61 PYLRQLVRQPKKVLMLALTAVIIASNWLIYIWAVNHGFMLEASLGYFINPLVNVLFGMIF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER +Q A L + I G +P++ L++AVT+ Y RK + V + G
Sbjct: 121 LGERFRRMQWFAVSLAFTGVFIQLWQFGSVPVIGLSLAVTFGLYGLLRKKLGVDAQTGMT 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE L AL Y+++ S + + LI G++ + +F+ + +LS
Sbjct: 181 IETLWLFPVALVYILFFTHSPTSNMLENSWSLNTLLIAAGVITTVPLLLFTEAAQHLRLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G +Y P LM + + + + ID R + FG + +A++++ L + + +
Sbjct: 241 TLGFFQYIGPTLMFILATMVYGEQIDAERLVTFGFIWVALILFTLDALYTQQRLRRS 297
>gi|123440595|ref|YP_001004589.1| hypothetical protein YE0201 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087556|emb|CAL10337.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 296
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WGI P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRIIWSFFFML-ILLTVSRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +KN K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSAIKNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A+T++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVALAFGGVLIQLWQFGSLPVIGLGLAITFALYGLIRKKLGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H + L G++ + F+ R +LST
Sbjct: 182 ETMWLLPIAAVYLFFIADSPTSHMGANAWSLNVLLAAAGVITTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFVFIWAALLLFTLDALYTQRKLR 295
>gi|254226333|ref|ZP_04919923.1| rarD protein [Vibrio cholerae V51]
gi|125621138|gb|EAZ49482.1| rarD protein [Vibrio cholerae V51]
Length = 302
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 145/303 (47%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 1 MFMTPDQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
S + + P+ +L+ +A ++ +W FI+++ S Y++ P+++V
Sbjct: 60 LSRRWRSVVGVIHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL LQ A L + + I + + +P++++A+A ++ Y RK I V +
Sbjct: 120 LGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F+E + A Y++W + L L L+ G++ + F+
Sbjct: 180 QTGLFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAA 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + + + + I F + A+V++ + + +
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAAR 299
Query: 313 TKK 315
+
Sbjct: 300 RAR 302
>gi|226940275|ref|YP_002795349.1| RarD [Laribacter hongkongensis HLHK9]
gi|226715202|gb|ACO74340.1| RarD [Laribacter hongkongensis HLHK9]
Length = 440
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 78/290 (26%), Positives = 147/290 (50%), Gaps = 2/290 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G F Y+ WG+ PLY L+QV ++++ HR++WS + I+ + L
Sbjct: 149 GIAAAFGCYLCWGLFPLYWIPLQQVPAMQILGHRMVWSAL-LIVGILVWRRHWQWLLPVW 207
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P+ +G+ SA++LA +W FI+A+ S YF+ P++++ LG + L ERLN
Sbjct: 208 RQPRQLGVFALSASLLACNWLTFIWAVNNGHVIEASLGYFINPLVNILLGRMVLGERLNR 267
Query: 146 LQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+Q+ A + + + +T +P ++L +A T+ Y RK P+ S EG +E +L
Sbjct: 268 IQLAAISVSVAGVAWLTWQVGSLPWIALVLAGTFGVYGLMRKMAPMASLEGLALETFLLF 327
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL ++W + G F + L+G G + + +F+ +R L+T+G +Y
Sbjct: 328 PVALGGLLWLEWQGQGVFGHAPLAIDWLLVGTGAVTTIPLLLFAAAARRLTLTTLGFFQY 387
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
AP + + + ++P D R + FG++ A+++Y +P + + +
Sbjct: 388 LAPSIQFFIGLTVFREPFDAQRLVGFGLIWCALLIYSMPALARLVRRPGR 437
Score = 43.7 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 15/165 (9%), Positives = 45/165 (27%)
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + +++ + + SGI + V + +
Sbjct: 121 PWRSVRIGRFVAGLPVVMATSDSSSSRSGIAAAFGCYLCWGLFPLYWIPLQQVPAMQILG 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M A+ + +VW L + + F + + +
Sbjct: 181 HRMVWSALLIVGILVWRRHWQWLLPVWRQPRQLGVFALSASLLACNWLTFIWAVNNGHVI 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + PL+ I+ +L + ++ ++ + V +
Sbjct: 241 EASLGYFINPLVNILLGRMVLGERLNRIQLAAISVSVAGVAWLTW 285
>gi|229544263|ref|ZP_04433322.1| RarD protein, DMT superfamily transporter [Bacillus coagulans 36D1]
gi|229325402|gb|EEN91078.1| RarD protein, DMT superfamily transporter [Bacillus coagulans 36D1]
Length = 317
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 155/302 (51%), Gaps = 4/302 (1%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
G +K+ G L+ F AY LWG+ P+Y + +EQV +E+++HR+ WS + +
Sbjct: 9 GPAKQQMGNNQKSGVLYTFFAYFLWGLFPIYWKMIEQVPAIEILAHRIFWSFIFMIILLA 68
Query: 73 YFSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ + +K+ +++P+ +L+ ++ +++ +W +I+A+ TS Y++ P+
Sbjct: 69 FLRKMGDLKTSIKEGVRHPRTPLLLLLASVLVSGNWFIYIWAVNNGHVIETSMGYYINPL 128
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTI 188
+S+ LG VFLKE+LN Q +A LL + I T G P +++ +A+T+ Y +K +
Sbjct: 129 VSILLGMVFLKEKLNRWQCLAFLLAACGVAIQTFSYGHIPWIAIGLALTFGFYGLVKKKV 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G E + AL Y++ G F + T+ LIG G++ + F+
Sbjct: 189 DIDAFIGLTFETFFVMPVALLYLLVIQVKGTASFATVSPGLTVLLIGTGVVTAIPLICFA 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G + L+ +G +Y P + ++ + K+P V+ + F + +A++V+ + +
Sbjct: 249 QGARSISLTMIGFFQYLTPTMTLIMGIAFFKEPFTHVQLLSFAFIWLALIVFSVSGFLPK 308
Query: 309 GK 310
K
Sbjct: 309 KK 310
>gi|299067866|emb|CBJ39077.1| putative permease, rarD-like [Ralstonia solanacearum CMR15]
Length = 298
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G +F F AY +WG+ PLY + L+ V+ LE++SHRV+WSL + +
Sbjct: 1 MSAHVRGGVIFAFLAYTMWGLFPLYFKLLKAVTPLEILSHRVIWSLAVMVAVL-AVKRHW 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L + P+ VG + +LA++W +I+A+ S YF+ P++ V L +
Sbjct: 60 AWLWALRRQPRVVGRHLACTGMLALNWCTYIWAVNHDHVLDASLGYFINPLVVVVLALLV 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL Q A + ++ +T +G P ++L +A T+ Y RKT P+G+ EG
Sbjct: 120 LGERLRPGQWFALAPAVAGVVWLTWQAGHLPWIALVLATTFGLYGLLRKTSPLGALEGLA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L L Y+ W F + L L+ G L + +F G +R LS
Sbjct: 180 LETLLLFPLTLAYLGWLAAQQQNAFLAASPGLRLLLVLAGPLTAVPLLLFGAGARRIPLS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G+++Y +P L ++ V++ +P + + + ++ +VVY + +
Sbjct: 240 LLGLLQYVSPTLQLLLGVWLYNEPFVGPKVLGYALIWCGLVVYSAEGWLRLRRR 293
>gi|221369350|ref|YP_002520446.1| RarD protein, DMT superfamily transporter [Rhodobacter sphaeroides
KD131]
gi|221162402|gb|ACM03373.1| RarD protein, DMT superfamily transporter [Rhodobacter sphaeroides
KD131]
Length = 336
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 176/289 (60%), Gaps = 2/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY++WG P+Y + L + EV++HRV+WS+P +V L+
Sbjct: 49 SPRGMAFALSAYLIWGFLPVYMKALSHIPAYEVVAHRVIWSVPVALAVLVALGRT-QDLR 107
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A +++V+WG +++A+ T+ Y++ P+ SVFLG+V L ER
Sbjct: 108 AALRSPRMLLMAAATAALISVNWGIYVWAIGAGHALDTALGYYINPLFSVFLGAVLLGER 167
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LN LQ+ A +L + +++++T+ +G P++++++ +TW Y + +K++P+G ++GF +E+
Sbjct: 168 LNRLQLAAIVLAVAAVIVLTVEAGRLPIVAISLMLTWGCYAYLKKSLPIGPNQGFLLEVL 227
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L PAL ++W SG HF G++ D L+G G++ + +++ G K KLST+G
Sbjct: 228 LLLPPALGVLIWVEGSGQGHFLHGSLADQALLLGTGVVTAVPLMLYANGAKLLKLSTIGF 287
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++Y AP L+ +++VF+ +P I F ++ +A+V++ + V + +
Sbjct: 288 LQYVAPTLIFLTAVFVFGEPFGRAEAIAFPMIWVALVIFTVALVRATRR 336
>gi|153216099|ref|ZP_01950273.1| rarD protein [Vibrio cholerae 1587]
gi|153831453|ref|ZP_01984120.1| rarD protein [Vibrio cholerae 623-39]
gi|124114475|gb|EAY33295.1| rarD protein [Vibrio cholerae 1587]
gi|148873065|gb|EDL71200.1| rarD protein [Vibrio cholerae 623-39]
Length = 302
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 1 MFMTHDQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + P+ +L+ +A ++ +W FI+++ S Y++ P+++V
Sbjct: 60 LGRRWRSVVGVIHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL LQ A L + + I + + +P++++A+A ++ Y RK I V +
Sbjct: 120 LGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F+E + A Y++W + L L L+ G++ + F+
Sbjct: 180 QTGLFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAA 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + + + + I F + A+V++ + + +
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAAR 299
Query: 313 TKK 315
+
Sbjct: 300 RAR 302
>gi|119470515|ref|ZP_01613218.1| hypothetical protein ATW7_11891 [Alteromonadales bacterium TW-7]
gi|119446216|gb|EAW27493.1| hypothetical protein ATW7_11891 [Alteromonadales bacterium TW-7]
Length = 306
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F A+++WG+ P+Y + ++ V+ E++ HRV+WS+ + +
Sbjct: 5 TEQRKGAIFACLAFVMWGLAPIYFKLIQHVTAFEILMHRVVWSVVFLILVVSVLK-CWRK 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+K + PK + MLV ++ +L +WG FI+A+ S Y++ P+++V LG +FL
Sbjct: 64 IKHIIIQPKLMLMLVITSGLLGFNWGLFIWAINNNHMLDASLGYYINPLLNVLLGMLFLG 123
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q +A L +++ + P+++ ++A++++ Y RK +PV + G +E
Sbjct: 124 ERLRKFQGVAVGLAFSGVILQLVSFGSFPVVAFSLAISFALYGLLRKKLPVEALPGILLE 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L AL Y S + L LI G++ + F+ KR + +T+
Sbjct: 184 ALILLPVALVYWWIMTPSDTSSLPNNDWLTNLLLISAGIVTTLPLLCFTGAAKRLQYTTL 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G +Y P LM + +V + DT R I F + A+ ++ + S K K
Sbjct: 244 GFFQYIGPSLMFILAVVFYDEVFDTERLITFACIWSALAIFSWDSYHQSRKRKKA 298
>gi|261324797|ref|ZP_05963994.1| transporter DMT superfamily protein [Brucella neotomae 5K33]
gi|261300777|gb|EEY04274.1| transporter DMT superfamily protein [Brucella neotomae 5K33]
Length = 317
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 27 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 86
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 87 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 145
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 146 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 205
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + +++ G K + +T+G+M+
Sbjct: 206 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLLRYATLGLMQ 265
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 266 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHRRNRAQ 316
>gi|293393901|ref|ZP_06638208.1| DMT superfamily drug/metabolite transporter RarD [Serratia
odorifera DSM 4582]
gi|291423728|gb|EFE96950.1| DMT superfamily drug/metabolite transporter RarD [Serratia
odorifera DSM 4582]
Length = 295
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P+Y + ++QV E+++HRV+WS + ++
Sbjct: 3 AQQTRQGIFFALAAYFIWGIAPVYFKLIQQVPADEILTHRVIWSFFFMLG-LISLGHNWK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +N K + +L +A ++ +W +I+A+ S YF+ P+++V LG +FL
Sbjct: 62 KVRAACQNRKRLLLLALTAVLIGGNWLLYIWAVNNHHMLEASLGYFINPLVNVLLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +L+ G P++ L +A +++ Y RK I + + G I
Sbjct: 122 GERFRRMQWVAVALAFTGVLVQLWQFGSLPIIGLGLAFSFAFYGLLRKKIAIDAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAVYLFVIADSATSHLTANPWSLNLLLVAAGIITTVPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G +Y P LM + +V + I + + FG + A+++++L + + +
Sbjct: 242 LGFFQYLGPTLMFLLAVTFYDETIGQDKLVTFGFIWAALLLFILDALYTQRRLR 295
>gi|297563984|ref|YP_003682957.1| RarD protein, DMT superfamily transporter [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296848433|gb|ADH70451.1| RarD protein, DMT superfamily transporter [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 351
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 80/286 (27%), Positives = 148/286 (51%), Gaps = 1/286 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G + A++LWG+ LY L E+++HR++W+L + I+ G S
Sbjct: 3 ESKRGVVLGATAFLLWGVAALYWPLLSSSEPSEILAHRMVWALLAMCVVILVTRRGWSWF 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L++P+ + + +A +++V+W FIYA+ Q S +YF+ P++SV LG + E
Sbjct: 63 PSVLRSPRRLLPVAAAAVLISVNWWGFIYAVSIEQTLQASLAYFINPLMSVCLGVLLFSE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL LQ A L +L++ +MT+ G P L+L +A T++AY +K + + +E
Sbjct: 123 RLRALQWAAVGLGVLAVAVMTVAYGVTPWLALLMAATFAAYGAVKKYVDLDGVRSLTVET 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ +PAL +VV +G F + T L+G G + + +F ++ LS +G
Sbjct: 183 MVMFLPALGFVVHLEATGAGTMFSVSPGHTALLVGSGFVTALPLLLFGVAARQVPLSVIG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I++Y AP++M + + + R + F +V +A+ +++ V
Sbjct: 243 ILQYIAPVIMFFVGWLVQGEEMPPARWLGFALVWLALCAFVVDQVR 288
>gi|238760170|ref|ZP_04621317.1| Uncharacterized transporter [Yersinia aldovae ATCC 35236]
gi|238701606|gb|EEP94176.1| Uncharacterized transporter [Yersinia aldovae ATCC 35236]
Length = 296
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WGI P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRIIWSFFFML-ILLTVSRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ ++N K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSAIQNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A+T++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVSLAFGGVLIQLWQFGSLPVIGLGLAITFALYGLIRKKLGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H + L G++ + F+ R KLST
Sbjct: 182 ETLWLLPIAAVYLFFIADSPTSHMSANAWSLNVLLAAAGVITTIPLLFFTAAATRLKLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFAFIWAALLLFTLDALYTQRKLRA 296
>gi|332159825|ref|YP_004296402.1| hypothetical protein YE105_C0201 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607632|emb|CBY29130.1| protein rarD [Yersinia enterocolitica subsp. palearctica Y11]
gi|325664055|gb|ADZ40699.1| hypothetical protein YE105_C0201 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 296
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WGI P Y + ++QV E+++HR++WS + ++ S
Sbjct: 3 KQRTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRIIWSFFFM-LILLTVSRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +KN K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRSAIKNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A+T++ Y RK + + + G +
Sbjct: 122 GERFRRMQWVAVALAFGGVLIQLWQFGSLPVIGLGLAITFALYGLIRKKLGIDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H + L G++ + F+ R +LST
Sbjct: 182 ETMWLLPIAAVYLFFIADSPTSHMGANAWSLNILLAAAGVITTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + I + + F + A++++ L + K +
Sbjct: 242 LGFFQYLGPTLMFILAVTFYGETIGNDKMVTFVFIWAALLLFTLDALYTQRKLRA 296
>gi|262273199|ref|ZP_06051015.1| protein rarD [Grimontia hollisae CIP 101886]
gi|262222777|gb|EEY74086.1| protein rarD [Grimontia hollisae CIP 101886]
Length = 299
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 2/298 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N + T G L AY +WG+ PLY + L V LEV+ HRVLWS + I G
Sbjct: 2 NDAQQTRRGVLLALGAYTMWGVAPLYFKALTNVPPLEVLMHRVLWSFFFLALIIHASGG- 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ +K LK+ K +G+L +A ++A +W FI+A+ + S Y++ P+I+V LG V
Sbjct: 61 LARVKLLLKDKKRLGLLTLTALVIATNWLIFIWAVNNDRMLDASLGYYINPLINVVLGMV 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ER LQ +A L + I + G P ++L +A ++ +Y RK I + ++ G
Sbjct: 121 FLGERFRKLQWVAVALAFSGVAIQVITFGSLPWVALVLACSFGSYGLLRKKINIDAATGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
FIE VL AL Y+++ S ++ L L+ G++ + F+ + +L
Sbjct: 181 FIETLVLLPVALVYLLFIANSATSDMMQNSLGLNLLLVAAGIVTTLPLLCFNGAATKLRL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
ST+G +Y P +M + +V + +P + F + +A+ ++ V K + +
Sbjct: 241 STLGFFQYIGPSIMFMLAVGLYSEPFTADKATTFAFIWMALAIFTFDAVRQRNKQRRQ 298
>gi|254291621|ref|ZP_04962410.1| rarD protein [Vibrio cholerae AM-19226]
gi|150422478|gb|EDN14436.1| rarD protein [Vibrio cholerae AM-19226]
Length = 302
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ G L AY +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 1 MFMTPDQQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSF-MLLAVLIH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + P+ +L+ +A ++ +W FI+++ S Y++ P+++V
Sbjct: 60 LGRRWRSVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL LQ A L + + I + + +P++++A+A ++ Y RK I V +
Sbjct: 120 LGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F+E + A Y++W + L L L+ G++ + F+
Sbjct: 180 QTGLFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAA 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + + + + I F + A+V++ + + +
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAAR 299
Query: 313 TKK 315
+
Sbjct: 300 RAR 302
>gi|170780966|ref|YP_001709298.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169155534|emb|CAQ00646.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 317
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 71/300 (23%), Positives = 125/300 (41%), Gaps = 4/300 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ T G + AY LWG+ P++ L E++ R+L+SL I
Sbjct: 1 MTRPTPESSTRTGLIAAVGAYGLWGVLPVFFLLLVPAGAFEIVGWRILFSLVVCAIVITA 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
S + ++ P+ L + ++ V+W ++Y L+ T+ YF+ P+++V
Sbjct: 61 ARR-WSRVVAIVRRPRIFLGLGLAGHLILVNWTVYVYGTLSGHVVETALGYFINPIVTVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP---V 190
LG + L+ERL LQ A L +++ ++ + G K
Sbjct: 120 LGVILLRERLRPLQWAAVCLSAVAVAVIAVGYGQLPWVSLALAGSFGLYGLVKKRVSGGA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ G +E L A +V G G + TL L+ G++ + F +
Sbjct: 180 DALSGLALETAWLVPAATAMLVITGAGAGLTIGTVSPGHTLLLVSTGVVTAGPLLPFGFA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
R LS +G+ +Y APLL VF+L + + R F IV A+V+ + V S +
Sbjct: 240 AGRLPLSVIGLTQYLAPLLQFAFGVFVLHEAMPPERWAGFAIVWAALVLLTIDMVRASRR 299
>gi|242237697|ref|YP_002985878.1| RarD protein, DMT superfamily transporter [Dickeya dadantii Ech703]
gi|242129754|gb|ACS84056.1| RarD protein, DMT superfamily transporter [Dickeya dadantii Ech703]
Length = 306
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 144/295 (48%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + AYI+WGI P+Y + L + E++SHR++WS + + +
Sbjct: 4 QQHRQGVGYALGAYIIWGIAPVYFKLLSAIPPNEILSHRIIWSFFFMLLLLSLSRK-WGV 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ L++P+ + +L +A ++A +W +I+A+ S YF+ P+I+V LG +FL
Sbjct: 63 VRQALRHPRQLLLLAVTALLVACNWLIYIWAVNNNHILEASLGYFINPLINVLLGMLFLG 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER +Q +A LL +L+ G P+++L++A ++ Y RK I + G +E
Sbjct: 123 ERFRPMQWLAMLLAAFGVLVQLWTFGSLPVIALSLAFSFGFYGLLRKKIGIDGQTGMLVE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L A+ Y++ S H TL L+ G++ + +F+ R +LST+
Sbjct: 183 TLWLLPAAMIYLLLFADSPTSHVMQNPPSLTLLLMMAGVVTTVPLLLFTAAAMRLRLSTL 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G +Y P L + +V + + I R I FG +A+++++ + + +
Sbjct: 243 GFFQYLGPTLTFLLAVVVYGETISVDRLITFGFTWLALIIFIADALYTQRRLRRA 297
>gi|117620446|ref|YP_854768.1| RarD protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117561853|gb|ABK38801.1| RarD protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 300
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 2/298 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ CAY LWG+ P+Y + + V E+++HR++WS + +
Sbjct: 2 QQHVQRQGVIYALCAYTLWGLAPIYFKTIAAVPAAEILTHRMIWSCA-LLMVLTLLGRQW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ L+ PK + L F++ + +W FI+A+ S Y++ P+ +V LG +F
Sbjct: 61 HKVQAVLRQPKVLLTLAFTSITVGGNWLLFIWAINNGHMLDASLGYYINPLFNVLLGMLF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E+L LQ A L + + I + G P ++L +A +++ Y RK + + + G
Sbjct: 121 LSEKLRRLQWWAVGLAAIGVAIQIIAFGSLPWIALVLASSFAIYGLIRKKLALDALTGLL 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE ++ PA Y+ S H + L LI G + + F+ R KLS
Sbjct: 181 IETLIMLPPAAIYLWGFADSPTSHLTQNDWHLNLLLIAAGAVTTAPLLCFTAAATRLKLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
T+G +Y P LM + +V + + + + I F + A+V++ L + + + + +
Sbjct: 241 TLGFFQYIGPSLMFILAVTLYGEALALDKMITFAFIWSALVLFSLDGLRSGKRRQAAE 298
>gi|330444886|ref|ZP_08308541.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489196|dbj|GAA03038.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 307
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 80/290 (27%), Positives = 143/290 (49%), Gaps = 2/290 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + AY +WGI P+Y + L QV+ LE++SHRV+WS + I+ +
Sbjct: 8 AKRGIILAIAAYTMWGIAPIYFKSLSQVTALEILSHRVIWSFFFLALIIII-GRQRHRVS 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
LK PK + +L+ SA ++ +W FI+A+ S Y++ P+++V LG + L ER
Sbjct: 67 AILKQPKTLFLLLISALLVGCNWLIFIWAVNNDYILDASLGYYINPLLNVLLGMLVLGER 126
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQ A L+ + ++ + G P ++ A+A+++ Y RK I + + G FIE C
Sbjct: 127 LRPLQWGAVLIAAIGVVAELIQFGSLPWIAFALAISFGFYGLLRKKINIDAQTGLFIETC 186
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL A Y+++ S + + L L G++ + F+ + K ST+G
Sbjct: 187 VLLPLAAIYLIFITDSPTANLSQNPLDLNLLLFAAGIVTTLPLLCFTGAATKLKFSTLGF 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+Y P LM + ++F+ ++ I FG + A++++ + +
Sbjct: 247 FQYIGPSLMFILAIFLYQEQFKLEHGITFGCIWFALLLFSVDGIRTHRLQ 296
>gi|99079912|ref|YP_612066.1| rarD protein [Ruegeria sp. TM1040]
gi|99036192|gb|ABF62804.1| rarD protein [Ruegeria sp. TM1040]
Length = 311
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 77/301 (25%), Positives = 150/301 (49%), Gaps = 1/301 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S + ++ T G F AYI+WG PLY + L + EV++HRV+WS+P ++
Sbjct: 1 MSTKPENVDTPQGLSFALTAYIMWGFLPLYMKMLAHIPPTEVVAHRVIWSVPIAGVLLLA 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
LK L++P+ +GM +A ++++WG +++++ + Y++ P+ S+
Sbjct: 61 LGRM-GDLKAALRSPRVLGMGCVTAAFVSINWGIYVWSVGAGYALEAALGYYINPLFSIA 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LG++ L ERL Q++A L L+++I+T+ +G L+ + K
Sbjct: 120 LGALLLGERLTRAQMVAVGLATLAVVILTVEAGRLPLAALGLTFSWGFYAFFKKSLPIGP 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F+ ++ + + G+ F DTL L+G G++ + I++ G K
Sbjct: 180 NQGFLLEVLILTIPAIGYIAYLTTTGQSHFASVRFDTLLLLGCGVVTAVPLIIYANGAKL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
KLST+ I++Y AP ++ + +VF+ K+P R + F ++ A+V+Y + +
Sbjct: 240 LKLSTIAILQYIAPTMIFLVAVFVFKEPFGGARMVAFPLIWAALVIYSTSLLREMRRKGR 299
Query: 314 K 314
+
Sbjct: 300 Q 300
>gi|261213177|ref|ZP_05927460.1| RarD protein [Vibrio sp. RC341]
gi|260837595|gb|EEX64289.1| RarD protein [Vibrio sp. RC341]
Length = 300
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 75/297 (25%), Positives = 140/297 (47%), Gaps = 2/297 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L AY +WG+ P+Y + L VS E++SHRVLWS + +++
Sbjct: 5 QHNAKKGILLAISAYTMWGVAPIYFKALGAVSAPEILSHRVLWSFV-LLAVLIHLGRRWR 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ P+ +L+ +A ++ +W FI+++ S Y++ P+++V LG +FL
Sbjct: 64 NVVGVVQTPRKFWLLLLTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFL 123
Query: 140 KERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ A L + + I + + +P++++A+A ++ Y RK I V + G F+
Sbjct: 124 GERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFL 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + A Y+ W S + L L LI G++ + F+ KLST
Sbjct: 184 ETLFMLPAAAIYLFWFADSTTSNLLLNGWQLNLLLISAGVVTTLPLLCFTGAAAHLKLST 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+G +Y P LM + +V + + + + I F + A+ ++ + + +
Sbjct: 244 LGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWGALFIFSFDGLKAGHAARRAR 300
>gi|119773473|ref|YP_926213.1| rarD protein [Shewanella amazonensis SB2B]
gi|119765973|gb|ABL98543.1| rarD protein [Shewanella amazonensis SB2B]
Length = 293
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 2/292 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N G L AY +WG PLY + LEQ+S +++ HRV+WS +V+ G
Sbjct: 2 NTDHEYRKGILLAIGAYTMWGFAPLYFKLLEQISATDILLHRVIWSFVFTALLMVFIGG- 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ LK PK + +L+ ++ ++A +W FI+A+ S Y++ P+++V LG V
Sbjct: 61 FGKLRQLLKAPKQLLVLLVTSVLIAGNWLLFIWAVNNDHMLDASLGYYINPLLNVLLGMV 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL LQ A L + + + + G IP++SLA+A ++ Y RK + V + G
Sbjct: 121 FLGERLRPLQWFAVFLATVGVTVQVISFGSIPVVSLALAGSFGIYGLLRKKVKVDAKTGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E +L AL Y+V S + L L+ G++ + F+ R L
Sbjct: 181 LVETAILMPVALGYLVLTLGSAEHSMLSNDWQLNLLLVAAGIVTTAPLLCFAGAAVRIPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S +G +Y P +M + +V + +P ++I FG + A+ V+ L +
Sbjct: 241 SMLGFFQYIGPSIMFILAVSLYGEPFGVEKSITFGFIWTALAVFTLDMLRRR 292
>gi|294630824|ref|ZP_06709384.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292834157|gb|EFF92506.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 345
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 75/285 (26%), Positives = 138/285 (48%), Gaps = 2/285 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L F AY +WG+ PL+ L+ E+++HR++WSL V A++ +
Sbjct: 8 EKRTGLLNGFAAYGMWGLVPLFWPLLKPAGAAEILAHRMVWSLAFVIVALLAVRR-WAWA 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L+ P+ + ++V +A ++ V+WG +I+A+ + S YF+ P++++ +G + LKE
Sbjct: 67 GELLRQPRKLALIVVAAAVITVNWGVYIWAVNSGHVVEASLGYFINPLVTIAMGVLILKE 126
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL +Q A S+L++ + G P +A +++ Y +K + +G E E
Sbjct: 127 RLRPVQWAAVATGAASVLVLAVGYGQPPWISLCLAFSFATYGLVKKKVDLGGVESLAAET 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V +PAL Y++W G G F L G++ + F R LST+G
Sbjct: 187 AVQFLPALGYLLWLGAHGEATFASEGAGHAALLASTGVVTALPLVCFGAAAIRVPLSTLG 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++Y AP+ V V + + R F +V +A+ + +
Sbjct: 247 LLQYLAPVFQFVLGVVYFHESMPPARWAGFALVWLALSMLTWDGL 291
>gi|270264263|ref|ZP_06192530.1| protein RarD [Serratia odorifera 4Rx13]
gi|270041912|gb|EFA15009.1| protein RarD [Serratia odorifera 4Rx13]
Length = 295
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 80/294 (27%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P Y + ++QV E+++HRV+WS + A++
Sbjct: 3 AKQTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRVIWSFFFML-ALITLGRNWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ T N K + +L +A ++ +W FI+A+ S YF+ P+++V LG +FL
Sbjct: 62 QVRATCSNRKRLLLLAVTAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNVLLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L +LI G P++ L +A +++ Y RK I + + G I
Sbjct: 122 GERFRRMQWLAVVLAFAGVLIQLWQFGSLPIIGLGLAFSFAFYGLLRKKIAIDAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAAYLFLFADSPTSHLSANPWSLNLLLVAAGVVTTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G +Y P LM + +V + I + + FG + A+++++L + K +
Sbjct: 242 LGFFQYLGPTLMFLLAVTFYGETIGQDKLVTFGFIWAALLLFILDALYTQRKLR 295
>gi|17545289|ref|NP_518691.1| hypothetical protein RSc0570 [Ralstonia solanacearum GMI1000]
gi|17427581|emb|CAD14100.1| putative predicted permeases transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 298
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 83/294 (28%), Positives = 145/294 (49%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G +F F AY +WG+ PLY + L+ V+ LE++SHRV+WSL ++
Sbjct: 1 MSAHVRGGVIFAFLAYTMWGLFPLYFKLLKAVTPLEILSHRVIWSLAV-MVVVLAVKRHW 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L + P+ VG + +LA++W +I+A+ S YF+ P++ V L +
Sbjct: 60 AWLWALRRQPRVVGRHLACTGMLALNWCTYIWAVNHDHVLDASLGYFINPLVVVLLALLV 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL Q A L + ++ +T +G P ++L +A T+ Y RKT P+G+ EG
Sbjct: 120 LGERLRPGQWFALALAVAGVVWLTWQAGHLPWIALVLATTFGLYGLLRKTSPLGALEGLA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL Y+ W F + L L+ G L + +F G +R LS
Sbjct: 180 LETLLLFPLALAYLGWLAAQQQNVFLVAPPGIQLLLVLAGPLTAVPLLLFGAGARRIPLS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G+++Y +P L ++ V++ +P + + + ++ +VVY + +
Sbjct: 240 LLGLLQYVSPTLQLLLGVWLYNEPFGGPKVLGYALIWCGLVVYSAEGWLRLRRR 293
>gi|297192760|ref|ZP_06910158.1| RarD protein [Streptomyces pristinaespiralis ATCC 25486]
gi|297151484|gb|EFH31190.1| RarD protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 332
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 71/295 (24%), Positives = 144/295 (48%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L+ AY +WG+ PL+ L+ +E+++HR++WSL V A++
Sbjct: 3 SDKEQRAGLLYGIGAYGMWGLVPLFWPLLKPSGAMEILAHRMIWSLVIVGIALLALRR-W 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+++ ++ P+ + ++ +A+++ V+WG +I+++ + S YF+ P++++ +G +
Sbjct: 62 GWIRELVRQPRKLALIAVAASVITVNWGLYIWSVNSGHVVEASLGYFINPLVTIAMGVLL 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL Q A + ++L++ + G P +A +++ Y +K + +G E
Sbjct: 122 LKERLRPAQWAAVGIGAAAVLVLAIGYGQPPWISLTLAFSFATYGLVKKKVNIGGLESLA 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E V +PA+ ++VW G G F L L GL+ + F R LS
Sbjct: 182 AETAVQFLPAMAFLVWLGADGSATFGLHGAGHAALLAATGLVTAVPLVCFGAAAIRVPLS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+G+++Y AP+ + + + + R F +V +A+ + + NK
Sbjct: 242 TLGLLQYLAPVFQFLLGILYFHEAMPAERWAGFALVWLALTCLTWDALRTARSNK 296
>gi|212635021|ref|YP_002311546.1| RarD protein [Shewanella piezotolerans WP3]
gi|212556505|gb|ACJ28959.1| RarD protein [Shewanella piezotolerans WP3]
Length = 295
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G F CAY LWG PLY + L VS E++ HRVLWS + + +F G
Sbjct: 4 TEHRKGIAFAICAYTLWGFAPLYFKLLTDVSAAEILLHRVLWSFLFMGLLMSFFGGFGRA 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K + + V ++ ++A +W FI+A+ S YF+ P+++VFL +FL
Sbjct: 64 RQLLKKPKQLAVLCV-TSCLIAANWLLFIWAVNNDHMLDASLGYFINPLVNVFLAMLFLG 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ A L + + I + G IPL+SL +A +++ Y RK + + + G +E
Sbjct: 123 ERLRKLQWAAVSLAAIGVSIQLISFGSIPLVSLGLAGSFACYGLLRKKVNIDAKTGLLVE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L ALFY++ N H +I L+ G++ + F+ R + +
Sbjct: 183 TAILMPVALFYLLSNMGDSLTHLMSNDIHLNGLLLAAGVITTVPLLCFAAAAVRIPFTML 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
G +Y P +M + ++ + +P D + I FG + A+ ++ + K
Sbjct: 243 GFFQYIGPSIMFILAISLFNEPFDMEKGITFGFIWAALALFTADMFYKRKQKK 295
>gi|317154353|ref|YP_004122401.1| RarD protein, DMT superfamily transporter [Desulfovibrio
aespoeensis Aspo-2]
gi|316944604|gb|ADU63655.1| RarD protein, DMT superfamily transporter [Desulfovibrio
aespoeensis Aspo-2]
Length = 305
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 87/281 (30%), Positives = 147/281 (52%), Gaps = 2/281 (0%)
Query: 37 WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
WG+ P+Y + L V+ LE++ HR+LWSL I+ F + L++P+ + +L
Sbjct: 23 WGLLPIYWKGLMGVAPLEILCHRILWSLVF-IAIILTFKHRWAETFAPLRSPRNLVILTL 81
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
S+ +A +W +I+A+ T TS Y++ P+++V G VF +ERLN LQ A L L
Sbjct: 82 SSLTIASNWLLYIWAVNTGNVLATSLGYYINPLVNVLFGVVFFRERLNPLQTAAIGLAAL 141
Query: 157 SLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
+ + G P +SL +AVT++ Y RK V S G F+E VL AL YV+
Sbjct: 142 GVANSVVSYGDFPWISLTLAVTFACYGLLRKIAAVESLPGLFLETMVLGPAALIYVLHLL 201
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
SG F G+ L L+G G + + F++G +R +L+T+G+++Y AP + V
Sbjct: 202 TSGTSGFLAGDTRIDLLLVGAGAVTALPLIGFAFGARRLRLTTIGLLQYIAPSIAFALGV 261
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
F+ +P + F + + +Y + +V +++ K+
Sbjct: 262 FVYHEPFGPSHLLTFACIWSGLALYTIDSVRAIRRHRRTKA 302
>gi|54310562|ref|YP_131582.1| putative RarD [Photobacterium profundum SS9]
gi|46915005|emb|CAG21780.1| putative RarD [Photobacterium profundum SS9]
Length = 303
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 2/299 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E + T G + AY +WGI P+Y + L+ VS LE++SHRV+WS + I +
Sbjct: 1 MEEQTKKTQRGVILALAAYTMWGIAPIYFKALQNVSPLEILSHRVIWSFFFLAALIFFSK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + + K + + V + + +W FI+A+ S YF+ P+ +V LG
Sbjct: 61 GWVKIRAVIAKPKMLLMLTVTALL-VGTNWMIFIWAVNNNYMLDASLGYFINPLFNVILG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL ERL LQ +A +L + + G P ++LA+A ++ Y RK I + +
Sbjct: 120 MVFLGERLRALQWVAVVLATCGVAAQLIQFGSLPWIALALAGSFGCYGLLRKKINLDAQT 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E CVL A Y+++ S + + L L+ G++ + F+ +
Sbjct: 180 GLFLETCVLLPLATIYILFITDSPTANLADNPLQLNLLLVAAGIVTTLPLLCFTGAATKL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
KLST+G +Y P LM + +V + +P + F + A++++ + +K
Sbjct: 240 KLSTLGFFQYIGPSLMFLLAVLVYDEPFSVDNGMTFIFIWSALILFSFDGIKRHRDSKK 298
>gi|147673550|ref|YP_001218454.1| rarD protein [Vibrio cholerae O395]
gi|146315433|gb|ABQ19972.1| rarD protein [Vibrio cholerae O395]
gi|227012042|gb|ACP08252.1| rarD protein [Vibrio cholerae O395]
Length = 302
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ G L Y +WGI P+Y + L VS LE++SHRV+WS + +++
Sbjct: 1 MFMTPDQQDAKKGILLAISVYTMWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIH 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + P+ +L+ +A ++ +W FI+++ S Y++ P+++V
Sbjct: 60 LGRRWRSVVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL LQ A L + + I + + +P++++A+A ++ Y RK I V +
Sbjct: 120 LGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F+E + A Y++W + L L L+ G++ + F+
Sbjct: 180 QTGLFLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAA 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R KLST+G +Y P LM + +V + + + + I F + A+V++ + + +
Sbjct: 240 RLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAAR 299
Query: 313 TKK 315
+
Sbjct: 300 RAR 302
>gi|261317339|ref|ZP_05956536.1| transporter DMT superfamily protein [Brucella pinnipedialis B2/94]
gi|265988377|ref|ZP_06100934.1| transporter DMT superfamily protein [Brucella pinnipedialis
M292/94/1]
gi|261296562|gb|EEY00059.1| transporter DMT superfamily protein [Brucella pinnipedialis B2/94]
gi|264660574|gb|EEZ30835.1| transporter DMT superfamily protein [Brucella pinnipedialis
M292/94/1]
Length = 314
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 24 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 83
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 84 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLA 142
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 143 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + +++ G K + +T+G+M+
Sbjct: 203 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLLRYATLGLMQ 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 263 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHRRNRAQ 313
>gi|291615725|ref|YP_003518467.1| RarD [Pantoea ananatis LMG 20103]
gi|291150755|gb|ADD75339.1| RarD [Pantoea ananatis LMG 20103]
Length = 299
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 85/298 (28%), Positives = 149/298 (50%), Gaps = 2/298 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P Y + ++ V E+++HRV+WS + ++ S
Sbjct: 3 TQQTRQGIGFALGAYFIWGIAPAYFKLVKAVPATEIMTHRVIWSALFMLL-LITLSRSWG 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L+ PK V +L +A + +W FI+A+ + S YF+ P+I+V G +FL
Sbjct: 62 QVRSVLRQPKKVLLLALTAVTVGGNWLLFIWAVNNQHMLEASLGYFINPLINVVFGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ER LQ +A L +L+ G +P+++L +A +++ Y RK I V + G I
Sbjct: 122 RERFRRLQWLAVALAAGGVLLQLWKFGSVPVIALGLAFSFAFYGLMRKKIQVDAQSGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETLWLFPLAALYLFGFADSRTSHLSANPMSLNLLLIAAGIVTTIPLMFFAAACTRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
VG +Y P LM + +V + + + + FG + +A++V++L V S +++ +K+
Sbjct: 242 VGFFQYLGPTLMFLLAVLFYGETVTPDKMVTFGFIWLALLVFILDAVTFSARSRMRKA 299
>gi|265990791|ref|ZP_06103348.1| transporter DMT superfamily protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263001575|gb|EEZ14150.1| transporter DMT superfamily protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 315
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 25 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 84
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 85 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 143
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 144 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 203
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W + +HF G + + L+ G + ++ G K + +T+G+M+
Sbjct: 204 CIPALAYVAWLAATEQDHFVAGPVSNITLLLLAGPFTAIPLILYVGGAKLLRYATLGLMQ 263
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ G+N+ +
Sbjct: 264 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHGRNRAQ 314
>gi|157963643|ref|YP_001503677.1| transporter DMT superfamily protein [Shewanella pealeana ATCC
700345]
gi|157848643|gb|ABV89142.1| RarD protein, DMT superfamily transporter [Shewanella pealeana ATCC
700345]
Length = 295
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 2/290 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G ++ CAY LWG P+Y + L+ VS E++ HRV+WS V I F G + L+
Sbjct: 7 RKGIIYAVCAYTLWGFAPIYFKLLDSVSAAEILLHRVIWSFFFVTILIALFGG-FARLRH 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
LK PK + +L ++ ++A +W FI+A+ S YF+ P+++V L +FL ERL
Sbjct: 66 LLKQPKQLAVLCVTSILIAGNWLLFIWAVNNDHMLDASLGYFINPLVNVSLAMIFLGERL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LQ A L ++I + G IPL+SL +A +++ Y RK + V + G +E +
Sbjct: 126 RKLQWAAVALAATGVMIQLISFGSIPLVSLGLACSFAFYGLLRKKVNVDAKTGLLVETAI 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL Y+ N H F ++ L L+ G++ + F+ R S +G
Sbjct: 186 LLPIALIYLFTNMGDSLSHLFTNDLRLNLLLVAAGIVTTVPLLCFASAAVRIPFSMLGFF 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+Y P +M + ++ + +P D + I F + A+ ++ L + K
Sbjct: 246 QYIGPSIMFILAIALFNEPFDAEKGITFAFIWAALFLFTLDMLYKRKAKK 295
>gi|315127613|ref|YP_004069616.1| transporter [Pseudoalteromonas sp. SM9913]
gi|315016127|gb|ADT69465.1| uncharacterized transport protein [Pseudoalteromonas sp. SM9913]
Length = 306
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 2/298 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G +F A+ +WG+ P+Y + ++ VS E++ HRV+WS+ + +
Sbjct: 2 SIDTEQRKGAIFACLAFFMWGLAPIYFKMIQHVSAFEILMHRVIWSVMFLILVVSVL-NY 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +K L PK + MLV ++T+L +WG FI+A+ S Y++ P+++V LG V
Sbjct: 61 WNKIKRILIQPKLILMLVVTSTLLGFNWGLFIWAINNNHMLDASLGYYINPLLNVLLGMV 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL LQ A L +L+ + G P+++ ++A +++ Y RK + V + G
Sbjct: 121 FLNERLRKLQGAAVALAFTGVLLQLISFGSFPVVAFSLATSFALYGLLRKKLQVDALPGI 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE +L AL Y + + + L+ G++ + F+ KR +
Sbjct: 181 LIEALILLPVALTYWWLMVPTETSNLPANDWLTNALLVSAGIVTTLPLLCFTGAAKRLQY 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+T+G +Y P LM + +V + D R I F + A+ ++ + S K +
Sbjct: 241 TTLGFFQYIGPSLMFILAVVFYGEVFDAERVITFACIWSALAIFSWDSYHQSRKRRKA 298
>gi|291437900|ref|ZP_06577290.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291340795|gb|EFE67751.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 359
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 146/292 (50%), Gaps = 4/292 (1%)
Query: 2 GKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVL 61
+G + E G E ++ +G L F AY +WG+ PL+ LE +E+++HR++
Sbjct: 23 QQGTRRDE--GGPVTEKSAAERRIGLLNGFAAYGMWGLVPLFWPLLEPAGAVEILAHRMV 80
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
WSL V A++ + L + L+ P+ + ++ +AT++ V+WG +I+A+ + S
Sbjct: 81 WSLFFVGAALLVVRR-WAWLGELLRQPRRLALITVAATVITVNWGVYIWAVNSGHVVEAS 139
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSA 180
YF+ P++++ +G + LKERL Q A + ++L++T+ G P +A++++
Sbjct: 140 LGYFINPLVTIAMGVLLLKERLRSAQWAAVGVGASAVLVLTVGYGHPPWISLCLALSFAT 199
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
Y +K + +G E E V +PAL Y++W G GG F L G++
Sbjct: 200 YGLVKKKVDLGGVESLAAETAVQFLPALGYLLWLGARGGSTFTTEGAGHVALLASTGIVT 259
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ F R LST+G+++Y P+ + V K+ + R F +
Sbjct: 260 ALPLVCFGTAAIRVPLSTLGLLQYMTPVFQFLLGVLYFKEAMPPERWAGFAL 311
>gi|317494836|ref|ZP_07953247.1| RarD protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917161|gb|EFV38509.1| RarD protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 296
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 88/295 (29%), Positives = 147/295 (49%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S T G LF AY +WGI P Y + ++QV E+++HRV+WS + ++ S S
Sbjct: 3 SQQTRHGILFALAAYFIWGIAPAYFKLIQQVPPTEILTHRVIWSFFFML-VLLSLSKNWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ K P +G+L SA ++ +W FI+A+ S YF+ P+++V LG VFL
Sbjct: 62 KVRALAKTPAKIGLLALSACLIGGNWLLFIWAVNNNHMLEASLGYFINPLVNVLLGVVFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q IA L + +LI G +P++SL +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWIALALAVCGVLIQLWKFGSVPVISLGLAFSFAFYGLIRKKIAVDAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H I L LI G++ + F+ R +LST
Sbjct: 182 ETLWLLPIAAIYLFGIADSATSHLSANPISLNLLLIAAGIVTTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + ++ + + + + FG + A+++++L + K ++
Sbjct: 242 LGFFQYLGPTLMFILAITFYNEQMTQDKLVAFGFIWAALLLFILDALYTQRKLRS 296
>gi|17987552|ref|NP_540186.1| chloramphenicol-sensitive protein RARD [Brucella melitensis bv. 1
str. 16M]
gi|260563725|ref|ZP_05834211.1| RarD protein [Brucella melitensis bv. 1 str. 16M]
gi|17983256|gb|AAL52450.1| chloramphenicol-sensitive protein rard [Brucella melitensis bv. 1
str. 16M]
gi|260153741|gb|EEW88833.1| RarD protein [Brucella melitensis bv. 1 str. 16M]
Length = 314
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 24 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 83
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 84 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 142
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 143 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W + +HF G + + L+ G + ++ G K + +T+G+M+
Sbjct: 203 CIPALAYVAWLAATEQDHFVAGPVSNITLLLLAGPFTAIPLILYVGGAKLLRYATLGLMQ 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ G+N+ +
Sbjct: 263 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHGRNRAQ 313
>gi|306845281|ref|ZP_07477857.1| RarD protein [Brucella sp. BO1]
gi|306274440|gb|EFM56247.1| RarD protein [Brucella sp. BO1]
Length = 306
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 81/300 (27%), Positives = 160/300 (53%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G L AY LWG P Y + L V +EV+SHRV+WS+P ++
Sbjct: 7 SDTRLSDSSRGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLG 66
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+L + P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG
Sbjct: 67 QFRGILSAV-RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLG 125
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL Q +A L ++++++T++ G+P +SL + +++ Y F RK++P+ +
Sbjct: 126 RLFLGERLTKTQYVAVGLAFVAVVLLTINAGGLPWVSLVLPISFGLYGFFRKSLPMPPLQ 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GF +E+ +L IPAL YV W +G +HF G + + L+ G + +++ G K
Sbjct: 186 GFTLEVLILCIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLL 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ +T+G+M+Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 246 RYATLGLMQYMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHRRNRAQ 305
>gi|242280531|ref|YP_002992660.1| RarD protein, DMT superfamily transporter [Desulfovibrio salexigens
DSM 2638]
gi|242123425|gb|ACS81121.1| RarD protein, DMT superfamily transporter [Desulfovibrio salexigens
DSM 2638]
Length = 299
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 89/286 (31%), Positives = 160/286 (55%), Gaps = 2/286 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + A+ILWG+ P+Y + LE+V LE++ +R++WSL V ++ + +K L
Sbjct: 8 GIFYAAAAFILWGLLPVYWKSLEEVPALELLCNRIVWSLFFV-AILLSCKKRWAEVKSAL 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ K +L S+ ++ +W +I+A+ TS Y++TP+++ LG +F+KERLN
Sbjct: 67 ADKKGKILLTISSCLIGTNWFVYIWAVNHNHVVDTSMGYYMTPLMNALLGFIFMKERLNR 126
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ+IA L ++ + G P ++L +AV+++ Y RK + V S G F+E VLA
Sbjct: 127 LQVIAITLAACGVVYSIIDFGHIPYIALTLAVSFAFYGLVRKVMKVESLPGLFVETAVLA 186
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ Y++W FSG + ++ D + L+G G S F++G +R +L T+G+M+Y
Sbjct: 187 PLSAIYLLWLAFSGEISIYKISLMDNILLLGAGAATSLPLIFFAHGARRLRLVTLGMMQY 246
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
AP L ++ VF+ ++P ++ R + F + + VY+ + + K
Sbjct: 247 IAPTLALMLGVFVYEEPFNSARLVTFAFIWSGIAVYVADGLNKNFK 292
>gi|306842055|ref|ZP_07474728.1| RarD protein [Brucella sp. BO2]
gi|306287896|gb|EFM59316.1| RarD protein [Brucella sp. BO2]
Length = 306
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 80/300 (26%), Positives = 160/300 (53%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G L AY LWG P Y + L V +EV+SHRV+WS+P ++
Sbjct: 7 SDTRLSDSSRGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLG 66
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+L + P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG
Sbjct: 67 QFRGILSAV-RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLG 125
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+F+ ERL Q +A L ++++++T++ G+P +SL + +++ Y F RK++P+ +
Sbjct: 126 RLFMGERLTKTQYVAVGLAFVAVVLLTINAGGLPWVSLVLPISFGLYGFFRKSLPMPPLQ 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GF +E+ +L IPAL YV W +G +HF G + + L+ G + +++ G K
Sbjct: 186 GFTLEVLILCIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLL 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ +T+G+M+Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 246 RYATLGLMQYMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHRRNRVQ 305
>gi|229086146|ref|ZP_04218366.1| hypothetical protein bcere0022_27450 [Bacillus cereus Rock3-44]
gi|228697205|gb|EEL49970.1| hypothetical protein bcere0022_27450 [Bacillus cereus Rock3-44]
Length = 325
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 159/317 (50%), Gaps = 6/317 (1%)
Query: 2 GKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVL 61
K ++ + + A G L+ AY++WG+ P+Y +++E+V E+++HR++
Sbjct: 1 MKRKKRRGEKGKMESQKALQQ--KGILYAAGAYMMWGVLPIYWKWVEEVPAEEILAHRIV 58
Query: 62 WSLPGVFFAI---VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGF 118
W+ + F + F + L K PK L ++ +++ +W +I+A+
Sbjct: 59 WAFVFMLFILGISKRFGKFVGELLSLFKRPKLFISLTIASILISGNWFVYIWAVNHNHII 118
Query: 119 LTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVT 177
S Y++ P++S+ LG++ LKE+LN Q +A L + ++I+T G IP ++L++A+T
Sbjct: 119 EASLGYYINPLVSILLGTIVLKEKLNFWQYVAVGLAGIGVIILTFRYGTIPWIALSLALT 178
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
++ Y +K + + G +E ++ A+ Y+ NG G F + TL L+G G
Sbjct: 179 FALYGLTKKLLNYDAMIGLTMETMIVTPLAVIYLFMNGEHGFGSFGSISPVSTLLLMGAG 238
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++ + F+ G + L +G ++Y +P + ++ VFI + + + F + +A+
Sbjct: 239 IVTAVPLFYFAKGAQLIPLYMIGFLQYISPTINLILGVFIFHEHFTSTHMVAFFFIWVAL 298
Query: 298 VVYLLPTVINSGKNKTK 314
V+ + + + K
Sbjct: 299 FVFSMAKTKFLLRKQPK 315
>gi|157373530|ref|YP_001472130.1| rarD protein [Shewanella sediminis HAW-EB3]
gi|157315904|gb|ABV35002.1| rarD protein [Shewanella sediminis HAW-EB3]
Length = 298
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G F CAY LWG LY + L+ VS E++ HRV+WS V + F G S
Sbjct: 4 SEHRKGIAFALCAYTLWGFAALYFKLLDHVSATEILIHRVIWSFVFVTMLMFIFGG-FSR 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ LK PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG VFL
Sbjct: 63 LRQVLKRPKQLAVLTLTSVLIAGNWLLFIWAVNNDHMLDASLGYFINPLVNVMLGMVFLS 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ A L +L+ + G IPL+SL +A ++ Y RK + V + G +E
Sbjct: 123 ERLRKLQWCAVALAGAGVLVQLISFGSIPLVSLGLAFSFGLYGLLRKKVNVDAKTGLLVE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L A+ Y+ N + + + L L+ G++ + F+ R LS +
Sbjct: 183 TAILFPIAMIYLFANMGDALTNLMTNTLSNNLLLMAAGIVTTIPLLCFAAAAVRIPLSML 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G +Y P +M + +V + K+P D + I F + A++++ + + K
Sbjct: 243 GFFQYIGPSIMFILAVTLYKEPFDLEKGITFAFIWSALILFSIDMLYKRKK 293
>gi|83855238|ref|ZP_00948768.1| RarD [Sulfitobacter sp. NAS-14.1]
gi|83843081|gb|EAP82248.1| RarD [Sulfitobacter sp. NAS-14.1]
Length = 308
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 90/304 (29%), Positives = 171/304 (56%), Gaps = 2/304 (0%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPG 66
+ + ++ T G F AY LWG PLY + + + E++ HRV+WS+P
Sbjct: 2 RNPDTLSNTQPAPPEDTPQGLAFAIGAYGLWGFLPLYMKAIAHIPAAEIVVHRVVWSVPV 61
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
++ + L++ ++P+ + M +AT+++V+WG +I+A+ + + Y++
Sbjct: 62 GALVLILLGRT-ATLREAFRSPRTLAMGCVTATLISVNWGIYIWAVNSGHALDAALGYYI 120
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFAR 185
P+ S+ LG++ L ERL+ LQ+ A L +++ I+TL SG P ++L++ +T+ Y A+
Sbjct: 121 NPLFSILLGALLLGERLSRLQLAAIGLAAVAVAILTLDSGRFPWVALSLTLTFGLYALAK 180
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
K +P+G ++GF +E+ +L PAL Y+V+ +G HF G +T L+G G++ +
Sbjct: 181 KRLPIGPNQGFLLEVLILLAPALAYLVYLIMTGQNHFGQGVPFNTWMLVGCGVVTAVPLI 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ G KR +LST+GI++Y AP ++ + +V + +P R I F ++ A+V+Y +
Sbjct: 241 FYANGAKRLRLSTIGILQYIAPTMIFLCAVLVFDEPFGRARMIAFPLIWGALVIYSISLF 300
Query: 306 INSG 309
Sbjct: 301 RQMR 304
>gi|327395990|dbj|BAK13412.1| protein RarD RarD [Pantoea ananatis AJ13355]
Length = 299
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 85/298 (28%), Positives = 149/298 (50%), Gaps = 2/298 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P Y + ++ V E+++HRV+WS + ++ S
Sbjct: 3 TQQTRQGIGFALGAYFIWGIAPAYFKLVKAVPATEIMTHRVIWSALFMLL-LITLSRSWG 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L+ PK V +L +A + +W FI+A+ + S YF+ P+I+V G +FL
Sbjct: 62 QVRSVLRQPKKVLLLALTAVTVGGNWLLFIWAVNNQHMLEASLGYFINPLINVVFGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ER LQ +A L +L+ G +P+++L +A +++ Y RK I V + G I
Sbjct: 122 RERFRRLQWLAVALAAGGVLLQLWKFGSVPVIALGLAFSFAFYGLMRKKIQVDAQSGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETLWLFPLAALYLFGFADSSTSHLSANPMSLNLLLIAAGIVTTIPLMFFAAACTRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
VG +Y P LM + +V + + + + FG + +A++V++L V S +++ +K+
Sbjct: 242 VGFFQYLGPTLMFLLAVLFYGETVTPDKMVTFGFIWLALLVFILDAVAFSARSRMRKA 299
>gi|239943520|ref|ZP_04695457.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
gi|239989974|ref|ZP_04710638.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
gi|291446988|ref|ZP_06586378.1| rarD [Streptomyces roseosporus NRRL 15998]
gi|291349935|gb|EFE76839.1| rarD [Streptomyces roseosporus NRRL 15998]
Length = 326
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L+ AY +WG+ PL+ LE +E+++HR++WSL GV + +
Sbjct: 4 KNEQRAGLLYGIGAYGMWGLVPLFWPLLEPSGAIEILAHRMVWSL-GVVAVALLVVRRWA 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +++ + +G++ +A ++V+WG +I+A+ S YF+ P++++ LG + L
Sbjct: 63 WIGELVRDRRKLGLISVAAATISVNWGLYIWAVNNGHVVEASLGYFINPLVTIALGVLLL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL Q A + + ++L++ + G P +SL +A +++ Y A+K + +G E
Sbjct: 123 GERLRPAQWAAVAISVAAVLVLAIGYGKPPWVSLVLAFSFATYGLAKKKVNMGGLESLAA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E VL +PAL +++W +G F G L G++ + F R LST
Sbjct: 183 ETAVLFVPALGFLLWLAATGESTFTAGGTGHGFLLAATGIVTALPLICFGAAAIRVPLST 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G+++Y AP+ V + + R F +V +A+ + + + +N+
Sbjct: 243 LGLLQYLAPVFQFGLGVLYFHEAMPPERWAGFALVWLALSLLTWDALRTARRNR 296
>gi|225627177|ref|ZP_03785215.1| RarD protein [Brucella ceti str. Cudo]
gi|254701463|ref|ZP_05163291.1| RarD protein [Brucella suis bv. 5 str. 513]
gi|254713805|ref|ZP_05175616.1| RarD protein [Brucella ceti M644/93/1]
gi|254717137|ref|ZP_05178948.1| RarD protein [Brucella ceti M13/05/1]
gi|256060805|ref|ZP_05450965.1| RarD protein [Brucella neotomae 5K33]
gi|256159406|ref|ZP_05457184.1| RarD protein [Brucella ceti M490/95/1]
gi|256254700|ref|ZP_05460236.1| RarD protein [Brucella ceti B1/94]
gi|256369115|ref|YP_003106623.1| rarD protein [Brucella microti CCM 4915]
gi|260168431|ref|ZP_05755242.1| rarD protein [Brucella sp. F5/99]
gi|261218952|ref|ZP_05933233.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221880|ref|ZP_05936161.1| transporter DMT superfamily protein [Brucella ceti B1/94]
gi|261321549|ref|ZP_05960746.1| transporter DMT superfamily protein [Brucella ceti M644/93/1]
gi|261752006|ref|ZP_05995715.1| transporter DMT superfamily protein [Brucella suis bv. 5 str. 513]
gi|261757893|ref|ZP_06001602.1| RarD protein [Brucella sp. F5/99]
gi|294852042|ref|ZP_06792715.1| RarD protein [Brucella sp. NVSL 07-0026]
gi|225618012|gb|EEH15056.1| RarD protein [Brucella ceti str. Cudo]
gi|255999275|gb|ACU47674.1| rarD protein [Brucella microti CCM 4915]
gi|260920464|gb|EEX87117.1| transporter DMT superfamily protein [Brucella ceti B1/94]
gi|260924041|gb|EEX90609.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294239|gb|EEX97735.1| transporter DMT superfamily protein [Brucella ceti M644/93/1]
gi|261737877|gb|EEY25873.1| RarD protein [Brucella sp. F5/99]
gi|261741759|gb|EEY29685.1| transporter DMT superfamily protein [Brucella suis bv. 5 str. 513]
gi|294820631|gb|EFG37630.1| RarD protein [Brucella sp. NVSL 07-0026]
Length = 306
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 135 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + +++ G K + +T+G+M+
Sbjct: 195 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLLRYATLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 255 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHRRNRAQ 305
>gi|229821681|ref|YP_002883207.1| RarD protein, DMT superfamily transporter [Beutenbergia cavernae
DSM 12333]
gi|229567594|gb|ACQ81445.1| RarD protein, DMT superfamily transporter [Beutenbergia cavernae
DSM 12333]
Length = 333
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 9/308 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
AS P G AY+LWG+ PLY LE +E+I+HRV+WSL +
Sbjct: 1 MPPASPPDRWGVPLGVSAYVLWGVLPLYLALLEPAGPVEIIAHRVVWSLLFCLVGLALAR 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G S L + V +A ++ V+W F++A+ + YF+ P+++ L
Sbjct: 61 GMRSYLTVLRTPRLLRPLAV-AAVLVGVNWTVFVFAVQAGHVIDAALGYFINPLVTALLA 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGS 192
+ L+ERL +Q A L ++++++T+ G R VG+
Sbjct: 120 VLVLRERLRPVQWAALGLSGVAVVVITVGYGTLPWVALALAGSFGLYGLVKNRVGRDVGA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-----NIPDTLFLIGYGLLNSFVFCIF 247
G E VLA AL Y+VW +G F + L L+ G + +F
Sbjct: 180 LPGLAAETTVLAPLALGYLVWLALTGTAAFGQPGADATPVGYALLLMAAGPATAIPLLLF 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ +R L+++ ++Y APL+ V + + + R + F +V +A+ + +
Sbjct: 240 AGAARRLPLASMASLQYLAPLMQFGLGVVVFGEEMPLARWVGFVLVWVALAALTVDGLRA 299
Query: 308 SGKNKTKK 315
+ + +
Sbjct: 300 ARATRLLR 307
>gi|322419270|ref|YP_004198493.1| RarD protein, DMT superfamily transporter [Geobacter sp. M18]
gi|320125657|gb|ADW13217.1| RarD protein, DMT superfamily transporter [Geobacter sp. M18]
Length = 303
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 79/293 (26%), Positives = 153/293 (52%), Gaps = 2/293 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A+ + G ++ AY+ WG P+Y + ++ V +E++SHR++WSL + ++ + GG
Sbjct: 11 TAAQKSRQGVIYGLAAYLCWGFFPVYFKSVKVVPPIEMVSHRIVWSLAFLLL-LITWKGG 69
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ D L+ PK++ +L+ + ++A +W FIYA+ + +S YF+ P+++V LG +
Sbjct: 70 WPGMLDVLRRPKSLAVLLATTILIATNWLVFIYAISVGEVLQSSLGYFINPLVNVLLGFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL+ERL+ Q I+ L +L +T+ G +P +SL +A+++ Y RK + V G
Sbjct: 130 FLRERLDRPQWISLGLATTGVLYLTIQYGSMPWISLILALSFGLYGLIRKVLHVEPLVGL 189
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E +L ALFY+V G F + + G++ + +F+ K+ +L
Sbjct: 190 TVETLLLMPFALFYLVQLNQKGTGIFLTHGHALDVLIPMSGVITAIPLLLFAAAGKKLRL 249
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+T+G ++Y P + + ++ I + I F + +V+Y L +
Sbjct: 250 ATIGFLQYITPTMHFLLAITIFGETFTHTHLISFMFIWAGLVLYSLHAYRSVR 302
>gi|265999538|ref|ZP_05466824.2| RarD protein [Brucella melitensis bv. 2 str. 63/9]
gi|263094552|gb|EEZ18361.1| RarD protein [Brucella melitensis bv. 2 str. 63/9]
Length = 315
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 25 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 84
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 85 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 143
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 144 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 203
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + ++ G K + +T+G+M+
Sbjct: 204 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYVGGAKLLRYATLGLMQ 263
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ G+N+ +
Sbjct: 264 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHGRNRAQ 314
>gi|94312475|ref|YP_585685.1| RarD protein [Cupriavidus metallidurans CH34]
gi|93356327|gb|ABF10416.1| putative chloramphenicol resistance permease [Cupriavidus
metallidurans CH34]
Length = 304
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 73/291 (25%), Positives = 147/291 (50%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + AYI+WG+ PLY + L V+ LE++ HR++WSL + +++ L++
Sbjct: 3 LGIFYALLAYIIWGLLPLYIKSLHGVAPLEILLHRMVWSLVFLGAILLW-RRHFGWLREV 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
NP+ V SA +L +W +I+A+ + S YF+ P+ SV LG + L ERL
Sbjct: 62 AANPRLVLNFGASAALLCCNWFLYIWAVSADRVVDASLGYFINPLFSVLLGVLLLHERLR 121
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q ++ + ++ +T+ +G P ++L +A ++ Y RKT +G+ EG +E +L
Sbjct: 122 PVQWLSIAIAAAGVIWLTVTAGQLPWIALGLAASFGGYGLLRKTGALGALEGLSLETLLL 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + +G + + L+ G + + F+ G +R LS +G+++
Sbjct: 182 FPFAAAALAFLFLTGQDTTRAAAPGTQVLLVMAGPITAVPLLFFAAGARRIPLSLLGLLQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P L + +++ +P + I + ++ +++ +Y ++ S + K
Sbjct: 242 YAGPTLQLALGIWLYHEPFPPQKQIGYALIWVSLAIYAAEGLLVSKLLQRK 292
>gi|300714806|ref|YP_003739609.1| RarD family protein [Erwinia billingiae Eb661]
gi|299060642|emb|CAX57749.1| RarD family protein [Erwinia billingiae Eb661]
Length = 300
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 150/295 (50%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P Y + L+QV+ E+++HRV+WS + + S +
Sbjct: 3 AQHTRQGIFFALGAYFIWGIAPAYFKLLQQVAPGEIMTHRVIWSFFFMLLLV-SLSRNWA 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K L+ PK + ML SAT++ +W FI+A+ + S YF+ P+++V +G VFL
Sbjct: 62 KVKLILQQPKKILMLAVSATVICANWLIFIWAVNNQHILEASLGYFINPLLNVVVGMVFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KER LQ +A L +LI G +P++++ +AVT+SAY RK I V + G +
Sbjct: 122 KERFRRLQWLAVALAACGVLIQLWKFGSVPIIAIGLAVTFSAYGLIRKKIGVDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + +F+ R +LST
Sbjct: 182 ETSWLLPVAAIYLFGIADSSTSHLSQNPLTLNLLLVAAGIVTTIPLMLFTAACSRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
VG +Y P LM + +V + + + + F + A+ +++L V +++
Sbjct: 242 VGFFQYLGPTLMFLLAVVFYGEHMTPDKVVTFSFIWAALALFILDAVWTLKRSRQ 296
>gi|260774490|ref|ZP_05883404.1| RarD protein [Vibrio metschnikovii CIP 69.14]
gi|260610617|gb|EEX35822.1| RarD protein [Vibrio metschnikovii CIP 69.14]
Length = 303
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 80/292 (27%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G AY +WG+ P+Y + L VS LE++SHR++WS + +++FS
Sbjct: 5 QQQEAKKGIFLAISAYTMWGVAPIYFKLLGHVSPLEILSHRIIWSF-FLLAGLLHFSHQW 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ D ++ +G L+ +A ++ +W FI+A+ S Y++ P+++VFLG +F
Sbjct: 64 RHVVDIFQSKIKLGYLLITALLIGGNWLIFIWAINANHMLDASLGYYINPILNVFLGMLF 123
Query: 139 LKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ A LL ++ + I + + +P+++L +A T+ Y RK + VG+ G F
Sbjct: 124 LGERLRKLQWFAVLLAMIGVGIQLVVFGSLPVVALVLATTFGLYGLLRKKVGVGAQSGLF 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE L A Y+ + H + L LI G++ + F+ R KLS
Sbjct: 184 IETLFLLPVAALYLFMLADTPTSHLSNNDWSLNLLLISAGIITTLPLLCFTGAATRLKLS 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G +Y P M + +V + + + I F + A++ + +
Sbjct: 244 TLGFFQYIGPSFMFLLAVLVYGEAFSADKAITFVFIWGALIAFSYDGLTYKR 295
>gi|260757660|ref|ZP_05870008.1| transporter DMT superfamily protein [Brucella abortus bv. 4 str.
292]
gi|260667978|gb|EEX54918.1| transporter DMT superfamily protein [Brucella abortus bv. 4 str.
292]
Length = 314
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 24 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 83
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 84 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 142
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 143 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + ++ G K + +T+G+M+
Sbjct: 203 CIPALAYVAWLAATGQDHFVTGPVSNITLLLLAGPFTAIPLILYVGGAKLLRYATLGLMQ 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ G+N+ +
Sbjct: 263 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHGRNRAQ 313
>gi|254707616|ref|ZP_05169444.1| RarD protein [Brucella pinnipedialis M163/99/10]
gi|254709801|ref|ZP_05171612.1| RarD protein [Brucella pinnipedialis B2/94]
gi|256031292|ref|ZP_05444906.1| RarD protein [Brucella pinnipedialis M292/94/1]
gi|261315106|ref|ZP_05954303.1| transporter DMT superfamily protein [Brucella pinnipedialis
M163/99/10]
gi|261304132|gb|EEY07629.1| transporter DMT superfamily protein [Brucella pinnipedialis
M163/99/10]
Length = 306
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLA 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 135 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + +++ G K + +T+G+M+
Sbjct: 195 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLLRYATLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 255 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHRRNRAQ 305
>gi|309780637|ref|ZP_07675379.1| protein RarD [Ralstonia sp. 5_7_47FAA]
gi|308920560|gb|EFP66215.1| protein RarD [Ralstonia sp. 5_7_47FAA]
Length = 300
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 2/295 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N S G +F F AY +WG+ PLY + L+ VS +E++SHRV+WSL + ++
Sbjct: 2 NMSGSNRNGVIFAFLAYTMWGLFPLYFKLLKAVSPIEILSHRVIWSLAVMVVILLV-KRH 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ L K P+ VG S ++LA +W +I+A+ S YF+ P++ V L ++
Sbjct: 61 GAWLWALRKQPRVVGRYAASTSLLAANWLTYIWAVNHDHVLEASLGYFINPLVVVMLAAL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L ERL +Q ++ L + +T +G P ++LA+A ++ Y RKT P+G+ EG
Sbjct: 121 VLGERLRPVQWVSVALAAAGVAWLTWQAGTLPWIALALAFSFGLYGLLRKTSPLGALEGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E +L AL Y+ W F + L G L + +F G +R L
Sbjct: 181 TLETLLLFPLALAYLGWLASQHQNAFLAASPGTQWLLALAGPLTALPLLLFGAGARRIPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
S +G+++Y +P L ++ V++ +P + + ++ + VY + + +
Sbjct: 241 SLLGLLQYVSPTLQLLLGVWLYNEPFAGPKVAGYVLIWAGLAVYSAESWMRLRRR 295
>gi|77361485|ref|YP_341060.1| uncharacterized transport protein [Pseudoalteromonas haloplanktis
TAC125]
gi|76876396|emb|CAI87618.1| conserved protein of unknown function ; putative uncharacterized
transport protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 306
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 71/295 (24%), Positives = 144/295 (48%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + A+ +WG+ P+Y + L+ V+ E+++HRV+WS+ + + +
Sbjct: 5 TEKRKGAILACIAFTIWGLAPIYFKQLQHVTAFEILTHRVVWSVMFLIIIVSILGQWDRI 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ + +++ +++IL +WG FI+A+ S Y++ P+++V LG +FL
Sbjct: 65 KRIIVQPKLLLMLVL-TSSILGFNWGLFIWAVNNNHMLDASLGYYINPLLNVLLGVLFLG 123
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q++A L +L+ + G P+++ ++A++++ Y RK +PV + G IE
Sbjct: 124 ERLRKFQMVAVALAFTGVLLQLISFGSFPVVAFSLAISFAIYGLLRKKLPVEALSGISIE 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L AL Y + + + LI G++ + F+ KR + +T+
Sbjct: 184 AFILLPVALIYWYLMVPTATSSLPANDWHTNVLLISAGIITTLPLLCFTGAAKRLQYTTL 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G +Y P LM + +V + + D R + F + A+ ++ + S K K
Sbjct: 244 GFFQYIGPSLMFILAVMLYGEVFDAERVVTFVCIWSALAIFSWDSFRQSRKRKKA 298
>gi|23501567|ref|NP_697694.1| rarD protein [Brucella suis 1330]
gi|161618649|ref|YP_001592536.1| RarD protein [Brucella canis ATCC 23365]
gi|254704010|ref|ZP_05165838.1| RarD protein [Brucella suis bv. 3 str. 686]
gi|261754665|ref|ZP_05998374.1| transporter DMT superfamily protein [Brucella suis bv. 3 str. 686]
gi|23347479|gb|AAN29609.1| rarD protein [Brucella suis 1330]
gi|161335460|gb|ABX61765.1| RarD protein [Brucella canis ATCC 23365]
gi|261744418|gb|EEY32344.1| transporter DMT superfamily protein [Brucella suis bv. 3 str. 686]
Length = 306
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 135 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + +++ G K + +T+G+M+
Sbjct: 195 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLLRYATLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 255 YMTPTMLFFFAIFIFHEPFSTAQLAAFLLIWAGLALYTWSSLSQHRRNRAQ 305
>gi|260566741|ref|ZP_05837211.1| RarD protein [Brucella suis bv. 4 str. 40]
gi|260156259|gb|EEW91339.1| RarD protein [Brucella suis bv. 4 str. 40]
Length = 306
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 135 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYSFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + +++ G K + +T+G+M+
Sbjct: 195 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLLRYATLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ +N+ +
Sbjct: 255 YMTPTMLFFFAIFIFHEPFSTAQLAAFLLIWAGLALYTWSSLSQHRRNRAQ 305
>gi|317046400|ref|YP_004114048.1| RarD protein, DMT superfamily transporter [Pantoea sp. At-9b]
gi|316948017|gb|ADU67492.1| RarD protein, DMT superfamily transporter [Pantoea sp. At-9b]
Length = 299
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 81/298 (27%), Positives = 154/298 (51%), Gaps = 2/298 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G + AY LWG+ P Y + +++V E+++HRV+WS+ + ++ S +
Sbjct: 3 TQHTRQGIGYALGAYFLWGVAPAYFKLVKEVPPTEIMTHRVIWSVLFMLL-LITLSRNWN 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ L+ PK V +L +A + +W +I+A+ + S YF++P+ +V LG +F+
Sbjct: 62 LVCSVLRQPKKVLLLAITAFTIGGNWLLYIWAVNNQHILEASLGYFISPLFNVVLGMLFM 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ER LQ +A LL L +L+ G +P+++L +A+T++ Y RK I V + G I
Sbjct: 122 RERFRPLQWLAVLLAALGVLVQLWKFGSVPMIALGLALTFAFYGLMRKKIQVDAQSGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + A+ Y+ S H + L LI G++ + +F+ R +LST
Sbjct: 182 ETLWMFPLAVIYLFGFADSATSHLSANPLSLNLKLIAAGIVTTVPLMLFAAACTRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+G +Y P LM + +V + + + + FG + +A+ +++ I S + + + +
Sbjct: 242 IGFFQYLGPTLMFLLAVLFYGESVTPDKMVTFGFIWLALAFFIVDAAIASARTRVRIA 299
>gi|332994950|gb|AEF05005.1| hypothetical protein ambt_17515 [Alteromonas sp. SN2]
Length = 316
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 85/290 (29%), Positives = 149/290 (51%), Gaps = 3/290 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + AY +WGI P+Y + L + E++ HRV+WS+ + I + + L
Sbjct: 12 GIICAIAAYTMWGIAPIYFKQLTVLPAAEILMHRVIWSVLVLVGLIAGLKQ-WAKVAAAL 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+N K + +L + +L +W FI+A+ S Y++ P+I+VFLG +FL ERL
Sbjct: 71 RNKKVMQVLFVAGILLGANWLLFIWAVNNDHILDASLGYYINPLINVFLGRLFLGERLRT 130
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A +L I+ + I+ G P ++L +A ++S Y RK + V S G FIE +L+
Sbjct: 131 FQRVAVVLAIVGVAILIFSYGRVPWIALILAGSFSIYGILRKQVAVDSLPGLFIETLMLS 190
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y + G F + + ++ G++ + F+ +R ST+G ++Y
Sbjct: 191 PLAIGYWLLFGSEYSNLFN-NDASLNMLILAAGVVTTAPLLCFTAAARRIMYSTLGFLQY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P LM V +V++ +P+D R I FG V +A+ V+ + ++I K +
Sbjct: 250 IGPTLMFVLAVYLYDEPLDEARLITFGFVWLALAVFSVDSLIAYKKQRKA 299
>gi|311112072|ref|YP_003983294.1| DMT superfamily drug/metabolite transporter RarD [Rothia
dentocariosa ATCC 17931]
gi|310943566|gb|ADP39860.1| DMT superfamily drug/metabolite transporter RarD [Rothia
dentocariosa ATCC 17931]
Length = 369
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 6/315 (1%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWS 63
AT + G + A T G + +F Y +WG+ PLY + S LE++ RV++S
Sbjct: 7 SATASTSAPGTAAHAAQ--TRNGFICLFTTYAIWGMLPLYFYLMASSSALEIVLSRVIFS 64
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
L + F ++ P+ +G+L ++ ++ +W ++Y+ S
Sbjct: 65 LAFCAVLLPIFRLTKP-FNQAVRTPRTMGILTVASLLIGANWMIYVYSTTHGHTIDMSLG 123
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC- 182
YF+ P++SV LG VFL ERL +Q +A + +++LIM++ G
Sbjct: 124 YFINPLVSVVLGVVFLHERLRKVQWLAIGISTVAVLIMSVVYGQIPWLGLGVAFTFGTYG 183
Query: 183 --FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
AR V +E +L AL + W G F L G++
Sbjct: 184 LLKARVGSSVHPVVSLSLETFILLPVALVVLWWMNTQGQLTLFSQGPGHFWLLASTGIVT 243
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+FS + LS +G+++Y P + ++F+L I + I ++ +A+V++
Sbjct: 244 VTPLVLFSAAARALPLSVIGMVQYMGPTIQFFLALFVLHDRITPDKWIGLSLIWVAIVIF 303
Query: 301 LLPTVINSGKNKTKK 315
+ + S ++ K
Sbjct: 304 TVDAMRASRTSRPSK 318
>gi|29831416|ref|NP_826050.1| hypothetical protein SAV_4873 [Streptomyces avermitilis MA-4680]
gi|29608531|dbj|BAC72585.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 326
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/298 (22%), Positives = 136/298 (45%), Gaps = 3/298 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L AY +WG+ PLY L+ +E+++HR++WSL V A++
Sbjct: 9 SKSEQRTGLLNGVAAYGMWGLVPLYWPLLKPAGAVEILAHRMVWSLALVAVALLVMRR-W 67
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + L+ P+ + ++ +A ++ V+WG +I+A+ S YF+ P++++ LG +
Sbjct: 68 AWAGELLRQPRKLALVTVAAAVITVNWGVYIWAVNAGHVVEASLGYFINPLVTIALGVLI 127
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFF 197
LKER+ Q A + +++++T+ G P +A ++ Y +K + +G E
Sbjct: 128 LKERMRPWQWAAVGVAFTAVVVLTVGYGQPPWISLCLAFSFGTYGLVKKKVNLGGIESLA 187
Query: 198 IEMCVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E + +PAL + + G G L G++ + F R L
Sbjct: 188 AETAIQFLPALAYLLWLTASGGSTFGTQGGAGHAALLASTGVVTAIPLVCFGAAAIRVPL 247
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
ST+G+++Y AP+ + + + + R F +V +A+ + + + +
Sbjct: 248 STLGLLQYLAPVFQFLLGILYFHEAMPPERWAGFALVWLALSLLTWDALRAAHRASRA 305
>gi|157368439|ref|YP_001476428.1| transporter DMT superfamily protein [Serratia proteamaculans 568]
gi|157320203|gb|ABV39300.1| RarD protein, DMT superfamily transporter [Serratia proteamaculans
568]
Length = 295
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P Y + ++QV E+++HRV+WS + A++ S
Sbjct: 3 AQQTRQGIFFALAAYFIWGIAPAYFKLIQQVPADEILTHRVIWSFFFML-ALITLGRNWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + K + +L +A ++ +W FI+A+ S YF+ P+++V LG +FL
Sbjct: 62 QVRAACHDRKRLLLLAVTALLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNVLLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A +++ Y RK I + + G I
Sbjct: 122 GERFRRMQWLAVALAFAGVLIQLWQFGSLPIIGLGLAFSFAFYGLLRKKIAIDAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAAYLFLFADSPTSHLGANAWSLNLLLVAAGIVTTIPLLFFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G +Y P LM + +V + + + + FG + A+++++L + K +
Sbjct: 242 LGFFQYLGPTLMFLLAVTFYGETVGQDKLVTFGFIWAALLLFILDALYTQRKLR 295
>gi|89074460|ref|ZP_01160937.1| putative RarD [Photobacterium sp. SKA34]
gi|89049748|gb|EAR55298.1| putative RarD [Photobacterium sp. SKA34]
Length = 301
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 88/302 (29%), Positives = 150/302 (49%), Gaps = 2/302 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E+ + G + AY +WGI PLY + + V LE++SHRV+WS + I FS
Sbjct: 1 MEDNNNLAKRGIILAISAYTMWGIAPLYFKSIASVPPLEILSHRVIWSFFFLALII-AFS 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+K PK + +L SA ++ +W FI+A+ S Y++ P+++V LG
Sbjct: 60 RQWGRVKTVFTQPKTLFLLTISALLVGCNWLIFIWAVNNNHLLDASLGYYINPLLNVLLG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L ERL HLQ A L+ + ++ + G P ++ A+A ++ Y RK I + +
Sbjct: 120 MLLLGERLRHLQWGAVLIAAVGVIAELIQFGSLPWIAFALATSFGFYGLLRKKINIDAQT 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE VL A Y+ + S + +I L L+ G++ + F+ +
Sbjct: 180 GLFIETFVLLPLAAIYLFFISSSPTANLTDNSIDLNLLLVAAGIVTTLPLLCFTGAATKL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G ++Y P LM V + FI K+P I FG + +A++++ + + ++
Sbjct: 240 KLSTLGFLQYIGPSLMFVLATFIYKEPFKLEHGITFGCIWLALLLFSIDGIRTHQQSSNN 299
Query: 315 KS 316
K+
Sbjct: 300 KN 301
>gi|296386985|ref|ZP_06876484.1| putative permease [Pseudomonas aeruginosa PAb1]
Length = 298
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 72/293 (24%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ G + AY++WG+ PLY + LE++ +E+I R +WS ++++
Sbjct: 2 ATANLRRGYVLGLTAYVIWGLFPLYFKLLERIPAVEIIVQRAVWSALFGAVLLLFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +NP+ +L S ++A +W +++A+ S Y++ P+I+V LG +
Sbjct: 61 GWWRELRQNPQRFVVLAASGLLIASNWMTYVWAVNNGHMLEASLGYYINPLINVMLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL LQ +A L L + G P +SL +A+T+ Y RK PV + G
Sbjct: 121 LKERLRPLQWLAVALASLGVAQQVWQLGSLPWVSLVLALTFGFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + P+ L+++ G + F+ + +
Sbjct: 181 VETWLLLPLALVWLLLFADGPTSETTFWSTPEALWVVAAGPVTLVPLVCFNAAARHLPYA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+G ++Y AP L+++ ++ + + +D+ R F + +A+ VY + +
Sbjct: 241 TLGFLQYLAPTLVLLQAILLFGEHLDSSRLTAFAFIWLALAVYSFDAWRSLRR 293
>gi|256396775|ref|YP_003118339.1| RarD protein, DMT superfamily transporter [Catenulispora acidiphila
DSM 44928]
gi|256363001|gb|ACU76498.1| RarD protein, DMT superfamily transporter [Catenulispora acidiphila
DSM 44928]
Length = 332
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 77/309 (24%), Positives = 148/309 (47%), Gaps = 6/309 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++ +G F AY WG+ PLY LE E+++HR+ WSL V +
Sbjct: 1 MEDSGSAAERRLGVGFGIAAYGAWGLFPLYWPLLEPAGAGEILAHRMAWSLLAVLILLAL 60
Query: 74 FS-----GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
+++ ++ P+ V +L +A ++V+W +I+++ T+F YF+ P
Sbjct: 61 RRVPDGVARWGWVREIVRTPRKVALLAAAAVAISVNWFVYIWSVNHGHTVDTAFGYFINP 120
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKT 187
+++V G L+ERL LQ A + +++L++ + G P ++L +A ++ Y +K
Sbjct: 121 LVTVLFGVFLLRERLRRLQWAAVGIGAVAVLVLAVGYGKAPWIALVLACSFGTYGLLKKL 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
V ++E +E + +PA+ Y+VW G F +T LI G + F
Sbjct: 181 AAVPAAEAMAVESTLQFLPAIGYLVWLASQGTLDFAHHGAGNTGLLILAGPVTVVPLICF 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
R LS VG++++ AP+L + V + + + R F IV +A+V+ + + N
Sbjct: 241 GAAANRLPLSVVGLLQFLAPILQFLCGVLVQHESVPPARLAGFLIVWLALVLLTVDALRN 300
Query: 308 SGKNKTKKS 316
+ + + +
Sbjct: 301 ARRRPGRAA 309
>gi|15595682|ref|NP_249176.1| hypothetical protein PA0485 [Pseudomonas aeruginosa PAO1]
gi|107099471|ref|ZP_01363389.1| hypothetical protein PaerPA_01000483 [Pseudomonas aeruginosa PACS2]
gi|218889225|ref|YP_002438089.1| putative permease [Pseudomonas aeruginosa LESB58]
gi|254237288|ref|ZP_04930611.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254243580|ref|ZP_04936902.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|24212628|sp|Q9I633|Y485_PSEAE RecName: Full=Uncharacterized transporter PA0485
gi|9946348|gb|AAG03874.1|AE004486_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126169219|gb|EAZ54730.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196958|gb|EAZ61021.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769448|emb|CAW25208.1| putative permease [Pseudomonas aeruginosa LESB58]
Length = 298
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/293 (24%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ G + AY++WG+ PLY + LE++ +E+I R +WS ++ F
Sbjct: 2 ATANLRRGYVLGLTAYVIWGLFPLYFKLLERIPAVEIIVQRAVWSALF-GAVLLLFWKHP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +NP+ +L S ++A +W +++A+ S Y++ P+I+V LG +
Sbjct: 61 GWWRELRQNPQRFVVLAASGLLIASNWMTYVWAVNNGHMLEASLGYYINPLINVMLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL LQ +A L L + G P +SL +A+T+ Y RK PV + G
Sbjct: 121 LKERLRPLQWLAVALASLGVAQQVWQLGSLPWVSLVLALTFGFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++++ + P+ L+++ G + F+ + +
Sbjct: 181 VETWLLLPLALVWLLFFADGPTSETAFWSTPEALWVVAAGPVTLVPLVCFNAAARHLPYA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+G ++Y AP L+++ ++ + + +D+ R F + +A+ VY + +
Sbjct: 241 TLGFLQYLAPTLVLLQAILLFGEHLDSSRLTAFAFIWLALAVYSFDAWRSLRR 293
>gi|152988876|ref|YP_001345983.1| hypothetical protein PSPA7_0588 [Pseudomonas aeruginosa PA7]
gi|150964034|gb|ABR86059.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 298
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/293 (24%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ G + AY++WG+ PLY + LE++ +E+I R +WS ++++
Sbjct: 2 ATANLRRGYVLGLTAYVIWGLFPLYFKLLERIPAVEIIVQRAVWSALFGAVLLLFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +NP+ +L S ++A +W +++A+ S Y++ P+I+V LG +
Sbjct: 61 GWWRELRQNPRRFVVLAASGLLIASNWMTYVWAVNNGHMLEASLGYYINPLINVMLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL LQ +A L L + G P +SL +A+T+ Y RK PV + G
Sbjct: 121 LKERLRPLQWLAVALASLGVAQQVWQLGSLPWVSLVLALTFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + P+ L+++ G + F+ + +
Sbjct: 181 VETWLLLPLALVWLLLFADGPTSEAAFWSTPEALWVVAAGPVTLVPLVCFNAAARHLPYA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+G ++Y AP L+++ ++ + + +D+ R F + +A+ VY L + +
Sbjct: 241 TLGFLQYLAPTLVLLQAILLFGEHLDSSRLTAFAFIWLALAVYSLDAWRSLRR 293
>gi|256044373|ref|ZP_05447277.1| chloramphenicol-sensitive protein RARD [Brucella melitensis bv. 1
str. Rev.1]
Length = 306
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 158/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 135 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W + +HF G + + L+ G + ++ G K + +T+G+M+
Sbjct: 195 CIPALAYVAWLAATEQDHFVAGPVSNITLLLLAGPFTAIPLILYVGGAKLLRYATLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ G+N+ +
Sbjct: 255 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHGRNRAQ 305
>gi|83746078|ref|ZP_00943133.1| RarD [Ralstonia solanacearum UW551]
gi|207742426|ref|YP_002258818.1| predicted permeases protein [Ralstonia solanacearum IPO1609]
gi|83727261|gb|EAP74384.1| RarD [Ralstonia solanacearum UW551]
gi|206593816|emb|CAQ60743.1| predicted permeases protein [Ralstonia solanacearum IPO1609]
Length = 298
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 80/294 (27%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G +F AY +WG+ PLY + L+ V+ LE++SHRV+WSL + +
Sbjct: 1 MSAHARRGVVFALLAYTMWGLFPLYFKLLKSVTPLEILSHRVIWSLAVMVGVL-AVKRHW 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L + P+ V + S +LA++W +I+A+ S YF+ P++ V L +
Sbjct: 60 AWLWALRRAPRVVARHLASTAMLALNWCTYIWAVNHDHVIDASLGYFINPLVVVMLALLV 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL Q ++ L + +T +G P ++LA+A T+ Y RKT P+G+ EG
Sbjct: 120 LGERLRPGQWLSVALAAAGVAWLTWQAGHLPWIALALAATFGLYGLLRKTSPLGALEGLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L L Y+ W F L L+ G L + +F G +R LS
Sbjct: 180 LETLLLFPATLAYLGWLAAQQQNAFLAAPPGIRLLLVLAGPLTAVPLLLFGAGARRIPLS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G+++Y +P L ++ V++ +P + + ++ + VY + +
Sbjct: 240 LLGLLQYVSPTLQLLLGVWLYNEPFGGPKVFGYVLIWCGLAVYSAEGWMRLRRR 293
>gi|313111886|ref|ZP_07797676.1| hypothetical protein PA39016_004040004 [Pseudomonas aeruginosa
39016]
gi|310884178|gb|EFQ42772.1| hypothetical protein PA39016_004040004 [Pseudomonas aeruginosa
39016]
Length = 298
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 72/293 (24%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ G + AY++WG+ PLY + LE++ +E+I R +WS ++ +
Sbjct: 2 ATANLRRGYVLGLTAYVIWGLFPLYFKLLERIPAVEIIVQRAVWSALFGAVLLLLWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +NP+ +L S ++A +W +++A+ S Y++ P+I+V LG +
Sbjct: 61 GWWRELRQNPQRFVVLAASGLLIASNWMTYVWAVNNGHMLEASLGYYINPLINVMLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL LQ +A L L + G P +SL +A+T+ Y RK PV + G
Sbjct: 121 LKERLRPLQWLAVALASLGVAQQVWQLGSLPWVSLVLALTFGFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + P+ L+++ G + F+ + +
Sbjct: 181 VETWLLLPLALVWLLLFADGPTSETAFWSTPEALWVVAAGPVTLVPLVCFNAAARHLPYA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+G ++Y AP L+++ ++ + + +D+ R F + +A+ VY + +
Sbjct: 241 TLGFLQYLAPTLVLLQAILLFGEHLDSSRLTAFAFIWLALAVYSFDAWRSLRR 293
>gi|116054214|ref|YP_788658.1| hypothetical protein PA14_06320 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115589435|gb|ABJ15450.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
Length = 298
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 72/293 (24%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ G + AY++WG+ PLY + LE++ +E+I R +WS ++++
Sbjct: 2 ATANLRRGYVLGLTAYVIWGLFPLYFKLLERIPAVEIIVQRAVWSALFGAVLLLFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +NP+ +L S ++A +W +++A+ S Y++ P+I+V LG +
Sbjct: 61 GWWRELRQNPQRFVVLAASGLLIASNWMTYVWAVNNGHMLEASLGYYINPLINVMLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL LQ +A L L + G P +SL +A+T+ Y RK PV + G
Sbjct: 121 LKERLRPLQWLAVALASLGVAQQVWQLGSLPWVSLVLALTFGFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + P+ L+++ G + F+ + +
Sbjct: 181 VETWLLLPLALVWLLLFADGPTSETAFWSTPEALWVVAAGPVTLVPLVCFNAAARHLPYA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+G ++Y AP L+++ ++ + + +D+ R F + +A+ VY + +
Sbjct: 241 TLGFLQYLAPTLVLLQAILLFGEHLDSSRLTAFAFIWLALAVYSFDAWRSLRR 293
>gi|300742148|ref|ZP_07072169.1| protein RarD [Rothia dentocariosa M567]
gi|300381333|gb|EFJ77895.1| protein RarD [Rothia dentocariosa M567]
Length = 367
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/300 (23%), Positives = 130/300 (43%), Gaps = 4/300 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T G + +F Y +WG+ PLY + S LE++ RV++SL + F
Sbjct: 18 HAAQTRNGFICLFTTYAIWGMLPLYFYLMASSSALEIVLSRVIFSLAFCAVLLPIFRLTK 77
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ P+ +G+L ++ ++ +W ++Y+ S YF+ P++SV LG VF
Sbjct: 78 P-FNQAVRTPRTMGILTVASLLIGANWMIYVYSTTHGHTIDMSLGYFINPLVSVVLGVVF 136
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGSSEG 195
L ERL +Q IA + +++LIM++ G AR V
Sbjct: 137 LHERLRKVQWIAIGISTVAVLIMSVVYGQIPWLGLGVAFTFGTYGLLKARVGSSVHPVVS 196
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+E +L AL + W G F L G++ +FS +
Sbjct: 197 LSLETFILLPVALVVLWWMNTQGQLTLFSQGPGHFWLLASTGIVTVTPLVLFSAAARALP 256
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
LS +G+++Y P + ++F+L I + I ++ +A+V++ + V S ++ K
Sbjct: 257 LSVIGMVQYMGPTIQFFLALFVLHDRITPDKWIGLSLIWVAIVIFTVDAVRASRTSRPSK 316
>gi|56420120|ref|YP_147438.1| hypothetical protein GK1585 [Geobacillus kaustophilus HTA426]
gi|56379962|dbj|BAD75870.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 309
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 4/299 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGG 77
G L+ +Y+LWG+ PLY + LE LE+++HR++WS + +
Sbjct: 5 SEEKQGILYTAASYLLWGVLPLYWKLLEARPALEILAHRIVWSFVFMAILLAANGQLGAF 64
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + P + +A +++ +W +I+A+ TS Y++ P++SV LG++
Sbjct: 65 RRELRAMRRKPAKAWGIAAAAVLISANWFVYIWAVNHHHVVETSLGYYINPLVSVALGTI 124
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L+ERL+ Q A L + MT G P +++++A+T+ Y +K V SS G
Sbjct: 125 VLRERLSVGQWAAVFLAAAGVAAMTAEYGAFPWVAISLALTFGFYGLVKKLASVDSSIGL 184
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E + + Y++ L G G + F+ G KR +
Sbjct: 185 TLETMAVMPLSAVYLLCVYNETPALVKTAEWWQWALLAGAGPATAVPLLYFAKGAKRVSM 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+T+G ++Y +P + ++ VF+ +P F + A++++ + + K K
Sbjct: 245 TTLGFLQYISPTISLLLGVFLFGEPFTKAHFYAFSCIWTALILFSAVQIKQAPGRKKWK 303
>gi|89092837|ref|ZP_01165789.1| putative RarD [Oceanospirillum sp. MED92]
gi|89082862|gb|EAR62082.1| putative RarD [Oceanospirillum sp. MED92]
Length = 304
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 76/301 (25%), Positives = 147/301 (48%), Gaps = 2/301 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + S G + A+++WG+ P+Y + + + EVI+HR++WS + ++
Sbjct: 1 MNNTDLSQEHKKGVYYALAAFLMWGLVPVYFKSVAHIDEFEVIAHRIVWSCVFLALFLLV 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L LK P V L SA +++++W FI+A+ + T+ YF+ P+I++
Sbjct: 61 KRQLFEAL-ALLKRPAIVYGLGLSALVISINWLVFIWAVAQDRIVETTLGYFINPLINIL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGS 192
G F ER+ +Q A L + ++ + G P ++L +A +++ Y RK I V S
Sbjct: 120 FGMAFFGERMRPMQWAAVSLAAVGVVYQIVLLGELPWVALVLANSFALYGVLRKKITVDS 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G FIE L A+ Y++W F P L+ G++ S F+ G +
Sbjct: 180 ISGLFIETLWLLPFAVGYMLWLFSGHQLQFLSEGSPTVYLLLCAGIVTSLPLIAFAAGAR 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R L+ +G+++Y P + + +VF +P++ R F ++ IA+ ++ + ++ K +
Sbjct: 240 RLSLTLIGLLQYIGPSIAFLIAVFYYDEPMNMERLTTFILIWIALALFSIEGLLVQRKKR 299
Query: 313 T 313
Sbjct: 300 Q 300
>gi|196038505|ref|ZP_03105814.1| protein RarD [Bacillus cereus NVH0597-99]
gi|196030913|gb|EDX69511.1| protein RarD [Bacillus cereus NVH0597-99]
Length = 313
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 78/305 (25%), Positives = 157/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-- 71
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGV 58
Query: 72 -VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
F + + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMSSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + I F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTPTHMIAFFCIWVALFVFSVAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|262404933|ref|ZP_06081485.1| RarD protein [Vibrio sp. RC586]
gi|262348772|gb|EEY97913.1| RarD protein [Vibrio sp. RC586]
Length = 302
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 77/301 (25%), Positives = 144/301 (47%), Gaps = 2/301 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G L AY +WG+ P+Y + L +S E++SHRVLWS + +++F
Sbjct: 1 MTSEQNNAKKGILLAISAYTMWGVAPIYFKALGTISTPEILSHRVLWSFV-LLAVLIHFG 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ ++ P+ +L+ +A ++ +W FI+++ + + S Y++ P+++V LG
Sbjct: 60 HRWRSVVGVVQTPRKFWLLLVTALLVGGNWLIFIWSINSNKMLDASLGYYINPLLNVLLG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ A L + + I + + +P++++A+A T+ Y RK I V +
Sbjct: 120 MLFLGERLRKLQWFAVTLAAIGVGIQLVVFGSVPIVAIALATTFGFYGLLRKKIQVDAQT 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E + A Y+ W S + L L LI G++ + F+
Sbjct: 180 GLFLETLFMLPAAAIYLFWFADSTTSNLLLNGWQLNLLLISAGVVTTLPLLCFTGAAAHL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G +Y P LM + +V + + + + I F + A+ V+ + +
Sbjct: 240 KLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWGALAVFSFDGLTAGRAARRA 299
Query: 315 K 315
+
Sbjct: 300 Q 300
>gi|304398158|ref|ZP_07380033.1| RarD protein, DMT superfamily transporter [Pantoea sp. aB]
gi|304354444|gb|EFM18816.1| RarD protein, DMT superfamily transporter [Pantoea sp. aB]
Length = 301
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 86/296 (29%), Positives = 150/296 (50%), Gaps = 2/296 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P Y + ++QV E+++HRV+WS + ++ S
Sbjct: 3 TQQTRQGVGFALGAYFIWGIAPAYFKLVKQVPATEIMTHRVIWSALFMLL-LITLSRSWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L+ P+ V ML +A + +W FI+A+ + S YF+ P+I+V G +FL
Sbjct: 62 GVRSVLRQPRKVLMLALTAVTIGGNWLLFIWAVNNQHMLEASLGYFINPLINVVFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ER LQ +A LL + +L+ G P+++L +A++++ Y RK I V + G I
Sbjct: 122 RERFRRLQWLAVLLAAVGVLVQLWQFGSLPIIALGLALSFALYGLLRKKIQVDAQSGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + +F+ R +LST
Sbjct: 182 ETLWLFPLAAIYLFGFADSATSHLSANPLSLNLKLIAAGIVTTIPLMLFAAACSRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
VG +Y P LM V +V + I + + F + +A++V++ V S +++++
Sbjct: 242 VGFFQYLGPTLMFVLAVVFYGETITPDKLVTFAFIWLALLVFVCDAVAFSFRSRSR 297
>gi|148545639|ref|YP_001265741.1| transporter DMT superfamily protein [Pseudomonas putida F1]
gi|148509697|gb|ABQ76557.1| RarD protein, DMT superfamily transporter [Pseudomonas putida F1]
Length = 295
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ PLY + ++ V +E+I HRVLWS ++ +
Sbjct: 2 HAANPRRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ +G+L S ++A +W +++++ + S Y++ P+I+V LG +
Sbjct: 61 GWWRELRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A + + + +P +SL +A+++ Y RK PV + G
Sbjct: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + + + L+ + G + F+ + +
Sbjct: 181 VETWMLVPLALGWLLLHPAAMSAQGAFYTSSEALWQMAAGPVTLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + F + + +Y + +N K
Sbjct: 241 TLGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNLRKR 294
>gi|239995579|ref|ZP_04716103.1| Conserved membrane protein RarD [Alteromonas macleodii ATCC 27126]
Length = 304
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 80/303 (26%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+SK+ ++ G + AY +WG+ P+Y + L + E++ HRV+WS+ + I
Sbjct: 1 MSKQASAAQV--GVICAIAAYSMWGVAPVYFKQLMVLPAAEILMHRVIWSVVLLVGLIAA 58
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ +N + + +L + +L +W FI+A+ S Y++ P+I+VF
Sbjct: 59 LKQ-WPKVGAAFRNKRVMQILFVAGLLLGANWLLFIWAINNDHILDASLGYYINPLINVF 117
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL +LQ +A L ++ + I+ G P ++L +A ++S Y RK + V S
Sbjct: 118 LGRLFLGERLRNLQRVAVGLAVIGVAILIFSYGHVPWIALVLAGSFSVYGLLRKQVAVDS 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G FIE +L+ A+ Y V+ G F + ++ G++ + F+ +
Sbjct: 178 LPGLFIETLMLSPFAIIYWVFFGSEYSNLFN-NDATLNTLILAAGIVTTAPLLCFTAAAR 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R ST+G +Y P LM + +V++ +P++ R + FG V A++++ +++N +
Sbjct: 237 RIMYSTLGFFQYIGPTLMFILAVYLYGEPLEESRLVTFGFVWFALILFSADSLVNYRSQR 296
Query: 313 TKK 315
+
Sbjct: 297 KAR 299
>gi|262040872|ref|ZP_06014098.1| DMT superfamily drug/metabolite transporter RarD [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259041761|gb|EEW42806.1| DMT superfamily drug/metabolite transporter RarD [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 297
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T +G + AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRLGIILALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALISVSRQWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK P+ + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKKLLKTPRKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A +L +L+ G P++ L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRLQWLAVILAFCGVLVQLWTFGSLPIIGLGLAFSFAFYGLVRKKIAVDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A ++ S H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIWLFGITDSPTSHMGENPWSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + FG + +A+ V++L + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGKDKMVTFGFIWVALAVFILDALYTQRRLRR 296
>gi|149181102|ref|ZP_01859602.1| rarD protein [Bacillus sp. SG-1]
gi|148851189|gb|EDL65339.1| rarD protein [Bacillus sp. SG-1]
Length = 311
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 73/290 (25%), Positives = 144/290 (49%), Gaps = 4/290 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLLK 82
G L+ +Y LWG+ P+Y + L V E++++R+ WS + ++ ++K
Sbjct: 14 GILYTAFSYFLWGLLPIYWKLLNHVPADEILANRIFWSFWFMIVVLIVIKKFPAFWDMIK 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ K + L ++ +++ +W +I+A+ T Q S Y++ P++SV LG L+E+
Sbjct: 74 GMMNTKKKLAALATASLLVSANWFIYIWAVNTDQMVEASLGYYINPLVSVLLGVFILREK 133
Query: 143 LNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ Q+++ +L + ++++T G P +++ +AV++ Y A+K I V S G +E
Sbjct: 134 MTKAQVVSFILAAIGVIVLTASYGRFPWIAIGLAVSFGLYGLAKKLIKVDSDIGLTLETM 193
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A AL Y+++ G F + L LIG G + + F+ G +R L VG
Sbjct: 194 TTAPFALIYLIYLSSKGDISLFQFSAGTDLLLIGAGAVTAVPLLYFAKGAQRIPLYMVGF 253
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y AP L ++ VF+ +P I F + A+ ++ + + +
Sbjct: 254 LQYIAPTLTLILGVFLYGEPFTQTHLIAFTFIWSALTIFSVSRMKRVKRK 303
>gi|62289642|ref|YP_221435.1| RarD protein [Brucella abortus bv. 1 str. 9-941]
gi|82699570|ref|YP_414144.1| hypothetical protein BAB1_0702 [Brucella melitensis biovar Abortus
2308]
gi|189023892|ref|YP_001934660.1| RarD protein [Brucella abortus S19]
gi|237815133|ref|ZP_04594131.1| RarD protein [Brucella abortus str. 2308 A]
gi|254688952|ref|ZP_05152206.1| RarD protein [Brucella abortus bv. 6 str. 870]
gi|254697086|ref|ZP_05158914.1| RarD protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254729982|ref|ZP_05188560.1| RarD protein [Brucella abortus bv. 4 str. 292]
gi|256257200|ref|ZP_05462736.1| RarD protein [Brucella abortus bv. 9 str. C68]
gi|260545606|ref|ZP_05821347.1| RarD protein [Brucella abortus NCTC 8038]
gi|260754441|ref|ZP_05866789.1| transporter DMT superfamily protein [Brucella abortus bv. 6 str.
870]
gi|260761487|ref|ZP_05873830.1| transporter DMT superfamily protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883470|ref|ZP_05895084.1| transporter DMT superfamily protein [Brucella abortus bv. 9 str.
C68]
gi|297248050|ref|ZP_06931768.1| RarD protein [Brucella abortus bv. 5 str. B3196]
gi|62195774|gb|AAX74074.1| RarD, RarD protein [Brucella abortus bv. 1 str. 9-941]
gi|82615671|emb|CAJ10658.1| Protein of unknown function DUF6:RarD protein [Brucella melitensis
biovar Abortus 2308]
gi|189019464|gb|ACD72186.1| RarD protein [Brucella abortus S19]
gi|237789970|gb|EEP64180.1| RarD protein [Brucella abortus str. 2308 A]
gi|260097013|gb|EEW80888.1| RarD protein [Brucella abortus NCTC 8038]
gi|260671919|gb|EEX58740.1| transporter DMT superfamily protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674549|gb|EEX61370.1| transporter DMT superfamily protein [Brucella abortus bv. 6 str.
870]
gi|260872998|gb|EEX80067.1| transporter DMT superfamily protein [Brucella abortus bv. 9 str.
C68]
gi|297175219|gb|EFH34566.1| RarD protein [Brucella abortus bv. 5 str. B3196]
Length = 306
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 135 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + ++ G K + +T+G+M+
Sbjct: 195 CIPALAYVAWLAATGQDHFVTGPVSNITLLLLAGPFTAIPLILYVGGAKLLRYATLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ G+N+ +
Sbjct: 255 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHGRNRAQ 305
>gi|329997486|ref|ZP_08302788.1| protein RarD [Klebsiella sp. MS 92-3]
gi|328539054|gb|EGF65093.1| protein RarD [Klebsiella sp. MS 92-3]
Length = 297
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T +G + AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRLGIILALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALISVSRQWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK P+ + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKKLLKTPRKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A LL +L+ G P++ L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRLQWLAVLLAFCGVLVQLWTFGSLPIIGLGLAFSFAFYGLVRKKIAVDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A ++ S H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIWLFGITDSPTSHMGENPWSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + FG + +A+ V+++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGKDKMVTFGFIWVALAVFIVDALYTQRRLRR 296
>gi|225852200|ref|YP_002732433.1| RarD protein [Brucella melitensis ATCC 23457]
gi|256113216|ref|ZP_05454084.1| RarD protein [Brucella melitensis bv. 3 str. Ether]
gi|265994627|ref|ZP_06107184.1| transporter DMT superfamily protein [Brucella melitensis bv. 3 str.
Ether]
gi|225640565|gb|ACO00479.1| RarD protein [Brucella melitensis ATCC 23457]
gi|262765740|gb|EEZ11529.1| transporter DMT superfamily protein [Brucella melitensis bv. 3 str.
Ether]
gi|326408699|gb|ADZ65764.1| RarD protein [Brucella melitensis M28]
gi|326538423|gb|ADZ86638.1| RarD protein [Brucella melitensis M5-90]
Length = 306
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 135 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + ++ G K + +T+G+M+
Sbjct: 195 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYVGGAKLLRYATLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ G+N+ +
Sbjct: 255 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHGRNRAQ 305
>gi|152972803|ref|YP_001337949.1| chloramphenicol resistance [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206580758|ref|YP_002241122.1| RarD protein [Klebsiella pneumoniae 342]
gi|238892415|ref|YP_002917149.1| chloramphenicol resistance [Klebsiella pneumoniae NTUH-K2044]
gi|288937762|ref|YP_003441821.1| RarD protein, DMT superfamily transporter [Klebsiella variicola
At-22]
gi|290513157|ref|ZP_06552519.1| RarD protein [Klebsiella sp. 1_1_55]
gi|150957652|gb|ABR79682.1| chloramphenicol resistance [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206569816|gb|ACI11592.1| RarD protein [Klebsiella pneumoniae 342]
gi|238544731|dbj|BAH61082.1| chloramphenicol resistance [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|288892471|gb|ADC60789.1| RarD protein, DMT superfamily transporter [Klebsiella variicola
At-22]
gi|289774368|gb|EFD82374.1| RarD protein [Klebsiella sp. 1_1_55]
Length = 297
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T +G + AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRLGIILALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALISVSRQWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK P+ + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKKLLKTPRKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER LQ +A +L +L+ G P++ L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRLQWLAVILAFCGVLVQLWTFGSLPIIGLGLAFSFAFYGLVRKKIAVDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A ++ S H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIWLFGITDSPTSHMGENPWSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + FG + +A+ V+++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGKDKMVTFGFIWVALAVFIVDALYTQRRLRR 296
>gi|238062230|ref|ZP_04606939.1| DMT superfamily transporter [Micromonospora sp. ATCC 39149]
gi|237884041|gb|EEP72869.1| DMT superfamily transporter [Micromonospora sp. ATCC 39149]
Length = 308
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 86/286 (30%), Positives = 154/286 (53%), Gaps = 2/286 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P +G L+ AY+LWG PLY + L LE+++HR++WS+ V +
Sbjct: 2 TPLRLGYLYGIGAYLLWGFFPLYLRLLRPTGPLEILAHRIVWSVLFVALLLAALRNV-GF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + P+A+ + +A ++AV+WG +IY + + + T+ YF+TP++SV LG L+
Sbjct: 61 LRTLARRPRALAGIAVAAALIAVNWGTYIYGVNSERVVETALGYFITPLVSVLLGVTVLR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q +A + ++ ++ + G P L+LA+AV+++ Y +K + + +EG F E
Sbjct: 121 ERLRRGQWVALGIGTAAVAVLAVDYGRLPWLALALAVSFAGYGLVKKRLGLPPAEGLFAE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LA+PAL Y+ W G +GG F + T L+ G + +F+ R L+ +
Sbjct: 181 SAALALPALGYLGWLGATGGLTFGHVSAGHTALLVLAGAATAIPLLLFAGAANRLPLTAL 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
G+++Y AP+L + V I +P+ R F +V +A++ + +
Sbjct: 241 GMLQYLAPILQLGCGVLIFHEPMPPARLAGFALVWLALLAFTTDAL 286
>gi|322834923|ref|YP_004214950.1| RarD protein, DMT superfamily transporter [Rahnella sp. Y9602]
gi|321170124|gb|ADW75823.1| RarD protein, DMT superfamily transporter [Rahnella sp. Y9602]
Length = 304
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 2/298 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G +F F AY++WGI P Y + ++QV E+++HRV+WS + ++ S
Sbjct: 3 AHRTRQGVIFAFIAYLIWGIAPAYFKLIKQVPADEILTHRVIWSFFFM-LVLLSVSRSWG 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ PK +GML+ +A ++ +W FI+A+ S YF+ P+++V LG +FL
Sbjct: 62 DVRRVFAQPKKIGMLLITALLVGGNWLIFIWAINHNHILEASLGYFINPLVNVVLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ER LQ A L +L+ +P++++ +++T++ Y RK I V S G I
Sbjct: 122 RERFRSLQWFAVALAFAGVLVQVWVFGSVPVIAIGLSLTFAFYGLLRKKIGVDSQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S + L L+ G++ + F+ R KLST
Sbjct: 182 ETLWLLPVAGIYLFFIAHSQTSNLAANPWSLDLLLMAAGIITTIPLLFFTAAAARLKLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+G +Y P LM + +V + ++T + I FG + + ++ ++ + G+ + +S
Sbjct: 242 LGFFQYLGPTLMFLLAVVFYGETVNTSQLITFGFIWVGLLCFIGDALYTQGRLRRGRS 299
>gi|186477164|ref|YP_001858634.1| transporter DMT superfamily protein [Burkholderia phymatum STM815]
gi|184193623|gb|ACC71588.1| RarD protein, DMT superfamily transporter [Burkholderia phymatum
STM815]
Length = 294
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 77/290 (26%), Positives = 148/290 (51%), Gaps = 2/290 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + A+ LWG+ P+Y + L Q+S +E+++HR++WS+ +F ++ L L
Sbjct: 4 GVAYALLAFTLWGLFPVYFKSLHQISPVEMLAHRMVWSMLFLF-IVLTVRQQWRWLAPVL 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + SA +L+ +WG +I+A+ S YFV P+I+V G FL ERL
Sbjct: 63 RDRNLLTRFAASALLLSTNWGIYIWAVNAGHIVEASLGYFVNPLINVLFGLAFLGERLRR 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+Q ++ + +L +T +G P A+A +++ Y RKT +G+ EG +E +L
Sbjct: 123 VQWVSVAVATCGVLWLTWQNGHPPWISLALAFSFAGYGLLRKTAQLGALEGLTLETVLLF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y+ + G F ++ + L G + + +F+ G +R LS +G+++Y
Sbjct: 183 PVAVLYLFFASSHGQSGFGAASVGVKVLLALAGPITAVPLLLFAAGARRIPLSMLGLIQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P L ++ V I ++P + + +G + IA+ +Y L + + + +
Sbjct: 243 VTPSLQLLIGVLIYREPFGQTQLVGYGAIWIALALYSLDGLWRARFARAQ 292
>gi|218898650|ref|YP_002447061.1| rarD protein [Bacillus cereus G9842]
gi|228909365|ref|ZP_04073190.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis IBL
200]
gi|228940642|ref|ZP_04103207.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973561|ref|ZP_04134144.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980119|ref|ZP_04140434.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
Bt407]
gi|229151753|ref|ZP_04279953.1| chloramphenicol-sensitive RarD protein [Bacillus cereus m1550]
gi|218541685|gb|ACK94079.1| rarD protein [Bacillus cereus G9842]
gi|228631680|gb|EEK88309.1| chloramphenicol-sensitive RarD protein [Bacillus cereus m1550]
gi|228779601|gb|EEM27853.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
Bt407]
gi|228786148|gb|EEM34144.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819021|gb|EEM65081.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228850142|gb|EEM94971.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis IBL
200]
gi|326941274|gb|AEA17170.1| chloramphenicol-sensitive protein rarD [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 313
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 155/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G L+ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGILYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLLVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVVILTVRFGSIPWVSLSLAFSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGAHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|228922266|ref|ZP_04085573.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228837321|gb|EEM82655.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 313
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 154/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G L+ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGILYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLLVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVVILTVRFGSIPWVSLSLAFSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGAHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTATHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|288573168|ref|ZP_06391525.1| RarD protein, DMT superfamily transporter [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568909|gb|EFC90466.1| RarD protein, DMT superfamily transporter [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 298
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 80/295 (27%), Positives = 144/295 (48%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + A +WG+ P+Y + + V E++SHR++WSL + G
Sbjct: 2 NKAKRGFVAAAAAMSIWGLLPVYWKQMSGVPAYEILSHRIIWSLVAATMFLSI-RGSWGK 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L++ K + ++ S ++ +W +I+A+ + S Y++ P+I+V G V K
Sbjct: 61 VSLALRDRKVISLMSLSGAVIGCNWLLYIWAVNSGHVLQCSLGYYINPLINVLTGYVVFK 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+RL +Q A L +L + G P ++L +A ++S Y RK V G F+E
Sbjct: 121 DRLRPVQWAAIALAGAGVLYQIVLYGKVPWIALGLACSFSLYALIRKLADVDPLPGLFLE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VLA PA+ ++ W G GG F I +LFLIG GL+ S F G + L TV
Sbjct: 181 TAVLAFPAVAFLAWTGIDGGGAFMTEGIRVSLFLIGTGLITSIPLLWFVQGARDISLVTV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+++Y +P L + ++ + + + + F + +A+ +Y + +V + + K +
Sbjct: 241 GLLQYISPTLQFMLGYWVYGESFSSAQMVTFTSIWVALTIYTVDSVNDVIRKKRR 295
>gi|241662095|ref|YP_002980455.1| RarD protein, DMT superfamily transporter [Ralstonia pickettii 12D]
gi|240864122|gb|ACS61783.1| RarD protein, DMT superfamily transporter [Ralstonia pickettii 12D]
Length = 298
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 82/294 (27%), Positives = 145/294 (49%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G +F F AY +WG+ PLY + L+ VS +E++SHRV+WSL + ++
Sbjct: 1 MSGSNRNGVIFAFLAYTMWGLFPLYFKLLKAVSPIEILSHRVIWSLAVMVVILLV-KRHG 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L K P+ VG S ++LA +W +I+A+ S YF+ P++ V L ++
Sbjct: 60 AWLWALRKQPRVVGRYAASTSLLAANWLTYIWAVNHDHVLEASLGYFINPLVVVMLAALV 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL +Q ++ L + +T +G P ++LA+A ++ Y RKT P+G+ EG
Sbjct: 120 LGERLRPVQWVSVALAAAGVAWLTWQAGTLPWIALALAFSFGLYGLLRKTSPLGALEGLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL Y+ W F + L G L + +F G +R LS
Sbjct: 180 LETLLLFPLALAYLGWLASQHQNAFLAASPGTQWLLALAGPLTALPLLLFGAGARRIPLS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G+++Y +P L ++ V++ +P + + ++ + VY + + +
Sbjct: 240 LLGLLQYVSPTLQLLLGVWLYNEPFAGPKVAGYVLIWAGLAVYSAESWMRLRRR 293
>gi|73543077|ref|YP_297597.1| RarD protein [Ralstonia eutropha JMP134]
gi|72120490|gb|AAZ62753.1| RarD protein [Ralstonia eutropha JMP134]
Length = 301
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 74/290 (25%), Positives = 148/290 (51%), Gaps = 2/290 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L+ AYI+WG+ PLY + L ++ E++ HR++WSL + I+ + L
Sbjct: 3 LGILYALLAYIIWGLLPLYIKSLPGIAPAEILLHRMVWSLAFL-AIILASRRQWAWLGKV 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + SA +L +W +I+A+ + S YF+ P+ SV LG +FL ERL
Sbjct: 62 VTDRRLLVSFAASAALLCGNWFLYIWAVSANRVVDASLGYFINPLFSVLLGVMFLHERLR 121
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q ++ ++ + +T+ SG P ++LA+A T+ Y RKT +G+ EG +E +L
Sbjct: 122 PGQWLSIVVAAAGVAWLTVASGQLPWIALALAATFGGYGLLRKTGALGALEGLSLETLLL 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + +G + F L+ G + + F+ G +R LS +G+++
Sbjct: 182 FPIAAAALGYLFATGQDGFRHAAPGTQCLLLMAGPVTAVPLLFFAAGARRIPLSLLGLLQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
YT P L ++ V++ +P + + + ++ +++ +Y + + + ++
Sbjct: 242 YTGPTLQLLLGVWLWHEPFPPQKQLGYALIWVSLALYAAEGLWITARQRS 291
>gi|161505537|ref|YP_001572649.1| hypothetical protein SARI_03702 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866884|gb|ABX23507.1| hypothetical protein SARI_03702 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 298
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSISRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + FG + +A+ ++++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYDEHPGADKMVTFGFIWVALAIFVMDALYTQRRTRK 296
>gi|254693434|ref|ZP_05155262.1| RarD protein [Brucella abortus bv. 3 str. Tulya]
gi|261213687|ref|ZP_05927968.1| transporter DMT superfamily protein [Brucella abortus bv. 3 str.
Tulya]
gi|260915294|gb|EEX82155.1| transporter DMT superfamily protein [Brucella abortus bv. 3 str.
Tulya]
Length = 306
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 159/291 (54%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L V +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 -RQPRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLT 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L
Sbjct: 135 KTQYVAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV W +G +HF G + + L+ G + ++ G K + +T+G+M+
Sbjct: 195 CIPALAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYVGGAKLLRYATLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P T + F ++ + +Y ++ G+N+ +
Sbjct: 255 YMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHGRNRAQ 305
>gi|229197668|ref|ZP_04324388.1| chloramphenicol-sensitive RarD protein [Bacillus cereus m1293]
gi|228585745|gb|EEK43843.1| chloramphenicol-sensitive RarD protein [Bacillus cereus m1293]
Length = 313
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 157/301 (52%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G ++ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKMLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMSSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+VV+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALVVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|37528449|ref|NP_931794.1| RarD protein [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36787887|emb|CAE17004.1| RarD protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 296
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 82/295 (27%), Positives = 144/295 (48%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G L+ F A +WGI P+Y + ++QV E+++HR++WS + + S
Sbjct: 3 KPQTTKGVLYAFGACFIWGIAPIYFKHIQQVPADEILTHRIIWSFFFMLLLLTLTR-HWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ PK V +L +AT++A +W +I+A+ S YF++P+++V G +FL
Sbjct: 62 QVVKVFHQPKKVLLLAVTATVVACNWLIYIWAVNHGHMLEASLGYFISPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q A +L +LI G IP++ L++AVT++ Y RK + V + G I
Sbjct: 122 SERFRRMQWAAVILAFTGVLIQLWQFGSIPVIGLSLAVTFALYALLRKKMNVDAQTGMTI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S + L+LI G++ + +++ +LST
Sbjct: 182 ETLWLLPVAAIYLFGFANSPTSDLTANPMTLNLWLIAAGIITTVPLLLYTEAAAHLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + + + + I R I FG + A+V++ L V +++
Sbjct: 242 LGFFQYVGPTLMFLLATLVYGEQIGIDRLITFGFIWAALVLFTLDAVYTQRRSQR 296
>gi|88861124|ref|ZP_01135758.1| hypothetical protein PTD2_17047 [Pseudoalteromonas tunicata D2]
gi|88816846|gb|EAR26667.1| hypothetical protein PTD2_17047 [Pseudoalteromonas tunicata D2]
Length = 309
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 2/298 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G LF A+++WG+ P+Y + L+ V+ +E++ HRV+WS + +V
Sbjct: 2 SVQTEQKQGMLFAIAAFLMWGLAPIYFKSLDTVAAMEILVHRVVWSFLFLILIVVAIKQ- 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ LK PK + MLV SA++L +WG FI+A+ S Y++ P+++V LG +
Sbjct: 61 WHKIEHVLKQPKLLAMLVVSASLLGFNWGLFIWAVNNNHMLDASLGYYINPLLNVLLGFL 120
Query: 138 FLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL Q +A L + ++I M P+++ A+A T++ Y RK + V S G
Sbjct: 121 FLGERLRRWQGVAVALAMTGVIIQMISFGSFPVIAFALASTFAIYGLIRKKLAVDSLPGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E +L AL Y S L + L+ G++ + F+ KR +
Sbjct: 181 LLESLILLPAALIYWFAFMESSSADLTLNSWQLNTLLVSAGVVTTLPLLCFTAAAKRLQY 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+T+G +Y P LM + +V + R I F + A+ ++ + S K K +
Sbjct: 241 TTLGFFQYLGPSLMFLLAVSFYGEVFGVDRIITFACIWGALALFSWDSYRFSQKTKKR 298
>gi|167622374|ref|YP_001672668.1| transporter DMT superfamily protein [Shewanella halifaxensis
HAW-EB4]
gi|167352396|gb|ABZ75009.1| RarD protein, DMT superfamily transporter [Shewanella halifaxensis
HAW-EB4]
Length = 295
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ CAY LWG LY + L++V E++ HRVLWS V I F G
Sbjct: 2 QETEYRKGIIYAICAYTLWGFAALYFKLLDKVPAAEILLHRVLWSFVFVTILIALFGG-F 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L++ LK PK + +L ++ ++A +W FI+A+ S YF+ P+++V L +F
Sbjct: 61 ARLRNLLKQPKQLAVLCVTSVLIAGNWLLFIWAVNNDHMLDASLGYFINPLVNVSLAMIF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ A L ++I + G IPL+SL +A +++ Y RK + V + G
Sbjct: 121 LGERLRKLQWAAVALAATGVMIQLISFGSIPLVSLGLACSFAFYGLLRKKVNVDAKTGLL 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL Y+V N H ++ L L+ G++ + F+ R S
Sbjct: 181 VETAILMPIALIYLVTNMGDSLTHLLTNDLNLNLLLVAAGIVTTIPLLCFASAAVRIPFS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+G +Y P +M V ++ + +P D + I F + A++++ +
Sbjct: 241 MLGFFQYIGPSIMFVLAIALFNEPFDAEKGITFAFIWAALLLFTVDMFYKRK 292
>gi|34495759|ref|NP_899974.1| rarD protein, chloamphenicol sensitive [Chromobacterium violaceum
ATCC 12472]
gi|34101615|gb|AAQ57983.1| rarD protein, chloamphenicol sensitive [Chromobacterium violaceum
ATCC 12472]
Length = 303
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 151/292 (51%), Gaps = 2/292 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L+ A+I WG+ PLY + L +V L+++ HR++WS V + L+
Sbjct: 11 RGVLYTVGAFICWGLFPLYWKPLHEVPALQILCHRIVWSALFVALVLTALRQ-WGDLRAA 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L+ P+ +G+ S+T+L+++W +I+A+ S YF+ P+++V LG + L ERL+
Sbjct: 70 LRQPRQLGIFALSSTVLSLNWLIYIWAVNAGHVVEASLGYFINPLVNVLLGRLVLSERLS 129
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A L + +T +G P ++L++A T+ Y RK P+ S G +E ++
Sbjct: 130 RPQKLAVGLAAAGVAWLTFSAGALPWIALSLAATFGLYGLLRKMAPLPSLPGLALETFLM 189
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ AL ++W ++G F + LIG G++ + +F+ G +R KL+TVG+++
Sbjct: 190 SPLALAALLWFEWNGQGAFGHADALRNGLLIGAGVVTAVPLLMFAAGARRLKLATVGLIQ 249
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y P + + V + +P R + F ++ A+ +Y + + ++
Sbjct: 250 YIGPSIQLALGVMLYGEPFGADRALGFALIWSALALYSAVGARELWRGRRRQ 301
>gi|104784039|ref|YP_610537.1| RarD protein [Pseudomonas entomophila L48]
gi|95113026|emb|CAK17754.1| RarD protein [Pseudomonas entomophila L48]
Length = 295
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 72/294 (24%), Positives = 142/294 (48%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L AYI+WG+ PLY + ++ V +E+I HRVLWS ++ +
Sbjct: 2 HAANPRRGYLLGLGAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ + +L S ++A +W +++A+ + S Y++ P+I+V LG +
Sbjct: 61 GWWRELRDNPRRLAILALSGALIAGNWLTYVWAVNNGRMLEASLGYYINPLINVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L L ++ +P +SLA+A+++ Y RK PV + G
Sbjct: 121 LGERLRRLQWLAVGLAALGVVQQVWQVGSLPWVSLALALSFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L A+ +++ + + + + ++LI G + F+ + +
Sbjct: 181 VETWMLVPIAIGWLLLHPAASSASPEFFSSSEAMWLIAAGPVTLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + F + + VY + I+ K
Sbjct: 241 TLGFLQYLAPTLVLLQAVLLFDEHLTASNLLAFACIWAGLAVYSVDAWISLRKR 294
>gi|30021661|ref|NP_833292.1| chloramphenicol-sensitive protein rarD [Bacillus cereus ATCC 14579]
gi|218233693|ref|YP_002368371.1| rarD protein [Bacillus cereus B4264]
gi|228959744|ref|ZP_04121419.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229047238|ref|ZP_04192838.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH676]
gi|229110980|ref|ZP_04240540.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock1-15]
gi|229128830|ref|ZP_04257806.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BDRD-Cer4]
gi|229146125|ref|ZP_04274501.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BDRD-ST24]
gi|296504065|ref|YP_003665765.1| chloramphenicol-sensitive protein RarD [Bacillus thuringiensis
BMB171]
gi|29897216|gb|AAP10493.1| Chloramphenicol-sensitive protein rarD [Bacillus cereus ATCC 14579]
gi|218161650|gb|ACK61642.1| rarD protein [Bacillus cereus B4264]
gi|228637336|gb|EEK93790.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BDRD-ST24]
gi|228654535|gb|EEL10397.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BDRD-Cer4]
gi|228672464|gb|EEL27748.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock1-15]
gi|228724105|gb|EEL75450.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH676]
gi|228799874|gb|EEM46816.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296325117|gb|ADH08045.1| chloramphenicol-sensitive protein rarD [Bacillus thuringiensis
BMB171]
Length = 313
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 155/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G L+ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGILYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLLVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGSIPWVSLSLAFSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPLAIIYLVMTGAHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|229191645|ref|ZP_04318624.1| chloramphenicol-sensitive RarD protein [Bacillus cereus ATCC 10876]
gi|228591807|gb|EEK49647.1| chloramphenicol-sensitive RarD protein [Bacillus cereus ATCC 10876]
Length = 313
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 155/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G L+ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGILYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLLVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGSIPWVSLSLAFSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|239980113|ref|ZP_04702637.1| integral membrane protein [Streptomyces albus J1074]
gi|291451968|ref|ZP_06591358.1| integral membrane protein [Streptomyces albus J1074]
gi|291354917|gb|EFE81819.1| integral membrane protein [Streptomyces albus J1074]
Length = 361
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 72/285 (25%), Positives = 140/285 (49%), Gaps = 2/285 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+L + G AY +WG+ PL+ L +E+++HR+ WSL V ++ S
Sbjct: 21 ALSSRAGLFNGIAAYSMWGLVPLFWPLLMPAGAMEILAHRMTWSLVVVGVVLLVLRR-WS 79
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ P+ + ++ +A ++ V+WG +I+++ S YF+ P++++ +G + L
Sbjct: 80 WAGELIRQPRRLALVTVAAAVITVNWGLYIWSVNNNHVVEASLGYFINPLVTIAMGVLLL 139
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KERL +Q A + ++L++ G P +SLA+A +++ Y +K + +G E
Sbjct: 140 KERLRPVQWAAVGTGLAAVLVLAFGYGQPPWISLALAFSFATYGLVKKKVNLGGVESLAA 199
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + +PAL +++W G G F + L G++ + F R LST
Sbjct: 200 ETAIQFLPALGFLLWLGARGESTFTAEGGGHAVLLALTGVVTAVPLVCFGAAAIRVPLST 259
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+G+++Y AP+ V K+ + R FG+V +A+ +
Sbjct: 260 LGLLQYLAPVFQFALGVLYFKEAMPPERWAGFGLVWLALTLLTWD 304
>gi|330505326|ref|YP_004382195.1| transporter DMT superfamily protein [Pseudomonas mendocina NK-01]
gi|328919612|gb|AEB60443.1| transporter DMT superfamily protein [Pseudomonas mendocina NK-01]
Length = 297
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ G + AYI+WG+ P+Y + ++ + LE+I HR +WS ++
Sbjct: 2 ATANPQRGYILGLTAYIIWGLFPIYFKAVQHIPSLEIIVHRAVWSALF-GAILLMLWKHP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ ++PK + +L ++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRELREHPKRLAVLAGCGLLIASNWLVYVWAVNNERMLEASLGYYINPLVNVLLGLLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L + + +P +SL +A+T+ Y RK PV + G
Sbjct: 121 LGERLRRLQWVAVGLAAIGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ + + + L+L G + F+ + +
Sbjct: 181 VETWLLLPVALAWLALHPAAMSSQPEFWSSSQWLWLAAAGPITLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ ++F+ + D + + F + + VY L ++ K
Sbjct: 241 TLGFLQYIAPTLVMLQAIFLFGEHFDPAKLVAFAFIWAGLAVYSLDIWLSLRKR 294
>gi|284034148|ref|YP_003384079.1| RarD protein, DMT superfamily transporter [Kribbella flavida DSM
17836]
gi|283813441|gb|ADB35280.1| RarD protein, DMT superfamily transporter [Kribbella flavida DSM
17836]
Length = 302
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 71/290 (24%), Positives = 143/290 (49%), Gaps = 2/290 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + AY+LWG+ PLY + L++ +E+++HR++W+L + +V +
Sbjct: 3 EQRRGFIQGLSAYLLWGLFPLYWRLLDESGAIELLAHRIVWALVTIALLVVVLRR-FGQV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L P+ L+ + +++V+WG +I+ + + TS YF+TP+ +V LG L E
Sbjct: 62 RALLAEPRRRWPLIAGSVLISVNWGVYIWGVEQNRVVETSLGYFITPLFTVLLGVFVLGE 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL LQ A + ++++ +T+ +G P A+ +++ Y A+K G+ EG +E
Sbjct: 122 RLRVLQWTALAIAFVAVVGLTIEAGQPPWIALALTLSFGFYGLAKKKAGAGALEGMAVES 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+A AL +V G + ++ G + + +F R ++T+G
Sbjct: 182 ATMAPVALIAIVVMALHGQSTVTGQGPGYLVLVLLTGPITAVPLLLFGAAATRISMTTLG 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ Y AP++ V + + + ++R F +V IA+V++ L + +
Sbjct: 242 LLNYIAPIMQFAVGVLVFHEHMSSMRWAGFALVWIALVLFTLDGLTRRRR 291
>gi|206969059|ref|ZP_03230014.1| rarD protein [Bacillus cereus AH1134]
gi|228953826|ref|ZP_04115865.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229071056|ref|ZP_04204282.1| chloramphenicol-sensitive RarD protein [Bacillus cereus F65185]
gi|229179842|ref|ZP_04307188.1| chloramphenicol-sensitive RarD protein [Bacillus cereus 172560W]
gi|206736100|gb|EDZ53258.1| rarD protein [Bacillus cereus AH1134]
gi|228603523|gb|EEK60998.1| chloramphenicol-sensitive RarD protein [Bacillus cereus 172560W]
gi|228711996|gb|EEL63945.1| chloramphenicol-sensitive RarD protein [Bacillus cereus F65185]
gi|228805794|gb|EEM52374.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 313
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 156/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G L+ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGILYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLLVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|26987100|ref|NP_742525.1| RarD protein, DMT superfamily transporter [Pseudomonas putida
KT2440]
gi|24981728|gb|AAN65989.1|AE016228_2 rarD protein [Pseudomonas putida KT2440]
Length = 295
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ PLY + ++ V +E+I HRVLWS ++ +
Sbjct: 2 HAANPRRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ +G+L S ++A +W +++++ + S Y++ P+I+V LG +
Sbjct: 61 GWWRELRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A + + + +P +SL +A+++ Y RK PV + G
Sbjct: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + + + L+L+ G + F+ + +
Sbjct: 181 VETWMLVPLALGWLLLHPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + F + + +Y + +N K
Sbjct: 241 TLGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNLRKR 294
>gi|260596042|ref|YP_003208613.1| putative chloramphenical resistance permease RarD [Cronobacter
turicensis z3032]
gi|260215219|emb|CBA27083.1| Protein rarD [Cronobacter turicensis z3032]
Length = 297
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 2/296 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G LF AY +WGI P Y + ++ V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLFALAAYFIWGIAPAYFKLIQAVPADEILTHRVIWSFFFM-LALISLSRQWG 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K PK V L SA ++ +W FI+++ S YF+ P+++V LG +FL
Sbjct: 62 SVKRLFSMPKKVFSLALSAVLVGGNWLLFIWSVNNHHLLEASLGYFINPLVNVLLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A LL +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVLLAACGVLVQLWTFGSLPVIALGLAFSFAFYGLVRKKIMVDAQTGMLM 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGSNPWSLNLLLMAAGVVTTIPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G +Y P LM V +V + + + FG + +A+ ++++ + + +
Sbjct: 242 LGFFQYIGPTLMFVLAVVFYGEVPGPDKMVTFGFIWLALAIFIMDALYTQRRLRRS 297
>gi|226360212|ref|YP_002777990.1| hypothetical protein ROP_07980 [Rhodococcus opacus B4]
gi|226238697|dbj|BAH49045.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 305
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 4/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A +G AY+LWG P + L +E+++HRV+W+L +F +
Sbjct: 3 ARQAETVGAACGVGAYVLWGAFPAFFGLLGPAGSVEILAHRVVWTLGLMFVVLAVSGRLR 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
SL + + ++ ++T +AV+WG +IY + + + T+ YF+ P++SV LG V
Sbjct: 63 SLRGLSARTWL---LVAAASTAIAVNWGTYIYGVTSDRVVETALGYFINPLVSVLLGVVI 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFF 197
+ERL QI+A L ++++++T+ G P +A +++ Y +K +P+
Sbjct: 120 FRERLVPAQIVALALAAVAVIVITVDYGHPPYIALTLAASFALYGLCKKVMPLDPRTSLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E V A A+ Y+V+ +G F + TL L+ G + + +F +R L
Sbjct: 180 AEGIVAAPVAVGYLVFLAVTGAGTFLGFGLGHTLLLMAAGPVTALPLLLFGAAAQRVPLR 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G+++Y P L + V +L + + R I F ++ +A+ ++ ++ + +
Sbjct: 240 TLGMLQYLTPALQMAWGVAVLHEDMPASRWIGFALIWVALAIFSTDALVRVRRERRN 296
>gi|187927590|ref|YP_001898077.1| RarD protein, DMT superfamily transporter [Ralstonia pickettii 12J]
gi|187724480|gb|ACD25645.1| RarD protein, DMT superfamily transporter [Ralstonia pickettii 12J]
Length = 298
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 81/294 (27%), Positives = 144/294 (48%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G +F F AY +WG+ PLY + L+ VS +E++SHRV+WSL + ++
Sbjct: 1 MSASNRNGVIFAFLAYTMWGLFPLYFKLLKAVSPVEILSHRVIWSLAVMVVILLA-KRHG 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L P+ VG S ++LA +W +I+A+ S YF+ P++ V L ++
Sbjct: 60 AWLWALRTQPRVVGRYAVSTSLLAANWLTYIWAVNHDHVLEASLGYFINPLVVVMLAALV 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL +Q ++ L + +T +G P ++LA+A ++ Y RKT P+G+ EG
Sbjct: 120 LGERLRPVQWVSVALAAAGVSWLTWQAGTLPWIALALAFSFGFYGLLRKTSPLGALEGLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL Y+ W F + L G L + +F G +R LS
Sbjct: 180 LETLLLFPLALAYLGWLASQHQNAFLAASPGTQWLLALAGPLTALPLLLFGAGARRIPLS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G+++Y +P L ++ V++ +P + + ++ + VY + + +
Sbjct: 240 LLGLLQYVSPTLQLLLGVWLYNEPFAGPKVAGYVLIWAGLAVYSAESWMQLRRR 293
>gi|138895096|ref|YP_001125549.1| chloramphenicol-sensitive protein RarD [Geobacillus
thermodenitrificans NG80-2]
gi|196248323|ref|ZP_03147024.1| RarD protein, DMT superfamily transporter [Geobacillus sp. G11MC16]
gi|134266609|gb|ABO66804.1| Chloramphenicol-sensitive protein RarD [Geobacillus
thermodenitrificans NG80-2]
gi|196212048|gb|EDY06806.1| RarD protein, DMT superfamily transporter [Geobacillus sp. G11MC16]
Length = 309
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 4/299 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---G 77
G + +Y+LWG+ PLY + LE LE+++HR++WS + +
Sbjct: 5 REEKQGITYTAVSYLLWGVLPLYWKLLEARPALEILAHRIIWSFVFMVILLAATGQLTVW 64
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
LK + P + +A +++ +W +I+A+ S Y++ P++SV LG++
Sbjct: 65 RQELKAMRRRPALAWGIAAAALLISANWFIYIWAVTNHHIVEASLGYYINPLVSVALGTI 124
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L+ERL+ Q A L + +M G P ++L++A+++ Y +K V SS G
Sbjct: 125 VLRERLSVGQWFAVFLAAAGVTVMAAEYGSFPWVALSLALSFGLYGLVKKLASVDSSVGL 184
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E V+ + Y++W + L G G + F+ G KR +
Sbjct: 185 TLETMVVMPLSAVYLLWLYNETPALVEAAAWWQWVLLAGAGPATAVPLLYFAKGAKRVSM 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ +G ++Y AP + ++ VF+ +P F + A++++ + + + K K
Sbjct: 245 TMLGFLQYIAPTISLLLGVFLFDEPFTKAHLYAFSCIWAALILFSVVQIRQASGRKKWK 303
>gi|42782624|ref|NP_979871.1| rarD protein [Bacillus cereus ATCC 10987]
gi|42738550|gb|AAS42479.1| rarD protein [Bacillus cereus ATCC 10987]
Length = 313
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 80/301 (26%), Positives = 157/301 (52%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
N S G ++ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 NQSAEQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFMNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+VV+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALVVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|169629783|ref|YP_001703432.1| putative RarD protein [Mycobacterium abscessus ATCC 19977]
gi|169241750|emb|CAM62778.1| Putative RarD protein [Mycobacterium abscessus]
Length = 322
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 75/293 (25%), Positives = 152/293 (51%), Gaps = 4/293 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G LF AY++WG+ P + LE LE+++HR++W+L + +
Sbjct: 8 PEQNRSPKSGYLFGAAAYLMWGLFPAFFPLLEPAGALEILAHRMIWTLLLMAVVVAVSRR 67
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+ L+N +L+ ++ ++A++WG +IYA+ + + Y++ P+++V LG
Sbjct: 68 LRDLVAMGLRNWG---LLIGASLLIALNWGVYIYAVNSGHVLDAALGYYINPLVTVLLGV 124
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V +E L+ Q++A +L ++ ++T+ G P+++L +A +++ Y +KTI V
Sbjct: 125 VLFREPLSRWQLLALVLAFTAVAVLTISVGRLPVITLILAASFAGYGAIKKTITVDPRVS 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E V A A Y+V+ G SG +HF T ++ G++ + +F +R
Sbjct: 185 LTAEGIVAAPFAGAYLVFVGVSGQQHFLGYTHGHTALMVLSGVVTALPLLLFGAAAQRIP 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
L T+G+++Y P L ++ V + + + R + F ++ A+V++ TV ++
Sbjct: 245 LVTLGLLQYVTPTLQMLWGVLVKHEAMPPERWVGFVLIWAALVIFTADTVRSA 297
>gi|229080763|ref|ZP_04213281.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock4-2]
gi|228702497|gb|EEL54965.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock4-2]
Length = 313
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 156/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G L+ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGILYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLLVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMFSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|75761754|ref|ZP_00741693.1| Chloramphenicol-sensitive protein rarD [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228902028|ref|ZP_04066193.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis IBL
4222]
gi|74490763|gb|EAO54040.1| Chloramphenicol-sensitive protein rarD [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228857614|gb|EEN02109.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis IBL
4222]
Length = 313
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 154/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G L+ AY +WGI P+Y +++E+V E++ HR++W+ + + F
Sbjct: 3 SQSAEQKKGILYAAGAYTMWGILPIYWKWVEEVPADEILEHRIVWAFVFMLLVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVVILTVRFGSIPWVSLSLAFSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGAHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|30263507|ref|NP_845884.1| rarD protein [Bacillus anthracis str. Ames]
gi|47528900|ref|YP_020249.1| rarD protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49186358|ref|YP_029610.1| rarD protein [Bacillus anthracis str. Sterne]
gi|52141976|ref|YP_084853.1| chloramphenicol-sensitive rarD protein [Bacillus cereus E33L]
gi|165870971|ref|ZP_02215622.1| rarD protein [Bacillus anthracis str. A0488]
gi|167636284|ref|ZP_02394586.1| rarD protein [Bacillus anthracis str. A0442]
gi|167640583|ref|ZP_02398845.1| rarD protein [Bacillus anthracis str. A0193]
gi|170688454|ref|ZP_02879662.1| rarD protein [Bacillus anthracis str. A0465]
gi|170708148|ref|ZP_02898595.1| rarD protein [Bacillus anthracis str. A0389]
gi|177652490|ref|ZP_02934957.1| rarD protein [Bacillus anthracis str. A0174]
gi|190564999|ref|ZP_03017920.1| rarD protein [Bacillus anthracis Tsiankovskii-I]
gi|196044535|ref|ZP_03111770.1| rarD protein [Bacillus cereus 03BB108]
gi|218904683|ref|YP_002452517.1| rarD protein [Bacillus cereus AH820]
gi|225865541|ref|YP_002750919.1| rarD protein [Bacillus cereus 03BB102]
gi|227813612|ref|YP_002813621.1| rarD protein [Bacillus anthracis str. CDC 684]
gi|229602744|ref|YP_002867753.1| rarD protein [Bacillus anthracis str. A0248]
gi|254686125|ref|ZP_05149984.1| chloramphenicol-sensitive RarD protein [Bacillus anthracis str.
CNEVA-9066]
gi|254723523|ref|ZP_05185311.1| chloramphenicol-sensitive RarD protein [Bacillus anthracis str.
A1055]
gi|254738597|ref|ZP_05196300.1| chloramphenicol-sensitive RarD protein [Bacillus anthracis str.
Western North America USA6153]
gi|254744843|ref|ZP_05202521.1| chloramphenicol-sensitive RarD protein [Bacillus anthracis str.
Kruger B]
gi|254752915|ref|ZP_05204951.1| chloramphenicol-sensitive RarD protein [Bacillus anthracis str.
Vollum]
gi|254759187|ref|ZP_05211213.1| chloramphenicol-sensitive RarD protein [Bacillus anthracis str.
Australia 94]
gi|30258142|gb|AAP27370.1| rarD protein [Bacillus anthracis str. Ames]
gi|47504048|gb|AAT32724.1| rarD protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180285|gb|AAT55661.1| rarD protein [Bacillus anthracis str. Sterne]
gi|51975445|gb|AAU16995.1| possible chloramphenicol-sensitive rarD protein [Bacillus cereus
E33L]
gi|164713182|gb|EDR18708.1| rarD protein [Bacillus anthracis str. A0488]
gi|167511451|gb|EDR86835.1| rarD protein [Bacillus anthracis str. A0193]
gi|167528307|gb|EDR91079.1| rarD protein [Bacillus anthracis str. A0442]
gi|170126956|gb|EDS95836.1| rarD protein [Bacillus anthracis str. A0389]
gi|170667624|gb|EDT18379.1| rarD protein [Bacillus anthracis str. A0465]
gi|172082164|gb|EDT67231.1| rarD protein [Bacillus anthracis str. A0174]
gi|190564316|gb|EDV18280.1| rarD protein [Bacillus anthracis Tsiankovskii-I]
gi|196024570|gb|EDX63242.1| rarD protein [Bacillus cereus 03BB108]
gi|218537162|gb|ACK89560.1| rarD protein [Bacillus cereus AH820]
gi|225788104|gb|ACO28321.1| rarD protein [Bacillus cereus 03BB102]
gi|227006199|gb|ACP15942.1| rarD protein [Bacillus anthracis str. CDC 684]
gi|229267152|gb|ACQ48789.1| rarD protein [Bacillus anthracis str. A0248]
Length = 313
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 78/305 (25%), Positives = 158/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-- 71
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGV 58
Query: 72 -VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
F + + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMSSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + + I F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|301055045|ref|YP_003793256.1| RarD-like protein [Bacillus anthracis CI]
gi|300377214|gb|ADK06118.1| RarD-like protein [Bacillus cereus biovar anthracis str. CI]
Length = 313
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 78/305 (25%), Positives = 158/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-- 71
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGV 58
Query: 72 -VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
F + + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFANLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMSSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + + I F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|77461402|ref|YP_350909.1| RarD protein [Pseudomonas fluorescens Pf0-1]
gi|77385405|gb|ABA76918.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 295
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ PLY + + +V +E+I HRVLWS ++ +
Sbjct: 2 QAANPRRGYILGLSAYIIWGLFPLYFKAIAEVPAVEIIIHRVLWSALFGALLLMVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NPK + +L S T++A +W +++++ + S Y++ P+++V LG +
Sbjct: 61 GWWQELRDNPKRLAILALSGTLIAANWLTYVWSVNNGRMLEASLGYYINPLVNVLLGMLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL +Q +A L + + +P +SL +A+T+ Y RK P+ + G
Sbjct: 121 LGERLRRMQWLAVGLAAIGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPIKALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++++N + + +L+ G + F+ + +
Sbjct: 181 VETWMLVPIALAWLLFNPTATSAQAEFWTTSEAWWLVAAGPVTLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + I F + + VY + ++ +
Sbjct: 241 TLGFLQYLAPTLVLLQAVLLFGEHLSSSTLIAFMFIWAGLAVYSVDAWMSLRRR 294
>gi|117922197|ref|YP_871389.1| transporter DMT superfamily protein [Shewanella sp. ANA-3]
gi|117614529|gb|ABK49983.1| RarD protein, DMT superfamily transporter [Shewanella sp. ANA-3]
Length = 295
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 2/290 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L AY +WG PLY + L VS E++ HRV+WS + +++ G L+
Sbjct: 7 RKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMLFIGG-FGKLRQ 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG +FL ERL
Sbjct: 66 LFKQPKQLLVLTITSLLIAANWLIFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LQ A L +LI + G IP++SLA+A T+ Y RK + V + G +E +
Sbjct: 126 RKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGVYALLRKKVNVDAKSGLLVETAI 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL Y+V S + + L L+ G++ + F+ R LS +G
Sbjct: 186 LLPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSMLGFF 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+Y P +M + +V + +P D ++I FG + A++V+ +
Sbjct: 246 QYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFDMAYKRKTAR 295
>gi|228966446|ref|ZP_04127499.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228793168|gb|EEM40718.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 313
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 154/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G L+ AY +WGI P+Y +++E+V E++ HR++W+ + + F
Sbjct: 3 SQSAEQKKGILYAAGAYTMWGILPIYWKWVEEVPADEILVHRIVWAFVFMLLVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVVILTVRFGSIPWVSLSLAFSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGAHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|156743363|ref|YP_001433492.1| transporter DMT superfamily protein [Roseiflexus castenholzii DSM
13941]
gi|156234691|gb|ABU59474.1| RarD protein, DMT superfamily transporter [Roseiflexus castenholzii
DSM 13941]
Length = 308
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 74/286 (25%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L+ AY WG+ P++ + L+ + LE+++HR++W+ ++ S +
Sbjct: 3 KGVLYAAGAYACWGLLPVFWKLLQHLDALEIVAHRIIWASAF-AVVLLTVGRRWSRIGGV 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+N + + + + +L +W +I+ + T TS YF+ P+++V LG++ L ERL
Sbjct: 62 WRNRRVLATFLVTGVLLTANWFVYIWGVNTNHIVETSLGYFINPLVNVLLGALVLHERLR 121
Query: 145 HLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A + ++ +L +T G P ++L +A T++ Y RKT + S EGF +E +L
Sbjct: 122 IGQGLAMSVALIGVLYLTFQYGTFPWIALILAGTFALYGLLRKTASLDSLEGFSLETALL 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
P + ++ + + F G+ L LI G + + +F+ G +R L T+G+++
Sbjct: 182 IPPMVAFLAYRELTTHTTFIHGDPLTWLLLIAAGPITAIPLLLFAAGARRVSLVTLGVLQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y AP L + V + +P+ R I F ++ A+ +Y +++
Sbjct: 242 YIAPTLQFLIGVGLYGEPLTLPRLIGFVLIWAALAIYTFDGIMHWW 287
>gi|49479471|ref|YP_037639.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49331027|gb|AAT61673.1| possible chloramphenicol-sensitive RarD protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 313
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 78/305 (25%), Positives = 158/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-- 71
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGV 58
Query: 72 -VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
F + + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFVNLFKRPKLLISLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMSSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + + I F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|323357259|ref|YP_004223655.1| permease [Microbacterium testaceum StLB037]
gi|323273630|dbj|BAJ73775.1| predicted permease [Microbacterium testaceum StLB037]
Length = 313
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 65/298 (21%), Positives = 140/298 (46%), Gaps = 4/298 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L+ AY+LWG+ P+Y L+ EV++ R++ + + L
Sbjct: 11 ESTRGALYALGAYLLWGVLPIYFLQLKPTGPFEVVAWRIILAFVFCLILLTVLRAWRPFL 70
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ P+ +G+ + ++ ++W ++Y LT TS YF+ P+++V LG + L+E
Sbjct: 71 -AIVRQPRLMGLTAVAGVLIYINWQTYLYGALTNHVIETSLGYFINPIVTVLLGVIVLRE 129
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSEGFFI 198
RL + IA L ++++ ++ + G A + + + V + G +
Sbjct: 130 RLRVVPWIAIGLAVVAVAVIVIGYGAFPWIALTLAFSFGFYGLVKKQIGPAVDAVSGLTL 189
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A +++ G T+ L+ G + + +F+ G +R L+
Sbjct: 190 ESLWLLPVAAIQLLFVANLTGITLGTAGTLHTVLLLLAGAVTAVPLLLFASGARRVPLTV 249
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+G++++ AP++ V++L +P+ R I F +V +A+VV + +++ S +++ S
Sbjct: 250 IGLLQFVAPIIQFAIGVWVLGEPMTVERWIGFALVWVALVVLSVDSIVMSRRHRAAIS 307
>gi|114045874|ref|YP_736424.1| transporter DMT superfamily protein [Shewanella sp. MR-7]
gi|113887316|gb|ABI41367.1| RarD protein, DMT superfamily transporter [Shewanella sp. MR-7]
Length = 294
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 85/290 (29%), Positives = 140/290 (48%), Gaps = 2/290 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L AY +WG PLY + L VS E++ HRV+WS + +++ G
Sbjct: 4 NEYRKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMLFIGG-FGK 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ K PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG +FL
Sbjct: 63 LRQLFKQPKQLLVLTITSLLIAANWLIFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLG 122
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ A L +LI + IP++SLA+A T+ Y RK + V + G +E
Sbjct: 123 ERLRKLQWFAVALASAGVLIQLVSFGSIPIVSLALAGTFGVYALLRKKVNVDAKSGLLVE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L AL Y+V S + + L L+ G++ + F+ R LS +
Sbjct: 183 TAILLPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSML 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G +Y P +M + +V + +P D ++I FG + A++V+
Sbjct: 243 GFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFDMAYKRK 292
>gi|113971920|ref|YP_735713.1| transporter DMT superfamily protein [Shewanella sp. MR-4]
gi|113886604|gb|ABI40656.1| RarD protein, DMT superfamily transporter [Shewanella sp. MR-4]
Length = 294
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 2/290 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L AY +WG PLY + L VS E++ HRV+WS + +++ G
Sbjct: 4 NEYRKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMLFIGG-FGK 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ K PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG +FL
Sbjct: 63 LRQLFKQPKQLLVLTITSLLIAANWLIFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLG 122
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ A L +LI + IP++SLA+A T+ Y RK + V + G +E
Sbjct: 123 ERLRKLQWFAVSLASAGVLIQLVSFGSIPIVSLALAGTFGVYALLRKKVNVDAKSGLLVE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L AL Y+V S + + + L+ G++ + F+ R LS +
Sbjct: 183 TAILLPVALVYLVATLDSATANMLTNDWHLNVLLMAAGIVTTIPLLCFAGAAVRIPLSML 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G +Y P +M + +V + +P D ++I FG + A++V+
Sbjct: 243 GFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFDMAYKRK 292
>gi|313496723|gb|ADR58089.1| RarD [Pseudomonas putida BIRD-1]
Length = 295
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ PLY + ++ V +E+I HRVLWS ++ +
Sbjct: 2 HAANPRRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ +G+L S ++A +W +++++ + S Y++ P+I+V LG +
Sbjct: 61 GWWRELRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A + + + +P +SL +A+++ Y RK PV + G
Sbjct: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L A+ +++ + + + L+L+ G + F+ + +
Sbjct: 181 VETWMLVPLAIGWLLLHPAAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + F + + +Y + +N K
Sbjct: 241 TLGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNLRKR 294
>gi|324327456|gb|ADY22716.1| putative chloramphenicol-sensitive rarD protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 313
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 157/301 (52%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G ++ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+VV+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALVVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|196034092|ref|ZP_03101502.1| rarD protein [Bacillus cereus W]
gi|195993166|gb|EDX57124.1| rarD protein [Bacillus cereus W]
Length = 313
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 78/305 (25%), Positives = 158/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-- 71
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGV 58
Query: 72 -VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
F + + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQFVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMSSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + + I F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|308188861|ref|YP_003932992.1| DMT superfamily transporter [Pantoea vagans C9-1]
gi|308059371|gb|ADO11543.1| Putative DMT superfamily transporter [Pantoea vagans C9-1]
Length = 299
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 87/298 (29%), Positives = 151/298 (50%), Gaps = 2/298 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P Y + ++QV E+++HRV+WS + ++ S
Sbjct: 3 TQQTRQGVGFALGAYFIWGIAPAYFKLVKQVPATEIMTHRVIWSALFMLL-LITLSRSWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L+ PK V +L +A + +W FI+A+ + S YF+ P+I+V G +FL
Sbjct: 62 GVRSVLRQPKKVLLLAITALTIGGNWLLFIWAVNNQHMLEASLGYFINPLINVVFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ER LQ +A LL + +L+ G P+++L +A++++ Y RK I V + G I
Sbjct: 122 RERFRRLQWLAVLLATVGVLVQLWQFGSLPVIALGLALSFAVYGLMRKKIQVDAQSGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + +F+ R +LST
Sbjct: 182 ETLWLFPLAAIYLFGFADSATSHLSANPLSLNLKLIAAGIVTTIPLMLFAAACSRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
VG +Y P LM V +V + I + + FG + +A++V++ V S +++ + +
Sbjct: 242 VGFFQYLGPTLMFVLAVAFYGETITPDKMVTFGFIWLALLVFVCDAVAFSFRSRARIA 299
>gi|70732983|ref|YP_262756.1| rarD protein [Pseudomonas fluorescens Pf-5]
gi|68347282|gb|AAY94888.1| rarD protein [Pseudomonas fluorescens Pf-5]
Length = 295
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 66/295 (22%), Positives = 141/295 (47%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ PLY + + V +E+I HRVLWS ++ +
Sbjct: 2 QAANPRRGYILGLTAYIIWGLFPLYFKAIASVPAVEIIIHRVLWSALFGALLLMVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ + +L S T++A +W +++++ + S Y++ P+++V LG +
Sbjct: 61 GWWRELRDNPRRLAILALSGTLIAANWLTYVWSVNNGRMLEASLGYYINPLVNVLLGMLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL +Q +A +L + + +P +SL +A+++ Y RK PV + G
Sbjct: 121 LGERLRRMQWLAVILAAVGVAQQVWQVGSLPWVSLMLALSFGFYGLIRKQAPVKALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + + H + +L+ G + F+ + +
Sbjct: 181 VETWMLVPIALGWLLLHPDASSAHAEFWSSSQAWWLVAAGPVTLVPLVCFNAAARDLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+G ++Y AP L+++ +V + + + + + F + + VY + ++ +
Sbjct: 241 TLGFLQYLAPTLVLLQAVLLFDEHLSSSTLLAFMFIWAGLAVYSVDAWLSLRGRR 295
>gi|15964870|ref|NP_385223.1| hypothetical protein SMc02545 [Sinorhizobium meliloti 1021]
gi|307300941|ref|ZP_07580710.1| RarD protein, DMT superfamily transporter [Sinorhizobium meliloti
BL225C]
gi|307321844|ref|ZP_07601230.1| RarD protein, DMT superfamily transporter [Sinorhizobium meliloti
AK83]
gi|15074049|emb|CAC45696.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306892513|gb|EFN23313.1| RarD protein, DMT superfamily transporter [Sinorhizobium meliloti
AK83]
gi|306903896|gb|EFN34482.1| RarD protein, DMT superfamily transporter [Sinorhizobium meliloti
BL225C]
Length = 313
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 87/295 (29%), Positives = 168/295 (56%), Gaps = 3/295 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P + + + + EV++HR++WS+P +V+ +K
Sbjct: 15 SPKGFAFALAAYLLWGFLPFFMKAVSHIPAAEVVAHRIVWSVPLAGLVLVWLGRT-QDVK 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A ++ ++WG +++A+ + T+ Y++ P+ S+FLG++ LKER
Sbjct: 74 VALRSPRVLMMATVTAALITINWGIYVWAIGAGRAIETALGYYINPLFSIFLGALLLKER 133
Query: 143 LNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
N Q++A L L++ ++ G+P +S+ + +W Y F RKT+PVG ++GFF+E+
Sbjct: 134 PNPAQMVAIGLAALAVGVLAFDAGGLPWVSIGLCFSWGFYAFFRKTLPVGPNQGFFLEVL 193
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLNSFVFCIFSYGIKRAKLSTVG 260
+L+IPA YV+W +G HF + + L+ ++ + I++ G K +LST+G
Sbjct: 194 LLSIPAAGYVIWLEATGQGHFLGDSNMTDVLLLLACGIVTAVPLMIYANGAKLLRLSTIG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
IM+Y AP ++ + +VF+ +P T + + F ++ A+ +Y + S + +
Sbjct: 254 IMQYIAPTMIFLIAVFVFHEPFGTAKLVAFALIWAALFIYSGAMLAESRARRAAQ 308
>gi|229157129|ref|ZP_04285209.1| chloramphenicol-sensitive RarD protein [Bacillus cereus ATCC 4342]
gi|228626193|gb|EEK82940.1| chloramphenicol-sensitive RarD protein [Bacillus cereus ATCC 4342]
Length = 313
Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 155/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G ++ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLNYDTT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIMYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWGALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|152981079|ref|YP_001355222.1| transporter of the DMT superfamily chloramphenicol-sensitivity
protein (rarD family) [Janthinobacterium sp. Marseille]
gi|151281156|gb|ABR89566.1| transporter of the DMT superfamily, Chloramphenicol-Sensitivity
Protein (rarD family) [Janthinobacterium sp. Marseille]
Length = 296
Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 77/287 (26%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L+ CAY+ WG P+Y + L ++ LE++ HR++W+L + ++ + L L
Sbjct: 4 GMLYALCAYVAWGSFPIYFKSLHDIAPLEILLHRMVWALGFL-LIVLAVRRQWAWLSAVL 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ PK + SA +L+ +W +I+A+ + S YF+TP+++V LG + L ERL
Sbjct: 63 RQPKVLAGFTASALLLSTNWFVYIWAVNHDRIIDASLGYFMTPLVNVLLGFLVLGERLRR 122
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ A + L + +T +G P + L + +T+ Y RKT +G+ EG +E +L
Sbjct: 123 LQWAAVFVAALGVAWLTWENGHLPWIGLTLGLTFGTYGLLRKTAKLGALEGLSLETLLLF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ + ++G F L+ G + + +F+ +R LST+G+++Y
Sbjct: 183 PLAVLALAVMAWNGSNSFIHAPTASQWLLVAAGPITAIPLLLFATAARRIPLSTLGLLQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P L ++ V++ +P + R + F + IA+ +Y + + +
Sbjct: 243 ITPTLQLLVGVWLYHEPFSSARLVGFAAIWIALGLYSADGLWQNYRQ 289
>gi|206975352|ref|ZP_03236265.1| rarD protein [Bacillus cereus H3081.97]
gi|217960959|ref|YP_002339527.1| rarD protein [Bacillus cereus AH187]
gi|222097013|ref|YP_002531070.1| chloramphenicol-sensitive rard protein [Bacillus cereus Q1]
gi|229140171|ref|ZP_04268729.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BDRD-ST26]
gi|206746254|gb|EDZ57648.1| rarD protein [Bacillus cereus H3081.97]
gi|217062943|gb|ACJ77193.1| rarD protein [Bacillus cereus AH187]
gi|221241071|gb|ACM13781.1| possible chloramphenicol-sensitive rarD protein [Bacillus cereus
Q1]
gi|228643257|gb|EEK99530.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BDRD-ST26]
Length = 313
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 156/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G ++ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|330831533|ref|YP_004394485.1| RarD protein [Aeromonas veronii B565]
gi|328806669|gb|AEB51868.1| RarD protein [Aeromonas veronii B565]
Length = 298
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ CAY LWGI P+Y + + V E+++HR++WS + +
Sbjct: 2 PQQIQRQGVIYALCAYTLWGIAPIYFKTISAVPAAEILTHRMIWSCV-LLMVLTLAGRQW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ L+ PK + L F++ + +W FI+A+ S Y++ P+ +V LG VF
Sbjct: 61 HKVQAVLRQPKVLLTLAFTSVTVGGNWLLFIWAINNGHMLDASLGYYINPLFNVLLGMVF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E+L LQ A L + I + G P ++L +A +++ Y RK + + + G
Sbjct: 121 LSEKLRRLQWWAVALAFAGVAIQLIAFGSLPWIALVLASSFAIYGLVRKKLALDALTGLL 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE ++ PA Y+ S H + L LI G + + F+ R KLS
Sbjct: 181 IETMIMLPPAAIYLWGFADSPTSHLTQNDWHLNLLLIAAGAVTTAPLLCFTAAATRLKLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G +Y P LM + +V + + + + + F + A+V++ L + +
Sbjct: 241 TLGFFQYIGPSLMFILAVTLYGEALAMDKLLTFACIWSALVLFSLDGLRSGK 292
>gi|323144131|ref|ZP_08078770.1| putative membrane protein [Succinatimonas hippei YIT 12066]
gi|322416108|gb|EFY06803.1| putative membrane protein [Succinatimonas hippei YIT 12066]
Length = 500
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 91/301 (30%), Gaps = 16/301 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + ++WG TP + L +S L + R + + +F + + D
Sbjct: 7 YLALVAVCLVWGATPACGKILSTSMSPLLITGLRFVLTAGILFSWLFITGQKKAFRPD-- 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + VH G L T+ + P + L +F+ ERL+
Sbjct: 65 -KKFIPFLIFMGFMGITVHNGLLFTGLHYTTATNTALIESIGPTATTILAFLFVGERLSR 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
+ + L + + +L + S
Sbjct: 124 RGWVGIFISCCGALCIVTKGSLDVLINMGFNIGDLLIVACEIAWSCYVILGWKAQKSRLS 183
Query: 196 FFIEMCV--LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L L +++ E + + FL F F +++ + +
Sbjct: 184 ATALTAWNGLFGGLLCFIIGFATGTLEVWQVNAQAVYGFLYLLLASGVFAFVTWNFAVAK 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S G+ Y PL + V L + I + + +++ +VV + V + K
Sbjct: 244 VGASKAGVFVYLVPLTGAIIGVTFLGEEILLSQIVGGLLIISGVVVTVRAKVQLKSEEKK 303
Query: 314 K 314
Sbjct: 304 A 304
>gi|228986644|ref|ZP_04146774.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228772975|gb|EEM21411.1| chloramphenicol-sensitive RarD protein [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 313
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 156/301 (51%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G ++ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASFLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F +I TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIMYLVMTGVHGFGSFGSISILSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VG ++Y AP + ++ VF+ + + I F + +A+ V+ + + +
Sbjct: 243 IPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLVQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|227821442|ref|YP_002825412.1| putative RarD protein, chloramphenicol transporter [Sinorhizobium
fredii NGR234]
gi|227340441|gb|ACP24659.1| putative RarD protein, chloramphenicol transporter [Sinorhizobium
fredii NGR234]
Length = 312
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 86/302 (28%), Positives = 174/302 (57%), Gaps = 2/302 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + G F AY+LWG P + + + + EV++HR++WS+P +++
Sbjct: 7 KQPAENTDSARGFAFALTAYLLWGFLPFFMKAVAHIPAPEVVAHRIVWSVPLAGLVLLWL 66
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
++ L++P+ + M +A ++ V+WG +++A+ + T+ Y++ P+ S+FL
Sbjct: 67 GRT-QEIRTALRSPRMLKMATLTAALITVNWGIYVWAIGAGRAIETALGYYINPLFSIFL 125
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G++ LKER + Q++A L L++ ++ G+P +S+ + ++W Y F RKT+P+G +
Sbjct: 126 GALLLKERPSPTQMVAIALAALAVAVLAFDAGGLPWVSIGLCISWGFYAFFRKTLPIGPN 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+GFF+E+ +L++PA+ Y++W +G HF + D + L+ GL+ + I++ G K
Sbjct: 186 QGFFLEVLLLSVPAIGYIIWLEATGQGHFGDTTMTDVVLLLSCGLVTAVPLMIYANGAKL 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+LST+GIM+Y AP ++ V +VF+ +P + I F ++ A+ +Y ++ S +
Sbjct: 246 LRLSTIGIMQYIAPTMIFVIAVFVFHEPFGVAKLIAFALIWAALFIYSGAMLVESRARRA 305
Query: 314 KK 315
+
Sbjct: 306 AQ 307
>gi|156935858|ref|YP_001439774.1| hypothetical protein ESA_03741 [Cronobacter sakazakii ATCC BAA-894]
gi|156534112|gb|ABU78938.1| hypothetical protein ESA_03741 [Cronobacter sakazakii ATCC BAA-894]
Length = 297
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY +WGI P Y + ++ V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVFFALAAYFIWGIAPAYFKLIQAVPADEILTHRVIWSFFFM-LALISLSRQWG 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K PK V L SA ++ +W FI+A+ S YF+ P+++V LG +FL
Sbjct: 62 SVKRLFATPKKVFSLALSAVLVGGNWLLFIWAVNNHHLLEASLGYFINPLVNVLLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A LL +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVLLAACGVLVQLWTFGSLPVIALGLAFSFAFYGLVRKKIMVDAQTGMLM 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGSNPWSLNLLLMAAGVVTTIPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + FG + +A+ ++++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVVFYGEVPGPDKMVTFGFIWLALAIFIMDALYTQRRLRQ 296
>gi|56415809|ref|YP_152884.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62182424|ref|YP_218841.1| chloramphenicol resistance [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|168244645|ref|ZP_02669577.1| RarD protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168263154|ref|ZP_02685127.1| RarD protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168467629|ref|ZP_02701466.1| RarD protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194445006|ref|YP_002043185.1| RarD protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194449124|ref|YP_002047966.1| hypothetical protein SeHA_C4282 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197364739|ref|YP_002144376.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198244767|ref|YP_002217884.1| RarD protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200387742|ref|ZP_03214354.1| RarD protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|224585770|ref|YP_002639569.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|56130066|gb|AAV79572.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62130057|gb|AAX67760.1| chloramphenicol resistance [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194403669|gb|ACF63891.1| RarD protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194407428|gb|ACF67647.1| RarD protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195629979|gb|EDX48639.1| RarD protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197096216|emb|CAR61813.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197939283|gb|ACH76616.1| RarD protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199604840|gb|EDZ03385.1| RarD protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205336528|gb|EDZ23292.1| RarD protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205348179|gb|EDZ34810.1| RarD protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|224470298|gb|ACN48128.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|322716917|gb|EFZ08488.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|326625672|gb|EGE32017.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 295
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|146309107|ref|YP_001189572.1| transporter DMT superfamily protein [Pseudomonas mendocina ymp]
gi|145577308|gb|ABP86840.1| RarD protein, DMT superfamily transporter [Pseudomonas mendocina
ymp]
Length = 297
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 75/297 (25%), Positives = 139/297 (46%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ G + AYI+WG+ PLY + L+ V +E+I HRVLWS ++ +
Sbjct: 2 ATANPQRGYILGLTAYIIWGLFPLYFKALQSVPAMEIIVHRVLWSALFGGLLLLVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NPK + +L ++A +W +++A+ + + S Y++ P+I+V LG +
Sbjct: 61 GWWRELRDNPKRLAVLAGCGLLIATNWLVYVWAVNSERMIEASLGYYINPLINVLLGLLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L L +L +P +SL +A+T+ Y RK PV + G
Sbjct: 121 LGERLRRLQWLAVGLAALGVLQQLWQVGSLPWVSLVLALTFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++V + + + L+L G + F+ + +
Sbjct: 181 VETWLLLPVALAWLVLHPAAMSSQASFWTSSEALWLAAAGPITLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G ++Y AP L+++ ++ + + + F + + VY L ++ K
Sbjct: 241 TLGFLQYLAPTLVLLQAILLFDEHFSPSTLLAFACIWAGLFVYSLDIWLSLRKRSNA 297
>gi|167031402|ref|YP_001666633.1| transporter DMT superfamily protein [Pseudomonas putida GB-1]
gi|166857890|gb|ABY96297.1| RarD protein, DMT superfamily transporter [Pseudomonas putida GB-1]
Length = 295
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYI+WG+ P+Y + ++ V +E+I HRVLWS ++ +
Sbjct: 2 HAANPRRGYTLGLSAYIIWGLFPIYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ +G+L S ++A +W +++++ + S Y++ P+I+V LG +
Sbjct: 61 GWWRELRDNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A + + + +P +SL +A+++ Y RK PV + G
Sbjct: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + + + L+L+ G + F+ + +
Sbjct: 181 VETWMLVPLALGWLLLHPAAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + + F + + +Y + N K
Sbjct: 241 TLGFLQYLAPTLVLLQAVLLFDEHLSSSTLVAFMFIWAGLAIYSVDAWWNLRKR 294
>gi|78356397|ref|YP_387846.1| rarD protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78218802|gb|ABB38151.1| rarD protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 300
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 3/298 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L A++LWG+ PLY + L V LEV+ HR++WSL V +
Sbjct: 4 SGKNPVAGGLAAVGAFVLWGLLPLYWKMLHSVPPLEVLGHRIVWSLVFVAVLMQVTRR-W 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + + + ++ + ++ +W +I+A+ + TS Y++TP+++V +G V
Sbjct: 63 DELRRAVSSVRNMAVMAVAGVLVGGNWFLYIWAVNNGRVLETSLGYYITPLLNVLMGCVL 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E+L+ Q A +L + + G P ++L +A ++S Y RKT V S G F
Sbjct: 123 LGEQLSKGQKAALVLAAAGVAVQLTMLGRLPWVALVLAGSFSVYGLLRKTANVESVPGLF 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E VL L Y+VW +GG G L G G+ S +F++ +R L
Sbjct: 183 FETAVLTPVVLVYLVWLDGNGGAFGHAGTAVSL-LLAGAGVCTSVPLLLFAFAARRMHLG 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
TVGI++Y AP + + VF+ +P R I F + +A+ +Y ++ + ++
Sbjct: 242 TVGILQYIAPTIAFMLGVFVFDEPFSAGRLISFCFIWLAVAIYSGESLWKRRRRAVQQ 299
>gi|16767225|ref|NP_462840.1| chloramphenicol resistance [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167993894|ref|ZP_02574987.1| RarD protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168233889|ref|ZP_02658947.1| RarD protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168822674|ref|ZP_02834674.1| RarD protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194472630|ref|ZP_03078614.1| RarD protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197263820|ref|ZP_03163894.1| RarD protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|238912958|ref|ZP_04656795.1| chloramphenicol resistance [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|24212200|sp|Q9L6P1|RARD_SALTY RecName: Full=Protein rarD
gi|6960247|gb|AAF33437.1| 90% identity with E. coli rarD gene product (RARD) (SP:P27844);
contains similarity to Pfam family PF00892 (Integral
membrane protein), score=17.4, E=0.05, N=1 [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16422519|gb|AAL22799.1| chloramphenicol resistance [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194458994|gb|EDX47833.1| RarD protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197242075|gb|EDY24695.1| RarD protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205328142|gb|EDZ14906.1| RarD protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205332054|gb|EDZ18818.1| RarD protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205340960|gb|EDZ27724.1| RarD protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|261249078|emb|CBG26939.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267996235|gb|ACY91120.1| chloramphenicol resistance [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160470|emb|CBW20000.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312915073|dbj|BAJ39047.1| chloramphenicol resistance protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320088366|emb|CBY98126.1| Uncharacterized transporter VC_0195 [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321225473|gb|EFX50530.1| Protein rarD [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132302|gb|ADX19732.1| chloramphenicol resistance [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332990790|gb|AEF09773.1| chloramphenicol resistance [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 294
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + K
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRKK 294
>gi|119962357|ref|YP_948768.1| integral membrane protein (rarD protein) [Arthrobacter aurescens
TC1]
gi|119949216|gb|ABM08127.1| putative Integral membrane protein (rarD protein) [Arthrobacter
aurescens TC1]
Length = 361
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 4/299 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G LF AY LWG+ PLY L S +E++++R++WSL I
Sbjct: 54 RSESTAGILFGIGAYGLWGLLPLYFFVLMPASAMEIVANRIVWSLLFCALLITVTR-AWK 112
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +K+ G L +A ++A++W + + + T TS YF+ P++SV LG L
Sbjct: 113 TLWAAVKDSSVFGPLALAAVLIAINWLTYTFGVTTGHAVETSLGYFINPLVSVLLGVFVL 172
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---AVTWSAYCFARKTIPVGSSEGF 196
KE+L LQ A + +++ ++T G I + + R V +
Sbjct: 173 KEKLRPLQWAAVGIGFVAVGVLTFSYGQLPWIALILAFSFGLYGFVKKRVGPKVDALTSL 232
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E VLA A +V G +G + L+ G++ + F +R +
Sbjct: 233 SVETVVLAPFAGITMVVLGVTGVQTLTTLGAGHFWLLVASGVITAVPLLFFGASARRLPM 292
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+T+G+++Y AP+L + ++ + + + T R I F +V +A+V+ + + + KN K
Sbjct: 293 TTIGLLQYFAPVLQFIVALTVFNETMTTARWIGFCVVWLALVLLTIDMLRTTRKNSVMK 351
>gi|229092523|ref|ZP_04223679.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock3-42]
gi|228690810|gb|EEL44585.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock3-42]
Length = 313
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 78/305 (25%), Positives = 158/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-- 71
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEKVPADEILAHRIVWAFVFMLIVLGV 58
Query: 72 -VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
F + + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMSSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + + I F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|254504563|ref|ZP_05116714.1| RarD protein [Labrenzia alexandrii DFL-11]
gi|222440634|gb|EEE47313.1| RarD protein [Labrenzia alexandrii DFL-11]
Length = 307
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 84/303 (27%), Positives = 161/303 (53%), Gaps = 2/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ A G LF AY +WG P Y + + VS V++HR+ WS+ V + Y
Sbjct: 1 MTRTEAENELRRGLLFGLAAYGMWGFFPAYYKLTDTVSADLVVAHRIAWSVLFVGGFL-Y 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + D +P + L SA+ ++V+W F++A+ Q S YF+ P++S+
Sbjct: 60 LRGRWQEVLDVFADPAVLKRLAMSASFISVNWLVFVWAIANEQVLDVSLGYFINPLVSIL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIM-TLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+G + L+ER++ Q IA + ++++ L G+P +SL +A +++ Y + RK PV +
Sbjct: 120 VGLIVLRERMSKWQYIAVAMAGFAVVLQAVLAGGLPWVSLVLAFSFAGYGYVRKVTPVKA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ G F+E +L A+ Y++ + G + L +IP + L G G++ + FS +
Sbjct: 180 TPGLFVETVLLFPIAMGYLLLSLSWGVDALILDDIPVLMALAGTGIVTALPLICFSSAAR 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R L +G+M+Y AP + + +V++ +P+D + + F ++ IA+VV+ + N+ +
Sbjct: 240 RLPLFMLGLMQYIAPSIHFLMAVYVWGEPLDQAKLLGFVMIWIALVVFTFDSWRNARNAR 299
Query: 313 TKK 315
+
Sbjct: 300 KAQ 302
>gi|152975961|ref|YP_001375478.1| transporter DMT superfamily protein [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024713|gb|ABS22483.1| RarD protein, DMT superfamily transporter [Bacillus cytotoxicus NVH
391-98]
Length = 315
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 151/303 (49%), Gaps = 4/303 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---V 72
E+ G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MESQKALQRKGIIYAAGAYTMWGILPVYWKWVEEVPAEEILAHRIVWAFVFMLIVLGVSK 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F +S L PK L ++ ++ +W +I+A+ S Y++ P++S+
Sbjct: 61 RFGQFMSELMKLFTQPKLFISLTIASILITGNWFVYIWAVNHGHIIEASLGYYINPLVSI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVG 191
LG+V LKE+LN Q +A L + ++I+T+ G IP ++L++A T+ Y +K +
Sbjct: 121 VLGTVVLKEKLNFWQYVAVGLAGVGVVILTVRYGEIPWIALSLACTFGLYGLTKKLLNYD 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G +E ++ A Y+ G G F +I +TL L+G G + + F+ G
Sbjct: 181 AMNGLTLETMIVTPVAAIYLFMVGAHGFGSFGSISIAETLLLMGAGAVTALPLFYFAKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+R L +G ++Y AP + ++ +FI + + + F + IA+ ++ + K
Sbjct: 241 QRIPLYMIGFLQYIAPTINLILGIFIFHEHFTSAHIMAFLFIWIALFIFSIAKTKFLLKK 300
Query: 312 KTK 314
+ K
Sbjct: 301 QPK 303
>gi|260775109|ref|ZP_05884008.1| protein rarD [Vibrio coralliilyticus ATCC BAA-450]
gi|260609026|gb|EEX35186.1| protein rarD [Vibrio coralliilyticus ATCC BAA-450]
Length = 283
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/279 (28%), Positives = 145/279 (51%), Gaps = 2/279 (0%)
Query: 36 LWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
+WGI P+Y + + +VS E++SHRV+WS + +++ ++D +++ + LV
Sbjct: 1 MWGIAPIYFKAISEVSPFEILSHRVVWSFV-LLAVLLHVGRRWRGVRDVIRSKTKMLFLV 59
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
++ ++ V+W FI+A+ S Y++ P+I+V LG +FL ERL LQ A L
Sbjct: 60 STSLLVGVNWLIFIWAVNANHMLDASLGYYINPLINVLLGMLFLGERLRKLQWFAVALAA 119
Query: 156 LSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+++ + G +P +++A+A+T+ Y RK + + + G FIE V+ A Y++W
Sbjct: 120 CGVMVQLIAFGSVPTVAIALALTFGFYGLLRKKVSLDAQTGLFIETLVMLPAAAVYLLWI 179
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S F + L LI G++ + F+ R KLST+G +Y P LM + +
Sbjct: 180 ADSPTSDFSANPMNLNLLLISAGVITTLPLLCFTGAATRLKLSTLGFFQYIGPSLMFLLA 239
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V + + T + I F + A+VV+ + S +++
Sbjct: 240 VLVYGEAFTTDKAITFAFIWGALVVFSFDGLKTSKQSRK 278
>gi|294142826|ref|YP_003558804.1| rarD protein [Shewanella violacea DSS12]
gi|293329295|dbj|BAJ04026.1| rarD protein [Shewanella violacea DSS12]
Length = 298
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 149/295 (50%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F CAY +WG TPLY + L QVS E++ HRV+WS V ++ F G S
Sbjct: 4 SEYRKGIVFAICAYTIWGFTPLYFKLLGQVSASEILIHRVIWSFVFVTILMMAFGG-FSR 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ LK+PK + +L +++++A +W FI+A+ S YF+ P+++V LG FL
Sbjct: 63 LRQVLKSPKQLMVLALTSSLIAANWLLFIWAINNDHMLDASLGYFINPLVNVILGMAFLG 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ A L +++ + G IPL+SL +A+++ Y RK + V + G +E
Sbjct: 123 ERLRKLQWFAVALAASGVMVQLISFGSIPLVSLGLALSFGFYGLLRKKVNVDAKTGLLVE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L AL Y+ N + + L L G++ + F+ R LS +
Sbjct: 183 TAILFPIALIYLFANVGGALTNMMTNELSFNLLLFAAGIVTTIPLLFFAASAVRVPLSVL 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G +Y P +M + +V + + D + + F + A+VV+ + + K++ K
Sbjct: 243 GFFQYLGPSIMFILAVTLYGESFDMEKGVTFMFIWGALVVFTIDMLYKRKKSELK 297
>gi|153009935|ref|YP_001371150.1| transporter DMT superfamily protein [Ochrobactrum anthropi ATCC
49188]
gi|151561823|gb|ABS15321.1| RarD protein, DMT superfamily transporter [Ochrobactrum anthropi
ATCC 49188]
Length = 325
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 81/310 (26%), Positives = 160/310 (51%), Gaps = 6/310 (1%)
Query: 10 YSKGLSKENASLPTM----MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLP 65
+G+S + + + G L AY LWG P Y + L + +EV+SHRV+WS+P
Sbjct: 16 EERGMSDQTITDTRLSDGSRGFLMALAAYGLWGALPFYLKALGHIPAMEVVSHRVIWSVP 75
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
++ +L + + + + ++W +++A+ Q + Y+
Sbjct: 76 VALLLLLALGQFKGILSAVRQPRMLAMAALTAGL-ITINWSIYVWAVAHDQVMGAALGYY 134
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFA 184
+ P+ +V LG +FL ERL +Q +A L +++++T++ G+P +SLA+ +T+ Y F
Sbjct: 135 INPLFNVVLGGLFLGERLTRVQYVAVGLAFAAVILLTVNAGGLPWVSLALPLTFGLYGFF 194
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
RK++P+ +GF +E+ +L IPAL YV+W +G +HF G + L+ G +
Sbjct: 195 RKSLPMPPLQGFTLEVLILCIPALGYVLWLAANGQDHFSTGPAFNVTMLLLAGPFTAIPL 254
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++ G K + +T+G+M+Y P ++ ++FI +P T + F ++ + +Y
Sbjct: 255 ILYAGGAKLLRYTTLGLMQYMTPTMLFFFAIFIFHEPFSTAQLGAFALIWAGLALYTWSM 314
Query: 305 VINSGKNKTK 314
++ + + K
Sbjct: 315 LVEHRRGRVK 324
>gi|229162390|ref|ZP_04290353.1| chloramphenicol-sensitive RarD protein [Bacillus cereus R309803]
gi|228621074|gb|EEK77937.1| chloramphenicol-sensitive RarD protein [Bacillus cereus R309803]
Length = 324
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 80/305 (26%), Positives = 156/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-- 71
+ + A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 12 MGSQTAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGV 69
Query: 72 -VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
F + + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 70 TKRFRQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLI 129
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L L ++I+T+ G IP +SL++A ++ Y +K +
Sbjct: 130 SILLGTVVLKEKLNFWQYVAVGLAGLGVIILTVRFGSIPWVSLSLAFSFGLYGLTKKLLN 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ AL Y+V G G F ++ TL LIG G++ + F+
Sbjct: 190 YDATIGLTMETMLVTPFALIYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAK 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + + I F + +A+ V+ +
Sbjct: 250 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWVALFVFSVAKTKFLV 309
Query: 310 KNKTK 314
+ + K
Sbjct: 310 QKQPK 314
>gi|260221826|emb|CBA30777.1| Uncharacterized transporter PA0485 [Curvibacter putative symbiont
of Hydra magnipapillata]
Length = 334
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 89/310 (28%), Positives = 154/310 (49%), Gaps = 2/310 (0%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL 64
A E + S +G L+ AY+ WG+ P+Y + L + LEV+ HR +W +
Sbjct: 25 ADPNEKFRNDFATTQSNFMQLGVLYSTLAYLAWGLFPIYFKQLSVIPALEVVMHRTVWCM 84
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
+ A++ + L + PK +G SA +L ++W +++A+ S Y
Sbjct: 85 V-LLLAVLAVRRQWAWLGAVWRTPKVMGAFALSAVLLGINWLVYVWAVQNGHVLDASLGY 143
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCF 183
F+ P+++V LG VFL ER Q +A + +L + L SG P ++L +AVT+ Y
Sbjct: 144 FILPLVNVGLGFVFLHERPRPGQWLAVAVAAAGVLWLALLSGHVPWVALVLAVTFGFYGL 203
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
RK +G+ EG +E VLA A ++W G G G+ D +L+ G +
Sbjct: 204 LRKVGALGALEGLTLETLVLAPFAGGLLLWWGLHGQGALVQGSAADIGWLLLAGPFTAVP 263
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+F+ G +R ++T+GI++Y +P L ++ V++ +P + R I F ++ A+VVY L
Sbjct: 264 LLLFAAGARRVSMATMGILQYISPSLQLLIGVWLYGEPFASARAIGFCLIWAALVVYSLE 323
Query: 304 TVINSGKNKT 313
S ++
Sbjct: 324 GWWFSRRSAA 333
>gi|109900379|ref|YP_663634.1| transporter DMT superfamily protein [Pseudoalteromonas atlantica
T6c]
gi|109702660|gb|ABG42580.1| RarD protein, DMT superfamily transporter [Pseudoalteromonas
atlantica T6c]
Length = 306
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 1/289 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G LF AY +WGI P+Y + L QV +E++ HR++WS+ + +V +K +
Sbjct: 9 GVLFAIAAYTMWGIAPMYFKLLGQVPAMEILMHRIIWSVIVLTLLVVVTGKADK-VKQAI 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
NPK + +L+ S +LA +W FI+A+ S Y++ P+++VFLG +FL ERL
Sbjct: 68 LNPKVMQVLLISGVLLAANWFIFIWAINNNHLLDASLGYYINPLLNVFLGRLFLGERLRR 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
LQ +A L + ++ + G + S + V +
Sbjct: 128 LQKVAVGLALSGVVYFIIGYGQLPWVALALAGTFGIYGLLRKQVAVDSLPGLLIESVFLL 187
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ ++ + LI G++ + F+ KR ST+G +Y
Sbjct: 188 LPAIAYWIWFAGEYSNMVTNDMALNITLICAGIVTTAPLLCFTAAAKRIMFSTLGFFQYI 247
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P LM V + + +P+D + ++F V +A+ ++ ++ K +
Sbjct: 248 GPSLMFVLAAVVYGEPLDDNKIVMFAFVWLALGLFSYDSLRQYRKVRKA 296
>gi|229592996|ref|YP_002875115.1| hypothetical protein PFLU5621 [Pseudomonas fluorescens SBW25]
gi|229364862|emb|CAY52918.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 294
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY++WG+ PLY + + V E+I HRVLWS ++ +
Sbjct: 2 QAANPRKGYILGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGALLLMVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NPK + +L S +++A +W +++++ + + S Y++ P+++V LG +
Sbjct: 61 GWFRELRDNPKRLAILALSGSLIAGNWLTYVWSVNSGRMLEASLGYYINPLVNVVLGMLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L + + +P +SL +A+T+ Y RK PV + G
Sbjct: 121 LGERLRRLQWVAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L A+ ++++N + + + +L+ G + F+ + +
Sbjct: 181 VETWMLVPIAVAWLLFNPSAHSAQMVFWSTSEAWWLVAAGPVTLIPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G ++Y AP L+++ +V + + + F + +VVY + ++ K
Sbjct: 241 ALGFLQYVAPTLVLLEAVLLFGEHLAPSTLTAFAFIWAGLVVYSVDIWLSVRKR 294
>gi|168238407|ref|ZP_02663465.1| RarD protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737911|ref|YP_002116882.1| RarD protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194713413|gb|ACF92634.1| RarD protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197288735|gb|EDY28110.1| RarD protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 298
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 143/296 (48%), Gaps = 2/296 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFM-MALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G +Y P LM + +V + + + F + +A+ ++++ V + + K
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAVYTHRRPRMK 297
>gi|322613030|gb|EFY09981.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617382|gb|EFY14282.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625626|gb|EFY22448.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627049|gb|EFY23842.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322631235|gb|EFY27998.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322638268|gb|EFY34967.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642796|gb|EFY39383.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646962|gb|EFY43464.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650349|gb|EFY46762.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656360|gb|EFY52654.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657585|gb|EFY53855.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665996|gb|EFY62177.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666735|gb|EFY62912.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322671022|gb|EFY67152.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322679271|gb|EFY75323.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681675|gb|EFY77702.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322685998|gb|EFY81986.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323192624|gb|EFZ77852.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323196490|gb|EFZ81640.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203758|gb|EFZ88779.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323205367|gb|EFZ90341.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323210736|gb|EFZ95612.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215904|gb|EGA00637.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221397|gb|EGA05815.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227585|gb|EGA11741.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231770|gb|EGA15881.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236185|gb|EGA20262.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239578|gb|EGA23626.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323244326|gb|EGA28334.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249577|gb|EGA33489.1| putative chloramphenical resistance permease RarD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323250331|gb|EGA34217.1| putative chloramphenical resistance permease RarD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323256538|gb|EGA40269.1| putative chloramphenical resistance permease RarD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323259764|gb|EGA43397.1| RarD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265172|gb|EGA48670.1| putative chloramphenical resistance permease RarD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323268399|gb|EGA51871.1| putative chloramphenical resistance permease RarD [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 298
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 143/296 (48%), Gaps = 2/296 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G +Y P LM + +V + + + F + +A+ ++++ V + + K
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAVYTHRRPRMK 297
>gi|182436726|ref|YP_001824445.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465242|dbj|BAG19762.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 348
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 72/289 (24%), Positives = 144/289 (49%), Gaps = 2/289 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L+ AY +WG+ PL+ L+ +E+++HR++WSL GV + +
Sbjct: 4 KNEQRAGLLYGIGAYGMWGLVPLFWPLLKPSGAVEILAHRMVWSL-GVVAVALLVVRRWA 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +++ + +G++ +A ++V+WG +I+A+ S YF+ P++++ +G + L
Sbjct: 63 WIGELVRDRRKLGLISVAAATISVNWGLYIWAVNNGHVVEASLGYFINPLVTIAMGVLLL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL +Q A ++++L++ + G P +SL +A +++ Y +K + +G E
Sbjct: 123 GERLRPVQWAAVATGLVAVLVLAIGYGKPPWISLVLAFSFATYGLVKKKVGMGGLESLAA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E VL +PAL +++W +GG F G L G++ + F R LST
Sbjct: 183 ETAVLFVPALGFLLWLAATGGSTFTAGGAGHGFLLAATGIVTAVPLICFGAAAVRVPLST 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+G+++Y AP+ V + + R F +V +A+ + +
Sbjct: 243 LGLLQYLAPVFQFGLGVLYFDESMPPERWAGFALVWLALSLLTWDALRT 291
>gi|204930201|ref|ZP_03221178.1| RarD protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204320605|gb|EDZ05807.1| RarD protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 295
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +LV SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLVLSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|224826819|ref|ZP_03699919.1| RarD protein, DMT superfamily transporter [Lutiella nitroferrum
2002]
gi|224601039|gb|EEG07222.1| RarD protein, DMT superfamily transporter [Lutiella nitroferrum
2002]
Length = 301
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 81/299 (27%), Positives = 155/299 (51%), Gaps = 2/299 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++S T G LFVF A+++WG+ PLY + L V L+++ HR+ WS ++
Sbjct: 2 SSSHETGRGVLFVFGAFLIWGLFPLYWKPLHDVPALQILCHRIAWSALF-VALLLLVQRQ 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++ PK +G+ S+ +L+ +W +I+A+ + S YF+ P+I+V LG +
Sbjct: 61 WGWLVPFVREPKRLGIFALSSALLSTNWLIYIWAVNADRVLDASLGYFINPLINVLLGRL 120
Query: 138 FLKERLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL +Q A L L + + L P ++L + +++ Y RK P+ S G
Sbjct: 121 FLSERLVPVQKAAVGLAALGVLWLTILAGTPPWVALGLGLSFGCYGLLRKQAPLASLPGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E ++ AL ++W + G F + L G G++ + +F+ G +R KL
Sbjct: 181 ALETFLMLPLALGALLWFEWQGQGSFGHVDGLHDAMLAGAGVVTAIPLLLFAAGARRLKL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+TVG+++YT+P++ ++ ++ +P R + FG + + +Y +++ + ++ K
Sbjct: 241 ATVGVIQYTSPIMQLLLGAWLFHEPFGAGRLVGFGFIWAGLALYSGAGLLDYLRTRSVK 299
>gi|312963461|ref|ZP_07777943.1| chloramphenicol-sensitive protein RarD [Pseudomonas fluorescens
WH6]
gi|311282267|gb|EFQ60866.1| chloramphenicol-sensitive protein RarD [Pseudomonas fluorescens
WH6]
Length = 294
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY++WG+ PLY + + V E+I HRVLWS ++ +
Sbjct: 2 HAANPRKGYILGLSAYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGGLLLMVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ + +L S +++A +W +++++ T + S Y++ P+++V LG +
Sbjct: 61 GWFRELRDNPRRLAILALSGSLIAANWLTYVWSVNTGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L + + +P +SLA+A+T+ Y RK PV + G
Sbjct: 121 LGERLRRLQWVAVGLAAVGVAQQVWQVGSLPWVSLALALTFGFYGLIRKQAPVKALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L A+ ++++N + + + +L+ G + F+ + +
Sbjct: 181 VETWMLVPIAVAWLLFNPTAHSAQLEFWSTSEAWWLVAAGPVTLIPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G ++Y AP L+++ +V + + + + F + +VVY + + K
Sbjct: 241 ALGFLQYVAPTLVLLEAVLLFGEHLAPSTLLAFAFIWAGLVVYSVDAWLTVRKR 294
>gi|290958215|ref|YP_003489397.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260647741|emb|CBG70846.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 319
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/287 (27%), Positives = 144/287 (50%), Gaps = 2/287 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L F AY +WGI PL+ L+ +E+++HR++WSL V A++
Sbjct: 4 QSRGEHRTGLLNGFAAYGMWGIVPLFWPLLKPSGAVEILAHRMVWSLAVVGVALLVLRR- 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
S + L+ P+ + ++ +A ++ V+WG +I+A+ Q S YF+ P++++ +G +
Sbjct: 63 WSWAGELLRQPRKLALVAVAAAVITVNWGVYIWAVNAHQVVEASLGYFINPLVTIAIGVL 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
LKERL +Q A + ++L++T+ G P +SL +A +++ Y +K + +G E
Sbjct: 123 LLKERLRPVQWTAVGVGFAAVLVLTVGYGRPPWISLCLAFSFATYGLVKKKVNLGGVESL 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E + +PAL Y++W G F L L GL+ + F R L
Sbjct: 183 AAETAIQFLPALAYLLWLGSRQDATFGAHGTGHALLLAATGLVTALPLVCFGAAAIRVPL 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
ST+G+++Y AP+ + V ++ + R F +V +A+ +
Sbjct: 243 STLGLLQYLAPVFQFLLGVVYFREAMPPERWAGFALVWLALSLLTWD 289
>gi|89075726|ref|ZP_01162121.1| hypothetical membrane protein [Photobacterium sp. SKA34]
gi|89048589|gb|EAR54163.1| hypothetical membrane protein [Photobacterium sp. SKA34]
Length = 301
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 1/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + +++LWGI PLY QFL Q ++ E+++ R+++S+P + ++ L
Sbjct: 2 QSRRAGNMLAAFSFVLWGIIPLYYQFLPQANINELLALRIIFSVPVMLLVMLLLKQPLPN 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L + K+ M + I++V W F +A+ + S YF+ P+ ++ LG FLK
Sbjct: 62 VTELLADKKSFFMCGIAGCIMSVSWYAFTWAITHGEVLAASLGYFINPLFAIALGMFFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF-ARKTIPVGSSEGFFIE 199
E+L Q+IA +L IL + L G + ++ A +K I + IE
Sbjct: 122 EKLTKAQVIAVVLAILGIAYQVLQYGELPWLSLLMGSFFAIYGLTKKYIKYDALTSVTIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L A+ Y++ F+G L +G + F+ + R LS V
Sbjct: 182 AAILTPCAVIYMLCLYFTGDSVSLTSGTTTFLLYVGSAPVTVAPLIFFALALNRTSLSMV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+M+Y P L + +VF+ + D + I F ++ ++ L + N K K
Sbjct: 242 GLMQYIEPTLQFLLAVFLFGEVFDHTKAISFSLIWAGLIFCTLEALPNLFHKKRK 296
>gi|167553861|ref|ZP_02347605.1| RarD protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205321798|gb|EDZ09637.1| RarD protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 294
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPTDEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + K
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRKK 294
>gi|283787507|ref|YP_003367372.1| hypothetical protein ROD_39351 [Citrobacter rodentium ICC168]
gi|282950961|emb|CBG90638.1| putative membrane protein [Citrobacter rodentium ICC168]
Length = 298
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WG+ P Y + + V E+++HRV+WS + + S S
Sbjct: 3 AKQTRQGVLLALAAYFIWGVAPAYFKLIHYVPADEILTHRVIWSFFFMVALMSV-SRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K L+ PK V +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 GVKTLLQTPKKVFLLALSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLF 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNPMSLNLLLIAAGVVTTVPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ V + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAVYTQRRARK 296
>gi|150395943|ref|YP_001326410.1| transporter DMT superfamily protein [Sinorhizobium medicae WSM419]
gi|150027458|gb|ABR59575.1| RarD protein, DMT superfamily transporter [Sinorhizobium medicae
WSM419]
Length = 313
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/293 (29%), Positives = 166/293 (56%), Gaps = 3/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G F AY+LWG P + + + + EV++HR++WS+P +++ +K
Sbjct: 17 RGFAFALAAYLLWGFLPFFMKAVAHIPAAEVVAHRIVWSVPLAGLVLLWIGRT-QDVKVA 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L++P+ + M +A ++ V+WG +++A+ + T+ Y++ P+ S+FLG++ LKER N
Sbjct: 76 LRSPRVLMMATLTAGLITVNWGIYVWAIGAGRAIETALGYYINPLFSIFLGALLLKERPN 135
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q++A L +++ ++ G+P +SL + +W Y F RKT+PVG ++GFF+E+ +L
Sbjct: 136 PAQMVAIGLAAVAVGVLAFDAGGLPWVSLGLCFSWGFYAFFRKTLPVGPNQGFFLEVLLL 195
Query: 204 AIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+IPA + + G F ++ D L L+ G++ + I++ G K +LST+GIM
Sbjct: 196 SIPAAGYIIWLEAAGQGHFFGYTSMTDVLLLLACGVVTAVPLMIYANGAKLLRLSTIGIM 255
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y AP ++ + +VF+ +P T + + F ++ A+ +Y + S + +
Sbjct: 256 QYIAPTMIFLIAVFVFHEPFGTAKLVAFALIWAALFIYSGAMLQESRARRAAQ 308
>gi|197249897|ref|YP_002148880.1| RarD protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197213600|gb|ACH50997.1| RarD protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
Length = 294
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + K
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRKK 294
>gi|163751802|ref|ZP_02159018.1| rarD protein [Shewanella benthica KT99]
gi|161328287|gb|EDP99448.1| rarD protein [Shewanella benthica KT99]
Length = 294
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G F CAY LWG PLY + L QVS E++ HRV+WS V ++ F G S
Sbjct: 4 SEHSKGITFAICAYTLWGFAPLYFKLLGQVSATEILIHRVIWSFLFVTILMMVFGG-FSR 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ LK PK + +L ++ ++A +W FI+A+ S YF+ P+I+V LG VFL
Sbjct: 63 LRQVLKRPKQLMVLTLTSILIAANWLLFIWAINNNHMLDASLGYFINPLINVMLGMVFLG 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ A L +++ + G IPL+SL +A ++ Y RK + V + G +E
Sbjct: 123 ERLRKLQWFAVALAASGVMVQLISFGSIPLVSLGLACSFGLYGLLRKKVNVDAKTGLLVE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L AL Y++ N + + L L+ G++ + F+ R LS +
Sbjct: 183 TAILFPVALIYLLTNMGGSLTNMMTNEMSFNLLLLAAGIVTTIPLLCFAAAAVRIPLSVL 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G ++Y P +M + +V + + D + I F + A++V+ + + K
Sbjct: 243 GFIQYLGPSIMFILAVTLYGESFDLEKGITFLFIWGALLVFTIDMLYKRKK 293
>gi|163760561|ref|ZP_02167642.1| hypothetical protein HPDFL43_11721 [Hoeflea phototrophica DFL-43]
gi|162282176|gb|EDQ32466.1| hypothetical protein HPDFL43_11721 [Hoeflea phototrophica DFL-43]
Length = 324
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 173/299 (57%), Gaps = 2/299 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A T G F AY+LWG P Y + + + LEV++HRV+WS+P +++
Sbjct: 22 ADEDTPRGFAFALAAYLLWGFMPFYMKAVAHIPALEVVAHRVVWSVPIAAVVLIWLGRT- 80
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ ++P+ +GM + +A ++ V+W +++++ + T+ Y++ P+ S+FLG+V
Sbjct: 81 QDIRAAFRSPRTMGMALITAALITVNWSIYVWSIGAGRAIETALGYYINPLFSIFLGAVL 140
Query: 139 LKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE L+ Q A L I+++ ++ G+P +S+ +A+TW Y F +K++PVG ++GFF
Sbjct: 141 LKESLDGRQKAAIALAIVAVALLAYESGGVPWVSVGLALTWGFYAFFKKSLPVGPNQGFF 200
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E+ +L PA+ ++++ +G HF + D + L+G GL+ + I++ G K +LS
Sbjct: 201 LEVLILTPPAIGFILYAQMAGIGHFGGTGMVDVMLLLGCGLVTAVPLMIYANGAKLLRLS 260
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
T+GIM+Y AP ++ V +VFI K+P + F ++ A+ +Y + + + ++
Sbjct: 261 TIGIMQYIAPTMIFVIAVFIFKEPFGPYKMAAFVLIWTALAIYSSSLLRSRKIRRAAEA 319
>gi|70725238|ref|YP_252152.1| hypothetical protein SH0237 [Staphylococcus haemolyticus JCSC1435]
gi|68445962|dbj|BAE03546.1| rarD [Staphylococcus haemolyticus JCSC1435]
Length = 301
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/299 (22%), Positives = 138/299 (46%), Gaps = 4/299 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG- 76
N++ G L+ AY++WGI P+Y + + VS E++++R++ S+ + IV
Sbjct: 2 NSNTEFKKGILYALGAYVVWGILPIYWKLIGGVSAFEILAYRIVLSMIFMILMIVVLKKS 61
Query: 77 --GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
LK +P + +++ + ++ ++WG FI+A+ +S Y++ P++S+ L
Sbjct: 62 QTFKRDLKHLFSHPIELIVIIIAGYVITINWGTFIWAVSNGHVLQSSLGYYINPLVSILL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FLKER N + +A + + +L MT+ G +++ + +S + V
Sbjct: 122 AFIFLKERFNKFETLAIIFATIGVLYMTIRVG-EFPVISLMLAFSFGIYGLLKKIVKIEA 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I + + + +G DT +L+ G + + +FS G KR
Sbjct: 181 ISSIAIECIVTAPAGLIYMIYLWNTGTSSVGLNMDTFWLMFSGAVTAIPLILFSAGAKRI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS G ++Y P +M +F K+ D + + F ++ I +V+Y + + +N
Sbjct: 241 PLSLTGFIQYVGPTIMFFLGIFAFKEHFDAQQLVTFALIWIGIVLYSISQYVKMKRNPR 299
>gi|302334311|gb|ADL24504.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 305
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/303 (26%), Positives = 144/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++++ E+++ R+++S + F +
Sbjct: 1 MNTEYKKGIFLALSAYILWGILPIYWQFVDEIGAFEILAFRIIFSAIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A + YV++ F L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGIIYVIYLWQQHQMSFGFNMSSFWLLFSGAIT--AVPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|24375727|ref|NP_719770.1| rarD protein [Shewanella oneidensis MR-1]
gi|24350664|gb|AAN57214.1|AE015857_7 rarD protein [Shewanella oneidensis MR-1]
Length = 294
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 141/287 (49%), Gaps = 2/287 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L AY +WG PLY + L VS E++ HRV+WS + +++ G L+
Sbjct: 7 RKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGG-FGKLRQ 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG +FL ERL
Sbjct: 66 LFKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LQ A L +LI + G IP++SLA+A T+ Y RK + V + G +E +
Sbjct: 126 RKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLLVETAI 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL Y+V S + + L L+ G++ + F+ R LS +G
Sbjct: 186 LLPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSMLGFF 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+Y P +M + +V + +P D ++I FG + A++V+
Sbjct: 246 QYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFDMAYKRK 292
>gi|269138521|ref|YP_003295221.1| putative integral membrane protein [Edwardsiella tarda EIB202]
gi|267984181|gb|ACY84010.1| putative integral membrane protein [Edwardsiella tarda EIB202]
gi|304558542|gb|ADM41206.1| Putative integral membrane protein [Edwardsiella tarda FL6-60]
Length = 314
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 2/291 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L ++ILWGITPLY + L + E+++ R+ WS+P + + F + +
Sbjct: 4 RNGPLLAVLSFILWGITPLYYKLLNDANAFELLAQRLFWSVPLLLALRLLFKQ-RTSWRA 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ +++ + I++V W FIYAL S YF P+ ++ LG +FL +RL
Sbjct: 63 AWQDKRSLYCCLLGGAIMSVSWTTFIYALTHHLVLDASLGYFTNPLFAIALGVIFLHDRL 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q IA LL I+ L + G P+L+L + +T++ Y RK I +E
Sbjct: 123 TRFQRIAVLLAIIGLTYQIILLGRVPVLALVMGITFAFYGLVRKYIRYDIMTSLTLETVW 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ AL +W +GG ++ + I + +F+ IKR L+ VG+
Sbjct: 183 MLPLALGITLWLQINGGSDLGGLSLSEYSLYILTAPVTYAPLLLFAAAIKRTSLTVVGLA 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+Y P L + +V +PI+ + I F ++ + + + + ++
Sbjct: 243 QYVEPSLQFLLAVLAFGEPINLPKMISFSLIWLGLALCIYELFRRPRRHSA 293
>gi|16762179|ref|NP_457796.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143668|ref|NP_807010.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161543|ref|ZP_03347253.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213425417|ref|ZP_03358167.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213649570|ref|ZP_03379623.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852515|ref|ZP_03382047.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289809705|ref|ZP_06540334.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|289828695|ref|ZP_06546490.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|24212190|sp|Q8Z3B1|RARD_SALTI RecName: Full=Protein rarD
gi|25303480|pir||AC0918 chloramphenicol-sensitive protein RarD [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504482|emb|CAD07937.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139303|gb|AAO70870.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 294
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFSIADSATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + K
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRKK 294
>gi|161617075|ref|YP_001591040.1| hypothetical protein SPAB_04908 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161366439|gb|ABX70207.1| hypothetical protein SPAB_04908 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 295
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAAMRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|83941760|ref|ZP_00954222.1| RarD [Sulfitobacter sp. EE-36]
gi|83847580|gb|EAP85455.1| RarD [Sulfitobacter sp. EE-36]
Length = 308
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 89/304 (29%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPG 66
+ + ++ T G F AY LWG PLY + + + E++ HRV+WS+P
Sbjct: 2 RNPDTLSNTQPAPPEDTPQGLAFAIGAYGLWGFLPLYMKAIAHIPAAEIVVHRVIWSVPV 61
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
++ + L++ ++P+ + M +AT+++V+WG +I+A+ + + Y++
Sbjct: 62 GALVLILLGRT-ATLREAFRSPRTLAMGCVTATLISVNWGIYIWAVNSGHALDAALGYYI 120
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFAR 185
P+ S+ LG++ L ERL+ LQ+ A L +++ I+TL SG P ++L++ T+ Y A+
Sbjct: 121 NPLFSILLGALLLGERLSRLQLAALGLAAVAVAILTLDSGRFPWVALSLTFTFGLYALAK 180
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
K +P+G ++GF +E+ +L PAL Y+V+ +G HF G +T L+G G++ +
Sbjct: 181 KRLPIGPNQGFLLEVLILLAPALAYLVYLIMTGQNHFGQGVPFNTWMLVGCGVVTAVPLI 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ G KR +LST+GI++Y AP ++++ + + +P R I F ++ A+V+Y +
Sbjct: 241 FYANGAKRLRLSTIGILQYIAPTMILLCAALVFDEPFGRARMIAFPLIWGALVIYSISLF 300
Query: 306 INSG 309
Sbjct: 301 RQMR 304
>gi|261343072|ref|ZP_05970930.1| protein RarD [Enterobacter cancerogenus ATCC 35316]
gi|288314637|gb|EFC53575.1| protein RarD [Enterobacter cancerogenus ATCC 35316]
Length = 298
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/295 (26%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y +F+ V E+++HRV+WS + A++ S S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKFIHYVPADEILTHRVIWSFFFM-IALMSVSRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK V +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 GVKTLLKTPKKVFLLALSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L +L+ G P+++L +A +++ Y RK I V + G
Sbjct: 122 GERFRRMQWVAVILAFCGVLVQLWTFGSLPVIALGLAFSFAFYGLVRKKIAVEAQTGMLF 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSATSHMGNNPWTLNVLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ +++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVVFYGEVPGADKMVTFAFIWVALAIFVADAIYTQRRVRK 296
>gi|152964624|ref|YP_001360408.1| RarD protein, DMT superfamily transporter [Kineococcus
radiotolerans SRS30216]
gi|151359141|gb|ABS02144.1| RarD protein, DMT superfamily transporter [Kineococcus
radiotolerans SRS30216]
Length = 336
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 6/306 (1%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFF 69
++ T G L Y LWG+ P Y L +E+++ RV+WSL
Sbjct: 25 DARRTESPPGGHATRTGILAGLACYGLWGLFPFYFHALLPTGAVELLAWRVVWSLVLSVL 84
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ + + L++P G+L +A +AV+WG + A++T S YFV P+
Sbjct: 85 VVTATRR-WARVLTVLRSPAQRGLLALAAVAIAVNWGVYGLAVVTGHVLEASLGYFVNPL 143
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
++V LG V L+ERL Q +A + + +++++T G K
Sbjct: 144 LTVLLGVVVLRERLRPTQWVAVAIGLGAVVVITADLGRLPWMALTLAASFGSYGLLKNRL 203
Query: 190 VGSSEGFF----IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
G + + + F T L+ G
Sbjct: 204 ARRGAGVDPLTGLTVETGFLLLPAVAALAVLGDRLTFTGYGGGHTALLVLAGPTTLLPLL 263
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+F+ R LS +G+++Y P+L + +L + + R I FG+V +A+ V +
Sbjct: 264 LFAVAAGRVPLSVIGMLQYLTPVLQFG-AALVLGETMPASRWIGFGLVWVALAVLTADAL 322
Query: 306 INSGKN 311
+ +
Sbjct: 323 RHQRRR 328
>gi|127514404|ref|YP_001095601.1| transporter DMT superfamily protein [Shewanella loihica PV-4]
gi|126639699|gb|ABO25342.1| RarD protein, DMT superfamily transporter [Shewanella loihica PV-4]
Length = 295
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 4/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A + G CAY LWG PLY + L VS E++ HRV+WS + + + G
Sbjct: 2 ADIEYRKGVALAICAYCLWGFAPLYFKLLNHVSATEILLHRVIWSFVFMLILMQFIGG-F 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L+ + PK +G+L ++ ++A +W FI+A+ S YF+ P+I+V LG VF
Sbjct: 61 AKLRALFRQPKQLGVLALTSVLIAGNWLLFIWAINNDHMLDASLGYFINPLINVLLGMVF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ERL LQ A L +LI + G IP++SL +A ++ Y RK + + + G
Sbjct: 121 LQERLRKLQWAAVSLACAGVLIQLISFGSIPVVSLGLAASFGVYGLLRKKVNIDAKTGLL 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL Y+ N + L L+ G++ S F+ R LS
Sbjct: 181 VETAILVPVALLYLAMNL--DDTSILENSWQMNLLLMAAGIVTSIPLLCFAGAATRIPLS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P +M + +V + +P D + I F + A+V++ L + S + +T
Sbjct: 239 MLGFFQYIGPSIMFIMAVSLFNEPFDLEKGITFAFIWSALVIFTLDLALKSRRKQT 294
>gi|229104088|ref|ZP_04234762.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock3-28]
gi|228679295|gb|EEL33498.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock3-28]
Length = 313
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 77/305 (25%), Positives = 156/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLAV 58
Query: 74 FSGGLSLLKDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFVGEFVNLFKRPKLLMSLTIASILISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTIRFGSIPWVSLSLAFSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ AL Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFALIYLVMTGVHGFGSFGAISMLSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + + + F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMMAFFCIWVALFVFSIAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|329915332|ref|ZP_08276244.1| Protein rarD [Oxalobacteraceae bacterium IMCC9480]
gi|327544940|gb|EGF30284.1| Protein rarD [Oxalobacteraceae bacterium IMCC9480]
Length = 299
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 2/292 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G LF AY++WG+ PLY + L+ ++ +++ HR++WSL + + + S L D
Sbjct: 2 RKGMLFAATAYVIWGLLPLYFKALQSIAPTQIMLHRMVWSLLFLLCVL-AWRRQWSWLAD 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ PK + + SA +L+ +W +I+A+ + +S YF+ P+++V LG V L ERL
Sbjct: 61 AVRQPKVLATFLLSAVLLSTNWFTYIWAVNNGRIIDSSLGYFINPLVNVLLGYVVLGERL 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+Q +A L + +T +G P + L +A+++ Y RKT +G EG +E +
Sbjct: 121 RGVQWLAVALAAGGVAWLTWITGQPPWIGLTLALSFGFYGLMRKTAALGPLEGLSLETLL 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL + W F L+ G + + +F+ G +R ++T+G++
Sbjct: 181 LFPFALAALAWLTLHQQNAFLDAPTQSQWLLMAAGPITAVPLLLFAAGARRIPMATLGLL 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+Y P L + V + + R I F + A+VVY +V + +N++
Sbjct: 241 QYIGPSLQLALGVLLYNESFSGDRLIGFAAIWSALVVYSGESVWRAWRNRSA 292
>gi|114564974|ref|YP_752488.1| transporter DMT superfamily protein [Shewanella frigidimarina NCIMB
400]
gi|114336267|gb|ABI73649.1| RarD protein, DMT superfamily transporter [Shewanella frigidimarina
NCIMB 400]
Length = 302
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L CAY +WG+ PLY + L V E++ HRV+WS + + + G S L+
Sbjct: 7 RKGVLLAICAYTIWGVAPLYFKLLHHVPATEILMHRVIWSFIFMVILMQFIGG-FSRLRL 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
LK PK + +L+ ++ ++A +W FI+A+ S YF+ P+ +V LG VFL ERL
Sbjct: 66 ILKQPKQLLILLITSVLIAANWLLFIWAVNNDHMLDASLGYFINPLFNVLLGMVFLGERL 125
Query: 144 NHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LQ +A L + +L+ + IPL+SLA+A ++ Y RK + + + G +E +
Sbjct: 126 RKLQWVAVALASIGVLVQLVSFGSIPLVSLALAASFGFYGLLRKKVNIDAKSGLLVETAI 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL Y+ S + L L+ G++ + F+ R S +G
Sbjct: 186 LLPIALGYLFITLDSSTTSMLTNTLDLNLLLVAAGIVTTIPLLCFAGSAVRIPFSILGFF 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+Y P +M + +V + +P D + I FG + A+V+++ + +
Sbjct: 246 QYIGPSIMFILAVKLFNEPFDIEKGITFGFIWGALVIFVGDMTLQRQRR 294
>gi|325964263|ref|YP_004242169.1| rarD protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323470350|gb|ADX74035.1| rarD protein [Arthrobacter phenanthrenivorans Sphe3]
Length = 337
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 80/302 (26%), Positives = 138/302 (45%), Gaps = 4/302 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T G LF AY LWG+ PLY L +E++++RV+WSL I
Sbjct: 27 KAVDKETTAGILFGIGAYGLWGLLPLYFFVLMPAGAVEIVANRVVWSLLFCALLITVTR- 85
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
S L L+N G L +A ++AV+W + Y + T Q S YF+ P++SV LG
Sbjct: 86 AWSALAAALRNRAVFGTLALAALLIAVNWLTYTYGVTTGQAVEASLGYFINPLVSVLLGV 145
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSS 193
LKE+L LQ A + +++ ++T G A++ + R V +
Sbjct: 146 FVLKEKLRPLQWTAVGIGFVAVGVLTYSYGKLPWIALTLALSFGLYGFVKKRVGPRVDAV 205
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+E VLA A +V+ +G L+ G++ + F +R
Sbjct: 206 TSLTVESMVLAPFAAATMVYLAAAGTATLTTQGPGHFWLLLASGVITAVPLLFFGASARR 265
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L+T+G+++Y AP+L + ++ + ++ + R I FG+V IA++V + + + K
Sbjct: 266 LPLTTIGLLQYFAPVLQFILALVVFREAMTLDRWIGFGVVWIALLVLTVDMLRTARKTSV 325
Query: 314 KK 315
+
Sbjct: 326 AR 327
>gi|332534727|ref|ZP_08410555.1| uncharacterized transport protein [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035814|gb|EGI72298.1| uncharacterized transport protein [Pseudoalteromonas haloplanktis
ANT/505]
Length = 305
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 2/298 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G +F A+++WG+ P+Y + ++ VS E++ HRV+W +V
Sbjct: 2 SIDTEQRKGAIFACLAFLMWGLAPIYFKLIQHVSAFEILMHRVIW-SVVFLVLVVSVLRY 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+K + PK + MLV ++ +L +WG FI+A+ S Y++ P+++V LG +
Sbjct: 61 WGKIKRIIVQPKLLLMLVITSALLGFNWGLFIWAINNNHMLDASLGYYINPLLNVLLGML 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL Q +A L +++ + G P+++ ++A++++ Y RK +PV + G
Sbjct: 121 FLGERLRKFQGVAVALAFSGVVLQLISFGSFPVVAFSLAISFALYGLLRKKLPVEALPGI 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E +L AL Y + + LI G++ + F+ KR +
Sbjct: 181 LLEALILLPVALIYWWLMVPTATSSLPANDWHTNALLISAGIVTTLPLLCFTGAAKRLQY 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+T+G +Y P LM + +V + D R + F + A+ ++ + S K K
Sbjct: 241 TTLGFFQYIGPSLMFILAVVFYGEVFDAERVVTFACIWSALAIFSWDSYHQSRKRKKA 298
>gi|254486450|ref|ZP_05099655.1| RarD protein [Roseobacter sp. GAI101]
gi|214043319|gb|EEB83957.1| RarD protein [Roseobacter sp. GAI101]
Length = 306
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 90/304 (29%), Positives = 172/304 (56%), Gaps = 2/304 (0%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPG 66
+ + ++ S T G F AY++WG PLY + + + E++ HR++WS+P
Sbjct: 2 RNPDTLSADQQTKSEDTPQGLGFAVGAYVMWGFLPLYMKAMAHIPAAEIVVHRIIWSVPV 61
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
++ + L++ L++P+ + M +A +++V+WG +I+A+ + S Y++
Sbjct: 62 GALVLILLGRT-ATLREALRSPRTLLMGCVTAGLISVNWGIYIWAVNSGHALDASLGYYI 120
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFAR 185
P+ S+ L SV L ERL+ LQ+ A L +++ I+T+ SG P ++L++ +T+ Y A+
Sbjct: 121 NPLFSILLASVLLGERLSKLQMAAIALAAVAVAILTVESGKFPWVALSLTLTFGLYALAK 180
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
K +P+G ++GF +E+ +L +PAL Y+ + +G HF G DT L+G G++ +
Sbjct: 181 KRLPIGPNQGFLLEVLILLVPALVYLGYLSATGQTHFAQGVWFDTWMLVGCGIVTAVPLI 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ G KR +LST+GI++Y AP ++ + +V + +P R I F ++ A+V+Y +
Sbjct: 241 FYANGAKRLRLSTIGILQYIAPTMIFLCAVLVFDEPFGHARMIAFPLIWAALVIYSISLF 300
Query: 306 INSG 309
Sbjct: 301 QQMR 304
>gi|120597201|ref|YP_961775.1| transporter DMT superfamily protein [Shewanella sp. W3-18-1]
gi|146291574|ref|YP_001181998.1| transporter DMT superfamily protein [Shewanella putrefaciens CN-32]
gi|120557294|gb|ABM23221.1| RarD protein, DMT superfamily transporter [Shewanella sp. W3-18-1]
gi|145563264|gb|ABP74199.1| RarD protein, DMT superfamily transporter [Shewanella putrefaciens
CN-32]
gi|319424747|gb|ADV52821.1| RarD protein, DMT superfamily transporter [Shewanella putrefaciens
200]
Length = 294
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 2/290 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L AY +WG PLY + L VS E++ HRV+WS + + + G S
Sbjct: 4 REYRKGILLAVSAYCMWGFAPLYFKLLNHVSATEILLHRVIWSFVFMLIIMQFIGG-FSR 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ K PK + +LV ++ ++A +W FI+A+ S YF+ P+++V LG +FL
Sbjct: 63 LRLLFKQPKQLIVLVITSILIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLG 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ A L +LI + G IP++SLA+A T+ Y RK + V + G +E
Sbjct: 123 ERLRKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGFYALLRKKVNVDAKAGLLVE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL AL Y+V + + L L+ G++ + F+ R LS +
Sbjct: 183 TAVLLPVALVYLVATLDTATASMLTNDWQLNLMLMAAGIVTTIPLLCFAGAAVRIPLSML 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G +Y P +M + +V + +P D + + FG + A++V+ L
Sbjct: 243 GFFQYIGPSIMFILAVSLFNEPFDAEKGVTFGFIWSALLVFTLDMAYKRK 292
>gi|159898185|ref|YP_001544432.1| transporter DMT superfamily protein [Herpetosiphon aurantiacus ATCC
23779]
gi|159891224|gb|ABX04304.1| RarD protein, DMT superfamily transporter [Herpetosiphon
aurantiacus ATCC 23779]
Length = 297
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 84/288 (29%), Positives = 150/288 (52%), Gaps = 2/288 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L+ AY WG PLY + L + LE+++HR+ WSL +V G +
Sbjct: 2 KRGILYAAGAYACWGFFPLYWKLLNGIPALEILAHRMAWSLVF-VGLLVVLRGQMGQFLQ 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L+N + V + SA +L ++W +I+A+ +S YF+ P+++V LG +FL ER+
Sbjct: 61 VLRNRRTVLIYATSAFLLGINWYVYIWAVNANHVVESSLGYFINPLVNVALGMLFLGERV 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q +A L + ++ +T+ G+ P ++LA+A T+ Y RKT + S +G +E V
Sbjct: 121 RRWQAMAIGLATIGVVYLTVALGVLPWIALALAFTFGFYGLIRKTAALDSLQGLALETVV 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
PA Y++W G F + +L L G G++ + +F+ G ++ ++T+G++
Sbjct: 181 FFGPAAGYLLWLETQGKAAFGHQSWTVSLILAGAGIVTAIPLLMFAAGARQIPMTTLGLL 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+Y P + V + +PI + I F I+ IA+ +Y + +N G+
Sbjct: 241 QYINPTMQFSLGVLLYHEPISGTKLIGFAIIWIALALYSFESYLNRGQ 288
>gi|163941182|ref|YP_001646066.1| transporter DMT superfamily protein [Bacillus weihenstephanensis
KBAB4]
gi|229012750|ref|ZP_04169920.1| chloramphenicol-sensitive RarD protein [Bacillus mycoides DSM 2048]
gi|229061138|ref|ZP_04198489.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH603]
gi|229134380|ref|ZP_04263193.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BDRD-ST196]
gi|229168295|ref|ZP_04296020.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH621]
gi|163863379|gb|ABY44438.1| RarD protein, DMT superfamily transporter [Bacillus
weihenstephanensis KBAB4]
gi|228615121|gb|EEK72221.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH621]
gi|228649001|gb|EEL05023.1| chloramphenicol-sensitive RarD protein [Bacillus cereus BDRD-ST196]
gi|228718221|gb|EEL69859.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH603]
gi|228748585|gb|EEL98440.1| chloramphenicol-sensitive RarD protein [Bacillus mycoides DSM 2048]
Length = 313
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 76/301 (25%), Positives = 150/301 (49%), Gaps = 4/301 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G ++ AY +WG+ P+Y +++E+V E+++HR++W+ + +
Sbjct: 3 SQTAEQKQGIIYAAGAYTMWGVLPIYWKWVEEVPADEILAHRIVWAFVFMLLVLGVTKRF 62
Query: 78 LSL---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFGGELVALFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L L ++I+T+ G IP +SL++A ++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGLGVVILTIRFGSIPWVSLSLAFSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ AL Y+ G G F + T LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFALIYLFMTGVHGFGSFGSISAISTFLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L +G ++Y AP + ++ VF+ + + I F + IA+ V+ + + +
Sbjct: 243 IPLYMIGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWIALFVFSMAKTKFLLQKQP 302
Query: 314 K 314
K
Sbjct: 303 K 303
>gi|90578066|ref|ZP_01233877.1| hypothetical membrane protein [Vibrio angustum S14]
gi|90441152|gb|EAS66332.1| hypothetical membrane protein [Vibrio angustum S14]
Length = 301
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 1/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + +++LWGI PLY QFL Q ++ E+++ R+++S+P + ++ L
Sbjct: 2 QSRRAGNVLAAFSFVLWGILPLYYQFLPQANINELLALRLIFSVPVMLLVMLLLKRPLPN 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L + K+ M + I++V W F +A+ + S YF+ P+ ++ LG FL+
Sbjct: 62 VTELLADKKSFFMCGIAGCIMSVSWYAFTWAITHGEVLAASLGYFINPLFAIALGMFFLR 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF-ARKTIPVGSSEGFFIE 199
E+L Q+IA +L IL + G + ++ A +K I + IE
Sbjct: 122 EKLTKAQVIAVVLAILGIAYQVWQYGELPWLSLLMGSFFAIYGLTKKYIKYDALTSVTIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L A Y++W FSG L +G + F+ + R L+ V
Sbjct: 182 AAILTPFAAIYMLWLYFSGDSVSLTSGTSTFLLYVGSAPVTVAPLIFFALALNRTSLTMV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+M+Y P L + +VF+ + D + I F ++ ++ L + N K K
Sbjct: 242 GLMQYIEPTLQFLLAVFLFGEVFDHTKAISFSLIWAGLIFCTLEALPNLFHKKRK 296
>gi|85060318|ref|YP_456020.1| chloramphenicol-sensitive protein RarD [Sodalis glossinidius str.
'morsitans']
gi|84780838|dbj|BAE75615.1| chloramphenicol-sensitive protein RarD [Sodalis glossinidius str.
'morsitans']
Length = 298
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 76/294 (25%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L AY +WG+ P Y + + QV E+++HR+LWS+ + ++
Sbjct: 2 SDNSARQGVLCALGAYFIWGLAPAYFKLIAQVPANEILAHRILWSVVFM-LVLLTLGRRW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +L+ K + L ++ ++ +W FI+A+ S YF+ P+++V LG +F
Sbjct: 61 PQVRQSLRRGKLLLALALTSVLVGSNWLLFIWAVNHHHMLEASLGYFINPLVNVLLGMLF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER LQ +A +L +L+ G PL++L +A+T++ Y RKTI + + G
Sbjct: 121 LGERFRRLQWLAGMLAFAGVLVQLWMFGSLPLIALGLALTFALYGLLRKTIGIDAQTGML 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE L A +Y+ S H L L G+L + +F+ R +LS
Sbjct: 181 IETLWLMPAAAYYLFIVADSPTSHLGANGWHLNLLLASAGVLTTVPLLLFTTAANRLRLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G +Y P LM + +V + + + F + +A+ V++ ++ +
Sbjct: 241 TLGFFQYLGPTLMFLLAVGFYGEALSADKLYTFAFIWLALGVFITDALLTQRRR 294
>gi|229075453|ref|ZP_04208442.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock4-18]
gi|228707702|gb|EEL59886.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock4-18]
Length = 313
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 77/305 (25%), Positives = 156/305 (51%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLAV 58
Query: 74 FSGGLSLLKDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFVNLFKRPKLLMSLTIASILISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLAFSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ AL Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFALIYLVMTGVHGFGSFGAISMLSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + + + F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTSTHMMAFFCIWVALFVFSIAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|260432350|ref|ZP_05786321.1| RarD protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260416178|gb|EEX09437.1| RarD protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 361
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 71/295 (24%), Positives = 148/295 (50%), Gaps = 1/295 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + T G AY+LWG PLY + + + +E+++HR++WS+P ++
Sbjct: 65 TTCSQNADTPKGLALAVLAYVLWGFLPLYMKAMAHIGPVEIVAHRIIWSVPVAGLLLIAL 124
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
LK L++P +GM +A +++V+W +++A+ + + Y++ P+ S+ L
Sbjct: 125 GRT-GDLKAALRDPGMLGMACVTAALISVNWAIYVWAIASGNALDAALGYYINPLFSIAL 183
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G++ L+E L+ QI+A L L +L++ +G + + + K
Sbjct: 184 GAILLRESLSRTQIVAVGLAGLGVLVLIFEAGRLPWAALGLMVSWGFYAFFKRSLPIGPN 243
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F+ ++ + V + GE F + DTL L G G++ + +++ G K
Sbjct: 244 QGFLLEVLILLVPALAYVTWLGASGEGHFGLAVSDTLLLAGAGIVTAVPLLVYANGAKLV 303
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+LST+GI++Y AP ++ ++++ + + +D R I F ++ A++VY +P +
Sbjct: 304 RLSTMGILQYIAPTMIFITAIAVFGEQVDRGRMIAFPLIWAALIVYSVPMIRQVR 358
Score = 35.7 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 48/160 (30%)
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ + G+ L LA + + + +G E +
Sbjct: 57 WMPSMSASTTCSQNADTPKGLALAVLAYVLWGFLPLYMKAMAHIGPVEIVAHRIIWSVPV 116
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
A ++ G +G L + L S + I+ + I + Y
Sbjct: 117 AGLLLIALGRTGDLKAALRDPGMLGMACVTAALISVNWAIYVWAIASGNALDAALGYYIN 176
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
PL I +L++ + + + G+ + ++V +
Sbjct: 177 PLFSIALGAILLRESLSRTQIVAVGLAGLGVLVLIFEAGR 216
>gi|229018764|ref|ZP_04175613.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH1273]
gi|229025006|ref|ZP_04181435.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH1272]
gi|228736341|gb|EEL86907.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH1272]
gi|228742514|gb|EEL92665.1| chloramphenicol-sensitive RarD protein [Bacillus cereus AH1273]
Length = 313
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 77/305 (25%), Positives = 151/305 (49%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + A G ++ AY +WG+ P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQAAQQK--QGIIYAAGAYTMWGVLPIYWKWVEEVPADEILAHRIVWAFVFMLLVLGV 58
Query: 74 FSGGLSL---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
L K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFGGELVALFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L L ++I+T+ G IP +SL++A ++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGLGVVILTVRFGSIPWVSLSLAFSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ AL Y+ G G F + T LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFALIYLFMTGVHGFGSFGSISAISTFLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L +G ++Y AP + ++ VF+ + + I F + IA+ V+ +
Sbjct: 239 GAQLIPLYMIGFLQYIAPTISLILGVFVFGEHFTSTHMIAFFCIWIALFVFSMAKTKFLL 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|237727931|ref|ZP_04558412.1| transporter DMT superfamily protein [Citrobacter sp. 30_2]
gi|226910380|gb|EEH96298.1| transporter DMT superfamily protein [Citrobacter sp. 30_2]
Length = 297
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 2/296 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + ++ S S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-VLMSISRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K L+ PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 GVKTLLQTPKKIFLLALSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A LL +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVLLAACGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSSTSHMGQNPMSLNLLLIAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G +Y P LM + +V + T + + F + +A+ ++++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGTDKMVTFAFIWVALAIFVMDAIYTQRRVRRS 297
>gi|320539380|ref|ZP_08039049.1| putative chloramphenical resistance permease [Serratia symbiotica
str. Tucson]
gi|320030505|gb|EFW12515.1| putative chloramphenical resistance permease [Serratia symbiotica
str. Tucson]
Length = 329
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 22/293 (7%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G F AY++WGI P+Y + ++QV E+++HRV+WS ++ S
Sbjct: 57 AQQTRQGIFFALAAYLIWGIAPVYFKLIQQVPADEILTHRVIWSF-FFILLLISLSRNRP 115
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ T +N K + ML +A ++ +W +I+A+ S YF+ P+++V LG +F
Sbjct: 116 QVRTTCQNRKRLLMLAITALLIGGNWLLYIWAVNNHHMLEASLGYFINPLVNVLLGMLFF 175
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L L +LI G P++ L +A +++ Y RK I + + G I
Sbjct: 176 GERFRRMQWLAVALAFLGVLIQLWQFGSLPIIGLGLAFSFACYGLLRKKIGIDAQTGMLI 235
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ L+ G++ + F+ +LST
Sbjct: 236 ETLWLLPAAAVYL--------------------LLMATGIVTTVPLLFFTAAANHLRLST 275
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y A L+ + +V + + + + FG + A+V++ L + K
Sbjct: 276 LGFFQYLASTLVFLLAVTFYSETVGQDKLVTFGFIWAALVLFTLEALYTQRKR 328
>gi|207859155|ref|YP_002245806.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|206710958|emb|CAR35326.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
Length = 295
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVRADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|283457460|ref|YP_003362037.1| putative permease [Rothia mucilaginosa DY-18]
gi|283133452|dbj|BAI64217.1| predicted permease [Rothia mucilaginosa DY-18]
Length = 323
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 58/302 (19%), Positives = 128/302 (42%), Gaps = 4/302 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E T G + + YI+WG+ PLY + +E++ RV++SL +
Sbjct: 2 SETQKHTTRNGFIAIIGTYIIWGLLPLYFVLMAPAGPIEIVVARVVFSLIFCALLLPILR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + L++ + + +L ++ ++ +W ++ A + S YF+ P++SV LG
Sbjct: 62 VT-ADFRRALRDRRIMLVLTAASFLICANWLIYVMATTSGHTIDVSLGYFINPLVSVVLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGS 192
+FL ERL Q ++ + +++L+M+L G + AR V
Sbjct: 121 VIFLHERLRPAQWVSVAISCIAVLMMSLIYGQVPWTGLGVAFTFGIYGLLKARVAHDVSP 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+E +LA + ++ G F L G++ +F+ K
Sbjct: 181 IISLSLETFILAPFGVAALLMLNAQGQMTLFSEGPGHFWLLASTGVVTVVPLMLFAAATK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
LS +G+++Y P + V ++ +L + + + + ++ +A++++ + + S +
Sbjct: 241 ALPLSVIGMVQYLGPTIQFVLALTVLHEQMSADKVLGLSLIWVALIIFTVDALRASRAYR 300
Query: 313 TK 314
Sbjct: 301 AS 302
>gi|170724001|ref|YP_001751689.1| transporter DMT superfamily protein [Pseudomonas putida W619]
gi|169762004|gb|ACA75320.1| RarD protein, DMT superfamily transporter [Pseudomonas putida W619]
Length = 295
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ PLY + ++ V +E+I HRVLWS ++ +
Sbjct: 2 HAANPRRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ + +L S ++A +W +++++ + S Y++ P+++V LG +
Sbjct: 61 GWWRELRDNPRRLAILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A + + + +P +SL +A+T+ Y RK PV + G
Sbjct: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + + + L+LI G + F+ + +
Sbjct: 181 VETWMLVPLALGWLLLHPAAMSAQGSFYTGSEALWLIAAGPVTLIPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + + F + + +Y + +N K
Sbjct: 241 TLGFLQYLAPTLVLLQAVLLFDEHLSSSSLMAFLCIWAGLALYSVDAWLNLRKR 294
>gi|156977102|ref|YP_001448008.1| hypothetical protein VIBHAR_05888 [Vibrio harveyi ATCC BAA-1116]
gi|156528696|gb|ABU73781.1| hypothetical protein VIBHAR_05888 [Vibrio harveyi ATCC BAA-1116]
Length = 301
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 72/294 (24%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ G L ++++WG+ P+Y +FL S+ E+++ R++ S+P F ++ + +
Sbjct: 2 NNSLYGNLMAALSFVIWGLLPIYYRFLPNASMDELLALRIIGSVPVGFILVLAMTRHMPK 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ K++ +++++ + W F +AL + S +F+ P+ISV LG L
Sbjct: 62 WSKVWQDKKSLWYTFVASSLMCISWVAFTWALTNNRVIDASLGFFIGPLISVALGVFILG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++L+ Q IA LL + +L G PL++L + + +S Y +K I S FIE
Sbjct: 122 DKLSKGQFIAILLATIGVLYQVFQYGQLPLVALTMGLFFSLYGLFKKKINFDWSTTLFIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL AL Y++ + GE ++ + +G + +S ++ LSTV
Sbjct: 182 ALVLTPIALAYLIVKQVTVGELASTVDMTTFMLYLGSAPVTILPLIFYSIALRITNLSTV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G+M+Y P L V +V + D+V+ + F + + ++ + V K +
Sbjct: 242 GLMQYIEPSLQFVLAVVFFGELFDSVKAVTFAFIWVGLLFTIFEGVAKLSKRRK 295
>gi|229117021|ref|ZP_04246403.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock1-3]
gi|228666425|gb|EEL21885.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock1-3]
Length = 313
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 77/305 (25%), Positives = 155/305 (50%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLAV 58
Query: 74 FSGGLSLLKDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFVNLFKRPKLLMSLTIASILISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLAFSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ A Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTPFAFIYLVMTGVHGFGSFGAISMLSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + T + F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTTTHMMAFFCIWVALFVFSIAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|153832044|ref|ZP_01984711.1| RarD protein [Vibrio harveyi HY01]
gi|148871659|gb|EDL70500.1| RarD protein [Vibrio harveyi HY01]
Length = 301
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ G L ++++WG+ P+Y +FL S+ E+++ R++ S+P F ++ + +
Sbjct: 2 NNSLYGNLMAALSFVIWGLLPIYYRFLPNASMDELLALRIIGSVPVGFILVLAMTRHMPK 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ K++ +++++ + W F +AL + S +F+ P+ISV LG L
Sbjct: 62 WSKVWQDKKSLWYTFVASSLMCISWVAFTWALTNNRVIDASLGFFIGPLISVALGVFILG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++L+ Q IA LL + +L G PL++L + + +S Y +K I S FIE
Sbjct: 122 DKLSKGQFIAILLATIGVLYQVFQYGQLPLVALTMGLFFSLYGLFKKKINFDWSTTLFIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL AL Y++ + GE ++ + +G + +S I+ LSTV
Sbjct: 182 ALVLTPIALTYLIVKQVTVGELASTVDMTTFMLYLGSAPVTILPLIFYSIAIRITNLSTV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G+M+Y P L V +V + D+V+ + F + + ++ + V K +
Sbjct: 242 GLMQYIEPSLQFVLAVVFFGELFDSVKAVTFAFIWVGLLFTIFEGVAKLSKRRK 295
>gi|197118333|ref|YP_002138760.1| RarD protein, DMT superfamily transporter [Geobacter bemidjiensis
Bem]
gi|197087693|gb|ACH38964.1| RarD protein, DMT superfamily transporter [Geobacter bemidjiensis
Bem]
Length = 307
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 75/297 (25%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ +G ++ AY+ WG PLY + ++ V LE++SHR++WSL + I +
Sbjct: 12 ATEARRLGVIYGLAAYLCWGFFPLYFKSVKVVPPLEMVSHRIVWSLAFLLLLITWKKAWR 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S+L+ + + +A +W FIYA+ + +S YF+ P++SV LG +F
Sbjct: 72 SMLELLTLPKSLAVLFATTLL-IATNWLVFIYAISVGEVLQSSLGYFINPLVSVLLGFLF 130
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ERL Q I+ L + +L + + G +P ++LA+A+++ Y RK + V G
Sbjct: 131 LRERLERPQWISLALAVAGVLYLAIEYGSMPWIALALALSFGLYGLIRKALHVEPLVGLT 190
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +LA AL+Y+V +G F + L + G++ + +F+ K+ +L+
Sbjct: 191 VETLLLAPFALYYLVHLNQTGAGVFLTHSTRLDLLIPMSGIVTAIPLLLFAAAAKKLRLA 250
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G ++Y P + + ++ I + + F + + +Y + + +
Sbjct: 251 TIGFLQYITPTMHFLLAITIFGETFTHTHLVSFLFIWSGLALYSWHAYRFVTRQQVR 307
>gi|163845800|ref|YP_001633844.1| transporter DMT superfamily protein [Chloroflexus aurantiacus
J-10-fl]
gi|222523510|ref|YP_002567980.1| RarD protein, DMT superfamily transporter [Chloroflexus sp.
Y-400-fl]
gi|163667089|gb|ABY33455.1| RarD protein, DMT superfamily transporter [Chloroflexus aurantiacus
J-10-fl]
gi|222447389|gb|ACM51655.1| RarD protein, DMT superfamily transporter [Chloroflexus sp.
Y-400-fl]
Length = 303
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 81/297 (27%), Positives = 146/297 (49%), Gaps = 4/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T+ G AY LWG+ P+Y + L S E+++HR++WSL + +
Sbjct: 2 TNKTTLQGISAAIAAYALWGLLPVYWKALNGASATEILAHRMIWSLLFLLGVL-AIRRQW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + SA +LA +WG +++A+ + S YF+ P++S+ LG +
Sbjct: 61 EWITVIRQQRRLRLTYLASAILLAANWGIYVWAVQINRVVEASLGYFINPLVSIALGVLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ERL Q +A + + +T +G P ++LA+A+++ Y RK P+GS E
Sbjct: 121 LRERLRPAQWLAIGIAAAGVAWLTYSAGALPWIALALALSFGLYGLLRKQTPLGSFEALT 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E + PAL ++ W + G + + LI G++ + F +R L+
Sbjct: 181 VETLWMFPPALLWLSWLAGANGGIHH--DTGLWMLLISTGVVTAAPLLFFGAATRRIPLT 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+GI++Y AP L +V V + +P T + I FG + A+ +Y L + I + K
Sbjct: 239 TIGILQYLAPTLQLVLGVLVYGEPFSTAQLIGFGAIWTALAIYTLDSFIAVRHYRAK 295
>gi|269968821|ref|ZP_06182807.1| putative chloramphenicol-sensitive protein RarD [Vibrio
alginolyticus 40B]
gi|269826571|gb|EEZ80919.1| putative chloramphenicol-sensitive protein RarD [Vibrio
alginolyticus 40B]
Length = 306
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 146/298 (48%), Gaps = 1/298 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ T GT ++++WG+ P+Y ++L S+ E+++ R++ S+P F ++ +
Sbjct: 3 DSFMNNTRYGTFMAAFSFVIWGLLPIYYRYLPNASMDELLAWRIIGSVPVGFLIVLGITR 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K+ + K++ +++++ + W F +AL + S +F+ P++SV LG
Sbjct: 63 RGLNWKEIWLDKKSLWYTFVASSLMCISWSAFTWALTHHRVIDASLGFFIGPLVSVALGV 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L ++L+ ++IA +L + ++ +H G P+++L + + ++ Y +K I S
Sbjct: 123 FILGDKLSKGKLIAIVLATIGVMYQVIHYGQLPVIALTMGLFFALYGLYKKKINYDWSTT 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F+E +L AL Y+++ ++ GE + L G + +S I+
Sbjct: 183 LFVEALLLTPVALAYLLYKQWATGELASGTDTTTLLLYFGSAPITLLPLVFYSIAIRITN 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LSTVG+M+Y P L V +V + D V+ + F + ++ + ++I + K
Sbjct: 243 LSTVGLMQYIEPSLQFVLAVMFFGELFDEVKAVTFAFIWAGLLFTIFESIIKGHRRKK 300
>gi|308051391|ref|YP_003914957.1| RarD protein, DMT superfamily transporter [Ferrimonas balearica DSM
9799]
gi|307633581|gb|ADN77883.1| RarD protein, DMT superfamily transporter [Ferrimonas balearica DSM
9799]
Length = 301
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 1/296 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
GTL+ AY++WG PLY + + V+ E++ HRV+WS + A+V+F G +
Sbjct: 2 PETEARNGTLYAISAYLMWGFAPLYFKAIASVAPDEILMHRVIWSF-FLVIALVWFGGRM 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ L+ PK V +L +A ++ +W FI+A+ S YF+ P+ SV LG +
Sbjct: 61 GEVRALLRQPKKVALLALTAVLVGANWLIFIWAVANDHVLDASLGYFINPLFSVALGMLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ERL LQ++A + L +L+ + G + + +
Sbjct: 121 LGERLGRLQMLAVGIATLGVLVQLIQYGSVPWISLALAGSFGIYGLLRKQVNLQASTGLL 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +P S +F + L L+ G++ + FS R L
Sbjct: 181 VETAILLPLALAYWAWIDSPTANFANNPLSLNLLLLAAGVVTTLPLLAFSAAAIRIPLYL 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G+++Y P +M V ++ + + + + + FG + A+V+ + + + +
Sbjct: 241 LGMLQYIGPSIMFVMALTLFGESLSGPQLLTFGFIWSALVLLSFDGIKKARRKRRA 296
>gi|163739829|ref|ZP_02147236.1| rarD protein [Phaeobacter gallaeciensis BS107]
gi|161386863|gb|EDQ11225.1| rarD protein [Phaeobacter gallaeciensis BS107]
Length = 297
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 76/297 (25%), Positives = 148/297 (49%), Gaps = 1/297 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + + T G F AY++WG PLY + L + EV++HRV+WS+P ++
Sbjct: 1 MTPQPENKDTPQGLAFAVSAYLMWGFLPLYMKALAHMPAAEVVAHRVIWSVPVAGVLLII 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L+ L +P+ + M +A +++V+WG +++++ T + Y++ P+ SV
Sbjct: 61 LRRT-RDLRAALTSPRVLMMGAVTAALISVNWGIYVWSIATGHALDAALGYYINPLFSVM 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LG+V L ERL+ Q++A L L++L++ L +G + + K
Sbjct: 120 LGAVLLGERLSPAQLVAIGLAALAVLVLALDAGRLPWAAIGLTLSWGFYAFFKKSLPVGP 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F+ +L P + G F G+ DT L+G G++ + ++ G K
Sbjct: 180 NQGFMLEVLLLTPPALAYLAYLTVTGGAHFGGDFSDTALLLGCGVVTAVPLITYANGAKL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+LST+GI++Y AP ++ +++VF+ + R I F ++ +A+V+Y + + +
Sbjct: 240 LRLSTIGILQYIAPTMIFLAAVFVFGEEFGRARMIAFPMIWLALVIYSVSLLRQMRR 296
>gi|116671638|ref|YP_832571.1| transporter DMT superfamily protein [Arthrobacter sp. FB24]
gi|116611747|gb|ABK04471.1| RarD protein, DMT superfamily transporter [Arthrobacter sp. FB24]
Length = 310
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 74/300 (24%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G LF AY LWG+ PLY L+ +E++++RV+WSL I
Sbjct: 1 MDKDTTAGVLFGIGAYGLWGLLPLYFFVLQPAGAVEIVANRVVWSLVFCTLLITVTR-SW 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L ++ +G L +A ++AV+W + Y + T Q S YF+ P++SV LG
Sbjct: 60 RVLAAAFRDRTVLGPLSIAAALIAVNWLTYTYGVTTGQAVEASLGYFINPLVSVLLGVFV 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSEG 195
LKE L LQ A + ++++++T+ G A + + R +
Sbjct: 120 LKETLRPLQWAAVGIGFVAVVVLTISYGKLPWIALTLAFSFGLYGFVKKRIGPRADAVTS 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+E VL A +++ SG L+ G++ + F +R
Sbjct: 180 LTMETVVLTPLAAATMIYLAVSGTNTLGTQGPGHFWLLVASGVITAVPLLFFGASARRLP 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++T+G+++Y AP+L + ++ + ++ + R I FG+V +A+VV + + + +N +
Sbjct: 240 MTTIGLLQYFAPVLQFIVALVVFRETMTLDRWIGFGVVWLALVVLTVDMLAATRRNSVAR 299
>gi|52080639|ref|YP_079430.1| putative chloramphenicol sensitive protein [Bacillus licheniformis
ATCC 14580]
gi|52786013|ref|YP_091842.1| YojE [Bacillus licheniformis ATCC 14580]
gi|52003850|gb|AAU23792.1| putative chloramphenicol sensitive protein [Bacillus licheniformis
ATCC 14580]
gi|52348515|gb|AAU41149.1| YojE [Bacillus licheniformis ATCC 14580]
Length = 310
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 76/298 (25%), Positives = 148/298 (49%), Gaps = 4/298 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL- 78
G ++ +Y+LWG+ PLY + L+Q + L++++HR++WS + ++
Sbjct: 3 HSSQTKGIIYTALSYLLWGLLPLYWKVLDQTAALDILAHRIIWSFVFMCGVLLVLRQWKN 62
Query: 79 --SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ N K L+ S+ +++++W +I+A+ S Y++ P++S+ LG
Sbjct: 63 GVKAFRSLSGNRKEFVPLILSSVLISINWYVYIWAVSNGYILEASLGYYINPLVSIVLGI 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
VFLKE+L +Q A LL L +LI G +P ++L +A ++ Y A+K + S+ G
Sbjct: 123 VFLKEKLTRMQGAAVLLAALGVLISAFQYGSVPYIALMLAFSFGLYGLAKKRTSLSSAIG 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+E ++A A Y+++ G+I + L G+L + +F+ G K+
Sbjct: 183 LTLETMMIAPVAAIYLLFFSHPEKAQAASGSIGMMVLLFLAGVLTAIPLLLFAEGAKKLP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
L VGI++Y AP + + VF+ +P ++ + F + A++++ L K
Sbjct: 243 LYQVGILQYIAPTITLCLGVFVYHEPFNSSKVFTFSCIWAALILFTLSQFQWKRPEKV 300
>gi|219847605|ref|YP_002462038.1| RarD protein, DMT superfamily transporter [Chloroflexus aggregans
DSM 9485]
gi|219541864|gb|ACL23602.1| RarD protein, DMT superfamily transporter [Chloroflexus aggregans
DSM 9485]
Length = 302
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ G AY LWG+ P+Y + L + E+++HR++WSL A++
Sbjct: 3 HKASLQGVGAAIAAYALWGLLPIYWKALNGATATEILAHRMIWSLLF-LLAVLAVRRQWQ 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + + + SAT+LA +WG +++A+ + S YF P++S+ LG + L
Sbjct: 62 WVQVMRRQRRLRLTYLASATLLAANWGIYVWAVQMNRVVEASLGYFTNPLVSIALGVIVL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ERL Q +A L + +T +G L +A+A+ S + +
Sbjct: 122 RERLRPAQWLAIALATAGVAWLTYSAG-ALPWIALALALSFGFYGLLRKQTPLGSFEALT 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + + +G + L L+ G++ + F +R L+T+
Sbjct: 181 VETLWMFVPAVLWLGWLAGNNGGIHHDAGLWLLLLSTGVVTAAPLLFFGAATQRIPLTTI 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
GI++Y AP L ++ V + +P + I FG + +A+ VY +++ + + +T
Sbjct: 241 GILQYLAPTLQLLLGVLVYGEPFSLTQLIGFGAIWVALAVYTTDSLLAAHRYRT 294
>gi|238027384|ref|YP_002911615.1| RarD protein, DMT superfamily transporter [Burkholderia glumae
BGR1]
gi|237876578|gb|ACR28911.1| RarD protein, DMT superfamily transporter [Burkholderia glumae
BGR1]
Length = 297
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 85/286 (29%), Positives = 150/286 (52%), Gaps = 2/286 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L+ F A+ LWG+ P+Y + L +S LE++SHR+ WSL ++ + L +
Sbjct: 3 IGILYAFLAFFLWGLFPIYFKALHAISPLEILSHRMAWSLVF-IAILLTVRRNWNWLPIS 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L+ P+ V AT+L+ +WG +I+A+ + + S YF+ P+ +V LG VFL ERL
Sbjct: 62 LREPRTVLRFASCATLLSANWGIYIWAVNSGRVVEASLGYFINPLANVLLGFVFLHERLR 121
Query: 145 HLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A + +L +T +G P +SL + +T+ +Y RKT +G+ EG +E +L
Sbjct: 122 QWQWVAVATATVGVLWLTWQNGAPPWVSLVLGLTFGSYGLLRKTAQLGALEGLALETLLL 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
Y++W G F I L L G +++ +F+ G +R LS +GI++
Sbjct: 182 FPVVFLYLLWLAAHGESGFVAAPIGIKLLLAAAGPVSAIPLLLFAAGARRIPLSLLGIVQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y P + ++ V + ++ V+ + +G + A+V+Y V +
Sbjct: 242 YVTPTIQLLLGVLVYRETFGLVKLVGYGAIWAALVIYAAEGVWRAR 287
>gi|90581057|ref|ZP_01236857.1| putative RarD [Vibrio angustum S14]
gi|90437753|gb|EAS62944.1| putative RarD [Vibrio angustum S14]
Length = 301
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 83/302 (27%), Positives = 149/302 (49%), Gaps = 2/302 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E+ + G + AY +WGI P+Y + + V LE++SHRV+WS + I FS
Sbjct: 1 MEDNNNLAKRGIILAISAYTMWGIAPIYFKSIASVPPLEILSHRVIWSFFFLALII-AFS 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+K PK + +L SA ++ +W FI+A+ S Y++ P+++V LG
Sbjct: 60 RQWVRVKAVFTQPKTLFLLTISALLVGCNWLIFIWAVNNNHLLDASLGYYINPLLNVLLG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L ERL LQ A L+ + ++ + G P ++ A+A ++ Y RK I + +
Sbjct: 120 MLLLGERLRRLQWGAVLIAAIGVIAELIQFGSLPWIAFALATSFGFYGLLRKKINIDAQT 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE VL A Y+ + S + ++ L L+ G++ + F+ +
Sbjct: 180 GLFIETFVLLPLAAIYLFFISSSPTANLTDNSLDLNLLLVAAGIVTTLPLLCFTGAATKL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
KLST+G ++Y P LM + + FI ++P I FG + +A++++ + + ++
Sbjct: 240 KLSTLGFLQYIGPSLMFILATFIYQEPFKLEHGITFGCIWLALLLFSIDGIRAHQQSSNN 299
Query: 315 KS 316
K+
Sbjct: 300 KN 301
>gi|91225479|ref|ZP_01260601.1| putative chloramphenicol-sensitive protein RarD [Vibrio
alginolyticus 12G01]
gi|91189842|gb|EAS76115.1| putative chloramphenicol-sensitive protein RarD [Vibrio
alginolyticus 12G01]
Length = 306
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 69/298 (23%), Positives = 147/298 (49%), Gaps = 1/298 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ T GT ++++WG+ P+Y ++L S+ E+++ R++ S+P F ++ +
Sbjct: 3 DSFMNNTRYGTFMAAFSFVIWGLLPIYYRYLPNASMDELLAWRIIGSVPVGFLIVLGITR 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K+ + K++ +++++ + W F +AL + S +F+ P++SV LG
Sbjct: 63 RGLNWKEIWLDKKSLWYTFVASSLMCISWSAFTWALTHHRVIDASLGFFIGPLVSVALGV 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L +RL+ ++IA +L + ++ +H G P+++L + + ++ Y +K I S
Sbjct: 123 FILGDRLSKGKLIAIVLATIGVMYQVIHYGQLPVIALTMGLFFALYGLYKKKINYDWSTT 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F+E +L AL Y+++ ++ GE + L G + +S I+
Sbjct: 183 LFVEALLLTPVALAYLLYKQWATGELASGTDTTTLLLYFGSAPITLLPLVFYSIAIRITN 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LSTVG+M+Y P L V +V + D V+ + F + + ++ + ++I + K
Sbjct: 243 LSTVGLMQYIEPSLQFVLAVMFFGELFDEVKAVTFAFIWVGLLFTIFESIIKGHRRKK 300
>gi|283834580|ref|ZP_06354321.1| protein RarD [Citrobacter youngae ATCC 29220]
gi|291069709|gb|EFE07818.1| protein RarD [Citrobacter youngae ATCC 29220]
Length = 297
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 78/296 (26%), Positives = 141/296 (47%), Gaps = 2/296 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + ++ S S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-VLMSISRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K L+ PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 GVKTLLQTPKKIFLLALSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A LL +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVLLAACGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNPMSLNLLLIAAGIVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G +Y P LM + ++ + + + F + +A+ ++++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAITFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRRVRRS 297
>gi|325289951|ref|YP_004266132.1| RarD protein, DMT superfamily transporter [Syntrophobotulus
glycolicus DSM 8271]
gi|324965352|gb|ADY56131.1| RarD protein, DMT superfamily transporter [Syntrophobotulus
glycolicus DSM 8271]
Length = 297
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 143/289 (49%), Gaps = 3/289 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G VF A ILWG P+Y + L +S +++++R++ S VF +V +
Sbjct: 11 GIGQVFLAVILWGSLPVYWKQLTGISPDQILANRIICSFVFVFLILV--GQKRLNYFRDV 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ G++ S ++ ++W +IYA+ T S Y++ P++++ LG + LKE++N
Sbjct: 69 LRNEKKGIIFLSGLMITLNWFTYIYAVNTDHIIEASLGYYINPLLTILLGRIVLKEKMNV 128
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q A + +++ T+ G P++SL +A T+S Y +K + G +E ++
Sbjct: 129 QQATALFFALTGVVVSTVSYGKLPVISLVLAFTFSIYSLLKKRVQFDVVTGLTLETMIVF 188
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y++ F G + + + LFL G G++ + +F+YG K+ L T+G ++Y
Sbjct: 189 PAAVCYLLILHFHGVKVYGGLTYSELLFLWGTGVITAIPLMLFAYGAKKVPLITMGFIQY 248
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P L + VF + V T+ FG++ A+ +Y + + +
Sbjct: 249 LTPTLSLFIGVFFYHEEFRAVETVTFGLIWFALGIYTFSQLKTLSRQER 297
>gi|146313609|ref|YP_001178683.1| transporter DMT superfamily protein [Enterobacter sp. 638]
gi|145320485|gb|ABP62632.1| RarD protein, DMT superfamily transporter [Enterobacter sp. 638]
Length = 298
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVALMSV-SRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K L+ PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 GVKKLLQTPKKIFLLALSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A LL + +L+ G P+++L +A +++ Y RK I V + G
Sbjct: 122 GERFRRMQWVAVLLALCGVLVQLWTFGSLPVIALGLAFSFAFYGLVRKKIAVEAQTGMLF 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H L LI G++ + F+ R +LST
Sbjct: 182 ETLWLLPLAAIYLFGIADSSTSHMGSNPWSLNLMLIAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ V++ + + K
Sbjct: 242 LGFFQYIGPTLMFLLAVMFYGEVPGADKMVTFAFIWVALAVFVADALYTQRRVKK 296
>gi|258651245|ref|YP_003200401.1| RarD protein, DMT superfamily transporter [Nakamurella multipartita
DSM 44233]
gi|258554470|gb|ACV77412.1| RarD protein, DMT superfamily transporter [Nakamurella multipartita
DSM 44233]
Length = 319
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 148/304 (48%), Gaps = 4/304 (1%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
G++ + + G +F AY LWG+ PLY LE +E+++HR+LWSLP +
Sbjct: 16 GVTPASTNAVPPRGLMFGLIAYGLWGMFPLYFPLLEPAGAIEILAHRMLWSLPISSIILT 75
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G +++ + G++V +A +++V+W +I+A+ + YF+ P++SV
Sbjct: 76 VVRGWRAIVTMPPR---VWGLVVAAAILISVNWVIYIWAVNNGHVVEAALGYFINPLVSV 132
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVG 191
LG + +ERL Q A L +++++ + G P ++L++A ++ Y +K IP+
Sbjct: 133 VLGVLLFRERLRIPQWTAVGLGTGAVVVLAVAGGSFPWVALSLAFSFGFYGLVKKIIPLA 192
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ E V +PAL YVV +G F L + GL+ F+
Sbjct: 193 PTASLTAEGLVQFVPALIYVVTITVAGTSTFASYGSGHVLLMASTGLVTCVPLLAFAAAA 252
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ LS +G+++Y P+L + V +P+ R + F +V A++V+ + + + +
Sbjct: 253 QALPLSILGLLQYLTPVLQFLLGVLWFHEPMPAYRWVGFVLVWSALIVFTVDAMRQARRT 312
Query: 312 KTKK 315
+
Sbjct: 313 SVAR 316
>gi|260887756|ref|ZP_05899019.1| protein RarD [Selenomonas sputigena ATCC 35185]
gi|330838056|ref|YP_004412636.1| RarD protein, DMT superfamily transporter [Selenomonas sputigena
ATCC 35185]
gi|260862499|gb|EEX76999.1| protein RarD [Selenomonas sputigena ATCC 35185]
gi|329745820|gb|AEB99176.1| RarD protein, DMT superfamily transporter [Selenomonas sputigena
ATCC 35185]
Length = 292
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 69/290 (23%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + YI+WG PLY L S E+++HR+ WS + + +
Sbjct: 3 QKKRGMIAALSTYIIWGFLPLYWNLLTAASAAEILAHRISWSFVFMLLVLAVSKRWQNFC 62
Query: 82 KDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D +N + +L ++ ++ ++W +I+A+ TS Y+ TP+++V LG V
Sbjct: 63 QDCSALRQNRRRALLLFGASILITINWLTYIWAVNNGHVIDTSLGYYSTPLMNVALGVVL 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
KERL ++ LL +L+MT+ G P ++L +A+T+ Y +K + +
Sbjct: 123 FKERLTPSARVSVLLAFCGVLLMTVQIGKLPWVALVLALTFGLYGALKKKLALHPFSSIT 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E ++ L Y ++ F L + L LIG G + +FSYG L+
Sbjct: 183 LETLLVLPVFLPYAIYLAGEPTSQFSLATPREMLLLIGSGAATATPLILFSYGANLLPLN 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+G +Y +P + ++ VF +P + + A++++ L +
Sbjct: 243 VLGFFQYLSPTIALLLGVFFFHEPFGAAQLSACACIWTALLIFTLSERVR 292
>gi|229098002|ref|ZP_04228952.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock3-29]
gi|228685439|gb|EEL39367.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock3-29]
Length = 313
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 77/305 (25%), Positives = 155/305 (50%), Gaps = 6/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++A G ++ AY +WGI P+Y +++E+V E+++HR++W+ + +
Sbjct: 1 MGSQSAQQK--KGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLAV 58
Query: 74 FSGGLSLLKDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+I
Sbjct: 59 TKRFRQFIGEFVNLFKRPKLLMSLTIASILISGNWFVYIWAVNHNHVIEASLGYYINPLI 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ LG+V LKE+LN Q +A L + ++I+T+ G IP +SL++A ++ Y +K +
Sbjct: 119 SILLGTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLAFSFGLYGLTKKLLN 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ G +E ++ A Y+V G G F ++ TL LIG G++ + F+
Sbjct: 179 YDATIGLTMETMLVTSFAFIYLVMTGVHGFGSFGAISMLSTLLLIGAGIVTALPLFYFAK 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + L VG ++Y AP + ++ VF+ + T + F + +A+ V+ +
Sbjct: 239 GAQLIPLYMVGFLQYIAPTISLILGVFVFGEHFTTTHMMAFFCIWVALFVFSIAKTKFLV 298
Query: 310 KNKTK 314
+ + K
Sbjct: 299 QKQPK 303
>gi|21284344|ref|NP_647432.1| hypothetical protein MW2615 [Staphylococcus aureus subsp. aureus
MW2]
gi|49487474|ref|YP_044695.1| hypothetical protein SAS2580 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297209469|ref|ZP_06925867.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300911493|ref|ZP_07128942.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus TCH70]
gi|21205788|dbj|BAB96480.1| MW2615 [Staphylococcus aureus subsp. aureus MW2]
gi|49245917|emb|CAG44398.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296885930|gb|EFH24865.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300887672|gb|EFK82868.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus TCH70]
Length = 302
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++++ E+++ R+++S + F +
Sbjct: 1 MNTEYKKGIFLALSAYILWGILPIYWQFVDEIGAFEILAFRIIFSAIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFNIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|56698219|ref|YP_168591.1| RarD [Ruegeria pomeroyi DSS-3]
gi|56679956|gb|AAV96622.1| RarD [Ruegeria pomeroyi DSS-3]
Length = 299
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 146/295 (49%), Gaps = 1/295 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++ T G AY+LWG PLY + L V +EV++HRV+WS+P +V
Sbjct: 4 QRPENVDTPKGLALAITAYLLWGFLPLYMKLLAHVPSIEVVAHRVIWSVPVAGALLVALG 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ L+NP+ +GM +A +++V+W +++++ + + Y++ P+ S+ L
Sbjct: 64 RT-RDLRAALRNPRMLGMACLTAALISVNWAIYVWSINNGRALDAALGYYINPLFSIALA 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+FL ERL+ QI A LL + ++ + +G + + K
Sbjct: 123 GLFLGERLSRAQIGAILLAAAGVAVLIVQAGELPWAALGLTFSWGFYALFKRSLPIGPNQ 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F+ ++ P V + G+ F G D+L L G G++ + ++ G K +
Sbjct: 183 GFLLEVLILTPFALAYVLWLMAQGQGHFGGFGADSLLLAGAGVVTAVPLLFYANGAKLVR 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
LST+GI++Y AP ++ +S+V + + ID R I F ++ A+V+Y +P + +
Sbjct: 243 LSTMGILQYIAPTMIFISAVALFGEEIDRGRMIAFPMIWAALVIYSVPMLRQMRR 297
>gi|152998932|ref|YP_001364613.1| transporter DMT superfamily protein [Shewanella baltica OS185]
gi|160873518|ref|YP_001552834.1| transporter DMT superfamily protein [Shewanella baltica OS195]
gi|151363550|gb|ABS06550.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS185]
gi|160859040|gb|ABX47574.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS195]
gi|315265747|gb|ADT92600.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS678]
Length = 294
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L AY +WG PLY + L VS E++ HRV+WS + + + G S L+
Sbjct: 7 RKGILLAVSAYCMWGFAPLYFKLLNHVSATEILLHRVIWSFVFMLIIMQFIGG-FSRLRL 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG +FL ERL
Sbjct: 66 LFKQPKQLMVLTITSILIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LQ A L +LI + G IP++SLA+A T+ Y RK + V + G +E V
Sbjct: 126 RKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGFYALLRKKVNVDAKAGLLVETAV 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL Y+V + + L L+ G++ + F+ R LS +G
Sbjct: 186 LLPVALIYLVATLDTATASMLTNDWQLNLMLMAAGIVTTIPLLCFAGAAVRIPLSMLGFF 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+Y P +M + +V + +P D + + FG + A++V+ L
Sbjct: 246 QYIGPSIMFILAVSLFNEPFDAEKGVTFGFIWSALLVFTLDMAYKRK 292
>gi|303257782|ref|ZP_07343792.1| protein RarD [Burkholderiales bacterium 1_1_47]
gi|302859385|gb|EFL82466.1| protein RarD [Burkholderiales bacterium 1_1_47]
Length = 299
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 2/286 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + V AY++WG+ P Y ++ V+ E++ HRVLW+ + + ++
Sbjct: 3 KGVVSVLVAYLIWGLYPFYFHAMQHVAPTEIVIHRVLWTFALLAVYLFCSRR-WRWIQKA 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + V + + S+ ++ +W + YA++T Q S YF+ P++SV LG+VFLKE+LN
Sbjct: 62 VTDRRTVAVFLMSSVLITANWSTYTYAIVTNQTLEASLGYFMNPLVSVLLGTVFLKEKLN 121
Query: 145 HLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q++A + ++ +T P L L +A+++ Y RK P+GS EG +E
Sbjct: 122 KAQMLAIVFACAGVMWVTFKQGEFPALGLTLALSFGFYGLVRKMAPLGSLEGLTLETAFA 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL + +G F G D +LI G + + +F+YG+K+ STVG ++
Sbjct: 182 FPVALLATFYFAGNGDLTFVHGTSWDKFWLIMAGPITTIPLILFAYGLKQVPYSTVGFIQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y +P ++ +F + + R I F ++ +++++ S
Sbjct: 242 YLSPTMVFFIGLFFFGEELQVDRLIGFILIWAGVLIFVGENFFRSH 287
>gi|296117565|ref|ZP_06836149.1| protein RarD [Corynebacterium ammoniagenes DSM 20306]
gi|295969296|gb|EFG82537.1| protein RarD [Corynebacterium ammoniagenes DSM 20306]
Length = 321
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 71/286 (24%), Positives = 146/286 (51%), Gaps = 4/286 (1%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
F AY+LWG+ P + L S LE+++HR++W+ + +V L + + +
Sbjct: 3 FAIGAYLLWGVFPAFFPLLLPASPLEILAHRIIWTAVLIIIYLVITGTWRELTQLSGRTW 62
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ ++ + ++WG ++ A+ + + YF+ P++SV LG + LKE+L LQ+
Sbjct: 63 LWLSA---ASVAITINWGTYVLAVNSGHVADAALGYFINPLVSVALGVIILKEQLRKLQL 119
Query: 149 IAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
A + +++L +T +G P +SL +A ++ Y +K + V S+ E V++ A
Sbjct: 120 SAVGVAAVAVLWLTFMTGEGPWISLLLAASFGIYGLLKKQVNVSSAGSVAAETLVMSPVA 179
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L Y+ + + F T L+ GL+ + +F+ G K LST+G+++Y P
Sbjct: 180 LIYIGYLSVNDQSTFLSEGPSHTALLVVSGLITALPLILFAQGAKLLPLSTIGMLQYVTP 239
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ ++ +VF+ ++ + + R I F I+ A+ +Y++ + + +
Sbjct: 240 TMQLLWAVFVTQEHMSSERWIGFVIIWFAVALYMIDLLRIRREARR 285
>gi|257455210|ref|ZP_05620445.1| RarD protein [Enhydrobacter aerosaccus SK60]
gi|257447172|gb|EEV22180.1| RarD protein [Enhydrobacter aerosaccus SK60]
Length = 332
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 3/287 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
T G L A+++WG PLY + L+ +E+I HR++W+ + + +K
Sbjct: 46 TPKGVLTALAAFLIWGFFPLYFKLLKDYDAIEIIGHRIIWTFVTILLIMTVTK-NWHWVK 104
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
NPK + S TI++V+W +++A+ Q S Y++ P++ + L V +KE+
Sbjct: 105 VIQANPKWLLYTAVSGTIISVNWLVYVWAVNHDQILEASLGYYIGPLMGILLSLVVIKEK 164
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQ +A +L + + I + G P +SL +A ++S Y + P+ + FIE
Sbjct: 165 LRPLQWMAVILAAIGVAIQLVVLGKLPWVSLLLASSFSVYGLMHRHTPLDALSAMFIETA 224
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L + + + + + F + L+ G + +F+ K S +
Sbjct: 225 LLVPVFIGWFAMHDVASSQLDFWLSPSIF-LLMIAGPVTLIPLLMFNKATKMVNFSLLSF 283
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ Y P ++ + ++F+ +P + + I F + +V + +
Sbjct: 284 LNYLTPSMIFLLAIFLYHEPFNIYKLITFAFIWTGLVFFSYDLIKQR 330
>gi|260901714|ref|ZP_05910109.1| protein RarD [Vibrio parahaemolyticus AQ4037]
gi|308108864|gb|EFO46404.1| protein RarD [Vibrio parahaemolyticus AQ4037]
Length = 301
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 1/289 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++++WG+ P+Y +FL ++ E+++ R++ S+P + +
Sbjct: 7 GNFMAALSFVIWGLLPVYYRFLPNAAMDELLAWRIIGSVPVGILIVYAVTRHWPNWSQVW 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ K++ +++++ + W F +AL + S +F+ P++SV LG L ++L+
Sbjct: 67 RDKKSLWYTFVASSLMCISWSAFTWALTHHRVIDASLGFFIGPLVSVSLGVFVLGDKLSK 126
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q+IA LL +L G P ++L + + ++ Y +K I S FIE VLA
Sbjct: 127 GQLIAILLATCGVLYQVFQYGQLPFVALTMGLFFALYGLYKKKINYDWSTTLFIEALVLA 186
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL Y+++ ++ GE + L G + +S I+ LSTVG+M+Y
Sbjct: 187 PFALGYLLFKQWTTGELASSVDTTTLLLYFGSAPITILPLIFYSIAIRITNLSTVGLMQY 246
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P L + +V + D V+ + F + + +++ + V K K
Sbjct: 247 IEPSLQFILAVVFFGELFDDVKAVTFAFIWVGLLLTIFEGVAKGIKRKR 295
>gi|253700883|ref|YP_003022072.1| RarD protein, DMT superfamily transporter [Geobacter sp. M21]
gi|251775733|gb|ACT18314.1| RarD protein, DMT superfamily transporter [Geobacter sp. M21]
Length = 307
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ +G ++ AY+ WG PLY + ++ V LE++SHR++WSL + I +
Sbjct: 12 ATEARRLGVIYGLAAYLCWGFFPLYFKSVKIVPPLEMVSHRIVWSLAFLLLLITWKRAWR 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S+L+ + + +A +W FIYA+ + +S YF+ P++SV LG VF
Sbjct: 72 SMLELLTLPKSLAVLTATTLL-IATNWLVFIYAISVGEVLQSSLGYFINPLVSVLLGFVF 130
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ERL Q I+ L + +L + + G +P ++LA+A+++ Y RK +PV G
Sbjct: 131 LRERLERPQWISLALAVAGVLYLAIEYGSMPWIALALALSFGLYGLIRKALPVEPLVGLT 190
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +LA AL+Y+V +G F + L + G++ + +F+ K+ +L+
Sbjct: 191 VETLLLAPFALYYLVHLNQTGAGIFLTHSTALDLLIPMSGIVTAIPLLLFAAAAKKLRLA 250
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+G ++Y P + + ++ I + + F + + +Y + + +
Sbjct: 251 TIGFLQYITPTMHFLLAITIFGETFTHTHLVSFLFIWSGLALYSWHAYRCVTRQQVR 307
>gi|89902776|ref|YP_525247.1| rarD protein [Rhodoferax ferrireducens T118]
gi|89347513|gb|ABD71716.1| rarD protein [Rhodoferax ferrireducens T118]
Length = 316
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 75/291 (25%), Positives = 150/291 (51%), Gaps = 2/291 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + AY WG+ P++ + L +V+ E++ HR++WSL + + + L+D
Sbjct: 27 GLFYAALAYTAWGLLPVFFKQLTRVNAFEIVMHRMVWSLVFLLCVLAVLKR-WAWLRDLA 85
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P+ + SA +L+V+W +++A+ S YF+ P+++V LG F ER
Sbjct: 86 RQPRVLLAFAVSALLLSVNWSVYVWAVQNAHMVDASLGYFILPLVNVALGFAFWNERPRP 145
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A + +L +T+ +G P ++L +A+T+ Y RK +G+ EG +E +L
Sbjct: 146 GQWLAVAVAAAGVLWLTVQAGRLPWVALVLAITFGIYGLLRKLAKLGALEGLTLETLLLW 205
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ + W + G G+ +L+ G L + +F+ G +R ++T+GI++Y
Sbjct: 206 PMAVGMLAWWAWHGQGALVQGDPATLGWLLLAGPLTAIPLLLFAAGARRIPMATLGILQY 265
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+P L ++ V++ + + R I F ++ +A+V+Y + N+ K + +
Sbjct: 266 ISPSLQMLLGVWLYGEAFEPARAIGFYLIWMALVLYSADSFWNARKQRFNQ 316
>gi|114704765|ref|ZP_01437673.1| rarD protein [Fulvimarina pelagi HTCC2506]
gi|114539550|gb|EAU42670.1| rarD protein [Fulvimarina pelagi HTCC2506]
Length = 328
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 160/301 (53%), Gaps = 7/301 (2%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGI-TPLYTQFLEQVSVLEVISHRVLW 62
A + + G S + + T G AY +WG+ PLY + L VS LE+++HR+LW
Sbjct: 2 AADIESVAAGYSMQISESETRRGLFLALGAYGIWGLVLPLYMKALNHVSPLEIVAHRILW 61
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+LP +VY L L + + VG+ +A +++ +WG ++YA+++ Q +
Sbjct: 62 ALPFAALLLVYQGR-LKHTLGYLTDLRTVGLATLTAILISANWGVYVYAIVSNQAIDAAL 120
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAY 181
Y++ P+I+V LG++ L+ER LQ +A L + + IMT+ G+P ++L +A ++ Y
Sbjct: 121 GYYINPLINVALGALVLRERPTRLQGVAIALAFVGVAIMTVKAGGLPWIALVLACSFGTY 180
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
RK + V +SEGFF+E+ +L AL + G + L+G G L +
Sbjct: 181 GLIRKVVKVDASEGFFLEVVLLTPLALAVLSMLGDQHFGGMLSETL----LLVGAGPLTA 236
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+F+ G + +T+GI++Y P L+ +++VF+ +P + + F + A+V+Y
Sbjct: 237 VPLILFAAGARLLHFATIGILQYAVPTLLFLTAVFLFGEPFSVWQLVAFAFIWAALVLYT 296
Query: 302 L 302
+
Sbjct: 297 I 297
>gi|254229227|ref|ZP_04922646.1| RarD protein [Vibrio sp. Ex25]
gi|262395578|ref|YP_003287431.1| RarD protein [Vibrio sp. Ex25]
gi|151938312|gb|EDN57151.1| RarD protein [Vibrio sp. Ex25]
gi|262339172|gb|ACY52966.1| RarD protein [Vibrio sp. Ex25]
Length = 301
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 145/294 (49%), Gaps = 1/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T GT ++++WG+ P+Y ++L S+ E+++ R++ S+P F ++ +
Sbjct: 2 NNTRYGTFMAAFSFVIWGLLPIYYRYLPNASMDELLAWRIIGSVPVGFLIVLGITRRGPS 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + K++ +++++ + W F +AL + S +F+ P++SV LG L
Sbjct: 62 WKEIWCDKKSLWYTFVASSLMCISWSAFTWALTHHRVIDASLGFFIGPLVSVALGVFILG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++L+ ++IA +L + ++ +H G P+++L + + ++ Y +K I S F+E
Sbjct: 122 DKLSKGKLIAIVLATIGVMYQVIHYGQLPVIALTMGLFFALYGLYKKKITYDWSTTLFVE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L A+ Y+ + ++ GE +I L G + +S I+ LSTV
Sbjct: 182 ALLLTPVAVAYLFYKQWTVGELASGVDITTLLLYFGSAPITLLPLIFYSIAIRITNLSTV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G+M+Y P L V +V + D V+ + F + + ++ + +++ K K
Sbjct: 242 GLMQYIEPSLQFVLAVMFFGELFDEVKAVTFAFIWVGLLFTIFESIVKGHKRKK 295
>gi|226942750|ref|YP_002797823.1| hypothetical protein Avin_05950 [Azotobacter vinelandii DJ]
gi|226717677|gb|ACO76848.1| transmembrane protein, RarD family [Azotobacter vinelandii DJ]
Length = 298
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L AY LWG+ PLY + LE + E++ HRVLWS + +
Sbjct: 2 HAANPRRGYLLGLTAYGLWGLFPLYFKILENIPAGEILVHRVLWSALCGLLLLQLWR-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ + +L S ++A +W +++A+ + TS Y++ P+++V LG +
Sbjct: 61 GWWRELRDNPRLLAVLAGSGLLIACNWLLYVWAVNNGRMLETSLGYYINPLVNVLLGLLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L L +L G P +SLA+A+++ Y RK PV + G
Sbjct: 121 LGERLRPLQWLAVGLAALGVLQQLWQLGSLPWISLALALSFGFYGLIRKRAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L PAL ++ + +G + P L+L G + F+ + +
Sbjct: 181 VETWLLLPPALGWLWLHPDAGSAQGAFWSTPQALWLAMAGPVTLVPLLCFNAAARHLPYA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+G ++Y AP L+++ +VF+ +P++ + F + + + VY L + +
Sbjct: 241 TLGFLQYLAPTLVLLLAVFVYGEPLEPGKLAAFVCIWLGLAVYSLDIWRHLQR 293
>gi|126172634|ref|YP_001048783.1| transporter DMT superfamily protein [Shewanella baltica OS155]
gi|304411663|ref|ZP_07393275.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS183]
gi|307306285|ref|ZP_07586030.1| RarD protein, DMT superfamily transporter [Shewanella baltica
BA175]
gi|125995839|gb|ABN59914.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS155]
gi|304349851|gb|EFM14257.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS183]
gi|306911158|gb|EFN41585.1| RarD protein, DMT superfamily transporter [Shewanella baltica
BA175]
Length = 294
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L AY +WG PLY + L VS E++ HRV+WS + + + G S L+
Sbjct: 7 RKGILLAVSAYCMWGFAPLYFKLLNHVSATEILLHRVIWSFVFMLIIMQFIGG-FSRLRL 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG +FL ERL
Sbjct: 66 LFKQPKQLMVLTITSILIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LQ A L +LI + G IP++SLA+A T+ Y RK + V + G +E V
Sbjct: 126 RKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGFYALLRKKVNVDAKAGLLVETAV 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL Y+V + + L L+ G++ + F+ R LS +G
Sbjct: 186 LLPVALIYLVATLDTATASMLTNDWQLNLMLMAAGIVTTIPLLCFAGAAVRIPLSMLGFF 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+Y P +M + +V + +P D + + FG + A++V+ L
Sbjct: 246 QYIGPSIMFILAVSLFNEPFDAEKGVTFGFIWSALLVFTLDMAYKRK 292
>gi|254460164|ref|ZP_05073580.1| RarD protein [Rhodobacterales bacterium HTCC2083]
gi|206676753|gb|EDZ41240.1| RarD protein [Rhodobacteraceae bacterium HTCC2083]
Length = 298
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 84/296 (28%), Positives = 163/296 (55%), Gaps = 2/296 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++ T G +F AY LWG PLY + L + E+I+HR++WS+P ++
Sbjct: 2 MQRENVDTPQGLVFALTAYFLWGFLPLYIKLLAHIPPAEIIAHRIIWSVPIAVIVLLLLR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S + L+ PK +GM +A +++++WG +++A+ + Y++ P+ S+ LG
Sbjct: 62 RT-SDVITALRTPKMLGMACVTAALVSLNWGIYVWAVTAGYAMEAALGYYMNPLFSIALG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ L E+L+ Q++A L +++++ + G+P +L + TW Y +K +P+G ++
Sbjct: 121 ALLLGEKLSRAQLVAIALAATAVIVLVVDGGGLPWAALGMMFTWGFYALGKKQLPIGPNQ 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GF +E+ +L AL YV + G +F +T L+G G++ + I++ G K
Sbjct: 181 GFLLEVLILLPFALAYVAYLSTQGISYFEPALTHNTWLLLGCGVITAVPLMIYANGAKLL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+LST+GI++Y AP ++ + +VF+ +P R + F ++ +A++VY V K
Sbjct: 241 RLSTIGILQYIAPTIIFLIAVFVFDEPFGRARAVAFPLIWLALIVYTTSMVRQMRK 296
>gi|1906367|emb|CAA72724.1| hypothetical protein [Pseudomonas fluorescens]
Length = 294
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 66/294 (22%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + Y++WG+ PLY + + V E+I HRVLWS ++ +
Sbjct: 2 HAANPRKGYILGLSTYVIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGSLLLMAWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NPK + +L S +++A +W +++++ + + S Y++ P+++V LG +
Sbjct: 61 GWFRELRDNPKRLAILALSGSLIAGNWLTYVWSVNSGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L + + +P +SL +A+T+ Y RK PV + G
Sbjct: 121 LGERLRRLQWVAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L A+ ++++N + + + +L+ G + F+ + +
Sbjct: 181 VETWMLVPIAVAWLLFNPSAHSAQLAFWSTSEAWWLVAAGPVTLIPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G ++Y AP L+++ +V + + + + F + +VVY + + K
Sbjct: 241 ALGFLQYVAPTLVLLEAVLLFGEHLAPSTLLAFAFIWAGLVVYSVDAWLTVRKR 294
>gi|260469774|ref|ZP_05813932.1| RarD protein, DMT superfamily transporter [Mesorhizobium
opportunistum WSM2075]
gi|259028457|gb|EEW29775.1| RarD protein, DMT superfamily transporter [Mesorhizobium
opportunistum WSM2075]
Length = 305
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 180/297 (60%), Gaps = 2/297 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G L AY+LWG+ P Y + + + + EVI+HR++WS+P +++
Sbjct: 10 ADSKARRGFLLALGAYLLWGLLPFYMKAVAHLPLAEVIAHRIVWSVPIAAAVLIWAGRT- 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K L++P+ + M +A +++V+WG +++A+ + T+ Y++ P++SV +G++
Sbjct: 69 ADFKAALRSPRTISMAALTAALISVNWGIYVWAIAVDRTVETALGYYINPLVSVVVGALL 128
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL+ LQI A +L +++ ++T+ G P +SLA+A +++AY F RKT+P+G S+GF
Sbjct: 129 LGERLDRLQIAAVVLAAVAVAVLTIEGGKLPWVSLALAFSFAAYGFFRKTLPIGPSQGFL 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E+ +L++PAL Y+V+ +G +H N DT LIG G + S +F++G K +LS
Sbjct: 189 LEVLLLSVPALGYIVYLIATGQDHIVSSNSTDTALLIGCGPVTSVPLLLFAFGAKLLRLS 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T+GIM+Y AP ++ + +V I +P T + + F ++ A+ +Y + ++ K +
Sbjct: 249 TIGIMQYIAPTMVFLIAVLIFDEPFGTTQALAFALIWAALAIYSWSMLTSARKASAR 305
>gi|152994209|ref|YP_001339044.1| transporter DMT superfamily protein [Marinomonas sp. MWYL1]
gi|150835133|gb|ABR69109.1| RarD protein, DMT superfamily transporter [Marinomonas sp. MWYL1]
Length = 304
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 3/298 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L+ A+ LW I P+Y + + + E+++HR++WS V IV
Sbjct: 1 MQTSSKSGILYALTAFTLWAIAPIYFKEMSFIPAQEILAHRIIWSCLLVMILIVLLR-YT 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LK L++PK + ++ S ++A +WG FI+A+ + S Y++ P+IS+ LG +F
Sbjct: 60 DALKVVLRSPKTLAAMLISTALIAFNWGIFIWAIQNNKILSASLGYYINPLISILLGVMF 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K++L+ ++ A L ++ + G P ++L +A T+ Y RK + V S G
Sbjct: 120 FKDKLDRVKKAAVALCFCAVAFEVIQFGSLPWIALILATTFGFYGLVRKKVAVDSFTGMA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE +L AL Y++ + F + + L + F+ R L
Sbjct: 180 IETAILLPFALVYLILSDSPSANMFENTSTVNWLLFASG-PITMVPLMCFAAAANRVSLV 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
T+G +Y P M + +VF+ +P+ + F ++ A+ + ++ ++ K K+ K
Sbjct: 239 TLGFFQYIGPTGMFILAVFLYGEPLSPEKLTTFVLIWSALAMLIVDSIRRIRKTKSAK 296
>gi|194291216|ref|YP_002007123.1| predicted permease rard [Cupriavidus taiwanensis LMG 19424]
gi|193225051|emb|CAQ71062.1| putative predicted permease rarD [Cupriavidus taiwanensis LMG
19424]
Length = 301
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 147/291 (50%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L+ AYI+WG+ PLY + L ++ +E++ HR++WSL + + + + L
Sbjct: 3 LGILYALLAYIIWGLLPLYIKSLPGIAPVEILLHRMVWSLVFLGLIL-AWRRQWAWLGQV 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
++ + + SA +L +W +I+A+ + S YF+ P+ SV LG VFL ERL
Sbjct: 62 ARDRRLLLSFAASAALLCANWFLYIWAVSANRVVDASLGYFINPLFSVLLGVVFLHERLR 121
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q +A + + +T+ +G P ++L +A ++ Y RKT +G+ EG +E +L
Sbjct: 122 RMQWLAIAVAAAGVAWLTVAAGQLPWIALGLAASFGGYGLLRKTGALGALEGLSLETLLL 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + W +G + F L+ G + + F+ G +R LS +G+++
Sbjct: 182 FPLAAAALAWLFATGQDSFTHAAPGTQWLLLLAGPVTAVPLLFFAAGARRIPLSLLGLLQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
YT P L ++ V++ +P + + + ++ +++ +Y + + + K
Sbjct: 242 YTGPTLQLLLGVWLWNEPFPAQKQVGYALIWLSLALYAAEGLWMNARQKPA 292
>gi|84516841|ref|ZP_01004199.1| possible transporter, RarD, DMT superfamily [Loktanella
vestfoldensis SKA53]
gi|84509309|gb|EAQ05768.1| possible transporter, RarD, DMT superfamily [Loktanella
vestfoldensis SKA53]
Length = 307
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 92/303 (30%), Positives = 175/303 (57%), Gaps = 4/303 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ N P G AY++WG PLY + L V EVI+HRV+WS+P ++
Sbjct: 1 MTATNEDSPR--GLALAVTAYVMWGFLPLYMKALAHVPPTEVIAHRVIWSVPIAAVILLA 58
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ ++ + +P+ +GM +A +++V+WG +++A+ + + Y++ P+ SV
Sbjct: 59 MGRT-ADIRAAVSSPRTLGMAAVTAALISVNWGIYVWAIGSGHALDAALGYYINPLFSVA 117
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGS 192
LG++ L ER Q+ A L ++++++T+ +G IP+ +L + +W Y + +K++PVG
Sbjct: 118 LGALLLGERPRGAQLFAIALAAIAVVVLTVAAGKIPIAALGLTFSWGFYAYFKKSLPVGP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++GFF+E+ +L AL + W +G HF G+ PDT L+ GL+ + I++ G K
Sbjct: 178 AQGFFLEVLLLTPLALAIIAWTFVNGQSHFANGSAPDTWLLLSAGLVTALPLIIYATGAK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+LST+G+++Y AP ++ +++VFI +P T R I F ++ A+V+Y + + S + +
Sbjct: 238 LLRLSTIGVLQYIAPTMIFLTAVFIFDEPFGTARMIAFPMIWAALVIYTVSLIRQSRRKR 297
Query: 313 TKK 315
+
Sbjct: 298 HAE 300
>gi|82546170|ref|YP_410117.1| hypothetical protein SBO_3831 [Shigella boydii Sb227]
gi|187731753|ref|YP_001882517.1| RarD protein [Shigella boydii CDC 3083-94]
gi|81247581|gb|ABB68289.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|187428745|gb|ACD08019.1| RarD protein [Shigella boydii CDC 3083-94]
gi|320186207|gb|EFW60946.1| Protein rarD [Shigella flexneri CDC 796-83]
gi|332088513|gb|EGI93629.1| hypothetical protein SB359474_4474 [Shigella boydii 3594-74]
Length = 301
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMLLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRKRV 296
>gi|88706957|ref|ZP_01104655.1| conserved hypothetical protein, membrane [Congregibacter litoralis
KT71]
gi|88698768|gb|EAQ95889.1| conserved hypothetical protein, membrane [Congregibacter litoralis
KT71]
Length = 306
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 77/296 (26%), Positives = 149/296 (50%), Gaps = 3/296 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
E + G F AY LWG+ P+Y + LE V+ E++ HR++W++P I+
Sbjct: 5 EQQAAELRSGIFFGLAAYGLWGVFPIYFKLLETVTPTEILLHRIVWAVPF-GALIITLRR 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + ++P+ + L SA ++ +W +I+ ++ + F S Y++ P++ V +G
Sbjct: 64 QWTDVANAFRDPRVIAWLALSALCISGNWFVYIWGVVNERIFEASLGYYINPLMYVAVGV 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+F ERL Q++A L + +L++++ G+P +SL++A ++AY RK + + + G
Sbjct: 124 LFFGERLRRAQLLAVALATIGVLVLSVQGSGLPWVSLSLAALFTAYGIIRKRVAIAAMPG 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F E +L A ++W S F + + L+ G + F F+ +R
Sbjct: 184 LFAETALLFPLAGAGLLWLMLSHRAEFAAADGSTNMLLLLSGPITVFPLLFFAVAARRLT 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
L+TVG M++ AP + + +P T R I F ++ A++V+ + + S K
Sbjct: 244 LTTVGFMQFLAPTMQFFIA-MYFGEPFTTPRMICFALIWAAVIVFSVDALHTSRKR 298
>gi|217971613|ref|YP_002356364.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS223]
gi|217496748|gb|ACK44941.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS223]
Length = 294
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L AY +WG PLY + L VS E++ HRV+WS + + + G S L+
Sbjct: 7 RKGILLAVSAYCMWGFAPLYFKLLNHVSATEILLHRVIWSFVFMLIIMQFIGG-FSRLRL 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG +FL ERL
Sbjct: 66 LFKQPKQLMVLTITSILIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LQ A L +LI + G IP++SLA+A T+ Y RK + V + G +E V
Sbjct: 126 RKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGFYALLRKKVNVDAKAGLLVETAV 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL Y+V + + L L+ G++ + F+ R LS +G
Sbjct: 186 LLPVALIYLVATLDTATASMLTNDWQLNLMLMAAGIVTTIPLLCFAGAAVRIPLSMLGFF 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+Y P +M + +V + +P D + + FG + A++V+ L
Sbjct: 246 QYIGPSIMFILAVSLFNEPFDAEKCVTFGFIWSALLVFTLDMAYKRK 292
>gi|325003261|ref|ZP_08124373.1| putative integral membrane protein [Pseudonocardia sp. P1]
Length = 310
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 70/291 (24%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G AY++WG+ P + L+ + +EV++HR++W+ + + G L +
Sbjct: 19 KGLATGVTAYVIWGLFPAFWPLLDPAAPVEVLAHRIVWTAVLMSVVLTVLRGWSDLRRLD 78
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L+ A +A +AV+WG FI+ + + + Y++TP++ V LG V L+ERL
Sbjct: 79 LRGWCATAA---AAVFIAVNWGMFIWGVSVGRVVEAALGYYMTPLVGVLLGVVVLRERLR 135
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q +A L ++++ ++ +G P LS+ +A ++ Y + T+ + ++ E VL
Sbjct: 136 PMQWVALALAVVAVGVIAFGNGEVPWLSMVLAGSFGIYGLFKATVRLPAATSLTAEGLVL 195
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+PA Y++ +G F L ++ G + ++ +R LST+G++
Sbjct: 196 LVPATIYLLVLESAGSGTFVSLGPWHLLLMLSAGPATALPLFLYGSAARRLPLSTLGVLL 255
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P L + V ++ + + R F +V +A+VV+ + V + +
Sbjct: 256 YINPTLQFLWGVLVVGEAMPPTRWAGFVLVWLALVVFTIDLVRRARRAPVA 306
>gi|153836476|ref|ZP_01989143.1| RarD protein [Vibrio parahaemolyticus AQ3810]
gi|149750378|gb|EDM61123.1| RarD protein [Vibrio parahaemolyticus AQ3810]
gi|328470544|gb|EGF41455.1| putative chloramphenicol-sensitive protein RarD [Vibrio
parahaemolyticus 10329]
Length = 301
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 1/289 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++++WG+ P+Y +FL ++ E+++ R++ S+P + +
Sbjct: 7 GNFMAALSFVIWGLLPVYYRFLPNAAMDELLAWRIIGSVPVGILIVYAVTRHWPNWSQVW 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ K++ +++++ + W F +AL + S +F+ P++SV LG L ++L+
Sbjct: 67 RDKKSLWYTFVASSLMCISWSAFTWALTHHRVIDASLGFFIGPLVSVALGVFVLGDKLSK 126
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q+IA LL +L G P ++L + + ++ Y +K I S FIE VLA
Sbjct: 127 GQLIAILLATCGVLYQVFQYGQLPFVALTMGLFFALYGLYKKKINYDWSTTLFIEALVLA 186
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL Y+++ ++ GE + L G + +S I+ LSTVG+M+Y
Sbjct: 187 PFALGYLLFKQWTTGELASSVDTTTLLLYFGSAPITILPLIFYSIAIRITNLSTVGLMQY 246
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P L + +V + D V+ + F + + +++ + V K K
Sbjct: 247 IEPSLQFILAVVFFGELFDDVKAVTFAFIWVGLLLTIFEGVAKGIKRKK 295
>gi|146279259|ref|YP_001169417.1| hypothetical protein Rsph17025_3228 [Rhodobacter sphaeroides ATCC
17025]
gi|145557500|gb|ABP72112.1| hypothetical protein Rsph17025_3228 [Rhodobacter sphaeroides ATCC
17025]
Length = 317
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 94/289 (32%), Positives = 172/289 (59%), Gaps = 2/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P+Y + L V EV++HRV+WS+P + LS L+
Sbjct: 30 SPRGMAFALSAYLLWGFMPIYMKALAHVPAYEVVAHRVIWSVPVALAVLAALGR-LSELQ 88
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++PK + M +A +++V+WG +++A+ T+ Y++ P+ SVFLG+V L ER
Sbjct: 89 AALRSPKLLLMAAATAALISVNWGIYVWAIGAGHALDTALGYYINPLFSVFLGAVLLGER 148
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQ+ A L + +++++T+ +G P +++++ +TW Y + +K++P+G ++GF +E+
Sbjct: 149 LGRLQLAAIALAVAAVVVLTVEAGRLPFVAISLTLTWGGYAYLKKSLPLGPNQGFLLEVL 208
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L +PAL V W G HF G++ D L+G GL+ + +++ G K KLST+G
Sbjct: 209 ILLVPALAVVGWVESRGEGHFLHGSLADQALLLGTGLVTATPLMLYANGAKLLKLSTIGF 268
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++Y AP L+ +++VF+ + I F ++ +A+V++ + V S +
Sbjct: 269 LQYVAPTLIFLTAVFVFGEAFGRAEAIAFPMIWVALVIFTVALVRTSRR 317
>gi|170728873|ref|YP_001762899.1| transporter DMT superfamily protein [Shewanella woodyi ATCC 51908]
gi|169814220|gb|ACA88804.1| RarD protein, DMT superfamily transporter [Shewanella woodyi ATCC
51908]
Length = 296
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 89/291 (30%), Positives = 146/291 (50%), Gaps = 2/291 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S G CAY LWG PLY + L+QVS E++ HRV+WS V ++ F G S
Sbjct: 3 SSEQNKGIASAICAYTLWGFAPLYFKLLDQVSATEILIHRVIWSFIFVTLLMMMFGG-FS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ LK PK + +L ++ ++A +W FI+A+ S YF+ P+++V LG VFL
Sbjct: 62 RLRQVLKRPKQLMVLTLTSVLIAGNWLLFIWAVNNDHMLDASLGYFINPLVNVMLGMVFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL LQ +A +L +L+ + G IPL+SL +A ++ Y RK + V + G +
Sbjct: 122 SERLRKLQWLAVILAGTGVLVQLISFGSIPLVSLGLASSFGLYGLLRKKVNVDAKTGLLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E +L AL Y+ N + + L L+ G++ + F+ R LS
Sbjct: 182 ETAILFPIALLYLFANFGDSMTNLMSNELSLNLLLMAAGVVTTIPLLCFAAAAVRIPLSM 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+G +Y P +M + ++ + +P D + I FG + A++++ +
Sbjct: 242 LGFFQYIGPSIMFIMAITLYNEPFDLEKGITFGFIWSALIIFTIDMFYKRK 292
>gi|28900605|ref|NP_800260.1| putative chloramphenicol-sensitive protein RarD [Vibrio
parahaemolyticus RIMD 2210633]
gi|260365483|ref|ZP_05778020.1| protein RarD [Vibrio parahaemolyticus K5030]
gi|260877547|ref|ZP_05889902.1| protein RarD [Vibrio parahaemolyticus AN-5034]
gi|260897511|ref|ZP_05906007.1| protein RarD [Vibrio parahaemolyticus Peru-466]
gi|28808985|dbj|BAC62093.1| putative chloramphenicol-sensitive protein RarD [Vibrio
parahaemolyticus RIMD 2210633]
gi|308087094|gb|EFO36789.1| protein RarD [Vibrio parahaemolyticus Peru-466]
gi|308090944|gb|EFO40639.1| protein RarD [Vibrio parahaemolyticus AN-5034]
gi|308114408|gb|EFO51948.1| protein RarD [Vibrio parahaemolyticus K5030]
Length = 301
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 1/289 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++++WG+ P+Y +FL ++ E+++ R++ S+P + +
Sbjct: 7 GNFMAALSFVIWGLLPVYYRFLHNAAMDELLAWRIIGSVPVGILIVYAVTRHWPNWSQVW 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ K++ +++++ + W F +AL + S +F+ P++SV LG L ++L+
Sbjct: 67 RDKKSLWYTFVASSLMCISWSAFTWALTHHRVIDASLGFFIGPLVSVALGVFVLGDKLSK 126
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q+IA LL +L G P ++L + + ++ Y +K I S FIE VLA
Sbjct: 127 GQLIAILLATCGVLYQVFQYGQLPFVALTMGLFFALYGLYKKKINYDWSTTLFIEALVLA 186
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL Y+++ ++ GE + L G + +S I+ LSTVG+M+Y
Sbjct: 187 PFALGYLLFKQWTTGELASSVDTTTLLLYFGSAPITILPLIFYSIAIRITNLSTVGLMQY 246
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P L + +V + D V+ + F + + +++ + V K K
Sbjct: 247 IEPSLQFILAVVFFGELFDDVKAVTFAFIWVGLLLTIFEGVAKGIKRKK 295
>gi|300692413|ref|YP_003753408.1| permease, rarD-like [Ralstonia solanacearum PSI07]
gi|299079473|emb|CBJ52148.1| putative permease, rarD-like [Ralstonia solanacearum PSI07]
Length = 298
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G +F F AY +WG+ PLY + L+ V+ LE++SHRV+WSL + ++
Sbjct: 1 MSAHVRGGVIFAFLAYTMWGLFPLYFKLLKTVTPLEILSHRVIWSLAVMV-VVLAIKRHW 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L + P+ VG + S +LA++W +I+A+ S YF+ P++ V L +
Sbjct: 60 AWLWALRRQPRVVGRHLASTGMLALNWCTYIWAVNHDHVIDASLGYFINPLVVVMLALLV 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL Q A L + +T +G P +SLA+A T+ Y RKT P+G+ EG
Sbjct: 120 LGERLRPAQWCAVALAAAGVAWLTWQAGHLPWISLALATTFGLYGLLRKTSPLGALEGLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL Y+ W F L L G L + +F G +R LS
Sbjct: 180 LETLLLFPAALAYLGWLAVQQQNVFLAAPAGIQLLLALAGPLTAVPLLLFGAGARRIPLS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G+++Y +P L ++ V++ +P + + +G++ + Y + +
Sbjct: 240 LLGLLQYVSPTLQLLLGVWLYHEPFGGPKVVGYGLIWCGLAAYSAEGWMRLRRR 293
>gi|239929574|ref|ZP_04686527.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 326
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/278 (28%), Positives = 144/278 (51%), Gaps = 2/278 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E ++ +G L F AY +WG+ PL+ LE +E+++HR++WSL V A++
Sbjct: 2 TEKSAAERRIGLLNGFAAYGMWGLVPLFWPLLEPAGAVEILAHRMVWSLFFVGAALLVVR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ L + L+ P+ + ++ +AT++ V+WG +I+A+ + S YF+ P++++ +G
Sbjct: 62 R-WAWLGELLRQPRRLALITVAATVITVNWGVYIWAVNSGHVVEASLGYFINPLVTIAMG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSE 194
+ LKERL Q A + ++L++T+ G P +SL +A++++ Y +K + +G E
Sbjct: 121 VLLLKERLRSAQWAAVGVGASAVLVLTVGYGHPPWISLCLALSFATYGLVKKKVDLGGVE 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
E V +PAL Y++W G GG F L G++ + F R
Sbjct: 181 SLAAETAVQFLPALGYLLWLGARGGSTFTTEGAGHVALLASTGIVTALPLVCFGTAAIRV 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
LST+G+++Y P+ + V K+ + R F +
Sbjct: 241 PLSTLGLLQYMTPVFQFLLGVLYFKEAMPPERWAGFAL 278
>gi|311281504|ref|YP_003943735.1| RarD protein, DMT superfamily transporter [Enterobacter cloacae
SCF1]
gi|308750699|gb|ADO50451.1| RarD protein, DMT superfamily transporter [Enterobacter cloacae
SCF1]
Length = 297
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 2/296 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIHYVPADEILTHRVIWSFFFMV-ALITVSRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK + PK + +L SA ++ +W FI+A+ S YF+ P++++ LG VFL
Sbjct: 62 GLKKLWQTPKKILLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMVFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A LL +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVLLAACGVLVQLWTFGSLPVIALGLAFSFAFYGLVRKKIAVDAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A ++ S H L L+ G++ + F+ + +LST
Sbjct: 182 ETLWLLPVAAIWLFGIADSPTSHLTQNPWSLNLLLMAAGIVTTVPLLCFTGAATKLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G +Y P LM + +V + + + + FG + A+ ++++ V +
Sbjct: 242 LGFFQYIGPTLMFLLAVMFYGETPGSDKMVTFGFIWAALAIFIMDAVYTLHRTPKS 297
>gi|27467168|ref|NP_763805.1| rarD protein [Staphylococcus epidermidis ATCC 12228]
gi|27314710|gb|AAO03847.1|AE016744_250 rarD protein [Staphylococcus epidermidis ATCC 12228]
gi|319400427|gb|EFV88661.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
Length = 300
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/302 (25%), Positives = 146/302 (48%), Gaps = 7/302 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G AYILWGI P+Y + ++++ E+++ R+++S+ + F ++
Sbjct: 1 MSSEYKKGIFLALGAYILWGILPIYWRLIDEIGAFEILAFRIIFSVIFMIFVLIIGKNQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + +P + ++ + ++ V+WG FI+A+ +S Y++ P++S+ L
Sbjct: 61 NAFFRDVNQLVSHPVQLIAIIVAGYVITVNWGTFIWAVSNGHVLQSSLGYYINPLVSIVL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A + ++ +L MT+ G P +SL +A ++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAIIFALVGVLYMTIKIGEFPFISLLLAFSFGIYGLLKKIVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQQHITFGLNISSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS G ++Y P +M + +F+ K+P +T + I F + I +V+Y + + KN
Sbjct: 239 IPLSLTGFIQYVGPTIMFILGIFVFKEPFNTDQLITFIFIWIGIVLYSISQYVQIKKNPV 298
Query: 314 KK 315
K
Sbjct: 299 VK 300
>gi|239637116|ref|ZP_04678108.1| protein RarD [Staphylococcus warneri L37603]
gi|239597248|gb|EEQ79753.1| protein RarD [Staphylococcus warneri L37603]
gi|330685028|gb|EGG96702.1| protein RarD [Staphylococcus epidermidis VCU121]
Length = 300
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 73/298 (24%), Positives = 134/298 (44%), Gaps = 7/298 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G F AY+LWGI P+Y + + + E+++ R+++S + F ++
Sbjct: 1 MNNEYKKGIFFALGAYVLWGILPIYWELIHHIGAFEILAFRIIFSAIFMIFILIIGKNQR 60
Query: 79 SLLKDTLKNPKAVGML----VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + V + ++ ++WG FI+A+ +S Y++ P++S+ L
Sbjct: 61 QAFIRDVNQLVTHPIQLVAIVVAGYVITINWGTFIWAVTNGHVLQSSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++SL +A ++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKVGEFPIVSLMLAFSFGIYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+E V A L YV + F + L G + +FS G KR
Sbjct: 181 SSITVECIVTAPAGLIYVGYLWQQHQLSFGMNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
LS G ++Y P +M V +F+ +P D + I F + I +V+Y + +
Sbjct: 239 IPLSLTGFIQYVGPTIMFVLGIFLFNEPFDINQLITFIFIWIGIVLYSTSQYLKMKRR 296
>gi|258510826|ref|YP_003184260.1| RarD protein, DMT superfamily transporter [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477552|gb|ACV57871.1| RarD protein, DMT superfamily transporter [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 307
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/295 (21%), Positives = 137/295 (46%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + F AY WG+ P Y E++S E++S+R+++S ++ + S
Sbjct: 1 MTDRKGLWYAFLAYAGWGLLPAYWNVFERMSPYELLSYRMVFSALTIWIWVAIARRAQS- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +++ + ++ + ++ V+W FI A+ T +S Y++ P+++V LG + +
Sbjct: 60 VAGVMRDGRRARLMALGSLMITVNWLTFIVAVNTGHVVESSLGYYINPIVNVLLGLLLFR 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL+ Q A ++ + + IM G P L+LA+A ++ Y +K + + + E
Sbjct: 120 ERLDGWQWGALVVAMAGVGIMMAAYGQVPWLALALAGSFGLYGVVKKRVDADAVQSLTWE 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A Y+ + L+ GL + +F+ KR L+T+
Sbjct: 180 TTLALPLAAAYLAATFATHRVTVTQLTSWQMALLVLSGLFTAVPLLLFAMAAKRLSLATL 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+++Y +P L +V + + + I F + +A+ +Y + V N +++ +
Sbjct: 240 GMVQYISPTLQLVIGLAVDHEAFTRADAIGFACIWMALALYTISLVRNERRHRHR 294
>gi|157144444|ref|YP_001451763.1| hypothetical protein CKO_00158 [Citrobacter koseri ATCC BAA-895]
gi|157081649|gb|ABV11327.1| hypothetical protein CKO_00158 [Citrobacter koseri ATCC BAA-895]
Length = 297
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMIALMSI-SRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K L+ PK + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 GVKTLLQTPKKIFMLALSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAACGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGQNPLSLNLLLIAAGIVTTVPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEIPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|328544353|ref|YP_004304462.1| RarD protein, DMT superfamily transporter [polymorphum gilvum
SL003B-26A1]
gi|326414095|gb|ADZ71158.1| RarD protein, DMT superfamily transporter [Polymorphum gilvum
SL003B-26A1]
Length = 305
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 87/295 (29%), Positives = 152/295 (51%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G LF AY LWG+ P Y + + +S +++HRV+WS+ V + Y L
Sbjct: 10 AQSELRTGVLFALAAYGLWGVLPAYFKLIGSISADVIVAHRVIWSMVFVGGYLAYQGR-L 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L+ P+ VG+L+ SA I+ +W F++A+ + S YF+ P++SV +G V
Sbjct: 69 REILAILRTPRLVGLLLCSALIIGGNWLVFVWAIGENRVLDISLGYFINPLVSVVIGLVV 128
Query: 139 LKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL+ +Q IA L I +++I L G+P + L +AV+++AY + RK PVG++ G
Sbjct: 129 LGERLSRIQTIAVGLAIAAVMIKTVLFGGLPWVGLVLAVSFAAYGYLRKVTPVGATAGML 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E+ +L A+ Y+ + L + L G GL+ + FS +R L
Sbjct: 189 VEILLLLPLAVLYIALVVPESVDPANLESPWLMPALAGAGLVTAVPLIFFSAAARRLPLV 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G+++Y AP L + +VF+ +P+D + F ++ A+ + + +
Sbjct: 249 IMGLLQYLAPSLQFLQAVFVWGEPLDPAQLGTFAMIWAALALVSAESWRRMRAGR 303
>gi|326777326|ref|ZP_08236591.1| RarD protein, DMT superfamily transporter [Streptomyces cf. griseus
XylebKG-1]
gi|326657659|gb|EGE42505.1| RarD protein, DMT superfamily transporter [Streptomyces cf. griseus
XylebKG-1]
Length = 348
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 73/294 (24%), Positives = 149/294 (50%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L+ AY +WG+ PL+ L+ +E+++HR++WSL V A++ +
Sbjct: 4 KNEQRAGLLYGIGAYGMWGLVPLFWPLLKPSGAVEILAHRMVWSLGVVAVALLVVHR-WA 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +++ + +G++ +A ++V+WG +I+A+ S YF+ P++++ +G + L
Sbjct: 63 WIGELVRDRRKLGLISVAAATISVNWGLYIWAVNNGHVVEASLGYFINPLVTIAMGVLLL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL +Q A ++++L++ + G P +SL +A +++ Y +K + +G E
Sbjct: 123 GERLRPVQWAAVATGLVAVLVLAIGYGKPPWISLVLAFSFATYGLVKKKVGMGGLESLAA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E VL +PAL +++W +GG F G L G++ + F R LST
Sbjct: 183 ETAVLFVPALGFLLWLAATGGSTFTAGGAGHGFLLAATGIVTAVPLICFGAAAVRVPLST 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G+++Y AP+ V + + R F +V +A+ + + + +N+
Sbjct: 243 LGLLQYLAPVFQFGLGVLYFDESMPPERWAGFALVWLALALLTWDALRTARRNR 296
>gi|86139409|ref|ZP_01057978.1| RarD [Roseobacter sp. MED193]
gi|85823912|gb|EAQ44118.1| RarD [Roseobacter sp. MED193]
Length = 301
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 167/295 (56%), Gaps = 5/295 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
T G F AY+LWG PLY + + + EV++HRVLWS+P +V L+
Sbjct: 11 TPQGLAFAISAYVLWGFLPLYMKLVAHIPAAEVVAHRVLWSVPVAGLLLVVLGRT-KELR 69
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
LK+P+ +GM +A +++V+WG +++++ T + Y++ P+ S+ LG+V L+ER
Sbjct: 70 AALKSPRTLGMACVTAALISVNWGIYVWSIATGHALDAALGYYINPLFSIALGAVLLRER 129
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L Q++A L +++++T+ +G P +++A+ ++W Y F +K +PVG ++GF +E+
Sbjct: 130 LTPTQLLAIGLAAAAVVVLTVEAGRLPWVAIALTLSWGFYAFFKKQLPVGPNQGFMLEVL 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L PAL Y+ + +GG HF +I + +++ G K +LST+GI
Sbjct: 190 ILTPPALGYLAYMSVTGGTHFQGVDIWLLMGCGLVTA---VPLIVYANGAKLLRLSTIGI 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++Y AP ++ + +VF+ + R I F ++ A+V+Y +P + +N ++
Sbjct: 247 LQYIAPTMIFLIAVFVFGEEFGRARMIAFPMIWAALVIYSIPLIRQLRQNPKAQA 301
>gi|319784474|ref|YP_004143950.1| RarD protein, DMT superfamily transporter [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317170362|gb|ADV13900.1| RarD protein, DMT superfamily transporter [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 308
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 97/293 (33%), Positives = 179/293 (61%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G L AY+LWG+ P Y + + + + EVI+HR++WS+P +++
Sbjct: 10 AESKARRGFLLALGAYLLWGLLPFYMKAVAHLPLAEVIAHRIVWSVPIAAAVLIWAGRT- 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K L++P+ + M +A +++V+WG +++A+ + T+ Y++ P++SV +G++
Sbjct: 69 ADFKAALRSPRTIAMAALTAALISVNWGIYVWAIAVDRTVETALGYYINPLVSVVVGALL 128
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL+ LQI A +L +++ ++T+ G P +SLA+A +++AY F RKT+P+G S+GF
Sbjct: 129 LGERLDRLQIAAVVLAAVAVAVLTIEGGKLPWVSLALAFSFAAYGFFRKTLPIGPSQGFL 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E+ +L++PAL Y+V+ +G +H + DT LIG G + S +F++G K +LS
Sbjct: 189 LEVLLLSVPALGYIVYLIATGQDHIVSSSGTDTALLIGCGPVTSVPLLLFAFGAKLLRLS 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+GIM+Y AP ++ + +V I +P T++ I F ++ A+ VY + + +
Sbjct: 249 TIGIMQYIAPTMVFLIAVLIFDEPFGTIQAIAFALIWAALAVYSWSMLTTARR 301
>gi|313673095|ref|YP_004051206.1| rard protein, dmt superfamily transporter [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939851|gb|ADR19043.1| RarD protein, DMT superfamily transporter [Calditerrivibrio
nitroreducens DSM 19672]
Length = 295
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 87/294 (29%), Positives = 160/294 (54%), Gaps = 2/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L AY LWG+ P+Y +FL+ V+ E++ HR++WS + ++ L
Sbjct: 2 RESTKGFLSGLAAYSLWGVFPIYWKFLKAVNPFEIVFHRIIWSFLFLNLILLVHGQ-LKE 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK+ K + + S+ ++ +W +I+A+ T + TS Y++ P+ +V LG + LK
Sbjct: 61 SFTYLKDKKILKYFLISSLMIGSNWFLYIWAVNTDKILETSLGYYMAPIFNVLLGRIVLK 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ + IA +L++++LL M + P +S+ +A+T+S Y F RK +GS +G F+E
Sbjct: 121 EKMTKGRTIAFILVVIALLNMVIGLNHLPWVSVILAITFSYYGFLRKNGKLGSIQGLFVE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V+ IP+L ++++ F F + L LI G + F+Y +R + T+
Sbjct: 181 TFVMGIPSLLFIIYLSFINKSSFLTISYKIDLLLILSGPATAIPLLTFAYAARRLQFITL 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
GIM+Y AP + + F+ K+P+ I F ++ IA+V+Y+L + I + + +
Sbjct: 241 GIMQYLAPTIAFLIGAFLYKEPLSLKHMITFILIWIALVIYILDSYIITYRYQK 294
>gi|332139604|ref|YP_004425342.1| Conserved membrane protein RarD [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549626|gb|AEA96344.1| Conserved membrane protein RarD [Alteromonas macleodii str. 'Deep
ecotype']
Length = 310
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 148/291 (50%), Gaps = 3/291 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + AY +WG+ P+Y + L + E++ HRV+WS+ + I +
Sbjct: 17 GVICAIAAYSMWGVAPVYFKQLMVLPAAEILMHRVIWSVVLLVGFIAALKQ-WPKVGAAF 75
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+N + + +L + +L +W FI+A+ S Y++ P+I+VFLG +FL ERL +
Sbjct: 76 RNKRVMQILFVAGLLLGANWLLFIWAINNDHILDASLGYYINPLINVFLGRLFLGERLRN 135
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ +A L ++ + I+ G P ++L +A ++S Y RK + V S G FIE +L+
Sbjct: 136 LQRVAVGLAVVGVAILIFSYGHVPWIALVLAGSFSVYGLLRKQVAVDSLPGLFIETLMLS 195
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y ++ G F + ++ G++ + F+ +R ST+G +Y
Sbjct: 196 PLAIIYWLFFGSEYSNLFN-NDATLNTLILAAGIVTTAPLLCFTAAARRIMYSTLGFFQY 254
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P LM + +V++ +P++ R + FG V IA++++ +++N + +
Sbjct: 255 IGPTLMFILAVYLYGEPLEESRLVTFGFVWIALILFSADSLVNYRSQRKAQ 305
>gi|57865810|ref|YP_189880.1| rarD protein [Staphylococcus epidermidis RP62A]
gi|282876735|ref|ZP_06285591.1| protein RarD [Staphylococcus epidermidis SK135]
gi|57636468|gb|AAW53256.1| rarD protein [Staphylococcus epidermidis RP62A]
gi|281294386|gb|EFA86924.1| protein RarD [Staphylococcus epidermidis SK135]
gi|329732125|gb|EGG68479.1| protein RarD [Staphylococcus epidermidis VCU144]
gi|329735792|gb|EGG72072.1| protein RarD [Staphylococcus epidermidis VCU045]
Length = 301
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 146/301 (48%), Gaps = 7/301 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S G AYILWGI P+Y + ++++ E+++ R+++S+ + F ++ +
Sbjct: 3 SSEYKKGIFLALGAYILWGILPIYWRLIDEIGAFEILAFRIIFSVIFMIFVLIIGKNQRN 62
Query: 80 LLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +P + ++ + ++ V+WG FI+A+ +S Y++ P++S+ L
Sbjct: 63 AFFRDVNQLVSHPVQLIAIIVAGYVITVNWGTFIWAVSNGHVLQSSLGYYINPLVSIVLA 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FLKER N + +A + ++ +L MT+ G P +SL +A ++ Y +K + + +
Sbjct: 123 LIFLKERFNKFEWLAIIFALVGVLYMTIKIGEFPFISLLLAFSFGIYGLLKKIVHIDAIS 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
IE V A L YV++ F L L G + +FS G KR
Sbjct: 183 SITIECIVTAPAGLIYVIYLWQQQHITFGLNISSFWLLFSGAIT--AIPLILFSAGAKRI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS G ++Y P +M + +F+ K+P +T + I F + I +V+Y + + KN
Sbjct: 241 PLSLTGFIQYVGPTIMFILGIFVFKEPFNTDQLITFIFIWIGIVLYSISQYVQIKKNPVV 300
Query: 315 K 315
K
Sbjct: 301 K 301
>gi|242243478|ref|ZP_04797923.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis W23144]
gi|242233098|gb|EES35410.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis W23144]
Length = 318
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 146/301 (48%), Gaps = 7/301 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S G AYILWGI P+Y + ++++ E+++ R+++S+ + F ++ +
Sbjct: 20 SSEYKKGIFLALGAYILWGILPIYWRLIDEIGAFEILAFRIIFSVIFMIFVLIIGKNQRN 79
Query: 80 LLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +P + ++ + ++ V+WG FI+A+ +S Y++ P++S+ L
Sbjct: 80 AFFRDVNQLVSHPVQLIAIIVAGYVITVNWGTFIWAVSNGHVLQSSLGYYINPLVSIVLA 139
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FLKER N + +A + ++ +L MT+ G P +SL +A ++ Y +K + + +
Sbjct: 140 LIFLKERFNKFEWLAIIFALVGVLYMTIKIGEFPFISLLLAFSFGIYGLLKKIVHIDAIS 199
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
IE V A L YV++ F L L G + +FS G KR
Sbjct: 200 SITIECIVTAPAGLIYVIYLWQQQHITFGLNISSFWLLFSGAIT--AIPLILFSAGAKRI 257
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS G ++Y P +M + +F+ K+P +T + I F + I +V+Y + + KN
Sbjct: 258 PLSLTGFIQYVGPTIMFILGIFVFKEPFNTDQLITFIFIWIGIVLYSISQYVQIKKNPVV 317
Query: 315 K 315
K
Sbjct: 318 K 318
>gi|329732734|gb|EGG69082.1| protein RarD [Staphylococcus epidermidis VCU028]
Length = 301
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 78/301 (25%), Positives = 146/301 (48%), Gaps = 7/301 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S G AYILWGI P+Y + ++++ E+++ R+++S+ + F ++ +
Sbjct: 3 SSEYKKGIFLALGAYILWGILPIYWRLIDEIGAFEILAFRIIFSVIFMIFVLIIGKNQRN 62
Query: 80 LLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +P + ++ + ++ V+WG FI+A+ +S Y++ P++S+ L
Sbjct: 63 AFLRDVNQLVSHPVQLIAIIVAGYVITVNWGTFIWAVSNGHVLQSSLGYYINPLVSIVLA 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FLKER N + +A + ++ +L MT+ G P +SL +A ++ Y +K + + +
Sbjct: 123 LIFLKERFNKFEWLAIIFALIGVLYMTIKIGEFPFISLLLAFSFGIYGLLKKIVHIDAIS 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
IE V A L YV++ F L L G + +FS G KR
Sbjct: 183 SITIECIVTAPAGLIYVIYLWQQQHITFGLNISSFWLLFSGAIT--AIPLILFSAGAKRI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS G ++Y P +M + +F+ K+P +T + I F + I +V+Y + + KN
Sbjct: 241 PLSLTGFIQYVGPTIMFILGIFVFKEPFNTDQLITFIFIWIGIVLYSISQYVQIKKNPVV 300
Query: 315 K 315
K
Sbjct: 301 K 301
>gi|317123866|ref|YP_004097978.1| RarD protein, DMT superfamily transporter [Intrasporangium calvum
DSM 43043]
gi|315587954|gb|ADU47251.1| RarD protein, DMT superfamily transporter [Intrasporangium calvum
DSM 43043]
Length = 331
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 69/284 (24%), Positives = 138/284 (48%), Gaps = 4/284 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+GT F AY +WG+ PLY L+ S E+++HR+LW+L ++ + + ++
Sbjct: 29 LGTALAFAAYGIWGLFPLYFDALKPASAWEILAHRILWTLLF-CILLIAVTRDVHWVRPV 87
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L+ P+ + + +A ++A +W ++ + + YF+ P+++V LG V L ERL
Sbjct: 88 LRRPRLLAGITVAAVLIAANWVIYVSVVTAGHTSEAALGYFLNPLVTVALGVVVLGERLR 147
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LQ A + + + + + L SG + ++ + + + + G +E
Sbjct: 148 VLQWTAVAIGLAAGVYLALASGRVPYAAIALAMSFGLYSLTKKKVGASLQAVHGLTLETL 207
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+LA A+ +V G F T L+G G+ + F+ +R L ++G+
Sbjct: 208 ILAPAAVAILVLVSSRTGLEFGNHGPVHTWLLVGSGVATAVPLLFFAAAARRIPLVSIGL 267
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++ PL+ ++ +V +L + + R I FGIV +A+ V + +V
Sbjct: 268 IQFITPLMQLLVAVLLLGEVMSRERWIGFGIVWVALAVLSVDSV 311
>gi|324111041|gb|EGC05028.1| RarD protein [Escherichia fergusonii B253]
Length = 295
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + ++ S S
Sbjct: 3 TKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-VLMSISRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ PK + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPKKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETIWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|296105301|ref|YP_003615447.1| transporter DMT superfamily protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059760|gb|ADF64498.1| transporter DMT superfamily protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 298
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WG+ P Y +F+ V E+++HRV+WS + A++ S S
Sbjct: 3 AKQTRQGVLLALAAYFIWGVAPAYFKFIAYVPADEILTHRVIWSFFFM-IALMSVSRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K L+ PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 GVKTLLQIPKKIFLLALSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L +LI G P+++L +A +++ Y RK I V + G
Sbjct: 122 GERFRRMQWLAVILAFCGVLIQLWTFGSLPVIALGLAFSFAFYGLVRKKIAVEAQTGMLF 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFGIADSPTSHMGSNPWSLNVMLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ +++ + + +
Sbjct: 242 LGFFQYIGPTLMFLLAVVFYGEVPGADKMVTFAFIWVALAIFVADAIYTQRRVRK 296
>gi|296137295|ref|YP_003644537.1| RarD protein, DMT superfamily transporter [Thiomonas intermedia
K12]
gi|295797417|gb|ADG32207.1| RarD protein, DMT superfamily transporter [Thiomonas intermedia
K12]
Length = 307
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 83/285 (29%), Positives = 153/285 (53%), Gaps = 2/285 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++ AY++WG+ PLY + LEQV L++++HR+ WSL V + S ++
Sbjct: 4 GVVYALTAYVIWGLFPLYFKALEQVPSLQILAHRMAWSLLFVALLLAVLKR-WSWMRLLR 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P + SA +L+ +WG +I+A+ + S Y++ P+++V LGSV L ERL
Sbjct: 63 EQPALLARFALSAVLLSSNWGIYIWAVNSNHVVDASLGYYINPLVNVALGSVLLHERLRG 122
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ +A + + +M + G P +SL++A+T+ +Y RKT P+G+ EG +E VL
Sbjct: 123 LQWVALAIAAAGVTVMAIEVGHVPWISLSLALTFGSYALLRKTAPLGALEGLAVETAVLF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y+ W G F ++ L+ G + + +F+ G +R ++ +G+++Y
Sbjct: 183 PLAVAYLFWLSTQGMNAFASADLSTRWLLVAAGPVTTVPLLLFAAGARRMSMTLLGVLQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P L + V++ +P + + FG+V + + V+LL + +
Sbjct: 243 ITPTLQLALGVWLYHEPFAAAKMVGFGLVWVGLAVFLLDGLRAAW 287
>gi|332996972|gb|EGK16590.1| hypothetical protein SFVA6_4512 [Shigella flexneri VA-6]
Length = 302
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 2/297 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+G +Y P LM + +V + + + F + +A+ ++++ + + K
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRTSKSK 298
>gi|330998797|ref|ZP_08322525.1| protein RarD [Parasutterella excrementihominis YIT 11859]
gi|329576294|gb|EGG57810.1| protein RarD [Parasutterella excrementihominis YIT 11859]
Length = 299
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 143/286 (50%), Gaps = 2/286 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + V AY++WG+ P Y ++ V+ E++ HRVLW+ + + ++
Sbjct: 3 KGVVSVLVAYLIWGLYPFYFHAMQHVAPTEIVIHRVLWTFALLAVYLFCSRR-WRWIQKA 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + V + + S+ ++ +W + YA++T Q S YF+ P++SV LG+VFLKE+LN
Sbjct: 62 ITDRRTVAVFLMSSVLITANWSTYTYAIVTNQTLEASLGYFMNPLVSVLLGTVFLKEKLN 121
Query: 145 HLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q++A + ++ +T P L L +A+++ Y RK P+GS EG +E
Sbjct: 122 KAQMLAIVFACAGVMWVTFKQGEFPALGLTLALSFGFYGLVRKMAPLGSLEGLTLETAFA 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL + +G F G D +LI G + + +F+YG+K+ STVG ++
Sbjct: 182 FPVALLATFYFAGNGDLTFVHGTSWDKFWLIMAGPITTIPLILFAYGLKQVPYSTVGFIQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y +P ++ F + + R I F ++ +++++ S
Sbjct: 242 YLSPTMVFFIGPFFFGEELQVDRLIGFILIWAGVLIFVGENFFRSH 287
>gi|255326769|ref|ZP_05367845.1| RarD protein [Rothia mucilaginosa ATCC 25296]
gi|255295986|gb|EET75327.1| RarD protein [Rothia mucilaginosa ATCC 25296]
Length = 323
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/302 (20%), Positives = 128/302 (42%), Gaps = 4/302 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E T G + + YI+WG+ PLY + +E++ RV++SL +
Sbjct: 2 SETQKHTTRNGFITIIGTYIIWGLLPLYFVVMAPAGPIEIVVARVVFSLIFCALLLPIVR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + LK+ + + +L ++ ++ +W ++ A + S YF+ P++SV LG
Sbjct: 62 AT-ADFRRALKDRRIMLVLTAASFLICANWLIYVMATTSGHTIDASLGYFINPLVSVVLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGS 192
+FL+ERL Q ++ + +++L+M+L G + AR V
Sbjct: 121 VIFLQERLRAAQWVSVAISCIAVLMMSLIYGQVPWTGLGLAFSFGIYGLLKARVAHDVSP 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+E +LA + + G F L G++ +F+ K
Sbjct: 181 IVSLSLETLILAPFGIAALFVLNAQGQMTLFSEGAGHFWLLTSTGVVTVVPLMLFAAATK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
LS +G+++Y P + V ++ +L + + + + ++ IA++++ + V S +
Sbjct: 241 ALPLSVIGMVQYLGPTIQFVLALTVLHEQMSADKVLGLSLIWIALIIFTVDAVRASRSYR 300
Query: 313 TK 314
Sbjct: 301 AS 302
>gi|269104290|ref|ZP_06156986.1| hypothetical membrane protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160930|gb|EEZ39427.1| hypothetical membrane protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 302
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 73/295 (24%), Positives = 141/295 (47%), Gaps = 1/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G ++ILWGI PLY Q+L Q + E+++ R+++S+P + A++ L
Sbjct: 2 QSSRAGNALAAFSFILWGILPLYYQYLPQADINELLALRIIFSVPFMLIAMLLLGKKLPS 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + L + K++ M + ++ V W F +A+ Q S YF+ P+ ++ LG +FLK
Sbjct: 62 LSELLADKKSLIMCCIAGIVMCVSWYAFTWAMTHGQVLAASLGYFINPLFAISLGVIFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L+ Q+ A +L + G P L+L + ++ Y +K I + +E
Sbjct: 122 EKLSPAQLAAVVLAAAGISFQVWSYGTLPWLALVMGSFFAIYGLTKKYIKYDALTSVTLE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL A+ Y++++ SG + +G + F+ I R L+ V
Sbjct: 182 AVVLTPFAVIYMIYDYMSGSSVALTSGMSTFWLYVGSAPVTLAPLIFFALAINRTSLTMV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+M+Y P L ++ +VF+ + D + + FG + + +++ + + K K +
Sbjct: 242 GLMQYIEPTLQLLLAVFLFGEIFDHTKAVSFGFIWLGLILCGVEAMARYYKKKKR 296
>gi|218888051|ref|YP_002437372.1| RarD protein, DMT superfamily transporter [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|218759005|gb|ACL09904.1| RarD protein, DMT superfamily transporter [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 304
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/297 (26%), Positives = 158/297 (53%), Gaps = 2/297 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + T G A+ LWG+ PLY + ++QV E++ HR++WS+ + ++
Sbjct: 1 MPPQPEQRTTRAGLWGALGAFGLWGLLPLYWKLVQQVPSSEILCHRIVWSVMFLLPLVL- 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G L+ ++ L + +++ + S+ ++ +W +I+A+ + TS Y++TP+++
Sbjct: 60 LGGRLAEVRAALASRRSLATIAGSSLLIGGNWFLYIWAVNSDMVLETSLGYYMTPLVNAL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGS 192
LG++ L ER + +Q+ A ++ +L M + G P ++L +AV++S Y RK + V S
Sbjct: 120 LGALVLGERPSRVQLAAIVIAAAGVLSMLVSYGRLPWVALVLAVSFSFYGLLRKLVKVES 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G FIE +LA A+ Y+ W + GG + L L+G G+ S F++ +
Sbjct: 180 IPGLFIETMLLAPVAVGYLGWLAWQGGGALGHQGLATDLVLVGAGIATSTPLLCFAFAAR 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
R +L+T+G+M+Y AP + + F+ ++P+ + + FG + A+ +Y + +
Sbjct: 240 RLRLTTLGVMQYIAPSIAFLLGAFVFREPVTSAHLLTFGCIWTALALYTAEGLRAAR 296
>gi|87198958|ref|YP_496215.1| rarD protein [Novosphingobium aromaticivorans DSM 12444]
gi|87134639|gb|ABD25381.1| rarD protein [Novosphingobium aromaticivorans DSM 12444]
Length = 295
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N S G AY+ WG+ PLY + L V +E+I R+L++LP V IV
Sbjct: 2 NHSSTFRRGLTAAVAAYVAWGLLPLYFRALHDVPPVELIGWRILFTLP-VCLVIVAARRQ 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ NP+ + L SA ++ +W F+ A+ TS Y++ P+I+V LG++
Sbjct: 61 GPDVRAAFANPRVLLQLAISAALIGANWLIFVIAINEGHVLATSLGYYINPLINVLLGTM 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L ERL+ +Q A L + ++ ++++++A+T++ Y + RK PVGS G
Sbjct: 121 LLGERLSRVQWTAVGLAGAGIALLLAGALDTLIVAMSLALTFAFYGYVRKKAPVGSVPGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E +LA+PAL V S P L L G+ + +F+ + L
Sbjct: 181 TVETALLALPALVVVWIWAGSPAGSSMAPGSPSALLLAFSGVATAIPLLLFAVAARALPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
ST+G +++ AP + + + + +D R F ++ A+ +Y + +
Sbjct: 241 STLGFVQFIAPTISFTLGLTVFGESLDPARLGCFALIWSAIALYSWDMLRRAR 293
>gi|251811581|ref|ZP_04826054.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis BCM-HMP0060]
gi|293367435|ref|ZP_06614093.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
epidermidis M23864:W2(grey)]
gi|251804959|gb|EES57616.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis BCM-HMP0060]
gi|291318381|gb|EFE58769.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
epidermidis M23864:W2(grey)]
Length = 318
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/301 (25%), Positives = 144/301 (47%), Gaps = 7/301 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S G AYILWGI P+Y + ++++ E+++ R+++S+ + F ++ +
Sbjct: 20 SSEYKKGIFLALGAYILWGILPIYWRLIDEIGAFEILAFRIIFSVIFMIFVLIIGKNQRN 79
Query: 80 LLKDTLKNPKAVGML----VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + ++ V+WG FI+A+ +S Y++ P++S+ L
Sbjct: 80 AFFRDVNQLVSHPVQLIAIIVAGYVITVNWGTFIWAVSNGHVLQSSLGYYINPLVSIVLA 139
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FLKER N + +A + ++ +L MT+ G P +SL +A ++ Y +K + + +
Sbjct: 140 LIFLKERFNKFEWLAIIFALVGVLYMTIKIGEFPFISLLLAFSFGIYGLLKKIVHIDAIS 199
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
IE V A L YV++ F L L G + +FS G KR
Sbjct: 200 SITIECIVTAPAGLIYVIYLWQQQHITFGLNISSFWLLFSGAIT--AIPLILFSAGAKRI 257
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS G ++Y P +M + +F+ K+P +T + I F + I +V+Y + + KN
Sbjct: 258 PLSLTGFIQYVGPTIMFILGIFVFKEPFNTDQLITFIFIWIGIVLYSISQYVQIKKNPVV 317
Query: 315 K 315
K
Sbjct: 318 K 318
>gi|282902609|ref|ZP_06310502.1| RarD protein [Staphylococcus aureus subsp. aureus C160]
gi|282918052|ref|ZP_06325802.1| RarD protein [Staphylococcus aureus subsp. aureus D139]
gi|282921270|ref|ZP_06328988.1| RarD protein [Staphylococcus aureus subsp. aureus C427]
gi|283767771|ref|ZP_06340686.1| chloramphenicol-sensitive protein RarD [Staphylococcus aureus
subsp. aureus H19]
gi|282315685|gb|EFB46069.1| RarD protein [Staphylococcus aureus subsp. aureus C427]
gi|282318337|gb|EFB48697.1| RarD protein [Staphylococcus aureus subsp. aureus D139]
gi|282597068|gb|EFC02027.1| RarD protein [Staphylococcus aureus subsp. aureus C160]
gi|283461650|gb|EFC08734.1| chloramphenicol-sensitive protein RarD [Staphylococcus aureus
subsp. aureus H19]
Length = 302
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++ + E+++ R+++S+ + F +
Sbjct: 1 MNTEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSVIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 HAFQRDMNQLLAKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSLDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKN 301
>gi|300313990|ref|YP_003778082.1| permease [Herbaspirillum seropedicae SmR1]
gi|300076775|gb|ADJ66174.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 298
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 76/291 (26%), Positives = 151/291 (51%), Gaps = 2/291 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L+ A ILWG+ PLY + L+++ +++ HR+ WS + + + + + +K
Sbjct: 1 MLYAVAASILWGLFPLYFKLLKEIPSFDIVVHRLFWSCVFLVAVLTW-RRQWRWVGEVVK 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P VG + SA +L +W +++A+ + TS YF++P++SVF+G + LKER+ L
Sbjct: 60 RPMVVGGFLLSALLLTGNWTLYVWAVNAGRIVDTSLGYFMSPLMSVFMGYLILKERMRPL 119
Query: 147 QIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q +A L + +++ +T+ + +P +SL IA++++ Y RKT +G+ EG +E ++
Sbjct: 120 QWLAVFLALGAVIWLTIANGSLPWVSLLIALSFAFYGLLRKTAHLGALEGLSLETLLMLP 179
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L + + F + + L G + + +F++G +R LS +G+M+Y
Sbjct: 180 LVLLVLGVDTLRDSNAFTHASTSARILLALSGPITAVPLLLFAHGARRIPLSMLGLMQYI 239
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+P + ++ V I + R I F ++ A+ VY + + + + S
Sbjct: 240 SPTIQLLGGVLIYGEAFTGARAIGFCVIWAALAVYSAEGLWRYLRTRAQSS 290
>gi|222085416|ref|YP_002543946.1| hypothetical protein Arad_1629 [Agrobacterium radiobacter K84]
gi|221722864|gb|ACM26020.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 303
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 97/290 (33%), Positives = 171/290 (58%), Gaps = 2/290 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++ G F AY+ WG+ PLY + L + E+++HR+LWS+P ++ +K
Sbjct: 15 SLRGFGFALTAYLFWGVLPLYMKALAHIPATEIVAHRILWSVPVAGVVLLALGRM-GDIK 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L +P+ V M+ +AT++ ++WG +++A+ + YF+ P+ S+ LG++ LKE+
Sbjct: 74 AALSSPRTVAMVSLTATLVTINWGTYVWAISAGHSLDAALGYFINPLFSIALGALLLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A L +++I+T+ +G P ++L + ++W Y F RKT+PVG+++GFF+E+
Sbjct: 134 LAPLQIAAICLAAAAVVILTIEAGTVPWVALTLTLSWGFYAFFRKTLPVGANQGFFLEVL 193
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L IPA Y+++ G H + I DT L+G GL+ + IF+ G K +LST+GI
Sbjct: 194 LLCIPATLYILYLEARGEGHLYRTGISDTALLLGCGLVTALPLMIFANGAKLLRLSTIGI 253
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
M+Y AP ++ + +VF+ K+P T + I F ++ +V+Y + S
Sbjct: 254 MQYIAPTMIFLIAVFVFKEPFGTTQMIAFSLIWAGLVLYSWSMLRQSRAR 303
>gi|148273751|ref|YP_001223312.1| permease DMT family [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|147831681|emb|CAN02650.1| putative permease, DMT family [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 317
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 69/300 (23%), Positives = 127/300 (42%), Gaps = 4/300 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ T G L AY LWG+ P++ L E++ R+L+SL I
Sbjct: 1 MTRPAPESSTRTGLLAAVGAYGLWGVLPVFFLLLVPAGAFEIVGWRILFSLVVCAVVITA 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ ++ P+ + L + ++ V+W ++Y L+ T+ YF+ P+++V
Sbjct: 61 ARR-WGRVVAIVRRPRILLGLGLAGHLILVNWTVYVYGTLSGHVVETALGYFINPIVTVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP---V 190
LG + L+ERL LQ A L +++ ++ + G K
Sbjct: 120 LGVLLLRERLRPLQWTAVGLSAVAVAVIAVGYGQLPWVSLALAGSFGLYGLVKKRVSGGA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ G +E L A +V G G ++ TL L+ G++ + +F +
Sbjct: 180 DALSGLALETAWLVPAATTMLVITGAGAGLTIGTVSLGHTLLLVSTGVVTAGPLLLFGFA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
R LS +G+ +Y APLL VF++ + + R F IV A+V+ + + S +
Sbjct: 240 AGRLPLSVIGLTQYLAPLLQFAFGVFVMHEAMPPERWAGFAIVWAALVLLTVDMIRASRR 299
>gi|87121436|ref|ZP_01077325.1| putative RarD [Marinomonas sp. MED121]
gi|86163279|gb|EAQ64555.1| putative RarD [Marinomonas sp. MED121]
Length = 298
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 71/287 (24%), Positives = 137/287 (47%), Gaps = 1/287 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + AYILWGITP+Y +++ + L+++++RV+WS + ++ F G +K
Sbjct: 7 KGIVPALSAYILWGITPIYFKWMADENPLDIVANRVIWS-VALLAIVITFMGKWGNVKSA 65
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L + K V L+ + ++ V+W FIYA+ T + S Y++ P+ISV L FL ERLN
Sbjct: 66 LASSKTVKTLLATTFLIGVNWSVFIYAIATDRMIDASLGYYINPLISVILAYFFLSERLN 125
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+Q+IA L ++ + I + G + + S L
Sbjct: 126 RVQLIALGLAVIGVGIQVVALGYLPWISILLALSFGFYGLCHKKTPTDSFTSLFVETSLL 185
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+P F ++ ++ G + + + + G + + +FS K KLST+G M+Y
Sbjct: 186 MPIAFIIMGYLYNAGGNIAERELTTWMLFMLAGPVTTLPLLLFSLASKTVKLSTLGFMQY 245
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P +++ ++F+ + ++ + + F + + +++Y +V K
Sbjct: 246 IGPTMILGLAIFVYGEELEPAKALTFTFIWVGLLLYGFDSVRRDSKR 292
>gi|57651087|ref|YP_187505.1| rarD protein [Staphylococcus aureus subsp. aureus COL]
gi|87162275|ref|YP_495262.1| RarD protein [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88196648|ref|YP_501479.1| hypothetical protein SAOUHSC_03031 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151222805|ref|YP_001333627.1| RarD protein [Staphylococcus aureus subsp. aureus str. Newman]
gi|161510903|ref|YP_001576562.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|258451389|ref|ZP_05699420.1| RarD protein [Staphylococcus aureus A5948]
gi|282920697|ref|ZP_06328416.1| RarD protein [Staphylococcus aureus A9765]
gi|284023016|ref|ZP_06377414.1| RarD protein [Staphylococcus aureus subsp. aureus 132]
gi|294849804|ref|ZP_06790544.1| RarD protein [Staphylococcus aureus A9754]
gi|57285273|gb|AAW37367.1| rarD protein [Staphylococcus aureus subsp. aureus COL]
gi|87128249|gb|ABD22763.1| RarD protein [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87204206|gb|ABD32016.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150375605|dbj|BAF68865.1| RarD protein [Staphylococcus aureus subsp. aureus str. Newman]
gi|160369712|gb|ABX30683.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257860919|gb|EEV83736.1| RarD protein [Staphylococcus aureus A5948]
gi|282594105|gb|EFB99093.1| RarD protein [Staphylococcus aureus A9765]
gi|294823352|gb|EFG39781.1| RarD protein [Staphylococcus aureus A9754]
gi|315197896|gb|EFU28229.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus CGS01]
gi|320141396|gb|EFW33239.1| protein RarD [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144221|gb|EFW35988.1| protein RarD [Staphylococcus aureus subsp. aureus MRSA177]
gi|329731655|gb|EGG68015.1| protein RarD [Staphylococcus aureus subsp. aureus 21189]
Length = 302
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++ + E+++ R+++S + F +
Sbjct: 1 MNSEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSAIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|149917322|ref|ZP_01905821.1| rarD protein [Plesiocystis pacifica SIR-1]
gi|149821929|gb|EDM81323.1| rarD protein [Plesiocystis pacifica SIR-1]
Length = 309
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 4/289 (1%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
AY WG+ L+ + L V E + HRV+W+ VF + + G L+ K +
Sbjct: 19 LALAAYGSWGVLALFWKQLHHVPASEQLVHRVIWAAV-VFVILAAWRGDLNAAKAAFVDR 77
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
L+ S+T+LA++W F+YA+ T + S Y++ P++S+ LG L+ERL LQ
Sbjct: 78 ARRRRLLLSSTLLAINWFVFVYAVATDRVLHASLGYYINPIVSMLLGVFVLRERLRPLQW 137
Query: 149 IAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
A L + +M + +G P + + +A+ + Y RKT V + G IE +LA+P
Sbjct: 138 CAVGAAALGVALMVIGAGELPWIGVTVALAFGFYGLTRKTAEVEALPGNTIETALLALPC 197
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF--CIFSYGIKRAKLSTVGIMEYT 265
L + W G+ ++ L+ + F F+ +R L +G ++Y
Sbjct: 198 LAVLGWIELGSGDGGHFLSVDWKTTLLLLATGPATAFPVLWFTGAARRLPLYVIGFIQYI 257
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P + +V + + + + FG + + +++L V + +
Sbjct: 258 TPTTHFLFAVLLFGETFTSGHAVAFGAIWSGVGLFVLDQVRELRRERRA 306
>gi|284989356|ref|YP_003407910.1| RarD protein, DMT superfamily transporter [Geodermatophilus
obscurus DSM 43160]
gi|284062601|gb|ADB73539.1| RarD protein, DMT superfamily transporter [Geodermatophilus
obscurus DSM 43160]
Length = 305
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/285 (27%), Positives = 145/285 (50%), Gaps = 2/285 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G AY LWG+ PLY LE +E+++HRV+WSL V + +
Sbjct: 3 ERRAGVASGLAAYGLWGLFPLYFPLLEPAGGVEIVAHRVVWSLLFVAVLLTALR-AWPQV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ T+ + +A+ +L +A ++A +W F+Y + + TS YF+ P++SV LG V E
Sbjct: 62 RATVTDGRALLVLAGAAVLIAANWLVFVYGVNSGHVVETSLGYFINPLVSVLLGVVVFAE 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL LQ +A + +++ ++ + G P ++L +A T+ Y +K + V ++ G F+E
Sbjct: 122 RLRRLQWVAVGIAAVAVGVLAVDYGRPPWIALTLAGTFGLYGLMKKLVRVAAAPGLFVET 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +PA+ + G L L+ G+ + +F+ +R LSTVG
Sbjct: 182 ALVVVPAVAVLAVLHAQGEGTAGSAGTGHLLLLLSSGVATAVPLLLFAGATRRIPLSTVG 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++Y PL+ + VF+ +P+ R F IV +A+ V+ + ++
Sbjct: 242 LLQYVTPLMQLAIGVFVYDEPMPPARLAGFVIVWVALAVFTVDSL 286
>gi|32474304|ref|NP_867298.1| RarD protein (chloramphenicol resistance) [Rhodopirellula baltica
SH 1]
gi|32444842|emb|CAD74844.1| RarD protein (chloramphenicol resistance) [Rhodopirellula baltica
SH 1]
Length = 314
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/302 (23%), Positives = 144/302 (47%), Gaps = 6/302 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+K + S +G + A+ +WG+ P+Y + + E++ HR++WS + +
Sbjct: 5 TKHSHSGELKIGLVCALLAHTMWGLFPIYWRQIGNADSTELVCHRIVWSFVTLGLVLPVM 64
Query: 75 -----SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
GG ++ L++ K + +A ++A++W FI+A+ + S Y++ P+
Sbjct: 65 LWRGRWGGFRVVYQQLRSRKVWAVYSIAAVMIAINWLAFIWAVNNNRVLEASLGYYINPL 124
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIM-TLHSGIPLLSLAIAVTWSAYCFARKTI 188
++V LG V L ERL Q +A + + +M + G+P +S+A+A +++ Y +K
Sbjct: 125 LNVVLGVVVLGERLRWPQWMAVGFAAVGVSVMAIGNGGLPWVSMAMATSFAIYGLVKKKA 184
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G +E+ +L +PA Y+ G G + L+G GL+ F+
Sbjct: 185 SLPVLLGLMLEVTLLVVPAAIYLGMRLADGVSTMQTGTTIEFGMLLGAGLITIAPLAFFA 244
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++R LS +GI++Y P L + + + +D R I F V ++++LL +
Sbjct: 245 AAVQRVDLSLMGILQYIGPTLQFLVGYVLFGETLDLPRKIGFVFVWTGLLIFLLASQFKR 304
Query: 309 GK 310
+
Sbjct: 305 RR 306
>gi|77465343|ref|YP_354846.1| RarD family protein [Rhodobacter sphaeroides 2.4.1]
gi|77389761|gb|ABA80945.1| possible transporter, RarD, DMT superfamily [Rhodobacter
sphaeroides 2.4.1]
Length = 299
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 91/289 (31%), Positives = 178/289 (61%), Gaps = 2/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY++WG P+Y + L + EV++HRV+WS+P +V L+
Sbjct: 12 SPRGMAFALSAYLIWGFLPVYMKALSHIPAYEVVAHRVIWSVPVALAVLVALGRT-QDLR 70
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A +++V+WG +++A+ T+ Y++ P+ SVFLG+V L ER
Sbjct: 71 AALRSPRMLLMAAATAALISVNWGIYVWAIGAGHALDTALGYYINPLFSVFLGAVLLGER 130
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LN LQ++A +L + +++++T+ +G P++++++ +TW Y + +K++P+G ++GF +E+
Sbjct: 131 LNRLQLVAIVLAVAAVVVLTVEAGRLPIVAISLMLTWGCYAYLKKSLPIGPNQGFLLEVL 190
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L PAL ++W SG HF G++PD L+G G++ + +++ G K KLST+G
Sbjct: 191 LLLPPALGVLIWVEGSGQGHFLHGSLPDQALLLGTGVVTAVPLMLYANGAKLLKLSTIGF 250
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++Y AP L+ +++VF+ +P I F ++ +A+V++ + V + +
Sbjct: 251 LQYVAPTLIFLTAVFVFGEPFGRAEAIAFPMIWVALVIFTVALVRATRR 299
>gi|307946686|ref|ZP_07662021.1| protein RarD [Roseibium sp. TrichSKD4]
gi|307770350|gb|EFO29576.1| protein RarD [Roseibium sp. TrichSKD4]
Length = 315
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 82/305 (26%), Positives = 148/305 (48%), Gaps = 2/305 (0%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
G S A G L AY +WG P Y + VS V++HR++WS+ V ++
Sbjct: 8 GKSPPAAQDEMQRGILLALAAYGMWGFFPAYYKLTASVSADIVVAHRIVWSVFFVGLYLL 67
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + + + +A + V+W F++A+ + S YF+ P++S+
Sbjct: 68 LRNRGAEIWEALTAPAIVFRLCASAAL-IGVNWLVFVWAIGQSKVLDVSLGYFINPLVSI 126
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIM-TLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+G + L+ERL LQ+IA L +++ + G+P +SL +A +++ Y + RK PV
Sbjct: 127 LIGLIVLRERLYPLQMIAVGLASVAVFLQALWTGGLPWVSLVLAFSFAGYAYVRKVTPVR 186
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G E +L A Y++ G + L N+P L G G++ + FS
Sbjct: 187 PTPGLLAESTLLVPLAAGYLMLTASWGMDSLSLNNLPVLAALAGTGIITALPLIAFSGAA 246
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+R + +GIM+Y AP L V +VFI +P+++ R + F I+ A+ ++ + +
Sbjct: 247 RRLPMVIIGIMQYIAPSLHFVMAVFIWNEPLESSRLVTFLIIWTALAIFTFDSYRRYQAS 306
Query: 312 KTKKS 316
+ K +
Sbjct: 307 RRKAA 311
>gi|25028586|ref|NP_738640.1| putative integral membrane protein [Corynebacterium efficiens
YS-314]
gi|259507642|ref|ZP_05750542.1| RarD family permease [Corynebacterium efficiens YS-314]
gi|23493871|dbj|BAC18840.1| putative integral membrane protein [Corynebacterium efficiens
YS-314]
gi|259164821|gb|EEW49375.1| RarD family permease [Corynebacterium efficiens YS-314]
Length = 293
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 138/289 (47%), Gaps = 4/289 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ F AY+LWG+ P + L LE+++HR++W+ + + G
Sbjct: 1 MIYGFLAYLLWGLFPAFFPLLLPAGPLEILAHRIIWTAVIMIIVVSVRRGWREFRGV--- 57
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +V +A +A++W ++ + + + YF+ P++SV G + +E+L L
Sbjct: 58 DRVTWARVVAAALFIALNWLLYVITVNSGHVTEAALGYFINPLVSVVFGIILFREQLRRL 117
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q++A + + ++L + +G P A+A ++ Y +K + + + E VL
Sbjct: 118 QVLAVCIAVAAVLFLAFLAGQPPYLALALAFSFGIYGAIKKKVNLSAITSLTAETLVLLP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL Y++W +G F LI GL+ + +F Y K LSTVG+++Y
Sbjct: 178 VALGYILWLEMTGVGTFTDNGAGHAALLISSGLVTALPLLLFGYAAKAIPLSTVGMLQYV 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P + ++ +V ++ + ++ R I F I+ +A+ +YL +I + K
Sbjct: 238 TPTMQMLWAVVVVNEDMEPERWIGFIIIWVAVSLYLSDILIQRRSARGK 286
>gi|297159531|gb|ADI09243.1| putative integral membrane protein [Streptomyces bingchenggensis
BCW-1]
Length = 326
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/289 (26%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
K + G + F AY +WG+ PL+ LE +E+++HR++WSL V ++
Sbjct: 2 KPESQSQQRSGLAYGFAAYGMWGLVPLFWPLLEPAGAVEILAHRMVWSLVAVVLVLLALR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S ++ L+ P +GM+ +A +++V+WG +I+ + + TS YF+ P++S+ G
Sbjct: 62 R-WSWIRPLLRQPARLGMIAIAAAVISVNWGLYIWGVNSGHVVETSLGYFINPLVSIGFG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L ERL +Q +A + + ++ ++++ G P ++L +A +++ Y A+K I +G E
Sbjct: 121 VLLLHERLRPVQWVAVGVGVAAVAVLSVGYGSLPWIALTLAFSFATYGLAKKRIGLGGLE 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
E V +PAL +V++ G F G + L+ GL+ + F R
Sbjct: 181 SLAAETAVQFLPALGFVIFLTAHGDSTFGSGGAGHSALLVSSGLITALPLICFGTAAVRL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
LST+G+++Y AP+ V + + + R F +V +A+ +
Sbjct: 241 PLSTIGMLQYIAPIFQFALGVAVFHESMPPERWAGFSLVWLALALLTWD 289
>gi|325271484|ref|ZP_08138002.1| RarD protein, DMT superfamily transporter [Pseudomonas sp. TJI-51]
gi|324103374|gb|EGC00703.1| RarD protein, DMT superfamily transporter [Pseudomonas sp. TJI-51]
Length = 295
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 142/294 (48%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ P+Y + ++ V +E+I HRVLWS ++ +
Sbjct: 2 HAANPRRGYILGLSAYIIWGLFPIYFKAIQSVPAVEIIVHRVLWSALFGSLLLLLWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ +G+L S ++A +W +++++ + S Y++ P+I+V LG +
Sbjct: 61 GWWRELRDNPRRLGVLALSGALIAFNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A + + + +P +SLA+A+++ Y RK PV + G
Sbjct: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLALALSFGFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL +++ + + + L+L+ G + F+ + +
Sbjct: 181 VETWMLVPLALGWLLLHPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + + F + + +Y + ++ K
Sbjct: 241 TLGFLQYLAPTLVLLQAVLLFDEHLSSSTLVAFMFIWAGLAIYSVDAWLSLRKR 294
>gi|54303176|ref|YP_133169.1| hypothetical protein PBPRB1503 [Photobacterium profundum SS9]
gi|46916604|emb|CAG23369.1| hypothetical membrane protein [Photobacterium profundum SS9]
Length = 300
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 142/295 (48%), Gaps = 1/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +++LWGI PLY FL Q + E+++ R+++S+P + I+ L
Sbjct: 2 QSHRAGNALAAFSFVLWGILPLYYHFLPQANTNELLASRIIFSVPVMLLIIMILRQPLPS 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + +++ V ++ I+ + W F +AL Q S +F+ P+ ++ G FLK
Sbjct: 62 YRAIINDKRSLIFTVIASLIMCISWYAFTWALTHGQVLAASLGFFINPLFAIAFGVFFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL++ QI A +L I + + G P ++L + ++ Y +K I + IE
Sbjct: 122 ERLSNAQIAAVVLGIAGISYQVWNYGELPWIALIMGSFFALYGLCKKFIKYNALTSVTIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VLA A+ +++W G +I L +G + F+ I R L+ V
Sbjct: 182 SVVLAPFAIAFMLWQYLQGSSVALSSDIQTLLLYMGSAPVTLAPLIFFALAINRTSLTMV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+M+Y P L + +VF+ + D V+ + FG + + +++ L +I KNK +
Sbjct: 242 GLMQYIEPSLQFLLAVFLFGEIFDEVKLVSFGFIWLGLLLCTLEALIRGFKNKHR 296
>gi|294341599|emb|CAZ90016.1| putative Permease of the drug/metabolite transporter (DMT)
superfamily; RarD domain [Thiomonas sp. 3As]
Length = 307
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 83/285 (29%), Positives = 153/285 (53%), Gaps = 2/285 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++ AY++WG+ PLY + LEQV L++++HR+ WSL V + S ++
Sbjct: 4 GVVYALAAYVIWGLFPLYFKALEQVPSLQILAHRMAWSLLFVALLLAVLKR-WSWMRLLR 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P + SA +L+ +WG +I+A+ + S Y++ P+++V LGSV L ERL
Sbjct: 63 EQPALLARFALSAVLLSSNWGIYIWAVNSNHVVDASLGYYINPLVNVALGSVLLHERLRG 122
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ +A + + +M + G P +SL++A+T+ +Y RKT P+G+ EG +E VL
Sbjct: 123 LQWVALAIAAAGVTVMAIEVGHVPWISLSLALTFGSYALLRKTAPLGALEGLAVETAVLF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y+ W G F ++ L+ G + + +F+ G +R ++ +G+++Y
Sbjct: 183 PLAVAYLFWLSTQGMNAFASADLSTRWLLVAAGPITTIPLLLFAAGARRMSMTLLGVLQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P L + V++ +P + + FG+V + + V+LL + +
Sbjct: 243 ITPTLQLALGVWLYHEPFAAAKMVGFGLVWVGLAVFLLDGLRAAW 287
>gi|300917874|ref|ZP_07134508.1| protein RarD [Escherichia coli MS 115-1]
gi|300414919|gb|EFJ98229.1| protein RarD [Escherichia coli MS 115-1]
Length = 296
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H I L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPISLNLLLITAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK 296
>gi|184200193|ref|YP_001854400.1| hypothetical protein KRH_05470 [Kocuria rhizophila DC2201]
gi|183580423|dbj|BAG28894.1| hypothetical membrane protein [Kocuria rhizophila DC2201]
Length = 312
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/295 (22%), Positives = 126/295 (42%), Gaps = 4/295 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + F AY +WG+ PLY L + E+++ RV++SL + G L
Sbjct: 18 RAGVGYGFGAYAIWGLLPLYFVLLAPATPYEIVAMRVVFSLLFCLLLLAATRG-LRQYGR 76
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ +AV L + ++A +W + A T S YF+ P++++ LG + L E L
Sbjct: 77 LFRDRQAVLALTVAGVLIAGNWLLYTVAATTGHTLEASLGYFINPIVAILLGVLVLHETL 136
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSEGFFIEM 200
LQ A + ++++L+M + G A + +R + E
Sbjct: 137 RPLQWAAIGVGVVAVLVMAVFYGAIPWLSLGLAFTFGFYGLVKSRLGARYPALVTLAAET 196
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ AL V G +G L L+ G++ + +F R LST+G
Sbjct: 197 TMITPLALVAVGVLGAAGQITLVSEGPGHFLLLLAAGVITAVPLLLFGAAASRLPLSTLG 256
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+++Y AP+ + ++ + + + R F +V IA+V+ +L V + +
Sbjct: 257 MIQYVAPIGQFILAIALFHEEMPPQRWAGFVLVWIAVVLLVLDAVRAPRAPRLPR 311
>gi|253730382|ref|ZP_04864547.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253725862|gb|EES94591.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 302
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++ + E+++ R+++S + F +
Sbjct: 1 MNTEYKKGVFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSAIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|224499662|ref|ZP_03668011.1| RarD protein [Listeria monocytogenes Finland 1988]
Length = 326
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|323439718|gb|EGA97436.1| RarD protein [Staphylococcus aureus O11]
gi|323443291|gb|EGB00908.1| RarD protein [Staphylococcus aureus O46]
Length = 304
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 7/302 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G AYILWGI P+Y QF++ + E+++ R+++S + F +V +
Sbjct: 4 NTEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSAIFMIFILVVGQKQRN 63
Query: 80 LLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 64 AFQRDMNQLLAKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILLA 123
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 124 LIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAIS 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
IE V A L YV++ F L L G + +FS G KR
Sbjct: 184 SITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKRI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 242 PLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPVA 301
Query: 315 KS 316
K+
Sbjct: 302 KT 303
>gi|307545294|ref|YP_003897773.1| chloramphenicol-sensitive protein RarD [Halomonas elongata DSM
2581]
gi|307217318|emb|CBV42588.1| K05786 chloramphenicol-sensitive protein RarD [Halomonas elongata
DSM 2581]
Length = 302
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 1/296 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ S G F AY++WG PL+ E + EV+ HRVLWS + +
Sbjct: 4 TQTVSPDVTKGVGFGLAAYLMWGCFPLFFALFEGIPAYEVLIHRVLWSCVFLVGLVTLLR 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S + + L++P+ +G ++ A ++ ++WG +IYA+ +RQ S YF+TP+++V LG
Sbjct: 64 R-WSPVTEALRHPRRLGRVLACAVLIGLNWGLYIYAVESRQVLQASLGYFLTPLVNVTLG 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ L+ER+ LQ +A L +++ I + G +
Sbjct: 123 LLVLRERMLRLQGVAVALAGIAITIQLVMLGEVPWISLALALTFGTYGLLRKQVPLDGLS 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L +P + G FL + TL LI G++ + F+ +R +
Sbjct: 183 GLFVETLLLMPLGLLALAWLSEAGLSHFLADHRSTLLLIASGVITALPLLAFAGAARRLR 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
L+T+G + Y P + + ++ + +P+ + F ++ + +Y +
Sbjct: 243 LATLGFLMYLNPTIQFLIALLVFNEPLTPAQLATFILIWCGLALYSWTAWQGRPRE 298
>gi|213965305|ref|ZP_03393502.1| RarD protein [Corynebacterium amycolatum SK46]
gi|213952157|gb|EEB63542.1| RarD protein [Corynebacterium amycolatum SK46]
Length = 322
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 75/283 (26%), Positives = 151/283 (53%), Gaps = 4/283 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ F AY+LW + PLY LE +E+++HR +W+L + A+ + L + K
Sbjct: 1 MIQAFGAYLLWALFPLYFPLLEPAGAVEILAHRFVWTLVFMVIALSFMRAWPELKAASAK 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +A +++V+WG ++Y + Q + YF+ P++SV L +F +E ++ L
Sbjct: 61 TWGTIFI---AALLISVNWGVYVYLVNNGQVAEAALGYFINPLVSVLLAMIFFRESISWL 117
Query: 147 QIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q+ + +L ++++++T+ G P L +LA+A ++ Y +K + + S+ E V+
Sbjct: 118 QLGSVILATIAVIVLTIGVGHPPLGALALAFSFGFYGLMKKRVSLSSAASLTAESAVITP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL Y++W ++G F TL ++ G+ + +F G KR L+T+G+M+Y
Sbjct: 178 IALAYILWLTYNGQSTFTSEGTGHTLLMMSAGVATAIPLLLFGEGAKRLPLATLGLMQYL 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+L I +V +L + ++ R I F I+ A+ +++ ++
Sbjct: 238 TPVLQITLAVTVLGEELEPERWIGFFIIWGAVALFICDLILKM 280
>gi|113869623|ref|YP_728112.1| putative chloramphenicol sensitive permease [Ralstonia eutropha
H16]
gi|113528399|emb|CAJ94744.1| putative chloramphenicol sensitive permease [Ralstonia eutropha
H16]
Length = 301
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 148/291 (50%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L+ AYI+WG+ PLY + L ++ LE++ HR++WSL + + + + L
Sbjct: 3 LGILYALLAYIIWGLLPLYIKSLPGIAPLEILLHRMVWSLVFLGLILTW-RHQWAWLGRV 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L++ + + SA +L +W +I+A+ + S YF+ P+ SV LG VFL ERL
Sbjct: 62 LRDRRLLLSFGASAALLCANWFLYIWAVSANRVVDASLGYFINPLFSVLLGVVFLHERLR 121
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q ++ + + +T+ +G P ++L +A ++ Y RKT +G+ EG +E ++
Sbjct: 122 LVQWLSIAVAAAGVAWLTVAAGQLPWIALGLAASFGGYGLLRKTGALGALEGLSLETLLV 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + W +G + F L+ G + + F+ G +R LS +G+++
Sbjct: 182 FPMAAAALAWLFATGQDSFTHAAPGTQWLLLLAGPVTAVPLLFFAAGARRIPLSLLGLLQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
YT P L ++ V++ +P + + + ++ +++ +Y + + + K
Sbjct: 242 YTGPTLQLLLGVWLWNEPFPAQKQVGYALIWLSLALYAAEGLWMNTRQKPA 292
>gi|103486914|ref|YP_616475.1| rarD protein [Sphingopyxis alaskensis RB2256]
gi|98976991|gb|ABF53142.1| rarD protein [Sphingopyxis alaskensis RB2256]
Length = 304
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 78/288 (27%), Positives = 152/288 (52%), Gaps = 2/288 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G F AY +WG PL+ + ++ V +EV++ R++WSLP F ++ F + L
Sbjct: 14 GLPFAIAAYGIWGFVPLFFKLVDSVPPVEVLTQRIIWSLPLCFLIML-FRRQIGEYLAAL 72
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + +L+ SA ++AV+W +IYA+ T S Y++ P+++V LG +FL ERL+
Sbjct: 73 RDWRTLRLLLASALLIAVNWLVYIYAIFTDHVLAASLGYYLNPLVNVMLGMLFLGERLSR 132
Query: 146 LQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+Q++A ++ + + I+ +SL +A ++ Y RK +PVGS G +E VL
Sbjct: 133 MQLLAVVIAGVGVAILLAGALDTLWISLTLAFSFGVYGLLRKVVPVGSLPGLSVETTVLL 192
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+P+L W G F + +L L+ G++ + +F+ +R + +G ++Y
Sbjct: 193 LPSLALSAWYIGVGDGRGFASDTSISLLLMAGGVVTAVPLLLFATAARRMSYAALGFVQY 252
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
AP + + S+F+ +P+ V+ F ++ I++ V+ + +
Sbjct: 253 LAPTIQFLLSLFVFGEPLKPVQLACFVLIWISIAVFSFDMWRKTRAER 300
Score = 39.5 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 47/142 (33%)
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF 223
G+P A + F + V E + +++ G
Sbjct: 12 QGGLPFAIAAYGIWGFVPLFFKLVDSVPPVEVLTQRIIWSLPLCFLIMLFRRQIGEYLAA 71
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
L + L+ LL + + ++ Y I + + Y PL+ ++ + L + +
Sbjct: 72 LRDWRTLRLLLASALLIAVNWLVYIYAIFTDHVLAASLGYYLNPLVNVMLGMLFLGERLS 131
Query: 284 TVRTIVFGIVVIAMVVYLLPTV 305
++ + I + + + L +
Sbjct: 132 RMQLLAVVIAGVGVAILLAGAL 153
>gi|320197627|gb|EFW72239.1| Protein rarD [Escherichia coli WV_060327]
Length = 295
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +++ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVMVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|330448565|ref|ZP_08312213.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492756|dbj|GAA06710.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 301
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 1/297 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + +++LWGI PLY QFL Q + E+++ R+++S+P + ++ L
Sbjct: 2 QSRRAGNMLAAFSFVLWGILPLYYQFLPQANTNELLALRIIFSVPVMLLVMLLLKRPLPR 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L + K++ M + I++V W F +A+ + S YF+ P+ ++ LG FL
Sbjct: 62 ISTLLADKKSLFMCFIAGCIMSVSWYAFTWAITHGEVLAASLGYFINPLFAIALGLFFLS 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL+ Q+ A L I+ + G P LSL + ++ Y +K I + IE
Sbjct: 122 ERLSKAQVAAVALAIIGIGYQVWQYGELPWLSLIMGSFFAIYGLTKKYIKYDALTSVTIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL A+ Y++W SG L +G + F+ + R L+ V
Sbjct: 182 AAVLTPFAVIYMIWLYLSGDSVSLTSGATTFLLYVGSAPVTVAPLIFFALALNRTSLTMV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
G+M+Y P L + +VF+ + D + + FG++ +++ L + + K K +
Sbjct: 242 GLMQYIEPSLQFLLAVFLFGEVFDQTKAVSFGLIWFGLILCTLEALPSLFHRKKKIA 298
>gi|258646154|ref|ZP_05733623.1| protein RarD [Dialister invisus DSM 15470]
gi|260403537|gb|EEW97084.1| protein RarD [Dialister invisus DSM 15470]
Length = 304
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 70/293 (23%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG--- 77
+G +Y+LWG+ P+Y + L VS E++SHR++WS + + +
Sbjct: 2 KKRNLGLTAAVGSYLLWGLLPVYWKQLSAVSAYEILSHRIIWSFFFMLMILSFMGRMVSF 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + +L ++ ++ +W FI+A+ R TS Y++ P++SV LG V
Sbjct: 62 WEECKHLWADKSRGALLALASFLITANWCIFIWAVTNRHVVDTSVGYYMNPLVSVLLGVV 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
ERL+ ++ + + + +MT G PL+++ +A T++ Y +K + + +
Sbjct: 122 CFHERLSKMKWFSIAVAAAGIGVMTWELGRFPLIAVGLASTFALYGAVKKKLNLDAFYSI 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E + AL YV+ G G HF + ++ +FLIG G + + +FS G L
Sbjct: 182 TLETFFVLPFALAYVLSLGNDGMGHFTVDDLRTAVFLIGAGAVTATPLVLFSIGANDLPL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +G +Y +P + ++ +F+ +P + F + A+ V+ +
Sbjct: 242 NVLGFCQYISPSITLLLGIFLFGEPFTRAQVSAFSFIWSALAVFTIADWRERK 294
>gi|74314331|ref|YP_312750.1| hypothetical protein SSON_3993 [Shigella sonnei Ss046]
gi|157158296|ref|YP_001465305.1| RarD protein [Escherichia coli E24377A]
gi|191166079|ref|ZP_03027914.1| RarD protein [Escherichia coli B7A]
gi|193065718|ref|ZP_03046783.1| RarD protein [Escherichia coli E22]
gi|193067970|ref|ZP_03048935.1| RarD protein [Escherichia coli E110019]
gi|194429205|ref|ZP_03061733.1| RarD protein [Escherichia coli B171]
gi|209921298|ref|YP_002295382.1| hypothetical protein ECSE_4107 [Escherichia coli SE11]
gi|218556384|ref|YP_002389298.1| putative chloramphenicol resistance permease [Escherichia coli
IAI1]
gi|218697540|ref|YP_002405207.1| putative chloramphenicol resistance permease [Escherichia coli
55989]
gi|256021435|ref|ZP_05435300.1| putative chloramphenicol resistance permease [Shigella sp. D9]
gi|260857775|ref|YP_003231666.1| putative chloramphenical resistance permease RadD [Escherichia coli
O26:H11 str. 11368]
gi|293468137|ref|ZP_06664549.1| RarD protein [Escherichia coli B088]
gi|300818707|ref|ZP_07098914.1| protein RarD [Escherichia coli MS 107-1]
gi|300823359|ref|ZP_07103490.1| protein RarD [Escherichia coli MS 119-7]
gi|300923323|ref|ZP_07139371.1| protein RarD [Escherichia coli MS 182-1]
gi|300939959|ref|ZP_07154588.1| protein RarD [Escherichia coli MS 21-1]
gi|301328414|ref|ZP_07221500.1| protein RarD [Escherichia coli MS 78-1]
gi|307313607|ref|ZP_07593227.1| RarD protein, DMT superfamily transporter [Escherichia coli W]
gi|309796233|ref|ZP_07690643.1| protein RarD [Escherichia coli MS 145-7]
gi|331670666|ref|ZP_08371503.1| protein RarD [Escherichia coli TA271]
gi|331679931|ref|ZP_08380594.1| protein RarD [Escherichia coli H591]
gi|332282671|ref|ZP_08395084.1| RarD protein [Shigella sp. D9]
gi|73857808|gb|AAZ90515.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|157080326|gb|ABV20034.1| RarD protein [Escherichia coli E24377A]
gi|190903855|gb|EDV63569.1| RarD protein [Escherichia coli B7A]
gi|192926685|gb|EDV81314.1| RarD protein [Escherichia coli E22]
gi|192958590|gb|EDV89028.1| RarD protein [Escherichia coli E110019]
gi|194412717|gb|EDX29011.1| RarD protein [Escherichia coli B171]
gi|209914557|dbj|BAG79631.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218354272|emb|CAV00957.1| putative chloramphenicol resistance permease [Escherichia coli
55989]
gi|218363153|emb|CAR00794.1| putative chloramphenicol resistance permease [Escherichia coli
IAI1]
gi|257756424|dbj|BAI27926.1| predicted chloramphenical resistance permease RadD [Escherichia
coli O26:H11 str. 11368]
gi|291321515|gb|EFE60953.1| RarD protein [Escherichia coli B088]
gi|300420409|gb|EFK03720.1| protein RarD [Escherichia coli MS 182-1]
gi|300455221|gb|EFK18714.1| protein RarD [Escherichia coli MS 21-1]
gi|300524145|gb|EFK45214.1| protein RarD [Escherichia coli MS 119-7]
gi|300528673|gb|EFK49735.1| protein RarD [Escherichia coli MS 107-1]
gi|300845164|gb|EFK72924.1| protein RarD [Escherichia coli MS 78-1]
gi|306906588|gb|EFN37100.1| RarD protein, DMT superfamily transporter [Escherichia coli W]
gi|308120115|gb|EFO57377.1| protein RarD [Escherichia coli MS 145-7]
gi|315063112|gb|ADT77439.1| predicted chloramphenical resistance permease [Escherichia coli W]
gi|320198473|gb|EFW73074.1| Protein rarD [Escherichia coli EC4100B]
gi|323155228|gb|EFZ41412.1| hypothetical protein ECEPECA14_2925 [Escherichia coli EPECa14]
gi|323161116|gb|EFZ47034.1| hypothetical protein ECE128010_2667 [Escherichia coli E128010]
gi|323167574|gb|EFZ53280.1| hypothetical protein SS53G_2158 [Shigella sonnei 53G]
gi|323173436|gb|EFZ59065.1| hypothetical protein ECLT68_1741 [Escherichia coli LT-68]
gi|323182592|gb|EFZ67996.1| hypothetical protein ECOK1357_4186 [Escherichia coli 1357]
gi|323189757|gb|EFZ75036.1| hypothetical protein ECRN5871_2132 [Escherichia coli RN587/1]
gi|323380824|gb|ADX53092.1| RarD protein, DMT superfamily transporter [Escherichia coli KO11]
gi|323943864|gb|EGB39958.1| RarD protein [Escherichia coli H120]
gi|324016201|gb|EGB85420.1| protein RarD [Escherichia coli MS 117-3]
gi|331062139|gb|EGI34061.1| protein RarD [Escherichia coli TA271]
gi|331072478|gb|EGI43810.1| protein RarD [Escherichia coli H591]
gi|332105023|gb|EGJ08369.1| RarD protein [Shigella sp. D9]
Length = 295
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|258423256|ref|ZP_05686148.1| RarD protein [Staphylococcus aureus A9635]
gi|257846585|gb|EEV70607.1| RarD protein [Staphylococcus aureus A9635]
Length = 302
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 145/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++ + E+++ R+++S+ + F +
Sbjct: 1 MNSEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSVIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLAKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|126464804|ref|YP_001045917.1| transporter DMT superfamily protein [Rhodobacter sphaeroides ATCC
17029]
gi|332560947|ref|ZP_08415265.1| RarD protein, DMT superfamily transporter [Rhodobacter sphaeroides
WS8N]
gi|126106615|gb|ABN79145.1| RarD protein, DMT superfamily transporter [Rhodobacter sphaeroides
ATCC 17029]
gi|332274745|gb|EGJ20061.1| RarD protein, DMT superfamily transporter [Rhodobacter sphaeroides
WS8N]
Length = 299
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 177/289 (61%), Gaps = 2/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY++WG P+Y + L + EV++HRV+WS+P +V L+
Sbjct: 12 SPRGMAFALSAYLIWGFLPVYMKALSHIPAYEVVAHRVIWSVPVALAVLVALGRT-QDLR 70
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A +++V+WG +++A+ T+ Y++ P+ SVFLG+V L ER
Sbjct: 71 AALRSPRMLLMAAATAALISVNWGIYVWAIGAGHALDTALGYYINPLFSVFLGAVLLGER 130
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LN LQ++A +L + +++++T+ +G P++++++ +TW Y + +K++P+G ++GF +E+
Sbjct: 131 LNRLQLVAIVLAVAAVVVLTVEAGRLPIVAISLMLTWGCYAYLKKSLPIGPNQGFLLEVL 190
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L PAL ++W SG HF G++ D L+G G++ + +++ G K KLST+G
Sbjct: 191 LLLPPALGVLIWVEGSGQGHFLHGSLADQALLLGTGVVTAVPLMLYANGAKLLKLSTIGF 250
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++Y AP L+ +++VF+ +P I F ++ +A+V++ + V + +
Sbjct: 251 LQYVAPTLIFLTAVFVFGEPFGRAEAIAFPMIWVALVIFTVALVRATRR 299
>gi|49176418|ref|YP_026262.1| predicted chloramphenical resistance permease [Escherichia coli
str. K-12 substr. MG1655]
gi|89110201|ref|AP_003981.1| predicted chloramphenical resistance permease [Escherichia coli
str. K-12 substr. W3110]
gi|157163295|ref|YP_001460613.1| RarD protein [Escherichia coli HS]
gi|170022159|ref|YP_001727113.1| transporter DMT superfamily protein [Escherichia coli ATCC 8739]
gi|170083300|ref|YP_001732620.1| chloramphenical resistance permease [Escherichia coli str. K-12
substr. DH10B]
gi|170683494|ref|YP_001746137.1| RarD protein [Escherichia coli SMS-3-5]
gi|188492787|ref|ZP_03000057.1| RarD protein [Escherichia coli 53638]
gi|194438618|ref|ZP_03070706.1| RarD protein [Escherichia coli 101-1]
gi|215489147|ref|YP_002331578.1| predicted chloramphenical resistance permease [Escherichia coli
O127:H6 str. E2348/69]
gi|218692095|ref|YP_002400307.1| putative chloramphenicol resistance permease [Escherichia coli
ED1a]
gi|218701488|ref|YP_002409117.1| putative chloramphenicol resistance permease [Escherichia coli
IAI39]
gi|238902894|ref|YP_002928690.1| putative chloramphenical resistance permease [Escherichia coli
BW2952]
gi|253775555|ref|YP_003038386.1| RarD protein, DMT superfamily transporter [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254039031|ref|ZP_04873082.1| RarD protein [Escherichia sp. 1_1_43]
gi|254163764|ref|YP_003046872.1| putative chloramphenical resistance permease [Escherichia coli B
str. REL606]
gi|256026166|ref|ZP_05440031.1| predicted chloramphenical resistance permease [Escherichia sp.
4_1_40B]
gi|293417286|ref|ZP_06659911.1| RarD protein [Escherichia coli B185]
gi|300904074|ref|ZP_07121954.1| protein RarD [Escherichia coli MS 84-1]
gi|300930012|ref|ZP_07145445.1| protein RarD [Escherichia coli MS 187-1]
gi|300950416|ref|ZP_07164339.1| protein RarD [Escherichia coli MS 116-1]
gi|301029036|ref|ZP_07192189.1| protein RarD [Escherichia coli MS 196-1]
gi|301303715|ref|ZP_07209836.1| protein RarD [Escherichia coli MS 124-1]
gi|301646114|ref|ZP_07246014.1| protein RarD [Escherichia coli MS 146-1]
gi|307140518|ref|ZP_07499874.1| predicted chloramphenical resistance permease [Escherichia coli
H736]
gi|312971890|ref|ZP_07786064.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331644552|ref|ZP_08345672.1| protein RarD [Escherichia coli H736]
gi|331660165|ref|ZP_08361101.1| protein RarD [Escherichia coli TA206]
gi|266881|sp|P27844|RARD_ECOLI RecName: Full=Protein rarD
gi|145580|gb|AAD15041.1| rarD [Escherichia coli]
gi|48994976|gb|AAT48220.1| predicted chloramphenical resistance permease [Escherichia coli
str. K-12 substr. MG1655]
gi|85676232|dbj|BAE77482.1| predicted chloramphenical resistance permease [Escherichia coli
str. K12 substr. W3110]
gi|157068975|gb|ABV08230.1| RarD protein [Escherichia coli HS]
gi|169757087|gb|ACA79786.1| RarD protein, DMT superfamily transporter [Escherichia coli ATCC
8739]
gi|169891135|gb|ACB04842.1| predicted chloramphenical resistance permease [Escherichia coli
str. K-12 substr. DH10B]
gi|170521212|gb|ACB19390.1| RarD protein [Escherichia coli SMS-3-5]
gi|188487986|gb|EDU63089.1| RarD protein [Escherichia coli 53638]
gi|194422422|gb|EDX38421.1| RarD protein [Escherichia coli 101-1]
gi|215267219|emb|CAS11667.1| predicted chloramphenical resistance permease [Escherichia coli
O127:H6 str. E2348/69]
gi|218371474|emb|CAR19309.1| putative chloramphenicol resistance permease [Escherichia coli
IAI39]
gi|218429659|emb|CAR10480.1| putative chloramphenicol resistance permease [Escherichia coli
ED1a]
gi|226838722|gb|EEH70750.1| RarD protein [Escherichia sp. 1_1_43]
gi|238862202|gb|ACR64200.1| predicted chloramphenical resistance permease [Escherichia coli
BW2952]
gi|242379351|emb|CAQ34164.1| predicted chloramphenicol resistance permease [Escherichia coli
BL21(DE3)]
gi|253326599|gb|ACT31201.1| RarD protein, DMT superfamily transporter [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975665|gb|ACT41336.1| predicted chloramphenical resistance permease [Escherichia coli B
str. REL606]
gi|253979821|gb|ACT45491.1| predicted chloramphenical resistance permease [Escherichia coli
BL21(DE3)]
gi|260451338|gb|ACX41760.1| RarD protein, DMT superfamily transporter [Escherichia coli DH1]
gi|291431054|gb|EFF04049.1| RarD protein [Escherichia coli B185]
gi|299877999|gb|EFI86210.1| protein RarD [Escherichia coli MS 196-1]
gi|300403954|gb|EFJ87492.1| protein RarD [Escherichia coli MS 84-1]
gi|300450262|gb|EFK13882.1| protein RarD [Escherichia coli MS 116-1]
gi|300462102|gb|EFK25595.1| protein RarD [Escherichia coli MS 187-1]
gi|300841015|gb|EFK68775.1| protein RarD [Escherichia coli MS 124-1]
gi|301075640|gb|EFK90446.1| protein RarD [Escherichia coli MS 146-1]
gi|309704253|emb|CBJ03601.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310334267|gb|EFQ00472.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|315138395|dbj|BAJ45554.1| putative chloramphenicol resistance permease [Escherichia coli DH1]
gi|315254184|gb|EFU34152.1| protein RarD [Escherichia coli MS 85-1]
gi|315296801|gb|EFU56093.1| protein RarD [Escherichia coli MS 16-3]
gi|315618734|gb|EFU99319.1| conserved hypothetical protein [Escherichia coli 3431]
gi|323934122|gb|EGB30557.1| RarD protein [Escherichia coli E1520]
gi|323938954|gb|EGB35173.1| RarD protein [Escherichia coli E482]
gi|323959076|gb|EGB54745.1| RarD protein [Escherichia coli H489]
gi|323964063|gb|EGB59553.1| RarD protein [Escherichia coli M863]
gi|323969338|gb|EGB64637.1| RarD protein [Escherichia coli TA007]
gi|324007522|gb|EGB76741.1| protein RarD [Escherichia coli MS 57-2]
gi|327250669|gb|EGE62375.1| hypothetical protein ECSTEC7V_4515 [Escherichia coli STEC_7v]
gi|331036224|gb|EGI08459.1| protein RarD [Escherichia coli H736]
gi|331052733|gb|EGI24768.1| protein RarD [Escherichia coli TA206]
gi|332345798|gb|AEE59132.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 296
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK 296
>gi|327539581|gb|EGF26190.1| RarD protein [Rhodopirellula baltica WH47]
Length = 314
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 72/302 (23%), Positives = 144/302 (47%), Gaps = 6/302 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+K + S +G + A+ +WG+ P+Y + + E++ HR++WS + +
Sbjct: 5 TKHSHSGELKIGLVCALLAHTMWGLFPIYWRQIGNADSTELVCHRIVWSFVTLGVVLPVM 64
Query: 75 -----SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
GG ++ L++ K + +A ++A++W FI+A+ + S Y++ P+
Sbjct: 65 LWRGRWGGFRVVYQQLRSRKVWAVYSIAAVMIAINWLAFIWAVNNNRVLEASLGYYINPL 124
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIM-TLHSGIPLLSLAIAVTWSAYCFARKTI 188
++V LG V L ERL Q +A + + +M + G+P +S+A+A +++ Y +K
Sbjct: 125 LNVVLGVVVLGERLRWPQWMAVGFAAVGVSVMAIGNGGLPWVSMAMATSFAIYGLVKKKA 184
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G +E+ +L +PA Y+ G G + L+G GL+ F+
Sbjct: 185 SLPVLLGLMLEVTLLVVPAAIYLGMRLADGVSTMQTGTTIEFGMLLGAGLITIAPLAFFA 244
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++R LS +GI++Y P L + + + +D R I F V ++++LL +
Sbjct: 245 AAVQRVDLSLMGILQYIGPTLQFLVGYVLFGETLDLPRKIGFVFVWTGLLIFLLASQFKR 304
Query: 309 GK 310
+
Sbjct: 305 RR 306
>gi|89100080|ref|ZP_01172949.1| Chloramphenicol-sensitive protein rarD [Bacillus sp. NRRL B-14911]
gi|89085170|gb|EAR64302.1| Chloramphenicol-sensitive protein rarD [Bacillus sp. NRRL B-14911]
Length = 308
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 84/301 (27%), Positives = 150/301 (49%), Gaps = 4/301 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G L+ +Y++WGI P+Y + L VS E+++ RV WS + +V
Sbjct: 2 TDTEVKQGALYAGLSYLIWGILPIYWKLLNHVSADEILASRVFWSFIFMLAVLVLTRKWP 61
Query: 79 ---SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ N K + L ++ +++ +W +I+A+ + Q S Y++ P++SV LG
Sbjct: 62 DFVRTLRGIRNNKKQMLALTIASLLISCNWFIYIWAVNSGQMIEASLGYYINPLVSVLLG 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
V LKE+L+ +Q ++ LL +LIMTL G P +++ +A+++ Y A+K I V S+
Sbjct: 122 IVVLKEKLSSVQAVSFLLAAAGVLIMTLSYGRFPWIAVVLALSFGLYGLAKKLIKVESAI 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G +E V+ AL Y+++ +G + F + L LIG G + F+ G ++
Sbjct: 182 GLTLETMVVMPLALGYLIYLFAAGKQSFLAISTGTDLLLIGAGAATAIPLLYFAKGAQKI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS +G ++Y AP L ++ +F+ + + F + +A+ VY L K K
Sbjct: 242 PLSMLGYLQYIAPTLTLLLGIFVYGEEFTKTHLVAFLFIWLALTVYSLSRTKLFANMKWK 301
Query: 315 K 315
Sbjct: 302 H 302
>gi|163801550|ref|ZP_02195448.1| putative chloramphenicol-sensitive protein RarD [Vibrio sp. AND4]
gi|159174467|gb|EDP59269.1| putative chloramphenicol-sensitive protein RarD [Vibrio sp. AND4]
Length = 301
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L ++++WG+ P+Y +FL S+ E+++ RV+ S+P ++ + +
Sbjct: 2 NNNLYGNLMAALSFVIWGLLPIYYRFLPNASMDELLALRVIGSVPVGAVIVLVVTRHMPK 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ K++ +++++ + W F +AL + S +F+ P++SV LG L
Sbjct: 62 WSAVWQDKKSLWYTYVASSLMCISWVAFTWALTNNRVIDASLGFFIGPLVSVALGVFILG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++L+ Q +A LL + +L G PL++L + + +S Y +K I S FIE
Sbjct: 122 DKLSKGQFVAILLAAVGVLYQVFQYGQLPLVALTMGLFFSLYGLFKKKINFDWSTTLFIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL AL Y++ + GE + +I + +G + +S I+ LSTV
Sbjct: 182 ALVLTPIALVYLIVKQLTAGELASMVDITTLMLYLGSAPVTILPLIFYSIAIRITNLSTV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G+M+Y P L V +V + + D+V+ + F + + ++ + V K K
Sbjct: 242 GLMQYIEPSLQFVLAVMVFGELFDSVKAVTFAFIWVGLLFSIFEGVAKISKRKR 295
>gi|84494909|ref|ZP_00994028.1| putative integral membrane protein [Janibacter sp. HTCC2649]
gi|84384402|gb|EAQ00282.1| putative integral membrane protein [Janibacter sp. HTCC2649]
Length = 319
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 135/294 (45%), Gaps = 4/294 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT + F AY +WG+ PLY LE E+++HR+LW+L ++ +
Sbjct: 13 RRGTAYAFAAYGIWGLFPLYFHALEPSGAFEILAHRILWTLLF-CVVVLVVRRDFGWVAS 71
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ PK + L +A ++A +W ++ A++T + + + YF+ P+++V LG L+ERL
Sbjct: 72 VVHRPKLLAGLTLAALLIAANWVVYVLAVITGRTYAAALGYFLNPIVTVGLGVFVLRERL 131
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEM 200
LQ A + ++ + +T+ G + + + + + +E
Sbjct: 132 RPLQWAAVTVGAVAAVYLTVAGGEFPWIAVTLAFSFAFYGLVKKKVGASLDAMHSLTVET 191
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
VLA A+ + W G F L+ G++ + F+ +R L T+G
Sbjct: 192 LVLAPVAVGVLFWLAAKGSTTFGGHGATHMTLLVAAGVVTAIPLLFFAAAARRIPLVTIG 251
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++++ P+L ++ V +L + + + FGIV IA+++ + ++ N+
Sbjct: 252 LIQFLTPMLQLLIGVVLLDEHVTGALWVGFGIVWIALLLLTIDSLRQGQTNRRN 305
>gi|49484889|ref|YP_042113.1| hypothetical protein SAR2776 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|221142450|ref|ZP_03566943.1| hypothetical protein SauraJ_12577 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|257424175|ref|ZP_05600604.1| RarD protein [Staphylococcus aureus subsp. aureus 55/2053]
gi|257426853|ref|ZP_05603255.1| rarD protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429489|ref|ZP_05605876.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus 68-397]
gi|257432136|ref|ZP_05608499.1| RarD protein [Staphylococcus aureus subsp. aureus E1410]
gi|257435097|ref|ZP_05611148.1| RarD protein [Staphylococcus aureus subsp. aureus M876]
gi|282907027|ref|ZP_06314875.1| RarD protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282910004|ref|ZP_06317812.1| transporter DMT superfamily protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282912252|ref|ZP_06320048.1| transporter DMT superfamily protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282912892|ref|ZP_06320684.1| protein RarD [Staphylococcus aureus subsp. aureus M899]
gi|282922520|ref|ZP_06330210.1| RarD protein [Staphylococcus aureus subsp. aureus C101]
gi|283959465|ref|ZP_06376906.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293497945|ref|ZP_06665799.1| RarD protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293511534|ref|ZP_06670228.1| RarD protein [Staphylococcus aureus subsp. aureus M809]
gi|293550144|ref|ZP_06672816.1| protein RarD [Staphylococcus aureus subsp. aureus M1015]
gi|295429276|ref|ZP_06821898.1| RarD protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297589225|ref|ZP_06947866.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus MN8]
gi|304379925|ref|ZP_07362654.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|49243018|emb|CAG41751.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257273193|gb|EEV05295.1| RarD protein [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276484|gb|EEV07935.1| rarD protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279970|gb|EEV10557.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus 68-397]
gi|257283015|gb|EEV13147.1| RarD protein [Staphylococcus aureus subsp. aureus E1410]
gi|257285693|gb|EEV15809.1| RarD protein [Staphylococcus aureus subsp. aureus M876]
gi|269942279|emb|CBI50694.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314741|gb|EFB45127.1| RarD protein [Staphylococcus aureus subsp. aureus C101]
gi|282322992|gb|EFB53311.1| protein RarD [Staphylococcus aureus subsp. aureus M899]
gi|282323948|gb|EFB54264.1| transporter DMT superfamily protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282326070|gb|EFB56375.1| transporter DMT superfamily protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329926|gb|EFB59447.1| RarD protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|283789057|gb|EFC27884.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919191|gb|EFD96267.1| protein RarD [Staphylococcus aureus subsp. aureus M1015]
gi|291096876|gb|EFE27134.1| RarD protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291465492|gb|EFF08024.1| RarD protein [Staphylococcus aureus subsp. aureus M809]
gi|295127035|gb|EFG56679.1| RarD protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297577736|gb|EFH96449.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus MN8]
gi|302752569|gb|ADL66746.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304341505|gb|EFM07415.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312436882|gb|ADQ75953.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
aureus subsp. aureus TCH60]
gi|315195203|gb|EFU25591.1| hypothetical protein CGSSa00_04047 [Staphylococcus aureus subsp.
aureus CGS00]
gi|329315412|gb|AEB89825.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus T0131]
Length = 302
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 145/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++ + E+++ R+++S+ + F +
Sbjct: 1 MNTEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSVIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLAKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|82752274|ref|YP_418015.1| hypothetical protein SAB2572c [Staphylococcus aureus RF122]
gi|82657805|emb|CAI82260.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 302
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 80/303 (26%), Positives = 144/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++ + E+++ R+++S+ + F +
Sbjct: 1 MNTEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSVIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLDRPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+ + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEAFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|332186565|ref|ZP_08388309.1| hypothetical protein SUS17_1672 [Sphingomonas sp. S17]
gi|332013548|gb|EGI55609.1| hypothetical protein SUS17_1672 [Sphingomonas sp. S17]
Length = 297
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 2/292 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L AYI WGI PLY + L+ V L+V++HR+LWSL + ++ G
Sbjct: 2 TTDRTARTGLLLGIGAYISWGILPLYLKLLKGVPALQVLAHRILWSLLLLAVVVLIARRG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++L +L SAT++A++W +I+++ S YF+ P+I+V LG
Sbjct: 62 RAILAAARGRTLL--LLCASATLIAINWLVYIWSVQNNHVLEASLGYFINPLINVALGVA 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER+ Q +A + L +L++T+ G + A+ + + + G
Sbjct: 120 LLGERIRRGQALAVGIAALGVLVLTISGGGAIWISLALALSFAFYGLVRKVAAIDALGGL 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+L V+++ + G F + L LI G + + +F+ +R + +
Sbjct: 180 TVETLLLAAPALAVLFHASANGTAAFGADRHLDLLLILAGAVTAAPLLMFAAAARRLRYA 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G+++Y AP L +V + +P+ V I F ++ +Y + +V S
Sbjct: 240 TLGLLQYLAPTLQFAQAVLLFGEPLRPVHIITFALIWTGCALYAIDSVRGSR 291
>gi|218550957|ref|YP_002384748.1| chloramphenicol resistance permease [Escherichia fergusonii ATCC
35469]
gi|218358498|emb|CAQ91145.1| putative chloramphenicol resistance permease [Escherichia
fergusonii ATCC 35469]
gi|325499213|gb|EGC97072.1| chloramphenicol resistance permease [Escherichia fergusonii ECD227]
Length = 296
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 79/294 (26%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 4 KQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WSY 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK ++ PK + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 63 LKTLIQTPKKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLG 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G IE
Sbjct: 123 ERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLIE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L A Y+ S H + L LI G++ + F+ R +LST+
Sbjct: 183 TMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTL 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 243 GFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK 296
>gi|218707452|ref|YP_002414971.1| putative chloramphenicol resistance permease [Escherichia coli
UMN026]
gi|293407445|ref|ZP_06651365.1| rarD [Escherichia coli FVEC1412]
gi|293413261|ref|ZP_06655923.1| RarD protein [Escherichia coli B354]
gi|298383185|ref|ZP_06992779.1| rarD [Escherichia coli FVEC1302]
gi|300900628|ref|ZP_07118788.1| protein RarD [Escherichia coli MS 198-1]
gi|301025735|ref|ZP_07189250.1| protein RarD [Escherichia coli MS 69-1]
gi|331665471|ref|ZP_08366370.1| protein RarD [Escherichia coli TA143]
gi|218434549|emb|CAR15478.1| putative chloramphenicol resistance permease [Escherichia coli
UMN026]
gi|284923927|emb|CBG37026.1| putative membrane protein [Escherichia coli 042]
gi|291425556|gb|EFE98594.1| rarD [Escherichia coli FVEC1412]
gi|291468209|gb|EFF10706.1| RarD protein [Escherichia coli B354]
gi|298276421|gb|EFI17940.1| rarD [Escherichia coli FVEC1302]
gi|300355879|gb|EFJ71749.1| protein RarD [Escherichia coli MS 198-1]
gi|300395858|gb|EFJ79396.1| protein RarD [Escherichia coli MS 69-1]
gi|331057369|gb|EGI29358.1| protein RarD [Escherichia coli TA143]
Length = 296
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSATSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK 296
>gi|254474365|ref|ZP_05087751.1| RarD protein [Ruegeria sp. R11]
gi|214028608|gb|EEB69443.1| RarD protein [Ruegeria sp. R11]
Length = 298
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 75/296 (25%), Positives = 149/296 (50%), Gaps = 1/296 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
++ ++ T G F AY++WG PLY + L + EV++HRVLWS+P +V
Sbjct: 3 QQKRENVDTPQGLAFAISAYLMWGFLPLYMKALSHMPAAEVVAHRVLWSVPVAGILLVVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L+ L++PK + M +A +++V+WG +++++ T + Y++ P+ SV L
Sbjct: 63 RRT-RDLQAALRSPKVLAMGCVTAALISVNWGIYVWSIATGHALDAALGYYINPLFSVML 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G++ L ERL Q++A L L+++++ + + + + K
Sbjct: 122 GALLLGERLTVAQLVAIGLAALAVVVLAVDARSLPWAAIGLTLSWGFYAFFKKSLPVGPN 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F+ ++ P + S G F G++ DT+ L+G G++ + ++ G K
Sbjct: 182 QGFMLEVLILTPPAIGYLVYLASTGGAHFGGDLGDTVLLVGCGVVTAVPLITYANGAKLL 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+LST+GI++Y AP ++ +++VF+ + R I F ++ +A+++Y V +
Sbjct: 242 RLSTIGILQYIAPTMIFLAAVFLFGEEFGRARMIAFPMIWLALIIYSTSLVRQMRR 297
>gi|163732766|ref|ZP_02140211.1| rarD protein, putative [Roseobacter litoralis Och 149]
gi|161394126|gb|EDQ18450.1| rarD protein, putative [Roseobacter litoralis Och 149]
Length = 298
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 87/299 (29%), Positives = 176/299 (58%), Gaps = 2/299 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++A + T G F AY LWG P+Y + L VS LEV++HRV+WS+P ++
Sbjct: 1 MKSAHVDTPQGFAFAVSAYFLWGFLPIYMKSLADVSPLEVLAHRVVWSIPIAAVVLIALG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ L +P+ + M +A +++ +WG +I+++++ + Y++ P+ SVFLG
Sbjct: 61 RT-KDLRAALASPRMLAMGAVTAALISANWGIYIWSIVSGNALEAALGYYINPLFSVFLG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+V L ERL+ ++ + L + +++I+T+ IP+++LA+ TW Y + ++++P+G ++
Sbjct: 120 AVLLGERLDKIKWASIALALSAVVILTVESGSIPIVALALTGTWGFYAYFKRSLPIGPNQ 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GF +E+ +L++PA ++ + +SG HF +GN ++ L+G G + + +++ G K
Sbjct: 180 GFLLEVLLLSVPAAGFIAYLAYSGTGHFMVGNAVNSWLLVGCGAVTAVPLMLYANGAKLL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+LST+G+++Y AP ++ + +VF+ + R I F ++ A+ +Y +G+ +
Sbjct: 240 RLSTIGMLQYIAPTMIFLIAVFVFGEQFGRARMIAFPMIWCALALYSYALWKEAGRARA 298
>gi|163746875|ref|ZP_02154232.1| RarD [Oceanibulbus indolifex HEL-45]
gi|161379989|gb|EDQ04401.1| RarD [Oceanibulbus indolifex HEL-45]
Length = 306
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 1/287 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
T G + A +WG++ ++ + L V EV++HR LWSL F ++ G L +
Sbjct: 4 TTKGIAAMIAACSIWGLSSIFYKLLSHVPAAEVLAHRTLWSLVF-FVILLTVQGRLRAVF 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D + +A G+L F+A ++A +W FI A+ + Q + Y++ P++SV LG + ER
Sbjct: 63 DAMAGLRAFGLLAFAALMIATNWYLFISAVQSGQATEAALGYYIFPLVSVLLGRLVYAER 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L+ +Q+ A L+ +++ ++T G K +
Sbjct: 123 LSLVQLFAVGLVSVAVSVLTYGLGTAPWLALALAASFGLYGLAKKRLAVGPVVSVTAEVL 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L P V+W G F + DT L+ G + + +FSY +R+ ++T G++
Sbjct: 183 LLSPLAVLVLWQTGDNGAGAFGVSFRDTALLMLAGPITATPLILFSYAARRSSMATAGLL 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y P L +V + ++P F ++ A+ +Y + T
Sbjct: 243 SYINPTLQFFCAVVLFQEPFTGWHVQAFVLIWCALALYSVSTFRQDK 289
>gi|323974399|gb|EGB69527.1| RarD protein [Escherichia coli TW10509]
Length = 296
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 4 KQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WSY 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 63 LKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLG 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G IE
Sbjct: 123 ERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLIE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L A Y+ S H + L LI G++ + F+ R +LST+
Sbjct: 183 TMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTL 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 243 GFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK 296
>gi|312969452|ref|ZP_07783654.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312285999|gb|EFR13917.1| conserved hypothetical protein [Escherichia coli 2362-75]
Length = 296
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L + +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLTFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK 296
>gi|239831514|ref|ZP_04679843.1| RarD protein [Ochrobactrum intermedium LMG 3301]
gi|239823781|gb|EEQ95349.1| RarD protein [Ochrobactrum intermedium LMG 3301]
Length = 306
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 151/291 (51%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY LWG P Y + L + +EV+SHRV+WS+P ++ +L
Sbjct: 16 RGFLMALGAYGLWGALPFYLKALGHIPAMEVVSHRVIWSVPVALLLLLALGQFRDILNAV 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + ++W +++A+ Q + Y++ P+ +V LG +FL ERL
Sbjct: 76 RQPRMLAMAALTAGL-ITINWSIYVWAVAHDQVMGAALGYYINPLFNVVLGGLFLGERLT 134
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q +A ++L++T++ G+P +SL + +T+ Y F RK++P+ +GF +E+ +L
Sbjct: 135 RVQYVAVGFAFAAVLLLTVNAGGLPWVSLVLPLTFGLYGFFRKSLPMPPLQGFTLEVLIL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IPAL YV+W +G +HFF G + L+ G + +++ G K + +T+G+M+
Sbjct: 195 CIPALGYVLWLAATGQDHFFTGPAFNVSMLLLAGPFTAIPLILYAGGAKLLRYTTLGLMQ 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P ++ ++FI +P + F ++ + +Y ++ + + K
Sbjct: 255 YMTPTMLFFFAIFIFNEPFSAAQLGAFALIWAGLALYTWSMLVEHRRGRAK 305
>gi|254292640|ref|YP_003058663.1| RarD protein, DMT superfamily transporter [Hirschia baltica ATCC
49814]
gi|254041171|gb|ACT57966.1| RarD protein, DMT superfamily transporter [Hirschia baltica ATCC
49814]
Length = 304
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 2/288 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L+ Y LWG PLY + LE+V LE++SHR+LWS+P + + ++
Sbjct: 12 GFLYALGCYFLWGGLPLYFKILEKVPALEMLSHRILWSVPTGILLVFFAGK-FDVIYAAF 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
KN K + L S ++ +W +I+A+ + S YF+ P+ S L ++F ER
Sbjct: 71 KNKKNLFWLTLSGILMGANWLIYIWAVQNGRVLEGSLGYFINPLFSFGLAAIFFGERFTK 130
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
QIIA LL +L L G A + S F+ ++ +
Sbjct: 131 FQIIAILLAAAGVLNQALVVGQFPWVAISLCVTFGVYGAIRKKVQVDSRAGFLFEVIILL 190
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
P + G+ G F + D++ + G++ + +F KR +LS++ +M+Y
Sbjct: 191 PIALAFLTYGWLNGRPFLATDPTDSILITLAGVVTAAPLIMFGLAAKRLRLSSLAMMQYI 250
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P + L + I FG + + ++++ + N + K
Sbjct: 251 GPTIQFCVG-IYLGEAFTPEHAITFGFIWLGVILFSFGALQNERRAKK 297
>gi|327440044|dbj|BAK16409.1| predicted permease [Solibacillus silvestris StLB046]
Length = 308
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 73/295 (24%), Positives = 144/295 (48%), Gaps = 4/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS- 79
G AY++WGI PLY + L+ V +E++ RV+WS ++
Sbjct: 2 SEQKKGVFLAIGAYLMWGIIPLYWKQLQHVGSVEILVGRVIWSFVFTVLFVLLIRQYKQM 61
Query: 80 --LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+K KN K +L ++ ++++WG FI+A+ TS Y++ P+ISV G +
Sbjct: 62 IVDIKMLWKNKKQFILLFVASVFVSLNWGIFIWAVNNGHLLQTSLGYYINPLISVLFGMI 121
Query: 138 FLKERLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
F KE+++ +A + + + L IP +SLA+A+T++ Y +K IP+ ++ G
Sbjct: 122 FFKEKISRATAVAVTIAAIGVGYQAVLGGTIPWVSLALALTFAFYGVIKKQIPLDATRGL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE + A+ ++ + F + L L+G G++ + +F+ ++ L
Sbjct: 182 AIETLFVLPIAVSIYIYLMNTSEIAFMHVDWKTNLLLMGGGIVTALPLVLFAKSAQKIPL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +++ AP + ++ +F+ K+P I F + +A+ ++ V+ + KN
Sbjct: 242 YLMGFIQFLAPTISLMLGIFLYKEPFTLTEFITFLCIWLAVFIFSASKVLEARKN 296
>gi|15925686|ref|NP_373220.1| rarD protein [Staphylococcus aureus subsp. aureus Mu50]
gi|15928281|ref|NP_375814.1| hypothetical protein SA2487 [Staphylococcus aureus subsp. aureus
N315]
gi|148269128|ref|YP_001248071.1| transporter DMT superfamily protein [Staphylococcus aureus subsp.
aureus JH9]
gi|150395210|ref|YP_001317885.1| transporter DMT superfamily protein [Staphylococcus aureus subsp.
aureus JH1]
gi|156981011|ref|YP_001443270.1| hypothetical protein SAHV_2680 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253316698|ref|ZP_04839911.1| hypothetical protein SauraC_11235 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007468|ref|ZP_05146069.2| hypothetical protein SauraM_13385 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793521|ref|ZP_05642500.1| RarD protein [Staphylococcus aureus A9781]
gi|258411173|ref|ZP_05681452.1| transporter DMT [Staphylococcus aureus A9763]
gi|258420922|ref|ZP_05683856.1| RarD protein [Staphylococcus aureus A9719]
gi|258438562|ref|ZP_05689785.1| transporter DMT superfamily protein [Staphylococcus aureus A9299]
gi|258443982|ref|ZP_05692320.1| transporter DMT superfamily protein [Staphylococcus aureus A8115]
gi|258446201|ref|ZP_05694361.1| transporter DMT superfamily protein [Staphylococcus aureus A6300]
gi|258449140|ref|ZP_05697246.1| transporter DMT superfamily protein [Staphylococcus aureus A6224]
gi|258454382|ref|ZP_05702350.1| transporter DMT superfamily protein [Staphylococcus aureus A5937]
gi|269204334|ref|YP_003283603.1| protein RarD [Staphylococcus aureus subsp. aureus ED98]
gi|282894261|ref|ZP_06302491.1| RarD protein [Staphylococcus aureus A8117]
gi|282927732|ref|ZP_06335346.1| RarD protein [Staphylococcus aureus A10102]
gi|295406844|ref|ZP_06816648.1| RarD protein [Staphylococcus aureus A8819]
gi|296275538|ref|ZP_06858045.1| protein RarD [Staphylococcus aureus subsp. aureus MR1]
gi|297245879|ref|ZP_06929741.1| RarD protein [Staphylococcus aureus A8796]
gi|13702653|dbj|BAB43793.1| SA2487 [Staphylococcus aureus subsp. aureus N315]
gi|14248471|dbj|BAB58858.1| RarD protein [Staphylococcus aureus subsp. aureus Mu50]
gi|147742197|gb|ABQ50495.1| RarD protein, DMT superfamily transporter [Staphylococcus aureus
subsp. aureus JH9]
gi|149947662|gb|ABR53598.1| RarD protein, DMT superfamily transporter [Staphylococcus aureus
subsp. aureus JH1]
gi|156723146|dbj|BAF79563.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|257787493|gb|EEV25833.1| RarD protein [Staphylococcus aureus A9781]
gi|257840058|gb|EEV64523.1| transporter DMT [Staphylococcus aureus A9763]
gi|257843112|gb|EEV67527.1| RarD protein [Staphylococcus aureus A9719]
gi|257848121|gb|EEV72113.1| transporter DMT superfamily protein [Staphylococcus aureus A9299]
gi|257850866|gb|EEV74810.1| transporter DMT superfamily protein [Staphylococcus aureus A8115]
gi|257855027|gb|EEV77970.1| transporter DMT superfamily protein [Staphylococcus aureus A6300]
gi|257857573|gb|EEV80468.1| transporter DMT superfamily protein [Staphylococcus aureus A6224]
gi|257863476|gb|EEV86236.1| transporter DMT superfamily protein [Staphylococcus aureus A5937]
gi|262076624|gb|ACY12597.1| protein RarD [Staphylococcus aureus subsp. aureus ED98]
gi|282590492|gb|EFB95570.1| RarD protein [Staphylococcus aureus A10102]
gi|282763306|gb|EFC03436.1| RarD protein [Staphylococcus aureus A8117]
gi|285818359|gb|ADC38846.1| RarD protein [Staphylococcus aureus 04-02981]
gi|294968309|gb|EFG44334.1| RarD protein [Staphylococcus aureus A8819]
gi|297177244|gb|EFH36497.1| RarD protein [Staphylococcus aureus A8796]
gi|312831035|emb|CBX35877.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129524|gb|EFT85516.1| hypothetical protein CGSSa03_11096 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725637|gb|EGG62116.1| protein RarD [Staphylococcus aureus subsp. aureus 21172]
Length = 302
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 145/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ G AYILWGI P+Y QF++ + E+++ R+++S + F +
Sbjct: 1 MNIEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSAIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|291287907|ref|YP_003504723.1| RarD protein, DMT superfamily transporter [Denitrovibrio
acetiphilus DSM 12809]
gi|290885067|gb|ADD68767.1| RarD protein, DMT superfamily transporter [Denitrovibrio
acetiphilus DSM 12809]
Length = 294
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 3/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G A+++WG P+Y + L V E+++HR++WS VF +V L
Sbjct: 4 SEKRTGFQSAVAAFVMWGALPMYWKLLHSVPAEEILAHRIIWSAVIVFIILVVQKR-LPE 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +K+ + + +++ S ++ +W +I+A+ + TS YF+ P++S+ LG +F +
Sbjct: 63 LFSLIKDKRTMLLMLGSGLLIGGNWFTYIWAVNHDRVLETSMGYFICPMVSILLGYIFFQ 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ A L I +L+M L G P+ + +AV++ Y RK I V G FIE
Sbjct: 123 EKIRGFMKPAVLFAIAGVLVMGLGYGKFPVTAFILAVSFGFYGLFRKKIDVKPLPGLFIE 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL PA Y+++ GG F + + + G R +L T+
Sbjct: 183 ATVLMPPAFIYLLYLHMHGGGVFLTNTHDTIYLVGTGIATSVPLLLFVV-GASRIRLGTI 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G ++Y AP + F+ +P+ + F ++ I +++Y+ +++ K
Sbjct: 242 GTLQYIAPTMGFFIGAFLYNEPLGGAKVTTFVLIWIGVILYMWQLYLDTRKQ 293
>gi|218288442|ref|ZP_03492732.1| RarD protein, DMT superfamily transporter [Alicyclobacillus
acidocaldarius LAA1]
gi|218241415|gb|EED08589.1| RarD protein, DMT superfamily transporter [Alicyclobacillus
acidocaldarius LAA1]
Length = 307
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 63/293 (21%), Positives = 135/293 (46%), Gaps = 2/293 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + F AY WG+ P Y E++S E++S+R+++S ++ ++ S+
Sbjct: 1 MTDRKGLWYAFLAYAGWGLLPAYWNVFERMSPYELLSYRMVFSAWTIWIWVLLARRVRSV 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ + ++ + ++ V+W FI A+ T +S Y++ P+++V G + +
Sbjct: 61 V-GVMREGRRARLMALGSLMITVNWLTFIVAVNTGHVVESSLGYYINPIVNVLFGLLLFR 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL+ Q A ++ + + IM G P L+LA+A ++ Y +K + + + E
Sbjct: 120 ERLDGWQWGALVVAMAGVGIMMGAYGQVPWLALALAGSFGLYGVVKKRVDADAVQSLTWE 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A Y+ L+ GL + +F+ KR L+T+
Sbjct: 180 TTLALPLAAAYLAATFAVHRVTVTQLTSWQMALLVLSGLFTAVPLLLFAMAAKRLSLATL 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
G+++Y +P L +V + + + I F + +A+ +Y + V N +++
Sbjct: 240 GMVQYISPTLQLVIGLAVDHEAFTRADAIGFACIWMALALYTISLVRNERRHR 292
>gi|324115718|gb|EGC09653.1| RarD protein [Escherichia coli E1167]
Length = 295
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ + + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 SLKTLIQTTQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|331649645|ref|ZP_08350727.1| protein RarD [Escherichia coli M605]
gi|281180868|dbj|BAI57198.1| conserved hypothetical protein [Escherichia coli SE15]
gi|330908120|gb|EGH36639.1| protein rarD [Escherichia coli AA86]
gi|331041515|gb|EGI13663.1| protein RarD [Escherichia coli M605]
Length = 296
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 2/292 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRR 293
>gi|331685540|ref|ZP_08386124.1| protein RarD [Escherichia coli H299]
gi|331077241|gb|EGI48455.1| protein RarD [Escherichia coli H299]
Length = 296
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 TKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ PK + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPKKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRTAK 296
>gi|157692640|ref|YP_001487102.1| DMT superfamily drug/metabolite transporter [Bacillus pumilus
SAFR-032]
gi|157681398|gb|ABV62542.1| DMT superfamily drug/metabolite transporter [Bacillus pumilus
SAFR-032]
Length = 301
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 150/293 (51%), Gaps = 4/293 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L+ ++ LWG+ PLY + +E +S E+++HR+LWS + ++Y
Sbjct: 4 QQQSKGVLYTAASFTLWGLFPLYWKLMEHISSGEILAHRILWSFVFMCGILLYLKQVRPA 63
Query: 81 ---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+K + + KA+ L+ SA +++V+W +I+A+ S Y++ P++SV LG +
Sbjct: 64 MQTVKGLMLDGKALFSLLLSAILISVNWYVYIWAVNHHLMLEASLGYYINPLVSVLLGII 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FLKERLN LQ IA L+ +++ T+ G P++++ +A ++ Y +K + S+ G
Sbjct: 124 FLKERLNKLQTIAILIAAAGVILSTIQYGSFPVVAILLAFSFGFYGLIKKRMSFTSAIGL 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE +LA AL Y+++ + L G+ + +FS G KR L
Sbjct: 184 TIETLLLAPAALVYLLFFLKEPVVTMNPNSFGSLGLLFFAGVFTAVPLLLFSEGAKRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
VGI++Y AP + + +F+ + + + + + F + +A++++ +
Sbjct: 244 YQVGILQYIAPTITLFLGLFVYHEHLSSAKIVTFLCIWVAILLFTTSQLRMKK 296
>gi|332084416|gb|EGI89612.1| hypothetical protein SB521682_4539 [Shigella boydii 5216-82]
Length = 296
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A + + Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSSAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRTSK 296
>gi|222150557|ref|YP_002559710.1| hypothetical protein MCCL_0307 [Macrococcus caseolyticus JCSC5402]
gi|222119679|dbj|BAH17014.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 299
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 75/298 (25%), Positives = 150/298 (50%), Gaps = 6/298 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G L+ AY+LWGI P Y + + + E++ HR++WS + + L+
Sbjct: 3 NTQKGVLYTALAYLLWGILPSYWRAVSSFNDYEILFHRIIWSFFFMIIVLAVTKKLSPLV 62
Query: 82 KDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K+T K + L+ ++ ++ +WG FI+A+ S Y++ P++S+ LG +F
Sbjct: 63 KETKSLFKRKREFIALIIASVVITFNWGIFIWAVNNNHVLQASLGYYINPLMSIALGFIF 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKER + +A LL + + MT G P++S+ +A++++ Y +K + + +
Sbjct: 123 LKERFTRTETLAILLAAIGVFYMTFSVGTFPIVSVTLALSFALYGLMKKVVNINALYSIT 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E I + ++ + + + GN ++ ++ G++ + +FS G KR LS
Sbjct: 183 LET--FFILPIAFLGIAILTADQKTYFGNNFESFLILFSGIVTAIPLILFSAGAKRIPLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
VG+++Y +P L+++ VF+ +P I FG + +++Y L + K++ K
Sbjct: 241 LVGLLQYISPTLILLQGVFMFDEPFTLTHAITFGCIWSGLMIYSLSKWMQYKKSRKIK 298
>gi|289704601|ref|ZP_06501033.1| protein RarD [Micrococcus luteus SK58]
gi|289558681|gb|EFD51940.1| protein RarD [Micrococcus luteus SK58]
Length = 339
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 4/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G F AY +WG+ PLY L +E++ R+ ++L + L L
Sbjct: 39 RGLALGFTAYFVWGLLPLYMAVLAPAGAVEIVVVRIGFALIFCLLLLTVMRR-LRELGTA 97
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L P G +A ++AV+W + ++ T S YF+ P+++V LG +FL ERL
Sbjct: 98 LATPGRWGATGLAAGVIAVNWLLYAVSVTTGNVLQASLGYFMNPLVNVLLGVLFLGERLR 157
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEGFFIEMC 201
Q +A + + ++++M+ G + R PV + E
Sbjct: 158 RGQWVAVGIAVAAVVVMSAAMGQVPWIALGLATSFGLYGFVKKRFPSPVHAVTAMTAETV 217
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + V +G + G G+L + +FS + L+T+G+
Sbjct: 218 VLIPVFVVGSVLLAQAGLLTTVTEGPGHFWLMAGLGVLTAVPLILFSAAARSLTLTTLGM 277
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++YTAP+L + +V +L + + R FG++ +++ V+ L + S +
Sbjct: 278 LQYTAPILQFLVAVTVLGEQMPAARWAGFGLIWVSLAVFTLDQLHASRLQRR 329
>gi|253733857|ref|ZP_04868022.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus TCH130]
gi|253728160|gb|EES96889.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus TCH130]
gi|329732447|gb|EGG68797.1| protein RarD [Staphylococcus aureus subsp. aureus 21193]
Length = 302
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++ + E+++ R+++S + F +
Sbjct: 1 MNTEYKKGIFLALSAYILWGILPIYWQFVDAIGAFEILAFRIIFSAIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQLDMNQLLGKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|15804411|ref|NP_290451.1| hypothetical protein Z5340 [Escherichia coli O157:H7 EDL933]
gi|15834003|ref|NP_312776.1| hypothetical protein ECs4749 [Escherichia coli O157:H7 str. Sakai]
gi|168763948|ref|ZP_02788955.1| RarD protein [Escherichia coli O157:H7 str. EC4501]
gi|168786661|ref|ZP_02811668.1| RarD protein [Escherichia coli O157:H7 str. EC869]
gi|217326056|ref|ZP_03442140.1| RarD protein [Escherichia coli O157:H7 str. TW14588]
gi|261225595|ref|ZP_05939876.1| hypothetical protein EscherichiacoliO157_13482 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255641|ref|ZP_05948174.1| hypothetical protein EscherichiacoliO157EcO_07388 [Escherichia coli
O157:H7 str. FRIK966]
gi|291285236|ref|YP_003502054.1| hypothetical protein G2583_4619 [Escherichia coli O55:H7 str.
CB9615]
gi|12518693|gb|AAG59015.1|AE005613_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13364225|dbj|BAB38172.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|189365947|gb|EDU84363.1| RarD protein [Escherichia coli O157:H7 str. EC4501]
gi|189373412|gb|EDU91828.1| RarD protein [Escherichia coli O157:H7 str. EC869]
gi|209753198|gb|ACI74906.1| hypothetical protein ECs4749 [Escherichia coli]
gi|209753200|gb|ACI74907.1| hypothetical protein ECs4749 [Escherichia coli]
gi|209753204|gb|ACI74909.1| hypothetical protein ECs4749 [Escherichia coli]
gi|217322277|gb|EEC30701.1| RarD protein [Escherichia coli O157:H7 str. TW14588]
gi|290765109|gb|ADD59070.1| hypothetical protein G2583_4619 [Escherichia coli O55:H7 str.
CB9615]
gi|320191086|gb|EFW65736.1| Protein rarD [Escherichia coli O157:H7 str. EC1212]
gi|320639304|gb|EFX08926.1| putative chloramphenical resistance permease RarD [Escherichia coli
O157:H7 str. G5101]
gi|320644689|gb|EFX13739.1| putative chloramphenical resistance permease RarD [Escherichia coli
O157:H- str. 493-89]
gi|320650014|gb|EFX18517.1| putative chloramphenical resistance permease RarD [Escherichia coli
O157:H- str. H 2687]
gi|320655361|gb|EFX23303.1| putative chloramphenical resistance permease RarD [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320660986|gb|EFX28429.1| putative chloramphenical resistance permease RarD [Escherichia coli
O55:H7 str. USDA 5905]
gi|320666110|gb|EFX33124.1| putative chloramphenical resistance permease RarD [Escherichia coli
O157:H7 str. LSU-61]
gi|326347895|gb|EGD71609.1| Protein rarD [Escherichia coli O157:H7 str. 1044]
Length = 295
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRK 294
>gi|149202242|ref|ZP_01879215.1| RarD [Roseovarius sp. TM1035]
gi|149144340|gb|EDM32371.1| RarD [Roseovarius sp. TM1035]
Length = 298
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 71/294 (24%), Positives = 137/294 (46%), Gaps = 1/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L + +WG++ +Y + L+ + +E+++HR LWS ++ +S+
Sbjct: 2 REATKGILAMVATCSVWGLSGIYYKLLDHIPPIEILAHRTLWSFIFFALVLLVQGR-ISV 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ TL K+V ++ F+A +++ +W FI ++ + S Y++ P+++V LG++ +
Sbjct: 61 LRQTLGARKSVLLIGFAALMISTNWFVFITSIQIGKAVEASLGYYIFPLVAVLLGAIAFR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL Q+ A L +++ +T+ G+P I T + K
Sbjct: 121 ERLGKAQLFAVALAATAVITLTIGLGVPPWIALILATSFGFYGLVKKGLSVGPVVSVTAE 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L P V+W S G F N D+L L G+L + +FSY KR L+TVG
Sbjct: 181 VLLLSPIALGVLWWFHSDGHGAFGTNWHDSLLLAFSGILTASPLIMFSYATKRITLATVG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+++Y P L + + + ++ I FG++ A+ +Y ++ +
Sbjct: 241 LVQYMNPSLQFLVATLLFREAFSFWHAIAFGMIWSALAIYTTASLRQDRAARRA 294
>gi|163744076|ref|ZP_02151442.1| RarD [Phaeobacter gallaeciensis 2.10]
gi|161382623|gb|EDQ07026.1| RarD [Phaeobacter gallaeciensis 2.10]
Length = 296
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 146/294 (49%), Gaps = 1/294 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + T G F AY++WG PLY + L + EV++HRV+WS+P ++
Sbjct: 3 QPENKDTPQGLAFAVSAYLMWGFLPLYMKALAHMPAAEVVAHRVIWSVPVAGALLIILRR 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+ L +P+ + M +A +++V+WG +++++ T + Y++ P+ SV LG+
Sbjct: 63 T-RDLRAALTSPRVLMMGAVTAALISVNWGIYVWSIATGHALDAALGYYINPLFSVMLGA 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V L ERL+ Q++A L L++L++ L +G + + K
Sbjct: 122 VLLGERLSPAQLVAIGLAALAVLVLALDAGRLPWAAIGLTLSWGFYAFFKKSLPVGPNQG 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F+ ++ P + G F G+ DT L+G G++ + ++ G K +L
Sbjct: 182 FMLEVLILTPPALAYLAYLTVTGGAHFGGDFSDTALLLGCGVVTAVPLITYANGAKLLRL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
ST+GI++Y AP ++ +++VF+ + R I F ++ +A+V+Y + + +
Sbjct: 242 STIGILQYIAPTMIFLAAVFVFGEEFGRARMIAFPMIWLALVIYSVSLLRQMRR 295
>gi|24115115|ref|NP_709625.1| hypothetical protein SF3897 [Shigella flexneri 2a str. 301]
gi|30064884|ref|NP_839055.1| hypothetical protein S3858 [Shigella flexneri 2a str. 2457T]
gi|91213344|ref|YP_543330.1| hypothetical protein UTI89_C4382 [Escherichia coli UTI89]
gi|110644144|ref|YP_671874.1| hypothetical protein ECP_4013 [Escherichia coli 536]
gi|110807489|ref|YP_691009.1| hypothetical protein SFV_3679 [Shigella flexneri 5 str. 8401]
gi|117626078|ref|YP_859401.1| putative chloramphenical resistance permease [Escherichia coli APEC
O1]
gi|218560883|ref|YP_002393796.1| chloramphenicol resistance permease [Escherichia coli S88]
gi|237702829|ref|ZP_04533310.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|306815142|ref|ZP_07449295.1| putative chloramphenicol resistance permease [Escherichia coli
NC101]
gi|331655505|ref|ZP_08356498.1| protein RarD [Escherichia coli M718]
gi|24054384|gb|AAN45332.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30043144|gb|AAP18866.1| hypothetical protein S3858 [Shigella flexneri 2a str. 2457T]
gi|91074918|gb|ABE09799.1| hypothetical protein RarD [Escherichia coli UTI89]
gi|110345736|gb|ABG71973.1| hypothetical protein RarD [Escherichia coli 536]
gi|110617037|gb|ABF05704.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115515202|gb|ABJ03277.1| putative chloramphenical resistance permease [Escherichia coli APEC
O1]
gi|218367652|emb|CAR05437.1| putative chloramphenicol resistance permease [Escherichia coli S88]
gi|222035517|emb|CAP78262.1| Protein rarD [Escherichia coli LF82]
gi|226903000|gb|EEH89259.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|281603214|gb|ADA76198.1| putative permease [Shigella flexneri 2002017]
gi|294491678|gb|ADE90434.1| RarD protein [Escherichia coli IHE3034]
gi|305851511|gb|EFM51965.1| putative chloramphenicol resistance permease [Escherichia coli
NC101]
gi|307628882|gb|ADN73186.1| putative chloramphenicol resistance permease [Escherichia coli
UM146]
gi|312948372|gb|ADR29199.1| putative chloramphenicol resistance permease [Escherichia coli
O83:H1 str. NRG 857C]
gi|313647136|gb|EFS11591.1| hypothetical protein SF2457T_4509 [Shigella flexneri 2a str. 2457T]
gi|315284758|gb|EFU44203.1| protein RarD [Escherichia coli MS 110-3]
gi|323949297|gb|EGB45187.1| RarD protein [Escherichia coli H252]
gi|323954026|gb|EGB49824.1| RarD protein [Escherichia coli H263]
gi|331046826|gb|EGI18910.1| protein RarD [Escherichia coli M718]
gi|332750949|gb|EGJ81354.1| hypothetical protein SF434370_3876 [Shigella flexneri 4343-70]
gi|332751039|gb|EGJ81443.1| hypothetical protein SFK671_4318 [Shigella flexneri K-671]
gi|332752291|gb|EGJ82682.1| hypothetical protein SF274771_4331 [Shigella flexneri 2747-71]
gi|332764335|gb|EGJ94570.1| hypothetical protein SF293071_4217 [Shigella flexneri 2930-71]
gi|332998170|gb|EGK17773.1| hypothetical protein SFK218_4716 [Shigella flexneri K-218]
gi|333013526|gb|EGK32895.1| hypothetical protein SFK304_4617 [Shigella flexneri K-304]
Length = 296
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRTSK 296
>gi|332304590|ref|YP_004432441.1| RarD protein, DMT superfamily transporter [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332171919|gb|AEE21173.1| RarD protein, DMT superfamily transporter [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 302
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 1/289 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G LF AY +WGI P+Y + + QV +E++ HR++WS+ + + ++ +K +
Sbjct: 9 GVLFAIAAYTMWGIAPMYFKLIGQVPAMEILMHRIIWSVLVLVLLVAVTGK-INKVKQAI 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
NPK + +L+ S +LA +W FI+A+ S Y++ P+++VFLG +FL ERL
Sbjct: 68 LNPKVMQILLISGLLLAANWFIFIWAINNNHLLDASLGYYINPLLNVFLGRLFLGERLRR 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+Q +A L + + + G + S + V +
Sbjct: 128 MQKVAVGLALSGVAYFIVSYGQLPWVALALAGTFGIYGLLRKQVAVDSLPGLLIESVFLL 187
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
P + ++P + LI G++ + F+ KR ST+G +Y
Sbjct: 188 PPAIVYWIWFAGEYSNMLTNDLPLNITLICAGIVTTAPLLCFTAAAKRIMFSTLGFFQYI 247
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P LM V + + +P+D + ++F V +A+ ++ ++ K K
Sbjct: 248 GPSLMFVLAAAVYGEPLDNSKLVMFAFVWLALGLFSYDSLRQYQKVKKA 296
>gi|223043664|ref|ZP_03613708.1| RarD protein [Staphylococcus capitis SK14]
gi|222442942|gb|EEE49043.1| RarD protein [Staphylococcus capitis SK14]
Length = 300
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 70/302 (23%), Positives = 140/302 (46%), Gaps = 7/302 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G F AY+LWGI P+Y + ++ + E+++ R+++S+ + +V
Sbjct: 1 MTSEYKKGIFFALGAYVLWGILPIYWELIDHIGAFEILAFRIIFSMIFMILLLVVGRKQR 60
Query: 79 SLLKDTLKNPKAVGML----VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + ++ ++WG FI+A+ +S Y++ P++S+ L
Sbjct: 61 EAFLRDVNQLFTHPVQLVAIIVAGYVITINWGTFIWAVTNGHVLQSSLGYYINPLVSIVL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A + ++ +L MT+ G P +S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAIIFALIGVLYMTIKIGEFPFVSIMLALSFGVYGLLKKIVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A + YV++ F L G + +FS G KR
Sbjct: 181 SSIAIECIVTAPAGIIYVIYLWQQHHMTFGFNMSSFWLVFSGAVT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS G ++Y P +M + +F+ K+ D + I F + I +++Y + +N +N
Sbjct: 239 IPLSLTGFIQYVGPTIMFILGIFVFKEKFDVHQLITFIFIWIGIILYSISQYMNIKRNPI 298
Query: 314 KK 315
K
Sbjct: 299 AK 300
>gi|126741333|ref|ZP_01757010.1| RarD [Roseobacter sp. SK209-2-6]
gi|126717589|gb|EBA14314.1| RarD [Roseobacter sp. SK209-2-6]
Length = 301
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 90/302 (29%), Positives = 168/302 (55%), Gaps = 5/302 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ T G F AY++WG P Y + + + EV++HRVLWS+P ++
Sbjct: 2 TPTENRDTPQGLAFAISAYVMWGFLPFYMKAVAHIPAAEVVAHRVLWSVPVAGLLLILLK 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ L +P+ + M +A +++V+WG +++A+ + + Y++ P+ S+ LG
Sbjct: 62 RT-KDLRAALTSPRTLLMGCLTAALISVNWGIYVWAIASGNALEAALGYYINPLFSIALG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ L+ERL Q+ A L L++L++TL +G PL+++++ ++W Y F +K +PVG ++
Sbjct: 121 ALLLRERLAPAQLAAIALAALAVLVLTLAAGRLPLVAVSLTLSWGFYAFFKKQLPVGPNQ 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GF +E+ +L PAL Y+ + G HF + D L+G GL+ + ++ G K
Sbjct: 181 GFMLEVLILTPPALGYLAYASSQGDIHF---SGWDVPLLLGAGLVTAVPLITYANGAKLL 237
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+LST+GI++Y AP ++ + +VF+ + R I F ++ A+V+Y +P V K
Sbjct: 238 RLSTIGILQYIAPTMIFLIAVFVFGEEFGGARMIAFPMIWAALVIYSVPLVRQLRAQKAA 297
Query: 315 KS 316
++
Sbjct: 298 EA 299
>gi|269794098|ref|YP_003313553.1| rarD protein [Sanguibacter keddieii DSM 10542]
gi|269096283|gb|ACZ20719.1| rarD protein [Sanguibacter keddieii DSM 10542]
Length = 314
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 71/304 (23%), Positives = 140/304 (46%), Gaps = 4/304 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+A+ T G +Y +WG PLY L+ LE+I+HR++WSL ++
Sbjct: 10 TTSATGSTRWGLTLGIASYAMWGTLPLYFPLLQPAGALEIIAHRIVWSLLFCLVLLLATR 69
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + L++ + + +L +A ++A +W +++A+ + + YF+ P+++V L
Sbjct: 70 QMRGYV-EVLRSGRMLAVLAAAAVLVAANWTIYVFAVTSDHVVDAALGYFINPLVTVLLA 128
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS---LAIAVTWSAYCFARKTIPVGS 192
+ LKERL Q +A +++++T+ G +A + + R V +
Sbjct: 129 VLVLKERLRPAQWVALGFGAAAVVVITVGLGTVPWVALGVAFSFGFYGLLKNRAGRTVPA 188
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G +E VLA A Y+VW G F L L+ G++ + F +
Sbjct: 189 IPGLAVETTVLAPVAALYLVWLATQGTSTFLQHGSGHALLLVSSGVVTALPLLCFGAAAR 248
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
LS VG+++Y AP++ + V + + + VR + F +V A+VV + + ++
Sbjct: 249 LLPLSVVGMLQYIAPIMQLALGVLVFHEAMPLVRWVGFSLVWCALVVLTVDALRAMRVSR 308
Query: 313 TKKS 316
++
Sbjct: 309 LARA 312
>gi|260846405|ref|YP_003224183.1| putative chloramphenical resistance permease RadD [Escherichia coli
O103:H2 str. 12009]
gi|257761552|dbj|BAI33049.1| predicted chloramphenical resistance permease RadD [Escherichia
coli O103:H2 str. 12009]
Length = 295
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + +
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQWF- 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRK 294
>gi|194016959|ref|ZP_03055572.1| RarD protein [Bacillus pumilus ATCC 7061]
gi|194011565|gb|EDW21134.1| RarD protein [Bacillus pumilus ATCC 7061]
Length = 301
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 150/293 (51%), Gaps = 4/293 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L+ ++ LWG+ PLY + +E +S E+++HR+LWS + ++Y
Sbjct: 4 QQQSKGVLYTAASFTLWGLFPLYWKLMEHISSGEILAHRILWSFVFMCGILLYLKQVRPA 63
Query: 81 ---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+K + + KA+ L+ SA +++V+W +I+A+ S Y++ P++SV LG +
Sbjct: 64 MQTVKGLMLDGKALFSLLLSAILISVNWYVYIWAVNHHLMLEASLGYYINPLVSVLLGII 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FLKERLN LQ IA L+ +++ T+ G P++++ +A ++ Y +K + S+ G
Sbjct: 124 FLKERLNKLQTIAILIAAAGVILSTIQYGSFPVVAILLAFSFGFYGLIKKRMSFTSAIGL 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE +LA AL Y+++ + L G+ + +FS G K+ L
Sbjct: 184 TIETLLLAPAALVYLLFFLKEPVVTMNPNSFGSLGLLFFAGVFTAVPLLLFSEGAKKIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
VGI++Y AP + + +F+ + + + + + F + +A++++ +
Sbjct: 244 YQVGILQYIAPTITLFLGLFVYHEHLSSAKIVTFLCIWVAILLFTTSQLRMKK 296
>gi|330812201|ref|YP_004356663.1| hypothetical protein PSEBR_a5186 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380309|gb|AEA71659.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 295
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 141/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ P+Y + + V +E+I HRVLWS ++ +
Sbjct: 2 QAANPRRGYILGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWSALFGAVLLMVWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRELRDNPQRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL +Q +A L + + +P +SL +A+T+ Y RK PV + G
Sbjct: 121 LGERLRRMQWLAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L A+ ++++N + + +L+ G + F+ + +
Sbjct: 181 VETWMLVPIAIAWLLFNPTATSAQAAFWTTSEAWWLVAAGPVTLVPLVCFNAATRHLPYT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + + + F + + VY + VI+ +
Sbjct: 241 TIGFLQYIAPTLVLLLAVTLFGEHLSSSTLVAFLFIWAGLAVYSVDAVISMRRR 294
>gi|170769843|ref|ZP_02904296.1| RarD protein [Escherichia albertii TW07627]
gi|170121281|gb|EDS90212.1| RarD protein [Escherichia albertii TW07627]
Length = 296
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 80/292 (27%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + ++ S S
Sbjct: 3 TKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-VLMSISRQWS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ PK + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPKKILMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPMAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRR 293
>gi|295704086|ref|YP_003597161.1| RarD protein [Bacillus megaterium DSM 319]
gi|294801745|gb|ADF38811.1| RarD protein [Bacillus megaterium DSM 319]
Length = 308
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 79/291 (27%), Positives = 149/291 (51%), Gaps = 4/291 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG-- 77
G ++ AY++WG+ PLY + L +V+ E+++HRV+WS + ++
Sbjct: 3 QDSKRAGIVYTASAYVMWGLFPLYWKLLGEVNANEILAHRVIWSFVFMLLLLLVTKQMSA 62
Query: 78 -LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L +N K +L ++ +++++W +I+A+ TS Y++ P++S+ LG
Sbjct: 63 LKKTLGLLFRNTKQAVILFVASVLISINWFVYIWAVNHNHIIETSLGYYINPLVSILLGI 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V LKE+LN Q + L + +++MT+ G P +SL++A ++ Y +KTI + + G
Sbjct: 123 VVLKEKLNFWQGASVGLAAIGVIVMTVTYGHIPWVSLSLAFSFGLYGLVKKTIQLEAKVG 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
IE ++A A+ Y ++ G F L ++ + LIG G+ + F+ G
Sbjct: 183 LTIETMMVAPIAVIYFIFLLVKGSSSFSLESLDLSALLIGGGVATAMPLLYFAKGAPLIP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
LS VG ++Y AP + ++ VF+ +P +V I F + V+++L
Sbjct: 243 LSMVGFLQYIAPTMTLLLGVFVYHEPFSSVEMIAFLFIWGGSVMFILSKTK 293
>gi|294635525|ref|ZP_06714005.1| protein RarD [Edwardsiella tarda ATCC 23685]
gi|291091094|gb|EFE23655.1| protein RarD [Edwardsiella tarda ATCC 23685]
Length = 315
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 2/286 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L ++ILWGITPLY + L + E+++ R+ WS+P + + F + +
Sbjct: 6 GPLLAVLSFILWGITPLYYKLLNDANAFELLAQRLFWSVPLLLALRLLFKQ-RTTWRAVW 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ +++ + I++V W FIYAL S YF P+ ++ LG +FL +RL
Sbjct: 65 QDKRSLYCCLLGGAIMSVSWTTFIYALTHNLVLDASLGYFTNPLFAIALGVIFLHDRLTP 124
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A LL I+ L + G P+L+L + +T++ Y RK I +E +
Sbjct: 125 FQRLAVLLAIIGLGYQIILLGRVPVLALVMGITFAFYGLVRKYIRYDIMTSLTLETLWML 184
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ W +G + L I + +F+ IKR L+ VG+ +Y
Sbjct: 185 PLAIGITFWLQLNGESGLTGISSTHYLLYILTAPVTYAPLLLFAAAIKRTSLTVVGLAQY 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P L + +V + +PI+ + + F ++ + + + + I +
Sbjct: 245 VEPSLQFLLAVLLFGEPINVAKMVSFSLIWLGLALCIYEIFIIMRR 290
>gi|191174261|ref|ZP_03035770.1| RarD protein [Escherichia coli F11]
gi|300979422|ref|ZP_07174551.1| protein RarD [Escherichia coli MS 200-1]
gi|190905444|gb|EDV65074.1| RarD protein [Escherichia coli F11]
gi|300308013|gb|EFJ62533.1| protein RarD [Escherichia coli MS 200-1]
gi|324014662|gb|EGB83881.1| protein RarD [Escherichia coli MS 60-1]
Length = 296
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTSMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRTSK 296
>gi|169827788|ref|YP_001697946.1| protein rarD [Lysinibacillus sphaericus C3-41]
gi|168992276|gb|ACA39816.1| Protein rarD [Lysinibacillus sphaericus C3-41]
Length = 305
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 152/296 (51%), Gaps = 4/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G L F AY WG PLY + LE V +E++ RV+WS A++ F
Sbjct: 2 AMSNEKKGVLAAFFAYAFWGAFPLYWKLLEHVPSMEILLSRVIWSFVFTVLAVIVFRMRK 61
Query: 79 ---SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ LK + K L ++ +++++W +I+A+ TS Y++ P++SV G
Sbjct: 62 DLIADLKYLWSHQKHFWQLAGASFVISMNWYLYIWAVTHNHLIETSLGYYINPLLSVIFG 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+F KE L+ Q +A + L+++I+T++ G +P ++L IA++++ Y +K I + ++
Sbjct: 122 VIFFKESLSRAQWVATGIAFLAVIILTINYGSVPWVALLIALSFAIYGVLKKKITLDATR 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G IE ++ AL Y V+ + F ++ + +I GL+ + +F+ G +
Sbjct: 182 GLAIETLLILPFALGYYVYLFSTHQASFLHVDVKTDILMIFSGLVTAVPLILFAKGAQNI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L +G ++Y +P ++++ + + K+P + F I+ A++++ +I + K
Sbjct: 242 PLYLLGFIQYVSPTIVLILGIVLYKEPFSQTELLAFSIIWAALLLFSGSKIIETRK 297
>gi|228992263|ref|ZP_04152196.1| chloramphenicol-sensitive RarD protein [Bacillus pseudomycoides DSM
12442]
gi|228767516|gb|EEM16146.1| chloramphenicol-sensitive RarD protein [Bacillus pseudomycoides DSM
12442]
Length = 313
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 71/303 (23%), Positives = 148/303 (48%), Gaps = 4/303 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---V 72
E+ G L+ AY++WG+ P+Y +++ +V E+++HR++W+ + +
Sbjct: 1 MESQKALQKQGVLYAAGAYMMWGVLPIYWKWVGEVPAEEILAHRIVWAFVFMLLILGVSR 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S L K PK + L ++ +++ +W +I+A+ S Y++ P++S+
Sbjct: 61 RLGQFQSELVSLFKRPKLLISLTIASVLISGNWFVYIWAVNQNHIIEASLGYYINPLVSI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVG 191
LG+V LKE+LN Q +A L + ++I+ G IP ++L++A T+ Y +K +
Sbjct: 121 LLGTVVLKEKLNFWQYVAVGLAGIGVIILAFRYGSIPWIALSLAFTFGLYGLTKKLLNYD 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G +E ++ A Y+V G G F + TL L+G G + + F+ G
Sbjct: 181 AMIGLTMETMIVTPLAFIYLVMIGEHGFGSFGSISFTSTLILMGAGTVTALPLFYFAKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ L +G ++Y +P + ++ VF+ + + F + +A++++ + +
Sbjct: 241 QLIPLYMIGFLQYISPTINLILGVFVFHEHFTSAHMTAFFFIWVALLIFSVAKTKFLLRK 300
Query: 312 KTK 314
+ K
Sbjct: 301 QPK 303
>gi|315121768|ref|YP_004062257.1| hypothetical protein CKC_00090 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495170|gb|ADR51769.1| hypothetical protein CKC_00090 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 311
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 200/311 (64%), Positives = 255/311 (81%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV 60
M G KK+ +N + T+ G L V A+I WG+TPLYTQFLE+VSVLEVISHR+
Sbjct: 1 MQNGVNKKQDFSKKLDKNGNQTTITGLLCVLFAFIAWGMTPLYTQFLEKVSVLEVISHRI 60
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
LWSLPGVFFA+VYFSGGLSLLK TLKNPK + ML+ SA +LA HW F+YALL+RQG T
Sbjct: 61 LWSLPGVFFAVVYFSGGLSLLKSTLKNPKTLFMLMVSAALLASHWSVFVYALLSRQGLAT 120
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA 180
S S+FVTPV ++ LG++FLKERLN LQIIAA+ I+ +++IMT+++GIP+LSLAIAVTWSA
Sbjct: 121 SLSFFVTPVFALSLGAIFLKERLNLLQIIAAINIVAAMVIMTIYNGIPMLSLAIAVTWSA 180
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
YCFARKTIPV S+EGFFIEMC+LA+PALFYV+W + HFF+ N +T FL+GYGLLN
Sbjct: 181 YCFARKTIPVNSNEGFFIEMCILAVPALFYVIWLIVADKNHFFMHNTQETFFLMGYGLLN 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S +FC+F+YGIKR KL+TVG+MEY APLLM ++VFILKQPI+TV +VF +V++AM++Y
Sbjct: 241 SIIFCVFAYGIKRTKLTTVGLMEYIAPLLMAANTVFILKQPINTVNIVVFSMVIVAMIIY 300
Query: 301 LLPTVINSGKN 311
+LPT++N+ K+
Sbjct: 301 VLPTILNNKKS 311
>gi|261419828|ref|YP_003253510.1| RarD protein, DMT superfamily transporter [Geobacillus sp.
Y412MC61]
gi|319766643|ref|YP_004132144.1| RarD protein, DMT superfamily transporter [Geobacillus sp.
Y412MC52]
gi|261376285|gb|ACX79028.1| RarD protein, DMT superfamily transporter [Geobacillus sp.
Y412MC61]
gi|317111509|gb|ADU94001.1| RarD protein, DMT superfamily transporter [Geobacillus sp.
Y412MC52]
Length = 309
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 4/299 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGG 77
G L+ +Y+LWG PLY + LE LE+++HR++WS + +
Sbjct: 5 SEEKQGILYTAASYLLWGALPLYWKLLEARPALEILAHRIVWSFVFMAILLAATGQLGAF 64
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + P + +A +++ +W +I+A+ TS Y++ P++SV LG++
Sbjct: 65 RRELRAMRRRPAKARGIAAAAALISANWFVYIWAVNHHHVVETSLGYYINPLVSVALGTI 124
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L+ERL+ Q A L + MT G P +++++A+T+ Y +K V SS G
Sbjct: 125 VLRERLSVGQWAAVFLAAAGVAAMTAEYGAFPWVAISLALTFGFYGLVKKLASVDSSIGL 184
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E + + Y++W L G G + F+ G KR +
Sbjct: 185 TLETMAVMPLSAVYLLWVYNETPALVKTAEWWQWALLAGAGPATAVPLLYFAKGAKRVSM 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+T+G ++Y +P + ++ VF+ +P F + A++++ + + K K
Sbjct: 245 TTLGFLQYISPTISLLLGVFLFGEPFTKAHFYAFSCIWAALILFSAVQIKQAPGRKKWK 303
>gi|288554490|ref|YP_003426425.1| hypothetical protein BpOF4_07375 [Bacillus pseudofirmus OF4]
gi|288545650|gb|ADC49533.1| hypothetical protein BpOF4_07375 [Bacillus pseudofirmus OF4]
Length = 317
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 3/305 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+G AYILWGI PLY + LE V+ EV+++R++WSL + +
Sbjct: 3 QSNTQHSEQKIGITAAIFAYILWGILPLYWKQLEHVTPGEVLAYRIIWSLVFMVGILALR 62
Query: 75 SGGLSLLKDTLK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+++ + + K ++ ++ + ++W FI+A+ + S Y++ P+++
Sbjct: 63 GQIGFFVQEVKRLLTSKKQTIGMISASVFITLNWFVFIWAVTNERMVEASLGYYINPLVN 122
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
V L +FLKER Q ++ L + + +MT++ G+ + + K +
Sbjct: 123 VLLAMIFLKERFTRWQGVSFALAFIGVTLMTVYYGVIPYASFLLAITFGIYGLMKKLVNV 182
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ +L P VW F ++ + LIG G + +FS G
Sbjct: 183 GALVGLTIETMLMTPFALLYVWFAKPEAGIFSAHSLETWMLLIGAGAATAIPLLLFSVGA 242
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
KR LS +G ++Y P LM++ VF+ K+P ++ F + I ++++ K
Sbjct: 243 KRISLSLIGFLQYIGPTLMLLFGVFLYKEPFSLIQLAAFIFIWIGLLIFTTSGTPAFKKL 302
Query: 312 KTKKS 316
++S
Sbjct: 303 TARRS 307
>gi|194434050|ref|ZP_03066320.1| RarD protein [Shigella dysenteriae 1012]
gi|194417708|gb|EDX33807.1| RarD protein [Shigella dysenteriae 1012]
gi|332084993|gb|EGI90175.1| hypothetical protein SD15574_4620 [Shigella dysenteriae 155-74]
Length = 296
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGAYKMVTFTFIWVALAIFVMDAIYTQRRTSK 296
>gi|319948505|ref|ZP_08022637.1| putative integral membrane protein [Dietzia cinnamea P4]
gi|319437802|gb|EFV92790.1| putative integral membrane protein [Dietzia cinnamea P4]
Length = 310
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 65/273 (23%), Positives = 134/273 (49%), Gaps = 4/273 (1%)
Query: 34 YILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
Y LWG P + LE +E+++HR++WS + + G + + +
Sbjct: 24 YTLWGFFPAFFPLLEPAGAVEILAHRIVWSFVVMAIVVTLLRGWRRVRAV---DRVSWAR 80
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
+ +A ++ +WG ++YA+ + + + Y + P++SV LG + +ERL+ Q +A L
Sbjct: 81 IGGAAVFVSANWGVYVYAVNSERVTEAALGYTINPLVSVLLGVIVFRERLSRPQWLAVAL 140
Query: 154 IILSLLIMTLHSGIPLL-SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
++++ ++T G S+ +AV++ Y +K + V G E+ V A+ ++V
Sbjct: 141 AVVAVGVLTAGYGHFPYLSVILAVSFGLYGVFKKKLRVDPVTGILGEVAVTTPVAVAFLV 200
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
W G SG F + L GL+ +F+ +R L+TVG+++Y P+L +
Sbjct: 201 WLGASGAGTFTGHGAGHSALLAASGLVTVVPLLLFAVAAQRIPLATVGMLQYIVPVLQMA 260
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ + +D V+ + F ++ A++ + L
Sbjct: 261 WGLLVVGERLDAVQWVGFALIWTAVIAFTLAGR 293
>gi|332998233|gb|EGK17835.1| hypothetical protein SFK272_4422 [Shigella flexneri K-272]
gi|333013774|gb|EGK33137.1| hypothetical protein SFK227_4354 [Shigella flexneri K-227]
Length = 296
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPMAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRTSK 296
>gi|314934835|ref|ZP_07842194.1| protein RarD [Staphylococcus caprae C87]
gi|313652765|gb|EFS16528.1| protein RarD [Staphylococcus caprae C87]
Length = 300
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 70/302 (23%), Positives = 140/302 (46%), Gaps = 7/302 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G F AY+LWGI P+Y + ++ + E+++ R+++S+ + +V
Sbjct: 1 MTSEYKKGIFFALGAYVLWGILPIYWELIDHIGAFEILAFRIIFSMIFMILLLVVGRKQR 60
Query: 79 SLLKDTLKNPKAVGML----VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + ++ ++WG FI+A+ +S Y++ P++S+ L
Sbjct: 61 EAFLRDVNQLFIHPVQLVAIIVAGYVITINWGTFIWAVTNGHVLQSSLGYYINPLVSIVL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A + ++ +L MT+ G P +S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAIIFALIGVLYMTIKIGEFPFVSIMLALSFGVYGLLKKIVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A + YV++ F L G + +FS G KR
Sbjct: 181 SSIAIECIVTAPAGIIYVIYLWQQHHMTFGFNMSSFWLVFSGAVT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS G ++Y P +M + +F+ K+ D + I F + I +++Y + +N +N
Sbjct: 239 IPLSLTGFIQYVGPTIMFILGIFVFKEKFDVHQLITFIFIWIGIILYSISQYMNIKRNPI 298
Query: 314 KK 315
K
Sbjct: 299 AK 300
>gi|168750365|ref|ZP_02775387.1| RarD protein [Escherichia coli O157:H7 str. EC4113]
gi|168753720|ref|ZP_02778727.1| RarD protein [Escherichia coli O157:H7 str. EC4401]
gi|168768104|ref|ZP_02793111.1| RarD protein [Escherichia coli O157:H7 str. EC4486]
gi|168775626|ref|ZP_02800633.1| RarD protein [Escherichia coli O157:H7 str. EC4196]
gi|168780722|ref|ZP_02805729.1| RarD protein [Escherichia coli O157:H7 str. EC4076]
gi|168801113|ref|ZP_02826120.1| RarD protein [Escherichia coli O157:H7 str. EC508]
gi|195938111|ref|ZP_03083493.1| hypothetical protein EscherichcoliO157_17027 [Escherichia coli
O157:H7 str. EC4024]
gi|208806433|ref|ZP_03248770.1| RarD protein [Escherichia coli O157:H7 str. EC4206]
gi|208814479|ref|ZP_03255808.1| RarD protein [Escherichia coli O157:H7 str. EC4045]
gi|208820483|ref|ZP_03260803.1| RarD protein [Escherichia coli O157:H7 str. EC4042]
gi|209397955|ref|YP_002273338.1| RarD protein [Escherichia coli O157:H7 str. EC4115]
gi|254795817|ref|YP_003080654.1| putative chloramphenical resistance permease [Escherichia coli
O157:H7 str. TW14359]
gi|187768899|gb|EDU32743.1| RarD protein [Escherichia coli O157:H7 str. EC4196]
gi|188015468|gb|EDU53590.1| RarD protein [Escherichia coli O157:H7 str. EC4113]
gi|189001423|gb|EDU70409.1| RarD protein [Escherichia coli O157:H7 str. EC4076]
gi|189359217|gb|EDU77636.1| RarD protein [Escherichia coli O157:H7 str. EC4401]
gi|189362596|gb|EDU81015.1| RarD protein [Escherichia coli O157:H7 str. EC4486]
gi|189376662|gb|EDU95078.1| RarD protein [Escherichia coli O157:H7 str. EC508]
gi|208726234|gb|EDZ75835.1| RarD protein [Escherichia coli O157:H7 str. EC4206]
gi|208735756|gb|EDZ84443.1| RarD protein [Escherichia coli O157:H7 str. EC4045]
gi|208740606|gb|EDZ88288.1| RarD protein [Escherichia coli O157:H7 str. EC4042]
gi|209159355|gb|ACI36788.1| RarD protein [Escherichia coli O157:H7 str. EC4115]
gi|209753202|gb|ACI74908.1| hypothetical protein ECs4749 [Escherichia coli]
gi|209753206|gb|ACI74910.1| hypothetical protein ECs4749 [Escherichia coli]
gi|254595217|gb|ACT74578.1| predicted chloramphenical resistance permease [Escherichia coli
O157:H7 str. TW14359]
gi|326344277|gb|EGD68037.1| Protein rarD [Escherichia coli O157:H7 str. 1125]
Length = 295
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPTDEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRK 294
>gi|283471911|emb|CAQ51122.1| RarD protein [Staphylococcus aureus subsp. aureus ST398]
Length = 302
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 81/303 (26%), Positives = 145/303 (47%), Gaps = 7/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G AYILWGI P+Y QF++ + E+++ R+++S+ + F +
Sbjct: 1 MNTEYKKGIFLSLSAYILWGILPIYWQFVDAIGAFEILAFRIIFSVIFMIFILAVGQKQR 60
Query: 79 SLLKDTLK----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + P + +V + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 61 NAFQRDMNQLLAKPIQLLAIVVAGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A L + +L MTL G P++S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAILFAFIGVLYMTLKIGEFPIVSIILALSFGTYGLLKKIVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A L YV++ F L L G + +FS G KR
Sbjct: 181 SSITIECIVTAPAGLIYVIYLWQQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS +G ++Y P +M V +F+ K+P + I F + +V+Y L I K+
Sbjct: 239 IPLSLIGFIQYVGPTIMFVLGIFVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPV 298
Query: 314 KKS 316
K+
Sbjct: 299 AKT 301
>gi|116251303|ref|YP_767141.1| transmembrane transporter protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115255951|emb|CAK07032.1| putative transmembrane transporter protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 307
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 99/288 (34%), Positives = 170/288 (59%), Gaps = 2/288 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P+Y + + +S EVI+HR++WSLP ++ ++
Sbjct: 19 SPRGFAFALTAYLLWGFLPIYMKAVAHISPAEVIAHRIVWSLPLAGIVLIVLGRT-QDIR 77
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L +P+ + M +A+++ V+WG +++A+ + YF+ P+ S+FLG+VFLKE+
Sbjct: 78 AALSSPRMLAMAALTASLITVNWGTYVWAIGAGHSLDAALGYFINPLFSIFLGAVFLKEK 137
Query: 143 LNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A L L++ I+ L GIP ++L +AV+W Y RKT+P+G ++GFF+E+
Sbjct: 138 LQPLQIAAIALAALAVAILALDSGGIPWVALTLAVSWGFYALLRKTLPLGPNQGFFLEVL 197
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L+ PA+ Y+++ F G H + + DT L+G G++ + I++ G K KLST+GI
Sbjct: 198 ILSGPAVLYILYLEFGGQGHLYRTGLADTTLLLGCGVITAVPLMIYANGAKLLKLSTIGI 257
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
M+Y AP ++ + +VF+ +P T R I F ++ + +Y + S
Sbjct: 258 MQYIAPTMIFLIAVFVFHEPFGTARMIAFPLIWAGLFLYSWSMLKGSR 305
>gi|294498765|ref|YP_003562465.1| RarD protein [Bacillus megaterium QM B1551]
gi|294348702|gb|ADE69031.1| RarD protein [Bacillus megaterium QM B1551]
Length = 308
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 79/291 (27%), Positives = 149/291 (51%), Gaps = 4/291 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG-- 77
G ++ AY++WG+ PLY + L +V+ E+++HRV+WS + ++
Sbjct: 3 QDSKRAGIVYTASAYVMWGLFPLYWKLLGEVNANEILAHRVIWSFVFMLLLLLVTKQMSA 62
Query: 78 -LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L +N K +L ++ +++++W +I+A+ TS Y++ P++S+ LG
Sbjct: 63 LKKTLGLLFRNTKQAVILFVASVLISINWFVYIWAVNHNHIIETSLGYYINPLVSILLGI 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V LKE+LN Q + L + +++MT+ G P +SL++A ++ Y +KTI + + G
Sbjct: 123 VVLKEKLNFWQGASVGLAAIGVIVMTVTYGHIPWVSLSLAFSFGLYGLVKKTIQLEAKVG 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
IE ++A A+ Y ++ G F L ++ + LIG G+ + F+ G
Sbjct: 183 LTIETMMVAPIAVIYFIFLLVKGSSSFSLQSLDLSALLIGGGVATAMPLLYFAKGAPLIP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
LS VG ++Y AP + ++ VF+ +P +V I F + V+++L
Sbjct: 243 LSMVGFLQYIAPTMTLLLGVFVYHEPFSSVEMIAFLFIWGGSVMFILSKTK 293
>gi|254511642|ref|ZP_05123709.1| RarD protein [Rhodobacteraceae bacterium KLH11]
gi|221535353|gb|EEE38341.1| RarD protein [Rhodobacteraceae bacterium KLH11]
Length = 301
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 77/289 (26%), Positives = 143/289 (49%), Gaps = 1/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
T G + AY+LWG PLY + + V +E+++HRV+WS+P +V LK
Sbjct: 13 TPKGLVLAVTAYVLWGFLPLYMKAIAHVGAVEIVAHRVIWSVPVAGLLLVLLGRT-GDLK 71
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L+NPK +GM +A +++V+W +++A+ + + Y++ P+ S+ LG+V L+E
Sbjct: 72 AALRNPKMLGMAAITAALISVNWAIYVWAIASGHALDAALGYYINPLFSIALGAVLLREP 131
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LN Q+IA L +L++ +G + + K F+ +
Sbjct: 132 LNRTQLIAIGLAASGVLVLVFQAGSLPWVALALMVSWGFYAFFKRSLPIGPNQGFLLEVL 191
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + V + G+ F DTL L G G++ + I++ G K +LST+GI+
Sbjct: 192 ILLIPALVYVVWLEANGDGHFGAAASDTLLLAGAGIVTAVPLLIYANGAKLVRLSTMGIL 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+Y AP ++ ++++ + + +D R I F ++ +VVY +P +
Sbjct: 252 QYIAPTMIFITAITLFGERVDQARMIAFPLIWAGLVVYSIPMIRQVRSR 300
>gi|51245199|ref|YP_065083.1| integral membrane protein RarD [Desulfotalea psychrophila LSv54]
gi|50876236|emb|CAG36076.1| related to integral membrane protein (RarD) [Desulfotalea
psychrophila LSv54]
Length = 299
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 2/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L A+ +WG P+Y + + V LEV+ HR WSL +
Sbjct: 1 MQRYFGVLAAIAAFAMWGSLPIYWKQVAMVPALEVLCHRTAWSLLVTAIIVFSLGR-WRE 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +K + +L+ SA +LA +W +I+A+ + S YF+ P+I++ G +F
Sbjct: 60 VMAEMKRGGNIKILLSSALLLAANWLLYIWAVNSGYIIEASLGYFINPLINIGCGCLFFG 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL QI+A + +++ +T++ G P +++ +A +++AY K V + FIE
Sbjct: 120 ERLRRGQILALFIASCAVIYLTVYYGRFPWIAITLAFSFAAYAVVHKKTTVSAVNALFIE 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L +PA+ Y+ W ++G F L TLFL+G G+ + F Y +L+T+
Sbjct: 180 TVMLFLPAVAYIAWLQYTGVGSFLLHGRATTLFLVGAGVATTIPLLCFGYAAHNLRLATL 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
GI +Y AP L +V +F+ + R + F ++ +A+++Y+ + K
Sbjct: 240 GIFQYIAPSLSLVIGIFLYGEDFPAQRMVGFCLIWLAILLYMGESFYQRNKQNKA 294
>gi|299821469|ref|ZP_07053357.1| DMT superfamily drug/metabolite transporter RarD [Listeria grayi
DSM 20601]
gi|299817134|gb|EFI84370.1| DMT superfamily drug/metabolite transporter RarD [Listeria grayi
DSM 20601]
Length = 301
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 74/304 (24%), Positives = 156/304 (51%), Gaps = 7/304 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
N ++G + AYILWG+ P+Y + V +E++++R++WS + F +V
Sbjct: 1 MNNTEKTPLIGVICGIIAYILWGVLPIYWKLAANVPSIEILAYRIIWSFVFMVFLVVCLR 60
Query: 76 GGLSLLKDTL---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S+ + + + PK + +A ++ V+W FI+++ + S Y++ P++++
Sbjct: 61 KSRSVFGEAVAVLRKPKTFLAITAAAVLITVNWFIFIFSVNSGHVTEASLGYYINPLVNI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVG 191
L +VFLKERLN + IA + + ++I+T+H G +P +L +AVT+S Y +K +PV
Sbjct: 121 LLATVFLKERLNRSETIAVVAAFIGVVILTIHVGQMPWAALGMAVTFSLYGLIKKFVPVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G +E ++ AL +V++ G F + +G G++ + +F+
Sbjct: 181 TWSGLTLETLIITPFALIFVIFFSKDGFLAFPIETNFIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K + +G ++Y P +M+ V + + D + + F + A++++ +I + K+
Sbjct: 238 KTINYTLLGFLQYIGPTIMLALGVLLYNEKFDMTQLVAFIFIWFALIIFTSSHIILARKS 297
Query: 312 KTKK 315
+ +
Sbjct: 298 RQTR 301
>gi|323141347|ref|ZP_08076239.1| protein RarD [Phascolarctobacterium sp. YIT 12067]
gi|322414173|gb|EFY05000.1| protein RarD [Phascolarctobacterium sp. YIT 12067]
Length = 292
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 69/290 (23%), Positives = 143/290 (49%), Gaps = 4/290 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GL 78
+G + AY+LWG+ P+Y + L+ V +E++++R LWS VF ++ +
Sbjct: 3 NYRLGIFYGLGAYLLWGVLPIYWKLLQHVEAMEILANRFLWSAVFVFLLLLATGKLNIFM 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K K +V +A +++ +WG FI+A+ + TS Y+++P+++V G VF
Sbjct: 63 QETKAIFSTKKTACCMVLAAIMISFNWGIFIWAVEAGRIVETSMGYYISPLMNVLFGVVF 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ERL LQI A + + ++ +H G+P ++L + +T++ Y +K I
Sbjct: 123 LRERLAKLQIAAVSCAAVGIGVIIVHNGGLPWVALTLPLTFAFYGLLKKIIIAQPMTSIL 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +++ A Y+ + + G + ++ L L G G + + +F+ ++ L+
Sbjct: 183 LETLLISPLAAGYLYYLSINEGTVYQSCDMNTLLLLAGAGAVTATPMLLFTACARKLPLN 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
VG ++Y +P + ++ V I +P FG + + +++ +
Sbjct: 243 IVGFLQYISPSISLMIGVLIYGEPFTGTTATAFGCIWAGLALFIWSQIRR 292
>gi|297530213|ref|YP_003671488.1| RarD protein, DMT superfamily transporter [Geobacillus sp. C56-T3]
gi|297253465|gb|ADI26911.1| RarD protein, DMT superfamily transporter [Geobacillus sp. C56-T3]
Length = 309
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 4/299 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGG 77
G L+ +Y+LWG PLY + LE LE+++HR++WS + +
Sbjct: 5 SEEKQGILYTAASYLLWGALPLYWKLLEARPALEILAHRIVWSFVFMAILLAATGQLGAF 64
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + P + +A +++ +W +I+A+ TS Y++ P++SV LG++
Sbjct: 65 RRELRAMRRRPAKARGIAAAAVLISANWFVYIWAVNHHHVVETSLGYYINPLVSVALGTI 124
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L+ERL+ Q A L + MT G P +++++A+T+ Y +K V SS G
Sbjct: 125 VLRERLSVGQWAAVFLAAAGVAAMTAKYGAFPWVAISLALTFGFYGLVKKLASVDSSIGL 184
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E + + Y++W L G G + F+ G KR +
Sbjct: 185 TLETMAVMPLSAVYLLWVYNETPALVKTAEWWQWALLAGAGPATAVPLLYFAKGAKRVSM 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+T+G ++Y +P + ++ VF+ +P F + A++++ + + K K
Sbjct: 245 TTLGFLQYISPTISLLLGVFLFGEPFTKAHFYAFSCIWAALILFSAVQIKQAPGRKKWK 303
>gi|118588101|ref|ZP_01545511.1| rarD protein [Stappia aggregata IAM 12614]
gi|118439723|gb|EAV46354.1| rarD protein [Stappia aggregata IAM 12614]
Length = 307
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 91/304 (29%), Positives = 159/304 (52%), Gaps = 2/304 (0%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA 70
S+ ++ AS G LF AY +WG P Y + E V V+SHR+LWS+ V
Sbjct: 2 SQTVTSTEASTEFRHGLLFGLAAYGMWGFLPAYYKLTETVPADLVVSHRILWSVLFVGLF 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + D + PK + L SAT++AV+W F++A+ S YF+ P++
Sbjct: 62 LYARGR-WQEVVDVFRQPKVLMGLTVSATLIAVNWLTFVWAIAENHVLDISLGYFINPLV 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIM-TLHSGIPLLSLAIAVTWSAYCFARKTIP 189
S+ +G L+E+L Q IA + L++++ L G+P +SL +A +++ Y + RK +P
Sbjct: 121 SILVGLFVLREKLTTWQGIAVGVAALAVVLQAILAGGLPWVSLVLAFSFAGYGYVRKVVP 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
V ++ G F+E VL A Y++ + G + L + P L L+G G++ + FS
Sbjct: 181 VKATPGLFVETIVLFPLAAGYMLLSLSWGDDALVLNDPPVLLALVGTGIVTALPLICFSS 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+R L +G+M+Y AP + + +V+I +P+DT + + FG++ A+ V+ +
Sbjct: 241 AARRLPLFMLGLMQYMAPSMHFLMAVYIWGEPLDTTKLMTFGMIWAALAVFSYDSWRRYR 300
Query: 310 KNKT 313
N+
Sbjct: 301 LNQR 304
>gi|323702731|ref|ZP_08114391.1| RarD protein, DMT superfamily transporter [Desulfotomaculum
nigrificans DSM 574]
gi|323532248|gb|EGB22127.1| RarD protein, DMT superfamily transporter [Desulfotomaculum
nigrificans DSM 574]
Length = 318
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 84/297 (28%), Positives = 158/297 (53%), Gaps = 4/297 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S + S + G +F AY++WG+ P+Y + ++QV ++++HR +WS + +V
Sbjct: 1 MSMKQQSNEQLTGIIFGTAAYLIWGVLPIYWKLMDQVPANQILAHRFVWSFVFMVLVLVV 60
Query: 74 FSGGLSL---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LK PK + +V +A +++V+WG FI+A+ + + TS Y++ P+I
Sbjct: 61 SGNVKGFCMELKQITAQPKTLIGVVIAALLISVNWGVFIWAVNSDRIIETSLGYYINPLI 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
+V LG + LKERL+ Q ++ L I+ +L MTLH G +P ++L +A+T+ Y ++KT+
Sbjct: 121 NVLLGVIVLKERLSFWQTVSFCLAIIGVLNMTLHFGAVPWVALILAITFGLYGLSKKTVK 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
V ++ G +E ++ AL ++ + +G F L + L+G G+ + +F+
Sbjct: 181 VTAATGITLETLIITPFALLFLTYVHRTGAGAFSLSSPTMAGLLMGAGVATAVPLLLFAS 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
G R L VG ++Y AP + + +F+ + V + F + A+ V+ L
Sbjct: 241 GANRLPLYVVGFLQYIAPTISLFIGIFLYHERFTGVHLVSFAFIWAALTVFSLARTR 297
>gi|90411067|ref|ZP_01219080.1| hypothetical membrane protein [Photobacterium profundum 3TCK]
gi|90327913|gb|EAS44234.1| hypothetical membrane protein [Photobacterium profundum 3TCK]
Length = 300
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 1/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + +++LWGI PLY FL Q + E+++ R+++S+P + I+ L
Sbjct: 2 QSHRAGNVLAAFSFVLWGILPLYYHFLPQANTNELLALRIIFSVPVMLLIIMILRQPLPS 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +++ V ++ I+ + W F +AL Q S +F+ P+ ++ G FLK
Sbjct: 62 YSAIINDKRSLVFTVLASLIMCISWYAFTWALTHGQVLAASLGFFINPLFAIAFGVFFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL+ QI A +L I + G P ++L + ++ Y ++K I + IE
Sbjct: 122 ERLSSAQIAAVVLGIAGISYQVWSYGELPWIALIMGSFFALYGLSKKFIKYNALTSVTIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+LA A+ +++W G +I L IG + F+ I R L+ V
Sbjct: 182 SVILAPFAIAFMLWQYLQGTSVALSSDIQTLLLYIGSAPVTLAPLIFFALAINRTSLTMV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+M+Y P L + +VF+ + D V+ I FG + + +++ L + KNK +
Sbjct: 242 GLMQYIEPSLQFLLAVFLFGEIFDEVKLISFGFIWLGLLLCTLEALTRGFKNKHR 296
>gi|26250559|ref|NP_756599.1| protein rarD [Escherichia coli CFT073]
gi|227888595|ref|ZP_04006400.1| DMT superfamily drug/metabolite transporter [Escherichia coli
83972]
gi|300985663|ref|ZP_07177550.1| protein RarD [Escherichia coli MS 45-1]
gi|301047299|ref|ZP_07194385.1| protein RarD [Escherichia coli MS 185-1]
gi|26110989|gb|AAN83173.1|AE016769_288 Protein rarD [Escherichia coli CFT073]
gi|227834434|gb|EEJ44900.1| DMT superfamily drug/metabolite transporter [Escherichia coli
83972]
gi|300300818|gb|EFJ57203.1| protein RarD [Escherichia coli MS 185-1]
gi|300408047|gb|EFJ91585.1| protein RarD [Escherichia coli MS 45-1]
gi|307555945|gb|ADN48720.1| RarD protein [Escherichia coli ABU 83972]
gi|315293203|gb|EFU52555.1| protein RarD [Escherichia coli MS 153-1]
Length = 296
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQHRTSK 296
>gi|146284208|ref|YP_001174361.1| RarD protein [Pseudomonas stutzeri A1501]
gi|145572413|gb|ABP81519.1| RarD protein [Pseudomonas stutzeri A1501]
gi|327482566|gb|AEA85876.1| RarD protein [Pseudomonas stutzeri DSM 4166]
Length = 296
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 142/294 (48%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A+ G L + +WG+ PLY + LEQ LE+++ RV+WS ++ +
Sbjct: 2 ATANLRKGYLLGLATFSIWGMFPLYFKALEQYGALEIVTQRVIWSAVFGSLVLLVWR-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ L +P+ +G+L S+ ++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRELLAHPRRLGVLGISSVLIAANWLIYVWAVNHDRMVEASLGYYINPLVNVLLGMLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ERL LQ +A + + + + L G P +SL +A+++ Y RK PV + G
Sbjct: 121 LRERLRPLQWLAVAMATVGVSLQLLMLGEFPWISLVLALSFGTYGLLRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ W G D L+L+ G + F+ + S
Sbjct: 181 VETWLLLPVALIWLFWFGNGASTEPAFWTSTDALWLMAAGPVTLIPLLGFNAAARHLPYS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y P L+++ +V + +P R + F + + VY L K+
Sbjct: 241 TLGFLQYLTPTLLLILAVQLFGEPFPVDRQLAFFCIWAGLAVYSLDAWRVMRKS 294
>gi|228998317|ref|ZP_04157912.1| chloramphenicol-sensitive RarD protein [Bacillus mycoides Rock3-17]
gi|228761469|gb|EEM10420.1| chloramphenicol-sensitive RarD protein [Bacillus mycoides Rock3-17]
Length = 313
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 71/303 (23%), Positives = 149/303 (49%), Gaps = 4/303 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---V 72
E+ G L+ AY++WG+ P+Y +++ +V E+++HR++W+ + +
Sbjct: 1 MESQKALQKQGILYAAGAYMMWGVLPVYWKWVGEVPAEEILAHRIVWAFVFMLLILGVSR 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S L K PK + L ++ +++ +W +I+A+ S Y++ P++S+
Sbjct: 61 RLGQFQSELVSLFKRPKLLISLTIASVLISGNWFVYIWAVNQNHIIEASLGYYINPLVSI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVG 191
LG+V LKE+LN Q +A L + ++I+ G IP ++L++A T+ Y +K +
Sbjct: 121 LLGTVVLKEKLNFWQYVAVGLAGIGVIILAFRYGSIPWIALSLAFTFGLYGLTKKLLNYD 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G +E ++ A Y+V G G F + TL L+G G++ + F+ G
Sbjct: 181 AMIGLTMETMIVTPLAFIYLVMIGEHGFGSFGSISFTSTLILMGAGIVTALPLFYFAKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ L +G ++Y +P + ++ VF+ + + F + +A++++ + +
Sbjct: 241 QLIPLYMIGFLQYISPTINLILGVFVFHEHFTSAHMTAFFFIWVALLIFSIAKTKFLLRK 300
Query: 312 KTK 314
+ K
Sbjct: 301 QPK 303
>gi|222148103|ref|YP_002549060.1| hypothetical protein Avi_1476 [Agrobacterium vitis S4]
gi|221735091|gb|ACM36054.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 307
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 95/297 (31%), Positives = 172/297 (57%), Gaps = 6/297 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++ G LF AY+LWG PLY + + + +EVI+HRVLWS+P ++
Sbjct: 9 TENRDSLRGFLFALSAYLLWGFLPLYMKAVAHIPPMEVIAHRVLWSIPVAGLVLLVLRRT 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + GM +A +++V+WG +++A+ T+ YF+ P+ S+ LG+V
Sbjct: 69 DDLKRALHNPKMI-GMAAITACLISVNWGIYVWAIGAGHALDTALGYFINPLFSILLGAV 127
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
LKE+L Q+ A L++++++I+T+ +G PL++L++ +W Y F RKT+P+G ++GF
Sbjct: 128 LLKEKLKPAQMAALALVVVAVVILTVDAGRLPLIALSLTFSWGFYAFFRKTLPIGPNQGF 187
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHF----FLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+E+ +LA AL Y+++ G +G HF +T L GL+ + +++ G K
Sbjct: 188 LLEVLLLAPFALAYLIYLGVTGQSHFLGAADASMFNNTTLLASSGLVTAVPLILYANGAK 247
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+LST+GIM+Y AP ++ + +VF+ ++ T + I F ++ +A+V+Y LP +
Sbjct: 248 LLRLSTIGIMQYIAPTMIFLIAVFLFREEFSTAKAIAFPLIWVALVIYTLPMLKRRR 304
>gi|68535843|ref|YP_250548.1| putative RarD protein [Corynebacterium jeikeium K411]
gi|68263442|emb|CAI36930.1| putative RarD protein [Corynebacterium jeikeium K411]
Length = 291
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 65/292 (22%), Positives = 147/292 (50%), Gaps = 6/292 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ Y++WG+ P + L+ + +E+++HR +W+L + + G L T +
Sbjct: 1 MIWGLLCYLMWGLFPAFFPLLQPATPMEILAHRFVWTLVFMLLLLAALRGFKQLRVITAR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V +A +++V+WG +IYA+ + YFV P++SV LG + L E+L L
Sbjct: 61 QWWIVAA---AALLISVNWGLYIYAVNNNHVADAALGYFVNPLVSVLLGVIVLGEKLRRL 117
Query: 147 QIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q+++ + ++++++T+ P++SL++A ++ Y +K + + + E VLA
Sbjct: 118 QMVSVGIATIAVVVLTVALGSPPIISLSLAFSFGFYGLVKKQVRLTPIQSLTAETLVLAP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L Y+ + G + L+ G++ + F+ + L+++G+++Y
Sbjct: 178 IGLIYLGFLQSQGTNTYVQLGAGHAALLMLAGVVTALPLLCFARAAQEMSLTSLGMVQYI 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP--TVINSGKNKTKK 315
P++ ++ +VF+ + I+ R + F ++ IA++V+++ + KK
Sbjct: 238 TPVIQMLWAVFVNNEHIEPARWVGFVLIWIAVIVFIVDLVGHRPPRVRRVKK 289
>gi|148559889|ref|YP_001258662.1| RarD protein [Brucella ovis ATCC 25840]
gi|148371146|gb|ABQ61125.1| RarD protein [Brucella ovis ATCC 25840]
Length = 290
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 78/287 (27%), Positives = 156/287 (54%), Gaps = 2/287 (0%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
Y LWG P Y + L V +EV+SHRV+WS+P ++ +L + P
Sbjct: 1 MALGDYGLWGALPFYLKALSHVPAMEVVSHRVIWSVPVALVLLILLGQFRGILSAV-RQP 59
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + M +A ++ ++W +++A+ Q + Y++ P+ +V LG +FL ERL Q
Sbjct: 60 RMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLTKTQY 119
Query: 149 IAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A L ++++++T++ G+P +SLA+ +++ Y F RK++P+ +GF +E+ +L IPA
Sbjct: 120 VAVGLAFVAVVLLTINAGGLPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLILCIPA 179
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L YV W +G +HF G + + L+ G + +++ G K + +T+G+M+Y P
Sbjct: 180 LAYVAWLAATGQDHFVAGPVSNITLLLLAGPFTAIPLILYAGGAKLLRYATLGLMQYMTP 239
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ ++FI +P T + F ++ + +Y ++ +++ +
Sbjct: 240 TMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLSQHRRDRAQ 286
>gi|126729467|ref|ZP_01745281.1| RarD [Sagittula stellata E-37]
gi|126710457|gb|EBA09509.1| RarD [Sagittula stellata E-37]
Length = 294
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 68/285 (23%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A +WG++PLY + L V LE+++HR +WSL VF I+ L L+ L N +
Sbjct: 1 MIGACSIWGLSPLYYKLLVDVPPLELLAHRTVWSLV-VFAGILAMQKRLGRLRVALGNMR 59
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+V ++ F+A +++ +W FI+++ + ++ Y++ P+++V LG++ LKERL LQ +
Sbjct: 60 SVAIVAFAAFMISSNWFLFIFSVQSGHVVESALGYYMFPLVAVLLGTLVLKERLAPLQWL 119
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
A L +++ +TL G+ + K + ++ P
Sbjct: 120 AVGLATIAVTQLTLGLGVAPWISLVIAMTFGLYGLVKKRLTVGAMTSVTAEVLVLSPVGL 179
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + GG F ++ + L G+L + +FS +R ++T+G+++Y P L
Sbjct: 180 GWLAHVHWGGGGVFGHDVGLSALLAFSGVLTALPLILFSAAAQRVNMATLGLLQYMNPTL 239
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+V + +P++T + + FG++ +A+ +Y ++ +
Sbjct: 240 QFFCAVVLFGEPLNTFQLVAFGLIWLALAIYSFQSLAQERARRRS 284
>gi|85707204|ref|ZP_01038290.1| RarD [Roseovarius sp. 217]
gi|85668258|gb|EAQ23133.1| RarD [Roseovarius sp. 217]
Length = 298
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 1/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L + +WG++ +Y + L+ + +E+++HR LWS ++ +S+
Sbjct: 2 RDATKGILAMVATCTVWGLSGIYYKLLDHIPPIEILAHRTLWSCIFFSLVLLMQGR-ISV 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L L ++V ++ F+A +++ +W FI ++ + S Y++ P+++V LG++ +
Sbjct: 61 LGQALGARRSVFLIGFAALMISTNWFVFITSIQIGKAVEASLGYYIFPLVAVLLGAIAFR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL Q+ A L +++ +T+ G+P + + K
Sbjct: 121 ERLGKAQLFAVALAATAVITLTIGLGVPPWIALVLASSFGLYGLVKKGLSIGPVVSVTAE 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L P V+W S G F N D+L L G+L + +FSY KR L+TVG
Sbjct: 181 VMLLSPIALGVLWWFHSDGHGAFGTNWHDSLLLAFSGILTATPLVMFSYATKRITLATVG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+++Y P L + + + ++ I FG++ A+ +Y ++ +
Sbjct: 241 LVQYLNPSLQFLVATVLFREVFSFWHAIAFGMIWTALAIYTTASLRQDRAARRA 294
>gi|118472770|ref|YP_887491.1| RarD protein [Mycobacterium smegmatis str. MC2 155]
gi|118174057|gb|ABK74953.1| RarD protein [Mycobacterium smegmatis str. MC2 155]
Length = 304
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/292 (22%), Positives = 140/292 (47%), Gaps = 4/292 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G L+ AYI WG+ P + L LEV++HR++WS + + +
Sbjct: 1 MSGSNRTGVLYGAGAYIWWGLCPGFFLLLLPAGPLEVVAHRIVWSTVFLMLVLAFARRLG 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + +L+ + ++ +++++WG +I+A+ + + YF+ P++SV LG +
Sbjct: 61 DLRRLSLRTWLQLLA---ASALISINWGTYIFAVTSGHVVDAALGYFINPLVSVALGVII 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-LAIAVTWSAYCFARKTIPVGSSEGFF 197
+ER+N Q ++ L ++++ ++T+ G P + +AV++ Y +K +
Sbjct: 118 FRERINRWQAVSLALAVIAVAVLTVEVGEPPYIAVVLAVSFGVYGLVKKVVQADPRVSVA 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E + A YV+ G HF + + ++ G++ + +F+ +R +
Sbjct: 178 VETLLALPVAGGYVIVLEVLGRGHFIAESPWHPVLMVLSGVVTAVPLLLFAAAAQRLTMV 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+G++ Y P L ++ VFI +P+ R I F ++ A+ V + T+ N
Sbjct: 238 MMGLLFYLNPALQMLWGVFIGHEPMPLGRWIGFALIWTALAVMTIGTLRNRR 289
>gi|237809715|ref|YP_002894155.1| RarD protein, DMT superfamily transporter [Tolumonas auensis DSM
9187]
gi|237501976|gb|ACQ94569.1| RarD protein, DMT superfamily transporter [Tolumonas auensis DSM
9187]
Length = 292
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 155/292 (53%), Gaps = 2/292 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L+ A+++WGI PLY + + V E+++HR++WS + + + G +
Sbjct: 2 KSSTKGMLYALTAFLIWGIAPLYFKHIGFVPAEEIVTHRIIWSCLFLILLVWWTKTGRQV 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++P+ + +L +A ++A +W FI+A+ +S YF+ P++++ LG +FL
Sbjct: 62 VTVF-RHPRYLALLTATALLIAGNWLLFIWAINHDHMLESSLGYFINPLLNILLGMLFLG 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q +A L + +L+ + G P ++L++A +++ Y RK I V S G +E
Sbjct: 121 ERLRFWQWLAVALAVSGVLLQIVTLGVFPWIALSLASSFAVYGLIRKKIAVDSLTGLLVE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L A++Y+ W+ S + L+LI G++ + F+ G KR +LST+
Sbjct: 181 TVMLTPVAVWYLFWHADSATSQLTQNALSLNLWLIAAGIITTVPLLCFTAGAKRLRLSTI 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G +Y P LM + ++ + +PI + + F ++ A+V++ + + +N
Sbjct: 241 GFFQYLGPSLMFIFAITLYHEPIVWQKWLTFALIWSALVIFSWEALRFNRQN 292
>gi|326329625|ref|ZP_08195947.1| protein RarD [Nocardioidaceae bacterium Broad-1]
gi|325952621|gb|EGD44639.1| protein RarD [Nocardioidaceae bacterium Broad-1]
Length = 305
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 73/291 (25%), Positives = 143/291 (49%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F AY++WG PLY LE E++ HR++WSL ++ +
Sbjct: 2 NEQRRGVMFGAAAYVMWGAFPLYFPLLEPAGAWEILGHRIVWSLVVAGALVLIVGR-RAQ 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L++ + +G+L +A +++++W +I+ + + TS YF P++++ +G + L+
Sbjct: 61 VAAILRDRRKLGLLTAAAAVISLNWVTYIWGVNNGRIVETSLGYFTNPLVTMLMGVIILR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ LQ +A + ++++++T+ G P ++L +A ++ Y +K+ VG E +E
Sbjct: 121 ERMRKLQWVALGIAFVAVIVLTIDYGRLPWVALLLAFSFGTYGLLKKSAGVGPFESLAVE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V AL +V +G + L LI G++ F R + T+
Sbjct: 181 TAVTTPFALALIVALQATGNGTLVGHGVLHVLLLISLGVITVVPLACFGAAAIRVPMVTI 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G+++Y AP+L VFI + + R F IV +A++++ V + K
Sbjct: 241 GLLQYLAPILQFAVGVFIAHEAMPPGRWAGFAIVWVALIIFSAEAVHHRSK 291
>gi|300705067|ref|YP_003746670.1| permease [Ralstonia solanacearum CFBP2957]
gi|299072731|emb|CBJ44084.1| putative permease, rarD-like [Ralstonia solanacearum CFBP2957]
Length = 281
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 2/277 (0%)
Query: 36 LWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
+WG+ PLY + L+ V+ LE++SHRV+WSL + + + L + P+ V +
Sbjct: 1 MWGLFPLYFKLLKSVTPLEILSHRVIWSLAVMVGVL-AVKRHWAWLWALRREPRVVARHL 59
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
S +LA++W +I+A+ S YF+ P++ V L + L ERL Q ++ L
Sbjct: 60 ASTAMLALNWCTYIWAVNHDHVIDASLGYFINPLVVVMLALLVLGERLRPGQWLSVALAA 119
Query: 156 LSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ +T +G P ++LA+A T+ Y RKT P+G+ EG +E +L L Y+ W
Sbjct: 120 AGVAWLTWQAGHLPWIALALAATFGLYGLLRKTSPLGALEGLTLETLLLFPATLAYLGWL 179
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
F L L+ G L + +F G +R LS +G+++Y +P L ++
Sbjct: 180 AAQQQNVFLAAPPGIRLLLVLAGPLTAVPLLLFGAGARRIPLSLLGLLQYVSPTLQLLLG 239
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V++ +P + + ++ + VY + +
Sbjct: 240 VWLYNEPFGGPQVFGYVLIWCGLAVYSAEGWMRLRRR 276
>gi|157373845|ref|YP_001472445.1| transporter DMT superfamily protein [Shewanella sediminis HAW-EB3]
gi|157316219|gb|ABV35317.1| RarD protein, DMT superfamily transporter [Shewanella sediminis
HAW-EB3]
Length = 309
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 135/298 (45%), Gaps = 1/298 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
S + ++ G ++ILWG+ PLY Q+L + E+++ R+L S+P + +
Sbjct: 4 SDASKIRSSVQGNSLAAFSFILWGLMPLYYQYLPGADINEMLAFRILCSVPFMALVFLLL 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ +K + + +++ + + I+ V W F +A+ Q S +F+ P+ ++ L
Sbjct: 64 RRKMPSIKLVMSDKRSLALCGLATLIMCVSWYSFTWAITHGQVLAASLGFFINPLFAIGL 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSS 193
G VFLK++L Q A +L + M G P L+L++ ++ Y +K I S
Sbjct: 124 GVVFLKDKLTSAQKAAVMLGTAGIGYMVFSYGELPWLALSMGGFFALYGLCKKFIRFDSL 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+E +L A Y++W S G + L +G + F+ I R
Sbjct: 184 TSVTVEAMLLMPFAALYIIWLWVSDQSVALGGELSQLLLYMGTAPVTLLPLIFFALAISR 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
LS +G+M+Y P + + +V + + D V+ + F ++ +++ L + +
Sbjct: 244 TSLSMIGLMQYIEPSMHFLLAVLLFNEHFDQVKAVSFALIWTGLLLCSLEALPALKQR 301
>gi|229005800|ref|ZP_04163498.1| chloramphenicol-sensitive RarD protein [Bacillus mycoides Rock1-4]
gi|228755476|gb|EEM04823.1| chloramphenicol-sensitive RarD protein [Bacillus mycoides Rock1-4]
Length = 313
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 71/303 (23%), Positives = 149/303 (49%), Gaps = 4/303 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---V 72
E+ G L+ AY++WG+ P+Y +++ +V E+++HR++W+ + +
Sbjct: 1 MESQKALQKQGILYAAGAYMMWGVLPVYWKWVGEVPAEEILAHRIVWAFVFMLLILGVSR 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S L K PK + L ++ +++ +W +I+A+ S Y++ P++S+
Sbjct: 61 RLGQFQSELVSLFKRPKLLISLTIASVLISGNWFVYIWAVNQNHIIEASIGYYINPLVSI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVG 191
LG+V LKE+LN Q +A L + ++I+ G IP ++L++A T+ Y +K +
Sbjct: 121 LLGTVVLKEKLNFWQYVAVGLAGIGVIILAFRYGSIPWIALSLAFTFGLYGLTKKLLNYD 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G +E ++ A Y+V G G F + TL L+G G++ + F+ G
Sbjct: 181 AMIGLTMETMIVTPLAFIYLVMIGEHGFGSFGSISFTSTLILMGAGIVTALPLFYFAKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ L +G ++Y +P + ++ VF+ + + F + +A++++ + +
Sbjct: 241 QLIPLYMIGFLQYISPTINLILGVFVFHEHFTSAHMTAFFFIWVALLIFSIAKTKFLLRK 300
Query: 312 KTK 314
+ K
Sbjct: 301 QPK 303
>gi|172056826|ref|YP_001813286.1| transporter DMT superfamily protein [Exiguobacterium sibiricum
255-15]
gi|171989347|gb|ACB60269.1| RarD protein, DMT superfamily transporter [Exiguobacterium
sibiricum 255-15]
Length = 294
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 3/290 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + AY++WG+ P+Y + L VS E+++HR++WS ++ L L
Sbjct: 5 GFIATLAAYVIWGLLPIYWKLLATVSSEEILAHRIVWSFIF-LLLLLSLQKALPKFTGAL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
KNP + + I++++W +I+A+ S Y++ P++S+ G F +E+L+
Sbjct: 64 KNPFTRRLFFLNGLIISMNWFIYIWAVNHNFIVEASLGYYINPIVSIIFGVFFFREKLSR 123
Query: 146 LQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ +A LL + +LI+T+ G P +SLA+A ++ Y +K P+ S+ IE
Sbjct: 124 IEWLAILLATIGVLILTIGYGKFPWISLALAFSFGFYGVVKKQRPLESTVSLTIETLAPL 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL ++ + G SG E F + + + G +R + VG +++
Sbjct: 184 PIALLFLGYMGVSGQETFTSSPFVMIGLFLTGIITAVPLLLFGF-GAQRIPFTVVGFLQF 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
AP L + V + +P I F + A +V+ L ++ K K
Sbjct: 243 VAPTLSLAIGVLLYNEPFTRTHLIAFTFIWSAALVFTLNGLLIRKKQLRK 292
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 45/138 (32%)
Query: 165 SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL 224
SG A + + + V S E + I L + L
Sbjct: 4 SGFIATLAAYVIWGLLPIYWKLLATVSSEEILAHRIVWSFIFLLLLLSLQKALPKFTGAL 63
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
N GL+ S + I+ + + + + Y P++ I+ VF ++ +
Sbjct: 64 KNPFTRRLFFLNGLIISMNWFIYIWAVNHNFIVEASLGYYINPIVSIIFGVFFFREKLSR 123
Query: 285 VRTIVFGIVVIAMVVYLL 302
+ + + I +++ +
Sbjct: 124 IEWLAILLATIGVLILTI 141
>gi|194364027|ref|YP_002026637.1| RarD protein, DMT superfamily transporter [Stenotrophomonas
maltophilia R551-3]
gi|194346831|gb|ACF49954.1| RarD protein, DMT superfamily transporter [Stenotrophomonas
maltophilia R551-3]
Length = 298
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 85/294 (28%), Positives = 150/294 (51%), Gaps = 3/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L +++WG+ P+Y L +V ++I+HR++WS V ++ S L
Sbjct: 6 KEQRRGLLVTASTFVIWGLVPVYWHLLNEVPSFQIIAHRIIWSTVMVLGWLLLSSK-LGW 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P+A+ +L+ S+ +A +WG +I+A+ TS YF+ P+++V LG + LK
Sbjct: 65 WQKIAAQPRALSILLVSSLTIAFNWGLYIWAINAGHVIETSLGYFINPLVNVLLGVLVLK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ +A + + + +T+ +G P ++L +A ++ Y RK + V G +E
Sbjct: 125 ERLRRLQWVAVAMAAIGVAWLTIDAGTPPWIALGLACSFGLYGLLRKLVSVDPVAGLGVE 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGN-IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L +PAL + +W G FF G + L LI G + + F+YG+KR LS
Sbjct: 185 SLYLFLPALAFAIWAENGHGGAFFHGWGWRNDLLLIFGGAITAVPLIGFAYGVKRIPLSL 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
VGI++Y AP L ++ VF + DT + I F + +++++ + +
Sbjct: 245 VGILQYIAPSLQLLLGVFFFHEAFDTAKAIGFAAIWAGLILFVGDNIRTMRAKR 298
>gi|88855857|ref|ZP_01130520.1| hypothetical protein A20C1_07151 [marine actinobacterium PHSC20C1]
gi|88815181|gb|EAR25040.1| hypothetical protein A20C1_07151 [marine actinobacterium PHSC20C1]
Length = 314
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/303 (21%), Positives = 132/303 (43%), Gaps = 4/303 (1%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + + G F AY+LWG P+ L++ +E+++ R++ SL ++
Sbjct: 2 TTTTQATDRVSPSGLGFAVSAYVLWGAMPIVFFSLKESGAIEIVAWRIVLSLVFCAALLL 61
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G + +L +++ K L + ++ V+W ++YA L S YF P+++V
Sbjct: 62 VTRGYVRVL-AIIRDRKTFWSLGLAGALVVVNWLIYVYASLNGHIVEASLGYFTNPIVTV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIP 189
LG V L+ERL LQ IA + +++L++ + G
Sbjct: 121 LLGVVILRERLRPLQWIALGISAVAVLVLAIGYGSFPWIALGLAFSFGLYGLVKKSVGPK 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ G +E L A+ ++ +G + T+ + G + + +F+
Sbjct: 181 ADALGGLAVETAFLTPIAIVVLLVLSANGVLSAGTVSAGHTVLTLCLGAITAIPLILFAA 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+R L+ +G+ +Y AP+L +V VFI ++ + R + F IV +A+ + +S
Sbjct: 241 AARRLPLTYMGLAQYLAPILQLVVGVFIFREAMPPERWLGFAIVWVALAILTFDLFRHSS 300
Query: 310 KNK 312
+ +
Sbjct: 301 RTR 303
>gi|46201967|ref|ZP_00054014.2| COG2962: Predicted permeases [Magnetospirillum magnetotacticum
MS-1]
Length = 291
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 3/293 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G F Y WG P++ + L + EV+++RV+WSL V + +
Sbjct: 1 MTAEHRRGVFFALACYGTWGFFPVFWKLLSAIPPAEVLAYRVVWSLLAVAVMLSWTGR-W 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + L + + + +L S ++++W FI + S YF+ P+++V LG +
Sbjct: 60 AEVLVLLASRRRLAVLAASTLCISINWLIFISVVSEGNVLEASMGYFLNPLVNVALGVII 119
Query: 139 LKERLNHLQIIAALLIILS-LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL LQ +A L + + + + P +L +A T+ Y RK +PV G
Sbjct: 120 LKERLRPLQWVAVGLALAGIVELAVVTGTPPWSALCLAGTFGIYGLLRKRLPVSPLTGLA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E ++ AL Y+ W + G G L+ G + + F+ R + +
Sbjct: 180 VETGLMFPVALAYLAWR-LAEGAPLLGGTPALATALVASGPVTALPLLWFAAAAGRLRYA 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+G +Y AP + +V + + I F + A+ +YL ++ S +
Sbjct: 239 TLGFFQYLAPTGHFLLAVLVYGESPGPAHMITFACIWAAIGLYLADSLKPSAR 291
>gi|13476476|ref|NP_108046.1| rarD protein, chloamphenicol sensitive [Mesorhizobium loti
MAFF303099]
gi|14027237|dbj|BAB54191.1| RarD protein, chloamphenicol sensitive [Mesorhizobium loti
MAFF303099]
Length = 310
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 95/293 (32%), Positives = 177/293 (60%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G L AY+LWG+ P Y + + + + EVI+HR++WS+P +V+
Sbjct: 10 AESKGRRGFLLALGAYLLWGLLPFYMKAVAHLPLAEVIAHRIVWSVPIAAAVLVWAGRT- 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K +++P+ + M +A +++V+WG +++A+ + T+ Y++ P++SV +G++
Sbjct: 69 ADFKAAIRSPRTIAMAALTAALISVNWGIYVWAIAVDRTVETALGYYINPLVSVVVGALL 128
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL+ LQI A +L +++ ++T+ G P +SLA+A +++AY F RKT+P+G S+GF
Sbjct: 129 LGERLDRLQIAAVVLATVAVTVLTIEGGKLPWVSLALAFSFAAYGFFRKTLPIGPSQGFL 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E+ +L++PAL +V+ +G +H DT LIG G + S +F++G K +LS
Sbjct: 189 LEVLLLSVPALGCIVYLIATGQDHIVSSTGTDTALLIGCGPVTSVPLLLFAFGAKLLRLS 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+GIM+Y AP ++ + +V I +P T + I F ++ A+ +Y ++ + +
Sbjct: 249 TIGIMQYIAPTMVFLIAVLIFDEPFGTAQAIAFVLIWTALAMYSWSMLVTARR 301
>gi|154686357|ref|YP_001421518.1| YojE [Bacillus amyloliquefaciens FZB42]
gi|154352208|gb|ABS74287.1| YojE [Bacillus amyloliquefaciens FZB42]
Length = 298
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/296 (21%), Positives = 134/296 (45%), Gaps = 3/296 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ C++ +WG+ P+Y + LEQ+ L++++HR+LWS + + +
Sbjct: 4 NNARKGIIYTACSFAMWGLFPVYWKLLEQIPALDILAHRILWSFVFMCVLLTVLKKWKTG 63
Query: 81 LKDTLKNPKAVGM--LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ G+ L F++ +++V+W +I+A+ S Y++ P++SV LG +F
Sbjct: 64 WRELRLLKSEGGLLALFFASVLISVNWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILF 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE+LN +Q A + +++I G + +A+ + +S + S +
Sbjct: 124 LKEKLNKMQTAAVSIAGAAVIISAFQYG-AVPYIALLLAFSFGLYGLCKKRTRMSSTIGL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L I + + G L G+ + +F+ G KR L
Sbjct: 183 TLETLLITPAALIYLGYTADGSTSGSLGAGTWALLFFAGVFTALPLLLFAEGAKRLPLYQ 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
VGI++Y AP + ++ VF+ +P + F + A++++ + K++
Sbjct: 243 VGILQYIAPTITLMLGVFVYHEPFSGQKAFTFICIWAALLLFTFSQIKWKRPIKSR 298
>gi|229490339|ref|ZP_04384180.1| RarD protein [Rhodococcus erythropolis SK121]
gi|229322629|gb|EEN88409.1| RarD protein [Rhodococcus erythropolis SK121]
Length = 312
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 73/292 (25%), Positives = 150/292 (51%), Gaps = 4/292 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
E A + G + A++LWG P + L+ +E+++HRV+W+L + + +
Sbjct: 5 ERARSGSSSGIFYGVAAFLLWGTFPAFFGLLDFADPVEILAHRVVWTLLLMLIVLAFAGR 64
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
SL + + ++ ++ +AV+WG +IYA+++ + + YF+ P+++V LG
Sbjct: 65 LGSLRGISARTWL---LVTAASAAIAVNWGTYIYAVVSGRVVEAALGYFINPLVTVLLGV 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V +ERL QI A +L +++++T+ G P+++L +A +++ Y +K +P+
Sbjct: 122 VIFRERLRRAQIAALVLAATAVVVITVDFGKPPIVALLLAGSFATYGLVKKVVPLDPRTS 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E V A A+ Y+V+ G +G F +L L+ G + + +F +R
Sbjct: 182 LTAEGVVAAPFAVGYLVFLGLTGAGAFISSGTGHSLLLLAAGPVTALPLLLFGVAAQRVP 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
L+T+G+++Y P L + V ++ + + R I F ++ A+V++ T +
Sbjct: 242 LATMGMLQYLTPALQMAWGVAVMHEDMPASRWIGFVLIWAALVIFTTDTFVA 293
>gi|229916337|ref|YP_002884983.1| RarD protein, DMT superfamily transporter [Exiguobacterium sp.
AT1b]
gi|229467766|gb|ACQ69538.1| RarD protein, DMT superfamily transporter [Exiguobacterium sp.
AT1b]
Length = 292
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 127/289 (43%), Gaps = 1/289 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G AY++WG+ P+Y +FL++V ++++HR++WS + + ++
Sbjct: 3 KGVWTTIGAYVMWGVLPIYWKFLQEVPSGQILAHRIIWSFLFILLVL-RWTNQWKEFGYA 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L++ + + I++ +W +I+A+ S Y++ P++S+ LG + +E LN
Sbjct: 62 LRHRATRNAFMLNGFIVSANWFVYIWAVNHGYIIEASLGYYINPLVSMVLGVLVFRESLN 121
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+Q +A + + +L++TL G + + + K +S +
Sbjct: 122 RVQWMAVGIASIGVLVLTLGYGTFPWISFVLASTFGFYGMVKKRRPLASTVSLGIETLAV 181
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+P + N + + + L+G G++ + +F YG + + VG +++
Sbjct: 182 VPVALLFLGNQVVTDNIAYNMSPVIWIALLGTGVVTALPLLLFGYGAQHIPFTLVGFLQF 241
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
AP L ++ V + +P F + +A+ + + + + K +
Sbjct: 242 IAPTLSLIIGVVMYHEPFTAYHVFAFTCIWLAIFFFSWNSWVVARKRRQ 290
>gi|126650696|ref|ZP_01722912.1| possible chloramphenicol-sensitive rarD protein [Bacillus sp.
B14905]
gi|126592361|gb|EAZ86379.1| possible chloramphenicol-sensitive rarD protein [Bacillus sp.
B14905]
Length = 305
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 153/296 (51%), Gaps = 4/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A G L F AY WG PLY + LE V +E++ RV+WS A++ F
Sbjct: 2 AMSNEKKGVLAAFFAYAFWGAFPLYWKLLEHVPSMEILLSRVIWSFVFTVLAVIVFRMRK 61
Query: 79 ---SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ LK + K L ++ +++++W +I+A+ TS Y++ P+ISV G
Sbjct: 62 DLIADLKYLWSHQKHFWQLAGASFVISMNWYLYIWAVTHNHLIETSLGYYINPLISVIFG 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+F KE L+ Q +A + ++++I+T++ G +P ++L IA++++ Y +K I + ++
Sbjct: 122 VIFFKESLSRAQWVATGIAFMAVIILTINYGSVPWVALLIALSFAIYGVLKKKITLDATR 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G IE ++ AL Y V+ + F ++ + +I GL+ + +F+ G +
Sbjct: 182 GLAIETLLILPFALGYYVYLFTTHQASFLHVDVKTDILMIFSGLVTAVPLILFAKGAQNI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L +G ++Y +P ++++ + + K+P + + F I+ A++++ +I + K
Sbjct: 242 PLYLLGFIQYVSPTIVLILGIVLYKEPFSQIELLAFSIIWGALLLFSGSKIIETRK 297
>gi|238919202|ref|YP_002932717.1| hypothetical protein NT01EI_1285 [Edwardsiella ictaluri 93-146]
gi|238868771|gb|ACR68482.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 293
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 2/288 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L ++ILWGITPL+ + L + E+++ R+ WS+P + + F + ++
Sbjct: 4 RNGPLLAVLSFILWGITPLFYKLLNDANAFELLAQRLFWSVPLLLALRLLFR-HRTSWRE 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ +++ + I+++ W FIYAL S YF P+ ++ LG +FL +RL
Sbjct: 63 AWQDKRSLYCCLLGGAIMSISWTTFIYALTHNLVLDASLGYFTNPLFAISLGVIFLHDRL 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q IA LL I+ L + G P+L+L + +T++ Y RK I +E
Sbjct: 123 TRFQRIAVLLAIIGLTYQIILLGRVPVLALVMGITFAFYGLVRKYIRYDIMTSMTLETLW 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ AL +W G H ++ + I + +F+ IKR L+ VG+
Sbjct: 183 MLPLALGITLWLQIGGDSHLGNLSLAEYSLYILTAPVTYAPLLLFAAAIKRTSLTVVGLA 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+Y P L + +V +PI+ + I F ++ + + + + N +
Sbjct: 243 QYVEPSLQFLLAVLAFGEPINLPKMISFSLIWLGLALCIYELFRNPHR 290
>gi|299536895|ref|ZP_07050202.1| protein rarD [Lysinibacillus fusiformis ZC1]
gi|298727719|gb|EFI68287.1| protein rarD [Lysinibacillus fusiformis ZC1]
Length = 302
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 74/294 (25%), Positives = 152/294 (51%), Gaps = 4/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL-- 78
G L F AY WG PLY + LE V +E++ RV+WS A++ F
Sbjct: 2 SNEKKGVLAAFFAYAFWGAFPLYWKLLEHVPSMEILLSRVIWSFVFTVLAVIVFRMRQDL 61
Query: 79 -SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ LK + K L ++ +++++W +I+A+ TS Y++ P++SV G +
Sbjct: 62 VADLKYLWSHQKHFWQLAGASFVISMNWYLYIWAVTHNHLIETSLGYYINPLLSVIFGVI 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
F KE L+ Q +A + ++++I+T++ G +P ++L IA++++ Y +K I + ++ G
Sbjct: 122 FFKESLSRAQWVATGIAFIAVIILTINYGSVPWVALLIALSFAIYGVLKKKITLDATRGL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE ++ AL Y V+ + F ++ + +I GL+ + +F+ G + L
Sbjct: 182 AIETLLILPFALGYYVYLFATHQASFLHVDVKTDILMIFSGLVTAVPLILFAKGAQNIPL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+G ++Y +P ++++ + + K+P + + F I+ A++++ +I + K
Sbjct: 242 YLLGFIQYVSPTIVLILGIVLYKEPFSQIELLAFSIIWAALLLFSGSKIIETRK 295
>gi|297585083|ref|YP_003700863.1| RarD protein, DMT superfamily transporter [Bacillus
selenitireducens MLS10]
gi|297143540|gb|ADI00298.1| RarD protein, DMT superfamily transporter [Bacillus
selenitireducens MLS10]
Length = 309
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 6/296 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSL 80
G + AY+LWG P+Y + ++ + E+++HR++WS + V L
Sbjct: 8 KKGVMAGIGAYLLWGFLPIYWKTVDHIPATEILAHRIVWSFFFLLILFVATRKLPYLLED 67
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +PK + ++ S+ +++ +W FI+A+ + S Y++ P+I+V LG +F K
Sbjct: 68 LRYLKTHPKIIVNILLSSILISANWILFIWAVANERIVEVSLGYYINPLINVILGVIFFK 127
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ Q A L + +LIMTL G P ++L +A ++ Y +K VGS G IE
Sbjct: 128 ETLSTKQRSAVGLAFIGVLIMTLSFGQVPYIALTLAFSFGLYGLVKKQTQVGSMTGLSIE 187
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL--LNSFVFCIFSYGIKRAKLS 257
++ A+ ++ + + G+ L+ G + +F +G + LS
Sbjct: 188 TLMMFPIAVAFLFYTHGNVSGILHTGSDVAFTPLLLIGTGAATAVPLLLFGFGARNISLS 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G ++Y AP M++ V + + F + +++Y + K
Sbjct: 248 LIGFLQYIAPTSMLLLGVLLYGEAFTVYHAFSFVFIWTGLILYSISKFKAYQAEKR 303
>gi|56697197|ref|YP_167561.1| RarD [Ruegeria pomeroyi DSS-3]
gi|56678934|gb|AAV95600.1| RarD [Ruegeria pomeroyi DSS-3]
Length = 306
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 1/283 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + ++WG++PLY + L V EV+SHR WS +F + G L L+
Sbjct: 6 RGILAMIGTCLVWGLSPLYYKLLAHVPPPEVLSHRTFWS-VLLFGVYLAMQGRLGELRRA 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
P+ G++ +A +++++W FI ++ S Y++ P+I+V +G + ERL+
Sbjct: 65 YAGPRQTGLIALAAVMISLNWFVFILSIQLGHATEASIGYYIFPLIAVLIGRFWFAERLS 124
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A +L L++ ++T G+ I + A A K V+
Sbjct: 125 GGQWLAVVLAALAVALLTWGLGVAPWVALILSSSFALYGAVKKFLPLGPVISVTAEIVIM 184
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+P V+ G+ F G++ +L LIG G L + +FSY +R LSTVG+++Y
Sbjct: 185 MPLFLAVLAWFHLRGQGAFGGDLATSLLLIGSGPLTAIPLILFSYAARRVPLSTVGVLQY 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
P L + +V I +P + F ++ A+ V+ L +
Sbjct: 245 INPTLQFMCAVVIFGEPFTRWHGMAFALIWGAVAVFSLSLIRQ 287
>gi|308049050|ref|YP_003912616.1| RarD protein, DMT superfamily transporter [Ferrimonas balearica DSM
9799]
gi|307631240|gb|ADN75542.1| RarD protein, DMT superfamily transporter [Ferrimonas balearica DSM
9799]
Length = 304
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 1/292 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L +++LWGI PLY Q L + E+++ RV+WS+P + A++ L
Sbjct: 9 SNPARGNLLAAFSFVLWGILPLYYQLLPGAEIFELLAFRVIWSVPVMIVAMLLLRRALPD 68
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +++ + + ++ + W F +AL Q S +F+ P+ ++ G +FL
Sbjct: 69 WQTLWADKRSLLLSFVAGAVMCISWASFTWALTHGQVLAASLGFFINPLFAIAFGVLFLH 128
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L+ Q A +L L + G P +SLA+ ++ Y +K I S +E
Sbjct: 129 EKLSKAQAAAVVLAALGIAWQVWQYGELPWVSLAMGSFFALYGLIKKFIRYDSYTTLTLE 188
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L+ AL Y+ + F+G + L IG + +FS ++ L+ V
Sbjct: 189 AALLSPFALIYLGYLVFTGQSAAGADGLTGVLLYIGSAPITLAPLILFSLALRYTSLTMV 248
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G+M+Y P L + +V + + D V+ + FG++ +++ L + ++
Sbjct: 249 GLMQYIEPTLQFLLAVLLFGEVFDEVKAVSFGLIWAGLILCSLEALPKLRRH 300
>gi|212639220|ref|YP_002315740.1| putative permease [Anoxybacillus flavithermus WK1]
gi|212560700|gb|ACJ33755.1| Predicted permease [Anoxybacillus flavithermus WK1]
Length = 299
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/296 (22%), Positives = 139/296 (46%), Gaps = 6/296 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G ++ AY+LWGI PLY + L+ + E++S+R++ S + + + L
Sbjct: 3 NKKIGVIYALFAYVLWGILPLYWKMLQHIRAEEILSYRIVTSFLFMVALLFIQKSWSTFL 62
Query: 82 KDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K K V +A +++ +W +I+A+ S Y++ P+++V LG +
Sbjct: 63 HTCQWLWKEKKQAVASVMAAFLISANWFIYIWAVNHDHMVEASLGYYMNPLLNVVLGVIV 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL Q+++ +L + ++ MT+ G P ++L++A +++ Y +K I V ++ G
Sbjct: 123 LKERLYKWQVVSFILAAVGVVFMTIEYGKFPWIALSLACSFALYSLVKKVIKVDATIGLT 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE + + H ++ + L G G + FS G + L+
Sbjct: 183 IET--MFVAPFALAWIIHSFSQWHGPSFSLTTMVLLAGAGPATALPLLYFSKGAQHISLT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+G ++Y +P L ++ VF+ +P F + A++++ L + + K+
Sbjct: 241 VLGFLQYISPTLSLLLGVFLFHEPFTNAHMYAFSCIWTALLLFSLSSTWEKRREKS 296
>gi|296330454|ref|ZP_06872933.1| putative integral inner membrane protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674760|ref|YP_003866432.1| putative integral inner membrane protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152351|gb|EFG93221.1| putative integral inner membrane protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413004|gb|ADM38123.1| putative integral inner membrane protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 298
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/295 (21%), Positives = 137/295 (46%), Gaps = 3/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G L+ ++I+WG+ PLY + LEQ+ L++++HR++WS + + + +
Sbjct: 4 TETKKGVLYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQWKTG 63
Query: 81 LK--DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +LK + L ++ +++++W +I+A+ S Y++ P++SV LG +F
Sbjct: 64 WQELRSLKKNGGILSLFLASVLISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILF 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE+LN LQ++A + ++I G + +A+ + +S + +
Sbjct: 124 LKEKLNRLQLVAVSIAAAGVIISAFQYG-SIPYVALLLAFSFGLYGLSKKRTSLPSAIGL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ I + + + + L G+ + +F+ G KR L
Sbjct: 183 TLETFMIMPIALGYLLLSGHVQPAGAESGGTWMLLFFAGVFTALPLLLFAEGAKRLPLYQ 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
VGI++Y AP + ++ +F+ +P + + F + A++++ V +K+
Sbjct: 243 VGILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALLLFTFSQVKWKRASKS 297
>gi|254466296|ref|ZP_05079707.1| RarD protein [Rhodobacterales bacterium Y4I]
gi|206687204|gb|EDZ47686.1| RarD protein [Rhodobacterales bacterium Y4I]
Length = 300
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 74/296 (25%), Positives = 148/296 (50%), Gaps = 1/296 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+L T G F AY+LWG PLY + L + E++ HRV+WS+P ++
Sbjct: 4 HPTETLDTPRGLAFAVTAYLLWGFLPLYMKALSHIPAAEIVVHRVIWSVPVAGALLIVLR 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ LKNP+ +GM +A +++++WG +++++ + + + Y++ P+ S+ LG
Sbjct: 64 RT-KDLQAALKNPRMLGMACITAALISLNWGIYVWSIASGRALDAALGYYINPLFSIALG 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ L+E L Q+ A L +++++TL +G + K +
Sbjct: 123 AILLREPLGKAQMAAVALAAAAVVVLTLEAGRVPWVAVGLTLTWGFYAFLKKSLPIGANQ 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F+ ++ + + G F G++ DT L+G G++ + +++ G K +
Sbjct: 183 GFLLEVLILLAPALGYFAYLTATGSSSFGGSLSDTSLLLGCGVVTAVPLIVYANGAKLVR 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
LST+GI++Y AP ++++++V + + R I F ++ A+V+Y +P V K
Sbjct: 243 LSTMGILQYIAPTMIMLAAVLLFGEEFGQARMIAFPMIWAALVIYSVPMVRQMRKR 298
>gi|326386668|ref|ZP_08208290.1| rarD protein [Novosphingobium nitrogenifigens DSM 19370]
gi|326208983|gb|EGD59778.1| rarD protein [Novosphingobium nitrogenifigens DSM 19370]
Length = 306
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 69/285 (24%), Positives = 125/285 (43%), Gaps = 2/285 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G AY+LWG PL L V E++S RV++++P I G L L
Sbjct: 19 GLAAGLSAYVLWGFLPLLFHALRAVPPFELVSWRVVFTVPVCLAFIAATRSG-GDLLSVL 77
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
KN + + L+ SA ++ +W F+ A+ + TS Y++ P+I+V +G++FL E+L
Sbjct: 78 KNRRVLLRLMLSAVLIGSNWTLFVAAVASGHVLATSLGYYINPLINVLIGTLFLGEKLGW 137
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q A + + ++ + L +AVT++ Y RK PV + G +E L
Sbjct: 138 RQWAAVAIAATGIALLLGGAIETLSVALTLAVTFALYGLVRKLTPVKAIVGLTVETLALL 197
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y G L GL + +F+ ++ ST+G ++Y
Sbjct: 198 PLAMGYAFACTMHPGGSSLARGGLTATLLASSGLATAVPLLLFAMAARKLAFSTLGFLQY 257
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
AP + + + +L + +D ++ F ++ A+ ++
Sbjct: 258 AAPTISFLLGILVLGEHLDPLKLACFVLIWTAIGLFSWDAWRRQR 302
>gi|319788249|ref|YP_004147724.1| RarD protein, DMT superfamily transporter [Pseudoxanthomonas
suwonensis 11-1]
gi|317466761|gb|ADV28493.1| RarD protein, DMT superfamily transporter [Pseudoxanthomonas
suwonensis 11-1]
Length = 303
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 85/290 (29%), Positives = 147/290 (50%), Gaps = 3/290 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L ++LWG+ P+Y L+ V +++++HRV+WS + A + S G L+
Sbjct: 12 RRGLLVTAGTFVLWGVVPVYWHLLKMVPAMQIMAHRVVWSAL-LVVAWLMLSNGFGWLRK 70
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
P+ + L SA ++A +WG +I+A+ TS YF+ P+++V LG + L ERL
Sbjct: 71 LAAQPRVLPALALSAVLIAFNWGLYIWAVNAGHVVETSLGYFINPLVNVVLGVLVLHERL 130
Query: 144 NHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q IA L + +TL+ P ++L +A ++ Y RK + V G +E
Sbjct: 131 RRAQWIAVGCAALGVAWLTLNAGSPPWIALGLAASFGLYGLVRKLVAVDPVAGLGLESLY 190
Query: 203 LAIPALFYVVWNGFSGGEHFFLGN-IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P+L YV+W G F G L L+ G++ + F+YG++R LS VG+
Sbjct: 191 LFLPSLAYVLWAEAGHGGSFASGWGWGTDLLLVFGGVVTAVPLVGFAYGVRRIPLSVVGL 250
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y AP L ++ V+ +P R + FG + + + +Y + +S +
Sbjct: 251 LQYIAPTLQLLLGVWFFHEPFGLDRALGFGAIWLGLALYAGEGLWHSRRR 300
>gi|224367930|ref|YP_002602093.1| RarD [Desulfobacterium autotrophicum HRM2]
gi|223690646|gb|ACN13929.1| RarD [Desulfobacterium autotrophicum HRM2]
Length = 292
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 3/287 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G LF A+ WG P Y + ++ V+ E++ HR++WS + I +
Sbjct: 7 GILFGLAAFTSWGFLPAYWKQMQAVTPFEILCHRIVWSCIFLGIIISLQKR-WGEVAGIA 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P + LV S I+ +W +I+A+ + + TS Y++ P+I+V +G L ER +
Sbjct: 66 RTPAKLRALVLSGLIIGTNWFVYIWAVNSGRVVETSLGYYINPMINVLIGFFLLGERFSR 125
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ IA + ++ G PL +LA+AV+++ Y +ARK I G IE VL
Sbjct: 126 LQYIAVFFALAGVVYSLSAYGDLPLFALALAVSFAFYGYARKKIQAAPLPGLLIETMVLL 185
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+PAL Y+++ + F ++IG G++ S F+ KR LST+GI++Y
Sbjct: 186 VPALAYIIFKQVTMNSFFLKDPGLTL-WMIGAGVVTSLPLLWFAESAKRLNLSTLGILQY 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
AP + + VF+ K+ I F + + + +Y ++ S +
Sbjct: 245 LAPSIAFMLGVFVYKESFTRHNLITFTCIWMGVFLYAWESLKKSRRQ 291
>gi|325267057|ref|ZP_08133727.1| DMT superfamily drug/metabolite transporter [Kingella denitrificans
ATCC 33394]
gi|324981557|gb|EGC17199.1| DMT superfamily drug/metabolite transporter [Kingella denitrificans
ATCC 33394]
Length = 351
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 74/298 (24%), Positives = 149/298 (50%), Gaps = 4/298 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV 72
S A G L+ Y++WG+ PL+ L + +++++ R++WS +
Sbjct: 45 SARYAMNDIKKGALYALVCYLIWGVFPLFWYPLNQSDMPSIQILAQRIVWSAVFAGVLLT 104
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F + P+ +G+ +A ++A++W +++A+L S YF+ P+++V
Sbjct: 105 VFRQ-WREVVQAALRPRILGIFTLTAVLVAINWLVYLWAILNGHVLDASLGYFINPLVNV 163
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVG 191
LG VFL+E+LN L ++A L ++ + + +G P +S+ +A ++ Y RKT P+
Sbjct: 164 LLGFVFLREKLNRLHVLALCLAAGGIVWLAVPAGQIPWISIVLAASFGLYGLIRKTAPMP 223
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G +E +LA AL Y++ + G +F N T L+ G + +F+ G
Sbjct: 224 ALAGLALETFILAPVALGYLLLCFWGGTLYFSQLNALQTSVLLLSGAATTIPLLLFAEGA 283
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
KR LS +G+++Y +P L ++ + + +P++ R + +V + + V+L +
Sbjct: 284 KRIPLSLLGMLQYVSPTLQLLLGIVMFHEPLNGARLTGYALVWLGVAVFLTGSWRAHR 341
>gi|296138338|ref|YP_003645581.1| RarD protein, DMT superfamily transporter [Tsukamurella
paurometabola DSM 20162]
gi|296026472|gb|ADG77242.1| RarD protein, DMT superfamily transporter [Tsukamurella
paurometabola DSM 20162]
Length = 307
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 72/297 (24%), Positives = 144/297 (48%), Gaps = 5/297 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
GT AY+LWG+ PLY L+ E+++HR+LW+L A+V L
Sbjct: 7 SEATRGTAMGVAAYLLWGLFPLYFDALKPTGPWEILAHRILWTLVLCGAALVILR-DLGW 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ L+ P+ + + +A +++ +W +I A+ + + YF+ P+++V LG V L+
Sbjct: 66 IRPVLRQPRLLAGVTIAALLISTNWIVYIVAVTSGHTSDAALGYFLNPLVTVALGVVVLR 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGSSEGFF 197
ERL LQ +A + +L+ + + + +G ++ R + + + +G
Sbjct: 126 ERLRPLQWVAVGIGVLAFIYLAVVAGTFPVTALALAFSFGLYGLVKNRVGVHLNALQGLT 185
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E +LA A +V G GG F L G+ + +F+ +R L
Sbjct: 186 LETAILAPIAAAVLVGIGIWGGGLDFARHGAGHAALLAFAGVATAVPLLLFAAAARRIPL 245
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
T+G++++ P++ ++ +V L + + R + FGIV +A+++ L TV+ + ++
Sbjct: 246 VTIGLIQFATPIMQLLCAVLFLDEHVSPERWVGFGIVWVALILLTLDTVLALRRTRS 302
>gi|170728583|ref|YP_001762609.1| transporter DMT superfamily protein [Shewanella woodyi ATCC 51908]
gi|169813930|gb|ACA88514.1| RarD protein, DMT superfamily transporter [Shewanella woodyi ATCC
51908]
Length = 327
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/300 (21%), Positives = 132/300 (44%), Gaps = 5/300 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ E + + G +++LWG+ PLY Q+L + E+++ R+L+S+P + +
Sbjct: 18 TTEKQASSSFKGNALAAFSFLLWGLMPLYYQYLPNADINELLAFRILFSVPFMALVFLLL 77
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + ++V + ++ I+ V W F +A+ Q S +F+ P+ ++ L
Sbjct: 78 GRTMPSMSALKADKRSVALCGLASLIMCVSWYSFTWAITHGQVLAASLGFFINPLFAIGL 137
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSS 193
G +FL ++L Q +A +L + M G P L+L++ ++ Y +K I S
Sbjct: 138 GVLFLGDKLTSAQKLAVVLGTCGISYMVYSYGELPWLALSMGSFFALYGLCKKFIRFDSL 197
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI----PDTLFLIGYGLLNSFVFCIFSY 249
+E L A Y++W S + L +G L F+
Sbjct: 198 TSVTLEAIWLMPFAAIYLIWLWSSDQSVAISSALSGEVSVLLLYMGTAPLTLLPLVFFAL 257
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ LS +G+M+Y P L + +V + + D V+ + F ++ +++ L +
Sbjct: 258 AVRATSLSMIGLMQYIEPSLHFLLAVILFNEHFDQVKAVSFALIWTGLLLCSLEALPTLR 317
>gi|121728018|ref|ZP_01681057.1| rarD protein [Vibrio cholerae V52]
gi|255744007|ref|ZP_05417961.1| RarD protein [Vibrio cholera CIRS 101]
gi|262153634|ref|ZP_06028761.1| RarD protein [Vibrio cholerae INDRE 91/1]
gi|262167386|ref|ZP_06035094.1| RarD protein [Vibrio cholerae RC27]
gi|262191263|ref|ZP_06049459.1| RarD protein [Vibrio cholerae CT 5369-93]
gi|121629721|gb|EAX62140.1| rarD protein [Vibrio cholerae V52]
gi|255738272|gb|EET93663.1| RarD protein [Vibrio cholera CIRS 101]
gi|262024188|gb|EEY42881.1| RarD protein [Vibrio cholerae RC27]
gi|262030575|gb|EEY49212.1| RarD protein [Vibrio cholerae INDRE 91/1]
gi|262032868|gb|EEY51410.1| RarD protein [Vibrio cholerae CT 5369-93]
Length = 280
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 139/281 (49%), Gaps = 2/281 (0%)
Query: 36 LWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
+WGI P+Y + L VS LE++SHRV+WS + +++ + + P+ +L+
Sbjct: 1 MWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIHLGRRWRSVVGVVHTPRKFWLLL 59
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+A ++ +W FI+++ S Y++ P+++V LG +FL ERL LQ A L
Sbjct: 60 VTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLRKLQWFAVALAA 119
Query: 156 LSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ + I + + +P++++A+A ++ Y RK I V + G F+E + A Y++W
Sbjct: 120 IGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFMLPAAAIYLIWL 179
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
+ L L L+ G++ + F+ R KLST+G +Y P LM + +
Sbjct: 180 ADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQYIGPSLMFLLA 239
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V + + + + I F + A+V++ + + + +
Sbjct: 240 VLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRAR 280
>gi|134096459|ref|YP_001101534.1| chloramphenicol resistance protein [Herminiimonas arsenicoxydans]
gi|133740362|emb|CAL63413.1| putative chloramphenicol resistance permease rarD-like
[Herminiimonas arsenicoxydans]
Length = 294
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 83/290 (28%), Positives = 151/290 (52%), Gaps = 2/290 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L+ CAY++WG+ P+Y + L+++ +EV+ +R++W+L + ++ + L L
Sbjct: 4 GILYALCAYVIWGMFPIYFKSLQEIPPMEVLMYRMVWALAFL-AIVLSVRKQWAWLGPVL 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K PK + SA +L+ +W +I+A+ + S YF+TP+++V LGSV LKERL
Sbjct: 63 KQPKVLAGFTASALLLSSNWFLYIWAVNQDRVVDASLGYFMTPLVNVLLGSVILKERLRI 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ +A + L +L +T +G P I +T+ Y RKT +G+ EG +E +L
Sbjct: 123 LQWVAVGIAALGVLWLTWQNGHPPWISLMIGITFGMYGLLRKTASLGTLEGLSLETMLLF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ +++ G F + +I G + + +F+ + LST+G+M+Y
Sbjct: 183 PLAVISLLFMTSQGAHGFVDASTTTKWLMIASGPITAIPLLMFAAAARLVPLSTMGLMQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P L +++ +++ +P R I F + IA+ Y + + +S K
Sbjct: 243 ITPSLQLLAGIWLYHEPFGGARLIGFAAIWIALAFYSIDGLWSSYGRSKK 292
>gi|92114075|ref|YP_574003.1| rarD protein [Chromohalobacter salexigens DSM 3043]
gi|91797165|gb|ABE59304.1| rarD protein [Chromohalobacter salexigens DSM 3043]
Length = 307
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 3/295 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G +F AY LWG PL+ + V E+++HR++W+ + +
Sbjct: 12 ASPPDKAATKGVVFGLTAYTLWGCFPLFFAMFDGVPAWEILTHRIIWACLFLVMVVTLLG 71
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +L + + +WG +IYA+ + Q S YF+TP+I+V LG
Sbjct: 72 RWQPVKSALSSPRSLPRVLGCALL-IGFNWGLYIYAVESHQVLQASLGYFMTPLINVALG 130
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L+ER++ LQ A + +++ + + G+P +SL +A+++ Y RK + +
Sbjct: 131 MLVLRERMSRLQGAAVAIAGIAIGVQLVGLGGLPWISLCLALSFGTYGLLRKQVTLDGLS 190
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E +L L V W FSG HF TL + L F+ +R
Sbjct: 191 GLFVETLILMPLGLLAVAWFEFSGLSHFGGSVRNTTLLIASGALTALP-LLAFAGAARRL 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+LSTVG + Y P L + ++ I ++P+ ++ + F ++ +++Y L
Sbjct: 250 RLSTVGFLMYINPTLQFLIALLIFQEPLGALQLVTFVLIWAGLLLYSLSAWHGRR 304
>gi|321311593|ref|YP_004203880.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
gi|320017867|gb|ADV92853.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
Length = 298
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 62/295 (21%), Positives = 135/295 (45%), Gaps = 3/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G ++ ++I+WG+ PLY + LEQ+ L++++HR++WS + + +
Sbjct: 4 SETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQWKLG 63
Query: 81 LKDTL--KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ K + L ++ +++++W +I+A+ S Y++ P++SV LG +F
Sbjct: 64 WQELCSLKKNGGILSLFLASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILF 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE+LN LQ++A + ++I G + +A+ + +S + +
Sbjct: 124 LKEKLNRLQLVAVSIAAAGVIISAFQYG-SIPYVALLLAFSFGLYGLSKKRTSLPSAIGL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ I + + + L L G+ + +F+ G KR L
Sbjct: 183 TLETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPLYQ 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
VGI++Y AP + ++ +F+ +P + + F + A++++ V +K+
Sbjct: 243 VGILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALLLFTFSQVKWKRASKS 297
>gi|110633324|ref|YP_673532.1| transporter DMT superfamily protein [Mesorhizobium sp. BNC1]
gi|110284308|gb|ABG62367.1| RarD protein, DMT superfamily transporter [Chelativorans sp. BNC1]
Length = 306
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 181/294 (61%), Gaps = 2/294 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G LF F AY LWG+ P++ + + + +EV++HRV+WS+P ++
Sbjct: 9 PPSKGDSAQGFLFAFSAYFLWGLLPIFLKMVAHIPPMEVVAHRVVWSVPIAAVVLLLLGR 68
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ L++P+ + + +A+++ +WG +++A+ T + T+ Y++ P++S+ + +
Sbjct: 69 T-ADVRKALRSPRTLLLAALTASLITANWGLYVWAIATDRALDTALGYYINPLVSIAMAA 127
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
VFL E+ LQ+ A L ++ ++T+ G+P LSL IA+T++ Y F RKT+P+G S+G
Sbjct: 128 VFLGEKFTRLQLAAVALATAAVAVLTIESGGLPWLSLMIAMTFAVYGFLRKTLPIGPSQG 187
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
FF+E+ +L++PAL Y+ W ++G HF LG + + L+ G + + F ++++G K +
Sbjct: 188 FFLEVLILSVPALAYIAWLQWTGQGHFGLGQPENMVLLLACGPVTACPFLLYAFGAKALR 247
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+T+GIM+Y AP ++ +++VFI K+P V+ F ++ IA+ +Y P + +
Sbjct: 248 YATIGIMQYIAPSMVFITAVFIFKEPFSRVQAFTFALIWIALALYTWPMLRGAK 301
>gi|226307019|ref|YP_002766979.1| hypothetical protein RER_35320 [Rhodococcus erythropolis PR4]
gi|226186136|dbj|BAH34240.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 312
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 151/292 (51%), Gaps = 4/292 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
E A + G + A++LWG P + L+ +E+++HRV+W+L + + +
Sbjct: 5 ERARSGSSSGIFYGVAAFLLWGTFPAFFGLLDFADPVEILAHRVVWTLLLMLIVLAFAGR 64
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
SL + + ++ ++ +AV+WG +IYA+++ + + YF+ P+++V LG
Sbjct: 65 LGSLRGISARTWL---LVTAASAAIAVNWGTYIYAVVSGRVVEAALGYFINPLVTVLLGV 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V +ERL QI A +L +++++T+ G P+++L +A +++ Y +K +P+G
Sbjct: 122 VIFRERLRRAQIAALVLAATAVVVITVDFGKPPIVALVLAGSFATYGLVKKVVPLGPRTS 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E V A A+ Y+V+ G +G F +L L+ G + + +F +R
Sbjct: 182 LTAEGVVAAPFAVGYLVFLGLTGAGAFISSGAGHSLLLLAAGPVTALPLLLFGVAAQRVP 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
L+T+G+++Y P L + V ++ + + R I F ++ A+V++ T +
Sbjct: 242 LATMGMLQYLTPALQMAWGVAVMHEDMPASRWIGFVLIWAALVIFTTDTFVA 293
>gi|15616428|ref|NP_244733.1| hypothetical protein BH3866 [Bacillus halodurans C-125]
gi|10176491|dbj|BAB07585.1| BH3866 [Bacillus halodurans C-125]
Length = 308
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 75/300 (25%), Positives = 156/300 (52%), Gaps = 5/300 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + AY++WG PLY + +++V E+++HR++WSL + +
Sbjct: 1 MKNQQKTGVIAAISAYLIWGFLPLYWKLVDEVPASEMLAHRIVWSLGFMVILLAVMKKNR 60
Query: 79 SLLKDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++++ L N K + +A +++++W FIYA+ + + S Y++ P+I+V L
Sbjct: 61 QVMREILDTLANKKTAFGITVAAILISMNWFIFIYAVSSDKVIEASLGYYINPLINVLLA 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VFL+E L+ ++ + LL +L +TLH G P ++ A+A+++ Y +K + + +
Sbjct: 121 IVFLRESLSKWEVASFLLAAAGVLNITLHYGSFPWVAFALAISFGVYGLIKKVVSLSAWA 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGG-EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE ++ AL ++++ SGG F L ++ +I G + +F+ G KR
Sbjct: 181 SLTIETLIMTPFALLFLLYIPLSGGASAFSLNHLSTAWLIIASGAATALPLLLFATGAKR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S +G ++Y AP +M++ VF+ ++P V+ + F ++ ++++ + +G+ K
Sbjct: 241 ISFSLIGFLQYLAPTIMLMLGVFLFQEPFSRVQFVSFLLIWTGLIIFTISRSRTAGRLKK 300
>gi|116872173|ref|YP_848954.1| permease, putative [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116741051|emb|CAK20171.1| permease, putative [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 306
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPFAAIGMAVTFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVIFFATNGLMQYPAQTNIIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|329769417|ref|ZP_08260830.1| RarD protein [Gemella sanguinis M325]
gi|328838987|gb|EGF88578.1| RarD protein [Gemella sanguinis M325]
Length = 305
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 65/295 (22%), Positives = 140/295 (47%), Gaps = 4/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGG 77
T + + Y WG+ P+Y + L+ + EV+S RVL S + ++
Sbjct: 2 SNTKKSLIAILICYFSWGLFPIYFKLLKSIDAYEVLSLRVLCSFIFMVLVVLVAANKKFI 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +K+ K+ K+ +L+ ++ ++ +W +I A+ + SF Y++ P++++ L V
Sbjct: 62 FNEIKEVWKDKKSFILLIAASLLITANWLTYIIAVNSNHVLEASFGYYLNPIVTIILAVV 121
Query: 138 FLKERLNHLQIIA-ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FLKE+L +Q IA + L + +P +S+ +A+T+ Y +K I +
Sbjct: 122 FLKEKLTRVQTIACLCVGASLLYLFISLGSLPWISILLALTFGLYSLCKKKIVLSPKASL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E +++ AL Y+ + G + F ++ + G++ + +F+ G L
Sbjct: 182 LVETAIVSPIALTYMWYLGTNSNITFHTYGTSTLIYALLSGVVTAVPLMLFAKGAIDIPL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+GI++Y P + + +F+ + + + I F I+ +A++V+ V + K
Sbjct: 242 YLLGILQYLPPTMQFLIGIFVYGEELSIQKLISFAIIWVAVIVFCYSAVTSMKKQ 296
>gi|329944622|ref|ZP_08292762.1| protein RarD [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530175|gb|EGF57058.1| protein RarD [Actinomyces sp. oral taxon 170 str. F0386]
Length = 308
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 62/294 (21%), Positives = 129/294 (43%), Gaps = 6/294 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
V Y LWG+ PLY + L +E+I HR++W+L ++ + L +
Sbjct: 1 MALVIGCYTLWGVFPLYFRLLSAAGSVEIIGHRIVWTLVTCLL-LIAARHRWAQLVRVAR 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P+ +G L +++V+W ++Y + T + + YF+ P+++V L S+ L+ERL +
Sbjct: 60 TPRLLGALTVCGLLVSVNWLVYVYGVNTARTADAALGYFINPLVTVALASLVLRERLRPV 119
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGSSEGFFIEMCVL 203
++ +L +++++ + G A R V + G +E V+
Sbjct: 120 HRVSIVLASAAVVLLVVLQGSLPWISLALAFSFALYGLVKKRIGPQVDALTGLTVESAVV 179
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG--LLNSFVFCIFSYGIKRAKLSTVGI 261
A AL Y+ + G + ++ + + + +F+ G +R LS VG+
Sbjct: 180 APLALSYLGHLAWQGHSAWQAPQAGWSVMALLAVAGPVTAVPLLLFAAGTRRVPLSVVGM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y AP+ + + + + I R +V +A+ V++ V ++ +
Sbjct: 240 SQYIAPITQFLLAWAVFHEQIPPARWAAMVLVWVAVAVFIGDAVHQLLRHPRPR 293
>gi|291484542|dbj|BAI85617.1| hypothetical protein BSNT_03172 [Bacillus subtilis subsp. natto
BEST195]
Length = 298
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 63/295 (21%), Positives = 136/295 (46%), Gaps = 3/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G ++ ++I+WG+ PLY + LEQ+ L++++HR++WS + + +
Sbjct: 4 SETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQWKIG 63
Query: 81 LK--DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +LK + L ++ +++++W +I+A+ S Y++ P++SV LG +F
Sbjct: 64 WQELRSLKKNGGILSLFLASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILF 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE+LN LQ++A + ++I G + +A+ + +S + +
Sbjct: 124 LKEKLNRLQLVAVSIAAAGVIISAFQYG-SIPYVALLLAFSFGLYGLSKKRTSLPSAIGL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ I + + + L L G+ + +F+ G KR L
Sbjct: 183 TLETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPLYQ 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
VGI++Y AP + ++ +F+ +P + + F + A++++ V +K+
Sbjct: 243 VGILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALILFTFSQVKWKRASKS 297
>gi|315281458|ref|ZP_07870080.1| protein RarD [Listeria marthii FSL S4-120]
gi|313614901|gb|EFR88423.1| protein RarD [Listeria marthii FSL S4-120]
Length = 306
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 78/302 (25%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YVV+ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVVFFATNGLMQYAAQTNVIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|268591318|ref|ZP_06125539.1| protein RarD [Providencia rettgeri DSM 1131]
gi|291313294|gb|EFE53747.1| protein RarD [Providencia rettgeri DSM 1131]
Length = 308
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G +YILWGITPL+ + L LE+++ R++WS+P +F + SL ++
Sbjct: 4 RSGVALAIFSYILWGITPLFYRLLPGAEPLELLAERLIWSVPILFLVRLIIK-NKSLWRE 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +++ + +FS++++A+ W F YAL Q S YF+ P+ S+ LG +FL+ERL
Sbjct: 63 VWSDKQSIILCLFSSSVMAISWTTFTYALTHGQVLAASLGYFINPLFSILLGVLFLRERL 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +A + I + G P+L+L + ++ Y RK I F+E
Sbjct: 123 VFAEKMAVIFICAGVGYQIWQYGELPILALVMGSAFAVYGLIRKFIRFDVITSLFLEALW 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L A+ W G G+ + + + F+ IKR L+ +G+
Sbjct: 183 LLPIAIAITWWLASHGLSAVTQGDWQIKVLYMLAAPVTIIPLLFFTAAIKRTSLTVIGLA 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+Y P + + +VF+ + D V+ I F ++ I ++ +L +
Sbjct: 243 QYIEPTIQFLLAVFLFNELFDWVKGISFSLIWIGLMFCVLAILRKQ 288
>gi|89056011|ref|YP_511462.1| rarD protein [Jannaschia sp. CCS1]
gi|88865560|gb|ABD56437.1| rarD protein [Jannaschia sp. CCS1]
Length = 296
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 98/295 (33%), Positives = 171/295 (57%), Gaps = 2/295 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ T G + AY+LWG P+Y + L + E+++HRV+WSLP + I
Sbjct: 2 AQPQHDDTPAGYAYAVSAYVLWGGLPIYLKALSHIPAPEIVAHRVIWSLPIIGLLIWITG 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ LK L++P+ + M +A ++V+WG +I+A+ + + Y++ P+ SVFLG
Sbjct: 62 RT-ADLKVALRSPRLLAMAAVTALFISVNWGVYIWAIANDRALDGALGYYINPLFSVFLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+V L E L+ LQ A L L+++++T+ G P ++LA+ ++W Y F ++ +P+G ++
Sbjct: 121 AVLLGESLSRLQWSAVALAALAVIVLTVEEGRLPWVALALMLSWGGYAFCKRKLPIGPNQ 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GFF+E+ +L +PAL YV W G +G F G D+ L+G GL+ + ++ G K
Sbjct: 181 GFFLEVAILCVPALAYVAWLGATGQGSFMAGVPWDSWLLLGCGLVTAIPLILYVNGAKLL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+LST+GI++Y AP L+ + +VF+ +P T R I F ++ IA+++Y + S
Sbjct: 241 RLSTIGILQYIAPTLIFLVAVFLFNEPFGTARMIAFPMIWIALILYSIALFRRSR 295
>gi|186475935|ref|YP_001857405.1| transporter DMT superfamily protein [Burkholderia phymatum STM815]
gi|184192394|gb|ACC70359.1| RarD protein, DMT superfamily transporter [Burkholderia phymatum
STM815]
Length = 374
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 62/294 (21%), Positives = 119/294 (40%), Gaps = 6/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N G + A WG+ PLY +L++VS E+++HRV WS + AI
Sbjct: 4 NNQKEEGAGYGALLLALCWWGLMPLYYWYLKEVSAPEMLAHRVFWSFAVLSAAIAL---- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + N ++ + + A +L+ +W +I A +T S YF+ P++S LG V
Sbjct: 60 KPALRQQMGNWRSFVLALVPAVLLSANWVVYILASVTGNALQASLGYFLNPLVSAALGIV 119
Query: 138 FLKERLNHLQIIAALLIILS--LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
FL ERL+ L+ +A L + + + + +
Sbjct: 120 FLNERLSGLKAVALALGLAGTFVQCYARGGVPVFAVMLTVTFSLLGLARKVWPTRNAIVS 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ E V+ AL Y + + F I ++ ++ G L +++Y +
Sbjct: 180 TWRETVVMMPFALGYFGYQTWHHALAFTSNGIDASVLMMMAGPLTVVPLALYAYAMPLVS 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
L+ +M+Y P + V ++ + + + V +G++ + + TV
Sbjct: 240 LTESAVMQYVTPAVTFVLALTVFDERLTAVDLTGYGLIWCGLALATYATVRRRR 293
>gi|296130534|ref|YP_003637784.1| RarD protein, DMT superfamily transporter [Cellulomonas flavigena
DSM 20109]
gi|296022349|gb|ADG75585.1| RarD protein, DMT superfamily transporter [Cellulomonas flavigena
DSM 20109]
Length = 302
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 2/296 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ S G AY+LWG PLY L +E+I+HRV+WSL ++ +
Sbjct: 1 MDAPSPTRRGGLAAGVAAYVLWGGLPLYFPLLAPSDPVEIIAHRVVWSLLF-CLVLLQLT 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G +++ + L +A +LAV+W F++ + T + YF+ P++++ L
Sbjct: 60 GTWRAFAGIVRDRGLLPRLTLAAVLLAVNWLVFVHGVTTGHVVDAALGYFINPLVTIALA 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L ERL +Q +A + +++++T+ G P ++L +AV++ Y + + +
Sbjct: 120 VLVLGERLRTVQWVAVGCGVAAVVVLTVGYGRLPWIALVLAVSFGCYGLIKSRVGARVAA 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + L L G G+L + +F+ +R
Sbjct: 180 LPGLAAETAVLAPVAIGYLAWLHATGVGTFAVDLHGLALAGTGVLTAVPLLLFNSAARRL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L+TVG+++Y AP+L + V + + + R FG+V +A+ V + + +S +
Sbjct: 240 PLTTVGLLQYLAPVLQLAIGVLVAGEQMPPARWWGFGLVWVALAVLTVDGLRHSRR 295
>gi|237802402|ref|ZP_04590863.1| rarD protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025259|gb|EGI05315.1| rarD protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 295
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + CAYI+WG+ PLY + + V +E+I HR LWS ++ +
Sbjct: 2 QAANPRRGYILGLCAYIIWGLFPLYFKAIAAVPAIEIIIHRALWSALFGSIVLMLWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG V
Sbjct: 61 GWWSDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMVL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L + H +P +SLA+ +T++ Y RK PV + G
Sbjct: 121 LGERLRRLQWVAVALAATGVAQQVWHVGSLPWVSLALPLTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++V N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLVLNPTAVSTQAEFWTTTQAIWLAAAGPVTLIPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S +
Sbjct: 241 TLGFLQYVAPTLVLLLAVLLYGEQLTTSTLITFAFIWAGLAIYSVDIWLKSRGRR 295
>gi|119944488|ref|YP_942168.1| transporter DMT superfamily protein [Psychromonas ingrahamii 37]
gi|119863092|gb|ABM02569.1| RarD protein, DMT superfamily transporter [Psychromonas ingrahamii
37]
Length = 294
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 81/290 (27%), Positives = 149/290 (51%), Gaps = 2/290 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T +G ++ AY+LWGI P++ ++L + V E+++HRV+WS+ + I + G
Sbjct: 5 SQTQLGIVYALSAYLLWGINPIFFKYLGFIPVYEILAHRVIWSVVFIAIVITFLGG-WGK 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK PK + L ++ +++V+W FI+A+ + S YF+ P+I+V LG VFL
Sbjct: 64 ALSILKTPKNILFLTCTSLLISVNWSVFIWAINNGRMLEASLGYFINPLINVVLGLVFLN 123
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ ++ IA L ++ +LI + +P +SL + +++ Y RK I + + G F E
Sbjct: 124 EALSRVKWIAVSLALIGVLIQVVQVGSLPWVSLVLPISFGFYGLLRKKIKIEALIGLFFE 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ AL+Y+ + + N L+L+ G+ + F+ R KLST+
Sbjct: 184 TLLVLPVALYYLFFVANGENVNMLNNNWSLNLWLMFTGIATAMPLFFFAQAALRLKLSTL 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G +Y AP +M + +VFI + + R I F + ++++ +
Sbjct: 244 GFFQYLAPSMMFLMAVFIYGEVLSLARIITFIFIWAGILLFAGENKLKKW 293
>gi|50812251|ref|NP_389830.2| integral inner membrane protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309847|ref|ZP_03591694.1| hypothetical protein Bsubs1_10761 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314170|ref|ZP_03595975.1| hypothetical protein BsubsN3_10687 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319093|ref|ZP_03600387.1| hypothetical protein BsubsJ_10618 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323366|ref|ZP_03604660.1| hypothetical protein BsubsS_10732 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81341986|sp|O31859|YOJE_BACSU RecName: Full=Uncharacterized transporter yojE
gi|32468774|emb|CAB13840.2| putative integral inner membrane protein [Bacillus subtilis subsp.
subtilis str. 168]
Length = 298
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 63/294 (21%), Positives = 136/294 (46%), Gaps = 3/294 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G ++ ++I+WG+ PLY + LEQ+ L++++HR++WS + + +
Sbjct: 5 ETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQWKIGW 64
Query: 82 K--DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +LK + L ++ +++++W +I+A+ S Y++ P++SV LG +FL
Sbjct: 65 QELRSLKKNGGILSLFLASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILFL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+LN LQ++A + ++I G + +A+ + +S + +
Sbjct: 125 KEKLNRLQLVAVSIAAAGVIISAFQYG-SIPYVALLLAFSFGLYGLSKKRTSLPSAIGLT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ I + + + L L G+ + +F+ G KR L V
Sbjct: 184 LETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPLYQV 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
GI++Y AP + ++ +F+ +P + + F + A++++ V +K+
Sbjct: 244 GILQYIAPTITLLIGLFVYHEPFSSSKAFTFSCIWAALLLFTFSQVKWKRASKS 297
>gi|329923564|ref|ZP_08279026.1| protein RarD [Paenibacillus sp. HGF5]
gi|328941207|gb|EGG37505.1| protein RarD [Paenibacillus sp. HGF5]
Length = 292
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 80/290 (27%), Positives = 146/290 (50%), Gaps = 2/290 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + AYI+WG+ PLY + E V E++SHRV+WS + + +K
Sbjct: 4 GLVNAIIAYIMWGVLPLYWKLFENVPAGEILSHRVVWSFVFMGILVAVQRR-WGDMKRVA 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + L S ++A +W FI+A+ TS Y++ P+++V L VFL+E+ N
Sbjct: 63 ASRSLLLSLAASGLLIAANWLIFIWAVNNGHVVETSLGYYLNPLLNVLLAVVFLREKPNR 122
Query: 146 LQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q + + ++LI+ + G P +++++AV++ Y A+K I +S G E V+
Sbjct: 123 GQWLGIAIAGAAVLIIAIDYGRFPWVAISLAVSFGLYGLAKKKIVQDASVGLLSETAVIL 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL Y ++ G + P + L+ G++ + F+ R LST+G ++Y
Sbjct: 183 PVALGYWIYLAAVGKTTAWTLPAPVFVELLLSGVVTALPLLFFARAAARMALSTLGFVQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P +M++ S+F+ K+ + V I F ++ A+VVY + +V ++ K
Sbjct: 243 IGPTIMLLLSIFVFKESVSPVLLIGFALIWTALVVYAVASVRSTKLAKAS 292
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 50/140 (35%)
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF 223
++G+ +A + + + V + E + + V G
Sbjct: 2 NNGLVNAIIAYIMWGVLPLYWKLFENVPAGEILSHRVVWSFVFMGILVAVQRRWGDMKRV 61
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ L L GLL + + IF + + + + Y PLL ++ +V L++ +
Sbjct: 62 AASRSLLLSLAASGLLIAANWLIFIWAVNNGHVVETSLGYYLNPLLNVLLAVVFLREKPN 121
Query: 284 TVRTIVFGIVVIAMVVYLLP 303
+ + I A+++ +
Sbjct: 122 RGQWLGIAIAGAAVLIIAID 141
>gi|111018083|ref|YP_701055.1| RarD family permease [Rhodococcus jostii RHA1]
gi|110817613|gb|ABG92897.1| possible permease, RarD family protein [Rhodococcus jostii RHA1]
Length = 305
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 75/288 (26%), Positives = 143/288 (49%), Gaps = 4/288 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A +G AY+LWG P + L +E+++HRV+W+L +F + S
Sbjct: 3 ARHAETVGAACGVGAYVLWGAFPAFFGLLGPAGSVEILAHRVVWTLALMFVVLAVSSRLR 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
SL +++ ++ ++T +AV+WG +IY + + + T+ YF+ P++SV LG V
Sbjct: 63 SLRGLSVRTWL---LVTAASTAIAVNWGTYIYGVTSDRVVETALGYFINPLVSVLLGVVI 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFF 197
+ERL QI+A L ++++++T+ G P +A +++ Y +K +P+
Sbjct: 120 FRERLVPAQIVALALAAVAVIVITVDYGHPPYIALTLAASFALYGLCKKVVPLDPRTSLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E V A A+ Y+V+ +G F TL L+ G + + +F +R L
Sbjct: 180 AEGIVAAPVAVGYLVFLALTGAGTFLGFGSGHTLLLMAAGPVTALPLLLFGAAAQRVPLR 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
T+G+++Y P L + V +L + + R I F ++ +A+ ++ +
Sbjct: 240 TLGMLQYLTPALQMAWGVAVLHEDMPASRWIGFALIWVALAIFSTDAL 287
>gi|284801126|ref|YP_003412991.1| hypothetical protein LM5578_0875 [Listeria monocytogenes 08-5578]
gi|284994268|ref|YP_003416036.1| hypothetical protein LM5923_0830 [Listeria monocytogenes 08-5923]
gi|284056688|gb|ADB67629.1| hypothetical protein LM5578_0875 [Listeria monocytogenes 08-5578]
gi|284059735|gb|ADB70674.1| hypothetical protein LM5923_0830 [Listeria monocytogenes 08-5923]
Length = 306
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVIFFATNGLMQYAAETNIIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|71908581|ref|YP_286168.1| RarD protein [Dechloromonas aromatica RCB]
gi|71848202|gb|AAZ47698.1| RarD protein [Dechloromonas aromatica RCB]
Length = 295
Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 74/293 (25%), Positives = 141/293 (48%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + AY++WG PLY L +S ++++S+R W+ V +
Sbjct: 2 SPKKQLAGIGYGLLAYVIWGFFPLYFHQLGAISPMDILSNRTAWAFVFVTILLTLRQRWK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + + + +A +L +W F++A+ Q +S YF+TP+++V LG +
Sbjct: 62 NVFALFSAPRHVIRLSI-AAMLLGSNWLGFLWAVNHHQVVASSLGYFLTPLVNVLLGLLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERLN + +A L I+++ + G P +SL +A ++ Y RK +PV + G +
Sbjct: 121 LKERLNAKEWLAIALAIVAVGNELIALGTLPWISLFLAGSFGIYGLLRKQVPVDAISGLW 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E + L Y W G F L + T LIG G+L + F+ +R L+
Sbjct: 181 LETMAMLPICLLYAGWQAQQGHAVFTLVDGTSTALLIGSGILTALPLMAFAAATQRLDLA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TVG++ Y P + V+++F+ +P+ R F ++ + + ++ +
Sbjct: 241 TVGMLMYINPTMQFVTAIFVFGEPLQPARLASFALIWLGLFIFSWSAWEKYRR 293
>gi|93006035|ref|YP_580472.1| rarD protein [Psychrobacter cryohalolentis K5]
gi|92393713|gb|ABE74988.1| rarD protein [Psychrobacter cryohalolentis K5]
Length = 319
Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 62/296 (20%), Positives = 118/296 (39%), Gaps = 1/296 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G + A+ +WG PLY + L + E+I HR++W+ + +V
Sbjct: 15 KTTRRGIVTALIAFSIWGAFPLYFKQLSDYNATEIIGHRIVWTFACLLVVLVVTKR-WQW 73
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ KNP+ + S I+A++W +++A+ Q S YF+ P++ V L + K
Sbjct: 74 IDTLKKNPRWIAYTFVSGIIIAINWLTYVWAVNNNQILEASLGYFIGPLVGVGLSMLLFK 133
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL LQ +A +LS++I + G I + + ++
Sbjct: 134 ERLRTLQWVAIGFALLSVVIQVVMLGSLPWVSLILAFSFSTYGTIQRQTPLTAVDAMFVE 193
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ +P W + P L+ G + +F+ K S +
Sbjct: 194 TAMLLPIFIAWFWQSDVASSNISFWFTPSIWLLMLAGPITLIPLLMFNKSTKLVAYSILS 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
M Y P + +VF +P D R VFG++ + ++++ + + + K +
Sbjct: 254 FMNYLTPTFIFFLAVFYYNEPFDLHRLAVFGLIWLGLLLFSIDLWRHRPSKQLKAA 309
>gi|289650630|ref|ZP_06481973.1| rarD protein [Pseudomonas syringae pv. aesculi str. 2250]
Length = 295
Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 70/294 (23%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG+ P+Y + + V +E+I HRVLWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLFPIYFKAISAVPAIEIIIHRVLWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRPAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + + +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFATIGVAQQVWNVGSLPWVSLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVSAQPEFWTTTQAIWLAAAGPVTLIPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYLAPTLVLLLAVLLYGEHLTTSTIITFAFIWAGLAIYSVDIWLKSRSR 294
>gi|269128598|ref|YP_003301968.1| RarD protein, DMT superfamily transporter [Thermomonospora curvata
DSM 43183]
gi|268313556|gb|ACY99930.1| RarD protein, DMT superfamily transporter [Thermomonospora curvata
DSM 43183]
Length = 304
Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 4/283 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G AY LWG+ PLY L+ E++ HR++WSL V +
Sbjct: 7 RRGLASGIAAYGLWGLFPLYWPLLKPAGATEILGHRIMWSLVTVLVILAVRRSWR---WV 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
P+ + +L +A ++ +WG FIYA+ T + YF+ P+ISV LG + +ERL
Sbjct: 64 RELTPRTLALLALAAAVIGANWGAFIYAVNTGHTLEAALGYFINPLISVLLGVLVFRERL 123
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q A L +++L++ + G P ++L +A ++ Y +K + S+E E V
Sbjct: 124 RPWQWGAIGLGAVAVLVLAVDYGRPPWIALTLACSFGLYGMVKKFADMPSAESLAAESAV 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L +PAL Y + G F + L L G GL+ + +F+ R LS +G++
Sbjct: 184 LFLPALAYALLLQGQGSAAFGHAGLGHALLLAGSGLVTAVPLMLFNAAAVRIPLSALGML 243
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+Y P+L + + + +P+ R I F +V A+V+
Sbjct: 244 QYLTPVLQFLIGLLVQHEPMPAGRWIGFLLVWTALVILTADGF 286
>gi|327483076|gb|AEA77483.1| Protein rarD [Vibrio cholerae LMA3894-4]
Length = 280
Score = 99.2 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 139/281 (49%), Gaps = 2/281 (0%)
Query: 36 LWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
+WGI P+Y + L VS LE++SHRV+WS + +++ S + + P+ +L+
Sbjct: 1 MWGIAPIYFKALGAVSALEILSHRVVWSFV-LLAVLIHLSRRWRSVVGVVHTPRKFWLLL 59
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+A ++ +W FI+++ S Y++ P+++V LG +FL ERL LQ A L
Sbjct: 60 VTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLRKLQWFAVALAA 119
Query: 156 LSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ + I + + +P++++A+A ++ Y RK I V + G F+E + A Y++W
Sbjct: 120 IGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFMLPAAAIYLIWL 179
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
+ L L L+ G++ + F+ R KLST+G +Y P LM + +
Sbjct: 180 ADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQYIGPSLMFLLA 239
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V + + + + I F + A+V++ + + +
Sbjct: 240 VLVYGEAFTSDKAITFAFIWSALVIFSTDGLKAGHAARRAR 280
>gi|82779000|ref|YP_405349.1| hypothetical protein SDY_3924 [Shigella dysenteriae Sd197]
gi|309784539|ref|ZP_07679177.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|81243148|gb|ABB63858.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308927645|gb|EFP73114.1| conserved hypothetical protein [Shigella dysenteriae 1617]
Length = 297
Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 3/296 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK-RAKLS 257
E L A Y+ S H I L LI G++ + F+ R +LS
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPISLNLLLIAAGIVTTVPLLCFTAAATTRLRLS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
T+G +Y P LM + +V + + + F + +A+ ++++ + +
Sbjct: 242 TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK 297
>gi|149375462|ref|ZP_01893232.1| rarD protein [Marinobacter algicola DG893]
gi|149360167|gb|EDM48621.1| rarD protein [Marinobacter algicola DG893]
Length = 299
Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 1/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++A+ G F AY LWG P+Y E V EV+ HR++WS + + +
Sbjct: 1 MKHATPEAAKGVGFGLSAYTLWGCFPIYFALFEGVPSYEVLVHRIVWSCVFLAIVVSFLG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + K + + +A++WG +IYA+ TR S YF+TP+++V LG
Sbjct: 61 RWKPVTAALARPKKLGFVFGCA-VFIALNWGVYIYAVETRHVLQASLGYFLTPLVNVGLG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ L+E ++ LQI+A L +++L G+ + +
Sbjct: 120 MLVLRESISRLQIVAVALATIAILYQLFLLGVVPWITLVLAFSFGTYGLLRKQVELDGLS 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L +P + S GE F +I L L+ G++ + F+ +R +
Sbjct: 180 GLFVETLLLLPVGLLTLGFLSSVGESHFNDDITIALLLMSSGIVTAIPLLFFAGAARRLR 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
L+TVG + Y P L ++F+ +P+ + F ++ +A+ +Y I G N T K
Sbjct: 240 LATVGFLMYINPTLQFFIALFVFDEPMSGEKLASFVMIWVALGLYSWSAWIGRGVNPTPK 299
>gi|298489196|ref|ZP_07007215.1| Protein rarD [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298156278|gb|EFH97379.1| Protein rarD [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 295
Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 70/294 (23%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG+ P+Y + + V +E+I HRVLWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLFPIYFKAISAVPAIEIIIHRVLWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + + +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFATIGVAQQVWNVGSLPWVSLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVSAQPEFWTTTQAIWLAAAGPVTLIPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYLAPTLVLLLAVLLYGEHLTTSTIITFAFIWAGLAIYSVDIWLKSRSR 294
>gi|212711336|ref|ZP_03319464.1| hypothetical protein PROVALCAL_02408 [Providencia alcalifaciens DSM
30120]
gi|212686065|gb|EEB45593.1| hypothetical protein PROVALCAL_02408 [Providencia alcalifaciens DSM
30120]
Length = 308
Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G +YILWGITPL+ + L +E+++ R++WS+P +F I SL K
Sbjct: 4 RSGVALAIFSYILWGITPLFYRLLPDAQAMELLAQRLIWSIPFLF-VIRLLIKNKSLWKQ 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +++ + +FS++I+AV W F YAL Q S YF+ P+ S+ LG +FL+ERL
Sbjct: 63 VWADKRSIVLCLFSSSIMAVSWTTFTYALTHGQVLAASLGYFINPLFSILLGVIFLRERL 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +A + I ++ + G P+L+L + ++ Y RK I F+E
Sbjct: 123 VFAEKLAVVFIFSGVVYQIIQYGELPVLALVMGSAFAVYGLIRKFIRFDVITSLFLEALW 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L A+ W G G+ + + + F+ IKR L+ +G+
Sbjct: 183 LLPLAVGITWWLSAHGISAVANGDWQTKILYMLAAPVTIIPLLFFTAAIKRTTLTVIGLA 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P + + +VF+ + D V+ + F ++ I ++ +L + ++
Sbjct: 243 QYIEPTIQFLLAVFLFNEVFDWVKGVSFTLIWIGLLFCVLALLHKRYGKGARR 295
>gi|154148183|ref|YP_001406415.1| RarD protein [Campylobacter hominis ATCC BAA-381]
gi|153804192|gb|ABS51199.1| RarD protein [Campylobacter hominis ATCC BAA-381]
Length = 292
Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 75/292 (25%), Positives = 149/292 (51%), Gaps = 4/292 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P + + +++WG+ P+Y + LE V +EV++HRV+WSL +F I Y
Sbjct: 2 QKNPNTLALITGIATFMMWGLFPIYFKLLENVPAIEVLAHRVVWSLLFLFMIIAYRKRIK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++++ N K + L + ++A +WG +IYA+ T + S Y + P+ S+ LG++F
Sbjct: 62 NIIR-YTGNKKLMRALFLTGVLIASNWGIYIYAVSTDRILYASLGYLINPLFSILLGAIF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE+L+ I+ L++ ++ G IP +SL + T++ Y +K I + + +G F
Sbjct: 121 LKEKLSRPTKISICLVVAAIANEMYALGEIPFISLLLPGTFAIYGLLKKQIQIAAIDGLF 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E ++ A+ Y+ + G SG F L G++ F++ KL
Sbjct: 181 FETMLIFPLAIIYLSFLGISGNGAFSFS--KTGFLLAFSGIVTVLPLITFNFAAVHLKLQ 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G ++Y +P++ ++ +VF+ + ++ + I F I++ + + L ++
Sbjct: 239 TIGFLQYISPIIAVLLAVFVYGEHLEMHKIISFAIILAGLAIVSLSGILRRK 290
>gi|254899970|ref|ZP_05259894.1| RarD protein [Listeria monocytogenes J0161]
gi|254911478|ref|ZP_05261490.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254935804|ref|ZP_05267501.1| rarD protein [Listeria monocytogenes F6900]
gi|290893758|ref|ZP_06556738.1| rarD protein [Listeria monocytogenes FSL J2-071]
gi|258608391|gb|EEW20999.1| rarD protein [Listeria monocytogenes F6900]
gi|290556707|gb|EFD90241.1| rarD protein [Listeria monocytogenes FSL J2-071]
gi|293589420|gb|EFF97754.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|313609979|gb|EFR85355.1| protein RarD [Listeria monocytogenes FSL F2-208]
Length = 306
Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHMQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|120609585|ref|YP_969263.1| transporter DMT superfamily protein [Acidovorax citrulli AAC00-1]
gi|120588049|gb|ABM31489.1| RarD protein, DMT superfamily transporter [Acidovorax citrulli
AAC00-1]
Length = 292
Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 76/286 (26%), Positives = 147/286 (51%), Gaps = 2/286 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L+ AY+ WG+ P+Y + V LEV+ HR LWS+ + ++ L+ +
Sbjct: 4 GILYATLAYVTWGVFPVYFHQVASVPALEVVLHRTLWSMV-LLAVVLAARRQLAWVAALR 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P+ V + SA +L+ +W +++A+ + S YF+ P+++V +G FL ER
Sbjct: 63 RQPRVVAAFLLSALLLSANWLIYVWAVHHQHVVDASLGYFILPLVNVAMGYAFLHERPRP 122
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A + +L +T+ +G P ++L +A+T+ Y RKT +G+ EG +E +LA
Sbjct: 123 GQWLALAVAAAGVLWLTVQAGRLPWIALVLALTFGFYGLLRKTAVLGAMEGLALETALLA 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ + W G++G + + +L+ G + + +F+ G +R L+T+G+++Y
Sbjct: 183 PLAVGGLAWLGWTGQAAWRTADAATLGWLVAAGPITAIPLLLFAAGARRIPLATMGVLQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+P L V++ + + R F ++ A+V+Y L +
Sbjct: 243 ISPSLQFALGVWLFGEAVQPARLAGFVLIWAALVLYTLEGTWRRRR 288
>gi|226223413|ref|YP_002757520.1| hypothetical protein Lm4b_00811 [Listeria monocytogenes Clip81459]
gi|254823937|ref|ZP_05228938.1| rarD protein [Listeria monocytogenes FSL J1-194]
gi|254828879|ref|ZP_05233566.1| rarD protein [Listeria monocytogenes FSL N3-165]
gi|254830217|ref|ZP_05234872.1| hypothetical protein Lmon1_02612 [Listeria monocytogenes 10403S]
gi|254853786|ref|ZP_05243134.1| rarD protein [Listeria monocytogenes FSL R2-503]
gi|255026311|ref|ZP_05298297.1| hypothetical protein LmonocytFSL_08085 [Listeria monocytogenes FSL
J2-003]
gi|255521185|ref|ZP_05388422.1| hypothetical protein LmonocFSL_08175 [Listeria monocytogenes FSL
J1-175]
gi|300765102|ref|ZP_07075089.1| rarD protein [Listeria monocytogenes FSL N1-017]
gi|225875875|emb|CAS04579.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258601291|gb|EEW14616.1| rarD protein [Listeria monocytogenes FSL N3-165]
gi|258607168|gb|EEW19776.1| rarD protein [Listeria monocytogenes FSL R2-503]
gi|293593163|gb|EFG00924.1| rarD protein [Listeria monocytogenes FSL J1-194]
gi|300514227|gb|EFK41287.1| rarD protein [Listeria monocytogenes FSL N1-017]
gi|328467346|gb|EGF38426.1| hypothetical protein LM1816_00880 [Listeria monocytogenes 1816]
Length = 306
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|254437164|ref|ZP_05050658.1| RarD protein [Octadecabacter antarcticus 307]
gi|198252610|gb|EDY76924.1| RarD protein [Octadecabacter antarcticus 307]
Length = 295
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 78/294 (26%), Positives = 145/294 (49%), Gaps = 1/294 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
K + T+ G F AY+LWG PLY + + + +EVI+HRVLWS+P ++
Sbjct: 2 KNPENQDTLRGFGFALSAYLLWGFLPLYLKAISHIPAIEVIAHRVLWSVPVAGLILIVLG 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S L L++PKA+ M +AT+++++WG +++A+ + + Y++ P+ SVFLG
Sbjct: 62 RT-SDLGRILRDPKALAMGCVTATLVSINWGVYVWAIAAERTLDGALGYYINPIFSVFLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ L E+LN LQ A L ++ ++T +G + K
Sbjct: 121 AMLLGEKLNKLQWAAVGLAASAVGVLTYANGSLPWPALALTISWGFYAYFKRSLPIGPNQ 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F+ ++ P + G F+ D L+G G++ + +++ G K +
Sbjct: 181 GFLLEVLILSPVALGYLIWLGGQGGGHFVPLSMDMWLLMGCGIITAVPLMLYANGAKGLR 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
L+T+GIM+Y AP ++++ +VF+ ++P + R I F ++ A+ +Y
Sbjct: 241 LATIGIMQYIAPTMIMLIAVFVFEEPFGSARAIAFPMIWAALGLYTFAMFRGRK 294
>gi|71065741|ref|YP_264468.1| DMT superfamily efflux pump, RarD [Psychrobacter arcticus 273-4]
gi|71038726|gb|AAZ19034.1| DMT superfamily efflux pump, RarD [Psychrobacter arcticus 273-4]
Length = 319
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 69/297 (23%), Positives = 135/297 (45%), Gaps = 3/297 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G + A+ +WG PLY + L + E+I HR++W+ + +V
Sbjct: 15 KTTRHGIVTALIAFFIWGTFPLYFKQLSDYNATEIIGHRIVWTFTCLLIVLVVTKR-WQW 73
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ KNP+ + S I+A++W +++A+ Q S YF+ P++ V L + K
Sbjct: 74 IDTLKKNPRWIAYTFISGIIIAINWLTYVWAVNHDQILEASLGYFIGPLVGVGLSMILFK 133
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ +A +LS++I + + +P +SL +A ++S Y ++ P+ + + F+E
Sbjct: 134 ERLRTLQWVAIGFALLSVVIQVVIIGSLPWISLILAFSFSTYGTIQRQTPLTAVDAMFVE 193
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L L + + + + F L+ G + +F+ K S +
Sbjct: 194 TAMLLPIFLAWFWQSDVASSDISFWFTPSIW-LLMLAGPITLIPLLMFNKSTKLVAYSLL 252
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
M Y P + +VF +P D R VFG++ + ++++ + + + K +
Sbjct: 253 SFMNYLTPTFIFFLAVFYYNEPFDLHRLAVFGLIWLGLLLFSIDLWRHRPSKQLKAA 309
>gi|301167519|emb|CBW27102.1| putative chloramphenicol resistance membrane protein [Bacteriovorax
marinus SJ]
Length = 294
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 2/293 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L ++ WG+ +Y + L E++ HR+ W + F L+
Sbjct: 3 LGYLAGIFSFFFWGLIAIYWKQLSFFDSYELLGHRIFWGVLTFLLY-FLFKRPWGALRSC 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P+ +L S ++ +W F++A+ T S YF+ P+++V LG LKE L
Sbjct: 62 IDTPRKRKLLGVSTILIFTNWFVFVWAVGTGHVLEASIGYFINPLVNVALGVFVLKETLR 121
Query: 145 HLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A + L LL+ G +SL +A+++ Y RK + + S EG F+EM +
Sbjct: 122 AKQKLAVFIAFLGLLVFLSSGVGRIDVSLFLALSFGTYGLVRKKMNIPSMEGLFLEMLIS 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
IP L + + ++ FF + + G+ F+Y +K L++VG+++
Sbjct: 182 LIPILIFFGYRFYTSEISFFKASSYEMFMASLAGIATLIPLVSFNYAVKNISLTSVGLLQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
Y AP L + +VFI + F ++ A+++Y V+ S + +
Sbjct: 242 YIAPTLQFILAVFIYGELFTITHAYAFSLIWCALIIYTFDLVLFSRMQRISNA 294
>gi|313634242|gb|EFS00874.1| protein RarD [Listeria seeligeri FSL N1-067]
Length = 308
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R+LWS + F IV
Sbjct: 1 MENKQNGQLGGIMAGALAYVFWGVLPIYWKLVTNVPPMEILAYRILWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFEETKAILLKPKTLIAIIVAAFLVTGNWFLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K +PV
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKLVPVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVLFFATNGLMQYPSNTNIIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + V ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLAIGVLLFKESFDHIQLFAFAFIWLALIIFTISHVYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|289434059|ref|YP_003463931.1| RarD protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289170303|emb|CBH26843.1| RarD protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313638872|gb|EFS03927.1| protein RarD [Listeria seeligeri FSL S4-171]
Length = 308
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R+LWS + F IV
Sbjct: 1 MENKQNGQLGGIMAGALAYVFWGVLPIYWKLVTNVPPMEILAYRILWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFEETKAILLKPKTLIAIIVAAFLVTGNWFLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K +PV
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKLVPVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVLFFATNGLMQYPSNTNIIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + V ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLAIGVLLFKESFDHIQLFAFAFIWLALIIFTISHVYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|127514250|ref|YP_001095447.1| transporter DMT superfamily protein [Shewanella loihica PV-4]
gi|126639545|gb|ABO25188.1| RarD protein, DMT superfamily transporter [Shewanella loihica PV-4]
Length = 308
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 1/297 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + + G +++LWG+ PLY QFL + E+++ R+L S+P + +
Sbjct: 1 MPSHTQVSAKGNALAIVSFLLWGLLPLYYQFLPGADITEMLAIRLLCSVPFMLLVFLLLG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L L N +V + ++ I+ V W F +AL Q S +F+ P+ ++ LG
Sbjct: 61 KPLPSLALLRTNLPSVALCALASLIMCVSWYSFTWALTHGQVLAASLGFFINPLFAIGLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA-YCFARKTIPVGSSE 194
+FLK+RL Q A LL L + M + + ++ A Y +K I S
Sbjct: 121 VLFLKDRLTVAQKWAVLLGTLGIGYMVMAYAQLPWLALLMGSFFALYGLCKKFIRFDSLT 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
IE +L A Y+ W +G L +G + F+ I+
Sbjct: 181 SVTIEAALLTPIAAGYLFWLSATGQSEALSSGTGTMLLYMGSAPVTLLPLIFFALAIRHT 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
LS VG+++Y P + + ++F+ + D+V+ + F ++ + +++ L + ++
Sbjct: 241 SLSMVGLLQYIEPTMHFLLAIFLFNETFDSVKAVSFALIWVGLLLCSLEALHGLWRS 297
>gi|16802837|ref|NP_464322.1| hypothetical protein lmo0795 [Listeria monocytogenes EGD-e]
gi|46907026|ref|YP_013415.1| RarD protein [Listeria monocytogenes serotype 4b str. F2365]
gi|217965115|ref|YP_002350793.1| RarD protein [Listeria monocytogenes HCC23]
gi|224501901|ref|ZP_03670208.1| RarD protein [Listeria monocytogenes FSL R2-561]
gi|254931176|ref|ZP_05264535.1| rarD protein [Listeria monocytogenes HPB2262]
gi|16410184|emb|CAC98873.1| lmo0795 [Listeria monocytogenes EGD-e]
gi|46880292|gb|AAT03592.1| rarD protein [Listeria monocytogenes serotype 4b str. F2365]
gi|217334385|gb|ACK40179.1| RarD protein [Listeria monocytogenes HCC23]
gi|293582723|gb|EFF94755.1| rarD protein [Listeria monocytogenes HPB2262]
gi|307570325|emb|CAR83504.1| rarD protein [Listeria monocytogenes L99]
gi|332311200|gb|EGJ24295.1| RarD protein [Listeria monocytogenes str. Scott A]
Length = 306
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 152/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIIL---VGAGVVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHMQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|308173912|ref|YP_003920617.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
gi|307606776|emb|CBI43147.1| putative integral inner membrane protein [Bacillus
amyloliquefaciens DSM 7]
gi|328553162|gb|AEB23654.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208]
gi|328912064|gb|AEB63660.1| putative integral inner membrane protein [Bacillus
amyloliquefaciens LL3]
Length = 298
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 62/296 (20%), Positives = 133/296 (44%), Gaps = 3/296 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ C++ +WG+ P+Y + LE + L++++HR+LWS + + +
Sbjct: 4 NTARKGIIYTACSFAMWGLFPVYWKLLEHIPALDILAHRILWSFVFMCVLLTVLKKWKTG 63
Query: 81 LKDTLKNPKAVGM--LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ G+ L F++ +++V+W +I+A+ S Y++ P++SV LG +F
Sbjct: 64 WRELRLLKSEGGLLALFFASVLISVNWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILF 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE+LN +Q A + +++I G + +A+ + +S + S +
Sbjct: 124 LKEKLNRMQAAAVSIAGAAVIISAFQYG-AVPYIALLLAFSFGLYGLCKKRTRMSSMIGL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L I + + G L G+ + +F+ G KR L
Sbjct: 183 TLETLLITPAALIYLGYTADGNASGSLGAGTWTLLFFAGVFTALPLLMFAEGAKRLPLYQ 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
VGI++Y +P + ++ VF+ +P + F + A++++ + K++
Sbjct: 243 VGILQYISPTITLMLGVFVYHEPFSGQKAFTFICIWAALLLFTFSQIKWKRPLKSR 298
>gi|326771730|ref|ZP_08231015.1| hypothetical protein HMPREF0059_00108 [Actinomyces viscosus C505]
gi|326637863|gb|EGE38764.1| hypothetical protein HMPREF0059_00108 [Actinomyces viscosus C505]
Length = 330
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 6/309 (1%)
Query: 2 GKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVL 61
G AT + + + G V Y LWG+ PLY L +E+I HR+L
Sbjct: 13 GPTATPPALPEAAATSASGTLDSTGMALVIGCYTLWGVFPLYFHLLSAAGSVEIIGHRIL 72
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
W+L ++ + L +++P+ +GML +++V+W ++Y + + + +
Sbjct: 73 WTLVS-CLTLIALRRRWAQLVHVVRSPRLLGMLAVCGLLVSVNWLVYVYGVNSARTADAA 131
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY 181
YF+ P+++V L S+ L ERL ++ L + ++ + G A
Sbjct: 132 LGYFINPLVTVALASLVLHERLRPAHRVSIALASAGVALLVVLQGSLPWISLALAFSFAL 191
Query: 182 CFARKTI---PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--Y 236
K V + G +E V+ AL Y+ + G + + + +
Sbjct: 192 YGLVKKQLGPDVDALTGLTVESAVVTPAALAYLGHLAWQGQSAWQAPDQGWWILALLVVA 251
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
G + + +F+ G +R LS VG+ +Y AP + + + + I R +V A
Sbjct: 252 GPVTAVPLLLFAAGTRRVPLSVVGMGQYIAPTIQFLLAWGAFHERIPPARWAAMILVWAA 311
Query: 297 MVVYLLPTV 305
+ V++ V
Sbjct: 312 VAVFIGDAV 320
>gi|183600126|ref|ZP_02961619.1| hypothetical protein PROSTU_03661 [Providencia stuartii ATCC 25827]
gi|188022414|gb|EDU60454.1| hypothetical protein PROSTU_03661 [Providencia stuartii ATCC 25827]
Length = 305
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G +YILWGITPL+ + L LE+++ RV+WS+P + + +L +
Sbjct: 4 RSGVALAIFSYILWGITPLFYRLLPGAEPLELLAQRVIWSIPFLLAIRLLIK-NKTLWQQ 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +++ + +FS++I+A+ WG F YAL Q S YF+ P+ S+ LG VFL ERL
Sbjct: 63 VWADKRSIILCLFSSSIMAISWGAFTYALTHGQVLAASLGYFINPLFSILLGVVFLHERL 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +A LLI + G PLL+L + ++ Y RK I F+E
Sbjct: 123 VLAEKMAVLLIFSGVCFQIWQYGELPLLALVMGSAFAVYGLIRKFIRFDVITSLFVEAMW 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L A+ W +G G+ L + + F+ IKR L+ +G+
Sbjct: 183 LLPVAIGITWWLSANGTSAVEAGDWQIKLLYMLAAPVTIIPLLFFTAAIKRTTLTVIGLA 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+Y P + + +VF+ + D V+ + F ++ + ++ ++ +
Sbjct: 243 QYIEPTIQFLLAVFLFNELFDWVKGVSFSLIWLGLLCCIIALLHKR 288
>gi|227833469|ref|YP_002835176.1| putative RarD protein [Corynebacterium aurimucosum ATCC 700975]
gi|262184457|ref|ZP_06043878.1| putative RarD protein [Corynebacterium aurimucosum ATCC 700975]
gi|227454485|gb|ACP33238.1| putative RarD protein [Corynebacterium aurimucosum ATCC 700975]
Length = 298
Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 143/289 (49%), Gaps = 4/289 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ AY++WG P + L S E+++HR++W+ V ++ G L +L+
Sbjct: 1 MFYTIAAYLMWGFFPAFFPLLRPASPFEILAHRIVWTAVLVTAVLLVTGGWRELKAFSLR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + ++WG ++ A+ + + YF+ P++SV LG +FLKE+L
Sbjct: 61 TWGWMFAC---GVAITINWGTYVIAINSDHVADAALGYFINPLVSVALGIIFLKEKLTKA 117
Query: 147 QIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q+ + + +++L +T +G P SLA+A ++ Y +K I V S E V+
Sbjct: 118 QVASVSIAFIAVLWLTFMTGQAPYYSLALAFSFGIYGLLKKRITVSSMSSVAAETLVMLP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL Y+ + G F LI GL+ + F+ G K +LST+G+++Y
Sbjct: 178 FALIYLGYLQAQGVSTFTTEGPGHVALLITSGLVTALPLLCFAQGAKHLRLSTLGMLQYM 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P++ ++ ++F+ ++ + T R I F I+ +A+++YL V ++ +
Sbjct: 238 TPIMQMLWALFVTQEHMSTERWIGFAIIWVAVIIYLADLVRMGRASRRR 286
>gi|16799862|ref|NP_470130.1| hypothetical protein lin0788 [Listeria innocua Clip11262]
gi|16413239|emb|CAC96020.1| lin0788 [Listeria innocua Clip11262]
gi|313619923|gb|EFR91479.1| protein RarD [Listeria innocua FSL S4-378]
Length = 308
Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 76/302 (25%), Positives = 151/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVFWGVLPIYWKLATNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 GG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KTSMVFQETKDVLLKPKTLIAIIAAAFLVTGNWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AV++S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVSFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVLFFATNGLMQYAAQTNIIL---VGAGIVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|229173803|ref|ZP_04301343.1| chloramphenicol-sensitive RarD protein [Bacillus cereus MM3]
gi|228609653|gb|EEK66935.1| chloramphenicol-sensitive RarD protein [Bacillus cereus MM3]
Length = 300
Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 87/293 (29%), Positives = 164/293 (55%), Gaps = 5/293 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SLLK 82
G +F +YI+WGITP+Y + ++ VS E+++ RV WS + + + +K
Sbjct: 9 GIVFAVLSYIMWGITPIYWKLIQHVSSGEILAQRVFWSFIFMLVLLFFMKKWSTYVEFMK 68
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +KNPK V L+ ++ +++ +WG F++A+L + S ++ P+ S+ +G + LKE+
Sbjct: 69 EIVKNPKLVWSLIIASVLISSNWGIFMWAVLNGKILEASLGQYINPLTSMLIGVIALKEK 128
Query: 143 LNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ QI+A +L + +L +T H G IP +SL++A+T+ Y A+K I S G +E
Sbjct: 129 LSGSQILAFILAGIGVLTLTFHYGVIPWISLSLALTFGFYGLAKKMIKTDSVIGLTLETM 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V++ AL Y+ + + F ++ +L LIG G++ + +F+ K+ LS +GI
Sbjct: 189 VISPIALVYLTY-LMFQSQIQFFNSVSTSLLLIGSGIVTALPLLLFTKSAKKVSLSMLGI 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++Y +P L +++ VF+ + + I F + +A+V+Y ++ S K K
Sbjct: 248 LQYISPTLSLIAGVFLYNETLTKAHFIAFTFIWLALVIYTFSSITKSSKESKK 300
>gi|254788396|ref|YP_003075825.1| protein RarD [Teredinibacter turnerae T7901]
gi|237686532|gb|ACR13796.1| protein RarD [Teredinibacter turnerae T7901]
Length = 298
Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G LF AY WG PLY + ++ + E+ HR++WS+ ++
Sbjct: 1 MQSETAKGLLFAVGAYGCWGFVPLYFKAMDAIPEGEIFVHRIIWSVLFTGLVLIPLGRWK 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + + +A +A++W FI+A + TS Y++ P+I+V G +F
Sbjct: 61 NIWPHLCNLRTLLVLSA-AAVFIAINWIVFIWASNNDRLLDTSIGYYINPLINVLFGLLF 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E+L +Q ++ L ++L+ + G P++SL +A + Y RK + VG+ EG F
Sbjct: 120 LGEKLRRMQWVSVSLAAAAVLLQIITLGKLPVISLTLAFAFGFYGLMRKIVQVGALEGLF 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE +L P L Y W G + L+ G + S +F+ G+ R K S
Sbjct: 180 IETLLLLPPTLVYFGWFSEKLSFIEATGRPGFAVALMAAGPITSIPLLLFASGVSRLKYS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G ++Y AP ++ + ++F ++P+ + F ++ +A+ +Y + S
Sbjct: 240 TIGFIQYLAPSIVFLLAIFWFREPLVWQMAVTFALIWVALAIYSYDGLRRSR 291
>gi|262275512|ref|ZP_06053322.1| predicted permease [Grimontia hollisae CIP 101886]
gi|262220757|gb|EEY72072.1| predicted permease [Grimontia hollisae CIP 101886]
Length = 299
Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 1/290 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
PT G + A++LWG PLY QFL ++ E+++ R+L SLP + +
Sbjct: 2 NPTRFGNVMAAVAFLLWGAMPLYYQFLPNAAMDELLALRILASLPFLLLVLQVRKATSPN 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++ ++ ++ + W F +A+ + S YF+ P++ + LG V
Sbjct: 62 WSALVADKRSFFFAGLASVMMCISWSAFTWAMTNDRVLDASLGYFINPLLVIALGVVAFN 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L Q A L L L G P+ +L +AV ++ Y + ++ + + +E
Sbjct: 122 ETLTLGQKAAVLFGALGLSYQIWQYGELPVAALLMAVFFALYGWCKRHVKYDAISSLLVE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L A Y+ + G G++ L +G + FS +K A++S +
Sbjct: 182 TIALLPVAAIYMAYKIGIGTSVAVSGDMSTLLLYLGAAPVTLLPLFFFSEAVKYAQMSMI 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G M+Y P L V ++ + + D V+T+ FG++ + + + ++ +++
Sbjct: 242 GFMQYIEPSLQFVLAIAVFGEAFDGVKTVSFGLIWLGLAISIIESLVKVK 291
>gi|229080352|ref|ZP_04212877.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock4-2]
gi|228703021|gb|EEL55482.1| chloramphenicol-sensitive RarD protein [Bacillus cereus Rock4-2]
Length = 300
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 87/293 (29%), Positives = 164/293 (55%), Gaps = 5/293 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SLLK 82
G +F +YI+WGITP+Y + ++ VS E+++ RV WS + + + +K
Sbjct: 9 GIVFAVLSYIMWGITPIYWKLIQHVSSGEILAQRVFWSFIFMLVLLFFMKKWSTYVEFMK 68
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +KNPK V L+ ++ +++ +WG F++A+L + S ++ P+ S+ +G + LKE+
Sbjct: 69 EIVKNPKLVWSLIIASVLISSNWGIFMWAVLNGKILEASLGQYINPLTSMLIGVIALKEK 128
Query: 143 LNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ QI+A +L + +L +T H G IP +SL++A+T+ Y A+K I S G +E
Sbjct: 129 LSGSQILAFILAGIGVLTLTFHYGVIPWISLSLALTFGFYGLAKKMIKTDSVIGLTLETM 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V++ AL Y+ + + F ++ +L LIG G++ + +F+ K+ LS +GI
Sbjct: 189 VISPIALVYLTY-LMFQSQIQFFNSVSTSLLLIGSGIVTALPLLLFTKCAKKVSLSMLGI 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++Y +P L +++ VF+ + + I F + +A+V+Y ++ S K K
Sbjct: 248 LQYISPTLSLIAGVFLYNETLTKAHFIAFTFIWLALVIYTFSSITKSSKESKK 300
>gi|254524624|ref|ZP_05136679.1| RarD protein [Stenotrophomonas sp. SKA14]
gi|219722215|gb|EED40740.1| RarD protein [Stenotrophomonas sp. SKA14]
Length = 299
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 86/295 (29%), Positives = 148/295 (50%), Gaps = 3/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L +++WG+ P+Y L +V ++I+HR++WS V ++ S L
Sbjct: 6 KEQRRGLLVTASTFVIWGLVPVYWHLLNEVPSFQIIAHRIIWSTVMVLGWLLISSR-LGW 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K P+A+ +L+ S+ +A +WG +I+A+ TS YF+ P+++V LG + LK
Sbjct: 65 WKKIAAQPRALPILLVSSLTIAFNWGLYIWAVNAGHVIETSLGYFINPLVNVLLGVLVLK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ +A + + + +T+ +G P ++L +A ++ Y RK + V G +E
Sbjct: 125 ERLRRLQWVAVAMAAVGVAWLTIDAGTPPWIALGLACSFGLYGLLRKLVSVDPVAGLGVE 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKLST 258
L +PAL + +W G FF G L+ G + + F+YG+KR LS
Sbjct: 185 SLYLFLPALAFAIWAENGHGGAFFHGWGWRNDLLLIFGGAVTAVPLIGFAYGVKRIPLSL 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
VGI++Y AP L ++ VF + DT + I F + +V+++ + K
Sbjct: 245 VGILQYIAPSLQLLLGVFFFHEGFDTGKAIGFAAIWAGLVLFVGDNIRTMRAAKR 299
>gi|57641732|ref|YP_184210.1| DMT family permease [Thermococcus kodakarensis KOD1]
gi|57160056|dbj|BAD85986.1| permease, drug/metabolite transporter (DMT) superfamily
[Thermococcus kodakarensis KOD1]
Length = 287
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 101/279 (36%), Gaps = 9/279 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G LFVF A +WG ++ ++L+ ++ +RV+++L + I G S+
Sbjct: 2 KKGYLFVFLAASMWGTLGIFAKYLDGFGLTPFTMVFYRVVFALLLLGAYIKLKGIGFSIE 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L+ ++ + + + + Y + + P+ S+ LG + E
Sbjct: 62 RSRLR-----FYALYGFFSIFLFYTLYFYTVTISSVSFAVLLLYTAPMYSIILGRLIFNE 116
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ ++ A +++ L + + ++ S V F + + E
Sbjct: 117 KITKEKLTALVMVTLGV--LFVNGSGASFSTKALVFGLLSGFTYALYGILAKFAVRKEEP 174
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A+ + F + + ++++ +K ++S I
Sbjct: 175 EKALFYTLLFGMIFLAPFSDFSVPTGAIPYLFALALFPTFLGYVLYNHALKEVEVSRASI 234
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P++ I + + + + V+ + +++ +V
Sbjct: 235 VATVEPVVAIFLAFLLFGEKLSLVQLLGAALIIGGSIVV 273
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 43/138 (31%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+A + G F + + AL + G F + +
Sbjct: 9 FLAASMWGTLGIFAKYLDGFGLTPFTMVFYRVVFALLLLGAYIKLKGIGFSIERSRLRFY 68
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ + ++ Y + + +S ++ YTAP+ I+ I + I + +
Sbjct: 69 ALYGFFSIFLFYTLYFYTVTISSVSFAVLLLYTAPMYSIILGRLIFNEKITKEKLTALVM 128
Query: 293 VVIAMVVYLLPTVINSGK 310
V + ++ S K
Sbjct: 129 VTLGVLFVNGSGASFSTK 146
>gi|242372461|ref|ZP_04818035.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis M23864:W1]
gi|242349803|gb|EES41404.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis M23864:W1]
Length = 300
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 69/302 (22%), Positives = 140/302 (46%), Gaps = 7/302 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G F AY+LWGI P+Y + + + E+++ R+++S+ + ++
Sbjct: 1 MASEYKKGIFFALGAYVLWGILPMYWELINHIGAFEILAFRIIFSMIFMILVLIVGRNQR 60
Query: 79 SLLKDTLKNPKAVGML----VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + + ++ ++WG FI+A+ +S Y++ P++S+ L
Sbjct: 61 QAFIRDVNQLFSHPIQLIAIIVAGYVITINWGTFIWAVTNGHVLQSSLGYYINPLVSIVL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A + ++ +L MT+ G P +S+ +A+++ Y +K + + +
Sbjct: 121 ALIFLKERFNKFEWLAIIFALIGVLYMTIKIGEFPFVSIMLALSFGVYGLLKKVVHIDAI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
IE V A + YV++ F L G + +FS G KR
Sbjct: 181 SSIAIECIVTAPAGIIYVIYLWQQHHMTFGFNMSSFWLIFSGAVT--AIPLILFSAGAKR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
LS G ++Y P +M + +F+ K+ D + I F + I +++Y + +N +N
Sbjct: 239 IPLSLTGFIQYVGPTIMFILGIFVFKEKFDINQLITFIFIWIGIILYSISQYMNIKRNPI 298
Query: 314 KK 315
K
Sbjct: 299 AK 300
>gi|255994481|ref|ZP_05427616.1| protein RarD [Eubacterium saphenum ATCC 49989]
gi|255993194|gb|EEU03283.1| protein RarD [Eubacterium saphenum ATCC 49989]
Length = 307
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/297 (19%), Positives = 123/297 (41%), Gaps = 2/297 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + G A WGI PLY L+ + + ++R ++++ + +IV
Sbjct: 1 MIIRKSESKYRRGLFAALLAMSAWGILPLYWNLLDDIPYNIITAYR-VFTMGLIVCSIVP 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + LK+ K + ++V + ++ +W +I+A+ Q TS Y++ P+
Sbjct: 60 LGYPMKDIVAPLKDRKQLALMVSAGVLITFNWSTYIWAVNNGQILQTSLGYYIEPLFVCA 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV-GS 192
LGS+ KE + +I+A +LI+ ++ I A A K +
Sbjct: 120 LGSLIFKEVFHIHKILAICFAAAGVLILLVYFHELPKVALILPITFATYAALKKKVKASA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ E L + Y+V G ++ + L+ G + +F+ G K
Sbjct: 180 VISLYYENIFLMPIVIAYIVHRELVGNGALAAVDLKIYILLLFSGFVTFVPLALFAVGAK 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
L T+GI Y +P + + + +L + ++ V I F ++ + ++++ ++
Sbjct: 240 NLPLVTLGITGYLSPTITFLIGILVLHENLNKVLLIAFLVIWVGLIIFTRGEILEHR 296
>gi|237654333|ref|YP_002890647.1| RarD protein, DMT superfamily transporter [Thauera sp. MZ1T]
gi|237625580|gb|ACR02270.1| RarD protein, DMT superfamily transporter [Thauera sp. MZ1T]
Length = 320
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 4/285 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS--GGLSLL 81
G A++ WG+ PLY + L V E+++HRVLWS + + GG +
Sbjct: 26 RQGMFAALAAFVTWGLAPLYFRALGSVPPFEIVAHRVLWSALLLALMLATLRFTGGFERV 85
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L+ P+ + +L ++ + + +W FI+A+ + S YF+ P++SV LG++FL E
Sbjct: 86 GAVLRQPRLLALLALTSLLTSSNWLVFIWAIDAGRLLEASLGYFINPLVSVALGAIFLGE 145
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL LQ A + + G P + L +A T+ Y RK PV + G FIE
Sbjct: 146 RLRPLQAAAVGIACAGVAWRVWQLGSLPWIPLFLAGTFGLYGLLRKRAPVDAVGGLFIET 205
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+A AL +++W G F GN + L G++ + +F+ G +R L+TVG
Sbjct: 206 LVVAPLALAWLLWLHAQGSLAFGSGNPAEW-LLPLTGVITAIPLMLFAVGARRLPLATVG 264
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++Y AP L + +V + ++P DT + + F ++ +A+ VY V
Sbjct: 265 FLQYIAPSLNFLVAVLLFREPFDTTQLVGFALIWLALAVYSADMV 309
>gi|313624582|gb|EFR94564.1| protein RarD [Listeria innocua FSL J1-023]
Length = 308
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 76/302 (25%), Positives = 151/302 (50%), Gaps = 7/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVFWGVLPIYWKLATNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 GG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KTSMVFQETKDVLLKPKTLIAIIAAAFLVTGNWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AV++S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVSFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E ++ AL YV++ +G + +G G++ + +F+
Sbjct: 181 VWTGLTLETMIITPFALIYVLFFATNGLMQYAAQTNIIL---VGAGIVTAIPLLLFATAA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K+ + VG ++Y P LM+ V + K+ D ++ F + +A++++ + + ++ K
Sbjct: 238 KKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAFMFIWLALIIFTISHIYSAAKI 297
Query: 312 KT 313
K
Sbjct: 298 KQ 299
>gi|218682446|ref|ZP_03530047.1| RarD protein, DMT superfamily transporter [Rhizobium etli CIAT 894]
Length = 305
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 95/289 (32%), Positives = 170/289 (58%), Gaps = 3/289 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P+Y + + + EVI+HR++WSLP ++ + +
Sbjct: 15 SPRGFAFALTAYLLWGFLPIYMKAVAHIPPAEVIAHRIVWSLPLAGIVLIVLGRT-NDIA 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A+++ V+WG +++A+ + YF+ P+ S+FLG+V LKE+
Sbjct: 74 TALRSPRMLAMAALTASLITVNWGTYVWAIGAGHSLDAALGYFINPLFSIFLGAVLLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A L L++ I+ GIP ++L +A++W Y RKT+P+G ++GFF+E+
Sbjct: 134 LQPLQIAAIALAALAVAILAFDSGGIPWVALTLAISWGFYALFRKTLPLGPNQGFFLEVL 193
Query: 202 VLAIPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L+ PAL Y+++ F G+ + + DT L+G G++ + I++ G K KLST+G
Sbjct: 194 ILSGPALIYILYLEFGSGQGHLYRTGLADTSLLLGCGVITAVPLMIYANGAKLLKLSTIG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IM+Y AP ++ + +VF+ ++P+ T R I F ++ + +Y + S
Sbjct: 254 IMQYIAPTMIFLIAVFVFQEPLGTARMIAFALIWAGLFLYSWSMLKGSR 302
>gi|227356548|ref|ZP_03840935.1| DMT superfamily drug/metabolite transporter [Proteus mirabilis ATCC
29906]
gi|227163304|gb|EEI48231.1| DMT superfamily drug/metabolite transporter [Proteus mirabilis ATCC
29906]
Length = 327
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 2/284 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L C+YILWGITPL+ + L LE+++ R++WS+P + + F + + L
Sbjct: 30 GVLLAICSYILWGITPLFYRLLPGAQPLELLAQRLIWSIP-LLLLVRLFIKNRTRWRAVL 88
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ +++ M +FS+ +AV W F YAL +Q S YF+ P+ S+ LG +FLKE+LN
Sbjct: 89 QDRRSIFMCLFSSLAMAVSWCTFTYALTHQQVLAASLGYFINPLFSIVLGVIFLKEKLNP 148
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +A +LI + G P+L+L + ++ Y RK I FIE L
Sbjct: 149 AEKLAVILICAGVGYQLWMYGQLPILALVMGGAFAIYGLIRKFIRFDVITSLFIETLWLI 208
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ ++W F + + I + F+ IKR L+ +G+ +Y
Sbjct: 209 PVAIGVMIWLIMRDESAFSSADNLTRFYYILTAPVTILPLLFFTAAIKRTTLTVIGLAQY 268
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P + + +VF+ + D V+ + F ++ + ++ + +
Sbjct: 269 IEPTMQFLLAVFLFHEAFDAVKGVSFSLIWLGLLCCIFALIRKR 312
>gi|311033186|ref|ZP_07711276.1| transporter DMT superfamily protein [Bacillus sp. m3-13]
Length = 313
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 71/306 (23%), Positives = 154/306 (50%), Gaps = 6/306 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ + +G + +YILWGI PL+ + +++V E+++HR++WSL + +
Sbjct: 1 MNQTTGNKEFAVGIVSAGLSYILWGILPLFWKLVDEVPAGEILAHRIVWSLVFMLVILAC 60
Query: 74 FSG---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
S LK ++N K + + ++ ++++WG +I+A+ + S Y++ P++
Sbjct: 61 LRKISSFTSELKALVRNRKRLIGISLASIFISINWGLYIWAVNADRIIEASLGYYINPLV 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIP 189
S+ L + LKE+L+ LQ I+ +L +L++T G P +++ +A++++ Y +K +
Sbjct: 121 SILLAVIVLKEKLSFLQTISIILAGAGVLVLTFSFGTFPWVAIMLALSFAFYGLIKKMVQ 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT--LFLIGYGLLNSFVFCIF 247
VG+ G IE ++ AL ++ + G L+ G++ + +F
Sbjct: 181 VGALVGLAIETLLITPFALLFLGYVHAGGSGGGGAFGGDLGVTFLLLLAGVVTAVPLLLF 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ G KR LS VG+++Y AP + ++ V++ +P + F + A+ +Y +
Sbjct: 241 ASGTKRIPLSMVGLLQYFAPTIKLIMGVYLFHEPFTNAHLVAFVCIWGALGIYTFTLMRG 300
Query: 308 SGKNKT 313
+
Sbjct: 301 WKLKRA 306
>gi|241764113|ref|ZP_04762150.1| RarD protein, DMT superfamily transporter [Acidovorax delafieldii
2AN]
gi|241366577|gb|EER61065.1| RarD protein, DMT superfamily transporter [Acidovorax delafieldii
2AN]
Length = 292
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 37 WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
WG+ PLY + + V LEV+ HR +WSL V ++ ++ P+ +G
Sbjct: 15 WGLFPLYFRQVAHVPALEVVVHRTVWSLAFV-LVVLAVRRQWGWMRALWSQPRVLGAFAA 73
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
SA +L+ +W +++A+ S YF+ P+++V LG VFL ER Q +A L
Sbjct: 74 SALLLSGNWLTYVWAVQNHHVVDASLGYFILPLVNVALGFVFLHERPRPGQWLAVALAAG 133
Query: 157 SLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
+L + + +P ++L +A+++ Y RK +G+ EG +E +LA AL +
Sbjct: 134 GVLWLAVQAGSVPWIALVLALSFGFYGLMRKVATLGALEGLTLETMMLAPVALAVLGVWS 193
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
G G+ +L+ G L + +F+ G +R L+T+GI++Y +P L +
Sbjct: 194 AQGQGALVQGDASTVAWLLVAGPLTAVPLLLFAAGARRIPLATMGILQYISPSLQFALGI 253
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ +P R + F ++ A++VY +
Sbjct: 254 WLFHEPFQPARLLGFVLIWAALLVYSVEGWRAR 286
>gi|28867713|ref|NP_790332.1| rarD protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967746|ref|ZP_03395893.1| rarD protein [Pseudomonas syringae pv. tomato T1]
gi|301382383|ref|ZP_07230801.1| rarD protein [Pseudomonas syringae pv. tomato Max13]
gi|302062346|ref|ZP_07253887.1| rarD protein [Pseudomonas syringae pv. tomato K40]
gi|302130664|ref|ZP_07256654.1| rarD protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28850948|gb|AAO54027.1| rarD protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213927522|gb|EEB61070.1| rarD protein [Pseudomonas syringae pv. tomato T1]
gi|331015030|gb|EGH95086.1| rarD protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 295
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 73/295 (24%), Positives = 139/295 (47%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG+ PLY + + V +E+I HR LWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLFPLYFKAIAAVPAIEIIIHRALWSALFGLIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A +L + H +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQWVAVVLAATGVAQQVWHVGSLPWISLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVTAQAEFWTTTQAIWLAAAGPVTLIPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+G ++Y AP L+++ +V + + + T I F + + VY + + S +
Sbjct: 241 TLGFLQYIAPTLVLLLAVLLYGEHLTTSTIITFAFIWAGLAVYSVDIWLKSRGRR 295
>gi|314935321|ref|ZP_07842674.1| protein RarD [Staphylococcus hominis subsp. hominis C80]
gi|313656656|gb|EFS20395.1| protein RarD [Staphylococcus hominis subsp. hominis C80]
Length = 301
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 74/294 (25%), Positives = 145/294 (49%), Gaps = 6/294 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G LF A++LWGI P+Y +F+ +S E++++R++ ++ + I +L D
Sbjct: 8 KKGILFALGAHLLWGILPIYWRFIYGISAFEILAYRIILAMVFMILMIFVLKKSQALKHD 67
Query: 84 TLK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +P + ++ + ++ ++WG FI+A+ TS Y++ P++SV L +FLK
Sbjct: 68 INQLVAHPIQLVAIIIAGYVITINWGTFIWAVSNGHVLQTSLGYYINPLVSVLLAFIFLK 127
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER N + +A + + ++ MT+ G P++SL +A ++ Y +K + V + G IE
Sbjct: 128 ERFNTFETLAIVSAAIGVIYMTMKIGEFPIISLMLAFSFGIYGLLKKLVRVEAMSGIAIE 187
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V A L Y+++ + L L G + +FS G +R LS
Sbjct: 188 CIVTAPAGLIYIIYLWQAHQSSVGLNMSTFLLLFSGAVT--AVPLILFSAGARRIPLSLT 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G ++Y +P ++ + +F+ K+ D + I F + I + +Y + I ++
Sbjct: 246 GFIQYVSPTIIFLLGIFVFKEKFDIHQFITFIFIWIGIALYSISQYIKMKRSPR 299
>gi|326315658|ref|YP_004233330.1| RarD protein, DMT superfamily transporter [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372494|gb|ADX44763.1| RarD protein, DMT superfamily transporter [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 292
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L+ AY+ WGI P+Y + V LEV+ HR LWS+ + ++ L+ +
Sbjct: 4 GILYATLAYVAWGIFPVYFHQVASVPALEVVLHRTLWSMV-LLAVVLAARRQLAWVAALR 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P+ V + SA +L+ +W +++A+ + S YF+ P+++V +G FL ER
Sbjct: 63 RQPRVVAAFLLSALLLSANWLIYVWAVHNQHVVDASLGYFILPLVNVAMGYAFLHERPRP 122
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A + +L +T+ +G P ++L +A+T+ Y RKT +G+ EG +E +LA
Sbjct: 123 GQWLALAVAAAGVLWLTVQAGRLPWIALVLALTFGFYGLLRKTAVLGAMEGLALETALLA 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ + W G++G + + +L+ G + + +F+ G +R L+T+G+++Y
Sbjct: 183 PLAVGGLAWLGWTGQAAWLNADAATLGWLVAAGPITAIPLLLFAAGARRIPLATMGVLQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+P L V++ + + R F ++ A+V+Y L + +
Sbjct: 243 ISPSLQFALGVWLFGEQVQPARLAGFVLIWAALVLYTLEGTVLRRR 288
>gi|289624793|ref|ZP_06457747.1| rarD protein [Pseudomonas syringae pv. aesculi str. NCPPB3681]
Length = 295
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 70/294 (23%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG+ P+Y + + V +E+I HRVLWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLFPIYFKAISAVPAIEIIIHRVLWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + + +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFATIGVAQQVWNVGSLPWVSLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVSAQPEFWTTTQAIWLAAAGPVTLIPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYLAPTLVLLLAVLLYGEHLTTSTIITFAFIWAGLAIYSVDIWLKSRSR 294
>gi|241203916|ref|YP_002975012.1| RarD protein, DMT superfamily transporter [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240857806|gb|ACS55473.1| RarD protein, DMT superfamily transporter [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 304
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 99/289 (34%), Positives = 170/289 (58%), Gaps = 3/289 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P+Y + + +S EVI+HR++WSLP ++ ++
Sbjct: 15 SPRGFAFALTAYLLWGFLPIYMKAVAHISPAEVIAHRIVWSLPLAGIVLIVLGRT-QDIR 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L +P+ + M +A+++ V+WG +++A+ + YF+ P+ S+FLG+VFLKE+
Sbjct: 74 AALSSPRMLAMAALTASLITVNWGTYVWAIGAGHSLDAALGYFINPLFSIFLGAVFLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A L L++ I+ L GIP ++L +AV+W Y RKT+P+G ++GFF+E+
Sbjct: 134 LQPLQIAAIALAALAVAILALDSGGIPWVALTLAVSWGFYALLRKTLPLGPNQGFFLEVL 193
Query: 202 VLAIPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L+ PAL Y+++ F G+ + + DT L+G G++ + I++ G K KLST+G
Sbjct: 194 ILSGPALLYILYLEFGSGQGHLYRTGLADTTLLLGCGVITAVPLMIYANGAKLLKLSTIG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IM+Y AP ++ + +VF+ +P T R I F ++ + +Y + S
Sbjct: 254 IMQYIAPTMIFLIAVFVFHEPFGTARMIAFPLIWAGLFLYSWSMLKGSR 302
>gi|319941114|ref|ZP_08015450.1| RarD protein [Sutterella wadsworthensis 3_1_45B]
gi|319805471|gb|EFW02273.1| RarD protein [Sutterella wadsworthensis 3_1_45B]
Length = 300
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 86/288 (29%), Positives = 152/288 (52%), Gaps = 2/288 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L F AY LWG+ P Y L+ + LE+++HR++WSL + +V + LK L
Sbjct: 4 GILATFAAYFLWGLFPFYFHALQGIGALEILAHRIIWSLVFITIVVVAMRRT-AWLKGAL 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
PK +G+ SA I+ +WG ++YA+++ + S YF+ P++S+ LGS FL+ERL
Sbjct: 63 MTPKVLGVFCLSALIIGANWGIYVYAIVSGRTIEASLGYFINPLVSIALGSFFLRERLRR 122
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q A +L + +L +T +G+ P L L +AVT+ Y RK P+GS EG +E +L
Sbjct: 123 PQQAAVVLAGIGVLWITWTTGVAPWLGLMLAVTFGLYGLIRKIAPLGSLEGMVLESLLLT 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A ++ + F ++ + LI G + + F+ G++R ST +++Y
Sbjct: 183 PAAAAWLWFLWSDHELAFISADLTTQILLIAAGPVTAVPLLFFASGVRRIPYSTSAVIQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+P ++ + VF +P + F I+ A+ ++L ++ + + +
Sbjct: 243 VSPTMVFLIGVFAFGEPFSKGMLVGFLIIWAAVALFLGEMLLFARRCR 290
>gi|320533279|ref|ZP_08033981.1| protein RarD [Actinomyces sp. oral taxon 171 str. F0337]
gi|320134505|gb|EFW26751.1| protein RarD [Actinomyces sp. oral taxon 171 str. F0337]
Length = 346
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 6/287 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G V Y LWG+ PLY + L +E+I HR+ W+L A++ L +
Sbjct: 36 GMALVIGCYSLWGVFPLYFRLLSAAGSVEIIGHRIAWTLVS-CLALIALRHRWVTLARVV 94
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P+ +GML +++V+W ++Y + T + + YF+ P+++V L S+ L ERL
Sbjct: 95 RTPRLLGMLAVCGLLVSVNWLVYVYGVNTARTADAALGYFINPLVTVALASLVLHERLRP 154
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGSSEGFFIEMCV 202
++ L + ++ + G A R V + G +E V
Sbjct: 155 AHQVSIALAGAGVALLVVLQGSLPWISLALAFSFALYGLVKKRIGPDVDALTGLTVESAV 214
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKRAKLSTVG 260
+A AL Y+ + G + + + + G + + +F+ G +R LS VG
Sbjct: 215 VAPLALAYMGHLAWQGQSAWQAPDQGWQILALLVVAGPVTAVPLLLFAAGTRRVPLSVVG 274
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ +Y AP + + + + I R +V A+ V++ V
Sbjct: 275 MGQYIAPTIQFLLAWGAFHEQIPPARWAAMVLVWAAVAVFIGDAVRQ 321
>gi|110678454|ref|YP_681461.1| rarD protein, putative [Roseobacter denitrificans OCh 114]
gi|109454570|gb|ABG30775.1| rarD protein, putative [Roseobacter denitrificans OCh 114]
Length = 298
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 89/299 (29%), Positives = 177/299 (59%), Gaps = 2/299 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++A T G F AY LWG P+Y + L +V+ LEV++HRV+WS+P +V
Sbjct: 1 MKSAHADTPQGFAFAMSAYFLWGFLPIYMKALAEVTPLEVLAHRVVWSIPIAAIVLVALG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ L +P+ + M +A +++ +WG +I+++ + + + Y++ P+ SVFLG
Sbjct: 61 RT-KDLRAALMSPRTLAMGAVTAALISANWGIYIWSIFSGKALEAALGYYINPLFSVFLG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ L ERL+ ++ A L + +++I+T+ +P+++LA+ TW Y + ++++P+G ++
Sbjct: 120 ALLLGERLDKIKWAAMALALAAVIILTVESGSVPIVALALTGTWGFYAYFKRSLPIGPNQ 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GF +E+ +L++PAL ++ + +SG HF +G+ PDT LIG G++ + +++ G K
Sbjct: 180 GFLLEVLLLSVPALGFIAYLAYSGTGHFMMGSAPDTWLLIGCGVVTAVPLMLYANGAKLL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+LST+G+++Y AP ++ + +VF+ + R I F ++ A+ +Y + +
Sbjct: 240 RLSTIGMLQYIAPTMIFLIAVFVFGEQFGRARMIAFPMIWCALALYSYALWKETRLARA 298
>gi|71281671|ref|YP_266850.1| rarD protein [Colwellia psychrerythraea 34H]
gi|71147411|gb|AAZ27884.1| rarD protein [Colwellia psychrerythraea 34H]
Length = 300
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 2/294 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G L AY+LWG P+Y + L + E++ HRV+WS + I+
Sbjct: 7 NQLEENSNRNGALSALSAYLLWGFAPIYFKLLTAIEPGEIMMHRVIWSTVFLLVMIIVMK 66
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ + + + + SA+ LAV+W FI+A+ S Y++ P+ +V LG
Sbjct: 67 KWSQLVAIFQQPKILLQLSL-SASFLAVNWFLFIWAVNNNHLLDASLGYYINPLFNVILG 125
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+F ERL Q+IA L ++ +L+ + G P++SLA+A T++ Y RK +P+ S
Sbjct: 126 MIFFHERLRRNQLIAVGLALVGVLVQLIALGTLPIISLALASTFAIYGLIRKKLPINSFI 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G FIE ++ AL Y + S + + LI G++ + F+ KR
Sbjct: 186 GLFIESLMMLPIALIYWFFFVESSTSNMAINAASLNFTLIMAGIVTTAPLLFFTIAAKRL 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
LST+G +Y P +M + + F ++ + + I F + A+ +Y L +
Sbjct: 246 ALSTLGFFQYLGPSIMFLLATFYYQETMKSAELITFVFIWAALALYSLDSFKKR 299
>gi|323500071|ref|ZP_08105025.1| RarD protein [Vibrio sinaloensis DSM 21326]
gi|323314927|gb|EGA67984.1| RarD protein [Vibrio sinaloensis DSM 21326]
Length = 296
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 66/295 (22%), Positives = 135/295 (45%), Gaps = 1/295 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G ++ LWGI PLY QFL + E+++ R++ S+P ++ + L
Sbjct: 2 SEQRLGNWMAAISFFLWGILPLYYQFLPNAATDELLAVRLVASVPCGLIIVLAITKRLPN 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK + ++ + + ++++ W F +AL + S +F++P++ LG L
Sbjct: 62 LKALWADKYSLKLTFLGSLMMSISWAAFTWALTNDRVIDASLGFFISPLMMSALGVFVLG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ + +A L + + + G P+++L +AV ++ Y + +K I S F+E
Sbjct: 122 ESLSLGKKVALSLAAIGISYQIIQYGQIPVIALLMAVFFTLYGWCKKKIRYDWSTCLFME 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL AL Y+++ +S G +G +S I+ +STV
Sbjct: 182 ALVLTPFALSYLLFKEWSLGTESLHQGWQVFSLYMGAAPATLIPLVFYSIAIRLTTMSTV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+M+Y P + + ++F+ + D V+ + F + ++ +L ++ K +
Sbjct: 242 GLMQYIEPSIQFLIAIFLFGELFDQVKLVSFSFIWAGLLFIVLESLRTRHKLRKA 296
>gi|312140122|ref|YP_004007458.1| integral membrane protein [Rhodococcus equi 103S]
gi|311889461|emb|CBH48778.1| putative integral membrane protein [Rhodococcus equi 103S]
Length = 310
Score = 98.1 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G F AY++WG P++ L+ LEV++HR++W++ + ++ SL +
Sbjct: 12 GLAAGFGAYLIWGTFPIFFGLLDPAGSLEVLAHRMVWTVLLMLAVLLVLGKLGSLRGLSA 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ + +AV+WG +IYA+++ + YFV P++SV +G + +E++
Sbjct: 72 RTWG---LVTAATVAIAVNWGVYIYAVVSGNVVEAALGYFVNPLVSVLIGVLVFREKIRA 128
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
QI A +L ++++I+T+ G P + +A++++ Y +K +P+ E V A
Sbjct: 129 AQIAALVLAAIAVVIITVDYGRPPVVALTLALSFALYGVVKKVVPLDPRTSLTAEGLVAA 188
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y+V SG F + +L L+ G + + +F +R L+T+G+++Y
Sbjct: 189 PFAIVYLVVLLVSGTGSFLGNGVGHSLLLVAAGPVTAAPLLLFGLAAQRIPLTTLGLLQY 248
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P L +V V ++ + + R + F ++ +A+VV+
Sbjct: 249 LTPALQMVWGVVVMHEVMPPSRWVGFALIWVALVVFTTD 287
>gi|71735683|ref|YP_276833.1| rarD protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257483046|ref|ZP_05637087.1| rarD protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|71556236|gb|AAZ35447.1| rarD protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320326419|gb|EFW82472.1| rarD protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320331609|gb|EFW87547.1| rarD protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330891291|gb|EGH23952.1| rarD protein [Pseudomonas syringae pv. mori str. 301020]
gi|330985860|gb|EGH83963.1| rarD protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 295
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 139/292 (47%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG+ P+Y + + V +E+I HRVLWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLFPIYFKAISAVPAIEIIIHRVLWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + + +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFATIGVAQQVWNVGSLPWVSLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVSAQPEFWTTTQAIWLAAAGPVTLIPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYLAPTLVLLLAVLLYGEHLTTSTIITFAFIWAGLAIYSVDIWLKSR 292
>gi|224476565|ref|YP_002634171.1| hypothetical protein Sca_1078 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421172|emb|CAL27986.1| putative membrane protein [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 298
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 69/296 (23%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L+ AYILWG P+Y L + E++++R++ S+ + I
Sbjct: 1 MNQEFKRGILYSLIAYILWGTLPIYWSLLNDIGPFEILAYRIILSMIFMVVLIYAMGKYT 60
Query: 79 SLLKDTLKNPKAVGML-VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + I+ ++WG FI+A+ +S Y++ P++S+ L +
Sbjct: 61 QFINNIKLLTMKQLIALTAAGYIITINWGTFIWAVNNNHVLQSSLGYYINPLVSIILAMI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FLKER ++ +A + ++ +L MT+ G P++S+ +A+++ Y +K +P+ +
Sbjct: 121 FLKERFTKMEWLAIIFAVIGVLYMTIKIGEFPIVSIMLALSFGFYGLLKKIVPIDALSSI 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E V AL Y+++ + L G + FS G +R L
Sbjct: 181 TYECIVTTPAALIYIIYLWTTHQTTVGFNMPTFWLLFSGAIT--AIPLISFSAGARRIPL 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S +G ++Y P LM + +F+ K+ D + I F + ++VY + + K+K
Sbjct: 239 SLMGFIQYVGPTLMFILGIFVYKEAFDINQLITFIFIWAGIIVYCISQYVQMKKDK 294
>gi|228475416|ref|ZP_04060134.1| RarD protein [Staphylococcus hominis SK119]
gi|228270198|gb|EEK11633.1| RarD protein [Staphylococcus hominis SK119]
Length = 301
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 72/294 (24%), Positives = 143/294 (48%), Gaps = 6/294 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSL 80
G LF A++LWGI P+Y +F+ +S E++++R++ ++ + I
Sbjct: 8 KKGILFALGAHLLWGILPIYWRFIHGISAFEILAYRIILAMVFMILMIFVLKKSQVLKHD 67
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +P + ++ + ++ ++WG FI+A+ TS Y++ P++SV L +FLK
Sbjct: 68 INQLIAHPIQLVAIIIAGYVITINWGTFIWAVSNGHVLQTSLGYYINPLVSVLLAFIFLK 127
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER N + +A + + ++ MT+ G P++SL +A ++ Y +K + V + G IE
Sbjct: 128 ERFNTFETLAIVSAAIGVIYMTMKIGEFPIISLMLAFSFGIYGLLKKLVRVEAMSGIAIE 187
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V A L Y+++ + L L G + +FS G +R LS
Sbjct: 188 CIVTAPAGLIYIIYLWQAHQSSVGLNMSTFLLLFSGAVT--AVPLILFSAGARRIPLSLT 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G ++Y +P ++ + +F+ K+ D + I F + I + +Y + I ++
Sbjct: 246 GFIQYVSPTIIFLLGIFVFKEKFDIHQFITFIFIWIGIALYSISQYIKMKRSPR 299
>gi|261407158|ref|YP_003243399.1| RarD protein, DMT superfamily transporter [Paenibacillus sp.
Y412MC10]
gi|261283621|gb|ACX65592.1| RarD protein, DMT superfamily transporter [Paenibacillus sp.
Y412MC10]
Length = 292
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 77/290 (26%), Positives = 146/290 (50%), Gaps = 2/290 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + AYI+WG+ PLY + E V E++SHRV+W+ + + +K
Sbjct: 4 GLVNAIIAYIMWGVLPLYWKLFENVPAGEILSHRVVWTFVFMGILVAVQRR-WGDMKRVA 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + L S ++A +W FI+A+ TS Y++ P+++V L VFL+E+ +
Sbjct: 63 TSRSLLLSLAASGLLIAANWLIFIWAVNNGHVVETSLGYYLNPLLNVLLAVVFLREKPSR 122
Query: 146 LQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q + + ++LI+ + G P +++++AV++ Y A+K I +S G E V+
Sbjct: 123 GQWLGIAIAGAAVLIIAIDYGRFPWVAISLAVSFGLYGLAKKKIVQDASVGLLSETAVIL 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y ++ G + P + L+ G++ + F+ R LST+G ++Y
Sbjct: 183 PVAIGYWIYLAAVGKTTAWTLPAPVFVELLLSGVVTALPLLFFARAAARMALSTLGFVQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P +M++ S+F+ K+ + V I F ++ A+VVY + +V ++ K
Sbjct: 243 IGPTIMLLLSIFVFKESVSPVLLIGFALIWTALVVYAVASVRSTKLAKAS 292
Score = 39.1 bits (89), Expect = 0.93, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 49/140 (35%)
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF 223
++G+ +A + + + V + E + + V G
Sbjct: 2 NNGLVNAIIAYIMWGVLPLYWKLFENVPAGEILSHRVVWTFVFMGILVAVQRRWGDMKRV 61
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ L L GLL + + IF + + + + Y PLL ++ +V L++
Sbjct: 62 ATSRSLLLSLAASGLLIAANWLIFIWAVNNGHVVETSLGYYLNPLLNVLLAVVFLREKPS 121
Query: 284 TVRTIVFGIVVIAMVVYLLP 303
+ + I A+++ +
Sbjct: 122 RGQWLGIAIAGAAVLIIAID 141
>gi|134298490|ref|YP_001111986.1| transporter DMT superfamily protein [Desulfotomaculum reducens
MI-1]
gi|134051190|gb|ABO49161.1| RarD protein, DMT superfamily transporter [Desulfotomaculum
reducens MI-1]
Length = 318
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/294 (24%), Positives = 150/294 (51%), Gaps = 4/294 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + +G + +Y+LWGI P+Y + +++V E+++HR++WS + ++
Sbjct: 3 KQYTKEQFIGIIAAAGSYLLWGILPIYWKLVQKVPAHEILAHRIVWSFMFMTLLLLTIGK 62
Query: 77 GLSLLKDTLK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + PK + + ++ I++++W +I+A+ TS Y++ P+ISV
Sbjct: 63 LRAFITEFYMIACQPKKLFGMFMASAIISINWFTYIWAVNHNHILDTSLGYYLNPLISVL 122
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGS 192
LG LKE+L+ Q+ + L + +L M H G IP +++ +A +++ Y +K + VG+
Sbjct: 123 LGIFVLKEKLSFWQMFSFFLASIGVLNMAFHVGTIPWVTIVLAFSFALYGLIKKVVNVGA 182
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
IE + AL Y+ + + F ++ L+G G++ + +FS G K
Sbjct: 183 IASITIETLFMMPFALLYLGYVHKNSMGAFGFQYPTLSMLLMGAGVVTAVPLILFSSGAK 242
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
R LS +G ++Y +P + ++ VF+ + + + I F + A++++ L
Sbjct: 243 RLPLSFIGFIQYMSPTITLLLGVFLYHESFNRIHLISFSFIWFALIIFSLAKTK 296
>gi|255597317|ref|XP_002536744.1| Protein rarD, putative [Ricinus communis]
gi|223518684|gb|EEF25640.1| Protein rarD, putative [Ricinus communis]
Length = 360
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 110/297 (37%), Gaps = 6/297 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ N G + A WG+ PLY L+ VS E+++HRV WS + I
Sbjct: 1 MNANNQKQKEGAGYAALLVALCWWGLMPLYYWHLKAVSAPEMLAHRVFWSFVVLSAVIAL 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L+ + + ++ + + A +L+ +W +I A +T S YF+ P++S
Sbjct: 61 ----KPALRQQMGDWRSFALALLPAVLLSANWVVYILASVTGNALQASLGYFLNPLLSAA 116
Query: 134 LG--SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
LG + + +A L + + +
Sbjct: 117 LGIVFLNERLNGLKAAALALGLAGTFVQCYAHGGVPVFAVMLTVTFSLLGLTRKVWPTRN 176
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + E V+ AL Y + F + ++ ++ G L +++Y +
Sbjct: 177 AIVSTWRETVVMMPFALGYFGYLSSHHALAFTSLGVDASVLMMLAGPLTVVPLALYAYAM 236
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
L+ +M+Y P + + ++ + + + TV +G++ + + +V
Sbjct: 237 PLVSLTESAVMQYATPTVTFILALTVFHERLTTVDLTGYGLIWCGLALATYASVRRR 293
>gi|90409703|ref|ZP_01217720.1| hypothetical membrane protein [Photobacterium profundum 3TCK]
gi|90329056|gb|EAS45313.1| hypothetical membrane protein [Photobacterium profundum 3TCK]
Length = 297
Score = 98.1 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 1/290 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G A+++WG PLY QFL E+++ R+++S+P + + F
Sbjct: 3 SRLHGNFIAIIAFVIWGGLPLYFQFLPLADTNELLAMRIIFSVPLMLLVLKCFKISNLTF 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+K KA+ + + + F +A+ Q S YF+ P+ SV LG VF K+
Sbjct: 63 SMAIKYKKALCLCFLAGLFNCISLYTFTWAITHEQVLAASLGYFINPLFSVALGMVFFKD 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+L+ Q IA +L + + G P +SL + +++ Y +K I S IE+
Sbjct: 123 KLSLAQQIAVVLAVFGIGYQVYGYGELPWVSLVMGCSFALYGLTKKFIQFDSLTSMSIEV 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L AL Y++ + S F + + G + +F+ +K+ L+ +G
Sbjct: 183 TLLMPFALGYMLLSFLSQTSTVFSSDFSTAVLYAGAAPITLVPLVLFAVAVKKTTLTMIG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ +Y P L + ++F+ + +D V+ + F + + +++ L +I S +
Sbjct: 243 LTQYIEPSLQFLLAIFVFHEVLDQVKLVSFSFIWLGLLLCTLEALILSKR 292
>gi|327191284|gb|EGE58324.1| putative permease protein [Rhizobium etli CNPAF512]
Length = 305
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 98/292 (33%), Positives = 171/292 (58%), Gaps = 3/292 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P Y + + +S EVI+HR++WSLP +++ + ++
Sbjct: 15 SPRGFAFALTAYLLWGFLPFYMKAVAHISPAEVIAHRIVWSLPLAGIVLIFLGRT-ADIR 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A+++ V+WG +++A+ + YF+ P+ S+FLG+V LKE+
Sbjct: 74 AALRSPRMLAMGALTASLITVNWGTYVWAIGADHSLDAALGYFINPLFSIFLGAVLLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A L L++ I+ GIP ++L +AV+W Y RKT+P G ++GFF+E+
Sbjct: 134 LQPLQIAAIALAALAVAILAFDSGGIPWVALTLAVSWGFYALLRKTLPFGPNQGFFLEVL 193
Query: 202 VLAIPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L+ PAL Y+V+ F G+ + + DT L+G G++ + I++ G K KLST+G
Sbjct: 194 ILSGPALLYIVYLEFGSGQGHLYRTGLADTALLLGCGVVTAVPLMIYANGAKLLKLSTIG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
IM+Y AP ++ + +VF ++P+ T R I F ++ + +Y + S +
Sbjct: 254 IMQYIAPTMIFLIAVFAFQEPLGTARMIAFPLIWAGLFLYSWSMLKGSRGRR 305
>gi|229191267|ref|ZP_04318254.1| chloramphenicol-sensitive RarD protein [Bacillus cereus ATCC 10876]
gi|228592184|gb|EEK50016.1| chloramphenicol-sensitive RarD protein [Bacillus cereus ATCC 10876]
Length = 300
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 72/292 (24%), Positives = 144/292 (49%), Gaps = 3/292 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SLLK 82
G +F +YI+WGITP+Y + ++ VS E+++ RV WS + + + +K
Sbjct: 9 GIVFAVLSYIMWGITPIYWKLIQHVSSGEILAQRVFWSFIFMLVLLFFMKKWSTYVEFMK 68
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +KNPK V L ++ +++ +WG F++A+L + S ++ P+ S+ +G + LKE+
Sbjct: 69 EIVKNPKLVWSLFIASVLISSNWGIFMWAVLNGKILEASLGQYINPLTSMLIGVIALKEK 128
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L+ QI+A +L + +L +T H G+ + K + S +
Sbjct: 129 LSGSQILAFILAGIGVLTLTFHYGVIPWISLSLALTFGFYGLAKKMIKTDSVIGLTLETM 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ P + + F ++ +L LIG G++ + +F+ K+ LS +GI+
Sbjct: 189 VISPIALVYLAYLMFQSQIQFFNSVSTSLLLIGSGVVTALPLLLFTKSAKKVSLSMLGIL 248
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+Y +P L +++ VF+ + + I F + +A+++Y ++ S K K
Sbjct: 249 QYISPTLSLIAGVFLYNETLTKAHFIAFTFIWLALIIYTFSSITTSSKESKK 300
>gi|209548633|ref|YP_002280550.1| RarD protein, DMT superfamily transporter [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209534389|gb|ACI54324.1| RarD protein, DMT superfamily transporter [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 305
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 97/289 (33%), Positives = 170/289 (58%), Gaps = 3/289 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P+Y + + +S EVI+HR++WSLP ++ +
Sbjct: 15 SPRGFAFALTAYLLWGFLPIYMKAVAHISPAEVIAHRIVWSLPLAGIVLIVLGRT-QDVA 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A+++ V+WG +++A+ + YF+ P+ S+FLG+V LKE+
Sbjct: 74 TALRSPRMLAMAALTASLITVNWGTYVWAIGAGHSLDAALGYFINPLFSIFLGAVLLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A +L L++ I+ GIP ++L +A++W Y RKT+P+G ++GFF+E+
Sbjct: 134 LQPLQIAAIVLAALAVAILAFDSGGIPWVALTLAISWGFYALLRKTLPLGPNQGFFLEVL 193
Query: 202 VLAIPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L+ PAL Y+++ F G+ + + DT L+G G++ + I++ G K KLST+G
Sbjct: 194 ILSGPALLYILYLEFGSGQGHLYRTGLADTTLLLGCGVITAVPLMIYANGAKLLKLSTIG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IM+Y AP ++ + +VFI +P+ T R I F ++ + +Y + S
Sbjct: 254 IMQYIAPTMIFLIAVFIFHEPLGTARMIAFPLIWAGLFLYSWSMLKGSR 302
>gi|311068625|ref|YP_003973548.1| putative integral inner membrane protein [Bacillus atrophaeus 1942]
gi|310869142|gb|ADP32617.1| putative integral inner membrane protein [Bacillus atrophaeus 1942]
Length = 298
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/296 (21%), Positives = 136/296 (45%), Gaps = 3/296 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G ++ +++LWG+ PLY + LE + L++++HR++WS + + +
Sbjct: 3 NSSTKKGIIYTAVSFVLWGLFPLYWKLLEHLPALDILAHRIIWSFVFMCIVLAVLRQWKT 62
Query: 80 LLKD--TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K+ +LK L+ ++ +++++W +I+A+ S Y++ P++SV LG +
Sbjct: 63 GWKELLSLKKKGGFLSLLLASVLISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGIL 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKERLN LQ++A + +++I G + +A+ + +S +
Sbjct: 123 FLKERLNRLQVVAVSIAAAAVIISAFQYG-SIPYIALLLAFSFGLYGLCKKRTSLPSAIG 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L I + + + L G+ + +F+ G KR L
Sbjct: 182 LTLETLLITPAALCYLLLGAHQSASGAVSGGTWVLLFFAGIFTALPLLLFAEGAKRLPLY 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
VGI++Y AP + ++ VF+ + + F + A++++ V +K+
Sbjct: 242 QVGILQYIAPTITLLLGVFVYHEAFTGSKAFTFACIWAALLLFTFSQVKWKRISKS 297
>gi|330965494|gb|EGH65754.1| rarD protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 295
Score = 97.7 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG+ PLY + + V +E+I HR LWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLFPLYFKAIAAVPAIEIIIHRALWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L + H +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQWVAVALAATGVAQQVWHVGSLPWVSLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVTAQAEFWTTTQAIWLAAAGPVTLIPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+G ++Y AP L+++ +V + + + T I F + + VY + + S +
Sbjct: 241 TLGFLQYIAPTLVLLLAVLLYGEHLTTSTIITFAFIWAGLAVYSVDIWLKSRGRR 295
>gi|226313511|ref|YP_002773405.1| hypothetical protein BBR47_39240 [Brevibacillus brevis NBRC 100599]
gi|226096459|dbj|BAH44901.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 302
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 78/288 (27%), Positives = 141/288 (48%), Gaps = 2/288 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G ++ AY+ WG+ PLY + + + E+++HR++WS+ V I S+
Sbjct: 2 RQGIIYAIVAYLAWGLLPLYWKLFQAMGAWEILAHRIVWSVIFVAIIIQVTKRWRSMWGA 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + S ++ +W FI+A+ TS Y++ P+I+V LG +FLKE++
Sbjct: 62 VTGFKMFGALAICSLL-ISANWLIFIWAVNNNHVMQTSLGYYMNPLITVLLGVLFLKEKM 120
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q A +L +L +T G IP +SL++A+T++ Y A+K + + + G E
Sbjct: 121 HAGQWFALILAAFGVLFITFQYGEIPWVSLSLALTFAFYSLAKKLVRLEAMVGLAWETLF 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+A A Y++ +G E L L G+ + F+ R LS VG +
Sbjct: 181 VAPIAFGYLLMLQVNGTETMTSLAWWQLLLLTLAGVATAMPLYWFAQAATRLPLSVVGFI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+Y AP + ++S+VF+ +P I FG + A++V+ + +V K
Sbjct: 241 QYLAPTISLLSAVFLFGEPFTQTHFISFGFIWSALIVFTVSSVRIKRK 288
>gi|190572428|ref|YP_001970273.1| putative drug/metabolite transmembrane transporter protein
[Stenotrophomonas maltophilia K279a]
gi|190010350|emb|CAQ43958.1| putative drug/metabolite transmembrane transporter protein
[Stenotrophomonas maltophilia K279a]
Length = 298
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/294 (28%), Positives = 150/294 (51%), Gaps = 3/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L +++WG+ P+Y L +V ++I+HR++WS V ++ S L
Sbjct: 6 KEQRRGLLVTASTFVIWGLVPVYWHLLNEVPSFQIIAHRIIWSTVMVLGWLLISSR-LGW 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P+A+ +L+ S+ +A +WG +I+A+ TS YF+ P+++V LG + LK
Sbjct: 65 WQKIAAQPRALPILLVSSLTIAFNWGLYIWAVNAGHVIETSLGYFINPLVNVLLGVLVLK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL LQ +A + + + +T+ +G P ++L +A ++ Y RK + V G +E
Sbjct: 125 ERLRRLQWVAVAMAAVGVAWLTIDAGTPPWIALGLACSFGLYGLLRKLVSVDPVAGLGVE 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGN-IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L +PAL + +W G FF G + L L+ G + + F+YG+KR LS
Sbjct: 185 SMYLFLPALAFAIWAENGHGGAFFHGWGWRNDLLLVFGGAVTAVPLIGFAYGVKRIPLSL 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
VGI++Y AP L ++ VF + DT + I F + +++++ + +
Sbjct: 245 VGILQYIAPSLQLLLGVFFFHEGFDTAKAIGFAAIWAGLILFVGDNIRTMRAKR 298
>gi|256380650|ref|YP_003104310.1| RarD protein, DMT superfamily transporter [Actinosynnema mirum DSM
43827]
gi|255924953|gb|ACU40464.1| RarD protein, DMT superfamily transporter [Actinosynnema mirum DSM
43827]
Length = 313
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 72/290 (24%), Positives = 144/290 (49%), Gaps = 6/290 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + AY+LWG+ P Y L +E+++HR++WSL + +L
Sbjct: 21 RGIAYGVGAYVLWGVVPAYWPLLAPAGAVELLAHRIVWSLLFMALVTAALGKWGALRGLP 80
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
++ ++ ++ ++AV+WG +IYA+ + + + YF+ P+ SV L + L+ERL
Sbjct: 81 PRSWL---LVTAASALIAVNWGVYIYAVNSGRVVEAALGYFINPLFSVLLAVLVLRERLR 137
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q A + +++++ + G P +SLA+A +++ Y +KT+P+ S+ E V+
Sbjct: 138 PAQYAAIGVAGAAVVVLAVDYGTLPWISLALACSFAFYGLIKKTVPLDSTASLTAESAVM 197
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+ Y++W G +G + G + G +R + T+G+++
Sbjct: 198 TPVAVGYLLWLGSAGTFTGHGAAHTALMVSTGLVTAVPLMLFG--AGARRIPMITLGMLQ 255
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
Y AP+L VF++++P+ R F +V +A++++ V+ S K +
Sbjct: 256 YLAPVLQFAWGVFVMREPMPASRWFGFAMVWVALLLFTGDAVVRSRKQRK 305
>gi|295399995|ref|ZP_06809975.1| RarD protein, DMT superfamily transporter [Geobacillus
thermoglucosidasius C56-YS93]
gi|312110755|ref|YP_003989071.1| RarD protein, DMT superfamily transporter [Geobacillus sp. Y4.1MC1]
gi|294977774|gb|EFG53372.1| RarD protein, DMT superfamily transporter [Geobacillus
thermoglucosidasius C56-YS93]
gi|311215856|gb|ADP74460.1| RarD protein, DMT superfamily transporter [Geobacillus sp. Y4.1MC1]
Length = 311
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 4/293 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG- 76
N +G L+ +Y+LWGI PLY + LE LE+++HR++WS + +V
Sbjct: 2 NRISEEKIGILYTAFSYLLWGILPLYWKMLESRPALEILAHRIIWSFFFMVTLLVVTRQI 61
Query: 77 --GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L+ K PK + +A +++ +W +I+A+ TS Y++ P++SV L
Sbjct: 62 TSWRKLVSLMAKQPKLAWGISAAAILISANWFVYIWAVNHGHVVETSLGYYINPLVSVVL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G V LKERLN Q I+ L + + IMT G P ++L++A ++ Y +K V S+
Sbjct: 122 GMVVLKERLNVWQWISFFLATIGVFIMTFQYGAFPWVALSLAFSFGIYGLVKKLASVDSA 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E V+ +L Y+ I L LIG G + F+ G KR
Sbjct: 182 IGLTLETMVVTPISLIYLFVLYHHHASLLSTITIWQALLLIGAGPATAVPLLYFAKGAKR 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
L+ +G ++Y AP L ++ +F+ + V F + A++++
Sbjct: 242 ISLTMLGFLQYIAPTLTLLFGIFLFHEAFTKVHIYAFSCIWAALIIFSFSKTK 294
>gi|304392048|ref|ZP_07373990.1| protein RarD [Ahrensia sp. R2A130]
gi|303296277|gb|EFL90635.1| protein RarD [Ahrensia sp. R2A130]
Length = 303
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 1/294 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ A G + AY LWG PLY +E V VL++++HRV+WSLP +
Sbjct: 10 KPAGDEAKAGFFYALAAYGLWGFLPLYFWVMEGVPVLQMLAHRVVWSLPVALAVLAATGR 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L L K PK + M+ +AT + V+WG +I ++ + Y++ P+ISV LG
Sbjct: 70 -LGELWALRKQPKLLAMMAVTATFITVNWGVYILSVEMNLTSQAALGYYINPLISVLLGV 128
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V L ERL+ LQ IA L + +L+ T+ G A+ +
Sbjct: 129 VLLSERLDRLQKIAIGLALTGVLVKTISGGTFPWIALTLAFSFAFYGYLRKTVAIGPTAG 188
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F L P + G F ++ +L G + + +++Y KR +L
Sbjct: 189 FTVEVALLFPIALGYLIWAEMQGVGRFTQSLEMAGWLAFAGPVTAAPLILYAYSAKRLRL 248
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+T+G+M+Y AP ++ + S + + +D + I F ++ A+V+Y + + + +
Sbjct: 249 ATLGLMQYIAPSMIFLLSFTLFGEELDMAQIITFALIWSALVLYTISVMRPAKQ 302
>gi|296268289|ref|YP_003650921.1| RarD protein, DMT superfamily transporter [Thermobispora bispora
DSM 43833]
gi|296091076|gb|ADG87028.1| RarD protein, DMT superfamily transporter [Thermobispora bispora
DSM 43833]
Length = 301
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 4/282 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + AY +WG+TPLY LE +E+++HR++WSL V + + +
Sbjct: 5 RRGVAYGVAAYAIWGLTPLYWPLLEPSGAVEILAHRMVWSLVVVAALLAVRRRWSWIREL 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
T + V +L +A +++V+WG +IYA+ + S YF+ P+++V G + ERL
Sbjct: 65 TGRQ---VLLLAIAAIVVSVNWGVYIYAVNSGHVVDASLGYFINPLVNVLFGIMIFGERL 121
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q +A L L++ ++T G P ++L +A T+ Y +K V +E +E V
Sbjct: 122 RTGQWVAVGLGTLAVAVLTYGYGRPPWIALVLAFTFGIYGVVKKKARVEGTESLAVETLV 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ +PA+ Y+ SG F + L + G G++ + F+ LS VG++
Sbjct: 182 MLLPAVVYLGTLHASGEGTFGRYGLGHALLVAGAGVVTALPLIFFTIAALSIPLSLVGLL 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+Y AP+L + V I + + R F IV +A+ V+ T
Sbjct: 242 QYIAPILQFLCGVLIAHETMPPSRWAGFCIVWLALAVFTWDT 283
>gi|330874783|gb|EGH08932.1| rarD protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 295
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG+ PLY + + V +E+I HR LWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLFPLYFKAIAAVPAIEIIIHRALWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ +A L + H +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQWVAVALAATGVAQQVWHVGSLPWVSLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVTAQAEFWTTTQAIWLAAAGPVTLIPLVYFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+G ++Y AP L+++ +V + + + T I F + + VY + + S +
Sbjct: 241 TLGFLQYIAPTLVLLLAVLLYGEHLTTSTIITFAFIWAGLAVYSVDIWLKSRGRR 295
>gi|168703267|ref|ZP_02735544.1| rarD protein [Gemmata obscuriglobus UQM 2246]
Length = 327
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/294 (24%), Positives = 143/294 (48%), Gaps = 4/294 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY 73
+ + G +F AY+ WG+ PLY L V E+++HR+ WSLP + +
Sbjct: 2 NDESGAQFRSGLMFGLVAYLWWGLVPLYFAALAAFGVPAWEILAHRIAWSLPIMALLTLA 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+G + L++ V L+ SA +LA++W +IYA +T + S Y++ P+++
Sbjct: 62 LAG-WKDVVRVLRSRALVSTLLLSACLLALNWLIYIYATVTNRVVEASLGYYMMPLVNAA 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L +FLKE+L Q A +L+ L + I + +++A+ +T+ AY RK + V S
Sbjct: 121 LAPIFLKEKLRPAQFPALVLVALGVAIPFAWNGNFTWIAVALPITFGAYGLVRKKVAVES 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G +E ++ P+L ++++ +G H + + G++ ++ ++
Sbjct: 181 MTGLTVETILMLPPSLGFLLYLSATGQNHMTPTDWRLNALIAFSGIVTVVPLLTYTLSLR 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
R L V +++ +P + +V +V L + + R F V A+++++ +
Sbjct: 241 RLPLLAVSFIQFLSPTVQMVIAVIWLGETLGPERVAAFVCVWSAVLIFIGDALW 294
>gi|269793246|ref|YP_003318150.1| RarD protein, DMT superfamily transporter [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100881|gb|ACZ19868.1| RarD protein, DMT superfamily transporter [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 296
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/296 (23%), Positives = 148/296 (50%), Gaps = 9/296 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
E ++ G L + AY LWG+ P+Y + L V L ++ HR++WS + +++
Sbjct: 2 AEGVQRDSLNGVLCMLGAYFLWGVLPVYWKALGHVEPLVILCHRIVWSSVLLAPLVLWLR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++ L++P VG L S + V+W +I+++ + + TS YF+ P+++V +G
Sbjct: 62 R--GEVRALLRSPGRVGFLALSGAAVGVNWLIYIWSVNSGRILETSLGYFILPLLNVVVG 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VF +ER+ L+ +A L +L + +P+ +L +A ++ Y +K +PV
Sbjct: 120 LVFFRERITTLKGLAVLAAASGVLFELVRQGALPMAALGLAGSFCVYGILKKRVPVDPLV 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G F+E +L++PA+ ++ G G L GL+ S +F G +
Sbjct: 180 GLFLETSILSVPAMLFLGMRGMFGW------GPGTMWLLFSAGLVTSLPLWLFGLGARGV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ T+G +++ +P + + + + + + + R + F +++ + +Y L +VI +
Sbjct: 234 RMVTMGFLQFLSPGISFLIGLLVYGEAMSSARIVAFCAILVGVSLYGLDSVIGMRR 289
>gi|325674397|ref|ZP_08154085.1| DMT superfamily drug/metabolite transporter [Rhodococcus equi ATCC
33707]
gi|325554657|gb|EGD24331.1| DMT superfamily drug/metabolite transporter [Rhodococcus equi ATCC
33707]
Length = 310
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 145/279 (51%), Gaps = 4/279 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G F AY++WG+ P++ L+ LEV++HR++W++ + ++ SL +
Sbjct: 12 GLAAGFGAYLIWGMFPIFFGLLDPAGSLEVLAHRMVWTVLLMLAVLLVLGKLGSLRGLSA 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ + +AV+WG +IYA+++ + YFV P++SV +G + +E++
Sbjct: 72 RTWG---LVTAATVAIAVNWGVYIYAVVSGNVVEAALGYFVNPLVSVLIGVLVFREKIRA 128
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
QI A +L ++++I+T+ G P + +A++++ Y +K +P+ E V A
Sbjct: 129 AQIAALVLAAIAVVIITVDYGRPPVVALTLALSFALYGVVKKVVPLDPRTSLTAEGLVAA 188
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y+V SG F + +L L+ G + + +F +R L+T+G+++Y
Sbjct: 189 PFAIVYLVVLLVSGTGSFLGNGVGHSLLLVAAGPVTAAPLLLFGLAAQRIPLTTLGLLQY 248
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P L +V V ++ + + R + F ++ +A+VV+
Sbjct: 249 LTPALQMVWGVVVMHEVMPPSRWVGFALIWVALVVFTTD 287
>gi|255526387|ref|ZP_05393300.1| RarD protein, DMT superfamily transporter [Clostridium
carboxidivorans P7]
gi|296188398|ref|ZP_06856789.1| protein RarD [Clostridium carboxidivorans P7]
gi|255509893|gb|EET86220.1| RarD protein, DMT superfamily transporter [Clostridium
carboxidivorans P7]
gi|296047019|gb|EFG86462.1| protein RarD [Clostridium carboxidivorans P7]
Length = 292
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 72/288 (25%), Positives = 142/288 (49%), Gaps = 2/288 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G ++ AY LWG+ +Y + ++ V +E++S+R++W+ I
Sbjct: 1 MRNEKTVGVIYAVAAYTLWGVLTIYWKLIDGVFPIEILSNRIVWAFVFTVAIIAATKQ-W 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LK K+ K + + ++ ++A +WG +I+A+ + + S Y++ P+++V LG V
Sbjct: 60 GELKRIAKDKKQMLYIFIASILIAFNWGLYIWAVNSNRIIDASLGYYINPLVAVALGVVI 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
KE+L+ Q IA ++I TL G IP +SL +A+++ Y +K + S G
Sbjct: 120 FKEKLSLWQGIALSTAFFGVIIKTLQYGKIPWISLGLAISFGLYGAMKKFVKANSIVGLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E ++ A Y+ FSG F + LIG G++ + +F+ +R LS
Sbjct: 180 LETTMITPIAAVYIASRQFSGVGAFGRESAVVIFLLIGSGIVTAVPLLLFASAARRLPLS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+G +Y +P + + +F+ + ++ + F + A+V+Y L +
Sbjct: 240 VIGFTQYISPTISLFIGIFMYHEGFTSIDMVSFVFIWSALVMYSLSQI 287
>gi|295396389|ref|ZP_06806552.1| DMT superfamily drug/metabolite transporter RarD [Brevibacterium
mcbrellneri ATCC 49030]
gi|294970758|gb|EFG46670.1| DMT superfamily drug/metabolite transporter RarD [Brevibacterium
mcbrellneri ATCC 49030]
Length = 320
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/292 (24%), Positives = 144/292 (49%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F AY+LWG+ PL+ ++ LE+++HR++WSL +++ G
Sbjct: 23 QARRKAGLIFGLSAYLLWGVLPLFFMAIQPAGPLEILAHRIIWSLFFCLILLLFARGY-P 81
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L L+ + +G+L +A +A++W F+ + + S Y++ P++SV LG +FL
Sbjct: 82 RLWRLLRTLRVLGILAVAAITVAINWFIFVLGVDMGRIVEVSLGYYINPLVSVLLGVLFL 141
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL---SLAIAVTWSAYCFARKTIPVGSSEGF 196
KE+L LQ +A + ++++++ + +G +A++ + G+ E
Sbjct: 142 KEKLRPLQWLAMGIGTVAVIVIAVGNGQFPFLGVGVALSFGLYGLIKKQIGSRAGALEAM 201
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE VL IP++ YV++ G +F + ++ G + + +F R L
Sbjct: 202 TIETIVLFIPSVTYVLFLMSQGQSNFETQGSLHVILMLCLGPVTAIPLILFGSATSRIPL 261
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S VG+++Y P + ++ VF+L + + R F I+ + +V+ + V+ +
Sbjct: 262 SWVGMLQYVTPTMQFLTGVFLLGEDMPLSRWAGFCIIWVTVVLVCVDGVMAA 313
>gi|319440274|ref|ZP_07989430.1| putative RarD protein [Corynebacterium variabile DSM 44702]
Length = 306
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/292 (23%), Positives = 143/292 (48%), Gaps = 5/292 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS--LLKDT 84
++ Y++WG P + LE +E+++HR +W+L V ++
Sbjct: 1 MIWGVACYLMWGFFPAFFPLLEPADPMEILAHRFVWTLAFVAVVLLLLGRNHGGGFRWIG 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + G + +A ++A +WG +IYA+ + YF+ P++SV LG + L+ERL
Sbjct: 61 QLSLRQWGRIAVAAVLIAGNWGLYIYAVNNDHVADAALGYFINPLVSVLLGVLVLRERLR 120
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
LQ +A + ++++I+T+ G P + A+A ++ Y +K + + + E VL
Sbjct: 121 LLQWVAVGVAGVAVVILTVALGTPPVVSLALAFSFGLYGLMKKKVTLSPLQSLTAETLVL 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKRAKLSTVGI 261
A + Y+ W G F G L+ G++ + F+ L+T+G+
Sbjct: 181 APVGVLYLAWLQTQGTNTMFQGGHGVGHVLLLITAGVVTALPLLCFARAAHELSLTTLGM 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++Y P+L ++ +VF++ + I+ R + FG++ +A++++ T+ N +
Sbjct: 241 IQYITPVLQMLWAVFVVHEHIEPARWVGFGLIWVAVIIFTTDTLFNVPRRPK 292
>gi|295680821|ref|YP_003609395.1| RarD protein, DMT superfamily transporter [Burkholderia sp.
CCGE1002]
gi|295440716|gb|ADG19884.1| RarD protein, DMT superfamily transporter [Burkholderia sp.
CCGE1002]
Length = 297
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 86/282 (30%), Positives = 153/282 (54%), Gaps = 2/282 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++ F A+++WG+ P+Y + L Q+ LE+++HR+ WSL + + + L+ L
Sbjct: 4 GIVYAFSAFVIWGLFPVYFKTLHQIPALEMLAHRMAWSLVFILAVLGA-RHHWAWLRPAL 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + +G SA +L+ +WG +I+A+ S YF+ P+I+V G VFL ER+
Sbjct: 63 RDRRLIGRFSASAALLSANWGIYIWAVNAGHIVEASLGYFINPLINVLFGFVFLHERMRW 122
Query: 146 LQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ A L L + +T +G P +SLA+A+T+ Y RKT +G+ EG +E +L
Sbjct: 123 LQWCAVALAALGVAWLTWQNGAPPWISLALALTFGGYGLLRKTAKLGALEGLALETVLLF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ Y++ G +G HF ++ L L G + + +F+ +R LS +G+++Y
Sbjct: 183 PVAIVYLMIIGLAGASHFTHASLGLQLLLAAAGPITAVPLLLFAAAARRIPLSMLGLIQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P L +++ V I +P +VR I +G + A+ +Y +
Sbjct: 243 VTPTLQLLAGVLIYGEPFGSVRAIGYGAIWAALALYSFEGLR 284
>gi|260776029|ref|ZP_05884924.1| RarD protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260607252|gb|EEX33517.1| RarD protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 296
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/289 (19%), Positives = 133/289 (46%), Gaps = 1/289 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +++LWG+ PLY Q+L ++ E+++ R++ S+P +++ + +
Sbjct: 2 SQERTGNWMAALSFLLWGLLPLYYQYLPNAALDELLTVRLVASVPFGILIVLFVTKRMPD 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +++ + +T++++ W F +A+ + S +F++P+ LG L
Sbjct: 62 FSAIFADRRSLAITFLGSTLMSISWCAFTWAITNDRVIDASLGFFISPLTMTALGVFVLG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L+ + +A +L L + G P+++L +A+ ++ Y + +K I S F+E
Sbjct: 122 EKLSLGKKVALVLASAGLSYQVMQYGQVPVIALTMAIFFTLYGWCKKKIRYEWSTCLFVE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L AL Y+++ + G +G +S I+ +STV
Sbjct: 182 ALALTPFALGYLIFKEATVGTESLNSGWETFALYVGAAPATLIPLLFYSLAIRLTSMSTV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+M+Y P + + ++++ + D V+ + F ++ ++ + + N
Sbjct: 242 GLMQYIEPSIQFLLAIYLFGEVFDEVKLVSFSLIWAGLLFTIAESAKNR 290
>gi|317484734|ref|ZP_07943634.1| RarD protein [Bilophila wadsworthia 3_1_6]
gi|316923986|gb|EFV45172.1| RarD protein [Bilophila wadsworthia 3_1_6]
Length = 302
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 70/290 (24%), Positives = 149/290 (51%), Gaps = 2/290 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L CA+++WG ++ L+ V+ E++ +R+++S + ++ +
Sbjct: 10 KSNSLGLLAGLCAFLIWGFLVVFWHMLDAVAPFEILCYRIVFSFVSLLPVVMLTRR-WAE 68
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +N + + S+ ++ ++W +I+A+ T Q TS Y+ P+++V G +FL+
Sbjct: 69 VVSAFRNRRVALTMFASSCVVGLNWFLYIWAISTGQILETSLGYYTNPLMNVLFGFLFLR 128
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER + LQ IA LL + +L+ L P L+L++A T++ Y F RKT+ V + G FIE
Sbjct: 129 ERPSRLQGIAILLACIGVLLSFLGHNQFPWLALSLAFTFALYGFIRKTVSVEALPGLFIE 188
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL +L +++W ++G + + L G + S +F+Y + +L T+
Sbjct: 189 TIVLIPFSLGWILWLYWNGEGFLCSPTVREGFLLFLAGPVTSLPLVMFAYAARHMRLMTL 248
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G+++Y +P +F+ + ++ + F + +A+++Y + + +
Sbjct: 249 GLLQYISPTCTFFLGIFMFGETLNPAALVTFIFIWLALLLYTVESWRQTR 298
>gi|317496438|ref|ZP_07954790.1| RarD protein [Gemella moribillum M424]
gi|316913453|gb|EFV34947.1| RarD protein [Gemella moribillum M424]
Length = 305
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 73/295 (24%), Positives = 143/295 (48%), Gaps = 4/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T + + Y WG+ P+Y + L+ + EV++ RVL S + ++ S+
Sbjct: 2 NNTKKSLIAILICYFSWGLFPIYFKLLKSIDAYEVLAMRVLCSFIFMILVVLLAKNKNSI 61
Query: 81 ---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+K +N K+ +LV ++ ++ +W +I A+ T SF Y++ P++++ L V
Sbjct: 62 SLEIKKVWQNKKSFSLLVLASFLITANWLTYIIAVNTNHVLEASFGYYLNPIVTIILAVV 121
Query: 138 FLKERLNHLQIIA-ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FLKE+L +Q IA + I L + +P +S+ +A+T+ Y +K I + G
Sbjct: 122 FLKEKLTRIQTIACICVGISLLYLFISIGSLPWISILLALTFGLYSLCKKKIILSPKAGL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE +++ A+ Y+++ + F+ N + L+ G + + +F+ G L
Sbjct: 182 LIETAIVSPIAIIYMLYLASTSNITFYTSNNATIIALLLSGAITAIPLMLFAKGAVDIPL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+GI++Y P + +FI +P+ + I F I+ IA+ V+ V + K+
Sbjct: 242 YLLGILQYLPPTMQFFVGIFIYNEPLSIEKLISFIIIWIAVAVFCYSAVTSMKKH 296
>gi|261345824|ref|ZP_05973468.1| protein RarD [Providencia rustigianii DSM 4541]
gi|282566313|gb|EFB71848.1| protein RarD [Providencia rustigianii DSM 4541]
Length = 308
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 2/286 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G +YILWGITPL+ + L +E+++ R++WS+P +F + SL K
Sbjct: 4 RSGVALAIFSYILWGITPLFYRLLPDAQAMELLAQRLIWSIPFLFIIRLAIK-NKSLWKQ 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +++ + +FS++I+A+ W F YAL Q S YF+ P+ S+ LG +FL+ERL
Sbjct: 63 VWADKRSILLCLFSSSIMAISWTAFTYALTHGQVLAASLGYFINPLFSILLGVIFLRERL 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +A L I ++ G P L+L + ++ Y RK I FIE
Sbjct: 123 VFSEKMAVLFIFAGVMYQIFQYGELPALALVMGSAFAVYGLIRKFIRFDVITSLFIEALW 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L A+ W + G+ + + + F+ IKR L+ +G+
Sbjct: 183 LLPLAIGITWWLSANNMSAVMNGDWQTKILYMLAAPVTIIPLLFFTAAIKRTTLTVIGLA 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+Y P + + +VF+ + D V+ + F ++ I ++ +L +
Sbjct: 243 QYIEPTIQFLLAVFLFNELFDWVKGVSFSLIWIGLLFCILALIHKR 288
>gi|240102394|ref|YP_002958703.1| Drug/Metabolite transporter, putative [Thermococcus gammatolerans
EJ3]
gi|239909948|gb|ACS32839.1| Drug/Metabolite transporter, putative [Thermococcus gammatolerans
EJ3]
Length = 286
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 105/290 (36%), Gaps = 8/290 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + VF A WG ++ ++ +V ++ RVL++L + + F +
Sbjct: 2 KRGYILVFLAASTWGTIGIFATYIYRYKVDPFTMVFWRVLFALVILGTYVSLFLRENPFI 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ V+ + + + Y + + P SV LG + +E
Sbjct: 62 REK-----LWFYAVYGLVGVFAFYTLYFYTVKISSVGFAVLLIYTAPAFSVILGRLIFRE 116
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +I A +++++ ++++ + + ++A+ A F V + G E
Sbjct: 117 PITAEKITALVMVLVGVILVAGNVDFKVSNVALLTG-IATGFTYALYGVLAKFGVRNERP 175
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + F + L + ++++ +K ++S I
Sbjct: 176 ERVLFMTLLFGLLFLAPFSKFSVPTGAIPYLLGLAFFPTFLGYTLYNHALKEVEVSRASI 235
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P++ IV + + + + ++ + +++ A V+ L N
Sbjct: 236 VATVEPVVAIVLAYLLFGEKLTPLQLLGGTLIIGASVLVHLREGRNGRAQ 285
>gi|23100502|ref|NP_693969.1| hypothetical protein OB3047 [Oceanobacillus iheyensis HTE831]
gi|22778735|dbj|BAC15003.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 303
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/293 (24%), Positives = 150/293 (51%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---L 81
G + F AY+LWG P+Y + + + +++HR++WS + ++ + +
Sbjct: 8 QGMILTFSAYLLWGFLPIYWKQINTIEAGTILAHRIIWSFVFMILLVMLSGKWRNFVHTI 67
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ K + + ++ ++ ++W FI+A+ S Y++ P++S+ LG + LKE
Sbjct: 68 RHIKQDRKKIIAITSASIVITLNWFLFIFAVNGGHVLQASLGYYINPILSILLGLIILKE 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
QI + +L ++++ +T+ G P +S+ +A T++ Y F +KT+ + + G +E
Sbjct: 128 PSTKAQIFSFILAGVAVIYLTIGYGIFPWISILLATTFAIYGFLKKTLDLSAMFGLTLET 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ A+ Y+ + G + LFLIG G++ + +F+ G +R L++VG
Sbjct: 188 LVMTPLAIIYIFIAPQAQGFSLNPLMTMENLFLIGGGIVTAIPLLLFAAGARRIPLASVG 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++Y AP +M + VF+ ++ T I F + +A+ +Y+ S + K
Sbjct: 248 FLQYVAPTVMFLLGVFLYEESFTTHHMITFLFIWLALAIYIYSIYKQSRRKKA 300
>gi|330956977|gb|EGH57237.1| RarD protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 295
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG+ P+Y + + V +E+I HR LWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLFPIYFKVIAAVPAIEIIIHRALWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NPK + +L S T++A +W +++A+ + S Y++ P+++V L V
Sbjct: 61 GWWRDLRNNPKRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLAMVL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A +L + + H +P +SLA+ +T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVILAAIGVAQQVWHVGSLPWVSLALPLTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + L+L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLALNPMAVSAQPEFWTTTQALWLAAAGPVTLIPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYIAPTLVLLLAVLLYGEHLTTSTIITFAFIWAGLAIYSVDIWLKSR 292
>gi|323492981|ref|ZP_08098118.1| RarD protein [Vibrio brasiliensis LMG 20546]
gi|323312760|gb|EGA65887.1| RarD protein [Vibrio brasiliensis LMG 20546]
Length = 296
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 142/291 (48%), Gaps = 1/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ILWG+ PLY Q+L V+ E+++ R++ S+P + + L
Sbjct: 6 LGNGMAAFSFILWGLLPLYYQYLPNVATDELLAVRLIASVPLGALIVFAVTKRLPQFNAI 65
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +++ F+A ++++ W F +AL + +S +F++P+ ++ LG L ERL+
Sbjct: 66 WADKRSLITTAFAAVVMSISWVAFTWALTNERVMESSLGFFISPIATMALGVFCLGERLS 125
Query: 145 HLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +A L + L +H G IPL++L+IAV +S Y + +K I S F+E VL
Sbjct: 126 LGKKVALALACIGLGYQVIHYGEIPLVALSIAVFFSLYGWLKKKINYEWSTSLFVEALVL 185
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+ Y+ + + G F + IG FS I+ LST+G+M+
Sbjct: 186 LPLAISYLFYKEMTLGTESFHSGMSTLALYIGSAPATLLPLLFFSIAIRLTSLSTIGLMQ 245
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P + + +V++ + D V+ + F + ++ + T+ K++
Sbjct: 246 YIEPSIQFILAVYLFGEAFDEVKLVSFSFIWAGLLFTVFDTLRYRHTAKSR 296
>gi|257791175|ref|YP_003181781.1| hypothetical protein Elen_1423 [Eggerthella lenta DSM 2243]
gi|325832933|ref|ZP_08165606.1| putative membrane protein [Eggerthella sp. HGA1]
gi|257475072|gb|ACV55392.1| protein of unknown function DUF6 transmembrane [Eggerthella lenta
DSM 2243]
gi|325485798|gb|EGC88262.1| putative membrane protein [Eggerthella sp. HGA1]
Length = 520
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/292 (9%), Positives = 81/292 (27%), Gaps = 11/292 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + I WG + Q L + R++ + F +
Sbjct: 16 NRHVVRGIVCALAGGICWGFSGTCAQLLMNDYGAPATWITCVRMVIAAVF-FLFLTAVRN 74
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+ + F+ + + ++ A+ + + V V+ +
Sbjct: 75 WRDLVAVFRDWRSLAQIAAFAIFGVLLTQLSYLNAISYTSAGVGTTIEQVGLVLIMLYVC 134
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIP 189
V K + + + +LI+ I L+ + + + +
Sbjct: 135 VRAKRLPRAREAAGLVFALGGMLIIATQGEIDQLAIPAEGLAWGLVSAVALTFYTLMPVR 194
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
V G + + + L + + + ++
Sbjct: 195 VLKKWGSMLVTGLAMLFGGSAASVVVQPWTMPVNLPLGGIAALVAIVIVGTLGAYMLYLQ 254
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G+ A ++ P+ ++ ++ L P+ ++VI + +
Sbjct: 255 GVNDAGPVKASLLCCVEPVSAMILALAWLHTPVSGWDLAGCALIVIMIFLVT 306
>gi|330791537|ref|XP_003283849.1| hypothetical protein DICPUDRAFT_45078 [Dictyostelium purpureum]
gi|325086235|gb|EGC39628.1| hypothetical protein DICPUDRAFT_45078 [Dictyostelium purpureum]
Length = 616
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 91/300 (30%), Gaps = 26/300 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + + L+ I + + ++S LE+ R ++ L + K
Sbjct: 323 QGLILLVLSAFLFSIMAFIVKKISTELSSLEIAFFRSVYGLIACILILYSIRDNPLGPKQ 382
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + Y + F +PVI+ L +V LKE+
Sbjct: 383 FRLFLSLR------GLSGTISLVAYFYTINVLPLSEAVIISFTSPVITAALAAVLLKEKW 436
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + A L + + I++ S + +A K + + G V
Sbjct: 437 GPIEALCAFLSLCGVTIISKPSFLFHNHGDGDTAGNAQNDPSKLLYIFIGIGGAFFTAVS 496
Query: 204 AIP-------------------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
I + + F ++ ++ G+L +
Sbjct: 497 YIAVRKVGPTVNPFILVNYFSAIAVIITLPSSFIFQFFKWPSLSTWGYITLMGVLGTIAQ 556
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ GI+ K + M Y + + + L + ID + + G+++ +
Sbjct: 557 GAVNRGIQLEKAAKAAAMNYLQIIFTFIWGIAFLGEKIDWITFLGAGLILSCAGITAFRK 616
Score = 42.2 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 46/133 (34%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ ++ + + S+E +E+ LG LFL
Sbjct: 328 LVLSAFLFSIMAFIVKKISTELSSLEIAFFRSVYGLIACILILYSIRDNPLGPKQFRLFL 387
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
GL + + Y I LS I+ +T+P++ + +LK+ + + +
Sbjct: 388 SLRGLSGTISLVAYFYTINVLPLSEAVIISFTSPVITAALAAVLLKEKWGPIEALCAFLS 447
Query: 294 VIAMVVYLLPTVI 306
+ + + P+ +
Sbjct: 448 LCGVTIISKPSFL 460
>gi|83944904|ref|ZP_00957270.1| rarD protein [Oceanicaulis alexandrii HTCC2633]
gi|83851686|gb|EAP89541.1| rarD protein [Oceanicaulis alexandrii HTCC2633]
Length = 311
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 5/290 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L F Y +WG++P++ +FL + E++ RV+WS P + + L
Sbjct: 19 LAAFSGYFIWGLSPIFYKFLAFANPTEIVLQRVVWSAPILLAILYVSRRLGPALAVLNDR 78
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ ++ S + +W +I+++ + S Y++ P+++V +G +ER + L+
Sbjct: 79 KTLLVLVCTSLL-IGTNWWVYIFSVNSGHVLEASLGYYINPLMNVAVGVFVARERFSRLR 137
Query: 148 IIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
IA L +L ++ + G P+L+L +A +++AY + RKTI V + G F E ++AIP
Sbjct: 138 AIAIGLAVLGVINQIVTVGHLPVLALFMAGSFTAYGYVRKTIQVDARVGLFWETLIMAIP 197
Query: 207 ALFYVVWNGFSGGEH--FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+L + GGE+ F + + L+ G + +F G + + +G++++
Sbjct: 198 SLLVLTVFEIQGGENAGHFFNGPSEAILLMMTGPMTVLPLLLFLTGARGLSFAIIGVLQF 257
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
AP L + + +P F + + V++ + K K
Sbjct: 258 VAPTLQFIVG-LVYGEPFSLAYLATFIFIWSGLAVFVFELLHFERKQKRA 306
>gi|262203296|ref|YP_003274504.1| RarD protein, DMT superfamily transporter [Gordonia bronchialis DSM
43247]
gi|262086643|gb|ACY22611.1| RarD protein, DMT superfamily transporter [Gordonia bronchialis DSM
43247]
Length = 312
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 66/298 (22%), Positives = 134/298 (44%), Gaps = 5/298 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ ++ T GTL AY +WG+ PLY L S E++ +R++W++ +
Sbjct: 1 MTADSHPQATT-GTLCGVGAYSVWGLFPLYFHLLIPASAWEILGNRIVWTMLCCVVVLAA 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
++ L + + + M + +A +W ++ A++T S YF+ P+ +V
Sbjct: 60 LRQ-FGFVRGLLADRRRLAMTAAAGVAIAANWVIYVQAVVTGHVTQASLGYFLNPLFTVA 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPV 190
LG + L+ERL LQ+ A ++ +++ + + + G A + R +
Sbjct: 119 LGVLVLRERLRPLQVAAVVVGLVACIYLAVDDGHVPWIALSLAFSFGLYGLIKNRVGGHL 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ +G E +L PA ++ F TL L+ G+ + +F+
Sbjct: 179 TALQGLTTETVLLTPPAAIMLIVLAVRDESTFTTEGWGHTLLLMSTGVATAIPLLLFAAA 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
R L +VG++++ P+L ++ V IL + + R + FGIV +A+ + + V +
Sbjct: 239 ASRIPLVSVGLLQFITPVLQLICGVAILGEHLSPGRWVGFGIVWLALALLSIDAVREA 296
>gi|153955380|ref|YP_001396145.1| transporter protein [Clostridium kluyveri DSM 555]
gi|219855796|ref|YP_002472918.1| hypothetical protein CKR_2453 [Clostridium kluyveri NBRC 12016]
gi|146348238|gb|EDK34774.1| Predicted transporter protein [Clostridium kluyveri DSM 555]
gi|219569520|dbj|BAH07504.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 300
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/295 (24%), Positives = 148/295 (50%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +G ++ AY LWGI P+Y + ++ V +E++++R++W+L + I
Sbjct: 1 MNNQKTVGVIYAAAAYTLWGILPVYWKMIDSVFSMEILANRIVWALVFMILIITVTKK-W 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LK K + + ++ ++ ++WG +I+A+ + + S Y++ P+++V LG V
Sbjct: 60 DELKRIAKYKGQMLYIFIASILITINWGLYIWAVSSDKIVDASLGYYINPLLAVALGVVI 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
KE+L++ A ++ + ++I T+ G IP +SL +A++++ Y +K++ S G
Sbjct: 120 FKEKLSYWTGAALIVAFVGVIIKTIQYGKIPWISLGLAISFALYGAIKKSVKASSIIGLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E ++ A Y+ SG F L LIG G++ + +F+ G KR LS
Sbjct: 180 LETAIITPAAAIYIALRHVSGVGAFETQGTLVILLLIGGGVVTAIPLLLFASGAKRLPLS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G +Y +P + + +F+ + V I F + +A+ +Y + + K
Sbjct: 240 LIGFTQYISPTISLAIGIFVYNEGFTAVDMIAFCFIWVAITIYSFSQMSLAKSLK 294
>gi|298529821|ref|ZP_07017224.1| RarD protein, DMT superfamily transporter [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511257|gb|EFI35160.1| RarD protein, DMT superfamily transporter [Desulfonatronospira
thiodismutans ASO3-1]
Length = 311
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 80/295 (27%), Positives = 153/295 (51%), Gaps = 4/295 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+N+ + G L A+ LWGI P+Y + L V E++ HR+LWS V +
Sbjct: 15 DNSFSNSWGGLLAGMGAFTLWGILPVYWKGLSTVPAAEILCHRILWSFVFVAVFLTLSRR 74
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L++ K+V +L S+ +L+++W +I+ + S Y++ P+++V LG
Sbjct: 75 -WPEVSSLLRSRKSVLLLGLSSLMLSINWLTYIWGVNAGFVIEASLGYYINPLVNVLLGC 133
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ ++RL LQ++A LL +L + + G P ++L +A T++AY RK + S G
Sbjct: 134 LVFRDRLRPLQVMAILLAAAGVLNIVFNYGQVPWIALVLAFTFAAYGLIRKVVRTESLPG 193
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++E +++ PAL +++ + G + + LIG GL+ S +F++ +R +
Sbjct: 194 LWLETAIISGPALIFLLLSPGRGSFAAM--GLQIDILLIGAGLITSLPLLLFAFSARRLR 251
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L VGI++Y AP +M + + + K+P R I F + +++Y+ ++ K
Sbjct: 252 LVEVGILQYIAPTMMFLLGLLVFKEPFSPARLISFIFIWAGIIIYMCESIWFLKK 306
>gi|329768449|ref|ZP_08259940.1| RarD protein [Gemella haemolysans M341]
gi|328836782|gb|EGF86432.1| RarD protein [Gemella haemolysans M341]
Length = 305
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 65/295 (22%), Positives = 135/295 (45%), Gaps = 4/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T + + Y WG+ P+Y + L+ + EV++ R+L S + + ++
Sbjct: 2 NNTQKSLVAILICYFSWGLFPIYFKLLKSIGAYEVLAMRILCSFIFMILVVGIAKNKKTI 61
Query: 81 L---KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K N K+ +LV ++ ++ +W +I A+ T SF Y++ P++++ L V
Sbjct: 62 FEEIKKIWDNKKSFLLLVLASFLITGNWLTYIIAVNTNHVLEASFGYYLNPIVTIILAVV 121
Query: 138 FLKERLNHLQIIA-ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FLKE+L Q IA + L + +P +S+ +A+T+ Y +K I +
Sbjct: 122 FLKEKLTRTQTIACLFVGGSLLYLFISLGSLPWISIMLALTFGLYSLCKKKIILSPKASL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE +++ A+ Y+ + + F ++L+ G++ + +F+ G L
Sbjct: 182 LIETAIVSPIAIIYMGYLASNNSVTFHTFGTDTLIYLLLSGVITAVPLMLFAKGATDIPL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+GI++Y P + +F+ + + + I F I+ +A+ V+ V++ K
Sbjct: 242 YMLGILQYLPPTMQFFIGIFVYGEELSVQKLISFSIIWVAVAVFCYSAVVSMKKQ 296
>gi|301064342|ref|ZP_07204771.1| protein RarD [delta proteobacterium NaphS2]
gi|300441518|gb|EFK05854.1| protein RarD [delta proteobacterium NaphS2]
Length = 295
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 2/292 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G A+ WG+TP Y + + VS LE++SHR++WS + ++ +
Sbjct: 3 QDQKTGFFLGVSAFTFWGLTPFYFKAISSVSPLEIVSHRIVWSTFILAGFLLIINRKFLK 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + +AT+LAV+W +IYA++ + S YF+ P+I+V L ++ LK
Sbjct: 63 TALLQLKRHGLILGL-AATLLAVNWLTYIYAVVNDRILEASLGYFINPLINVALAALILK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L+ +Q+IA L + + G P L+L +A T+ Y RK + +G SEG IE
Sbjct: 122 EKLSRIQMIAVFLAAVGVSQEIFRFGQIPTLALIMAGTFGIYGLIRKKVDIGGSEGLLIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L A Y+ + F + + L+ GL+ + F KR S V
Sbjct: 182 TLLLMPFAAGYLFYLSSENRMAFLSQSPLISWLLLSAGLVTTLPLIWFIGATKRLNYSIV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G+M+Y AP LM + +I + R + F +V +++ ++ T+IN
Sbjct: 242 GLMQYIAPTLMGLLGYWIYSEGFPPGRLVTFTLVWSGLLLVVIETLINVRTR 293
>gi|21233339|ref|NP_639256.1| hypothetical protein XCC3916 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66770301|ref|YP_245063.1| hypothetical protein XC_4004 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21115172|gb|AAM43138.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575633|gb|AAY51043.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 302
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 3/299 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L ++LWG+ PLY L+ V L++I HR++WS V +V SG L
Sbjct: 5 SPVEARRGLLITASTFVLWGVIPLYWHVLKAVPSLQIIGHRIVWSALLVVAWLVATSG-L 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+ ML S+ +A +WG +I+A+ +S YF+ P++SV LG V
Sbjct: 64 RWWRTIAAQPRALAMLAGSSVAIAFNWGLYIWAINAGHVIESSLGYFINPLLSVLLGVVV 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL LQ +A L +L +TL +G P ++L +A ++ Y RK + V G
Sbjct: 124 LKERLRRLQWVAVACAALGVLWLTLDAGAPPWIALGLASSFGLYGLLRKLVAVDPVAGLG 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PAL V W + G F T ++ G++ + F+YG++R L
Sbjct: 184 VESVYLFVPALLLVGWGEYGHGGGFIGSWSLGTDAMLIFGGVVTALPLIGFAYGVRRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S VGI++Y AP L ++ V+ +P D R I F + + +++++ +V + + +
Sbjct: 244 SLVGILQYIAPSLQLLLGVWFFHEPFDPGRAIGFAAIWLGLLLFVGDSVWRARRPAASR 302
>gi|83592045|ref|YP_425797.1| RarD protein [Rhodospirillum rubrum ATCC 11170]
gi|83574959|gb|ABC21510.1| RarD protein [Rhodospirillum rubrum ATCC 11170]
Length = 310
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 76/293 (25%), Positives = 142/293 (48%), Gaps = 3/293 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + + G AY +WGI+PL+ + + +VS LE++SHRVLW++ + +
Sbjct: 11 SPSPAGSSARGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITL-GLR 69
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G L+ L N + +++ + ++++W FI+A + S Y++ P+++V LG
Sbjct: 70 GELAASLRFLANRRVFLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLG 129
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L E ++ Q +A L + I +P +SL +A T++ Y RKT+ V
Sbjct: 130 RLVLGEEMSRRQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLA 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY-GLLNSFVFCIFSYGIKR 253
G FIE +L+ + + W GG F + G L + F++ +R
Sbjct: 190 GLFIEALLLSPVLIGLLAWIELKGGGLAFFDGPWGRSLWLMALGPLTAVPLFFFTWAARR 249
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+LST+G+++YT P + + + K+P+ T + FG + + +YL P
Sbjct: 250 LRLSTLGVIQYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALYLWPVRK 302
>gi|227497555|ref|ZP_03927783.1| DMT superfamily drug/metabolite transporter [Actinomyces
urogenitalis DSM 15434]
gi|226832978|gb|EEH65361.1| DMT superfamily drug/metabolite transporter [Actinomyces
urogenitalis DSM 15434]
Length = 288
Score = 96.1 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
Y++WG PLY + L LEVI +R++++ +V + + L++P+ +
Sbjct: 2 ATYLIWGAFPLYFKLLAAAGALEVIGYRIVFTAAT-CLVLVSVTRSWPKVAAVLRSPRQL 60
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
G + S ++ ++W ++Y + + + YF+ P+++V L + L ERL Q +A
Sbjct: 61 GTFIASGLLITLNWLTYVYGVNSGHAADAALGYFINPLVTVALAAAVLGERLRRYQGVAI 120
Query: 152 LLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
L L++++M + G P +SLA+A+T+ Y + + G +E V+ L Y
Sbjct: 121 GLAGLAVVVMVVMQGTLPWISLALALTFGLYGLVKHEATADALTGLTVESLVVTPLGLGY 180
Query: 211 VVWNGFSGGEHFFL--GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+VW +GG G+ + L+ G + + +F+ G + L+TVG++++ +P+
Sbjct: 181 LVWLAATGGSVLQGAEGSAGLAVLLVAAGPVTAVPLLLFASGARDVPLTTVGLVQFVSPI 240
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ + + + + I R +V +A++V+ V+ + + +
Sbjct: 241 IQFLMAWAVFHEEISAGRWTAMVLVWVAVLVFCADLVLQARRRPRVR 287
>gi|281415560|ref|ZP_06247302.1| rarD protein [Micrococcus luteus NCTC 2665]
Length = 339
Score = 96.1 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G F AY +WG+ PLY L LE++ R+ ++L + L L
Sbjct: 39 RGLALGFTAYFVWGLLPLYMAVLAPAGALEIVVVRIGFALIFCLVLLGLMRR-LGELGTA 97
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L P G +A +AV+W + ++ T S YF+ P+++V LG +FL ERL
Sbjct: 98 LATPGRWGATALAAGFIAVNWLLYAVSVTTGNVLQASLGYFMNPLVNVLLGVLFLGERLR 157
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEGFFIEMC 201
Q +A + + ++++M+ G + R PV + E
Sbjct: 158 RGQWVAVGIAVAAVVVMSAAMGQVPWIALGLATSFGLYGFVKKRFPSPVHAVTAMTAETV 217
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + V +G + G G++ + +FS + L+T+G+
Sbjct: 218 VLIPVFVVGSVLLAQAGLLTTVTEGPAHFWLMAGLGVVTAVPLILFSAAARSLTLTTLGM 277
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++YTAP+L + +V +L + + R FG++ +++ V+ + + S ++
Sbjct: 278 LQYTAPILQFLVAVTVLGEQMPAARWAGFGLIWLSLAVFTVDQLNASRLHRRA 330
>gi|300858797|ref|YP_003783780.1| hypothetical protein cpfrc_01380 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686251|gb|ADK29173.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302206502|gb|ADL10844.1| Putative membrane protein [Corynebacterium pseudotuberculosis C231]
gi|302331057|gb|ADL21251.1| Putative integral membrane protein [Corynebacterium
pseudotuberculosis 1002]
Length = 294
Score = 96.1 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 154/291 (52%), Gaps = 4/291 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L+ F AY+LWG+ P Y L + LE+I+HR++W+ + AI L +L
Sbjct: 1 MLYGFLAYLLWGLFPAYFPLLLPAAPLEIIAHRIIWTGVVMALAITATKKWRELRDASLA 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +A ++A +W ++ A+ ++ + YF+ P++SV LG VFL ERL L
Sbjct: 61 TWLRIAI---AAILIAANWLIYVIAVNSQHVADAALGYFINPLVSVLLGVVFLAERLRKL 117
Query: 147 QIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q ++ ++ +++L++++ G P++SL +A ++ Y +K +P+ S E +L
Sbjct: 118 QTLSVIVATIAVLLLSIVGGHVPVISLLLAASFGFYGLVKKGLPLSPSASLAAETLILMP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL YVV+ +G FF + LI GL+ + +F K LST+G+++Y
Sbjct: 178 VALVYVVYLESTGVGTFFSHGSAHSALLISAGLVTAIPLLLFGIAAKLIPLSTIGMLQYM 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P ++ +VF++ + +DT+R + F I+ I++ +YL + K K +
Sbjct: 238 TPTFQMLWAVFVVNEQLDTIRWVGFVIIWISVGIYLTDLALWRKKAKKISA 288
>gi|260905099|ref|ZP_05913421.1| putative integral membrane protein (rarD protein) [Brevibacterium
linens BL2]
Length = 304
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 81/292 (27%), Positives = 142/292 (48%), Gaps = 4/292 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + AY+LWG+ PL LE++SHRV+WSL ++ F+GG +
Sbjct: 13 RRAGLINGLSAYLLWGLIPLLFAAATPTGALELVSHRVVWSLLF-CAVLLVFTGGFARTW 71
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+++ + ML +A ++A++W FIY + T S Y++ P+IS+ LG +FL E+
Sbjct: 72 QVVRSGRTFWMLTLAAVLIAINWTAFIYGVETGHLVEVSLGYYLNPLISIGLGVIFLGEK 131
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIE 199
L LQ AA +++++I+ L G I+ + VG+ EG IE
Sbjct: 132 LRPLQWTAAGFGLIAVIIVGLGLGRMPYLSFTVAISFGLYGLVKNKVGNQVGALEGMTIE 191
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VLAIP+ Y++ G G F + ++ G + +FS +R LS V
Sbjct: 192 SAVLAIPSAAYLLILGAMGLSTFTGLGAGHVIIILITGPATAIPLILFSAAARRIPLSWV 251
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G+++Y P + ++ V+IL + + R + F ++ IA+++ + S +
Sbjct: 252 GMLQYITPTMQFITGVYILGESMSMTRWVGFFVIWIAVLLLCTDLIRQSRRR 303
>gi|86357056|ref|YP_468948.1| hypothetical protein RHE_CH01418 [Rhizobium etli CFN 42]
gi|86281158|gb|ABC90221.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 304
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 96/289 (33%), Positives = 167/289 (57%), Gaps = 3/289 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P Y + + + EVI+HR++WSLP +V + ++
Sbjct: 15 SPRGFAFALTAYLLWGFLPFYMKAVAHIPPAEVIAHRIVWSLPLAGIVLVLLGRT-ADIR 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A+++ V+WG +++A+ + YF+ P+ S+FLG+V LKE+
Sbjct: 74 AALRSPRMLAMGALTASLITVNWGTYVWAIGAGHSLDAALGYFINPLFSIFLGAVLLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A L L++ I+ L GIP ++L +AV+W Y RKT+P+G ++GFF+E+
Sbjct: 134 LQPLQIAAIALAALAVAILALDSGGIPWVALTLAVSWGFYALLRKTLPLGPNQGFFLEVL 193
Query: 202 VL-AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L ++ + SG HF+ + DT+ L+G G++ + I++ G K KLST+G
Sbjct: 194 ILSGPAVVYILYLEYGSGAGHFYRTGLADTILLLGCGVVTAVPLMIYANGAKLLKLSTIG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IM+Y AP ++ + +VF ++P+ T R I F ++ + +Y + S
Sbjct: 254 IMQYIAPTMIFLIAVFAFQEPLGTARMIAFPLIWAGLFLYSWSMLKGSR 302
>gi|320158342|ref|YP_004190720.1| RarD protein [Vibrio vulnificus MO6-24/O]
gi|319933654|gb|ADV88517.1| RarD protein [Vibrio vulnificus MO6-24/O]
Length = 299
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 70/296 (23%), Positives = 145/296 (48%), Gaps = 1/296 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G + ++++WG+TP+Y + + + E+++ RV+ S+P + + +G L
Sbjct: 2 KTTSYGNIMAAISFLIWGLTPIYYRLMPSAQMDELLAMRVIASVPVGLVLVYFITGKLPE 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +++ + +A ++ + W F +AL + S +F++P++ V LG + LK
Sbjct: 62 FRRVWHDKRSLLYTLIAALLMCISWSTFTWALTNDRVIDASLGFFISPLMMVALGVLVLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ + +A + L L +H G IP ++L + V ++ Y F +K I S F E
Sbjct: 122 ETLSSGKKLAIIFAALGLGYQIVHYGEIPYVALTMGVFFTLYGFCKKKIAYDWSTTLFFE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+LA A Y+ G ++ L +G G + +S I+ ++ +
Sbjct: 182 ALLLAPVASIYMAMKYAQGDAVSLSSDLSTLLLYLGSGPVTIAPLIFYSIAIRYTNMTNI 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
G+M+Y P L + +VFI + D V+ + FG++ +++ + T+ N K ++ +
Sbjct: 242 GLMQYIEPTLQFLLAVFIFAEYFDQVKMVSFGLIWFGLLLTIAETLANRAKRRSVR 297
>gi|331699297|ref|YP_004335536.1| RarD protein, DMT superfamily transporter [Pseudonocardia
dioxanivorans CB1190]
gi|326953986|gb|AEA27683.1| RarD protein, DMT superfamily transporter [Pseudonocardia
dioxanivorans CB1190]
Length = 310
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 66/293 (22%), Positives = 135/293 (46%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G A LWG+ P + + +E+++ R++W+ +F + + G L
Sbjct: 21 RGIAAAVVANTLWGLLPAFWAAMAPAGPVEILAQRIVWTTLIMFGVLTFVHGWGELRGLR 80
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + A ++ ++WG FI A+ + YFV+P++SV LG L+ERL
Sbjct: 81 ARTWS---AIATGALLITLNWGGFIVAVQLGWVLDAALGYFVSPLVSVLLGVFVLRERLR 137
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A + +++ ++ + +G P +++ ++V++ Y +KT+PVG++ G E VL
Sbjct: 138 PAQWVAVAVGAVAVAVVAIENGRIPWIAIVLSVSFGLYGLIKKTVPVGATAGLTAEGIVL 197
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V +G F ++ G ++ G +R L+ G++
Sbjct: 198 GPIALTVAVVLVVTGHGTFATHGAGHAALMVASGFATVAPLLLYGIGARRVPLTVTGLLM 257
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
Y P+L + +V + + + R I FG+V +A+ V+ + + + + +
Sbjct: 258 YVNPVLQFLYAVVVAHEDMPAGRWIGFGLVWVALAVFSVDMLHTDRRRRATAA 310
>gi|119478735|ref|ZP_01618593.1| chloramphenicol-sensitive protein RarD [marine gamma
proteobacterium HTCC2143]
gi|119448364|gb|EAW29618.1| chloramphenicol-sensitive protein RarD [marine gamma
proteobacterium HTCC2143]
Length = 299
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 84/298 (28%), Positives = 151/298 (50%), Gaps = 5/298 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ T+ G F AY+ WGI P+Y + ++ VS +E++ HRVLWS+ + +VY
Sbjct: 2 SQMFEKSTIQGAYFALTAYVFWGILPIYFKAVDHVSAIEILVHRVLWSVVFLLGVLVYTG 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L K +L FSA ++A +W IY ++ TS YF++P++SVFLG
Sbjct: 62 QLDRLRLPPRKLG----LLFFSALLIAANWLLSIYGIVNDNIVETSLGYFISPLVSVFLG 117
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ERL LQ +A + + ++ G IP ++L++A ++ Y RK + + S
Sbjct: 118 VIFLGERLRPLQWVAIFIAFFGIFFQLMYFGKIPWIALSLAFSFGFYGLIRKNLNLHSVA 177
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G +E ++ ALF + W G F + ++ L L+ G++ S FS I +
Sbjct: 178 GLALETLMMVPFALFALFWIYEKGQLQFGVADLNTNLLLVSAGVVTSIPLLCFSAAITKI 237
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
L+ G+ +Y AP + +V ++ + +P R I F + +A+ ++ +++ + +
Sbjct: 238 SLTASGMFQYLAPSISLVIALVMYGEPFGLDRLITFSCIWLALTIFTTEMLLHHRRKQ 295
>gi|171915839|ref|ZP_02931309.1| RarD protein, DMT superfamily transporter [Verrucomicrobium
spinosum DSM 4136]
Length = 319
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 72/303 (23%), Positives = 143/303 (47%), Gaps = 2/303 (0%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA 70
++ L+ + + L A+ LWG+ P+Y + V +++HR +W
Sbjct: 17 AQPLAPQAHASEPPRAVLAAVTAFFLWGVLPVYWKATVSVGSTVIVAHR-VWGTILFLIP 75
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
++ G L LK+P+ + + ++A +L +W FI+A + S YF+ P++
Sbjct: 76 LLRSRGELGAWVAALKSPRLLWVHGWAALLLTANWSLFIWANQHGRIVEASVGYFLNPLL 135
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIP 189
+V +G +FL ERL LQI++ L L +L+ + G P ++L +A T+ Y R+ P
Sbjct: 136 NVLIGFLFLGERLTRLQIVSVSLAALGVLLQVVILGHFPWIALLLASTFGVYGLVRRKSP 195
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+GS G +E ++ AL ++ W G + G + ++G G+ + F+Y
Sbjct: 196 LGSLTGLALETVLVLPFALGWLAWCHLQGQPLWGGGTPLEVGLVVGAGVATALPLLTFAY 255
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + ST+G++++ AP + + +P+ + FG + + V+ L
Sbjct: 256 AARQLRFSTLGLLQFIAPTGQFLIGALLYHEPVTAGALMSFGCIWAGVAVFCLEAFGKRS 315
Query: 310 KNK 312
+K
Sbjct: 316 GSK 318
>gi|261253164|ref|ZP_05945737.1| RarD protein [Vibrio orientalis CIP 102891]
gi|260936555|gb|EEX92544.1| RarD protein [Vibrio orientalis CIP 102891]
Length = 296
Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 134/287 (46%), Gaps = 1/287 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G +++LWG+ PLY QFL + E+++ R++ S+P ++ + L
Sbjct: 2 SEQRLGNGMAAFSFLLWGLLPLYYQFLPNAATDELLAIRLIASVPFGAAIVLLITKRLPN 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + +++ ++ ++++ W F +AL + S +F++P+ + LG FLK
Sbjct: 62 FKAIWADKRSLMYSTAASLMMSMSWCAFTWALTNDRVMDASLGFFISPITMMTLGIFFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ + +A +L + L +H G P ++L +A+ ++ Y + +K S G F+E
Sbjct: 122 ESLSIGKKVALVLACIGLGYQIIHYGEVPYIALTMAIFFTFYGWCKKKANYDWSTGLFVE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL AL Y++ ++ G IG +S I+ LST+
Sbjct: 182 ALVLLPLALGYILLKEWTVGTESLHSGAMTLALYIGAAPATLLPLVFYSIAIRLTTLSTI 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
G+M+Y P + +V++ + D V+ I F + ++ + ++
Sbjct: 242 GLMQYIEPTIQFFLAVYLFGEAFDEVKLISFTFIWAGLIFTIFDSLR 288
>gi|309812412|ref|ZP_07706167.1| protein RarD [Dermacoccus sp. Ellin185]
gi|308433717|gb|EFP57594.1| protein RarD [Dermacoccus sp. Ellin185]
Length = 305
Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 64/289 (22%), Positives = 138/289 (47%), Gaps = 4/289 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
GT++ F AY+ WG+ PLY LE E++SHR + + ++ + L L
Sbjct: 4 EQRQGTIYGFLAYLAWGLFPLYFHALEPAGAWEILSHR-ILWTLLLCLVLLAITRNLGFL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ + +G + +A ++A +W ++ A+ + + YF+ P+++V LG + L E
Sbjct: 63 GGLFRDARRLGAITIAALLIAANWTIYVVAVTSGHVTEAALGYFLNPLVTVMLGVLVLGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFI 198
+L LQ +A + +++ + + + G P ++ R + + EG
Sbjct: 123 KLRRLQWLAVAIGVVACVYLAIDYGSPPWISISLALSFAAYGLMKKRIGGHLSALEGLTA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E VLA A +++ S + + ++ L G+ + +F+ +R L+T
Sbjct: 183 ETVVLAPLAAALLLFVLPSKDLTWSGHGVSHSVLLAFSGVATAIPLLLFAAAARRIPLTT 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+G++++ P++ ++ V +L + I R + FG+V +A+V L ++ +
Sbjct: 243 IGLLQFMTPIMQLLCGVLVLGEHISAGRWVGFGLVWLALVALTLDSLQH 291
>gi|220913537|ref|YP_002488846.1| RarD protein, DMT superfamily transporter [Arthrobacter
chlorophenolicus A6]
gi|219860415|gb|ACL40757.1| RarD protein, DMT superfamily transporter [Arthrobacter
chlorophenolicus A6]
Length = 344
Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 4/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G LF AY LWG+ PLY L+ +E++++RV+WSL +
Sbjct: 39 KDTTAGILFGIGAYGLWGLLPLYFFVLKPAGAVEIVANRVVWSLLFCALLVTVTR-AWPA 97
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L L+N G L +A ++AV+W + Y + T Q TS YF+ P++SV LG LK
Sbjct: 98 LTAALRNRAVFGSLALAAFLIAVNWLTYTYGVTTNQAVETSLGYFINPLVSVLLGVFVLK 157
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSEGFF 197
E+L LQ A + +++ ++T G A + + R V +
Sbjct: 158 EKLRPLQWAAVAIGFIAVGVLTYSYGKLPWIALTLAFSFGLYGFVKKRVGPRVDAVTSLS 217
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E VLA A + G SG L+ G++ + F +R ++
Sbjct: 218 VETLVLAPFAAAAMAALGVSGAATLTTQGAGHFWLLLASGVITAVPLVFFGASARRLPMT 277
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
T+G+++Y AP+L + ++ + ++ + R I FG+V +A+++ + +
Sbjct: 278 TIGLLQYFAPVLQFIVALVVFREAMTMERWIGFGVVWVALLLLTVDML 325
>gi|239918248|ref|YP_002957806.1| rarD protein [Micrococcus luteus NCTC 2665]
gi|239839455|gb|ACS31252.1| rarD protein [Micrococcus luteus NCTC 2665]
Length = 336
Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G F AY +WG+ PLY L LE++ R+ ++L + L L
Sbjct: 36 RGLALGFTAYFVWGLLPLYMAVLAPAGALEIVVVRIGFALIFCLVLLGLMRR-LGELGTA 94
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L P G +A +AV+W + ++ T S YF+ P+++V LG +FL ERL
Sbjct: 95 LATPGRWGATALAAGFIAVNWLLYAVSVTTGNVLQASLGYFMNPLVNVLLGVLFLGERLR 154
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEGFFIEMC 201
Q +A + + ++++M+ G + R PV + E
Sbjct: 155 RGQWVAVGIAVAAVVVMSAAMGQVPWIALGLATSFGLYGFVKKRFPSPVHAVTAMTAETV 214
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + V +G + G G++ + +FS + L+T+G+
Sbjct: 215 VLIPVFVVGSVLLAQAGLLTTVTEGPAHFWLMAGLGVVTAVPLILFSAAARSLTLTTLGM 274
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++YTAP+L + +V +L + + R FG++ +++ V+ + + S ++
Sbjct: 275 LQYTAPILQFLVAVTVLGEQMPAARWAGFGLIWLSLAVFTVDQLNASRLHRRA 327
>gi|296274045|ref|YP_003656676.1| RarD protein, DMT superfamily transporter [Arcobacter nitrofigilis
DSM 7299]
gi|296098219|gb|ADG94169.1| RarD protein, DMT superfamily transporter [Arcobacter nitrofigilis
DSM 7299]
Length = 295
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 77/292 (26%), Positives = 154/292 (52%), Gaps = 4/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWG-ITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L+ A++ WG ++P+Y + + V+ +E++ +RV++S+ + + Y +S
Sbjct: 2 SNERLGQLYAVFAFLFWGGLSPIYFKEVSSVAPIEILVYRVIFSVITLLPFLFY-KKEIS 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K+ K + L FS ++V+W FI+A+ + S Y++ P+++V G +F
Sbjct: 61 SFLSIIKDFKQLRNLFFSTFFVSVNWLIFIWAITNNRILEASLGYYINPLVNVLFGFLFF 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KER+ Q +A + L++L + G P++SL++AV+++ Y RK I VGS G F+
Sbjct: 121 KERMTKYQYVAIFIATLAILYQLITLGYIPIVSLSLAVSFAMYGMIRKKINVGSIVGLFV 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL-IGYGLLNSFVFCIFSYGIKRAKLS 257
E+ + A+ Y+++ G F + F+ + GL+ +F+ R KL+
Sbjct: 181 EVLLTLPFAIAYLIYIYNEKGIAFGENSGVYVSFMLVLAGLVTVIPLLLFNGAATRMKLA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G +Y AP + + +VFI + + + + F ++ IA+++Y L +
Sbjct: 241 TLGFFQYIAPTVSFLIAVFIYHEEFNIDKLVTFCLIWIALIIYSLDSFSKRR 292
>gi|197286034|ref|YP_002151906.1| hypothetical protein PMI2188 [Proteus mirabilis HI4320]
gi|194683521|emb|CAR44350.1| putative membrane protein [Proteus mirabilis HI4320]
Length = 303
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 2/284 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L C+YILWGITPL+ + L LE+++ R++WS+P + + F + + L
Sbjct: 6 GVLLAICSYILWGITPLFYRLLPGAQPLELLAQRLIWSIP-LLLLVRLFIKNRTRWRAVL 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ +++ M +FS+ +AV W F YAL +Q S YF+ P+ S+ LG +FLKE+LN
Sbjct: 65 QDRRSIFMCLFSSLAMAVSWCTFTYALTHQQVLAASLGYFINPLFSIVLGVIFLKEKLNP 124
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A +LI + G P+L+L + ++ Y RK I FIE L
Sbjct: 125 AEKWAVILICAGVGYQLWMYGQLPILALVMGGAFAIYGLIRKFIRFDVITSLFIETLWLI 184
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ ++W F + + I + F+ IKR L+ +G+ +Y
Sbjct: 185 PVAIGAMIWLIMRDESAFSSADNLTRFYYILTAPVTILPLLFFTAAIKRTTLTVIGLAQY 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P + + +VF+ + D V+ + F ++ + ++ + +
Sbjct: 245 IEPTMQFLLAVFLFHEAFDAVKGVSFSLIWLGLLCCIFALIRKR 288
>gi|242399735|ref|YP_002995160.1| Permease, drug/metabolite transporter (DMT) superfamily
[Thermococcus sibiricus MM 739]
gi|242266129|gb|ACS90811.1| Permease, drug/metabolite transporter (DMT) superfamily
[Thermococcus sibiricus MM 739]
Length = 279
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/285 (10%), Positives = 93/285 (32%), Gaps = 10/285 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + +F A +WG ++ + L Q + + +R L + +
Sbjct: 2 KKGYILIFLAASMWGTLGIFAKLLYQFNLDPFTITFYRTLIAFSILLL-------YNYSN 54
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+K + ++ + + + ++Y + + PV S LG KE
Sbjct: 55 DFQIKRHRLPFYALYGFFAVFLFYILYLYTVKISSVSFAVLLLYSAPVYSTILGYALFKE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ +I+A +++I + + + + V + + E
Sbjct: 115 KITKAKILALIMVIFGV-FLVANLDHWDANKIATVLGLLSGLTYALYGILAKIAVKNEKP 173
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A+ + HF + + +++ ++ ++S I
Sbjct: 174 EEALLYTIGFGALFLAPFSHFKIPYESLPYLFGLAFFPTVLGYILYNKALQEVEVSKASI 233
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ P++ ++ + I ++ + + + +++ ++ +
Sbjct: 234 ISTVEPVVALILAYLIFRETLTPQQIVGAVFIILGSLILHIEEKR 278
>gi|260578066|ref|ZP_05845988.1| integral membrane protein (RarD protein) [Corynebacterium jeikeium
ATCC 43734]
gi|258603806|gb|EEW17061.1| integral membrane protein (RarD protein) [Corynebacterium jeikeium
ATCC 43734]
Length = 291
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 63/276 (22%), Positives = 143/276 (51%), Gaps = 4/276 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ Y++WG+ P + L+ + +E+++HR +W+L + + G L T +
Sbjct: 1 MIWGLLCYLMWGLFPAFFPLLQPATPMEILAHRFVWTLVFMLLLLAALRGFKQLRVITAR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V +A +++V+WG +IYA+ + YFV P++SV LG + L E+L L
Sbjct: 61 QWWIVAA---AALLISVNWGLYIYAVNNNHVADAALGYFVNPLVSVLLGVIVLGEKLRRL 117
Query: 147 QIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q+++ + ++++++T+ P++SL++A ++ Y +K + + + E VLA
Sbjct: 118 QMVSVGIATIAVVVLTVALGSPPIISLSLAFSFGFYGLVKKQVRLTPIQSLTAETLVLAP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L Y+ + G + L+ G++ + F+ + L+++G+++Y
Sbjct: 178 IGLIYLGFLQSQGTNTYVQLGAGHAALLMLAGVVTALPLLCFARAAQEMSLTSLGMVQYI 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P++ ++ +VF+ + I+ R + F ++ IA++V++
Sbjct: 238 TPVIQMLWAVFVNNEHIEPARWVGFVLIWIAVIVFI 273
>gi|317488092|ref|ZP_07946669.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
gi|316912800|gb|EFV34332.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
Length = 512
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/292 (9%), Positives = 81/292 (27%), Gaps = 11/292 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + I WG + Q L + R++ + F +
Sbjct: 8 NRHVVRGIVCALAGGICWGFSGTCAQLLMNDYGAPATWITCVRMVIAAVF-FLFLTAVRN 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+ + F+ + + ++ A+ + + V V+ +
Sbjct: 67 WRDLVAVFRDWRSLAQIAAFAIFGVLLTQLSYLNAISYTSAGVGTTIEQVGLVLIMLYVC 126
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIP 189
V K + + + +LI+ I L+ + + + +
Sbjct: 127 VRAKRLPRAREAAGLVFALGGMLIIATQGEIDQLAIPAEGLAWGLVSAVALTFYTLMPVR 186
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
V G + + + L + + + ++
Sbjct: 187 VLKKWGSMLVTGLAMLFGGSAASVVVQPWTMPVNLPLGGIAALVAIVIVGTLGAYMLYLQ 246
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G+ A ++ P+ ++ ++ L P+ ++VI + +
Sbjct: 247 GVNDAGPVKASLLCCVEPVSAMILALAWLHTPVSGWDLAGCALIVIMIFLVT 298
>gi|317491332|ref|ZP_07949768.1| RarD protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920879|gb|EFV42202.1| RarD protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 308
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 2/288 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G A+ILWGITPL+ + L + LE+++ R+ WS+P + + F + K
Sbjct: 6 GPALAVLAFILWGITPLFYKMLPDANALELLAQRLFWSIPLLLLLRLLFK-NRTTWKQVW 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ +++ + I++V W FIYAL S YF P+ S+ LG +FL ++L+
Sbjct: 65 QDKRSLFCCLLGGAIMSVSWTTFIYALTHNLVLDASLGYFTNPLFSIALGVIFLHDKLSR 124
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q IA L I L + G P+L+LA+ T++ Y RK I +E +
Sbjct: 125 FQRIAVALAITGLAYQIVLLGHIPILALAMGSTFAFYGLVRKFIRYDIMTALTLETLWML 184
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ +W +G + + +F+ IKR L+ +G+ +Y
Sbjct: 185 PLAIAITIWLHMTGSSILAGSGTKTFVLYALTAPVTFAPLLLFAAAIKRTSLTVIGLAQY 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P L + +V +PI + I F ++ + + + + +
Sbjct: 245 VEPSLQFLLAVLAFGEPISMPKMISFSLIWLGLAFCVYELFRQHWRYR 292
>gi|285017080|ref|YP_003374791.1| drug/metabolite transporter superfamily protein [Xanthomonas
albilineans GPE PC73]
gi|283472298|emb|CBA14804.1| putative drug/metabolite transporter superfamily protein
[Xanthomonas albilineans]
Length = 305
Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 3/303 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ A G + LWG+ PLY L+ V +I+HRV+WS V ++Y
Sbjct: 1 MAMSVAEHDLRRGLWMTAATFALWGVAPLYWHLLKAVPSAHIIAHRVVWSAMLVVAWLLY 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ L + P+A+ L FS+ +A +WG +I+A+ +S YF++P+++V
Sbjct: 61 SAR-LQWWRRIAAQPRALVTLAFSSLAIAFNWGLYIWAINAGHVIESSLGYFISPLVNVL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGS 192
LG + L ERL LQ +A L + +T+ +G P ++L +A ++ Y RK V +
Sbjct: 120 LGVLVLHERLRRLQWLAVACAALGVAWLTVDAGTPPWVALGLACSFGLYSLLRKLAHVDA 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN-IPDTLFLIGYGLLNSFVFCIFSYGI 251
G +E L +PAL +V+W G F D + LI G + + F+YG+
Sbjct: 180 VAGLGVESVYLFLPALGFVLWGEAGHGGGFLGAWGWRDDVLLICGGAVTAAPLIGFAYGV 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+R LS +G+++Y +P L ++ V+ +P D R + F + I ++++ +V SG
Sbjct: 240 RRIPLSLIGLLQYISPSLQLLLGVWFFGEPFDADRALGFAAIWIGLLLFAGESVWRSGIG 299
Query: 312 KTK 314
+ +
Sbjct: 300 RRR 302
>gi|326797061|ref|YP_004314881.1| RarD protein, DMT superfamily transporter [Marinomonas mediterranea
MMB-1]
gi|326547825|gb|ADZ93045.1| RarD protein, DMT superfamily transporter [Marinomonas mediterranea
MMB-1]
Length = 294
Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 62/293 (21%), Positives = 126/293 (43%), Gaps = 1/293 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ +G + A+ LW I P+Y + + V E++++R++WS VF I +
Sbjct: 3 STSRVGLFYALSAFTLWAIAPMYFKMMAFVPATEILANRIIWSCVLVFILIAGMRK-WTE 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK L + + L S ++ ++WG FI+A+ Q S Y++ P+IS+ LG VF +
Sbjct: 62 LKRVLTSKNLLLALSLSTVLIGLNWGTFIWAVNANQMLSASLGYYINPLISILLGVVFFR 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++L+ ++ A L +++L+ ++ G + + + S
Sbjct: 122 DKLDRVKQGACALCFVAVLLEVINFGSLPWVALVLALTFGFYGLVRKKIAVDSFTGMALE 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +P + + + + + L G + F+ R L T+G
Sbjct: 182 TALLLPFALLYLMSINTPTSNLLENSFDVNWLLFAAGPVTMVPLMCFAAAANRVSLVTLG 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+Y P M + +VF+ +P+ + + + F ++ A+ + +L TV K
Sbjct: 242 FFQYIGPSGMFLLAVFVYDEPLSSEKLMTFALIWGALALLILDTVRKMRKASR 294
>gi|254464776|ref|ZP_05078187.1| RarD protein [Rhodobacterales bacterium Y4I]
gi|206685684|gb|EDZ46166.1| RarD protein [Rhodobacterales bacterium Y4I]
Length = 303
Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 4/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T +G + + A ++WG++ +Y + L V +V+SHRVLWS ++ +
Sbjct: 2 RDTQLGVMAMIAACVVWGLSGIYYKALSHVPPEQVLSHRVLWSFLFFAGVLLVQGR-IGA 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + + +L S +++++W FI ++ T S Y++ P++SV LG +
Sbjct: 61 LRAAFSDRRGALLLALSTAMISLNWFVFISSVQTGHATEASLGYYIFPLLSVLLGRLVFG 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL Q++A LL ++ +++ G L + A K S G + +
Sbjct: 121 ERLARAQLLAVLLAAAAVAVLSFGLGAAPLIPLVLSVSFALYGVAK---KRLSLGPVVSV 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ L + + G F G+ D L G+L +FS+ KR +L TVG
Sbjct: 178 TAEVLLVLPVALVVIWMTGGAGFFGSPADAAMLAFSGILTGLPLILFSFAAKRVRLGTVG 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+++Y P L + +V + +P F ++ A+ V+ +
Sbjct: 238 VLQYLNPTLQFLVAVLLFAEPFTPWHGAAFALIWCAVAVFSFSALRQ 284
>gi|145296092|ref|YP_001138913.1| hypothetical protein cgR_2014 [Corynebacterium glutamicum R]
gi|140846012|dbj|BAF55011.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 282
Score = 95.7 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 67/285 (23%), Positives = 140/285 (49%), Gaps = 4/285 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ AY+ WG+ P + L +E+++HR+LW+ + I G L
Sbjct: 1 MIYGVIAYLGWGMFPAFFPLLLPAEPIEILAHRILWTAVLMMIIISVTKGWKELKNADRG 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + ++ +A +W ++ A+ + + YF+ P++SV G VF KE+L L
Sbjct: 61 TWLRIVL---ASLFIAGNWLIYVIAVNSGHVTEAALGYFINPLVSVVFGIVFFKEQLRKL 117
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q+ A ++ + +L++T SG P ++A T+ Y +K + + + E VL
Sbjct: 118 QMSAVIIALAGVLVLTFLSGQPPYLALSLAFTFGVYGALKKQVNMSAIGSLTAETLVLLP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ Y++W SG FF L+ GL+ + +F+ K LSTVG+++Y
Sbjct: 178 IAIVYLIWLETSGQGTFFNNGGEHIALLVSSGLVTAVPLLMFALAAKEIPLSTVGMLQYL 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P + ++ ++F++ + ++ +R F + +A+ +Y+ +++ + +
Sbjct: 238 TPTMQMLWALFVVNESVEPMRWFGFVFIWVAITIYITDSLLKNRQ 282
>gi|323698469|ref|ZP_08110381.1| RarD protein, DMT superfamily transporter [Desulfovibrio sp. ND132]
gi|323458401|gb|EGB14266.1| RarD protein, DMT superfamily transporter [Desulfovibrio
desulfuricans ND132]
Length = 310
Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 83/276 (30%), Positives = 146/276 (52%), Gaps = 2/276 (0%)
Query: 37 WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
WG+ P+Y + L V+ E++ HRV+WSL I+ G LK+P+ + +L
Sbjct: 23 WGLLPVYWKGLITVNPFEILCHRVVWSLVF-IAVILTLRRGWGETFSPLKSPRDLLILTA 81
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
S+ ++ +W +I+A+ T TS Y++ P+++V LG VF +ERL LQ +A L L
Sbjct: 82 SSLMIGCNWLLYIWAVNTDHVLETSLGYYINPLVNVLLGFVFFRERLRPLQTVAIGLAAL 141
Query: 157 SLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
+ + G P +SLA+AV++ Y RK V S G F+E VL AL Y++W
Sbjct: 142 GVANSVMAHGELPWISLALAVSFGLYGLLRKIASVESLPGLFLETMVLGPFALGYILWLQ 201
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
G F + L L+G G++ + F+YG +R +L+T+G+++Y +P + + V
Sbjct: 202 AHGASALFHQGLSVDLLLLGAGVVTASPLIGFAYGARRLQLTTLGLLQYLSPSIAFLLGV 261
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ ++P + F ++ ++VY + +V+
Sbjct: 262 YVYREPFTPSHLLTFALIWAGLIVYTVESVLTMRHQ 297
>gi|303286723|ref|XP_003062651.1| Drug/Metabolite transporter superfamily [Micromonas pusilla
CCMP1545]
gi|226456168|gb|EEH53470.1| Drug/Metabolite transporter superfamily [Micromonas pusilla
CCMP1545]
Length = 777
Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/335 (11%), Positives = 94/335 (28%), Gaps = 35/335 (10%)
Query: 2 GKGATKKEYSKGLSKENA-SLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISH 58
G GA K E + S + G + + A +L+G + + + +
Sbjct: 433 GPGAKKDESGFTTDSGSVLSSAFVRGVMAMNLAAVLFGSNQVVIKQVADAGCDDFTQLFF 492
Query: 59 RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGF 118
R ++++ + + L+ ++ L + + I T
Sbjct: 493 RFVFAVIPLVPFLA------EGLESKDRDKLLQNALEVGTVLCVGYILQIIGLDGTTSS- 545
Query: 119 LTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW 178
V++V + + + + A+ + I+ + ++T G P++ AI +
Sbjct: 546 -RGALTSTFTVLTVPIFAQMSGQVVPWYTWPASAIGIVGVGLLTNSGGEPVVGDAICILS 604
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG-------------------- 218
+ S+ F + V +
Sbjct: 605 ATVFGYHTLRSAESAVMFEDLELPFIAWQIAVVCVEAGACKLLSMIYHAHEQGIDATAVF 664
Query: 219 -GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
L P SF I Y ++ +T ++ PL + +
Sbjct: 665 AALPDELAATPWAPIAYMGLFTTSFTLLIEFYALQNISAATAALVYTAEPLWGAAFAWWF 724
Query: 278 LKQPIDTVRTIVFGIVVIAMV---VYLLPTVINSG 309
+ + + +++ + V + V +
Sbjct: 725 MGDRWGPIGWVGSALIIGSSVGSQLLSFDEVKKAK 759
>gi|149913931|ref|ZP_01902463.1| RarD [Roseobacter sp. AzwK-3b]
gi|149812215|gb|EDM72046.1| RarD [Roseobacter sp. AzwK-3b]
Length = 298
Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 63/294 (21%), Positives = 130/294 (44%), Gaps = 1/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + +WG++ +Y + L + +E+++HR LWSL ++ ++L
Sbjct: 2 SEAVKGVTAMVAVCTVWGLSGIYYKLLSHIPPIEILAHRTLWSLIFFAAVLLIQGR-IAL 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L N ++ ++VF+A +++++W FI ++ + S Y+ P+++V LG++ +
Sbjct: 61 VGQALGNRRSAWVIVFAAFMISLNWFVFITSIQIEKAMEASLGYYTFPLVAVLLGAIVFR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL Q +A L +++ +T+ G+ + + K
Sbjct: 121 ERLVRAQQLAVALAAAAVITLTVGLGVAPWIALVLASSFGLYGLAKKGLSVGPVVSVTTE 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ P V+W SGG+ F D+ L G L + +FSY +R +TVG
Sbjct: 181 VLILSPIALVVLWVVHSGGQGAFGTTWRDSALLAFSGPLTATPLILFSYATRRITYATVG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+++Y P L + + FI ++ I F ++ A+ +Y +
Sbjct: 241 LVQYLNPTLQFLVATFIFREAFSFWHAIAFAMIWTALALYTTAAWRQDRAARRA 294
>gi|311695561|gb|ADP98434.1| RarD protein, DMT superfamily transporter [marine bacterium HP15]
Length = 296
Score = 95.4 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 122/288 (42%), Gaps = 1/288 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + AY +WG PL+ E V E++ HR++WS + I ++
Sbjct: 4 ATKGVWYGLSAYTIWGCFPLFFALFEGVPAFEILIHRIIWSCVFLAVVISGLRR-WPAVR 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L NPK + ++ A ++A +WG +IY++ TR S YF+TP+++V LG + L+ER
Sbjct: 63 AALANPKQLWRVLACALLIAANWGIYIYSVETRHVLQASLGYFLTPLVNVALGMLVLRER 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q+ A +L + +LI G + + +
Sbjct: 123 MGPWQMAAVVLAGVGILIQLAMLGELPWISLALAMSFGTYGLVRKQVLLDGLSGLFVETM 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L +P S G F + L+ G++ + +F+ +R +L+TVG +
Sbjct: 183 LLLPVGLLTFGWLASEGMSHFSDSAYIGSLLMASGIVTAIPLLLFAGAARRLRLATVGFL 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P L ++ + +P+ + F ++ IA+ +Y + +
Sbjct: 243 MYINPTLQFFIALLVFGEPLSDAQLTSFVVIWIALGLYSWSSWHYRPR 290
>gi|325568134|ref|ZP_08144575.1| DMT superfamily drug/metabolite transporter [Enterococcus
casseliflavus ATCC 12755]
gi|325158335|gb|EGC70486.1| DMT superfamily drug/metabolite transporter [Enterococcus
casseliflavus ATCC 12755]
Length = 335
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 76/293 (25%), Positives = 149/293 (50%), Gaps = 7/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLL 81
G F AY+LWG+ LY + + VS L + +R++WS + IV L
Sbjct: 38 KGVYFGLSAYVLWGLVTLYWKIIVGVSPLATMCYRIVWSFVFMVLFIVLSGKKTQFLQEA 97
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ KN G++V ++ +++++W FI+A+ + S Y++ P+++V L +VFLKE
Sbjct: 98 RLLWKNKAFAGLIVLASVLISINWFTFIFAVSAGRVMQASLGYYINPLVNVLLATVFLKE 157
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ ++A LL + ++++++ +G IP SL +A ++S Y +K IP+ S G IE
Sbjct: 158 RLSRTGMLACLLASIGVILLSIQTGTIPYASLIMAFSFSTYGLIKKRIPISSVTGLTIET 217
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ AL Y++ G ++ L + G G++ + +F+ K T+G
Sbjct: 218 MVIFPFALVYILGFSTVGFMNYPLQTNLLLM---GAGIVTAIPLLLFAEAAKNVSYITLG 274
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++Y P +M++ ++F+ + + F + + + V+ T+ + K +
Sbjct: 275 FIQYVNPTIMLLLAIFLFHETYSLAQFSAFAFIWLGIAVFTYGTLGTAMKERR 327
>gi|319651854|ref|ZP_08005979.1| chloramphenicol-sensitive protein rarD [Bacillus sp. 2_A_57_CT2]
gi|317396506|gb|EFV77219.1| chloramphenicol-sensitive protein rarD [Bacillus sp. 2_A_57_CT2]
Length = 312
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 72/285 (25%), Positives = 144/285 (50%), Gaps = 4/285 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---LK 82
G L+ AY LWGI P+Y +FL+ V E++++R+ WS + ++ +K
Sbjct: 11 GALYAGFAYFLWGILPVYWKFLDHVQADEILANRIFWSFFFMLMILLASKKWNDFAATMK 70
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
N K + L+ ++ +++ +W +I+A+ Q S Y++ P++SV LG V KE+
Sbjct: 71 GFKTNRKQLYALIIASILISTNWFLYIWAVNNDQMIEASLGYYINPLVSVILGMVVFKEK 130
Query: 143 LNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ Q ++ +LI+T+ G P +++ +A+++ Y A+K I V S+ G +E
Sbjct: 131 LSTAQYLSFGFAFAGVLILTVSYGRFPWIAIVLALSFGLYGLAKKLIKVDSAVGLTLETL 190
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ A Y++ G + F ++ L LIG G + F+ G ++ +S +G
Sbjct: 191 VVTPIAFIYMIILFMDGKQAFLHVSLSSDLLLIGAGAATAVPLLYFAKGAQKIPMSMLGF 250
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++Y AP + ++ +F+ + + + F + +A+ +Y +
Sbjct: 251 LQYIAPTITLILGIFVYHEHFTKLHLLSFMFIWLALTIYSVSRTK 295
>gi|330970903|gb|EGH70969.1| RarD protein [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 295
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ P+Y + + V +E+I HR LWS ++++
Sbjct: 2 QAANPRRGYILGLSAYIIWGLFPIYFKAIAAVPAIEIIIHRALWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIASNWIIYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + H +P +SLA+ +T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFAAIGVAQQVWHVGSLPWVSLALPLTFAFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLALNPTAVSVQPEFWTTTQAIWLAAAGPVTLVPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYVAPTLVLLLAVLLYGEHLTTSTLITFAFIWAGLAIYSVDIWLKSR 292
>gi|289550009|ref|YP_003470913.1| RarD protein [Staphylococcus lugdunensis HKU09-01]
gi|289179541|gb|ADC86786.1| RarD protein [Staphylococcus lugdunensis HKU09-01]
Length = 301
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/298 (24%), Positives = 144/298 (48%), Gaps = 6/298 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG- 76
N+++ G LF A++LWGI P+Y + + +S E++++R++ S+ + I
Sbjct: 2 NSNIEFKKGVLFALGAHLLWGILPIYWRLIGNISAFEILAYRIILSMIFMIIMIYILKQS 61
Query: 77 --GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L P + ++ + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 62 TAFKRDLTHLFATPIQLIAIIVAGYVITLNWGTFIWAVSNGHVLQTSLGYYINPLVSILL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A + + +L MT+ G P++SL +A ++ Y +K + V +
Sbjct: 122 AFIFLKERFNKFESLAIVFAAIGVLYMTIRVGEFPMISLMLAFSFGIYGLLKKLVRVDAM 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G IE V A L Y+++ + L G + +FS G +R
Sbjct: 182 TGIAIECIVTAPAGLIYIIYLWQIHHTSVGINMASFWLLFSGAVT--AVPLILFSAGARR 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
LS G ++Y +P ++ + +F+ K+P D + I F + I + +Y + + +N
Sbjct: 240 IPLSLTGFIQYVSPTIIFLLGIFVFKEPFDIHQFITFIFIWIGIALYSISQYVKMKRN 297
>gi|68164475|gb|AAY87204.1| predicted permease [uncultured bacterium BAC17H8]
Length = 299
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 69/290 (23%), Positives = 134/290 (46%), Gaps = 4/290 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGG 77
+ ++ G ++ A +LWG P+Y +L V +E++ HR LWS + + GG
Sbjct: 1 MVSVSGLVYASLAALLWGFVPVYIGYLSDVDPMEIVVHRALWSGVILLGLVTLAPSLFGG 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + L P+ + + +L+V+W F+YA+ RQ F + YF+ P+++V LG +
Sbjct: 61 LKDARAALTTPRMRFGFLVTCALLSVNWIVFVYAVQARQVFDAALGYFIYPLVTVILGVL 120
Query: 138 FLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L+ERL+ A ++ + + H G+P ++L +A++++ Y RK + V G
Sbjct: 121 MLRERLDRWGWAAVGIVGCGVALKAVHHGGVPWIALVLALSFALYGVTRKRMTVNPVIGM 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F+E L ++ Y+ W +G FF G + + G++ ++ G + +
Sbjct: 181 FVETVFLIPLSVIYLAWRHDAGQTIFFGGGAVNVTLAVFAGVVTVVPLLLYHAGNRALPI 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S ++ Y P +V + +VFG++ + +Y
Sbjct: 241 SVASLLFYINPTTQLVVGLVYFDLVAAPEEWLVFGLIWTGLALYFASRRR 290
>gi|37676212|ref|NP_936608.1| permease [Vibrio vulnificus YJ016]
gi|37200753|dbj|BAC96578.1| predicted permease [Vibrio vulnificus YJ016]
Length = 299
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/296 (23%), Positives = 146/296 (49%), Gaps = 1/296 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G + ++++WG+TP+Y + + + E+++ RV+ S+P + + +G L
Sbjct: 2 KTTSYGNIMAAISFLIWGLTPIYYRLMPSAQMDELLAMRVIASVPVGLVLVYFITGKLPQ 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +++ + +A ++ + W F +AL + S +F++P++ V LG + LK
Sbjct: 62 FRRVWHDKRSLLYTLIAALLMCISWSTFTWALTNDRVIDASLGFFISPLMMVALGVLVLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ + +A + L L +H G IP ++L + V ++ Y F +K I S F E
Sbjct: 122 ETLSPGKKLAIIFAALGLGYQIVHYGEIPYVALTMGVFFTLYGFCKKKIAYDWSTTLFFE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+LA A Y+ G ++ L +G G + +S I+ ++ +
Sbjct: 182 ALLLAPVASIYMAMKYAQGDAVSLSSDLSTLLLYLGSGPVTIAPLIFYSIAIRYTNMTNI 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
G+M+Y P L + +VFI + D V+ + FG++ +++ + T+ N K+++ +
Sbjct: 242 GLMQYIEPTLQFLLAVFIFAEYFDQVKMVSFGLIWFGLLLTIAETLANRAKHRSVR 297
>gi|294101336|ref|YP_003553194.1| RarD protein, DMT superfamily transporter [Aminobacterium
colombiense DSM 12261]
gi|293616316|gb|ADE56470.1| RarD protein, DMT superfamily transporter [Aminobacterium
colombiense DSM 12261]
Length = 301
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 82/277 (29%), Positives = 140/277 (50%), Gaps = 3/277 (1%)
Query: 37 WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
WG+ P Y + L+ + L+++ HR++WSL V + + +K K +G+L+
Sbjct: 20 WGLLPAYWKQLDNLQPLQILCHRIVWSLLFVAMVLTVQRR-WGSVVKAIKTRKTLGLLLL 78
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
S + V+W +I+A+ + + TS YF+ P++SV +FL+E+L+ LQ A +L L
Sbjct: 79 SGLAIGVNWFIYIWAVNSGKVIETSLGYFINPLVSVLFAVLFLREKLSTLQWSAIVLAGL 138
Query: 157 SLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
++L + G P +L+IAV+++ Y RK V S G FIE +L PALFY+
Sbjct: 139 AILYQVILVGRVPFAALSIAVSFALYALIRKVAEVESFPGLFIETLLLVFPALFYLFVGL 198
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
L + + F+YG +R LS +GIMEY AP L +
Sbjct: 199 PEEPFLAGETAQQKIWLLSSGIVTSLP-LICFAYGARRLPLSMLGIMEYLAPTLSFLLGF 257
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
F+ K+P D V+ + F V +A+ ++ ++ + +
Sbjct: 258 FVYKEPFDRVQLLTFVCVWVALALFTGEKLLRWRRMQ 294
>gi|241889288|ref|ZP_04776591.1| protein RarD [Gemella haemolysans ATCC 10379]
gi|241864125|gb|EER68504.1| protein RarD [Gemella haemolysans ATCC 10379]
Length = 305
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/295 (21%), Positives = 139/295 (47%), Gaps = 4/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T L + Y WG+ P+Y + L+++ EV++ R++ S + ++ S+
Sbjct: 2 NNTQKSLLSILVCYFSWGLFPIYFKLLKEIDAYEVLAMRIICSFVFMVIVVMIAKNKKSI 61
Query: 81 LKDT---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + KN K V +LV ++ +++++W +I A+ T SF Y++ P++++ L V
Sbjct: 62 LNEITTLWKNKKRVLLLVLASFLISLNWLTYIIAVNTNHVLEASFGYYLNPIVTIILAVV 121
Query: 138 FLKERL-NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FLKE+L + + + L + +P +S+ +A+++ Y +K I +
Sbjct: 122 FLKEKLTHTQTVACLCVGGSLLYLFISLGSLPWISIILALSFGLYSLCKKKIVLSPKASL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE +++ A Y+ + + F+ ++L+ G++ + +F+ G L
Sbjct: 182 LIETAIVSPIAFIYISYLTANNSLTFYSFGTDTLIYLLLSGVITAVPLMLFAKGATAIPL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+GI++Y P + +F+ + + + I F I+ +A+ + VI+ K
Sbjct: 242 YILGILQYLPPTMQFFIGIFVYGEVLSIQKLISFSIIWVAVAAFCYSAVISMKKQ 296
>gi|218671503|ref|ZP_03521173.1| putative permease protein [Rhizobium etli GR56]
Length = 304
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 100/289 (34%), Positives = 168/289 (58%), Gaps = 3/289 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P Y + L + EVI+HR++WSLP ++ +
Sbjct: 15 SPRGFAFALTAYLLWGFLPFYMKALAHIPPAEVIAHRIVWSLPLAGIVLILLGRT-GDIG 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A+++ V+WG +++A+ + YF+ P+ S+FLG+V LKE+
Sbjct: 74 AALRSPRMLAMGALTASLITVNWGTYVWAIGAGHSLDAALGYFINPLFSIFLGAVLLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A L L++ I+ GIP ++L +AV+W Y RKT+P+G ++GFF+E+
Sbjct: 134 LQPLQIAAIALAALAVAILAFDSGGIPWVALTLAVSWGFYALLRKTLPLGPNQGFFLEVL 193
Query: 202 VLAIPALFYVVWNGFSGG-EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L+ PAL Y+++ FS G HF+ + DT L+G G++ + I++ G K KLST+G
Sbjct: 194 ILSGPALVYILYLEFSSGLGHFYRTGLADTTMLLGCGVVTAVPLMIYANGAKLLKLSTIG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IM+Y AP ++ + +VF ++P+ T R I F ++ + Y + S
Sbjct: 254 IMQYIAPTMIFLIAVFAFREPLSTARMIAFPLIWAGLFFYSWSMLKGSR 302
>gi|188993499|ref|YP_001905509.1| Predicted chloramphenicol-sensitive protein [Xanthomonas campestris
pv. campestris str. B100]
gi|167735259|emb|CAP53473.1| Predicted chloramphenicol-sensitive protein [Xanthomonas campestris
pv. campestris]
Length = 302
Score = 95.4 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 3/299 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L ++LWG+ PLY L+ V L++I HR++WS V +V SG L
Sbjct: 5 SPVEARRGLLITASTFVLWGVIPLYWHVLKAVPSLQIIGHRIVWSALLVVAWLVATSG-L 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+ ML S+ +A +WG +I+A+ +S YF+ P++SV LG V
Sbjct: 64 RWWRTIAAQPRALAMLAGSSVAIAFNWGLYIWAINAGHVIESSLGYFINPLLSVLLGVVV 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL LQ +A L +L +TL +G P ++L +A ++ Y RK + V G
Sbjct: 124 LKERLRRLQWVAVACAALGVLWLTLDAGAPPWIALGLASSFGLYGLLRKLVAVDPVAGLG 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PAL V W + G F T ++ G++ + F+YG++R L
Sbjct: 184 VESVYLFVPALLLVGWGEYGHGGGFIGSWSLGTDAMLIFGGVVTALPLIGFAYGVRRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S VGI++Y AP L ++ V+ +P D R I F + + +++++ +V + + +
Sbjct: 244 SLVGILQYIAPSLQLLLGVWFFHEPFDQGRAIGFAAIWLGLLLFVGDSVWRARRPAASR 302
>gi|296284232|ref|ZP_06862230.1| rarD protein [Citromicrobium bathyomarinum JL354]
Length = 303
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 72/293 (24%), Positives = 146/293 (49%), Gaps = 2/293 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P G AY++WG PLY ++QV E + R++W+LP + F G +
Sbjct: 7 PRPSGLPQALGAYVVWGFMPLYLLLVKQVPAFEFVGWRIVWTLPVCLLIV-AFRGQFPAI 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ L++ +AV +L SA ++A++W +++A+ + + S Y++ P++++ LG++ LKE
Sbjct: 66 REALRDVRAVLVLGASALLIAINWLVYVWAIQQGEVYAASLGYYINPLVNILLGTLILKE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ Q +A L + + I+ +SL +A +++ Y RK +PVG+ G IE
Sbjct: 126 RLSRAQWVAVALAAVGIAILAAGALSTLWISLTLAFSFATYGLLRKQVPVGALPGLTIES 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L IPAL W S F ++ + ++ GLL + +F+ +R S +G
Sbjct: 186 AILLIPALGVAAWYWASPQGSSFDNSLALSFSIMLGGLLTAVPLLMFAIAARRMDYSVLG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+++ AP ++ + + + + + F + +A +++ + +
Sbjct: 246 FVQFLAPSIVFILGLTVFGEELHPAELFCFSCIWLAAAIFVWDLLAKRRAARK 298
>gi|315231442|ref|YP_004071878.1| hypothetical protein TERMP_01680 [Thermococcus barophilus MP]
gi|315184470|gb|ADT84655.1| hypothetical protein TERMP_01680 [Thermococcus barophilus MP]
Length = 282
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 96/288 (33%), Gaps = 10/288 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L VF A +WG ++ + L Q + V+ +RV+ + + S
Sbjct: 2 KRGYLLVFLAASMWGTLGIFAKLLYQFNLDTFTVVFYRVVIAFFLLLI-------YNSSK 54
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+K + + + + + + Y + L + P+ S LG + KE
Sbjct: 55 GLKIKKERLPFYAFYGFFSIFLFYVLYFYTVRISSVSLAVLLLYTAPIHSTILGYLVFKE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + IA ++ + +L + + + LAI + + +G
Sbjct: 115 KVTPTKSIALIMAVSGVLFVVNPNNERISILAIVLGLLSGVTYALYGVLGKMAVRNENPE 174
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L + + + +++ ++ ++S I
Sbjct: 175 EALLYTLGFGALFLIPFSNF-KIPLNAVPYIFALAFFPTFLAYILYNTALREVEVSKASI 233
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P++ ++ + + + + + +++ ++ L +I
Sbjct: 234 IATIEPVVALILAYLVFNEVLTLKQLFGAALIIGGSMLIHLDDIIGKK 281
>gi|254454642|ref|ZP_05068079.1| RarD protein [Octadecabacter antarcticus 238]
gi|198269048|gb|EDY93318.1| RarD protein [Octadecabacter antarcticus 238]
Length = 295
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 76/293 (25%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T+ G F AY+LWG PLY + + + +EV++HRVLWS+P ++
Sbjct: 3 NPKNQDTLRGFGFALSAYVLWGFLPLYLKAVSHIPAIEVVAHRVLWSVPVAGLILIVLGR 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
S L L++PKA+ M +AT+++++WG +++A+ + + Y++ P+ SVFLG+
Sbjct: 63 T-SDLGRILRDPKALAMGCITATLVSINWGVYVWAIAAERTLDGALGYYINPIFSVFLGA 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L E+LN LQ A L ++ ++T +G + K
Sbjct: 122 MLLGEKLNKLQWAAVGLAAAAVGVLTYANGSLPWPALALTFSWGFYAYFKRSLPIGPNQG 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F+ ++ P + G F+ D L+G G++ + +++ G K +L
Sbjct: 182 FLLEVLILSPVALGYLIWLGGQGGGHFVPLTIDMWLLMGCGIVTAVPLMLYANGAKGLRL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+T+GIM+Y AP ++++ +VF+ ++P + R I F ++ A+ +Y
Sbjct: 242 ATIGIMQYIAPTMIMLIAVFVFEEPFGSARAIAFPMIWAALGLYTFAMFRGRK 294
>gi|323488440|ref|ZP_08093687.1| protein rarD [Planococcus donghaensis MPA1U2]
gi|323397947|gb|EGA90746.1| protein rarD [Planococcus donghaensis MPA1U2]
Length = 305
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF---SGGLS 79
+ G L + Y LWG P++ + L V EV++ R++WS IV
Sbjct: 4 SKKGVLVIILTYTLWGFMPIFWKQLAHVPADEVLAARIIWSFILTLVFIVLINGGRQLWL 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK + K +L+ ++ +++ +W F++YA+ + TS Y++ P+IS+ LG++FL
Sbjct: 64 DLKSLWASKKKFFLLMLASFLISANWFFYVYAVSHDRIVETSLGYYINPLISMLLGAIFL 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KE+L+ +A LL +LI+T G P L+L +A +++ Y +KTI + + G I
Sbjct: 124 KEKLSPAVKVAFLLAATGVLILTFSFGSLPWLALGMAFSFAFYGLIKKTIRLDALRGLAI 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + A+ Y V+ F +P L+ GL+ +F +F+ G +
Sbjct: 184 ETLFVFPFAIAYYVYLFSINRVSFLQLGLPTDSLLLASGLITAFPLLLFAIGAPLIPMYM 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+G ++Y AP LM++ VFI + D V+ I F ++ A++++ + + +
Sbjct: 244 IGFLQYIAPSLMLLIGVFIYGESFDVVKIISFSLIWSALILFTSSKFLEARGIRRA 299
>gi|27366505|ref|NP_762032.1| RarD protein [Vibrio vulnificus CMCP6]
gi|27358071|gb|AAO07022.1| RarD protein [Vibrio vulnificus CMCP6]
Length = 299
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/296 (23%), Positives = 145/296 (48%), Gaps = 1/296 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G + ++++WG+TP+Y + + + E+++ RV+ S+P + + +G L
Sbjct: 2 KTTSYGNIMAAISFLIWGLTPIYYRLMPSAQMDELLAMRVIASVPVGLVLVYFITGKLPE 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +++ + +A ++ + W F +AL + S +F++P++ V LG + LK
Sbjct: 62 FRRVWHDKRSLLYTLIAALLMCISWSTFTWALTNDRVIDASLGFFISPLMMVALGVLVLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ + +A + L L +H G IP ++L + V ++ Y F +K I S F E
Sbjct: 122 ETLSQGKKLAIIFAALGLGYQIVHYGEIPYVALTMGVFFTLYGFCKKKIAYDWSTTLFFE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+LA A Y+ G ++ L +G G + +S I+ ++ +
Sbjct: 182 ALLLAPVASIYMAMKYAQGDAVSLSSDLSTLLLYLGSGPVTIAPLIFYSIAIRYTNMTNI 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
G+M+Y P L + +VFI + D V+ + FG++ +++ + T+ N K ++ +
Sbjct: 242 GLMQYIEPTLQFLLAVFIFAEYFDQVKMVSFGLIWFGLLLTIAETLANRAKRRSIR 297
>gi|66047922|ref|YP_237763.1| RarD protein [Pseudomonas syringae pv. syringae B728a]
gi|63258629|gb|AAY39725.1| RarD protein [Pseudomonas syringae pv. syringae B728a]
Length = 295
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 138/292 (47%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ P+Y + + V +E+I HR LWS ++++
Sbjct: 2 QAANPRRGYILGLSAYIIWGLFPIYFKAIAAVPAIEIIIHRALWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIASNWIIYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + H +P +SLA+ +T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFAAIGVAHQVWHVGSLPWVSLALPLTFAFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLAINPTAVSVQPEFWTTTQAIWLAAAGPVTLVPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYVAPTLVLLLAVLLYGEHLTTSTLITFAFIWAGLAIYSVDIWLKSR 292
>gi|330979920|gb|EGH78220.1| rarD protein [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 295
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 69/294 (23%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ P+Y + + V +E+I HR LW+ ++++
Sbjct: 2 QAANPRRGYILGLSAYIIWGLFPIYFKAIAAVPAIEIIIHRALWAALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V L +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLAMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + H +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFAAIGVAQHVWHVGSLPWVSLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVSAQPEFWTTTQAIWLAAAGPVTLVPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYIAPTLVLLLAVLLYGEHLTTSTIITFAFIWTGLAIYSVDIWLKSRSR 294
>gi|315659361|ref|ZP_07912225.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
lugdunensis M23590]
gi|315495786|gb|EFU84117.1| DMT superfamily drug/metabolite transporter RarD [Staphylococcus
lugdunensis M23590]
Length = 307
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/298 (24%), Positives = 144/298 (48%), Gaps = 6/298 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG- 76
N+++ G LF A++LWGI P+Y + + +S E++++R++ S+ + I
Sbjct: 8 NSNIEFKKGVLFALGAHLLWGILPIYWRLIGNISAFEILAYRIILSMIFMIIMIYILKQS 67
Query: 77 --GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L P + ++ + ++ ++WG FI+A+ TS Y++ P++S+ L
Sbjct: 68 TAFKRDLTHLFATPIQLIAIIVAGYVITLNWGTFIWAVSNGHVLQTSLGYYINPLVSILL 127
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FLKER N + +A + + +L MT+ G P++SL +A ++ Y +K + V +
Sbjct: 128 AFIFLKERFNKFESLAIVFAAIGVLYMTIRVGEFPMISLMLAFSFGIYGLLKKLVRVDAM 187
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G IE V A L Y+++ + L G + +FS G +R
Sbjct: 188 TGIAIECIVTAPAGLIYIIYLWQIHHTSVGINMASFWLLFSGAVT--AVPLILFSAGARR 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
LS G ++Y +P ++ + +F+ K+P D + I F + I + +Y + + +N
Sbjct: 246 IPLSLTGFIQYVSPTIIFLLGIFVFKEPFDIHQFITFIFIWIGIALYSISQYVKMKRN 303
>gi|38234156|ref|NP_939923.1| hypothetical protein DIP1581 [Corynebacterium diphtheriae NCTC
13129]
gi|38200418|emb|CAE50106.1| Putative membrane protein [Corynebacterium diphtheriae]
Length = 299
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 71/286 (24%), Positives = 143/286 (50%), Gaps = 4/286 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ AY+LWG+ P + L + LE+I+HR+LW+ + A+V LL
Sbjct: 8 MIYGILAYLLWGLFPAFFPLLLPAAPLEIIAHRILWTGVFMAIAVVITRQWRELLSAGKG 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + ++ ++A +W ++ A+ T +F YF+ P+++V LG FL+ERL L
Sbjct: 68 QWLRLAL---ASVLIAANWLIYVIAVNTGHVADAAFGYFINPIVNVVLGVAFLRERLRPL 124
Query: 147 Q-IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q + + +++ PLLSL++A+++ Y +K + + ++ E VL
Sbjct: 125 QSLSVVIAAAAVVVLSVFGGSAPLLSLSLALSFGFYGLVKKKVTISAAASLTAETFVLLP 184
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL Y+++ +G F LI G + + +F K LST+G+++Y
Sbjct: 185 LALGYIIYLEITGPGTFVSHGPAHAGLLISAGAITAVPLLLFGLATKFIPLSTIGMLQYM 244
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P ++ +VF++ + I+ ++ + FGI+ I++ +Y+ ++ +
Sbjct: 245 TPTFQMLWAVFVVNENIEPLKWVGFGIIWISVAMYIGDVLLQRRQR 290
>gi|28211456|ref|NP_782400.1| transporter [Clostridium tetani E88]
gi|28203897|gb|AAO36337.1| transporter [Clostridium tetani E88]
Length = 332
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/312 (12%), Positives = 89/312 (28%), Gaps = 17/312 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFS 75
S + G L A WG ++ + LE S + + S R ++ + +
Sbjct: 2 TNSKESKKGILLALLAGASWGAMGIFVKNLEQLGFSPMVISSFRPTIAIIP----YIIIN 57
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + L + YA+ S FV PVI + L
Sbjct: 58 LIKNPECFKTDLKGLLLFAAYGIFALDGMFIGSSYAVKYTGVATASVLLFVNPVIVMILS 117
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT-------- 187
KE+ +IIA +L ++ ++ + + + +
Sbjct: 118 YFLFKEKFTVNKIIALVLTLVGCCLVVKAYDPAAFKVNLIGVFWGIISSFAMALQNILGR 177
Query: 188 ---IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ AI F+ I L +
Sbjct: 178 IGTERYSQKTHLTYSLLFGAIFLWFFEPPWSLVSLIKNTEPTISILNVLALGIVSTLVPT 237
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ + S I+ P++ + + I + + + I +++ ++V+
Sbjct: 238 IAIVKSLEYVESSKASIIASVEPVVASILAFIIFGEIFEIPQLIGMFMIMGSIVLVQTDG 297
Query: 305 VINSGKNKTKKS 316
+ KK+
Sbjct: 298 KKRKIEKTMKKA 309
>gi|294085742|ref|YP_003552502.1| RarD protein, DMT superfamily transporter [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292665317|gb|ADE40418.1| RarD protein, DMT superfamily transporter [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 354
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 2/296 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + G +F A LWG+ P+Y + ++ E+++HR +WS + + +
Sbjct: 57 TVSQSHNLQTRGIIFAIAAGFLWGVLPIYINSVNAITPYEIVAHRAIWSAVLLAALMPFL 116
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G + L+ K L + ++ ++W FIY++ + Q + YF+ P++++ L
Sbjct: 117 GG-FGQVITLLRQRKLQLGLGATTVLVGINWSVFIYSVQSGQIVQAALGYFIYPLVALLL 175
Query: 135 GSVFLKERLNHLQIIAALLIILSLL-IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G + L ERL+ + +A L+ ++ T P+++L +AVT+ Y K + +
Sbjct: 176 GVLMLGERLDRMGWLAIALVACGVIAKSTFAGEPPVIALFLAVTFGLYAVTHKKLGIDPV 235
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ F+E +L + Y+ W G FF G + + GL F G +
Sbjct: 236 KALFVESALLLPIGVAYLWWLTDQGLPIFFGGGAINISLAVLAGLFTILPLLFFHAGNRA 295
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+S ++ Y P ++ +FI P + FG++ + + VY
Sbjct: 296 LTMSMSSLLFYFNPTTQLMVGIFIYDSPFTMADAVTFGLIWVGIAVYFATRPRTPR 351
>gi|207728030|ref|YP_002256424.1| predicted permeases protein [Ralstonia solanacearum MolK2]
gi|206591274|emb|CAQ56886.1| predicted permeases protein [Ralstonia solanacearum MolK2]
Length = 275
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 43 YTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILA 102
Y + L+ V+ LE++SHRV+WSL + + + L + P+ V + S +LA
Sbjct: 2 YFKLLKSVTPLEILSHRVIWSLAVMVGVL-AVKRHWAWLWALHREPRVVARHLASTAMLA 60
Query: 103 VHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT 162
++W +I+A+ S YF+ P++ V L + L ERL Q ++ L + +T
Sbjct: 61 LNWCTYIWAVNHDHVIDASLGYFINPLVVVMLALLVLGERLRPGQWLSVALAAAGVAWLT 120
Query: 163 LHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+G P ++LA+A T+ Y RKT P+G+ EG +E +L L Y+ W
Sbjct: 121 WQAGHLPWIALALAATFGLYGLLRKTSPLGALEGLTLETLLLFPATLAYLGWLAAQQQNA 180
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
F L L+ G L + +F G +R LS +G+++Y +P L ++ V++ +P
Sbjct: 181 FLAAPPGIRLLLVLAGPLTAVPLLLFGAGARRIPLSLLGLLQYVSPTLQLLLGVWLYNEP 240
Query: 282 IDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + ++ + VY + +
Sbjct: 241 FGGPQVFGYVLIWCGLAVYSAEGWMRLRRR 270
>gi|119503963|ref|ZP_01626044.1| rarD protein [marine gamma proteobacterium HTCC2080]
gi|119459966|gb|EAW41060.1| rarD protein [marine gamma proteobacterium HTCC2080]
Length = 298
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/299 (23%), Positives = 138/299 (46%), Gaps = 5/299 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ +G L A +WG LY + V L+V++HR +W+LP V ++ F
Sbjct: 4 SASQNRLGILLALIANSVWGCAALYWIQTKPVPPLDVLAHRGVWTLPAVLIVLLAFGRFR 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S L K+ + +A +++++WG F++A+ + S YF+ P+++ G +
Sbjct: 64 STLLLL-KDWHTLKFTALAAFLISINWGVFLFAVTNGRATEASLGYFMLPILTAMAGVLV 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+E+ Q +A L +L++ + + G P++SL ++++++ Y RK I + +G F
Sbjct: 123 FREQPTRPQQVAMALAVLAVAVQLVAVGTLPIVSLTLSISFATYSVIRKYIQADAIQGLF 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E L +++ + G + + LFL+G G L + + +S
Sbjct: 183 MESLFLMPVGALWLLLHDGGGLFEY---GLRTDLFLLGAGALTAVPLLTHVASARILSMS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
TVG+ Y P L +V + IL + I + F IV + L V + K ++
Sbjct: 240 TVGLFSYLGPSLQLVVAQTILAESITPATLLSFLIVWCGLAFILFDNVRARRRTKKNRT 298
>gi|126666855|ref|ZP_01737831.1| RarD protein [Marinobacter sp. ELB17]
gi|126628571|gb|EAZ99192.1| RarD protein [Marinobacter sp. ELB17]
Length = 293
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 1/290 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + CAY +WG L+ + V LE++ HR++WS + I +
Sbjct: 3 EQTKGVWYGVCAYTIWGSFALFFALFQGVPALEILVHRIIWSCVFLAILISGLRRWQPVK 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +L + +A++WG +IYA+ TR S YF+TP+++V LG V L+E
Sbjct: 63 DAFASPRQLWRVLGCALL-IALNWGVYIYAVETRHVLQASLGYFLTPLVNVALGMVVLRE 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ Q+ A + + + L G + +
Sbjct: 122 QMGRWQMAAVAIAGFGIALQLLMLGELPWISLVLAFSFGVYGLLRKQIQLDGLSGLFVET 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L +P + G F ++P L+ G+L + +F+ +R +L+TVG
Sbjct: 182 LLLLPLGLMTFGWLATSGASNFTRDLPTGSLLMASGVLTAIPLLLFAGAARRLRLATVGF 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y P L V ++ + +P+ ++ F ++ +A++VY + + +
Sbjct: 242 LMYINPTLQFVIALLVFNEPLSPIQLTSFMVIWLALIVYSISSWQGRVRR 291
>gi|302559071|ref|ZP_07311413.1| LOW QUALITY PROTEIN: RarD protein [Streptomyces griseoflavus
Tu4000]
gi|302476689|gb|EFL39782.1| LOW QUALITY PROTEIN: RarD protein [Streptomyces griseoflavus
Tu4000]
Length = 294
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 74/286 (25%), Positives = 145/286 (50%), Gaps = 2/286 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L F AY +WG+ PL+ L+ +E+++HR++WSL V A++ + L
Sbjct: 10 ERRLGLLNGFAAYGMWGLVPLFWPLLKPSGAVEILAHRMVWSLLFVAAALLLIRR-WAWL 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L+ P+ + ++ +A ++ V+WG +I+A+ + S YF+ P++++ +G + LKE
Sbjct: 69 GELLRQPRRLALVTVAAAVITVNWGVYIWAVNSGHVVEASLGYFINPLVTIAMGVLLLKE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL +Q A + ++L++T+ G P +SL +A +++ Y +K + +G E E
Sbjct: 129 RLRPVQWAAVGVGASAVLVLTIGYGRPPWISLCLAFSFATYGLVKKKVNLGGVESLAAES 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ +PAL Y++W G F L L G++ + F R LST+G
Sbjct: 189 AIQFLPALGYLMWLSARGDSTFGTEGTGHALLLAASGIVTALPLVCFGASAIRVPLSTLG 248
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+++Y P+ + + K+ + R F +V +A+ + +
Sbjct: 249 LLQYMTPVFQFLLGILYFKEAMPPERWAGFALVWLALALLTWNALR 294
>gi|227504714|ref|ZP_03934763.1| DMT superfamily drug/metabolite transporter [Corynebacterium
striatum ATCC 6940]
gi|227198724|gb|EEI78772.1| DMT superfamily drug/metabolite transporter [Corynebacterium
striatum ATCC 6940]
Length = 295
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 74/290 (25%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ AY++WG P + L E+++HR++W+ V ++ G L + +
Sbjct: 1 MIYTVAAYLMWGFFPAFFPLLLPAGPFEILAHRIVWTAVLVTGFLLISGGWRELRAFSAR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + ++WG ++ A+ T + YF+ P++SV LG +FLKE LN
Sbjct: 61 TWAWMLAC---GVAITINWGTYVIAINTGHVADAALGYFINPLVSVALGIIFLKESLNKA 117
Query: 147 QIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q + + +++L +T +G P +SLA+A ++ Y +K + V S+ E V+
Sbjct: 118 QAASVGVAFIAVLWLTFMTGQAPYISLALAGSFGIYGLMKKQLSVSSTGSVAAETIVMLP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ Y+ W G F + L+ GL+ + F+ G K+ L+TVG+++Y
Sbjct: 178 VAIGYLTWLSIRGESTFTTEGPMHIVLLVASGLVTALPLLCFAKGAKQLPLATVGMLQYM 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P++ ++ ++F+ + + T R I FGI+ +A+V+YL + K
Sbjct: 238 TPIMQMLWALFVTHEHMSTQRWIGFGIIWVAVVIYLADLARMHRASHRAK 287
>gi|260905098|ref|ZP_05913420.1| putative integral membrane protein (rarD protein) [Brevibacterium
linens BL2]
Length = 291
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 4/286 (1%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ AYI+WG+ PL LE+++HR++WSL +++F+ G + +++
Sbjct: 3 YGTTAYIIWGLIPLLFAAAAPTGALEIVAHRIIWSLIF-CAILLFFAKGFARTWLVMRSG 61
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K +L ++ ++AV+W ++Y + T + S Y++ P+IS+ LG +FLKE+L LQ
Sbjct: 62 KTFWLLALASVLIAVNWTTYVYGIETGRLVEISLGYYLNPLISIGLGVIFLKEKLRPLQW 121
Query: 149 IAALLIILSLLIMTLHSGIPLL---SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
A ++++++ L G ++A++ + VG+ EG +E VL I
Sbjct: 122 AAVGFGAVAVIVVGLGIGRFPYLALTVAVSFGLYGLVKNKVGGKVGALEGMTVETAVLTI 181
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
P+L ++ + G F + L+ G L + +F +R LS VG+++Y
Sbjct: 182 PSLAFLAYLAAQGEGTFIGFGPWHVVLLLATGPLTAIPLILFGAAARRIPLSWVGMLQYI 241
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
AP + + V + + + T R I F I+ IA+++ V S +
Sbjct: 242 APTMQFILGVALFGEAMSTTRWIGFLIIWIAVILLCTDMVRQSRRR 287
>gi|66812030|ref|XP_640194.1| hypothetical protein DDB_G0282673 [Dictyostelium discoideum AX4]
gi|60468186|gb|EAL66196.1| hypothetical protein DDB_G0282673 [Dictyostelium discoideum AX4]
Length = 510
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 27/304 (8%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + L+ + L + L ++S LE+ R + G +
Sbjct: 213 SKFQGIILLVLSTGLFSVMALAVKQLSKELSSLEIAFFRSFYCFIGCLLILFPLKINPLG 272
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + Y++ F +PV++ L +V LK
Sbjct: 273 PKEKRLFLSLR------GLSGTIGLCAYFYSITVLPLSEAVIISFTSPVMTAALAAVLLK 326
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS-----------------GIPLLSLAIAVTWSAYCF 183
E+ +Q I A L + + +++ S G P L I F
Sbjct: 327 EKWGPVQAICAFLSLCGITVISKPSFLFHDDHNDGSTASHAEGDPHKLLYIFTGIIGAFF 386
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPA---LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ G + VL V + + F ++ ++ G+
Sbjct: 387 GAISYIAVRKVGPNVHAFVLVTYFSGLASLVTFPSAFIFQTFKWPSLKAWGWITLMGVFG 446
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + GI+ K + M Y + + + L + ID + + G+++ +V
Sbjct: 447 TVAQGAVNRGIQLEKAAKAAAMNYLQIIFTFIWEITFLHETIDWITLLAAGLILSCAIVT 506
Query: 301 LLPT 304
+
Sbjct: 507 AIRK 510
Score = 44.9 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 42/109 (38%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E+ F + LG LFL GL + C + Y I LS
Sbjct: 245 LEIAFFRSFYCFIGCLLILFPLKINPLGPKEKRLFLSLRGLSGTIGLCAYFYSITVLPLS 304
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+ +T+P++ + +LK+ V+ I + + + V P+ +
Sbjct: 305 EAVIISFTSPVMTAALAAVLLKEKWGPVQAICAFLSLCGITVISKPSFL 353
>gi|225156163|ref|ZP_03724644.1| RarD protein, DMT superfamily transporter [Opitutaceae bacterium
TAV2]
gi|224803141|gb|EEG21383.1| RarD protein, DMT superfamily transporter [Opitutaceae bacterium
TAV2]
Length = 321
Score = 94.6 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/296 (23%), Positives = 149/296 (50%), Gaps = 2/296 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ ++ G L +++LWG P++ + ++ +S E+I HR++WSL +F + +
Sbjct: 25 SATAASSVRGGLAAGASFVLWGTFPIFWKQMQGISAWELICHRMVWSLFFLFAVL-AWQK 83
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L L +P+ +G+ S+ +LA +W +++ + TS YF+TP+ +V LGS
Sbjct: 84 SLRGLSAAFASPRLIGLNALSSLLLAANWLIYVWGVNHDYVIETSLGYFLTPLCNVVLGS 143
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L+E+L Q A L L + ++ + G P ++ +A +WS Y +K +G+ G
Sbjct: 144 AVLREKLRRAQWSAVALASLGVGLLLVRLGHVPWIAFGLAGSWSCYGILKKKSALGALAG 203
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+E +L A +VW GG + ++++ GL+ + +F +G +R +
Sbjct: 204 LTVETLLLFPIAAAALVWLALRGGGALGHVSAVQHVYVLSVGLVTAVPLLLFGWGAQRLR 263
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
L+T+G+++Y P + + +F+ + + T + ++ ++VY +V+ +
Sbjct: 264 LTTIGLLQYIGPTIQFLIGLFVYHETLQTEQLWALILIWAGLIVYSTDSVLAQRQR 319
>gi|294626728|ref|ZP_06705323.1| drug/metabolite transporter superfamily protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|294667178|ref|ZP_06732401.1| drug/metabolite transporter superfamily protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292598976|gb|EFF43118.1| drug/metabolite transporter superfamily protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292603077|gb|EFF46505.1| drug/metabolite transporter superfamily protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 302
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 88/294 (29%), Positives = 154/294 (52%), Gaps = 3/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S G L ++LWG+ P+Y L+ V L++I+HR++WS V ++ SG L
Sbjct: 5 SSQDARRGLLITASTFVLWGLVPVYWHLLKAVPSLQIIAHRIVWSTVLVVAWLLASSG-L 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+ ML S+ +A +WG +I+A+ S YF+ P++SV LG +
Sbjct: 64 RWWRSIAAQPRALRMLAGSSVAIAFNWGLYIWAINAGHVIEASLGYFINPLLSVLLGVLV 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL +Q +A +L +T+ +G P ++L +AV++ Y RK + V + G
Sbjct: 124 LKERLRRIQWVAVACAAAGVLWLTIDAGAPPWIALGLAVSFGIYGLLRKLVAVDAVAGLG 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PAL W G F G T ++ G++ + F+YG++R L
Sbjct: 184 VESVYLFVPALLLAAWGEQGHGGAFLSGWSLRTDAMLIFGGVVTALPLIGFAYGVRRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S VGI++Y AP L ++ V+ +P D R I F + + +++++ +V+ + +
Sbjct: 244 SLVGILQYIAPSLQLLLGVWFFHEPFDQGRAIGFAAIWVGLLLFVGDSVVRARQ 297
>gi|154174334|ref|YP_001408359.1| RarD protein [Campylobacter curvus 525.92]
gi|112802608|gb|EAT99952.1| RarD protein [Campylobacter curvus 525.92]
Length = 292
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/292 (23%), Positives = 142/292 (48%), Gaps = 4/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ A+ LWG ++ + + V+ E+++HR++WS +FF +++ L
Sbjct: 2 SEEKKGLIYGISAFTLWGFLVVFFKQFDGVNPYEIVAHRLIWSAVVLFFVLLWLKR-LKK 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + + L S +LA W F+YA+ S F++P+IS+ LG V LK
Sbjct: 61 ACKILLDLRVSFWLFASGFLLASSWCIFVYAVDASLVLQASLGNFISPLISILLGFVVLK 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+++ I+ ++ +++++ +P+LS+ +A+ +AY RK + V + EG F+E
Sbjct: 121 EKISTGAKISIAIVFIAIMVQVFAIGSLPVLSILLALIVAAYGLIRKQVKVPALEGLFVE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ L Y+ + SG HF L+ G + F+ G R LS +
Sbjct: 181 NLLILPIGLVYIFYVVVSGQNHFLADLNG--ALLMLCGPVTIVPLLFFTAGATRINLSLM 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G ++Y P + ++ ++F+ + ++ + + F ++ +A+ + L + +
Sbjct: 239 GYLQYINPTISMLLAIFVYGEKVEFYKLVSFCLIWLALGIMSLQGIYTYKRK 290
>gi|190891102|ref|YP_001977644.1| permease [Rhizobium etli CIAT 652]
gi|190696381|gb|ACE90466.1| putative permease protein [Rhizobium etli CIAT 652]
Length = 305
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 96/289 (33%), Positives = 167/289 (57%), Gaps = 3/289 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F AY+LWG P Y + + + EVI+HR++WSLP ++ + +
Sbjct: 15 SPRGFAFALTAYLLWGFLPFYMKAVAHIPPAEVIAHRIVWSLPLAGIVLIVLGRT-ADIS 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + M +A+++ V+WG +++A+ + YF+ P+ S+FLG+V LKE+
Sbjct: 74 AALRSPRMLAMGALTASLITVNWGTYVWAIGAGHSLDAALGYFINPLFSIFLGAVLLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQI A L L++ I+ GIP ++L +AV+W Y RKT+P+G ++GFF+E+
Sbjct: 134 LQPLQIAAIALAGLAVAILAFDSGGIPWVALTLAVSWGFYALLRKTLPLGPNQGFFLEVL 193
Query: 202 VLAIPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L+ PAL Y+++ F G+ + + DT L+G G++ + I++ G K KLST+G
Sbjct: 194 ILSGPALLYILYLEFGSGQGHLYRTGLADTTLLLGCGVITAVPLMIYANGAKLLKLSTIG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IM+Y AP ++ + +VF ++P+ T R I F ++ + Y + S
Sbjct: 254 IMQYIAPTMIFLIAVFAFQEPLGTARMIAFPLIWAGLFFYSWSMLKGSR 302
>gi|72163078|ref|YP_290735.1| RarD protein [Thermobifida fusca YX]
gi|71916810|gb|AAZ56712.1| RarD protein [Thermobifida fusca YX]
Length = 312
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 79/288 (27%), Positives = 152/288 (52%), Gaps = 3/288 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L+ +Y +WG PLY L + EV+ HR++WSL ++ ++
Sbjct: 5 RKGVLYGASSYFMWGFLPLYWPLLTPPATAFEVLLHRMIWSLVV-TLVVLLVQRNWQWIR 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L++P+ + +L+ SA +++++WG FI A+ T ++ +YF+ P++SV LG + KER
Sbjct: 64 GVLRSPRRLLLLLASAALISLNWGAFITAVTTGHTLQSALAYFINPLVSVALGLLVFKER 123
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L Q A LL +L++ ++T+ G P L+LA+A +++ Y +K + + E E
Sbjct: 124 LRPGQWAALLLGVLAVAVLTVDYGSLPWLALAMAFSFAVYGALKKFVGLDGVESLSAETA 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL +PAL V+ +G F + L L+G G++ + +F R L+ VG+
Sbjct: 184 VLFLPALGGAVYLEVTGTGTFTSVSPLHALLLVGAGVVTAAPLMLFGAAAHRIPLTLVGL 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+++ P++ + + + + + R I F +V A+VV+++ + ++
Sbjct: 244 LQFMVPVMHFLIAWLVFGEDLSLGRWIGFAVVWTALVVFVVDMLRHAR 291
>gi|319892436|ref|YP_004149311.1| RarD protein [Staphylococcus pseudintermedius HKU10-03]
gi|317162132|gb|ADV05675.1| RarD protein [Staphylococcus pseudintermedius HKU10-03]
gi|323464461|gb|ADX76614.1| chloramphenicol-sensitive protein RarD, putative [Staphylococcus
pseudintermedius ED99]
Length = 305
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 6/292 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G LF AY++WG PLY + V +E + +R++ SL + + +D
Sbjct: 8 KKGILFALLAYVIWGTLPLYWALIHDVDPIETLMYRIVLSLIFMLLLLPIIGQWQRFAQD 67
Query: 84 T---LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
P + +++ + I+ V+WG FIYA+ TS Y++ P++S+ L +F K
Sbjct: 68 MAQLKAKPFKLLIIILAGYIVTVNWGTFIYAIDAGFVLQTSLGYYINPLVSILLSMIFFK 127
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER N L+ +A L +L ++ MT G P +SL +A ++ Y +K +P+ + IE
Sbjct: 128 ERFNRLEWVAILFAVLGVVYMTFKVGEFPYISLILAFSFGIYGLLKKLVPMPALSSITIE 187
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
A A+ Y++ G + L G + FS G R LS +
Sbjct: 188 SLATAPMAIIYLIIVGQTADLSIGWNMSTFWLLFSGAVT--ALPLLSFSEGAIRIPLSLM 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G ++Y P L+ + +F+ K+P + + I F + + +V+Y++ ++ K
Sbjct: 246 GFIQYVGPTLIFILGIFVFKEPFNVDQFITFCFIWVGIVIYVISQILKIKKR 297
>gi|288957502|ref|YP_003447843.1| chloramphenicol-sensitive protein [Azospirillum sp. B510]
gi|288909810|dbj|BAI71299.1| chloramphenicol-sensitive protein [Azospirillum sp. B510]
Length = 310
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 70/301 (23%), Positives = 145/301 (48%), Gaps = 6/301 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGI-TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ A T + +Y++WG+ P++ + L V +E+++HRV+W++ V ++
Sbjct: 6 TPAKAPTSTSAAFVAALSSYLIWGLVNPVFFKSLGDVGAVEIVAHRVVWTVVLVGSIVLA 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G +++ + + +G+LV + ++ V+W FI+A++ + S YF+ P+I+V
Sbjct: 66 TRGPAAIVTAV-GSWRRLGVLVVTTLLVTVNWTVFIWAVVNSRLVEASLGYFINPLINVL 124
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGS 192
LG +FL ERL+ +++A + + + G +P ++L++A+++ Y RK +
Sbjct: 125 LGVLFLHERLSRGRMLAVAIATAGVGSLVASYGAVPWVALSLALSFGFYALVRKKAAIDP 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G +E +L AL Y++W G G G + G + + +F G
Sbjct: 185 LIGLLVETALLLPAALGYLLWLGGGGAFGHGWGESILL---VLAGPMTAVPLVLFMIGAG 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R L+T+G+++Y P ++ V + + I F + +A+ V+ V N +
Sbjct: 242 RLTLTTMGLLQYVGPTGQLLLGVLVYGEAFTRGHAITFACIWVALAVFTADAVHNHRRTS 301
Query: 313 T 313
Sbjct: 302 R 302
>gi|167624489|ref|YP_001674783.1| transporter DMT superfamily protein [Shewanella halifaxensis
HAW-EB4]
gi|167354511|gb|ABZ77124.1| RarD protein, DMT superfamily transporter [Shewanella halifaxensis
HAW-EB4]
Length = 313
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/300 (22%), Positives = 131/300 (43%), Gaps = 5/300 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ N + + G +++LWG+ PLY FL ++ E+++ R+L+S+P + +
Sbjct: 4 TTVNHASSSFKGNALAAFSFLLWGMLPLYYHFLPNANINELLAFRILFSVPFMLLVFLLM 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + K+V + ++ I+ V W F +A+ Q S +F+ P+ ++ L
Sbjct: 64 GRSIPSMAQLKADKKSVALCGLASLIMCVSWYSFTWAITHGQVLAASLGFFINPLFAIAL 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSS 193
G +FL ++L Q +A +L + M G P L+L++ ++ Y +K I S
Sbjct: 124 GVLFLGDKLTAAQKMAVVLGGCGISYMVYSYGELPWLALSMGSFFALYGLCKKFIRFDSL 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN----IPDTLFLIGYGLLNSFVFCIFSY 249
+E +L A Y+ W S L IG + F+
Sbjct: 184 TSVTLEALLLMPFAAIYLFWLWSSDQSVAISSALSGETSVLLLYIGSAPVTLMPLVFFAL 243
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ LS +G+M+Y P L + +V + + D V+ + F ++ +++ L +
Sbjct: 244 AIRATSLSMIGLMQYIEPSLHFLLAVVLFNEHFDQVKAVSFALIWTGLLLCSLEALPRLR 303
>gi|157961685|ref|YP_001501719.1| transporter DMT superfamily protein [Shewanella pealeana ATCC
700345]
gi|157846685|gb|ABV87184.1| RarD protein, DMT superfamily transporter [Shewanella pealeana ATCC
700345]
Length = 313
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 5/300 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + G +++LWG+ PLY FL ++ E+++ R+L+S+P + V
Sbjct: 4 TTSQNAASSFKGNALAAFSFLLWGLMPLYYHFLPNANINELLAFRILFSVPFMALVFVLM 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + ++V + ++ I+ V W F +A+ Q S +F+ P+ ++ L
Sbjct: 64 GRRFPSIATLKADKRSVLLCGLASLIMCVSWYSFTWAITHGQVLAASLGFFINPLFAIGL 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSS 193
G +FL ++L+ Q +A +L + M G P L+L++ ++ Y +K I S
Sbjct: 124 GVLFLGDKLSAAQKMAVVLGTCGISYMVYSYGELPWLALSMGSFFALYGLCKKFIRFDSL 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFF----LGNIPDTLFLIGYGLLNSFVFCIFSY 249
+E +L A Y++W S G L IG + F+
Sbjct: 184 TSVTVEALLLMPVAAVYLLWLWSSDQSVAISAALSGQTSVLLLYIGSAPVTLMPLVFFAL 243
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ LS +G+M+Y P L + +V + + D V+ + F ++ +++ L +
Sbjct: 244 AIRATSLSMIGLMQYIEPSLQFLLAVIVFNEVFDQVKAVSFALIWTGLLLCSLEALPALR 303
>gi|94985402|ref|YP_604766.1| hypothetical protein Dgeo_1301 [Deinococcus geothermalis DSM 11300]
gi|94555683|gb|ABF45597.1| protein of unknown function DUF6, transmembrane [Deinococcus
geothermalis DSM 11300]
Length = 294
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 86/280 (30%), Gaps = 10/280 (3%)
Query: 28 LFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +LWG+ + + V LEV R + L
Sbjct: 7 LLILLAAVLWGLLGILGKNAQAAGVGPLEVAFWRAVLGGGLFALHTAVTRAPLP------ 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + F ++V +G + A+ L S + P LG L+ERL
Sbjct: 61 RGRDLLVTAAFGLVGVSVFYGAYQLAVRAGGASLASVLLYTAPAFVALLGWGLLRERLGV 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIA--VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +A ++ + +++L G + A A A G + L
Sbjct: 121 REGLAVAGTLMGIALISLGGGQGVNVTAAALTWGLLAGFTYSLYYLYGKAYFTRYPPTAL 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL L F + +S G++ + ++
Sbjct: 181 YAVALPVGALGLLPFVAFSAKTPAAWGSLAGIAVLSTYFAYLAYSAGLRHLPATRASVIA 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P++ + + + + T + +V+ A ++ L
Sbjct: 241 SLEPVVAAGLAALLFGERLSTTALLGAALVIGAALLLSLE 280
Score = 35.7 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 26/70 (37%)
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ S + + ++ S ++ YTAP + + +L++ + + +
Sbjct: 71 FGLVGVSVFYGAYQLAVRAGGASLASVLLYTAPAFVALLGWGLLRERLGVREGLAVAGTL 130
Query: 295 IAMVVYLLPT 304
+ + + L
Sbjct: 131 MGIALISLGG 140
>gi|325292447|ref|YP_004278311.1| RarD protein [Agrobacterium sp. H13-3]
gi|325060300|gb|ADY63991.1| RarD protein [Agrobacterium sp. H13-3]
Length = 302
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 99/287 (34%), Positives = 173/287 (60%), Gaps = 2/287 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G F AY+LWG P+Y + + +S +EVI HRV+WS+P ++ + ++
Sbjct: 17 RGFAFALSAYLLWGFLPIYMKAVAHISPIEVIVHRVIWSVPIGAAVLIALGRT-AEIRTA 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
LK PK + M +A +++++WG +I+A+ + + YF+ P+ S+FLG+V LKE+L
Sbjct: 76 LKTPKMLAMASLTAALISINWGIYIWAIGAGRALDAALGYFINPLFSIFLGAVLLKEKLY 135
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
QI A L+ L++ I+T H +P +S+A+ V+W Y F RKT+P+G+++GF +E+ +L
Sbjct: 136 PAQIAAIGLVGLAVAILTWHAGSLPWVSIALTVSWGFYAFFRKTLPIGATQGFLLEVMLL 195
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
++PA+ + W SG HF GN DT L G++ + ++ G K +LST+GIM+
Sbjct: 196 SVPAVLVLAWLAISGQAHFMAGNATDTWLLAASGIVTAVPLILYGNGAKLLRLSTIGIMQ 255
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y AP ++ + ++FI K+P D VR F ++ +A+ +Y +++ +
Sbjct: 256 YIAPTMIFLIAIFIFKEPFDMVRMAAFAMIWVALAIYTASSLMRLKR 302
>gi|260881157|ref|ZP_05403749.2| protein RarD [Mitsuokella multacida DSM 20544]
gi|260849664|gb|EEX69671.1| protein RarD [Mitsuokella multacida DSM 20544]
Length = 287
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 142/287 (49%), Gaps = 4/287 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT-- 84
+ Y++WG+ PLY L + E+++HR++WS + ++ S +D
Sbjct: 1 MMAALSTYLIWGVLPLYWNLLARAEANEILAHRIIWSFIFMVVVLMVTKRWQSFKEDCRA 60
Query: 85 -LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+N K +L+ +A ++++W +I+A+ TS Y++ P++SV G VF +ER+
Sbjct: 61 LWQNKKRGAILLLAAFTISLNWLTYIWAVNHGHVIDTSIGYYINPLMSVLFGIVFFRERI 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ L+ I+ LL + +++MT G P +++ +AV++S Y +K + + +E +
Sbjct: 121 SGLKKISLLLAAIGIVLMTYQLGKLPWVAVVLAVSFSVYGALKKQLHLNPFSSITLETLL 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ A+ Y+ S HF L L+L+G G++ + +FSYG L+ +G
Sbjct: 181 MVPFAVPYIGILMMSPANHFSLATPDLALYLMGTGVVTAVPLVLFSYGANLLPLNVLGFF 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+Y +P + ++ +F + + G V A+V++ + +
Sbjct: 241 QYISPTIGLLLGIFFFHETFGMAQISALGFVWAAIVLFTVAESLRGR 287
>gi|251798212|ref|YP_003012943.1| RarD protein, DMT superfamily transporter [Paenibacillus sp. JDR-2]
gi|247545838|gb|ACT02857.1| RarD protein, DMT superfamily transporter [Paenibacillus sp. JDR-2]
Length = 292
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 2/290 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + AYI+WG+ PLY + V E++SHRV+WS + + +K
Sbjct: 4 GLVNAIIAYIMWGVLPLYWKLFNNVPAGEILSHRVVWSFVFMGILVAVQRR-WGDMKRIA 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + L S ++A +W FI+A+ TS Y++ P+++V L VFL+E+ N
Sbjct: 63 TSRALLLPLAASGLLIAANWLIFIWAVNNGHVVETSLGYYLNPLLNVLLAVVFLREKPNR 122
Query: 146 LQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A + ++LI+ + G P +++++A ++ Y FA+K I +S G E V+
Sbjct: 123 GQWLAIAIAGSAVLIIAIDYGRFPWVAISLAASFGLYGFAKKKIMQDASVGLLSETAVVL 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL Y ++ +G + + L+ G++ + F+ R LS +G ++Y
Sbjct: 183 PVALGYWIYLAAAGKTTAWTLPASTFVELLLSGVVTALPLLFFARAAARMALSALGFVQY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P +M+ S+F+ K+ + V + F ++ ++VVY + +V + K
Sbjct: 243 IGPTIMLFLSIFVFKESVSPVLLVGFALIWTSLVVYAVASVRGTRLAKAS 292
Score = 36.0 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 50/140 (35%)
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF 223
++G+ +A + + + V + E + + V G
Sbjct: 2 NNGLVNAIIAYIMWGVLPLYWKLFNNVPAGEILSHRVVWSFVFMGILVAVQRRWGDMKRI 61
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ L L GLL + + IF + + + + Y PLL ++ +V L++ +
Sbjct: 62 ATSRALLLPLAASGLLIAANWLIFIWAVNNGHVVETSLGYYLNPLLNVLLAVVFLREKPN 121
Query: 284 TVRTIVFGIVVIAMVVYLLP 303
+ + I A+++ +
Sbjct: 122 RGQWLAIAIAGSAVLIIAID 141
>gi|159184603|ref|NP_354092.2| hypothetical protein Atu1068 [Agrobacterium tumefaciens str. C58]
gi|159139905|gb|AAK86877.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 302
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 100/287 (34%), Positives = 175/287 (60%), Gaps = 2/287 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G F AY+LWG P Y + + +S +EVI HRV+WS+P ++ + ++
Sbjct: 17 RGFAFALSAYLLWGFLPFYMKAVAHISPIEVIVHRVIWSVPIAAVVLIALGRT-AEIRTA 75
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L+NPK + M +A +++++WG +I+++ + + YF+ P+ S+FLG+V LKE+L
Sbjct: 76 LRNPKMLAMASLTAALISINWGVYIWSIGAGRALDAALGYFINPLFSIFLGAVLLKEKLY 135
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
QI A L+ L++ I+T H +P +S+A+ V+W Y F RKT+P+G+++GF +E+ +L
Sbjct: 136 PAQIAAICLVGLAVAILTWHAGSLPWVSIALTVSWGFYAFFRKTLPIGATQGFLLEVMLL 195
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+IPA+ ++W FSG HF GN DT L G++ + ++ G K +LST+GIM+
Sbjct: 196 SIPAVLVMIWLAFSGQAHFMGGNSADTWLLAASGVITAVPLILYGNGAKLLRLSTIGIMQ 255
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y AP ++ + ++FI K+P D VR F ++ +A+ +Y +++ +
Sbjct: 256 YIAPTMIFLIAIFIFKEPFDMVRMAAFAMIWVALAIYTGSSLMRLKR 302
>gi|325914511|ref|ZP_08176855.1| rarD protein [Xanthomonas vesicatoria ATCC 35937]
gi|325539281|gb|EGD10933.1| rarD protein [Xanthomonas vesicatoria ATCC 35937]
Length = 305
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 89/294 (30%), Positives = 156/294 (53%), Gaps = 3/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+++ G L ++++WG+ PLY L+ V L++I+HR++WS V +V SG L
Sbjct: 8 SAVEARRGLLMTAASFVIWGLVPLYWHLLKVVPSLQIIAHRIVWSAVLVVVWLVASSG-L 66
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+ ML S+ +A +WG +I+A+ S YF+ P++SV LG +
Sbjct: 67 RWWRTIAAQPRALWMLAASSVAIAFNWGLYIWAINAGHVIEASLGYFINPLLSVLLGVLV 126
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL +Q +A + +L +T+ +G P ++L +AV++ Y RK + V G
Sbjct: 127 LKERLRGIQWLAVACAAIGVLWLTIDAGAPPWIALGLAVSFGLYGLLRKLVAVDPVAGLG 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PAL W G FF G T L+ G++ + F+YG++R L
Sbjct: 187 VESVYLFVPALLLAAWGEQGHGGAFFSGWDLRTDLLLIFGGVVTAVPLIGFAYGVRRIPL 246
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S VGI++Y P L ++ V+ +P D R I F + + +++++ +V+ + +
Sbjct: 247 SLVGILQYIGPSLQLLLGVWFFHEPFDQGRAIGFAAIWVGLLLFVGDSVLRARQ 300
>gi|78049649|ref|YP_365824.1| drug/metabolite transporter superfamily protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78038079|emb|CAJ25824.1| drug/metabolite transporter superfamily protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 302
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 3/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S G L ++LWG+ P+Y L+ V L++I+HR++WS V ++ SG L
Sbjct: 5 SSQEARRGLLITASTFVLWGLVPVYWHLLKAVPSLQIIAHRIVWSTVLVVAWLLASSG-L 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+GML S+ +A +WG +I+A+ S YF+ P++SV LG +
Sbjct: 64 RWWRSIAAQPRALGMLAGSSVAIAFNWGLYIWAINAGHVIEASLGYFINPLLSVLLGVLV 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL +Q +A +L +T+ +G P ++L +AV++ Y RK + V G
Sbjct: 124 LKERLRRIQWVAVACAAAGVLWLTIDAGAPPWIALGLAVSFGIYGLLRKLVAVDPVAGLG 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PAL W G F G T ++ G++ + F+YG++R L
Sbjct: 184 VESVYLFVPALLLAAWGEQGHGGAFLSGWSLRTDAMLIFGGVVTALPLIGFAYGVRRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S VGI++Y AP L ++ V+ +P D R + F + + +++++ +V+ S +
Sbjct: 244 SLVGILQYIAPSLQLLLGVWFFHEPFDQGRAMGFAAIWVGLLLFVGDSVVRSRQ 297
>gi|291299938|ref|YP_003511216.1| RarD protein, DMT superfamily transporter [Stackebrandtia
nassauensis DSM 44728]
gi|290569158|gb|ADD42123.1| RarD protein, DMT superfamily transporter [Stackebrandtia
nassauensis DSM 44728]
Length = 311
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 3/278 (1%)
Query: 34 YILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
Y+L+G+ LY LE LE+++HR++WSL V + SG + +
Sbjct: 32 YVLFGLLALYWPLLEPAGALEILAHRIVWSLLFVVALLAVTSGRKAFKTLRGNRKALYYL 91
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
+ + ++ +WGF+I+A+ + Y++ P+ S LG++ L+ERL+ Q A +
Sbjct: 92 VA-AGCLVGANWGFYIWAVNNNHVVEAALGYYINPLFSTLLGTLLLRERLHRAQWAAIAI 150
Query: 154 IILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ + P ++LA+A T+ Y A+K + + E +E L +PA ++V
Sbjct: 151 AGSGVLWLAIAAGSPPWIALALAGTFGCYGLAKKQANLPAMESLAVETATLVLPAAAFLV 210
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ G HF L + R L+ VG++++ P + +
Sbjct: 211 FLSAQGTGHFGADTGHSLLLASSGLATAVPLLLFGF-AATRIPLTAVGMLQFLTPTIQFL 269
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
VF + + + + +V IA+ +Y++ V +
Sbjct: 270 IGVFGMHETVGEAGLGPYVLVWIAVAMYVVCDVRIRRR 307
>gi|223039786|ref|ZP_03610071.1| RarD protein [Campylobacter rectus RM3267]
gi|222878978|gb|EEF14074.1| RarD protein [Campylobacter rectus RM3267]
Length = 296
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + A+I WG+ P+Y + L +S E+++HR++WS+ +F + + L
Sbjct: 4 KNQAKIGFICALAAFITWGVFPIYFKQLNALSANEIVAHRIVWSVLLLFLLLKFSRK-LG 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K L + K L + ++ +W +IYA+ + S YF+ P++++ LG + L
Sbjct: 63 AAKKILGDKKTAFWLFVTGLLIGANWWIYIYAVNIGKIVEASLGYFINPLVNMLLGVIIL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KE+L A ++ +++ + G+P++S+ + +T+ Y RK + V S EG F
Sbjct: 123 KEKLTRAGKFALGVVFVAIGVQIYDAGGLPVISIILPITFGFYSLIRKRLGVPSFEGLFA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E ++A AL + + SG HF F+ G +F+ R LST
Sbjct: 183 ETALIAPIALAALFFVAASGQNHFSFSWFGL--FIALCGPATVVPLLLFNSATTRLNLST 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+G ++Y +P + ++ +VF +P+ ++ + F ++ A+ V + +
Sbjct: 241 IGYLQYISPSMQLLLAVFYYGEPVSALKALSFLLIWSALAVVSFSAIYSKK 291
>gi|154173755|ref|YP_001408358.1| RarD protein [Campylobacter curvus 525.92]
gi|153793002|gb|EAT99951.2| RarD protein [Campylobacter curvus 525.92]
Length = 290
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 69/292 (23%), Positives = 145/292 (49%), Gaps = 5/292 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N G ++ A+++WG PL+ VS E+++HR++WS + ++
Sbjct: 2 NTPNEQTQGFIYALSAFLMWGFLPLFFGLFGKGVSAYEILAHRIIWSFALMAAFLLMSKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++ A + + S T+++++WG ++YA+ + +S F+ P++++ LG
Sbjct: 62 AKNIKILLQDTKTAKMLFL-SGTLISLNWGVYVYAVNNGKILESSLGSFINPLVNMLLGV 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ KE+L ++I +++L++ + LH G PL+++ A++++ Y RK+I + + +G
Sbjct: 121 IIFKEKLGKMEIFGVCMVVLAVSVQVLHFGDLPLVAIFSALSFAFYAAVRKSIKIAALDG 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
FIE ++ AL YV + S HF L + F+ R
Sbjct: 181 LFIETMLVVPFALCYVFYLAASEQSHFGLNQNSILFV--LSSFVTVVPLMAFNAATTRIN 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
LST+G ++Y +P + ++ +VF+ + +D R F ++ A++V L + +
Sbjct: 239 LSTIGYLQYLSPSIGMLCAVFVFGETLDIYRLASFCLIWFALLVVALGRIRH 290
>gi|147918844|ref|YP_687430.1| DMT family permease [uncultured methanogenic archaeon RC-I]
gi|110622826|emb|CAJ38104.1| predicted transporter (DMT superfamily) [uncultured methanogenic
archaeon RC-I]
Length = 319
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 101/295 (34%), Gaps = 12/295 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + I+WG + + ++ L+ + +E+ + R + P + + F G SL+ +
Sbjct: 14 ILLVLVMIVWGGSFIASKVGLDGMYPIELATLRFAIATPVLLAFTLLFYGWRSLIIE--- 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ + T + + + + A+ T+ + V +FLKE+ N
Sbjct: 71 KKDLWVLVGMAMTGITLQYITQLIAMTYTTVTNTALLINMGTFFVVIPSIIFLKEKFNVD 130
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV--------GSSEGFFI 198
++ ++ L ++ + I I A + + S +
Sbjct: 131 NLLGIVIAFAGLALVVTNGKIEFSPQLIGDGIILISAALWAVYILIGNKLAGKYSVLTQL 190
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + L + L + + F+ I + S
Sbjct: 191 NYIFVIGFIGLLPFYFLTPHHDLSQLSTVSWASLLYLAIFCSIIAYFFFNDAIIKIGPSK 250
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I +Y P+ ++ ++ +L +P+ + + V+ + + I + + K
Sbjct: 251 SAIYQYLEPVFAVIFAILLLNEPLTGFILVGGIMTVLGIGMADNNIRIFTRRRKK 305
>gi|309790972|ref|ZP_07685513.1| transporter DMT superfamily protein [Oscillochloris trichoides DG6]
gi|308227004|gb|EFO80691.1| transporter DMT superfamily protein [Oscillochloris trichoides DG6]
Length = 296
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 147/280 (52%), Gaps = 2/280 (0%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
++ +YI+WG+ PL+ L+ VS LE+++HR++W+L + FSG L L ++N
Sbjct: 1 MYAAGSYIIWGLLPLFWHALKHVSALEILAHRIVWALVATLLLTI-FSGHLPKLWAAMRN 59
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + SA +L +W +I+A+ TS YF+ P+++V G +FL ERL Q
Sbjct: 60 WRILLTFTLSAALLTTNWFIYIWAVNAGYVVETSLGYFINPLVNVIFGVLFLHERLRFGQ 119
Query: 148 IIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I A + ++ +T+ G P ++L +A T+ Y RKT P+ S EG +E + +P
Sbjct: 120 IAAVTVASAGVIYLTVLYGALPWIALVLAGTFGLYGLIRKTAPISSLEGLTLETLIAFVP 179
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
AL Y+++ G F I L + G++ + +F+ G ++ + +GI++Y A
Sbjct: 180 ALGYLIFLESQGHGAFLHTEITTNLLFVTSGVVTAVPLLLFASGARKITMVLLGILQYIA 239
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P L + + + + R + F ++ IA+ +Y + +I
Sbjct: 240 PTLQFILGITFFHEAVTPERLVGFILIWIALSIYTVEGLI 279
>gi|302188453|ref|ZP_07265126.1| RarD protein [Pseudomonas syringae pv. syringae 642]
Length = 295
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 68/292 (23%), Positives = 137/292 (46%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY++WG+ P+Y + + V +E+I HR LWS ++++
Sbjct: 2 QAANPRRGYILGLSAYVIWGLFPIYFKAIAAVPAIEIIIHRALWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V L +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIASNWIIYVWAVNNGRMLEASLGYYINPLVNVLLAMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + H +P +SLA+ +T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFAAMGVAQQVWHVGSLPWVSLALPLTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLALNPMAVSAQPEFWTTTQAIWLAAAGPVTLVPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G ++Y AP L+++ +V + + + T I F + + +Y + + S
Sbjct: 241 TLGFLQYIAPTLVLLLAVLLYGEHLTTSTIITFAFIWTGLAIYSVDIWLKSR 292
>gi|257065077|ref|YP_003144749.1| rarD protein [Slackia heliotrinireducens DSM 20476]
gi|256792730|gb|ACV23400.1| rarD protein [Slackia heliotrinireducens DSM 20476]
Length = 307
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 69/300 (23%), Positives = 126/300 (42%), Gaps = 10/300 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ GTL YILWG+ PLY + L V+ +E+I HR++W
Sbjct: 5 QADMREERTGTLAGLACYILWGLFPLYWKMLVDVNSIEIICHRIIWCFATAIVVCAVLRL 64
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + L+ +A I+A +WG +I+ + + Y++ P++SV +G
Sbjct: 65 HPYRLLSNRR---GWAHLLPAALIIATNWGMYIWGVNNGYVVEAALGYYINPLVSVLIGR 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V KERL +Q IA +L L + T+ G P L+ A+A+++ Y +K S E
Sbjct: 122 VAFKERLTPMQCIAVVLCTLGVTYFTVSYGRFPWLAFALAISFGVYGAIKKHGGYPSFEA 181
Query: 196 FFIEMCVLAIPALFY------VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+E + A+ + G+ + T LI G + + +FS
Sbjct: 182 LAVENTITLPIAIGLAITVAHITGTHAFFGDVSSVAGWKTTALLILGGPVTAIPLMLFSA 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ L+++G ++Y +P L ++ VF+ +P + F + + + +
Sbjct: 242 AANKIPLASLGFIQYVSPTLQLIIGVFVFGEPFTLAHAVCFACIWAGLSFVVADAALRYR 301
>gi|330954928|gb|EGH55188.1| RarD protein [Pseudomonas syringae Cit 7]
Length = 295
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 139/292 (47%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AYI+WG+ P+Y + + V +E+I HR LWS ++++
Sbjct: 2 QAANPRRGYILGLSAYIIWGLFPIYFKAIAAVPAIEIIIHRALWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRDNPQRLAVLALSGTLIASNWIIYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + H +P +SLA+ +T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFAAMGVAQQVWHVGSLPWVSLALPLTFAFYGLIRKQAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +L AL ++ N + ++L G + F+ + +
Sbjct: 181 VETWMLVPLALIWLTLNPTAVSAQPEFWTTTQAIWLAAAGPVTLVPLVCFNAAARHLPFT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T+G ++Y AP L+++ +V + + + T I F + + + +Y + + S
Sbjct: 241 TLGFLQYIAPTLVLLLAVLLYGEHLTTSTIITFAFIWMGLAIYSVDIWLKSR 292
>gi|289666390|ref|ZP_06487971.1| drug/metabolite transporter superfamily protein [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|289669282|ref|ZP_06490357.1| drug/metabolite transporter superfamily protein [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 302
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 86/294 (29%), Positives = 151/294 (51%), Gaps = 3/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L ++LWG+ P+Y L+ V L++I+HR++WS V ++ SG L
Sbjct: 5 SPQEARRGLLITASTFVLWGLVPVYWHLLKAVPSLQIIAHRIVWSTVLVVAWLLATSG-L 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+ ML S+ +A +WG +I+++ S YF+ P++SV LG +
Sbjct: 64 RWWRSIAAQPRALWMLAGSSVAIAFNWGLYIWSINAGHVIEASLGYFINPLLSVLLGVLV 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL Q +A + +L +T+ +G P ++L +AV++ Y RK + V G
Sbjct: 124 LKERLRRTQWVAVVCAAAGVLWLTIDAGAPPWIALGLAVSFGIYGLLRKVVAVDPVAGLG 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PA W G F G T ++ G++ + F+YG++R L
Sbjct: 184 VESVYLFVPASLLAAWGEQGHGGAFLSGWNLCTDAMLIFGGVVTALPLIGFAYGVRRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S VGI++Y AP L ++ V+ +P D R I F + + +++++ +V+ S +
Sbjct: 244 SLVGILQYIAPSLQLLLGVWFFHEPFDQGRAIGFAAIWVGLLLFVGDSVMRSRQ 297
>gi|316934697|ref|YP_004109679.1| hypothetical protein Rpdx1_3375 [Rhodopseudomonas palustris DX-1]
gi|315602411|gb|ADU44946.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris DX-1]
Length = 356
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/309 (12%), Positives = 93/309 (30%), Gaps = 10/309 (3%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLW 62
+ + + L+ +A P + G + + + + ++L + +E+ R L
Sbjct: 46 TSPSNDAVRRLTHRHADHP-LRGIALIVGSTVFLACSDTLAKYLGRTLPPVEIGWIRFLV 104
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+ + + + + V A L FI L S
Sbjct: 105 FVLIMIPVALASK-------EAPLRSARPKLQVLRALALVASSVLFITGLQFLPIAEASA 157
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC 182
+ FV P+ L L E + + IA L+ ++ +LI+ + SA
Sbjct: 158 TSFVAPLFVTALSIPLLGEHVGIRRWIATLVGLVGVLIVIRPGSAAFDPAVVLPILSALG 217
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+A G + ++ A+ V + + D + GL ++
Sbjct: 218 WALTLTLTRMISGADRAVVTMSFSAVVGFVTLSALVPFVWVTPSWHDIGIGLLVGLASTM 277
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + A S + Y+ + + + + D +++ +Y
Sbjct: 278 GQWVVVLAYRYADASVLAPFTYSQLVWVSFLGFGVFGEVPDLWTFAGAAVII-GSGIYTA 336
Query: 303 PTVINSGKN 311
+
Sbjct: 337 HRERLRRRQ 345
>gi|18978415|ref|NP_579772.1| hypothetical protein PF2043 [Pyrococcus furiosus DSM 3638]
gi|18894257|gb|AAL82167.1| hypothetical protein PF2043 [Pyrococcus furiosus DSM 3638]
Length = 291
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 104/276 (37%), Gaps = 8/276 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G LFVF A ++WG ++ +FL +S ++ +RVL++L + + L
Sbjct: 19 GYLFVFLAAVMWGTLGIFAKFLYGFNLSTYTIVFYRVLFALIFLAVYLKVRG-----LPL 73
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + L FS + + + + Y + + PV S+ G + E+L
Sbjct: 74 LMSKDRLPFYLGFSFFSIFLFYSLYFYTVKISSVSFAVLMLYTAPVYSLIFGRILFGEKL 133
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ A L+IL +L++ L G +S +T A V E
Sbjct: 134 TPSKLTAVFLVILGVLLLNLD-GKLNVSKLALLTGLASGLTYSLYGVFVKFAVRREEPER 192
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + + + L + +++ +K ++S I+
Sbjct: 193 VLFNVLLIGLLFLLPVTDLRVPTAALPYLLGLAFFPTFLGYILYNTALKTVEVSKASIIA 252
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P++ I+ + FI + + ++ + +++ ++
Sbjct: 253 TIEPVVAIILAYFIFGEALSLLQYLGASLIIAGAIL 288
Score = 45.3 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 48/138 (34%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+A G + + + + AL ++ G + +
Sbjct: 24 FLAAVMWGTLGIFAKFLYGFNLSTYTIVFYRVLFALIFLAVYLKVRGLPLLMSKDRLPFY 83
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
L + ++ Y +K + +S +M YTAP+ ++ + + + + +
Sbjct: 84 LGFSFFSIFLFYSLYFYTVKISSVSFAVLMLYTAPVYSLIFGRILFGEKLTPSKLTAVFL 143
Query: 293 VVIAMVVYLLPTVINSGK 310
V++ +++ L +N K
Sbjct: 144 VILGVLLLNLDGKLNVSK 161
>gi|308276744|gb|ADO26643.1| Putative permease [Corynebacterium pseudotuberculosis I19]
Length = 294
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 155/291 (53%), Gaps = 4/291 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L+ F AY+LWG+ P Y L + LE+I+HR++W+ + AI L +L
Sbjct: 1 MLYGFLAYLLWGLFPAYFPLLLPAAPLEIIAHRIIWTGVVMALAITATKKWRELRDASLA 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +A ++A +W ++ A+ ++ + YF++P++SV LG VFL ERL L
Sbjct: 61 TWLRIAI---AAILIAANWLIYVIAVNSQHVADAALGYFISPLVSVLLGVVFLAERLRKL 117
Query: 147 QIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q ++ ++ +++L++++ G P++SL +A ++ Y +K +P+ S E +L
Sbjct: 118 QTLSVIVATIAVLLLSIVGGHVPVISLLLAASFGFYGLVKKGLPLSPSASLAAETLILMP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL YVV+ +G FF + LI GL+ + +F K LST+G+++Y
Sbjct: 178 VALVYVVYLESTGVGTFFSHGSAHSALLISAGLVTAIPLLLFGIAAKLILLSTIGMLQYM 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P ++ +VF++ + +DT+R + F I+ I++ +YL + K K +
Sbjct: 238 TPTFQMLWAVFVVNEQLDTIRWVGFVIIWISVGIYLTDLALWRKKAKKISA 288
>gi|254507102|ref|ZP_05119240.1| RarD protein [Vibrio parahaemolyticus 16]
gi|219550097|gb|EED27084.1| RarD protein [Vibrio parahaemolyticus 16]
Length = 296
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 64/291 (21%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G ++ LWGI PLY Q+L + ++ E+++ R+L S+P F ++ + L
Sbjct: 2 SEQRLGNWMAAISFFLWGILPLYYQYLPKAAMDELLAVRLLASIPCGFIIVLAVTKSLPN 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + ++ + + ++++ W F +A+ + S +F++P++ LG LK
Sbjct: 62 WKTIWADKFSLKLTFIGSLMMSISWTAFTWAMTNDRVIDASLGFFISPLMMSALGVFVLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ + +A +L + L + G P+++L +A ++ Y + +K I S F+E
Sbjct: 122 ETLSTGKKVALVLASIGLSYQVVQYGQLPIIALIMATFFTLYGWCKKRIRYDWSTCLFME 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V+ A Y+V+ + G G +S I+ +STV
Sbjct: 182 AVVMLPLAFGYLVYKELAVGTQVLHMGWETFALYFGAAPATLIPLVFYSIAIRLTTMSTV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G+M+Y P + + +VF+ + D V+ + F + ++ +L ++ +
Sbjct: 242 GLMQYIEPSIQFMIAVFLFGEIFDEVKLVSFSFIWAGLLFTILESIRGRYR 292
>gi|154251564|ref|YP_001412388.1| transporter DMT superfamily protein [Parvibaculum lavamentivorans
DS-1]
gi|154155514|gb|ABS62731.1| RarD protein, DMT superfamily transporter [Parvibaculum
lavamentivorans DS-1]
Length = 313
Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 84/270 (31%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 37 WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
WG++ ++ + L +V EV++HR +WS+ V I+ G L L++ + + L
Sbjct: 29 WGVSVIFYKQLVEVPPFEVLAHRSVWSVVLVLAIILLLRRG-PELIVLLRDRRTMLTLAG 87
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
+A ++ +W FIY++ ++ TS Y++ P++SV LG FL ERL+ QI A L +
Sbjct: 88 TAFLIGSNWFVFIYSINEQRILETSLGYYINPLMSVLLGVAFLGERLSRPQIFAVALAFI 147
Query: 157 SLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
+L T+ G P +SL +A+T++AY + RK G EG F+E+ VL AL Y+ W
Sbjct: 148 GVLYFTVALGTLPWISLYLAITFAAYGYLRKVARAGPLEGLFVEVAVLLPLALAYLWWLS 207
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
GG F G +FL+ G + + +F++G +R +L+T+G+M+Y AP +V
Sbjct: 208 GHGGTSFGNGGWHIWMFLVLTGPMTAVPLLLFTFGAQRIRLATLGLMQYLAPTTQFFVAV 267
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
F+ +P+ + F ++ I + ++ T
Sbjct: 268 FLYGEPLIPAQVATFALIWIGLGIFSADTW 297
>gi|239827239|ref|YP_002949863.1| RarD protein, DMT superfamily transporter [Geobacillus sp. WCH70]
gi|239807532|gb|ACS24597.1| RarD protein, DMT superfamily transporter [Geobacillus sp. WCH70]
Length = 310
Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 3/292 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG- 76
+ + +G + +Y+LWGI PLY + LE +E+++HR++WS + ++
Sbjct: 2 SQANEEKIGIWYTAFSYLLWGILPLYWKLLESRPAMEILAHRIIWSFFFMVVLLIVTRQI 61
Query: 77 --GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ +K PK G ++ +A +++V+W +I+A+ TS Y++ P++SV L
Sbjct: 62 ASWRKQVSMMMKKPKLAGGIIAAAILISVNWFVYIWAVTHGHVVETSLGYYINPLVSVVL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G V LKERLN Q I+ +L + + +MT G K + S
Sbjct: 122 GVVVLKERLNLWQWISFILASIGVCVMTFQYGTFPWIALTLAFSFGIYGLVKKLASVDSA 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ P F ++ + I L LIG G + F+ G +R
Sbjct: 182 IGLTVETMVVTPISFIYLFILYDHSSLLSTLTIWQLLLLIGAGPATAVPLLYFAKGARRI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
L+ +G ++Y AP L ++S +F+ + F + A+V++
Sbjct: 242 SLTMLGFLQYIAPTLTLLSGIFLFHEAFTKAHVYTFSCIWAALVIFSFSKTK 293
>gi|307294358|ref|ZP_07574202.1| RarD protein, DMT superfamily transporter [Sphingobium
chlorophenolicum L-1]
gi|306880509|gb|EFN11726.1| RarD protein, DMT superfamily transporter [Sphingobium
chlorophenolicum L-1]
Length = 343
Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 130/291 (44%), Gaps = 1/291 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
S+ ++ G + AY WG+ P++ + L V +E++S R+LWSL ++
Sbjct: 43 SQPSSEQAVRRGLIAAIAAYATWGLLPIFFRLLHHVKPVEIVSQRILWSLLL-VAVLLLA 101
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L L L++ + + L SA ++ ++W +++A+ S YF+ P+++V L
Sbjct: 102 RRNLPALWAILRDRRLLLPLAGSALMIGMNWLTYVWAVNAGHVIAASLGYFLNPLVNVGL 161
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G + L ERL Q +A + + IM + L A+ + + +
Sbjct: 162 GVLLLHERLRRGQAVAVGIAAVGAAIMAATALTTLWISVALALTFAFYGLIRKLTPVAPM 221
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+L P + + G F +I T+ LI G + + +F+ +R
Sbjct: 222 TGLGVETLLLTPPAIGYLLWLSAHGGLGFGQDITTTVLLIVTGAVTTVPLVLFATAAQRL 281
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++T+G+++Y AP L + + + + + T + F ++ + ++++ ++
Sbjct: 282 PMATLGLLQYLAPTLQFLCGILLFGEKLTTGQMASFALIWLGLILFATDSL 332
>gi|153003675|ref|YP_001378000.1| transporter DMT superfamily protein [Anaeromyxobacter sp. Fw109-5]
gi|152027248|gb|ABS25016.1| RarD protein, DMT superfamily transporter [Anaeromyxobacter sp.
Fw109-5]
Length = 298
Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 2/296 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ ++ G + AY+ WG+ PLY + L+ V E+++HRV+WSL + +
Sbjct: 1 MTSPSSRDERSAGLAYALAAYLSWGLLPLYFKALKHVPAPEILAHRVVWSLVLLAALLAV 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + ++ +W +I+A+ + S YF+ P+++V
Sbjct: 61 RGEQGAFTAPFRGGRWRILAATTTL--ISTNWLVYIWAVNAGRIVEASLGYFMNPLVNVL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LG FL E L+ Q A L +L++ L +G + T + +
Sbjct: 119 LGVAFLGETLSGRQRAAIGLAAAGVLVLVLRAGTFPWVSLVLATSFGVYGLVRKRAAIEA 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L P + +GG F T+ L G++ + F+ G+ R
Sbjct: 179 VGGLFAETALLAPLALAFLGVRAAGGAGAFGSTPGTTVLLAAAGVITALPLVWFTLGVHR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+LST+G+++Y AP + V + ++P FG++ ++ +Y +
Sbjct: 239 LRLSTMGLVQYIAPTGQFLLGVALYREPFTRPHAAAFGLIWASLALYTWDALGRLR 294
>gi|295105949|emb|CBL03492.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Gordonibacter pamelaeae 7-10-1-b]
Length = 526
Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 83/292 (28%), Gaps = 11/292 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
G F I WG + Q + V V + R+L A + F
Sbjct: 14 KSHVARGIAFAALGGICWGFSGTCAQLMTSELGVPVAWITCVRLLLGALIFLVACL-FKN 72
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
SL + + FS + + ++ A+ + + V+ + +
Sbjct: 73 WRSLRAVLRDKRSLLRIAAFSMFGVLLTQMSYLSAISYTNAGTGTVLERLGLVVIMLIVC 132
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIP 189
V ++ ++ + + ++ I L + ++ +
Sbjct: 133 VRVRRWPKPRELFGLVFALGGTFLIATKGNIGALAIPAEGLMWGVVSAFALAAYTLLPGK 192
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
V + G FI + + + + + + +
Sbjct: 193 VLAKWGSFIVTGLAMLLGGTVATVFVQPWSIPVGITPELVGVMGAMVIIGTFAAYLFYLQ 252
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
GI A G++ P+ V S L P+ V ++V+ +++
Sbjct: 253 GITDAGPVRAGLVGCVEPVSATVISAVWLGTPVTPVDVAGIAMIVVMVLLVT 304
>gi|124516492|gb|EAY58000.1| conserved hypothetical protein [Leptospirillum rubarum]
gi|206603332|gb|EDZ39812.1| Conserved hypothetical protein [Leptospirillum sp. Group II '5-way
CG']
Length = 318
Score = 92.7 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 96/310 (30%), Gaps = 10/310 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
+A L T G L V + + + ++ + E V++ R+L LP F I +
Sbjct: 2 TRSAILRTRWGFLLVTLSAVGFAAKGIFAKIAYREGADPSTVLTLRMLCVLPVYLFGIYW 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
F + +P M++ V L + F+ P VF
Sbjct: 62 FGKKSRETRPRWGSPDFRTMVLMGLLGFDVSAVLDFEGLARVSAGMERLILFLYPTFVVF 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L + ++ I A++L + ++T S + +
Sbjct: 122 LSAYVHRKPPGARAIGASVLAYAGIALVTAGSRPTGEVSLTGFALVLGSGLFYALYLVGM 181
Query: 194 EGFFIEMCVLAIPALFY--------VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
EG L + ++ + + + + L+
Sbjct: 182 EGLLKRTNPLWLTSVVMSIATGAISIQAFLSGSLHFGRIDSRALAMILLMGLFSTLLPTF 241
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ S GI S ++ + P++ + ++ L + + + I +V+ + + L
Sbjct: 242 LMSVGISLIGASRAAVISFLGPVVTLFLAMVFLGEKLTYLEGIGTVVVLGGVALITLWKE 301
Query: 306 INSGKNKTKK 315
K +K
Sbjct: 302 SRPEVQKKRK 311
>gi|225021949|ref|ZP_03711141.1| hypothetical protein CORMATOL_01981 [Corynebacterium matruchotii
ATCC 33806]
gi|224945235|gb|EEG26444.1| hypothetical protein CORMATOL_01981 [Corynebacterium matruchotii
ATCC 33806]
Length = 292
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 72/289 (24%), Positives = 147/289 (50%), Gaps = 3/289 (1%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
F AY+LWGI P + L + LE+I HR++W+ + + G S L+ +
Sbjct: 3 FAIAAYVLWGIFPAFFPLLTPAAPLEIIGHRIVWTAVVMSIIMSCTKTGWSELRR--ASV 60
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ G L ++ ++A +W ++ A+ + + Y++ P+++V LG VFL ERL LQ
Sbjct: 61 RTWGWLGLASVLVATNWLVYVIAVNSNHVADAALGYYINPLVNVLLGLVFLSERLRPLQK 120
Query: 149 IAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ + ++ ++ + P+ +L +A ++ Y +K + + + E +LA A
Sbjct: 121 TSITVAATAVVMLTIIAGQPPVQALMLAFSFGFYGLVKKRVEMSAMASLTAETLILAPVA 180
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
Y++ G F ++ +L L+ GL+ + +F +R +LST+G+++Y P
Sbjct: 181 AGYLLVLEARGTGTFGHVSVGHSLLLMTAGLVTAVPLLLFGIAARRIQLSTIGMLQYLTP 240
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ ++ +VF+ ++ I +R + FGI+ +A+ +Y L + N +K+
Sbjct: 241 TMQMLWAVFVTREEIAPLRWVAFGIIWVAVALYFLDILRFRSTNGRRKA 289
>gi|120553275|ref|YP_957626.1| transporter DMT superfamily protein [Marinobacter aquaeolei VT8]
gi|120323124|gb|ABM17439.1| RarD protein, DMT superfamily transporter [Marinobacter aquaeolei
VT8]
Length = 298
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 1/294 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G ++ AY LWG PLY + + EV+ HRV+WS + I
Sbjct: 5 NDTTKGVVYGLGAYTLWGSFPLYFALFKGIPSWEVLIHRVIWSCLFLAVVISILKR-WPP 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ P+ +G ++ A +A++WG +IYA+ TR S YF+TP+++V +G + L
Sbjct: 64 VVAALRQPRRLGYVLGCAVFIALNWGIYIYAVETRHVLQASLGYFLTPLVNVAMGLLILG 123
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ LQ A L +++L L G + +
Sbjct: 124 ERISRLQAAAVGLAAVAILYQLLLLGELPWITLVLAFSFGTYGLMRKKVELDGLSGLFVE 183
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L +P + S G F + L L G + + F+ +R KLSTVG
Sbjct: 184 TLLLLPLGLLTLAWLSSQGLSHFSDSTYSALLLASSGAVTAIPLLAFAGAARRLKLSTVG 243
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P + + +++I +P+ T + + F ++ +A+ +Y + +
Sbjct: 244 FLMYINPTIQFLIALYIFHEPLSTAKLVSFVMIWVALAIYSWSAWVGRSNREAS 297
>gi|328951145|ref|YP_004368480.1| protein of unknown function DUF6 transmembrane [Marinithermus
hydrothermalis DSM 14884]
gi|328451469|gb|AEB12370.1| protein of unknown function DUF6 transmembrane [Marinithermus
hydrothermalis DSM 14884]
Length = 292
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 101/297 (34%), Gaps = 10/297 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T MG + + A + WG+ + E + LEV R + G
Sbjct: 2 TPMGYVLILLAAVCWGLIGPVAKLAFREGMEPLEVAFWRAALGGVLFGAHAAWRRSGR-- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ F + + +G + A+ L S + P +G ++L
Sbjct: 60 ----VAREHLGVLVAFGLVGVTLFYGAYQLAVEQGGAALASVLLYTAPAWVAGMGVLWLG 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK--TIPVGSSEGFFI 198
ERL +++A + +L ++ + L + AV W G
Sbjct: 116 ERLTPAKLVALGMTVLGVVGVALGGSAEVRPSVSAVGWGLVSGLAYALYYLFGKRYFERY 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +L AL + L G+ + +++ G+KR + +
Sbjct: 176 DPALLYAYALPVGAVGLLPWVSFSAKTPVAWGALLGLVGVSTYLAYLLYAEGLKRVEATR 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ P++ V + + ++ + G+++ A+VV + ++ + +
Sbjct: 236 ASIVATLEPVVAAVLAYVWWGERFGPLQYVGAGLILAAVVVAVQGGRVSPRTERGAR 292
>gi|325927289|ref|ZP_08188543.1| rarD protein [Xanthomonas perforans 91-118]
gi|325542290|gb|EGD13778.1| rarD protein [Xanthomonas perforans 91-118]
Length = 302
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 3/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S G L ++LWG+ P+Y L+ V L++I+HR++WS V ++ SG L
Sbjct: 5 SSQEARRGLLITASTFVLWGLVPVYWHLLKAVPSLQIIAHRIVWSTVLVVAWLLASSG-L 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+GML S+ +A +WG +I+A+ S YF+ P++SV LG +
Sbjct: 64 GWWRSIAAQPRALGMLAGSSVAIAFNWGLYIWAINAGHVIEASLGYFINPLLSVLLGVLV 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL +Q +A +L +T+ +G P ++L +AV++ Y RK + V G
Sbjct: 124 LKERLRRIQWVAVACAAAGVLWLTIDAGAPPWIALGLAVSFGIYGLLRKLVAVDPVAGLG 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PAL W G F G T ++ G++ + F+YG++R L
Sbjct: 184 VESVYLFVPALLLAAWGEQGHGGAFLSGWSLRTDAMLIFGGVVTALPLIGFAYGVRRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S VGI++Y AP L ++ V+ +P D R + F + + +++++ +V+ S +
Sbjct: 244 SLVGILQYIAPSLQLLLGVWFFHEPFDQGRAMGFAAIWVGLLLFVGDSVVRSRQ 297
>gi|14520295|ref|NP_125770.1| hypothetical protein PAB0040 [Pyrococcus abyssi GE5]
gi|5457510|emb|CAB49001.1| Integral membrane protein (DUF6 family) [Pyrococcus abyssi GE5]
Length = 295
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 103/282 (36%), Gaps = 9/282 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S G + VF A +WG ++ +FL +S +I +RV ++L +F +
Sbjct: 17 SKAMRGGYILVFLAASMWGTLGIFAKFLYKFNLSTYTIIFYRVTFALVFLFIYLKAKGMP 76
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + ++ LK ++++ + + + + Y + + P S G +
Sbjct: 77 ILIPRERLK-----FYIIYAFFSIFLFYSLYFYTVKISSVSFAVLMLYTAPAYSTIFGRL 131
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
KE + ++IA L+I + + L+SG + A V +
Sbjct: 132 IFKEEITQRKLIAVALVIAGV--LILNSGEISFTGKAIAVGLASGLTYALYGVFAKMAVN 189
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E + + + F + L + +++ +K ++S
Sbjct: 190 KEEPEQVLFNVLLIGAIFLLPFTSFKVPLQSVPYLLALAFFPTFLGYILYNRALKSVEVS 249
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P++ +V + I + + ++ I +++ ++
Sbjct: 250 RASVVATIEPVVAMVLAFLIFGEKLTIIQLIGASMIIGGAIL 291
Score = 42.2 bits (97), Expect = 0.097, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 44/128 (34%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+A + + + + AL ++ + G + +
Sbjct: 28 FLAASMWGTLGIFAKFLYKFNLSTYTIIFYRVTFALVFLFIYLKAKGMPILIPRERLKFY 87
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+I + ++ Y +K + +S +M YTAP + I K+ I + I +
Sbjct: 88 IIYAFFSIFLFYSLYFYTVKISSVSFAVLMLYTAPAYSTIFGRLIFKEEITQRKLIAVAL 147
Query: 293 VVIAMVVY 300
V+ +++
Sbjct: 148 VIAGVLIL 155
>gi|308178193|ref|YP_003917599.1| RarD protein [Arthrobacter arilaitensis Re117]
gi|307745656|emb|CBT76628.1| RarD protein [Arthrobacter arilaitensis Re117]
Length = 312
Score = 92.7 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 137/298 (45%), Gaps = 4/298 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + G + AY++WG+ P + L +S E + RV++SL ++ F
Sbjct: 5 TAKPIRSEHSYGLIQGTAAYLIWGMLPAFFLLLPAISAFEFVGVRVIYSLIFCLL-LLAF 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+G K+ K + L ++ ++A +W + A+LT S YF+ P++++ L
Sbjct: 64 TGQFKQFAKMFKDSKTMWQLGLASVLIAANWVLYALAVLTGHVLEASLGYFINPIVAILL 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVG 191
G + LKE+L LQ +A + ++++++T+ G A + + +
Sbjct: 124 GVIVLKEKLRSLQWVAVAVATVAVIVLTVGLGRVPWISLGLAFSFGFYGLVKNKVGQSGT 183
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ IE L A+ Y++W +G F ++P L L G++ + +F
Sbjct: 184 ALGSLTIETLWLTPLAIAYLIWLAVNGQSALFSADVPGHLLLAASGIITAVPLLLFGGAA 243
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+R LSTVG +++ APLL + + + + + R + FG+V +A++ L+ +
Sbjct: 244 RRLPLSTVGSLQFLAPLLQFILGLAVFGEHMPFERWVGFGLVWVAVIFVLVDMLRTPR 301
>gi|213422464|ref|ZP_03355530.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 269
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 2/266 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFM-VALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFSIADSATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDT 284
+G +Y P LM + +V +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGA 267
Score = 37.2 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 40/128 (31%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
+ A + + V + E + + + + L L
Sbjct: 18 FIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVALLSVSRQWRQVKRLLKTPKKIFLLA 77
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+L + +F + + + + + PL+ I+ + L + ++ + + V
Sbjct: 78 LSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFLGERFRRMQWLAVILAV 137
Query: 295 IAMVVYLL 302
++V L
Sbjct: 138 CGVLVQLW 145
>gi|326383073|ref|ZP_08204762.1| RarD protein, DMT superfamily transporter [Gordonia neofelifaecis
NRRL B-59395]
gi|326198209|gb|EGD55394.1| RarD protein, DMT superfamily transporter [Gordonia neofelifaecis
NRRL B-59395]
Length = 299
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 66/291 (22%), Positives = 136/291 (46%), Gaps = 4/291 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L F AY +WG+ PL + E++++R+LW+L + A + F S +K
Sbjct: 4 RGVLAGFGAYAIWGLFPLLFDAMLPAGPWEILANRILWTLV-LCVAALAFMRDWSWIKPL 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + +A ++A +W ++ A+ + + YF+ P+ +V LG V L+ERL
Sbjct: 63 RRQSRLLAGVTAAALLIAGNWIVYVAAVTSGHTSDAALGYFLNPLATVALGVVVLRERLR 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGSSEGFFIEMC 201
LQ A + +++ + L +G + A + + + +E
Sbjct: 123 PLQWAAVAVGVVAGAYLALAAGTFPTTALALAGTFALYGLVKKKVGDTLPALHSLSLETA 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L+ A+ +V F+ F T LI G + +F+ +R L T+G+
Sbjct: 183 ILSPAAVVILVVVAFTPAGLTFGDGAGHTALLIFSGAATAVPLLLFAAAARRIPLVTIGL 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+++ P++ ++ +V +L + + R I FGIV +A+++ +V+ + N+
Sbjct: 243 IQFITPIMQLLCAVLVLGEQLPPERWIGFGIVWVALILLATDSVLRAWTNR 293
>gi|14590024|ref|NP_142088.1| hypothetical protein PH0070 [Pyrococcus horikoshii OT3]
gi|3256456|dbj|BAA29139.1| 275aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 275
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 105/278 (37%), Gaps = 9/278 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L VF A +WG ++ +FL +S ++ +RV+++L +F + + +
Sbjct: 1 MRGYLLVFLAASMWGTLGIFAKFLYRYNLSTYTIVFYRVIFALIFLFIYLKIKKIPILIP 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K+ LK + + + + + + Y + + P S LG + E
Sbjct: 61 KERLK-----FYIAYGFFSIFLFYSLYFYTVKISSVSFAVLMLYTAPAYSTILGKLIFNE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+N +++A +L+I ++ + L +A S + +A + +
Sbjct: 116 EINKKKLLAVILVIGGVISLNYGGISFSLKAIVAGLTSGFTYALYGVFAKMAVSKEEPER 175
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + + F + + + +++ +K ++S +
Sbjct: 176 VLF--NVLLIGAIFLIPFTDFKIPPESLPYLIALAFFPTFLGYILYNTALKTVEVSKASV 233
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P++ + + I + + V+ I +++ ++
Sbjct: 234 IATIEPVVAMTLAFIIFGEELSIVQLIGASMIIGGALL 271
Score = 39.1 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 44/138 (31%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+A + + + + I AL ++ + +
Sbjct: 8 FLAASMWGTLGIFAKFLYRYNLSTYTIVFYRVIFALIFLFIYLKIKKIPILIPKERLKFY 67
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ + ++ Y +K + +S +M YTAP + I + I+ + + +
Sbjct: 68 IAYGFFSIFLFYSLYFYTVKISSVSFAVLMLYTAPAYSTILGKLIFNEEINKKKLLAVIL 127
Query: 293 VVIAMVVYLLPTVINSGK 310
V+ ++ + S K
Sbjct: 128 VIGGVISLNYGGISFSLK 145
>gi|77410454|ref|ZP_00786815.1| rarD protein [Streptococcus agalactiae CJB111]
gi|77163402|gb|EAO74352.1| rarD protein [Streptococcus agalactiae CJB111]
Length = 295
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 67/291 (23%), Positives = 147/291 (50%), Gaps = 7/291 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLL 81
+G + AY+LWG+ LY + L + ++R+++++ + ++ L L
Sbjct: 6 LGIILGLSAYVLWGLLSLYWKLLSGIEAYSTFAYRIIFTVLTMLIYMLVSGRKTVYLKDL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + N K+ + ++ +++++W +I+A+ S Y++ P+IS+ L + L+E
Sbjct: 66 KGLVNNKKSFWTMFVASILISINWLVYIFAVTHGHATEASLGYYMMPIISILLSVLVLRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + +A L+ I+ + ++ +G PL+SL +A+++ Y +K+I + S +E
Sbjct: 126 HLARVVSLAILIAIMGVGVLVYQTGHFPLISLTLALSFGFYGLLKKSISLSSDFSMLVES 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+A AL Y+V+ + + + L G++ + +F+ IKRA L+ +G
Sbjct: 186 SFIAPFALIYIVFFAKDFLTDYNI---LQLVLLSLSGIITAVPLLLFAEAIKRAPLNIIG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y P + ++ ++FI K+ I + I F + +A++V+ + V K
Sbjct: 243 FIQYINPTIQLLLALFIFKETIVSGEIIGFIFIWLAILVFSIGQVHTMLKK 293
>gi|254292641|ref|YP_003058664.1| RarD protein, DMT superfamily transporter [Hirschia baltica ATCC
49814]
gi|254041172|gb|ACT57967.1| RarD protein, DMT superfamily transporter [Hirschia baltica ATCC
49814]
Length = 302
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 2/298 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ + P G + A++LWG PLY + LE + L V++ R++WSLP A+V+F
Sbjct: 5 QDGNTPVQAGLICALGAFLLWGFLPLYFKILENLPALHVLAERIVWSLPA-GIALVWFGH 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
S + + PK + L SA ++ ++W FI+A S F+TP+ S L +
Sbjct: 64 RSSEFRAVFRAPKQLAWLCLSAGLMGLNWLIFIWAAQNGHVLEASLGAFITPLFSFSLAA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
VF KER + LQ IA L +L + G A + V
Sbjct: 124 VFFKERFSFLQFIAIFFTTLGVLNQAIFVGKLPWIALSLCLLFGSYGAIRKKLVVDGRVG 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F+ ++ P + + G + D+ + G++ + +F+ R +L
Sbjct: 184 FLLEVLVLFPFAMAFLIYSWIHGAPLIADTVRDSALISLSGVVTAGPLILFTMAATRLRL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S++ +M+Y AP + + +L + F + I + +Y + + + K
Sbjct: 244 SSLAVMQYIAPSIQFLVG-LLLGEHFSISYAATFIFIWIGVALYAGAALRQNRQVKKN 300
>gi|296269705|ref|YP_003652337.1| hypothetical protein Tbis_1731 [Thermobispora bispora DSM 43833]
gi|296092492|gb|ADG88444.1| protein of unknown function DUF6 transmembrane [Thermobispora
bispora DSM 43833]
Length = 379
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 26/281 (9%), Positives = 71/281 (25%), Gaps = 6/281 (2%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG L+ + L S ++++ R+L + + ++ + + V ++
Sbjct: 31 WGSGFLWVKLALRGFSAVQIVFIRLLLAFLVLAPMVLARGLPWPRGRRIWAHLFVVALVS 90
Query: 96 FSATILAVHWGFFIYALLTRQGFL-----TSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ + + + + +
Sbjct: 91 NAVPFVLIGMAEETIGSNVAGVLNATTPIWTLLVAFAAGVDRHVTLPKAAGLTLGFLGAV 150
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
L G A A + + + + + L +
Sbjct: 151 VLFAPWQAANEIASPGGLAGLTAAACYGFGFVYTGRFLAGRGISPLVLSASQLGAATVQL 210
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
V F+G LI L F I I+ + + Y P++
Sbjct: 211 AVVMPFAGLTPPTWRVDAVASLLILSVLGTGLAFVINFRVIEEDGPTIASTVTYLVPVVA 270
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ +L + + +++ + + +G+
Sbjct: 271 VLLGWLVLGESVTATMLAGIVLILGGVALTRRHPAELAGRR 311
>gi|319745096|gb|EFV97421.1| DMT superfamily drug/metabolite transporter [Streptococcus
agalactiae ATCC 13813]
Length = 295
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 67/291 (23%), Positives = 147/291 (50%), Gaps = 7/291 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLL 81
+G + AY+LWG+ LY + L + ++R+++++ + ++ L L
Sbjct: 6 LGIILGLSAYVLWGLLSLYWKLLSGIEAYSTFAYRIIFTVLTMLIYMLVSGRKTVYLKDL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + N K+ + ++ +++++W +I+A+ S Y++ P+IS+ L + L+E
Sbjct: 66 KGLVNNKKSFWTMFVASILISINWLVYIFAVTHGHATEASLGYYMMPIISILLSVLVLRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + +A L+ I+ + ++ +G PL+SL +A+++ Y +K+I + S +E
Sbjct: 126 HLARVVSLAILIAIMGVGVLVYQTGHFPLISLTLALSFGFYGLLKKSISLSSDFSMLVES 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+A AL Y+V+ + + + L G++ + +F+ IKRA L+ +G
Sbjct: 186 SFIAPFALIYIVFFAKDFLTDYNI---LQLVLLSLSGIITAVPLLLFAEAIKRAPLNIIG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y P + ++ ++FI K+ I + I F + +A++V+ + V K
Sbjct: 243 FIQYINPTIQLLLALFIFKETIVSGEVIGFIFIWLAILVFSIGQVHTMLKK 293
>gi|90408542|ref|ZP_01216699.1| rarD protein [Psychromonas sp. CNPT3]
gi|90310361|gb|EAS38489.1| rarD protein [Psychromonas sp. CNPT3]
Length = 295
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 91/289 (31%), Positives = 157/289 (54%), Gaps = 2/289 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T +G + AY++WG +PLY ++L + + E++SHRV+WSL I++ S+
Sbjct: 5 TETQVGMFYAVAAYMIWGFSPLYFKYLADLPIYEMLSHRVIWSLLITALMIIFMGRY-SV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK L PK + L S+ +++ +WG F++A+ + S YF+ P+I+V LG VFLK
Sbjct: 64 LKSILSQPKKLIFLAISSLLISCNWGVFVWAINNDRMLDASLGYFINPLINVLLGLVFLK 123
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ LQ +A L ++ + I + G P +SL + +++ Y RK I V + GFFIE
Sbjct: 124 ESLSRLQWVAVSLALIGVSIQVIALGSLPWISLVLPFSFAFYGLLRKKIKVDALIGFFIE 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
C +A A++Y+ S + L + LI G++ +F F+ R LST+
Sbjct: 184 TCFIAPVAIYYMFVVANSSTSNMLLNSFTLNSALIFAGVMTAFPLIFFTQAALRLALSTL 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G +Y AP L+ V +V + +P+D ++ F + + ++V++ I+
Sbjct: 244 GFFQYLAPTLLFVFAVVLYDEPLDILKISTFTFIWLGILVFIFEKQISR 292
>gi|84684678|ref|ZP_01012578.1| RarD [Maritimibacter alkaliphilus HTCC2654]
gi|84667013|gb|EAQ13483.1| RarD [Rhodobacterales bacterium HTCC2654]
Length = 311
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 10/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G + A ++WG++ +Y + L V EV++HR LWS + +L
Sbjct: 2 SETGKGIAAIAGACVIWGLSSIYYKALAHVPPEEVLAHRTLWSFVFFAGVLAVQGRLGAL 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +A +++ +W FFIY++ T + S Y++ P+++V LG V +
Sbjct: 62 RGLIGSRRVWQVL--LAAVMISTNWFFFIYSVQTGRALGASLGYYIFPLVAVLLGVVIFR 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL IA ++ L++ I+T G P +SL +A T+ Y +K + G E
Sbjct: 120 ERLRFGHGIAVVMAALAVAILTWGLGQAPWISLLLATTFGFYGVVKKGLDAGPVASVTAE 179
Query: 200 MCVLAIPALF-------YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ +L A+ + F ++ D+L L G+L + +FSY +
Sbjct: 180 VTLLLPLAVLWLVGVHAFGWTGITGRNLAVFGDDLRDSLLLAFSGVLTATPLILFSYAAR 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
R +G+MEY P L + + I + + I I+ +A+ +Y ++
Sbjct: 240 RLGYGLLGLMEYINPTLQFLVASMIFGELVTRWHMIALPIIWVALALYSWVSLRQDR 296
>gi|22537276|ref|NP_688127.1| rarD protein [Streptococcus agalactiae 2603V/R]
gi|25011236|ref|NP_735631.1| rarD protein [Streptococcus agalactiae NEM316]
gi|76787365|ref|YP_329824.1| rarD protein [Streptococcus agalactiae A909]
gi|76797920|ref|ZP_00780182.1| rarD protein [Streptococcus agalactiae 18RS21]
gi|77405826|ref|ZP_00782909.1| rarD protein [Streptococcus agalactiae H36B]
gi|77408695|ref|ZP_00785427.1| rarD protein [Streptococcus agalactiae COH1]
gi|77413008|ref|ZP_00789210.1| rarD protein [Streptococcus agalactiae 515]
gi|22534145|gb|AAM99999.1|AE014243_6 rarD protein [Streptococcus agalactiae 2603V/R]
gi|23095660|emb|CAD46844.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562422|gb|ABA45006.1| rarD protein [Streptococcus agalactiae A909]
gi|76586757|gb|EAO63253.1| rarD protein [Streptococcus agalactiae 18RS21]
gi|77160906|gb|EAO72015.1| rarD protein [Streptococcus agalactiae 515]
gi|77172670|gb|EAO75807.1| rarD protein [Streptococcus agalactiae COH1]
gi|77175536|gb|EAO78322.1| rarD protein [Streptococcus agalactiae H36B]
Length = 295
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 68/291 (23%), Positives = 147/291 (50%), Gaps = 7/291 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLL 81
+G + AY+LWG+ LY + L + ++R+++++ + ++ L L
Sbjct: 6 LGIILGLSAYVLWGLLSLYWKLLSGIEAYSTFAYRIIFTVLTMLIYMLVSGRKTVYLKDL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + N K+ + ++ +++++W +I+A+ S Y++ P+IS+ L + L+E
Sbjct: 66 KGLVNNKKSFWTMFVASILISINWLVYIFAVTHGHATEASLGYYMMPIISILLSVLVLRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + +A L+ I+ + I+ +G PL+SL +A+++ Y +K+I + S +E
Sbjct: 126 HLARVVSLAILIAIMGVGILVYQTGHFPLISLTLALSFGFYGLLKKSISLSSDFSMLVES 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+A AL Y+V+ + + + L G++ + +F+ IKRA L+ +G
Sbjct: 186 SFIAPFALIYIVFFAKDFLTDYNI---LQLVLLSLSGIITAVPLLLFAEAIKRAPLNIIG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y P + ++ ++FI K+ I + I F + +A++V+ + V K
Sbjct: 243 FIQYINPTIQLLLALFIFKETIVSGEVIGFIFIWLAILVFSIGQVHTMLKK 293
>gi|305681124|ref|ZP_07403931.1| protein RarD [Corynebacterium matruchotii ATCC 14266]
gi|305659329|gb|EFM48829.1| protein RarD [Corynebacterium matruchotii ATCC 14266]
Length = 292
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 71/289 (24%), Positives = 147/289 (50%), Gaps = 3/289 (1%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
F AY+LWGI P + L + LE+I HR++W+ + + G L+ +
Sbjct: 3 FAIAAYVLWGIFPAFFPLLTPAAPLEIIGHRIVWTAVVMSIIMSCTKTGWLELRR--ASV 60
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ G L ++ ++A +W ++ A+ + + Y++ P+++V LG VFL ERL LQ
Sbjct: 61 RTWGWLGLASVLVATNWLVYVIAVNSNHVADAALGYYINPLVNVLLGLVFLSERLRPLQK 120
Query: 149 IAALLIILSLLIM-TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ + +++++ + P+ +L +A ++ Y +K + + + E +LA A
Sbjct: 121 TSITVAATAVVMLTIIAGQPPVQALMLAFSFGFYGLVKKRVDMSAMASLTAETLILAPVA 180
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
Y++ G F ++ +L L+ GL+ + +F +R +LST+G+++Y P
Sbjct: 181 AGYLLVLEARGTGTFGHVSVGHSLLLMTAGLVTAVPLLLFGIAARRIQLSTIGMLQYLTP 240
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ ++ +VF+ ++ I +R + FGI+ +A+ +Y L + N +K+
Sbjct: 241 TMQMLWAVFVTREEIAPLRWVAFGIIWVAVALYFLDILRFRSTNGRRKA 289
>gi|330468050|ref|YP_004405793.1| hypothetical protein VAB18032_20465 [Verrucosispora maris
AB-18-032]
gi|328811021|gb|AEB45193.1| hypothetical protein VAB18032_20465 [Verrucosispora maris
AB-18-032]
Length = 318
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 88/301 (29%), Gaps = 17/301 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL-- 80
MG + +G ++ + VS ++ R + + ++ G
Sbjct: 1 MGAALCLLSAACFGAMAIFGKLAYDAGVSPGALLLVRFSLAAVLLGMVLLVRPGLRHAGA 60
Query: 81 -------LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + A A F AL L + + PV+
Sbjct: 61 RTVGAAGRAPMRRGRVLAVAVGLGAVGYATQASLFFSALQRMDASLLALILYTYPVMVTV 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP---- 189
+ ++RL+ + A + L++ L +G A+ A
Sbjct: 121 VAVALGRDRLSPARGAALVAASAGTLLVLLGAGGVSFHPVGALLAFASAVTYTVYILVAD 180
Query: 190 --VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
V + + VL A V +GG G + F
Sbjct: 181 TVVHRLAPAVLSVLVLTGAAGTLGVRALLTGGVDLGFGPSGWFWLACIAVVSTVVAMLTF 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G+KR ST I+ P++ + +L + + V+ + +V+ ++ V L
Sbjct: 241 FAGLKRTGPSTAAILSTFEPVVTAALATLVLGESLTPVQLLGGVLVLSSVAVLQLRRTRR 300
Query: 308 S 308
Sbjct: 301 Q 301
>gi|300933334|ref|ZP_07148590.1| putative RarD protein [Corynebacterium resistens DSM 45100]
Length = 293
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 65/283 (22%), Positives = 147/283 (51%), Gaps = 4/283 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ AY++WG+ P + L+ + +E+++HR +W+L + ++ S+ +
Sbjct: 1 MIWGLAAYLMWGVFPAFFPLLKPAAPVEILAHRFIWTLVFMTIVVIAVGAVKSMRQIPAA 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V +A +++ +WG +IYA+ Q + YF+ P+++V L V L+E L L
Sbjct: 61 QWLKVAA---AAVLISFNWGLYIYAVNNNQVADAALGYFINPLVTVVLAVVVLRESLRPL 117
Query: 147 QIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q+++ + ++++I+T+ G P +++L +A+++ Y +K + + + E VLA
Sbjct: 118 QLLSVAIAAVAVIILTVALGQPPIVALGLALSFGLYGLVKKQVKLTPIQSLTAETLVLAP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ Y+++ G F L LI G++ + +FS + L+++G+++Y
Sbjct: 178 LGVAYLLYLQAQGQNTFVQHGPSHALLLITAGIVTAVPLLLFSKAAQEMSLTSLGMIQYI 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P++ ++ +VF+ + I R I F I+ +A++++L +
Sbjct: 238 TPVMQMLWAVFVNHETIPAARWIGFCIIWVAVIIFLFDMAKHR 280
>gi|294794292|ref|ZP_06759428.1| protein RarD [Veillonella sp. 3_1_44]
gi|294454622|gb|EFG22995.1| protein RarD [Veillonella sp. 3_1_44]
Length = 298
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 132/293 (45%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI--VYFSG 76
+ G + YI+WG+ PLY L VS +++ R++WS + + ++F
Sbjct: 1 MDHTSKKGLITALSCYIIWGLLPLYWALLNHVSPYNILAQRIIWSGICMAIVVFGLHFKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L+ +A I++V+W +I+A+ Q TS Y++ P+ +V LG
Sbjct: 61 FKKDFQLLKEQRSQLFLLLVAAVIISVNWFTYIWAIANNQVMNTSLGYYINPLFNVVLGV 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ KE L+ + ++ L+ + + ++T G L I A K + S
Sbjct: 121 ILFKEVLSIPKKLSVLIATIGIALLTYQVGSLPLVSMILAVSFGLYGAVKKKLLISPFTS 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L P + +F + T+ LI GL S +FSYG + L
Sbjct: 181 IAFEAWLLTPLALLYTTMVDNTVWSYFGTDWYTTILLIACGLTTSVPLVLFSYGAQLLPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +G ++Y +P + ++ ++F + T + I FG + IA+V++ L + I +
Sbjct: 241 NLLGFLQYVSPTIALLLAIFYFGESFGTPQMIAFGCIWIALVLFSLSSQITTR 293
>gi|51245198|ref|YP_065082.1| integral membrane protein RarD [Desulfotalea psychrophila LSv54]
gi|50876235|emb|CAG36075.1| related to integral membrane protein (RarD) [Desulfotalea
psychrophila LSv54]
Length = 297
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 83/289 (28%), Positives = 151/289 (52%), Gaps = 3/289 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L A+ +WG P++ + + V LEV+ HR +WSL F ++ F +
Sbjct: 1 MQRYFGVLAATAAFTMWGSLPVFWKQIAMVPSLEVLCHRTVWSLVLTLFIVLAFGRRRKV 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + V +L SA ++A +W I+A+ + TS YF++P+I+V L +F
Sbjct: 61 VAAMTR--ENVKILTISALLVAANWLLSIWAINSGYIVATSLGYFISPLINVALAYLFFA 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL Q +A LL + +++ + ++ G P ++L +AV+++ Y K I V + + FIE
Sbjct: 119 ERLRRAQSLALLLALSAVVYLAVYYGEFPWIALGLAVSFAIYGAMHKRITVSALDALFIE 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+LA+PA Y+VW + G FF + FL+G G++ + F Y + +L T+
Sbjct: 179 TLILALPAAGYLVWLQYRGIGSFFAHGTEVSFFLMGGGVVTTIPLLCFGYAAQHLRLGTL 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
GI +Y P L +V VF+ + + R + F ++ +A+++Y+
Sbjct: 239 GIFQYLTPSLSLVIGVFLYSEAFPSERMVGFSLIWLALLLYMGEGFFQR 287
>gi|149186027|ref|ZP_01864342.1| rarD protein [Erythrobacter sp. SD-21]
gi|148830588|gb|EDL49024.1| rarD protein [Erythrobacter sp. SD-21]
Length = 300
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/294 (27%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A+ G AY++WG PLY + V +E + R++W+LP + IV
Sbjct: 4 TATEHPRTGLWAALGAYLIWGFLPLYLILVRSVPAMEFVGWRIIWTLP-LCLLIVAVRKQ 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L+ L NP+ +G L SAT++AV+W +++A+ + + S Y++ P+I+V LG++
Sbjct: 63 LPQLRAALSNPRTMGWLFLSATLIAVNWVVYVWAIQSNYVYAASLGYYINPLINVLLGTL 122
Query: 138 FLKERLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
LKERL+ Q +A L + + L++ +SL +A+++ Y RK + VG+ G
Sbjct: 123 LLKERLSRAQWVAVALAAVGVSLLLGGALTTLWISLTLALSFGTYGLIRKQVDVGALPGL 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE VL +PA + + F +L ++ G L +F +F+ +R
Sbjct: 183 TIESLVLLVPASVVAFYYAGTPAGSAFTQETGLSLAIMLGGALTAFPLLMFAIAARRLPY 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
ST+G +++ AP ++ + + + + + V+ F + A +++ V S K
Sbjct: 243 STLGFIQFLAPSIVFILGLTVFGEELKPVQAACFACIWAAAAIFVWDLVARSRK 296
>gi|56709131|ref|YP_165176.1| hypothetical protein SPOA0349 [Ruegeria pomeroyi DSS-3]
gi|56680816|gb|AAV97481.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 319
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 96/291 (32%), Gaps = 7/291 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G + + ++ + + L SV ++I L+S + ++ +
Sbjct: 8 LQGMAYALAGFAVFSLHDALIKALGAGYSVFQIIFFATLFSFVPITVTMLA------DRR 61
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
P G+++ + ++ YA F P++ L L E
Sbjct: 62 VDTFRPNNPGLVLLRSGLMVGSMVSAFYAFSQLPLTEVYTLLFTFPLLVTALSVPLLGEV 121
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + ++ +LI+ L +A +A C A TI V +
Sbjct: 122 VRAQRWAAVGIGLIGVLIVLRPGMSALTLGHLAALTAAVCSALATILVRKIGNSERSAVL 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ P L + G + + + G+++ + + A + V +
Sbjct: 182 ILYPMLLGALAMGAMQPLVYRPPELVHLGMMALVGVMSFAAQHLIIQAYRAAPPAVVSPI 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+Y+ + + + + D + GI++ + + + + ++
Sbjct: 242 QYSQIVWATLLGAVLFGERPDGWVALGAGIIIASGLFVVWRESRANVSTRS 292
>gi|294792496|ref|ZP_06757643.1| protein RarD [Veillonella sp. 6_1_27]
gi|294456395|gb|EFG24758.1| protein RarD [Veillonella sp. 6_1_27]
Length = 298
Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI--VYFSG 76
+ G + YI+WG+ PLY L VS +++ R++WS + + ++F
Sbjct: 1 MEHTSKKGLITALSCYIIWGLLPLYWALLNHVSPYNILAQRIIWSGVCMAIVVFGLHFKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L+ +A I++V+W +I+A+ Q TS Y++ P+ +V LG
Sbjct: 61 FKKDFQLLKEQRSQLFLLLIAAVIISVNWFTYIWAIANNQVMNTSLGYYINPLFNVVLGV 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ KE L+ + ++ L+ + + ++T G L I A K + S
Sbjct: 121 ILFKEVLSIPKKLSVLIATIGIALLTYQVGSLPLVSMILAISFGLYGAVKKKLLISPFTS 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L P + +F N T+ LI GL S +FSYG + L
Sbjct: 181 IAFEAWLLTPLALLYTTMVDNTVWSYFGTNWYTTMLLIACGLTTSVPLVLFSYGAQLLPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +G ++Y +P + ++ ++F + T + I FG + IA+V++ L + I +
Sbjct: 241 NLLGFLQYVSPTIALLLAIFYFGESFGTPQMIAFGCIWIALVLFSLSSQITTR 293
>gi|302543415|ref|ZP_07295757.1| RarD protein [Streptomyces hygroscopicus ATCC 53653]
gi|302461033|gb|EFL24126.1| RarD protein [Streptomyces himastatinicus ATCC 53653]
Length = 347
Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 69/285 (24%), Positives = 144/285 (50%), Gaps = 2/285 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L+ F AY LWG+ PL+ L+ +E+++HR++WSL V ++ S +
Sbjct: 21 RAGLLYGFAAYGLWGLAPLFWPLLQPAGAVEILAHRMVWSLVVVGLLLLVLRR-WSWVGP 79
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ P+ +G++ +AT ++V+WG +I+ + + T+ YF+ P++S+ G + L+ERL
Sbjct: 80 LVRQPRRLGLVALAATAISVNWGLYIWGVNSGHVVETALGYFINPLVSIGFGVLLLRERL 139
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q A + ++++ ++ + G P ++L +A +++ Y +K I + E E V
Sbjct: 140 RPAQWAAVGVGVVAVGVLAVGYGKLPWIALTLAFSFATYGLVKKRIGLDGLESLAAETAV 199
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+PAL ++ + G F G + + L+ G++ + +F R LST+G++
Sbjct: 200 QFLPALGFLGYLTMRGDSTFGSGGMGHSALLVSCGVITAGPLILFGAAAVRLPLSTIGML 259
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y P + + + + + R F +V +A+ + +
Sbjct: 260 QYLTPTSQFILGLVVFHEYMPPERWAGFALVWLALALLTWDALRT 304
>gi|254173167|ref|ZP_04879840.1| permease, DMT superfamily [Thermococcus sp. AM4]
gi|214032576|gb|EEB73405.1| permease, DMT superfamily [Thermococcus sp. AM4]
Length = 284
Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 96/279 (34%), Gaps = 8/279 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G VF A +WG ++ ++ V ++ RVL++L + I F
Sbjct: 2 KRGYFLVFLAASMWGTIGIFATYIYRYNVDSFTMVFWRVLFALIILGTYISLFLRENPFT 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ V+ + + + Y + + P SV LG + KE
Sbjct: 62 REK-----LWFYAVYGLVGVFAFYTLYFYTVKISSVGFAVLLIYTAPAFSVILGRLIFKE 116
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + +A ++++ +L++ + + LA+ + G E
Sbjct: 117 PITAEKAVALGMVLVGVLLVAGNVDFNVSHLALLTGIGTGFIYALYGVLAKF-GVRNERP 175
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + F + L + ++++ +K ++S I
Sbjct: 176 ERVLFMTLLFGLLFLAPFSKFSVPRGAIPYLLGLAFFPTFLGYTLYNHALKEVEVSRASI 235
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P++ IV + + + + ++ + +++ A ++
Sbjct: 236 VATVEPVVAIVLAYILFGEALTPLQLLGGALIIGASILV 274
>gi|144897481|emb|CAM74345.1| RarD protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 286
Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 4/286 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P G A++ WG+ +Y L V EV++HR++ + L+ +
Sbjct: 3 PARAGAFAALTAFLCWGVFGIYFHALGAVPAAEVLAHRIIGGALFALLFQSAWGR-LAEI 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L + K + L+ S+ +AV+WG FI+A + S YF+ P+ISV L V L E
Sbjct: 62 RVALTDTKVLRGLLGSSVAIAVNWGVFIWATANGRALEASLGYFIFPLISVVLARVVLGE 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ Q +A L L + + G+P ++L +AV++ AY RKTI VG+ G F+E
Sbjct: 122 RLSRRQGVAVALAALGVGWLVAVGTGLPWVALVLAVSFGAYGLLRKTIVVGAMAGLFVEA 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
VL AL Y++W+G H + G L + +F+YG +R +LST+G
Sbjct: 182 VVLVPLALGYLLWSGGGVVVHDATP--QVIALIAVAGPLTAIPLALFAYGARRLRLSTLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+M Y P + ++ +VF+ + + F + + +Y P+
Sbjct: 240 LMMYINPTVQMLVAVFLFGEAFTQAHMVAFAAIWCGLCLYSWPSRR 285
>gi|313894272|ref|ZP_07827837.1| protein RarD [Veillonella sp. oral taxon 158 str. F0412]
gi|313441096|gb|EFR59523.1| protein RarD [Veillonella sp. oral taxon 158 str. F0412]
Length = 298
Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 2/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G ++WG+ PLY L QVS V+SHR++WS +FF ++ +
Sbjct: 5 SKKGLSTTLLCCLIWGLLPLYWALLNQVSSFSVLSHRIIWSGVWMFFLVIITGRQQLRID 64
Query: 83 DTLKNPKAVGMLVFSATI--LAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++++W +I+A+ + TS Y++ P+++V LG V K
Sbjct: 65 IHYLRTNLTQLGLLLLAAMLISINWFTYIWAVTNQHVLDTSLGYYINPLLNVLLGIVIYK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L Q ++ + +L + IMT G + + + A K
Sbjct: 125 ETLLWSQKLSIAIAVLGVSIMTYELGSLPIVSIVLAVTFSLYGAIKKRLTIHPFSSIAME 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L P + V + F P L L+ GL S +FSYG + L+ +G
Sbjct: 185 AWLITPIALWYVLTVDTTSWSFIENMTPTGLLLVCSGLTTSVPLILFSYGARLLPLNVLG 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++Y +P + ++F + T + I FG + IA+V++ L + I +
Sbjct: 245 FLQYLSPTMGFFLAIFYFGESFGTPQMIAFGCIWIALVLFSLSSQITTR 293
>gi|257460643|ref|ZP_05625744.1| RarD protein [Campylobacter gracilis RM3268]
gi|257441974|gb|EEV17116.1| RarD protein [Campylobacter gracilis RM3268]
Length = 290
Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 146/291 (50%), Gaps = 4/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + F + +WG+ P++ + ++ V +++++HRV+WS + + + L
Sbjct: 1 MEENRTKGLMLAFATFFMWGVFPIFFKLIKDVDAVQILAHRVVWSFLLLLVFLCFTHR-L 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L PK L+ + +++ +WG +IYA+ + Q TS YF+ P+ SV LG++F
Sbjct: 60 KNVARLLSTPKIALTLLCTGLLISTNWGIYIYAVNSDQILATSLGYFINPLFSVLLGALF 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ERL+ ++ LL ++ + G P++SL + ++++ Y RK + V S EG F
Sbjct: 120 LRERLSTAAKLSLLLAFAAIGVQIYALGRLPIISLVLPLSFAFYGLIRKKVKVPSFEGLF 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E ++ +PAL ++++ G F LF G F+ + LS
Sbjct: 180 CETTLMLLPALAFLIYCALKGNGAFGFSASGALLFASGLIT--ILPLLTFAVSTQYLPLS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
T+G M+Y +P + ++ +VFI + ++T + + F ++ + V L +
Sbjct: 238 TIGFMQYISPSMSMLIAVFIYGEELETYKILSFSLIWFGLAVVGLDGLRRK 288
>gi|282849560|ref|ZP_06258944.1| protein RarD [Veillonella parvula ATCC 17745]
gi|282580497|gb|EFB85896.1| protein RarD [Veillonella parvula ATCC 17745]
Length = 298
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 131/293 (44%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI--VYFSG 76
+ G + YI+WG+ PLY L VS +++ R++WS + + ++F
Sbjct: 1 MDHTSKKGLITALSCYIIWGLLPLYWALLNHVSPYNILAQRIIWSGICMAIVVFGLHFKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L+ +A I++V+W +I+A+ Q TS Y++ P+ +V LG
Sbjct: 61 FKKDFQLLKEQRSQLFLLLVAAVIISVNWFTYIWAIANNQVMNTSLGYYINPLFNVVLGV 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ KE L+ + ++ L+ + + ++T G L I A K + S
Sbjct: 121 ILFKEVLSIPKKLSVLIATIGIALLTYQVGSLPLVSMILAVSFGLYGAVKKKLLISPFTS 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L P + +F + T+ LI GL S +FSYG + L
Sbjct: 181 IAFEAWLLTPLALLYTTMVDNTVWSYFGTDWYTTILLIACGLTTSVPLVLFSYGAQLLPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +G ++Y +P + ++ ++F + T + I F + IA+V++ L + I +
Sbjct: 241 NLLGFLQYVSPTIALLLAIFYFGESFGTPQMIAFSCIWIALVLFSLSSQITTR 293
>gi|317153564|ref|YP_004121612.1| hypothetical protein Daes_1854 [Desulfovibrio aespoeensis Aspo-2]
gi|316943815|gb|ADU62866.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
aespoeensis Aspo-2]
Length = 296
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 86/288 (29%), Gaps = 2/288 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G +V A ++WG+ ++ + E VS LE+ R + +
Sbjct: 3 IRGLFYVLAAALMWGVIGIFAKEILAEGVSALEIAFWRATFGWLLFLVHALIMRQTRVTR 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
D + V + L T+ ++ V + +
Sbjct: 63 SDLPALFGFGFICVTLFYGAYQIAIRDVGMALAAVLLYTAPAWVAFLSWLVLKEGMTPVK 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L I + I + + + + + + G +
Sbjct: 123 MVCVLMTIVGVASISLGPKLMSGGTLDINLVGLGAGLLSGFTYALYYIFGKKYLYRYHTP 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + AL + F + + + + F + G++R + + +
Sbjct: 183 TIFVYALPFGAALLFPFVDFQPKSGYAWIMLFLMAAVTAYGAFLAYYAGLRRLEATRASV 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P++ V + F+ + + +++ A+++ ++ S
Sbjct: 243 IATFEPVVAAVFAYFLFGETFSLPGYLGSCLIIGAVILVVVSGSRPSR 290
>gi|260575156|ref|ZP_05843157.1| RarD protein, DMT superfamily transporter [Rhodobacter sp. SW2]
gi|259022778|gb|EEW26073.1| RarD protein, DMT superfamily transporter [Rhodobacter sp. SW2]
Length = 311
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/302 (24%), Positives = 148/302 (49%), Gaps = 10/302 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + A ++WG++PLY + L V LEV+SHR LWSL ++ +
Sbjct: 3 EQRKGVVALAVACVVWGLSPLYYKLLAAVPPLEVLSHRTLWSLALFGLILLGQGRLREVP 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + V + +A +++ +W FI ++ S Y++ P+++V LG + E
Sbjct: 63 QLLRSHGGGVAL---AAVLISANWFLFILSVQIGLTVQASLGYYIFPLVAVLLGVLAFGE 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RLN Q +A L ++L++T G+ P ++LA+A T+ Y +K + G E+
Sbjct: 120 RLNRWQGLAVSLAAAAVLVLTFGLGVAPWVALALATTFGLYGLIKKRLVAGPVVSVTAEV 179
Query: 201 CVLAIPALFYVV------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
VLA A+ ++ ++ FS +F ++ +L L G++ + +F+Y +R
Sbjct: 180 LVLAPLAVVWLAGVHGGLFSEFSRAGGWFGHSLGTSLLLAFSGVMTAGPLILFTYASQRV 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++TVG+++Y P L + + + +P I FG++ A+ +Y ++ +++
Sbjct: 240 TMATVGLVQYLNPTLQFLCATLVFAEPFSRWHGIAFGLIWAALAIYSWQALVQDRAARSR 299
Query: 315 KS 316
S
Sbjct: 300 NS 301
>gi|255322704|ref|ZP_05363848.1| RarD protein [Campylobacter showae RM3277]
gi|255300265|gb|EET79538.1| RarD protein [Campylobacter showae RM3277]
Length = 296
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 70/291 (24%), Positives = 144/291 (49%), Gaps = 4/291 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T +G ++ +++WG+ P+Y + L +S E+++HR++WS + F ++ F L
Sbjct: 4 KNQTKIGFIYGLSVFMIWGVFPIYFKQLSALSATEIVAHRIVWS-VLLLFLLLKFGRKLG 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ L N K L + ++A +W ++YA+ + TS YF+ P+I++ LG + L
Sbjct: 63 AAEKILSNKKTTFWLFVTGVLIAANWWIYVYAVNIGKIVETSLGYFINPLINMLLGVLIL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KE+L+ A ++ +++ + G+P++S+ + +T+ Y RK + V S EG F+
Sbjct: 123 KEKLSRAGKFAIAIVFVAIGVQIYDAGGLPIISIILPITFGFYSLIRKRLSVPSLEGLFV 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E ++A AL + + SG HF + G +F+ R LST
Sbjct: 183 ETALIAPIALVALFFVAASGQNHFSFSWFGL--LIALCGPATVVPLLLFNSAATRLNLST 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+G ++Y +P + ++ +VF + + ++ + F ++ A+ + +
Sbjct: 241 IGYLQYISPSMQLLLAVFYYGEQVSALKALSFLLIWSALAAVSFSAIYSKK 291
>gi|332158251|ref|YP_004423530.1| hypothetical protein PNA2_0610 [Pyrococcus sp. NA2]
gi|331033714|gb|AEC51526.1| hypothetical protein PNA2_0610 [Pyrococcus sp. NA2]
Length = 280
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 109/283 (38%), Gaps = 9/283 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ M G L VF A +WG ++ +FL Q +S +I +RV+++L +F +
Sbjct: 1 MNERAMRGYLLVFLAASMWGTLGIFAKFLYQFNLSTYTIIFYRVIFALIFLFVYLKIKGI 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + ++ LK +V++ + + + + Y + + P S+ LG
Sbjct: 61 PILVPRERLK-----FYVVYAFFSIFLFYSLYFYTVKISSVSFAVLMLYTAPAYSIILGK 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+F E++ ++IA +L++ + ++L+ G + V A V +
Sbjct: 116 LFFNEKITKKKVIAVILVVSGV--LSLNYGGISFTTKAIVVGLASGITYALYGVFAKMAV 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E + + + F + L + +++ +K ++
Sbjct: 174 KREEPERVLFNVLLLGSLFLLPFTDFKVPIESIPYLLALAFFPTFLGYILYNTALKTVEV 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S ++ P++ + + I + + + ++++ ++
Sbjct: 234 SKASVIATIEPVVAMTLAFLIFGEKLTMFQLFGGAMIILGAIL 276
Score = 39.5 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 43/133 (32%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+A + + + + I AL ++ G + +
Sbjct: 13 FLAASMWGTLGIFAKFLYQFNLSTYTIIFYRVIFALIFLFVYLKIKGIPILVPRERLKFY 72
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
++ + ++ Y +K + +S +M YTAP I+ + I + I +
Sbjct: 73 VVYAFFSIFLFYSLYFYTVKISSVSFAVLMLYTAPAYSIILGKLFFNEKITKKKVIAVIL 132
Query: 293 VVIAMVVYLLPTV 305
VV ++ +
Sbjct: 133 VVSGVLSLNYGGI 145
>gi|311897908|dbj|BAJ30316.1| hypothetical protein KSE_45330 [Kitasatospora setae KM-6054]
Length = 310
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 144/283 (50%), Gaps = 2/283 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S +G F AY +WG+ PL+ L+ +++++R++WSL A++ +
Sbjct: 5 SREARVGLWNGFAAYGMWGLFPLFWPLLQPAGAADILANRMVWSLVA-VAALLLARRRWA 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L+ P+ + +L +A ++V+WG +I+ + + TS YF+ P++++ G + L
Sbjct: 64 WIRPLLRQPRRLALLALAAVTVSVNWGVYIWGVNSGHVVETSLGYFINPLVTIAFGVLVL 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ERL Q A + +++++TL G P ++L +A +++ Y +K + +G +E +
Sbjct: 124 RERLRPAQWTAVGVGASAVVVLTLAYGRPPWIALTLAFSFATYGLIKKKVALGGAESLAV 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E V+ AL ++ + G F G + L+ GL+ + F R L+T
Sbjct: 184 ESAVMFPFALAFLGYLAVRGEGSFGTGGWGHSALLVLSGLITAVPLMCFGAAALRVPLTT 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+G+++Y AP+ + V + + + R F +V +A+VV
Sbjct: 244 LGLIQYLAPVSQFLIGVTVFHESMAPARWAGFALVWVALVVLS 286
>gi|164688628|ref|ZP_02212656.1| hypothetical protein CLOBAR_02273 [Clostridium bartlettii DSM
16795]
gi|164603041|gb|EDQ96506.1| hypothetical protein CLOBAR_02273 [Clostridium bartlettii DSM
16795]
Length = 315
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/312 (13%), Positives = 107/312 (34%), Gaps = 11/312 (3%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVIS 57
M KK+ ++N+ T+ GTLF A LWG++ + QFL + ++ V+
Sbjct: 1 MYSSTIKKQNLSNFKQQNSKNNTIKGTLFALIAGTLWGLSGICAQFLFQNKNLTPEWVVC 60
Query: 58 HRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
R L S + ++ Y ++ K +++F + + A+
Sbjct: 61 IR-LISSGLILLSVAYAKEKNNIFKIFKSKRDVKDLVLFGILGMFGVQYTYFVAIKYSNA 119
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLL 170
+ ++ P I + S+ K + +++ A +L IL + ++ H L
Sbjct: 120 ATATVIQYLGPAIILIYQSLKNKSLPSFVELFAVVLSILGVFVLVTHLDINNLVISRQAL 179
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
A+ ++ + K + ++ + +
Sbjct: 180 LWALGAAFALAYYTIKPGNLLNNFSNICVTGWGMLIGGVVFSFIKPIFDISGTFDIYTIA 239
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ ++ F I+ K + + P+ + S+F+L + +
Sbjct: 240 VIIVVIIFGTVIPFSIYVISTKLIGPTKTSLFSTIEPVSSALLSIFLLNLSFGFMDFLGT 299
Query: 291 GIVVIAMVVYLL 302
+++ +++ +
Sbjct: 300 AMIIAMVIILSI 311
>gi|172056825|ref|YP_001813285.1| transporter DMT superfamily protein [Exiguobacterium sibiricum
255-15]
gi|171989346|gb|ACB60268.1| RarD protein, DMT superfamily transporter [Exiguobacterium
sibiricum 255-15]
Length = 291
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F AY++ G+ P+Y F + V V+S R++ + V + +K
Sbjct: 3 KRGMSATFVAYVIGGLLPIYKLFADHVPAWTVVSIRIISAFIFVTLLLRLTGK-FKHVKQ 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ + ++ + +L +W ++YA+ +S Y++ P++SV G +F ERL
Sbjct: 62 LWRSKRQRNTVLTAGLVLGGNWTLYLYAIGEGYLVESSLGYYINPLVSVLFGLLFFGERL 121
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
N Q+ A + +LI+T G P+++ ++A++++ Y +K G F+E
Sbjct: 122 NRAQLFAMASAVTGVLILTFGYGKFPIIAFSLAISFAFYGVLKKKAAAEPLSGLFLETL- 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + V G + ++ G+ + +F YG+ + VGI+
Sbjct: 181 ---VTLPFAVLTLGLTGANPIALPTEALFAIVMLGVATAVQLMLFGYGMPKIPFVYVGIL 237
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+Y AP L ++ VF+ V I F + +A+ ++ + + N
Sbjct: 238 QYIAPTLTLILGVFLFNDVFTPVHFIAFLFIWLAVALFTISGISNGR 284
>gi|241895426|ref|ZP_04782722.1| DMT superfamily drug/metabolite transporter [Weissella
paramesenteroides ATCC 33313]
gi|241871400|gb|EER75151.1| DMT superfamily drug/metabolite transporter [Weissella
paramesenteroides ATCC 33313]
Length = 303
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/298 (19%), Positives = 140/298 (46%), Gaps = 7/298 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G AYI WG+ ++ + + V ++++S+R+LWS+ + + L
Sbjct: 3 NKKLGVQSGLLAYIFWGVLGVFWELMHTVPAMDILSYRILWSMLTIAIILTIRRDWPLLF 62
Query: 82 KDTLKNPKAVGMLV--FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ +++ +W +IY + + S Y++ P+++V + +FL
Sbjct: 63 NTIKQLAHTHKLKWLILASFLISANWFIYIYMVTHQAATEASLGYYIMPLMNVVVAVLFL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E L+ +I+A +++ + I+T +PL +L +A T+ Y +K +P+ + +
Sbjct: 123 HEHLSKTRIVALTFVVIGVAILTFQTGSLPLNTLLMAGTFCLYSLIKKKVPLPALISLTL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + A+ Y+ + GN T+ +I GL+ +F+ K T
Sbjct: 183 ETLFVFPIAIIYL----LLTPYNMLQGNPHVTVLIILSGLVTIIPLLLFAVAAKNIDFIT 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ ++Y P + ++ ++F+L + + IVF ++ I + V++ ++ ++ + + ++
Sbjct: 239 LSFIQYLNPTMQLLMAIFVLNEAFTWHKAIVFILIWIGIAVFVYGSIQSARQTRQIQN 296
>gi|306836457|ref|ZP_07469432.1| DMT superfamily drug/metabolite transporter RarD [Corynebacterium
accolens ATCC 49726]
gi|304567676|gb|EFM43266.1| DMT superfamily drug/metabolite transporter RarD [Corynebacterium
accolens ATCC 49726]
Length = 291
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 147/291 (50%), Gaps = 4/291 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ AYI+WG P + L + LE+++HRVLW+ V +V+ G L++ +
Sbjct: 1 MIYTLAAYIMWGFFPAFFPLLLPATPLEILAHRVLWTAVIVTAFLVFSGGWRELIRMDKR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + V+WG ++ A+ T + YF+ P++SV LG +FLKE+L
Sbjct: 61 TWGWLAA---GGVFITVNWGTYVLAINTDHVADAALGYFINPLVSVALGMIFLKEQLRPW 117
Query: 147 QIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q A + ++L +T +G P +SL +A ++ Y +K + V ++ E V++
Sbjct: 118 QATAVAVAAFAVLYLTFFTGQAPYISLLLAASFGIYGLIKKQVRVSAAVSVAAESLVVSP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ Y+VW +G F P L LI GL+ + F+ G + +LST+G+++Y
Sbjct: 178 VAIAYIVWIEQAGHGTFTSEGTPHMLLLISAGLITALPLLCFAQGARSLRLSTIGMLQYL 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P++ ++ ++F+ ++ R I FGI+ +A+ +Y+ + K +
Sbjct: 238 TPIMQMLWALFVTQEHFSAHRWIGFGIIGVAVSIYITDLIRVRQSAPRKSA 288
>gi|19553330|ref|NP_601332.1| permease [Corynebacterium glutamicum ATCC 13032]
gi|62390967|ref|YP_226369.1| permease [Corynebacterium glutamicum ATCC 13032]
gi|21324901|dbj|BAB99524.1| Predicted permeases [Corynebacterium glutamicum ATCC 13032]
gi|41326306|emb|CAF20468.1| Predicted permease [Corynebacterium glutamicum ATCC 13032]
Length = 280
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 72/283 (25%), Positives = 139/283 (49%), Gaps = 4/283 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F AY+ WG+ P + L E+++HR+LW+ + I + SG L
Sbjct: 1 MIFGVLAYLGWGMFPAFFPLLLPAGPFEILAHRILWTAVLMMIIISFTSGWKELKSADRG 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + S+ +A +W ++ A+ + Q + YF+ P++SV LG VF KE+L L
Sbjct: 61 TWLRIIL---SSLFIAGNWLIYVIAVNSGQVTEAALGYFINPLLSVVLGIVFFKEQLRKL 117
Query: 147 QIIAALLIILSLLIMTLHSGIPLL-SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
QI A ++ +L++T P ++ +A T+ Y +K + + ++ E VL
Sbjct: 118 QISAVVIAAAGVLVLTFLGDKPPYLAITLAFTFGIYGALKKQVKMSAASSLCAETLVLLP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ Y++ SG FF LI GL+ + +F+ K LSTVG+++Y
Sbjct: 178 IAVIYLIGLEASGHSTFFNNGSGHMALLICSGLVTAVPLLMFALAAKAIPLSTVGMLQYL 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P + ++ ++F++ + ++ +R F + IA+ +Y+ +++
Sbjct: 238 TPTMQMLWALFVVNESVEPMRWFGFVFIWIAVTIYITDSLLKK 280
>gi|239627434|ref|ZP_04670465.1| transporter [Clostridiales bacterium 1_7_47_FAA]
gi|239517580|gb|EEQ57446.1| transporter [Clostridiales bacterium 1_7_47FAA]
Length = 292
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 98/297 (32%), Gaps = 12/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +G L+V +WG + +++ L + L V+ R L + + + +
Sbjct: 1 MKNRIGYLYVIITCFIWGSVYIASKYALASMGPLTVLCFRYLVAGACLTVLL-----HMR 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T++ + + V F + L S + P+ L +VFL
Sbjct: 56 KTRRTVQKGDWKYIWIVGGLGYFVSITFQLIGTKLLDASLASLINGMNPITISLLAAVFL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE++ I + + I + I+ G + + +A + + +
Sbjct: 116 KEKIRKRHIASICISIAGVYIILGVGGASVNAAGLAASVCSVLLWSTASVAIRKVSGGYD 175
Query: 200 MCVLAIPALFYVVWNGFSGGE------HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+A+ L + L + + + +++ G+K
Sbjct: 176 PVQIALYGLGAALIFTVPCAMVEAVKTPPVLTGSAVLACIYLGVVGTAVAHTLWNMGLKL 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + PL V V +L + + + ++ + ++V ++ + +
Sbjct: 236 LDASVCSMFYPLQPLTSAVLGVVLLGEVLTWNFVVGGVLICMGIIVSVMEKDMFLHR 292
>gi|261493891|ref|ZP_05990403.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495157|ref|ZP_05991621.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261309227|gb|EEY10466.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310493|gb|EEY11684.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 296
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 72/292 (24%), Positives = 143/292 (48%), Gaps = 4/292 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + Y+ WG P+Y + + ++++ RVLW+ F ++ F G ++
Sbjct: 6 KLQGWHYALLCYLTWGTFPIYWYPINQSGMPAEQILAQRVLWAALFAVFLLLIFQQGRAV 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K PK +G+ V S+ ++ V+W +++A++ S YF+ P+ +VF+G + LK
Sbjct: 66 INAF-KQPKVLGLFVLSSFMIGVNWLVYLWAIVNEHILDASLGYFINPIFNVFVGRLILK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+LN Q++A L I +L + + +G P ++L +A ++ Y RK P+ G +E
Sbjct: 125 EQLNKAQLLALLFAISGILWLAIPAGQIPWVALILAASFCIYGLIRKLAPMEPLSGLALE 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+++ A+ Y+ + F N L+ G+ + F+ G +R +S +
Sbjct: 185 TLLMSPFAITYLCFCYHQNILVFSELNPLQMAVLLCSGIATTLPLLWFAMGARRISMSLL 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G+++Y +P L + V I + + R + + +V I + V+LL K
Sbjct: 245 GMLQYISPTLQFLCGVLIFNETLSAERAVGYILVWIGVGVFLLGMKKAGVKR 296
>gi|315641601|ref|ZP_07896669.1| DMT superfamily drug/metabolite transporter RarD [Enterococcus
italicus DSM 15952]
gi|315482642|gb|EFU73170.1| DMT superfamily drug/metabolite transporter RarD [Enterococcus
italicus DSM 15952]
Length = 297
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/293 (19%), Positives = 134/293 (45%), Gaps = 6/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + +YILWG+ LY L++V L+++ +R ++SL + + + S
Sbjct: 2 QNRTKGIVTGVSSYILWGVLGLYWSLLKEVPALDILGYRFIFSLVFMAVILSFQKQWTSF 61
Query: 81 LKDTLKNPKAVGMLVF--SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ ++ S+ +A++WG +IY + Q S Y++ P+++V + F
Sbjct: 62 FASVKTLWQSGKIIWVILSSLFIALNWGTYIYMVGHGQATEASLGYYIMPLLNVVVAVFF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+E L ++A L + ++++T+ IP ++ +A + Y +K I + +S
Sbjct: 122 FREPLTKTSVLAVLFATIGVVLLTIQTGSIPFNTMIVAFAFCFYGVLKKQIALPASFSLT 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E V A+ Y ++ + + L+ G++ + +F+ K
Sbjct: 182 LETIVCFPLAVGYFFFSKTPSLFSY---DGLTISLLVLSGVITAVPLLLFTVAAKSLDFL 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T+ ++Y P + ++ +VF ++ D + IVF + I + ++ + ++ + +
Sbjct: 239 TLSFIQYINPTIQLLIAVFFFREAFDPHKLIVFVFIWIGIAIFTIGSIHSYRQ 291
>gi|119776167|ref|YP_928907.1| membrane protein [Shewanella amazonensis SB2B]
gi|119768667|gb|ABM01238.1| membrane protein [Shewanella amazonensis SB2B]
Length = 293
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 108/296 (36%), Gaps = 9/296 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L + A +L+G T L+++ + + L++ +R + + + L L
Sbjct: 2 SKASSGLLELHSAVLLFGGTALFSKLI-PLGALDITVYRCAIAALVLALIVKATRHSLRL 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
N + G+ + I+++HW + ++ + ++F PV++V + +
Sbjct: 61 -----GNKRDYGIALALGVIVSLHWVTYFASMQMSSVAIGMIAFFTYPVMTVLVEPLING 115
Query: 141 ERLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
R + ++ + ++ + ++ L + + V +A AR + +
Sbjct: 116 TRPHLRDLVCGVAVLTGVALLIPEASLGNDITLGILVGVLSAALFTARNLLHKRYFAQYT 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + F + + L ++ + + +F+ ++
Sbjct: 176 GPQAMFYQTLVAVLFLGSFVESTPPEVTSDVWQLLILLGVIFTATPHALFTSALRHLSAK 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
TVG++ P V ++ +L + ++ + +VV V + + K
Sbjct: 236 TVGLVSCLQPFYGTVLALLLLGETVNLSTLLGGLLVVSTAVYETAQSHRQQRQKKA 291
>gi|148218|gb|AAA67615.1| f300 [Escherichia coli str. K-12 substr. MG1655]
Length = 300
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
G + Y + + V E+++HRV+WS + + S LK ++ P+ + ML S
Sbjct: 25 GYSATYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIFMLAVS 83
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
A ++ +W FI+A+ S YF+ P++++ LG +FL + +Q +A +L I
Sbjct: 84 AVLIGGNWLLFIWAVNNHHMLERSLGYFINPLVNIVLGMIFLGDGFRRMQWLAVILAICG 143
Query: 158 LLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF 216
+L+ G P+++L +A +++ Y RK I V + G IE L A Y+
Sbjct: 144 VLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIAD 203
Query: 217 SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVF 276
S H + L LI G++ + F+ R +LST+G +Y P LM + +V
Sbjct: 204 SSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVT 263
Query: 277 ILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + + F + +A+ ++++ + +
Sbjct: 264 FYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK 300
>gi|197303996|ref|ZP_03169028.1| hypothetical protein RUMLAC_02733 [Ruminococcus lactaris ATCC
29176]
gi|197296964|gb|EDY31532.1| hypothetical protein RUMLAC_02733 [Ruminococcus lactaris ATCC
29176]
Length = 312
Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/295 (8%), Positives = 76/295 (25%), Gaps = 16/295 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK---- 82
+ + ++WG + +E + + R + + + + K
Sbjct: 9 MLLILTALIWGSAFVAQSIGMEYIGPFTFGAARSILGGVTLLPVVFFRKKKSQANKGKAE 68
Query: 83 ------DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + L + L F + +I LG
Sbjct: 69 PDEKKEKNEQRKTLLAGGICCGICLTIGSMAQQIGLQYTTAGKGGFITALYILIVPLLG- 127
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL----LSLAIAVTWSAYCFARKTIPVGS 192
+ + +L ++ + + + G + + A
Sbjct: 128 LAFGRKAGKKVWCGVILAVVGMYFLCVKDGFSISKGDWIILAGSFAFAGHILVIDYFSPK 187
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+G + I + + S + + L + + + K
Sbjct: 188 VDGVCLSCLQFFICGMICAIPMLVSEQPTVNAVLVSWRPIVYAGVLSSGVGYTLQIIAQK 247
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ + +++ IL + + + +V A+++ LP
Sbjct: 248 NTDPTVASLLMSLESVFAVLAGWVILGERLSVREFVGCVLVFSAVIIAQLPERKA 302
>gi|257092163|ref|YP_003165804.1| RarD protein, DMT superfamily transporter [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044687|gb|ACV33875.1| RarD protein, DMT superfamily transporter [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 295
Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 77/294 (26%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G F AY +WG PL+ + L VS ++V+S+R +W+ ++
Sbjct: 3 ATRQLAGIGFGLTAYAMWGFFPLFFRQLAHVSPMDVLSNRAVWACLL-VGLLLTLRRQWG 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + ML +A ++ +W F++A+ +Q +S YF+TP+++V LG V L
Sbjct: 62 KVAAVFGQSRQLLMLTIAAFLIGSNWLVFLWAVANQQVVASSLGYFLTPLVNVLLGLVVL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KERLN L+ ++ L + ++ + G P +SL +AVT+ Y RK +PV + G ++
Sbjct: 122 KERLNRLEWVSVALALAAMTNEIVSLGSLPWVSLVLAVTFGTYGLVRKQLPVDAVSGLWL 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + Y W +G F ++ T LI G L + F+ +R L++
Sbjct: 182 ETLAMLPVCGLYAFWQAQAGHPVFTGHDLRTTGLLISAGALTALPLMAFAAATQRLDLAS 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
VG++ Y P L V++V++ +P+ + R + FG++ + ++V+ + +
Sbjct: 242 VGMLMYINPTLQFVTAVWLFGEPMQSARLLSFGLIWLGLLVFSWSAWGKYRQPR 295
>gi|212224922|ref|YP_002308158.1| permease [Thermococcus onnurineus NA1]
gi|212009879|gb|ACJ17261.1| permease [Thermococcus onnurineus NA1]
Length = 289
Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G LFVF A +WG ++ ++L+ +S ++ +RVL++L + + +
Sbjct: 2 KKGYLFVFLAASMWGTLGIFAKYLDGFGLSPFTMVFYRVLFALILLAVYLSFRGSFSIER 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + + Y + + P+ S+ LGS+ +E
Sbjct: 62 SR------LKFYASYGFFSIFLFYTLYFYTVTISSVSFAVLLLYTAPIYSIILGSLIFRE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L ++IA +++ + + ++ G S + F V + E
Sbjct: 116 PLKREKVIALTMVMTGV--LLVNWGDVRFSTKALIFGLLTGFTYALYGVLAKLAVRKEEP 173
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A+ F + + +++ +K ++S I
Sbjct: 174 EKALFYTLLFGMIYLLPFADFGVPAGAVPYLFALAFFPTFLGYILYNRALKEIEVSRASI 233
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P++ I+ + + ++ + + +++ ++
Sbjct: 234 VATIEPVVAIILAFLLFEETLTIKQLAGAALIIGGSMLI 272
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 41/113 (36%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M + ++ S F + + + ++ Y + + +S
Sbjct: 33 FTMVFYRVLFALILLAVYLSFRGSFSIERSRLKFYASYGFFSIFLFYTLYFYTVTISSVS 92
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ YTAP+ I+ I ++P+ + I +V+ +++ V S K
Sbjct: 93 FAVLLLYTAPIYSIILGSLIFREPLKREKVIALTMVMTGVLLVNWGDVRFSTK 145
>gi|227824013|ref|YP_002827986.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227343015|gb|ACP27233.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 387
Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 81/287 (28%), Gaps = 5/287 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +F A +++ I ++ L + V R W+ G + + S
Sbjct: 99 GYVFALLAIVIFSIQDGLSKHLGANYPPVFVAMIRY-WAFAGFAITLAWRSPAGLSATAV 157
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K P + +L I A + TP+ L L ER+
Sbjct: 158 TKRPLLQVLR---GVLLPAQIVVVITAFTVVGLAHSQAILAATPIFVALLSMPLLGERVG 214
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A ++ +L++ + A FA I M
Sbjct: 215 WRRWSAITAGLVGVLLILKPGEGTFEIDFLLPLTGALMFAVYAIATRLVSREDSAMTSFF 274
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ G + + PD ++++ + S V + Y
Sbjct: 275 YTGVVGAAAISLVGPFFWVTLSGPDWVWMLLLCVTGSLSHYFLIRAYDLLDAVAVQPLTY 334
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + V I + + + +VV A + + + + +
Sbjct: 335 LQLVFASIMGVTIFGETLTANMIMGSLLVVAAGIFTVWRERVVARRK 381
>gi|145297625|ref|YP_001140466.1| RarD protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142850397|gb|ABO88718.1| RarD protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 298
Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ MGT ++ LWG+ PLY QF+ +V++ E++SHRVLWS+ + F +
Sbjct: 1 MKNWMGTGSAALSFALWGMLPLYYQFMPEVNMWELLSHRVLWSVVLLAALFALFGYQVPW 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + +++ + ++++ W F + L T Q TS ++F+TP+ ++ +FLK
Sbjct: 61 ARLRSEPRQLG-LILLAGPVMSISWCMFTWCLTTGQVLATSLAFFMTPLFNIVFAVIFLK 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+L + +A L L+ ++++ +P SL + ++ Y +K + + ++E
Sbjct: 120 EKLTVQKHLAVALAGLAYMLLSY-GQLPWFSLIMGANFTFYGLLKKKVHYDAGVSLYLEA 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V AL + +G F G+ D L L+G +F YG+ R ++STVG
Sbjct: 179 LVQLPVALLIIGALTLNGMSQFMAGDWADRLLLMGSAPATLLPVGLFCYGMMRTRMSTVG 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+++Y P L + ++ + D V+++ F V ++V LLP
Sbjct: 239 LLQYIEPSLAFLLAILWFGETADPVKSVGFAFVWAGLLVSLLPLHRLRR 287
>gi|58580066|ref|YP_199082.1| hypothetical protein XOO0443 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622064|ref|YP_449436.1| hypothetical protein XOO_0407 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188578958|ref|YP_001915887.1| RarD protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58424660|gb|AAW73697.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366004|dbj|BAE67162.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188523410|gb|ACD61355.1| RarD protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 302
Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 85/294 (28%), Positives = 149/294 (50%), Gaps = 3/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L ++LWG+ PLY L+ V L++I+HR++WS V ++ G L
Sbjct: 5 SPQEARRGLLITASTFVLWGLVPLYWHLLKAVPSLQIIAHRIVWSTVLVVVWLLASLG-L 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+ ML S+ +A +WG +I+A+ S YF+ P++SV LG +
Sbjct: 64 RWWRSIAAQPRALWMLAGSSVAIAFNWGLYIWAINAGHVIEASLGYFINPLLSVLLGVLV 123
Query: 139 LKERLNHLQIIAALLIILS-LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL +Q +A + + L + + P ++L +AV++ Y RK + V G
Sbjct: 124 LKERLRRIQWVAVVCAAVGVLWLTIVAGAPPWIALGLAVSFGIYGLLRKLVAVDPVAGLG 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PAL W G F G T ++ G++ + F+YG++R L
Sbjct: 184 VESVYLFVPALLLAAWGEQGHGGAFLSGWSLRTDAMLIFGGVVTALPLIGFAYGVRRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S VGI++Y AP L ++ V+ +P D R + F + + +++++ +V+ S +
Sbjct: 244 SLVGILQYIAPSLQLLLGVWFFHEPFDQGRAMGFAAIWVGLLLFVGDSVLRSRQ 297
>gi|166713890|ref|ZP_02245097.1| hypothetical protein Xoryp_21225 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 302
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 85/294 (28%), Positives = 150/294 (51%), Gaps = 3/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L ++LWG+ P+Y L+ V L++I+HR++WS V ++ SG L
Sbjct: 5 SPQQARRGLLITASTFVLWGLVPVYWHLLKAVPSLQIIAHRIVWSTVLVVVWLLASSG-L 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P+A+ ML S+ +A +WG +I+A+ S YF+ P++SV LG +
Sbjct: 64 RWWRSIAAQPRALWMLAGSSVAIAFNWGLYIWAINAGHVIEASLGYFINPLLSVLLGVLV 123
Query: 139 LKERLNHLQIIAALLIILS-LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKERL +Q +A + + L + + P ++L +AV++ Y RK + V G
Sbjct: 124 LKERLRRVQWVAVVCAAVGVLWLTIVAGAPPWIALGLAVSFGIYGLLRKLVAVDPVAGLG 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKL 256
+E L +PAL W G F G T ++ G++ + F+YG++R L
Sbjct: 184 VESVYLFVPALLLAAWGEQGHGGAFLSGWSLRTDAMLIFGGVVTALPLIGFAYGVRRIPL 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S VGI++Y AP L ++ V+ +P D R + F + + +++++ +V+ S +
Sbjct: 244 SLVGILQYIAPSLQLLLGVWFFHEPFDQGRAMGFAAIWVGLLLFVGDSVLRSRQ 297
>gi|213609212|ref|ZP_03369038.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 275
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 2/275 (0%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
GI P Y + + V E+++HRV+WS + A++ S +K LK PK + +L S
Sbjct: 2 GIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWRQVKRLLKTPKKIFLLALS 60
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
A ++ +W FI+A+ S YF+ P++++ LG +FL ER +Q +A +L +
Sbjct: 61 AVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFLGERFRRMQWLAVILAVCG 120
Query: 158 LLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF 216
+L+ G P+++L +A +++ Y RK I V + G +E L A Y+
Sbjct: 121 VLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLVETLWLLPVAAIYLFSIAD 180
Query: 217 SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVF 276
S H + L L+ G++ + F+ R +LST+G +Y P LM + +V
Sbjct: 181 SATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLSTLGFFQYIGPTLMFLLAVT 240
Query: 277 ILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + + F + +A+ ++++ + K
Sbjct: 241 FYGEVPGADKMVTFAFIWVALAIFVMDAIYTQRKK 275
>gi|238018318|ref|ZP_04598744.1| hypothetical protein VEIDISOL_00142 [Veillonella dispar ATCC 17748]
gi|237864789|gb|EEP66079.1| hypothetical protein VEIDISOL_00142 [Veillonella dispar ATCC 17748]
Length = 296
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 65/295 (22%), Positives = 131/295 (44%), Gaps = 2/295 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI--VYFSG 76
+ G + YI+WG+ PLY L VS +++ R++WS + + ++F
Sbjct: 1 MEHTSKKGLITALSCYIIWGLLPLYWALLNHVSPYNILAQRIIWSGICMAIVVFGLHFKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L+ ++ I++V+W +I+A+ Q TS Y++ P+ +V LG
Sbjct: 61 FKKDFQLLKEQRSQLLLLLMASVIISVNWFTYIWAIANNQVMDTSLGYYINPLFNVVLGV 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ KE L+ + ++ L+ + + ++T G L I K + S
Sbjct: 121 ILFKEVLSVPKKLSVLIATIGIALLTYQVGSLPLVSMILAVSFGLYGVVKKKLLISPFTS 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L P + +F + ++ LI GL S +FSYG + L
Sbjct: 181 IAFEAWLLTPLALLYTTMIDNTVWSYFSTDWYTSMLLIACGLTTSVPLVLFSYGAQLLPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +G ++Y +P + ++ ++F + T + I FG + IA+V++ L I + +
Sbjct: 241 NLLGFLQYVSPTIALLLAIFYFGESFGTPQMIAFGCIWIALVLFSLSNQITTIRK 295
>gi|308067811|ref|YP_003869416.1| multidrug ABC transporter permease [Paenibacillus polymyxa E681]
gi|305857090|gb|ADM68878.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Paenibacillus polymyxa E681]
Length = 300
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/279 (10%), Positives = 87/279 (31%), Gaps = 14/279 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
A ++W + + T+ L + R + + + ++ + + K
Sbjct: 19 TILALLIWSTSFIATKAAYTTFPPLTLGLSRFIIASVVLGIVLLIKKEHVKV-----KPK 73
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + +++ + + P I+ L + K +L+ +I
Sbjct: 74 DLATISFSGVLGITLYFSMENIGVSLTTASNAALIVASYPAITSLLELILYKVKLSKYKI 133
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIPVGSSEGFFIEM 200
L ++ + +T + A+ V +
Sbjct: 134 CGIALAMIGVYFLTSVGESSDSKNQLIGNLILIGTGFAWAFYTFMTRKVVDKYPPVTLSF 193
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++F++ L + + F +++YG+ + S+
Sbjct: 194 YQTVAGSIFFIPLALLEKDRWQVPTAGSFMLLVYLGVFCSVIAFLLYNYGLIKLSPSSSV 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ ++ SV +L++ I + I +V+I +++
Sbjct: 254 SLMNLVPIFGVLFSVLLLQETITWRQIIGGLVVIIGVLL 292
>gi|205374505|ref|ZP_03227301.1| rarD protein [Bacillus coahuilensis m4-4]
Length = 310
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 146/296 (49%), Gaps = 5/296 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++ AY+LWGI PLY + LE + E++++R+ WS + ++ + +
Sbjct: 14 GLIYTASAYLLWGILPLYWKLLEHIPADEILANRIFWSFWFMLAYLLVTKRFVKYKQAQQ 73
Query: 86 K---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
K N + L+ ++ +++ +W +IYA+ T Q S Y++ P++S+FLG V LKE+
Sbjct: 74 KMFQNKRQFFALLTASLLISANWFIYIYAVNTEQMVQASLGYYINPLVSIFLGIVVLKEK 133
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L + I + LL ++I+T+ G P ++L +AV++ Y A+K I V ++ G +E
Sbjct: 134 LKKIHIASLLLACTGVIILTISYGQIPWIALGLAVSFGLYGLAKKLIKVEAAVGLTLETL 193
Query: 202 VLAIP-ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ L++V SG G+ LIG G + + +F G + L VG
Sbjct: 194 TISPLAFLYFVYLWYSSGAIELIHGSFFSIGLLIGAGAVTAVPLLLFGKGAQAIPLFLVG 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++Y AP + ++ + + + + + F + A+V+ + + K S
Sbjct: 254 FLQYIAPTITLLLGILLYNESFGQIDLLAFCFIWAALVMVSVNGLRVHATRHRKIS 309
>gi|90420886|ref|ZP_01228791.1| putative chloramphenicol-sensitive protein RARD [Aurantimonas
manganoxydans SI85-9A1]
gi|90334861|gb|EAS48633.1| putative chloramphenicol-sensitive protein RARD [Aurantimonas
manganoxydans SI85-9A1]
Length = 304
Score = 90.4 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 84/285 (29%), Positives = 163/285 (57%), Gaps = 6/285 (2%)
Query: 25 MGTLFVFCAYILWGI-TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + F AY +WG+ P+Y + L VS LE+++HRV+W++P ++++ G L +
Sbjct: 9 KGFFYAFGAYAIWGLVLPIYMKLLSHVSPLEIVAHRVIWAIPF-AVLVLWWQGLLGGVWR 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + +A++++ +WG ++YA+ + + Y++ P+++V LG+V L ER
Sbjct: 68 YFTQWRTLALAAVTASLISFNWGTYVYAIASGHALDAALGYYINPLVNVLLGAVILGERP 127
Query: 144 NHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
N LQ A L ++++I+T+ G+P +SL +A ++ Y RK +PVGS+EGFF+E+ +
Sbjct: 128 NRLQAAAIALAGIAVVILTIKAGGLPWISLVLAFSFGTYGLLRKMVPVGSTEGFFLEVAL 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
LA+P++ + F G++ + LI G L + +F+ G + ST+GI+
Sbjct: 188 LAVPSVLLL---AFLPGDNHVMTGGYVAGMLIFAGPLTAIPLMLFAAGARLLHYSTIGIL 244
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y P L+ +++VF+ +P + + F ++ A+V+Y + N
Sbjct: 245 QYMVPTLLFLTAVFVFGEPFTNWQLVAFCLIWSAVVLYTVALFRN 289
>gi|302379647|ref|ZP_07268132.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3]
gi|302312554|gb|EFK94550.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3]
Length = 302
Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 91/291 (31%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + L+ + ++ R L + F ++ + +
Sbjct: 2 NNRTKGIIAILLSAFGFALMNLFIPLAGDLPTIQKSFFRNLIAFLVAFAILLKSNKKEEV 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ A++ YAL S + P ++ L VFLK
Sbjct: 62 KELHDVKSIPWKTLILRASLGTAGIFCNYYALDHLFISDASVLNKLAPFATLILSWVFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E L II+ L+ + +L + +L I + T +
Sbjct: 122 EDLRKEHIISILIAFVGVLFVVKPTLQIHEILPYLIGILGGVCAGGAYTCVRKLNTLGVN 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++A + F + +F L LIG GL + K A S
Sbjct: 182 SSFIVAFFSGFSCIVCIPFMIFNFVPMGTSSILALIGVGLAALIGQFGITLAYKFAPASE 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +Y+ + + L Q D + I + ++ ++ +
Sbjct: 242 ISVFDYSTIIFTGLFGFLFLHQIPDYLSIIGYALIFSGALINFMNNRRKQR 292
>gi|192290827|ref|YP_001991432.1| hypothetical protein Rpal_2443 [Rhodopseudomonas palustris TIE-1]
gi|192284576|gb|ACF00957.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris TIE-1]
Length = 314
Score = 90.4 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 10/312 (3%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHR 59
M + + + L+ +A P + G + + + + ++L + +E+ R
Sbjct: 1 MTVTSPSNDAVRRLTHRHADHP-LRGIALIVGSTVFLACSDTLAKYLGRTLPPIEIGWIR 59
Query: 60 VLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFL 119
L L + + ++ + + A L FI +L
Sbjct: 60 FLVFLLIMIPVALASK-------ESPLRSVRPKLQLLRALALVSSSVLFITSLQFLPIAE 112
Query: 120 TSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS 179
S + FV P+ L L E + + IA L+ ++ +LI+ + S
Sbjct: 113 ASATSFVAPLFVTALSIPLLGEHVGIRRWIATLVGLVGVLIVIRPGSAAFDPAVLLPILS 172
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
A+ +A G + ++ AL + + + D + GL
Sbjct: 173 AFVWALTLTLTRMISGADRAVVTMSFSALVGFITLSALVPFVWVTPSWQDIGIGLLVGLA 232
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + + A S + Y+ + + + + D +++ +
Sbjct: 233 STMGQWVVVLAYRYADASVLAPFTYSQLVWVAFLGFGVFGEVPDVWTFAGAAVII-GSGI 291
Query: 300 YLLPTVINSGKN 311
Y K
Sbjct: 292 YTAQRERLRRKQ 303
>gi|332978763|gb|EGK15454.1| DMT superfamily drug/metabolite transporter [Psychrobacter sp.
1501(2011)]
Length = 317
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 72/312 (23%), Positives = 145/312 (46%), Gaps = 3/312 (0%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL 64
AT K T G + A+++WG P Y + L Q + +E+I HR++W+
Sbjct: 4 ATPNNAVPAKPKTTVVHTTSKGIITALIAFVIWGSFPFYFKQLAQYNAVEIIGHRIVWTF 63
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
+ +V + + +P+ +G+ S+ I+A +W +++A+ Q S Y
Sbjct: 64 VCLSLVLVLTNR-WQWIDTLKASPRLIGITFLSSLIIATNWLTYVWAVNADQILEASLGY 122
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCF 183
F++P+I + L +FL+ERL LQ +A I S+LI + G P +SL +A+++S Y
Sbjct: 123 FISPLIGILLSLMFLQERLRPLQWLAVAFAIASVLIQVVMLGNLPWVSLVLALSFSVYGV 182
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
++ P+ + + F+E +L + + + + + F + + G +
Sbjct: 183 MQRRTPLQALDSLFLETALLVPICIVWFMSSDVASSSLSFWWSKDIWFL-MLAGPITLIP 241
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+++ K S + M Y P ++ + +VF +P D+ R ++FG++ + ++ +
Sbjct: 242 LLLYNKSTKMVAFSILSFMNYLTPTIIFLLAVFYYHEPFDSQRLMIFGLIWFGLFLFSID 301
Query: 304 TVINSGKNKTKK 315
N KK
Sbjct: 302 LWQNRPSKLLKK 313
>gi|256827898|ref|YP_003156626.1| DMT superfamily transporter protein RarD [Desulfomicrobium
baculatum DSM 4028]
gi|256577074|gb|ACU88210.1| RarD protein, DMT superfamily transporter [Desulfomicrobium
baculatum DSM 4028]
Length = 292
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 78/286 (27%), Positives = 144/286 (50%), Gaps = 3/286 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + AY+ WG+ P+Y + L V +++SHR+ WS + ++ L
Sbjct: 4 GIVAAIGAYVSWGMLPIYWKLLGHVPTAQLLSHRITWSFVVLAVFLILTRRVAKLRSS-- 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+P G + ++ ++ V+W +++++ S YF+ P++SV LG F++ERL
Sbjct: 62 LSPAVWGSYILASLLIGVNWFIYVWSVNAGYIVEASLGYFINPLLSVLLGVFFMRERLRP 121
Query: 146 LQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ L ++ +T G P ++L++A T+S Y +K P+G+ EG +E +L
Sbjct: 122 LQWAPLGLAAAGVIYLTFDYGRLPWIALSLATTFSLYGLVKKKAPLGAFEGLTLETGLLL 181
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
PAL ++ W+ +G F L L+G G++ +F +F+ R LS +GI++Y
Sbjct: 182 APALVWLGWSEAAGTSAFLHAGAGSDLLLVGAGVVTTFPLVMFAAAAHRIPLSMIGILQY 241
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
AP + + VF+ +P + FG+V IA++++ + K
Sbjct: 242 IAPTIQFLIGVFMYHEPFSRTQFTGFGMVWIAVLLFWIERWSFGRK 287
>gi|304320250|ref|YP_003853893.1| rarD protein [Parvularcula bermudensis HTCC2503]
gi|303299152|gb|ADM08751.1| rarD protein [Parvularcula bermudensis HTCC2503]
Length = 313
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 6/298 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L AY LWG P Y L +S +E+ + R+L+++P I+
Sbjct: 2 SGPSSLRTGLLAGTLAYTLWGFLPFYFIVLRGISPIEIFTDRILFAVPFGLLVILA-RSQ 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ L++PK V L+ SA +A +W +I A+ + F S Y++ P++ V +G V
Sbjct: 61 WGEVVKGLRSPKVVLWLLASALAIAGNWILYIVAVQEGRVFEVSLGYYINPLVYVLVGVV 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ ERL LQI+A LL + + I+T++ G PL L +AVT++ Y ++RK + +G+ G
Sbjct: 121 VMGERLRRLQILAVLLAGIGVTILTVYGGRFPLFGLILAVTFTFYGYSRKRVAIGAMPGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFL---GNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
FIE +L+ AL ++W S G+ L+ G + F+ +R
Sbjct: 181 FIETLLLSPLALGLLIWLVASTDTGLEAGLSGDFGLLTLLMLAGPITVTPLLFFAIAARR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
LST+G +++ P L + +P I F + + + +++ + + +
Sbjct: 241 LTLSTIGFLQFIGPTLAFGIG-LLDGEPFTPAYQICFAFIWLGVALFIGDALQHRAQR 297
>gi|89101143|ref|ZP_01173977.1| transporter, EamA family protein [Bacillus sp. NRRL B-14911]
gi|89084144|gb|EAR63311.1| transporter, EamA family protein [Bacillus sp. NRRL B-14911]
Length = 333
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 100/297 (33%), Gaps = 15/297 (5%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ +LWG + + +E S + + + R + ++ + ++ K
Sbjct: 33 LMLLTSLLWGGNFVVGKSLVEHASPVALTAFRWIIAVIFLLPIVL-----RKEKKLLPPA 87
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
V +++ T + + F +AL + + ++FLK+R+N Q
Sbjct: 88 KSLVPLILMGITGVVLFNIFQFWALEETTATNVGLISTLNAISIAVFSAIFLKDRINLPQ 147
Query: 148 IIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
I+ + + +L++ + + +A ++ G +
Sbjct: 148 ILTMMFSLFGVLLVLTKGHLEMLLSLTFNKGDLWMLAAVCIWGIYSILGKWAGKYTSPIL 207
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
I L ++ +S + L + +++ G+++ T
Sbjct: 208 STFYSGIFGLAILLPFSYSDLQIKNPDLSFAGSMLYTGLISTVVCMVLWNKGVQKIGAVT 267
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
G+ P+ + + +L + ++ ++ + IV++ ++ K+ K
Sbjct: 268 AGVFLNFNPVFTAILAFLLLGEKLEAIQFLGGMIVILGCYLFTRLQAQRQRKSLRGK 324
>gi|315302107|ref|ZP_07873065.1| protein RarD [Listeria ivanovii FSL F6-596]
gi|313629527|gb|EFR97702.1| protein RarD [Listeria ivanovii FSL F6-596]
Length = 296
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 76/290 (26%), Positives = 148/290 (51%), Gaps = 7/290 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLLKDT 84
+ AY+ WG+ P+Y + + V +E++++R+LWS + F IV K
Sbjct: 1 MAGALAYVFWGVLPIYWKLVTNVPPMEILAYRILWSFIFMLFLIVCLRKASMVFEETKAI 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L PK + ++ +A ++ +W FIY + + S Y++ P+++V L +V LKERL+
Sbjct: 61 LLQPKTLIAIIVAAFLVTGNWFLFIYTVNSGHVTEASLGYYINPLVNVLLATVILKERLS 120
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+IIA + + +LI+T H +P ++ +AVT+S Y +K +PV G +E ++
Sbjct: 121 RGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKLVPVSVWTGLTLETMII 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL YV++ +G + + G G++ + +F+ K+ + VG ++
Sbjct: 181 TPFALIYVLFFATNGLMQYPSSTNIILI---GAGVVTAIPLLLFATAAKKISYTMVGFLQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
Y P LM+ V + K+ D ++ F + +A++++ + V ++ K K
Sbjct: 238 YIGPTLMLAIGVLLFKESFDHIQLFAFAFIWLALIIFTISHVYSATKIKQ 287
>gi|219668790|ref|YP_002459225.1| hypothetical protein Dhaf_2764 [Desulfitobacterium hafniense DCB-2]
gi|219539050|gb|ACL20789.1| protein of unknown function DUF6 transmembrane [Desulfitobacterium
hafniense DCB-2]
Length = 305
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/310 (10%), Positives = 97/310 (31%), Gaps = 20/310 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L F +WG T + T+ L E ++ +E++ R + A +
Sbjct: 3 TRKELQGHLLAFMTIFIWGTTFISTKLLLESITPVEILFLRFAIGFLILLLAYPHRLRIR 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +++ AL ++P + +F
Sbjct: 63 E-------RKQDLYFAAAGLCGVTLYFLLENIALTYTFASNVGVIVAISPFFTALFAHLF 115
Query: 139 -LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----------WSAYCFARK 186
E+L I + ++ +++++ + L + +S
Sbjct: 116 LDTEKLRVRFFIGFSVAVVGIILISFNGSNNLQLNPLGDILAVLAAVVWAAYSVLTKKIS 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + + GF+ L ++ F
Sbjct: 176 GFHYNTIQATRRIFFYGLVFMIPALCILGFNPDITELTRPNNLFNILFLGLGASALCFVT 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ +K + Y P++ ++++V +L++ I V + + + +++
Sbjct: 236 WNSAVKLLGAVKTSVYIYLVPVITVITAVIVLREEITGVSVLGIVLTLTGLLISERKGRH 295
Query: 307 NSGKNKTKKS 316
+ + K+
Sbjct: 296 IPQQTEASKA 305
>gi|257791176|ref|YP_003181782.1| hypothetical protein Elen_1424 [Eggerthella lenta DSM 2243]
gi|257475073|gb|ACV55393.1| protein of unknown function DUF6 transmembrane [Eggerthella lenta
DSM 2243]
Length = 530
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/311 (11%), Positives = 90/311 (28%), Gaps = 12/311 (3%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVIS 57
MG+ G + + + + G +F I WG + Q + V V +
Sbjct: 1 MGQTVASGSGQGGGTAASGNH-VVRGIVFAALGGICWGFSGTCAQLMTSGFGVPVSWITC 59
Query: 58 HRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
R+L + +F + +LL + F+ + + ++ A+
Sbjct: 60 VRLLLAAV-IFLVVCGVREPRNLLAALRDVRSLGRIAAFALLGVLLTQVSYLSAISYTNA 118
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLL 170
+ + ++ + + ++ + +L I +++ L
Sbjct: 119 GTGTVLERLGLIVIMVYVCLRMRRLPRIREAAGLVLAIGGTVLIATKGNLGSLAIPAEGL 178
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
I ++ + V G FI + + +
Sbjct: 179 FWGIISAFALAFYTLLPGKVLEKWGSFIVTGLAMLIGGAVATVVVQPWTIPVEVSPELAG 238
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + + + GI A G++ P+ V S L P+ V +
Sbjct: 239 VMFAMIIVGTFAAYLFYLQGITDAGPVRAGLVGCVEPVSATVISAVWLGTPVGVVDVVGC 298
Query: 291 GIVVIAMVVYL 301
+++ + +
Sbjct: 299 AMIIGMVFLVT 309
>gi|148653051|ref|YP_001280144.1| transporter DMT superfamily protein [Psychrobacter sp. PRwf-1]
gi|148572135|gb|ABQ94194.1| RarD protein, DMT superfamily transporter [Psychrobacter sp.
PRwf-1]
Length = 316
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 71/312 (22%), Positives = 143/312 (45%), Gaps = 3/312 (0%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL 64
AT + K T G + A+ +WG P Y + L + + +E+I HR++W+
Sbjct: 4 ATPTNSTPSKPKPAVVHTTSKGIITALIAFSIWGSFPFYFKRLGEYNAVEIIGHRIIWTF 63
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
+ ++ + P+ + + S+ I+A +W +++A+ Q S Y
Sbjct: 64 VCLSLVLIVSKR-WQWIATLKAQPRLIWITFLSSLIIATNWLTYVWAVNANQILEASLGY 122
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCF 183
F++P+I + L VFL+ERL LQ IA I S+LI + G P +SL +A ++S Y
Sbjct: 123 FISPLIGILLSLVFLQERLRPLQWIAVGFAISSVLIQVIMLGNLPWVSLILACSFSVYGV 182
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
++ P+ + + F+E +L +++ + + + F + + G +
Sbjct: 183 MQRRTPLPALDSLFLETALLVPLCIWWFMTSNVASSSLSFWWSDNIWFL-MLAGPITLIP 241
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+F+ K S + M Y P ++ + ++F +P DT R ++FG++ ++++ +
Sbjct: 242 LLLFNQSTKMVAYSILSFMNYLTPTIIFLLAIFYYHEPFDTHRLMIFGLIWFGLLLFSID 301
Query: 304 TVINSGKNKTKK 315
N + K
Sbjct: 302 LWQNRPSKQLNK 313
>gi|227503306|ref|ZP_03933355.1| DMT superfamily drug/metabolite transporter [Corynebacterium
accolens ATCC 49725]
gi|227075809|gb|EEI13772.1| DMT superfamily drug/metabolite transporter [Corynebacterium
accolens ATCC 49725]
Length = 291
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 147/291 (50%), Gaps = 4/291 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F AYI+WG P + L + LE+++HRVLW+ V +++ G L++ +
Sbjct: 1 MIFTLAAYIMWGFFPAFFPLLLPATPLEILAHRVLWTAVIVTAFLIFSGGWRELVRMDKR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + V+WG ++ A+ T + YF+ P++SV LG +FLKE+L
Sbjct: 61 TWGWLAA---GGVFITVNWGTYVLAINTDHVADAALGYFINPLVSVALGMIFLKEQLRPW 117
Query: 147 QIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q A + +++L +T G P +SL +A ++ Y +K + V ++ E V++
Sbjct: 118 QATAVAVAAIAVLYLTFFIGQAPYISLLLAASFGIYGLIKKQVRVSAAVSVAAESLVVSP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ Y+VW +G F P L LI GL+ + F+ G + +LST+G+++Y
Sbjct: 178 IAIAYIVWIEQAGRGTFSSDGTPHMLLLISAGLITALPLLCFAQGARTLRLSTIGMLQYL 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P++ ++ ++F+ ++ R I FGI+ +A+ +Y+ + K +
Sbjct: 238 TPIMQMLWALFVTQEHFSAHRWIGFGIIGVAVSIYIADLIRVRQSAPRKSA 288
>gi|227543155|ref|ZP_03973204.1| DMT superfamily drug/metabolite transporter [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227180964|gb|EEI61936.1| DMT superfamily drug/metabolite transporter [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 295
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 129/278 (46%), Gaps = 4/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L Y LWG+ P Y LE +E+I+HR+ W+ + V L
Sbjct: 1 MLLGALCYFLWGLFPAYFPLLEPAGAVEIIAHRITWTAVLMGIVCVATGAHRELRA---L 57
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G+L + ++A +W +++A+ + + YF+ P+++V G ERL L
Sbjct: 58 RASQWGVLAVAGILVASNWLIYVFAVNSGHVAEAALGYFINPLVNVAFGMAIFGERLQPL 117
Query: 147 QIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +A + ++++ +T+ P L + +AVT++ Y +K + + S E VLA
Sbjct: 118 KKVAVGIATVAVVFITVAEGSFPFLGVGVAVTFALYGAVKKKVTISSVASVTAETAVLAP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ ++V+ +G F L G++ +F ++R LST+G++++
Sbjct: 178 FAIAFLVYMEATGSGTFTGNGPGHAALLSTTGIVTGVPLLLFGTAVQRVSLSTMGMLQFI 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+P + ++ + + T R + F I+ +A+ +YL+
Sbjct: 238 SPTMQFFWALLVTHEEFSTTRWVGFFIIWVAIGMYLVS 275
>gi|294853546|ref|ZP_06794218.1| predicted protein [Brucella sp. NVSL 07-0026]
gi|294819201|gb|EFG36201.1| predicted protein [Brucella sp. NVSL 07-0026]
Length = 630
Score = 90.0 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 93/291 (31%), Gaps = 7/291 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F +Y + ++ +FL+ +S E+ + + + F+
Sbjct: 2 LYGILLAFASYAAFAVSDACVKFLDGTLSPYEIAFY-----GAVLGLLAIPFTKKADDAW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L +FLKE+
Sbjct: 57 LDMFRTGNIKMWLLRTVTAAMGVIGSVAAFTYLSMAEAFALIFLLPAYVTILSVIFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L++ L + + A I + +
Sbjct: 117 VGWRRWSAVAIGFAGVLVVLRPGFRELSIGHLGALAAGMGGATSIIIFRVMGKNEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G + ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLVGPILICGALMAPSYQAPGTMQWVYLAGYGLLAALANILLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIV-VIAMVVYLLPTVINSGKNK 312
+Y+ + I+ F+ ID I ++ + + + K +
Sbjct: 237 QYSQMIWAILFGYFVFHDRIDMPMLIGIVLITISGLFTRSSASASAVWKAR 287
>gi|85707999|ref|ZP_01039065.1| hypothetical protein NAP1_02150 [Erythrobacter sp. NAP1]
gi|85689533|gb|EAQ29536.1| hypothetical protein NAP1_02150 [Erythrobacter sp. NAP1]
Length = 306
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++ P+ G AYI+WG PLY + V E + R++W+LP + IV F
Sbjct: 5 NDPSASPSPSGLPAALGAYIIWGFLPLYLLLVTAVPPFEFVGWRIIWTLP-LCLLIVAFR 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ L+ L N + + L SA ++A++W +I+A++ Q + S Y++ P+++V LG
Sbjct: 64 SQFAELRRALSNKRTMLALFASAILIAINWFVYIWAIMQNQVYAASLGYYLNPLLNVLLG 123
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ L ERL+ Q +A + + ++ +SL + +++ Y RK I VGS
Sbjct: 124 TLLLGERLSRWQWLAVAIAASGVALLAAGALTTLWISLTLGLSFGLYGIVRKQIDVGSLP 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G IE +L +PA+ V W S F ++ +L +I G++ + +F+ +R
Sbjct: 184 GLTIESMILLVPAIGIVAWYAASPAGPSFGNDLFLSLAIIFSGVVTAVPLLLFAIAARRM 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
ST+G ++Y AP ++ + + + V+ F ++ A+ +++ + S +
Sbjct: 244 DYSTLGFIQYLAPTIVFFLGLTVFGAQLRPVQLGSFVLIWTAVAIFVADLWLRSRR 299
>gi|18976481|ref|NP_577838.1| hypothetical protein PF0109 [Pyrococcus furiosus DSM 3638]
gi|18892024|gb|AAL80233.1| hypothetical protein PF0109 [Pyrococcus furiosus DSM 3638]
Length = 281
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 99/277 (35%), Gaps = 6/277 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + A ++WG ++ +F +S L V RV + + L
Sbjct: 3 KGKIKIVIAMLIWGSVGVFARF-SGLSGLGVAFARVSLGSIFLLIILGAKRRIREALDCI 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+NP + + LA++W FF L Y+ +P+I+ L FLKE++
Sbjct: 62 ARNPLPYIGI---GSALALNWIFFFTGLEYTTIANVVLVYYTSPIIATLLSWKFLKEKVK 118
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF--IEMCV 202
++ A L L L I+ I + + A A + + F ++ +
Sbjct: 119 KSRMFAISLAFLGLGIIISGQEISINNRDFIGIMFALIAAFFYALIPNLGRFLKKVKGEI 178
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L L + +G + + ++ G+K +S ++
Sbjct: 179 LTFLQLLVASFLMLPIISVVDVGKPVWWSIGVLVTVHTVLALFLYMDGLKEVSVSEAALL 238
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P+ ++ + I + I G+++IA +
Sbjct: 239 SYLDPISAVIYGIIIFGEVPSIYTIIGGGLILIATAL 275
>gi|298250019|ref|ZP_06973823.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297548023|gb|EFH81890.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 323
Score = 90.0 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/316 (14%), Positives = 101/316 (31%), Gaps = 14/316 (4%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVF-CAYILWGITPLYTQF-LEQVSVLEVISHRV 60
+ AT+ + + + GTL W + + + L S + R
Sbjct: 7 QQATEILAHETIPAHKSQTHLGRGTLLALVITIFCWASSFVGIRAGLHGYSPTHLALLRY 66
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
L + + L +D G+ + +A + L+ ++
Sbjct: 67 LVASLVLALYASVKRMPLPQWRD------LPGLTLTGVVGIAFYNVVLNTGELSVSAGIS 120
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL------SLAI 174
SF P+I+ L V LKERL L LL I + I+TL +G + + +
Sbjct: 121 SFLVNTGPIITALLAMVLLKERLRPLGWGGILLSITGVSIITLSTGEGIHLSVGVLFVLL 180
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
A + F + + + L ++++ E T +
Sbjct: 181 AALAQSLYFVWQKPYLARYSALQCTTYAIWTGTLALLIFSPGLIPEIQAASWSETTAVVY 240
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ + ++Y + R + Y P + + + F L + + + I +
Sbjct: 241 LGIFPAAIGYVSYAYALARIPATRAASFLYLVPPVTLGIAWFWLGEWPTWLALVGGVIAI 300
Query: 295 IAMVVYLLPTVINSGK 310
+++ + + +
Sbjct: 301 SGVIIVNVFGKTQTRR 316
>gi|56962543|ref|YP_174269.1| transporter [Bacillus clausii KSM-K16]
gi|56908781|dbj|BAD63308.1| transporter [Bacillus clausii KSM-K16]
Length = 302
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 144/293 (49%), Gaps = 7/293 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS---GGLSLLK 82
G + +Y +WG+ PLY L+ + L+++ +R+ ++ + +++ + LK
Sbjct: 10 GIVAASSSYFIWGLLPLYWALLKHLPSLDILMYRIAFAFVFIAMLLLFSKQKAHYRTELK 69
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
N + + ++ +++++W FI+A+ + S Y++ P+++V L ++FLKE+
Sbjct: 70 WVFTNGRVFMSIFAASILISLNWFIFIFAVSGEKVVDASLGYYINPLLNVVLATLFLKEK 129
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ ++ A + +L++ + G P S +A+T+ Y F ++ P+ ++ G FIE
Sbjct: 130 LSKAEVAAVASATIGVLLLIIIDGHIPWASFGMALTFCLYGFIKRAAPLSATGGLFIETL 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ AL Y F L G G++ + +FSYG KR S +G
Sbjct: 190 LVVPVALCYF---AFFTAYPLTSFTPLMIALLFGAGVVTAVPLLLFSYGAKRISFSLIGF 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++Y AP LM++ +F+ +P V+ F + + +VV+ ++ + +
Sbjct: 247 LQYVAPTLMLLLGIFVFGEPFSIVQFFAFFFIWVGLVVFTSSRLLGHRQQRIN 299
>gi|269798820|ref|YP_003312720.1| RarD protein, DMT superfamily transporter [Veillonella parvula DSM
2008]
gi|269095449|gb|ACZ25440.1| RarD protein, DMT superfamily transporter [Veillonella parvula DSM
2008]
Length = 298
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 2/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI--VYFSG 76
+ G + YI+WG+ PLY L VS +++ R++WS + + ++F
Sbjct: 1 MDHTSKKGLITALSCYIIWGLLPLYWALLNHVSPYNILAQRIIWSGICMAIVVFGLHFKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L+ +A I++V+W +I+A+ Q TS Y++ P+ +V LG
Sbjct: 61 FKKDFQLLKEQRSQLFLLLVAAVIISVNWFTYIWAIANNQVMNTSLGYYINPLFNVVLGV 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ KE L+ + ++ L+ + + ++T G L I A K + S
Sbjct: 121 ILFKEVLSIPKKLSVLIATIGIALLTYQVGSLPLVSMILAVSFGLYGAVKKKLLISPFTS 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L P + +F + ++ LI GL S +FSYG + L
Sbjct: 181 IAFEAWLLTPLALLYTTMIDNTVWSYFSTDWYTSMLLIACGLTTSVPLVLFSYGAQLLPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ +G ++Y +P + ++ ++F + T + I FG + IA+V++ L + I +
Sbjct: 241 NLLGFLQYVSPTIALLLAIFYFGESFGTPQMIAFGCIWIALVLFSLSSQITT 292
>gi|303229772|ref|ZP_07316552.1| protein RarD [Veillonella atypica ACS-134-V-Col7a]
gi|302515532|gb|EFL57494.1| protein RarD [Veillonella atypica ACS-134-V-Col7a]
Length = 298
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 2/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G ++WG+ PLY L QVS V+SHR++WS + I+ +
Sbjct: 5 NKKGLSTTLLCCLIWGLLPLYWALLNQVSSFSVLSHRIIWSGFWMLVLIIVTGRQQLRID 64
Query: 83 DTLKNPKAVG--MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+L+ +A +++++W +I+A+ + TS Y++ P+++V LG + K
Sbjct: 65 IQHLRAHLSQFGLLLLAAVLISINWFTYIWAVTNQHVLDTSLGYYINPLLNVLLGILIYK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L Q ++ + IL + IMT+ G + + + A K
Sbjct: 125 ESLLWPQKLSIAIAILGVAIMTVQLGTLPIVSIVLAVSFSLYGAVKKRLTIHPFSSIAFE 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L P + + + F P L LIG GL S +FSYG + L+ +G
Sbjct: 185 AWLVTPVALWYLTAMDTTSWTFIENLTPTGLLLIGAGLTTSIPLILFSYGARLLPLNILG 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++Y +P + ++F + T + I FG + +A+V++ L + +
Sbjct: 245 FLQYLSPTMGFFLAIFYFGESFGTAQLIAFGCIWVALVLFTLSNQMTTR 293
>gi|257792749|ref|YP_003183355.1| hypothetical protein Elen_3023 [Eggerthella lenta DSM 2243]
gi|257476646|gb|ACV56966.1| protein of unknown function DUF6 transmembrane [Eggerthella lenta
DSM 2243]
Length = 312
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 82/296 (27%), Gaps = 16/296 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
F+ A +WG+ + + +++ ++ R + + ++ L K
Sbjct: 4 AFLLVAAAIWGLGTVVIKSTVDEFPPAWLVGVRFTVAGIILGIVMLPRFRKALDLDHLKK 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
L + + L ++F + VI FLG R
Sbjct: 64 -------GAILGAFLFLSYWANSTGLTDTTASNSAFLTSLYCVIIPFLGWALRGPRPTRF 116
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
I AAL+ + + ++ G + L+ + K +
Sbjct: 117 NIAAALVCVAGVGCVSFAGLSGFSLRFGDLITLLSAFFLSLHVLYTAKYARGRDMTLLTV 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++A F LG + + ++ + +
Sbjct: 177 VQFLVAGVLGFGAGLAFEPMPAFASLGLDTWVSLGYLAVFASCIALLLQNFAVAHVDPAP 236
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ T + + SV L + + F ++ +V+ + K + +
Sbjct: 237 ASLFLATESVFGVTFSVLFLGEILTGPLFAGFALIFAGIVISEYLPLRAEKKRRAR 292
>gi|325283882|ref|YP_004256423.1| hypothetical protein Deipr_1672 [Deinococcus proteolyticus MRP]
gi|324315691|gb|ADY26806.1| protein of unknown function DUF6 transmembrane [Deinococcus
proteolyticus MRP]
Length = 298
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 89/286 (31%), Gaps = 10/286 (3%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L V A LWG+ ++ ++ +S LEV R
Sbjct: 6 LCVVLAACLWGLLGIFGKYAQEAGISPLEVAFWRAAVGGALFALHAAAAQQRFP------ 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +F +++ +G + A+ L S + P G + L+E
Sbjct: 60 RGRDLLWTALFGIVGVSLFYGAYQLAVQAAGASLASVLLYTAPAFVALWGWLLLREPSGL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIA--VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ A + + +++L G + A + G L
Sbjct: 120 RELGAVAFTLGGIALISLGGGENIRVTPAALTWGLLSGSSYSLYYLYGKLFFSRYSAAAL 179
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+ + + L + ++S G++R + ++
Sbjct: 180 YAVAMPVGALGLLPLTDFAAKSLVAWLALGAVALLSTYLAYLLYSAGLERLSATQTSVIA 239
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P++ + ++ + + + + G+V+ A ++ +P +
Sbjct: 240 SLEPVVAGLLALALFGEKPGLLALVGAGLVLAATLLLSVPRRVQGR 285
>gi|169824965|ref|YP_001692576.1| putative mambrane protein [Finegoldia magna ATCC 29328]
gi|167831770|dbj|BAG08686.1| putative mambrane protein [Finegoldia magna ATCC 29328]
Length = 302
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 91/291 (31%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + L+ + ++ R L + F ++ + +
Sbjct: 2 NNRTKGIIAILLSAFGFALMNLFIPLAGDLPTIQKSFFRNLIAFLVAFALLLKSNKKEEV 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ A++ YAL S + P ++ L VFLK
Sbjct: 62 KELHDVKSIPWKTLILRASLGTAGIFCNYYALDHLFISDASVLNKLAPFATLILSWVFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E L II+ L+ + +L + +L I + T +
Sbjct: 122 EDLRKEHIISILIAFVGVLFVVKPTLQIQEILPYLIGILGGVCAGGAYTCVRKLNTLGVN 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++A + F + +F L LIG GL + K A S
Sbjct: 182 SSFIVAFFSGFSCIVCIPFMIFNFVPMGTSSILALIGVGLAALIGQFGITLAYKFAPASE 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +Y+ + + L Q D + I + ++ ++ +
Sbjct: 242 ISVFDYSTIIFTGLFGFLFLHQSPDYLSIIGYVLIFSGALINFMNNRRKQR 292
>gi|210629854|ref|ZP_03296151.1| hypothetical protein COLSTE_00034 [Collinsella stercoris DSM 13279]
gi|210160794|gb|EEA91765.1| hypothetical protein COLSTE_00034 [Collinsella stercoris DSM 13279]
Length = 360
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 86/296 (29%), Gaps = 11/296 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
AS ++G + WG + FL Q+ + +++ R L + ++
Sbjct: 66 NNKASRQALIGVIATLLGGSFWGFSGTSASFLFANYQIDTMWLMAVRQLGAGAVFMVVVL 125
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F L + + + + ++ F++ A+ + + VI +
Sbjct: 126 LFDRE-RLKRLLTTPRDLATLAAMAVLGVFLNQLFYLLAVRLTNAGTATVLQCLQLVIIM 184
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFAR 185
G V ++ +L ++ L + + + A C
Sbjct: 185 AFGCVRQHRAPRRREVAGVVLAFGGTFLIATGGDPTRLAIPFEGLVVGLIAAFGAACMTI 244
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ G I + L ++ + + +
Sbjct: 245 IPGRILPKYGSSIVTGTAMFSSGIATSLVVQPWNNVPALDAAGWQALIVLIFVGSCLAYA 304
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ G+K ++ P+ V+S +L I F +++ + + +
Sbjct: 305 LYMQGVKDIGSVRASLIGTVEPVSATVTSALMLGTVFAPTDLIGFACIIVMVFLTV 360
>gi|325832896|ref|ZP_08165569.1| putative membrane protein [Eggerthella sp. HGA1]
gi|325485761|gb|EGC88225.1| putative membrane protein [Eggerthella sp. HGA1]
Length = 550
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/302 (11%), Positives = 87/302 (28%), Gaps = 11/302 (3%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPG 66
+G + + G +F I WG + Q + V V + R+L +
Sbjct: 29 SGQGGGTAASGNHVVRGIVFAALGGICWGFSGTCAQLMTSGFGVPVSWITCVRLLLAAV- 87
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
+F + +LL + F+ + + ++ A+ + +
Sbjct: 88 IFLVVCGVREPRNLLAALRDVRSLGRIAAFALLGVLLTQVSYLSAISYTNAGTGTVLERL 147
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWS 179
++ + + ++ + +L I +++ + L I ++
Sbjct: 148 GLIVIMVYVCLRMRRLPRIREAAGLVLAIGGTVLIATKGNLGSLAIPAEGLFWGIISAFA 207
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
+ V G FI + + + + +
Sbjct: 208 LAFYTLLPGKVLEKWGSFIVTGLAMLIGGAVATVAVQPWTIPVEVSPELAGVMFAMIIVG 267
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + GI A G++ P+ V S L P+ V + +++ + +
Sbjct: 268 TFAAYLFYLQGITDAGPVRAGLVGCVEPVSATVISAVWLGTPVGVVDVVGCAMIIGMVFL 327
Query: 300 YL 301
Sbjct: 328 VT 329
>gi|257868262|ref|ZP_05647915.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257874465|ref|ZP_05654118.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257877862|ref|ZP_05657515.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257802376|gb|EEV31248.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257808629|gb|EEV37451.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257812028|gb|EEV40848.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 301
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 76/293 (25%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLL 81
G F AY+LWG+ LY + + VS L + +R++WS + IV L
Sbjct: 4 KGVYFGLSAYVLWGLVTLYWKIIVGVSPLATMCYRIVWSFVFMVLFIVLSGKKTQFLQEA 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ KN G++V ++ +++++W FI+A+ S Y++ P+++V L +VFLKE
Sbjct: 64 RLLWKNKAFAGLIVLASVLISINWFTFIFAVSAGHVMQASLGYYINPLVNVLLATVFLKE 123
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ ++A LL + ++++++ +G IP SL +A ++S Y +K IP+ S G IE
Sbjct: 124 RLSRTGMLACLLASIGVILLSIQTGTIPYASLIMAFSFSTYGLIKKRIPISSVTGLTIET 183
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ AL Y++ G ++ L + G G++ + +F+ K T+G
Sbjct: 184 MVIFPFALVYILGFSTVGFMNYPLQTNLLLM---GAGIVTAIPLLLFAEAAKNVSYITLG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++Y P +M++ ++F+ + + F + + + V+ T+ + K +
Sbjct: 241 FIQYVNPTIMLLLAIFLFHETYSLAQFSAFAFIWLGIAVFTYGTLGTAMKERR 293
>gi|270488821|ref|ZP_06205895.1| protein RarD [Yersinia pestis KIM D27]
gi|270337325|gb|EFA48102.1| protein RarD [Yersinia pestis KIM D27]
Length = 264
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 2/265 (0%)
Query: 50 VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI 109
+ E+++HRV+WS + ++ S ++D KN K + +L +A ++A +W FI
Sbjct: 1 MPADEILTHRVIWSFFFM-LILLTVSRHWPQVRDACKNRKRLLLLAVTAVLIASNWLLFI 59
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-P 168
+A+ S YF+ P+++V G +FL ER +Q +A L +LI G P
Sbjct: 60 WAVNHNHMLEASLGYFINPLVNVLFGMLFLGERFRRMQWVAVALAFAGVLIQLWQFGSLP 119
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
++ L +A+T++ Y RK + V + G IE L A Y+ + S H
Sbjct: 120 VIGLGLAITFALYGLLRKKLGVDAQTGMLIETMWLLPVAAVYLFFIADSPTSHLSANAWS 179
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L L G++ + F+ R +LST+G +Y P LM + +V + I + +
Sbjct: 180 LNLLLAAAGVITTIPLLFFTAAATRLRLSTLGFFQYLGPTLMFILAVTFYGETIGNDKMV 239
Query: 289 VFGIVVIAMVVYLLPTVINSGKNKT 313
F + A++++ L + K +
Sbjct: 240 TFIFIWAALLLFTLDALYTQRKLRR 264
>gi|182415522|ref|YP_001820588.1| hypothetical protein Oter_3713 [Opitutus terrae PB90-1]
gi|177842736|gb|ACB76988.1| protein of unknown function DUF6 transmembrane [Opitutus terrae
PB90-1]
Length = 307
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 81/302 (26%), Gaps = 8/302 (2%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVF 68
+ + G + + ++L + E ++ R L S V
Sbjct: 4 DRSSAAPPAPDRSHLAGITLAVSGVLCFACMDTCAKWLNRTLPPAETVAIRYLGSFFFVL 63
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
+ K + +G+ + L + AL + F P
Sbjct: 64 LLV------KPWQKPAVMRTHRLGLQCARSCCLVLGTLCSFTALRYLPLTQVTSITFSAP 117
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+I L L ER+ + +A + +L+ T + L A+ +A A I
Sbjct: 118 LIVALLAGPLLGERIGPRRAVAVCVGFAGVLVATRPTPGGLHPAALLCLGNAITSAFYYI 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIF 247
L + + + + L L+ G L + +
Sbjct: 178 FTRRLAAHDQPETTLFYTSFVGSLVCLPMLPFVWVMPATWGAWLALLVLGALGALAHWLL 237
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
KR S + Y + + + + IV+ + + + +
Sbjct: 238 ILAHKRTPASVLAPFFYAQLIGAAGLAWLAFGEIPTGWTILGGSIVLSSGLYLVYRERVR 297
Query: 308 SG 309
Sbjct: 298 QK 299
>gi|220915925|ref|YP_002491229.1| RarD protein, DMT superfamily transporter [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219953779|gb|ACL64163.1| RarD protein, DMT superfamily transporter [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 301
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + AY+LWG PLY + L V E+++HRVLWS+ + ++ GG S
Sbjct: 3 SRSRGLAYALAAYLLWGAFPLYFKALHGVPAPEILAHRVLWSVVLLAGIVLL--GGRSGQ 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P G+L +A ++A +W +I+A+ + S YFV P+++V LG FL+E
Sbjct: 61 LRDALRPGRRGVLAVTAVLIAANWLIYIWAVNAGRVLEASLGYFVNPLVNVLLGMAFLRE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ +Q +A L + ++ + G P L L++A+++ Y RK + G E
Sbjct: 121 RLSRVQALAVALAGAGVAVLVVRLGTVPWLPLSLALSFGLYGLLRKRAGIDPIGGLLAET 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+LA AL Y+V G G F G L+ G + + F+ G++ +LST+G
Sbjct: 181 ALLAPVALAYLVLRGTGGEGAFGHGAWRTA-LLVAAGPVTTVPLVWFAIGVRSLRLSTMG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+++Y P + + +V + ++P I FG + +++ Y + +
Sbjct: 240 LVQYITPTIQFLMAVALFREPFTRTHAIAFGCIWVSLAAYTWDALARVRR 289
>gi|197121221|ref|YP_002133172.1| RarD protein, DMT superfamily transporter [Anaeromyxobacter sp. K]
gi|196171070|gb|ACG72043.1| RarD protein, DMT superfamily transporter [Anaeromyxobacter sp. K]
Length = 301
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + AY+LWG PLY + L V E+++HRVLWS+ + ++ GG S
Sbjct: 3 SRSRGLAYALAAYLLWGAFPLYFKALHGVPAPEILAHRVLWSVVLLAGIVLL--GGRSGQ 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P G+L +A ++A +W +I+A+ + S YFV P+++V LG FL+E
Sbjct: 61 LRDALRPGRRGVLAVTAVLIAANWLIYIWAVNAGRVLEASLGYFVNPLVNVLLGMAFLRE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ +Q +A L + ++ + G P L L++A+++ Y RK + G E
Sbjct: 121 RLSRVQALAVALAGAGVAVLVVRLGTVPWLPLSLALSFGLYGLLRKRAGIDPIGGLLAET 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+LA AL Y+V G G F G L+ G + + F+ G++ +LST+G
Sbjct: 181 ALLAPVALAYLVLRGTGGEGAFGHGAWRTA-LLVAAGPVTTVPLVWFAIGVRSLRLSTMG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+++Y P + + +V + ++P I FG + +++ Y + +
Sbjct: 240 LVQYITPTIQFLMAVALFREPFTRTHAIAFGCIWVSLAAYTWDALARVRR 289
>gi|114571416|ref|YP_758096.1| transporter DMT superfamily protein [Maricaulis maris MCS10]
gi|114341878|gb|ABI67158.1| RarD protein, DMT superfamily transporter [Maricaulis maris MCS10]
Length = 300
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 4/296 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ S Y++WGI+PL+ Q LE S +E+I HRV+W++P + + S
Sbjct: 2 STDTSTDMRRALAAGLSGYLIWGISPLFFQTLEFASAVEIILHRVVWAVP-LLAGSLALS 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G L L + + + L+ ++ +++V+W FI+A+ T S Y++ P++SV +G
Sbjct: 61 GRLRASLGVLSDRRTLLTLLATSALISVNWWGFIFAVNTGHVLQASLGYYINPLMSVAVG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L+E L +I A L L + + G P LSL +A T++AY + RK V
Sbjct: 121 VIILREPLGPWRIAAIALAALGVANQIITVGEVPWLSLMLATTFTAYGYLRKVAAVDGRA 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G E L A+ +VW S G F N L+ GL+ +++ G++
Sbjct: 181 GLLWETLFLFPFAIIGLVWLQVS-GAGHFTENPSQAGLLMAAGLVTVVPLLLYTIGVRGL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+LST+G++++ AP L + + +T I F + + + + K
Sbjct: 240 RLSTMGLLQFIAPTLQFTIGILT-GETFETGHLITFAFIWSGVGCFTWSQLRRERK 294
>gi|295705807|ref|YP_003598882.1| hypothetical protein BMD_3699 [Bacillus megaterium DSM 319]
gi|294803466|gb|ADF40532.1| putative membrane protein [Bacillus megaterium DSM 319]
Length = 315
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 90/290 (31%), Gaps = 14/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
A +LW + + T+ L + + R + + + F ++ +
Sbjct: 25 ISASVIAVLLWSTSFVGTKIAYTSFPPLTLGAARFVIAAVILGFILLIRKDKIKPSF--- 81
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
M + +++ + + P I+V + +F +++ +
Sbjct: 82 --KDIGLMSISGVLGTTLYFSLENIGVELTTASNAAIIVASYPAITVLMEFLFFRKKTSR 139
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFF 197
++ I + ++ + ++ + A A V
Sbjct: 140 VKAIGIGVAMIGVYQISYSPETQTDDKQLIGNIILILAGFIFALYNFTTRKVVKKYSMIT 199
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I A+ ++ L + F ++++G+++ S
Sbjct: 200 ISFYQTLAGAITFIPLAFIEKSSWQTPDIRSFLTLLYLGVFCSVIAFLLYNFGLRKLSSS 259
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + P+ ++ SV +L + + + I IV++ +V+ + T
Sbjct: 260 SAMTLMNLVPIFGVLFSVLLLHEVVGINQFIGGIIVLLGVVLSMRETRKK 309
>gi|172040868|ref|YP_001800582.1| putative RarD protein [Corynebacterium urealyticum DSM 7109]
gi|171852172|emb|CAQ05148.1| putative RarD protein [Corynebacterium urealyticum DSM 7109]
Length = 300
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 72/291 (24%), Positives = 158/291 (54%), Gaps = 6/291 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L+ F AYI+WG P + LE + +E+++HR +W+L V ++ L + T +
Sbjct: 1 MLWGFAAYIMWGFFPAFFPLLEPAAPVEILAHRFIWTLAFVVLLLLALRRIKLLRQITAR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V + ++ +++V+WG +IYA+ + + YF+ P++SV LG + L+E L +
Sbjct: 61 EWIRVAV---ASLLISVNWGLYIYAVNSGHVADAALGYFINPLVSVILGVLLLRESLRPM 117
Query: 147 QIIAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q ++ + ++++I+T+ G P ++SL +A+++ Y +K + + + E VLA
Sbjct: 118 QKLSVAIAAVAVVILTIALGQPPIISLGLALSFGFYGLVKKRMRLEPLQSLAAETMVLAP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ Y++W G + T L+ G++ + F+ + L+++G+++Y
Sbjct: 178 IAVIYLLWLGPASTFTTE--GGRHTALLMIAGVVTALPLLAFARAAQEMSLTSLGMIQYL 235
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P++ ++ +VF+ K+ I+ +R + F I+ +A+V++++ V+ + + S
Sbjct: 236 TPVMQMLWAVFVTKEHIEPMRWVSFSIIWVAVVIFIIDMVVQTRATRRNAS 286
>gi|325831156|ref|ZP_08164480.1| putative membrane protein [Eggerthella sp. HGA1]
gi|325487077|gb|EGC89523.1| putative membrane protein [Eggerthella sp. HGA1]
Length = 325
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 82/296 (27%), Gaps = 16/296 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
F+ A +WG+ + + +++ ++ R + + ++ L K
Sbjct: 17 AFLLVAAAIWGLGTVVIKSTVDEFPPAWLVGVRFTVAGIILGIVMLPRFRKALDLDHLKK 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
L + + L ++F + VI FLG R
Sbjct: 77 -------GAILGAFLFLSYWANSTGLTDTTASNSAFLTSLYCVIIPFLGWALRGPRPTRF 129
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
I AAL+ + + ++ G + L+ + K +
Sbjct: 130 NIAAALVCVAGVGCVSFAGLSGFSLRFGDLITLLSAFFLSLHVLYTAKYARGRDMTLLTV 189
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++A F LG + + ++ + +
Sbjct: 190 VQFLVAGVLGFGAGLAFEPMPAFASLGLDTWVSLGYLAVFASCIALLLQNFAVAHVDPAP 249
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ T + + SV L + + F ++ +V+ + K + +
Sbjct: 250 ASLFLATESVFGVTFSVLFLGEILTGPLFAGFALIFAGIVISEYLPLRAEKKRRAR 305
>gi|224475870|ref|YP_002633476.1| putative permease [Staphylococcus carnosus subsp. carnosus TM300]
gi|222420477|emb|CAL27291.1| putative permease [Staphylococcus carnosus subsp. carnosus TM300]
Length = 296
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 102/295 (34%), Gaps = 6/295 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P + G + + + I + L+ + + V + R L ++ + +
Sbjct: 3 PKIKGIIAILISAIGFSFMSLFFRLSGDLPVFQKSLARNLVAMLIPLYFLY------KYK 56
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + +L+ +T+ V IYA+ + P ++ L VFL E
Sbjct: 57 QPMFGKLSSQPLLITRSTLGLVGVLLNIYAIDHMLLSDADTLMKLNPFWTILLSLVFLHE 116
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ Q+ A ++ I+ +L + + AI +S A V +
Sbjct: 117 KVRKYQVTAMVVAIIGMLFVVQPQFSSAMIPAIGGLFSGIFAAAAYTCVRALSTREAPYT 176
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ + F +V + + ++LIG GL + + A + I
Sbjct: 177 IVFYFSFFSIVALIPFVIFTYEPMSGMQIIYLIGAGLSAAVGQIGITLAYSYAPARDISI 236
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
Y + + + + I + D T+ + I++ A KNK ++
Sbjct: 237 FTYASIIFTAIMGIVIFGESPDLYATLGYVIIISASYYMFEKARRQGRKNKPARA 291
>gi|116618432|ref|YP_818803.1| permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|116097279|gb|ABJ62430.1| Predicted permease [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
Length = 296
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 66/298 (22%), Positives = 151/298 (50%), Gaps = 7/298 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G + AY+LWG+ ++ + L V ++ +++R++WSL + + + +
Sbjct: 3 NKRLGIISGLSAYLLWGMLGVFWKLLSVVPAMDTLAYRIVWSLVTISVVLTFQKSWKEVW 62
Query: 82 KDTL--KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +G+++ SA +++++W +I + Q S SY++ P+++V + +FL
Sbjct: 63 HVIIELIQNHKMGLIILSAFLISINWFLYIDMVTHEQATEASLSYYIMPLMNVVVAVIFL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L+ +I+A +L+I+ ++I+T+ +PL +L +A T+ Y +K +P+ ++ +
Sbjct: 123 HEKLSRSKIVALILVIIGVVILTIQTGSLPLNTLLMAATFCFYGLIKKQVPLPATISLTL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E +A AL Y+ F T+ LI G+L +F+ K T
Sbjct: 183 ETLFVAPIALVYL----FLSPHVMIQNGPKITILLIMSGILTVIPLLLFAVANKNTDFIT 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ ++Y P + ++ ++F+L + + + IVF + ++V+++ ++ + K K S
Sbjct: 239 LSFIQYLNPTIQLLMAIFVLHEAFNWHKVIVFAFIWTGILVFIIGSLNSYYKLKKTAS 296
>gi|303231638|ref|ZP_07318361.1| protein RarD [Veillonella atypica ACS-049-V-Sch6]
gi|302513587|gb|EFL55606.1| protein RarD [Veillonella atypica ACS-049-V-Sch6]
Length = 297
Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 2/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG--LSL 80
G ++WG+ PLY L Q+S V+SHR++WS +FF ++
Sbjct: 5 NKKGLSTTLLCCLIWGLLPLYWALLNQISSFSVLSHRIIWSGFWMFFLVIATGRQQLRMD 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ + +G+L+ +A +++++W +I+A+ + TS Y++ P+++V LG + K
Sbjct: 65 IQLLRTHLTQLGLLLLAAILISINWFTYIWAVTNQHVLDTSLGYYINPLLNVLLGILIYK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL Q ++ + L + IMT+ G + I + A K
Sbjct: 125 ERLLWPQKLSIAIAFLGVAIMTVQMGTLPIVSIILAVSFSLYGAVKKRLTIHPFSSIAFE 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L P + + + F P L LIG GL S +FSYG + L+ +G
Sbjct: 185 AWLVTPVALWYLATMDTSSWAFIENLTPTGLLLIGTGLTTSIPLILFSYGARLLPLNILG 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++Y +P + ++F + T + I FG + IA+V++ L I +
Sbjct: 245 FLQYLSPTMGFFLAIFYFGESFGTAQLIAFGCIWIALVLFTLSNQITTR 293
>gi|170017435|ref|YP_001728354.1| permease [Leuconostoc citreum KM20]
gi|169804292|gb|ACA82910.1| Predicted permease [Leuconostoc citreum KM20]
Length = 297
Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 65/296 (21%), Positives = 146/296 (49%), Gaps = 7/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G AY LWG+ ++ L V ++ +++R++WSL + I Y L
Sbjct: 2 SQKRLGISAAILAYSLWGVLGVFWALLHAVPAMDTLAYRIIWSLVTICLVITYQKSWSRL 61
Query: 81 LKDTLKNPKAVGMLVF--SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ T K + ++ S+ +++++W +IY + Q S Y++ P+++V + +F
Sbjct: 62 FQITKKLFHSHQLIWIILSSGLISINWFIYIYMVTHHQATEASLGYYIMPLMNVAVALIF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL+ ++A + + +LI+T+ +P+ +L +A ++ Y +K +P+ ++
Sbjct: 122 LHERLSRSNLVALAFVSVGVLILTIQTDSLPVNTLLMAASFCFYGLIKKQVPLPATISLA 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E +A AL Y++ + F H + T + G++ +F+ K
Sbjct: 182 LETMFVAPIALVYIMRSPF----HIINSGVQITALTVLSGVITVLPLLLFAVATKNTDFI 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
T+G ++Y P + ++ +VF+L + D + IVF + + +++++ ++ + K K
Sbjct: 238 TLGFIQYMNPSIQLLLAVFVLHENFDWHKAIVFVFIWVGILIFVTGSLHKAKKIKQ 293
>gi|114798108|ref|YP_762208.1| chloramphenicol-sensitivity protein (RarD) family protein
[Hyphomonas neptunium ATCC 15444]
gi|114738282|gb|ABI76407.1| transporter, chloramphenicol-sensitivity protein (RarD) family
[Hyphomonas neptunium ATCC 15444]
Length = 303
Score = 88.8 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 66/292 (22%), Positives = 138/292 (47%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G +Y++WG PLY + ++ LE+++HR+LWS+P I + +
Sbjct: 6 RLGFPAAVISYLVWGSLPLYIRAMQHTGALELLAHRILWSVPTAIIFIAIAANWRDVRAA 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ S ++ +W +I+A+ + S Y++ P+++V G + E+L
Sbjct: 66 FSGSNLKWLA--LSGLLIGANWTIYIWAVNADRTMEASLGYYINPLVNVLFGMLIFSEKL 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q +A + + + +M G P ++LA+ T+++Y RK + + S GF +E+ +
Sbjct: 124 RPAQWVAVGIAAIGVGVMAFAFGHIPWVALALCATFASYSVIRKKVAIDSRAGFLVEVVL 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLNSFVFCIFSYGIKRAKLSTVGI 261
LA AL ++VW + +LG + ++ + + F+ KR + ST+G+
Sbjct: 184 LAPVALGWLVWFATTQPGGRWLGEGGWDILMLMAAGPITAVPLIFFALATKRLRFSTIGM 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
M+Y P + + +V + K+ I F + A++V+ +++ K +
Sbjct: 244 MQYIGPTIQFLIAVLVFKEGFGMTHAIAFAFIWTALIVFTADSLMGDAKARR 295
>gi|118475678|ref|YP_891953.1| RarD protein [Campylobacter fetus subsp. fetus 82-40]
gi|118414904|gb|ABK83324.1| RarD protein [Campylobacter fetus subsp. fetus 82-40]
Length = 290
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 73/291 (25%), Positives = 152/291 (52%), Gaps = 4/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S+ G + + +WG+ P++ +F++ V +E+++HR++WS +F + + + +
Sbjct: 1 MSINDKKGLILGISTFAMWGVFPIFFKFIDSVGAIEILAHRIIWSAIILFILLKFRNKII 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + A+ + + ++A +WG FIYA+ Q TS YF+ P+ S+ LG++
Sbjct: 61 NVKRLLKIKKVALTL-FITGILIASNWGIFIYAVNQNQILATSLGYFINPLFSILLGAII 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE+L+ I+ L++ ++ I G P +SL + ++++ Y RK + + + EG F
Sbjct: 120 LKEKLSTTLKISILIVFFAICIQIYALGSLPFISLILPLSFALYGLIRKKVSIPTFEGLF 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE +L A+ Y+ + G + F LF G + F+ K KLS
Sbjct: 180 IETLLLVPIAIAYISYLGLNSNSKFGFELNGLLLF--LSGFVTIIPLLTFNASTKYLKLS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
T+G ++Y +P L ++ ++F+ + +D+ + I F ++ I++V+ + +
Sbjct: 238 TIGFLQYISPSLSLLIAIFVYNETLDSYKLISFILIWISLVIAGISGLWRK 288
>gi|110677637|ref|YP_680644.1| integral membrane protein, putative [Roseobacter denitrificans OCh
114]
gi|109453753|gb|ABG29958.1| integral membrane protein, putative [Roseobacter denitrificans OCh
114]
Length = 334
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 86/285 (30%), Gaps = 7/285 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G F A+ ++ + + + L S ++++ V++S P ++
Sbjct: 7 NPNVKGASFALIAFAVFALHDVIIKVLGSSYSPIQIVFFGVVFSFPLAMLYLL------R 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
P + + YA F P++ L L
Sbjct: 61 DTTSGTLLPVHPWWMAARTVAAVITGFCAFYAFSVLPLAQVYAILFAAPLLITILAIPIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ + +A + + +LI+ L +A SA C + +I V
Sbjct: 121 GEQVRWQRWLAVFIGLCGVLIVLRPGQQELALGHLAALVSAICGSFASIIVRKIGREERT 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ P + V + + D L +L + V
Sbjct: 181 VVIMLYPMMANFVVMAALLPLVYQPMPLADLGKLGVIAVLAWVAGRFLIAAYNSGEAVIV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
M+Y+ L V + D +++ + + +L
Sbjct: 241 APMQYSQILWATFYGVLFFDEVPDLPTIAGSAVIIASGLFIVLRE 285
>gi|310640566|ref|YP_003945324.1| membrane protein [Paenibacillus polymyxa SC2]
gi|309245516|gb|ADO55083.1| Putative membrane protein [Paenibacillus polymyxa SC2]
Length = 300
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/279 (10%), Positives = 86/279 (30%), Gaps = 14/279 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
A ++W + + T+ L + R + + + ++ + + K
Sbjct: 19 TILALLIWSTSFIATKAAYTTFPPLTLGLSRFIIASIVLGIVLLIKKEHVKV-----KPK 73
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + +++ + + P I+ L + K +L+ +I
Sbjct: 74 DLATISFSGVLGITLYFSMENIGVSLTTASNAALIVASYPAITSLLEFILYKVKLSKYKI 133
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIPVGSSEGFFIEM 200
L ++ + +T + A+ V +
Sbjct: 134 CGIALAMIGVYFLTSVGESSDGKNQLIGNLILIGTGFAWAFYTFMTRKVVDKYPPVTLSF 193
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++F++ L + + F +++YG+ + S+
Sbjct: 194 YQTVAGSIFFIPLALLEKDSWQAPTTGSFMLLMYLGVFCSVIAFLLYNYGLIKLSPSSSV 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ ++ SV +L + I + I +V++ +++
Sbjct: 254 SLMNLVPIFGVLFSVLLLHETITWRQIIGGLVVILGVLM 292
>gi|317488091|ref|ZP_07946668.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
gi|316912799|gb|EFV34331.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
Length = 530
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/311 (11%), Positives = 90/311 (28%), Gaps = 12/311 (3%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVIS 57
MG+ G + + + + G +F I WG + Q + V V +
Sbjct: 1 MGQTVASGSGQGGGTVASGNH-VVRGIVFAALGGICWGFSGTCAQLMTSGFGVPVSWITC 59
Query: 58 HRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
R+L + +F + +LL + F+ + + ++ A+
Sbjct: 60 VRLLLAAV-IFLVVCGVREPRNLLAALRDVRSLGRIAAFALLGVLLTQVSYLSAISYTNA 118
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLL 170
+ + ++ + + ++ + +L I +++ L
Sbjct: 119 GTGTVLERLGLIVIMVYVCLRMRRLPRIREAAGLVLAIGGTVLIATKGNLGSLAIPAEGL 178
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
I ++ + V G FI + + +
Sbjct: 179 FWGIISAFALAFYTLLPGKVLEKWGSFIVTGLAMLIGGAVATVAVQPWTIPVEVSPELAG 238
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + + + GI A G++ P+ V S L P+ V +
Sbjct: 239 VMFAMIIVGTFAAYLFYLQGITDAGPVRAGLVGCVEPVSATVISAVWLGTPVGVVDVVGC 298
Query: 291 GIVVIAMVVYL 301
+++ + +
Sbjct: 299 AMIIGMVFLVT 309
>gi|86157187|ref|YP_463972.1| hypothetical protein Adeh_0760 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85773698|gb|ABC80535.1| hypothetical protein Adeh_0760 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 301
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 4/290 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P G + AY+LWG PLY + L V E+++HRVLWS+ + + GG + L
Sbjct: 3 PRSRGLAYALAAYLLWGAFPLYFKALHGVPAPEILAHRVLWSVVLLAGIVFL--GGRTPL 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P G+L +A ++A +W +I+A+ + S YFV P+++V LG FL+E
Sbjct: 61 LRDALRPGRRGVLAVTAVLIAANWLIYIWAVNAGRVLEASLGYFVNPLVNVLLGMAFLRE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ +Q A L + ++ + G P L L++A+++ Y RK + G E
Sbjct: 121 RLSRVQAFAVALAGAGVAVLVVRLGTVPWLPLSLALSFGLYGLLRKRAGIDPIGGLLAET 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+LA AL Y+V G G F G L+ G + + F+ G++ +LST+G
Sbjct: 181 ALLAPVALAYLVLRGAGGEGAFGHGAWRTA-LLVAAGPVTTVPLVWFAIGVRSLRLSTMG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+++Y P + + +V + ++P + FG + ++ Y + +
Sbjct: 240 LVQYVTPTIQFLMAVALFREPFTRTHAVAFGCIWASLAAYTWDALARVRR 289
>gi|303234154|ref|ZP_07320800.1| putative membrane protein [Finegoldia magna BVS033A4]
gi|302494695|gb|EFL54455.1| putative membrane protein [Finegoldia magna BVS033A4]
Length = 302
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 91/291 (31%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + L+ + ++ R L + F ++ + +
Sbjct: 2 NNRTKGIIAILLSAFGFALMNLFIPLAGDLPTIQKSFFRNLIAFLVAFALLLKSNKKEEV 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ A++ YAL S + P ++ L VFLK
Sbjct: 62 KELHDVKSIPWKTLILRASLGTAGIFCNYYALDHLFISDASVLNKLAPFATLILSWVFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E L II+ L+ + +L + +L I + T +
Sbjct: 122 EDLRKEHIISILIAFVGVLFVVKPTLQIHEILPYLIGILGGICAGGAYTCVRKLNTLGVN 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++A + F + +F L LIG GL + K A S
Sbjct: 182 SSFIVAFFSGFSCLVCIPFMIFNFVPMGTSSILALIGVGLAALIGQFGITLAYKFAPASE 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +Y+ + + L Q D + I + ++ ++ +
Sbjct: 242 ISVFDYSTIIFTGLFGFLFLHQIPDYLSIIGYILIFSGALINFMNNRRKQR 292
>gi|330828235|ref|YP_004391187.1| RarD protein [Aeromonas veronii B565]
gi|328803371|gb|AEB48570.1| RarD protein [Aeromonas veronii B565]
Length = 296
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/291 (26%), Positives = 143/291 (49%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ +GT ++ILWG+ PLY QF+ +V++ E+ISHRVLWS+ + + +
Sbjct: 1 MKNWLGTGTATLSFILWGMLPLYYQFMPEVNMWELISHRVLWSVVLLGALFLLLGHQVPW 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + G+++ + ++++ W F + L T Q TS ++F+TP+ ++ +FLK
Sbjct: 61 ARLRSEPRQL-GLILLAGPVMSISWCMFTWCLTTGQVLTTSLAFFMTPLFNIVFAVIFLK 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL + +A L + L M G P SL + ++ Y +K I + ++E
Sbjct: 120 ERLTPQKHLAVALALAGLAYMLFCYGQLPWFSLIMGANFACYGLIKKKIHYDTGTSLYLE 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V AL + + G F G++ D L L+G +F Y + R ++STV
Sbjct: 180 AMVQLPVALIIIGTLAWYGEGAFVNGDLADKLLLMGSAPATLLPVGLFCYAVARTRMSTV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G+++Y P L + +++ + D ++ + F V ++V LLP +
Sbjct: 240 GLLQYIEPSLAFLLAIYWFGEAPDPIKAVGFAFVWAGLLVSLLPLHRLKRR 290
>gi|296110812|ref|YP_003621193.1| rarD protein [Leuconostoc kimchii IMSNU 11154]
gi|295832343|gb|ADG40224.1| rarD protein [Leuconostoc kimchii IMSNU 11154]
Length = 300
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/296 (20%), Positives = 144/296 (48%), Gaps = 7/296 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G F AY +WG+ ++ + L V ++ +++R++WSL + + +
Sbjct: 3 NKRLGITSGFAAYFIWGLLGVFWELLSVVPAMDTLAYRIVWSLVTISLVLTVQKSWPEVW 62
Query: 82 KDTLKNPKAVGMLV--FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + SA +++++W +I + +Q S SY++ P+++V + +FL
Sbjct: 63 HVIVTLIHNRKIGWIIMSAFLISINWFLYITMVTHQQATEASLSYYIMPLMNVAVAVIFL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L+ +IIA L+++ ++I+T+ +PL +L +A ++ Y +K +P+ ++ +
Sbjct: 123 HEKLSRSKIIALTLVVIGVIILTIQTGSLPLNTLLMAASFCFYGLIKKQVPLPATISLAL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E ++A AL Y+ T+ LI G++ +F+ K T
Sbjct: 183 ETVIVAPIALVYL----LLSPHVMTQDGSKITILLIMSGVITVIPLLLFAVANKNTDFIT 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++Y P + ++ +VF+L + + + IVF + ++V++ ++ ++ K K
Sbjct: 239 LSFIQYLNPTIQLLMAVFVLHEAFNWHKVIVFAFIWSGILVFIFGSLNSARKLKKA 294
>gi|227488550|ref|ZP_03918866.1| DMT superfamily drug/metabolite transporter [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091444|gb|EEI26756.1| DMT superfamily drug/metabolite transporter [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 295
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 129/278 (46%), Gaps = 4/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L Y LWG+ P Y LE +E+I+HR+ W+ + V L
Sbjct: 1 MLLGALCYFLWGLFPAYFPLLEPAGAVEIIAHRITWTAVLMDIVCVATGAHRELRA---L 57
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G+L + ++A +W +++A+ + + YF+ P+++V G ERL L
Sbjct: 58 RASQWGVLAVAGILVASNWLIYVFAVNSGHVAEAALGYFINPLVNVAFGMAIFGERLQPL 117
Query: 147 QIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +A + ++++ +T+ P L + +AVT++ Y +K + + S E VLA
Sbjct: 118 KKVAVGIATVAVVFITVAEGSFPFLGVGVAVTFALYGAVKKKVTISSVASVTAETAVLAP 177
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ ++V+ +G F L G++ +F ++R LST+G++++
Sbjct: 178 FAIAFLVYMEATGSGTFTGNGPGHAALLSTTGIVTGVPLLLFGTAVQRVSLSTMGMLQFI 237
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+P + ++ + + T R + F I+ +A+ +YL+
Sbjct: 238 SPTMQFFWALLVTHEEFSTTRWVGFFIIWVAIGMYLVS 275
>gi|322517288|ref|ZP_08070165.1| DMT superfamily drug/metabolite transporter [Streptococcus
vestibularis ATCC 49124]
gi|322124118|gb|EFX95657.1| DMT superfamily drug/metabolite transporter [Streptococcus
vestibularis ATCC 49124]
Length = 294
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/290 (20%), Positives = 130/290 (44%), Gaps = 5/290 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G LF +YI WG L+ + L VS S R+++++ + + + L
Sbjct: 6 QGLLFGLASYIQWGFLSLFWKLLAGVSAYNTFSWRIVFTVVTMLVYALIANQTTRFKGEL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ KA+ ++ ++ ++A +W +IYA+ Q S Y++ P++S+ VFL+E
Sbjct: 66 VGLWQDKKALLRMLLASFLIAANWLIYIYAVGHGQATQASLGYYIMPIVSILFALVFLRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ A +L + +L++ ++G + + K SS+ +
Sbjct: 126 SLSRSMWAAVVLAFIGVLVLVANTGKLPMVSLGLALSFGFYGLIKKGVRLSSDVAMLVES 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P + + F E F + + L G++ + FS +KRA L+ +G
Sbjct: 186 GLLLPFVAI--YLVFFSPEAFSSYSSMEMFLLAISGIVTAVPLLCFSEAVKRAPLNLIGF 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y P + ++ ++ I + + F + +A++V++ ++N K+
Sbjct: 244 IQYLNPTIQLLVAILIFGETVSFGELKGFLFIWVAILVFVTGQILNLRKS 293
>gi|89067738|ref|ZP_01155192.1| RarD [Oceanicola granulosus HTCC2516]
gi|89046708|gb|EAR52763.1| RarD [Oceanicola granulosus HTCC2516]
Length = 289
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/281 (27%), Positives = 138/281 (49%), Gaps = 9/281 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M L + A ++WG++PLY L+ V +EV++HR LWS F A++ L L
Sbjct: 1 MRAVLAIVTACVIWGLSPLYYALLDSVVPIEVLAHRTLWSFLF-FVAVIALQRRLRDLAA 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ P G+++ + + +W FI+A+ + + S Y+V P+ +V LG + E L
Sbjct: 60 AVATPSRAGLILAAGLAIGFNWFGFIFAIHSGRALEASLGYYVFPLFAVLLGRLVFGEAL 119
Query: 144 NHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+Q A L L++ ++T G P ++L +A +++ Y +K I +G E+ +
Sbjct: 120 TRVQWAAVGLAGLAVTVLTAGLGVPPFVALGLAASFAIYGALKKRIALGPILSVTAEVLL 179
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL ++ G + +P L L+ G L + +FSY +R + +TVG++
Sbjct: 180 LLPLALGFLAVFGHAQP-------LPTLLLLMLSGPLTATPLMLFSYAARRLRFATVGLV 232
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+Y P L + +V + +P I F I+ IA+ +Y
Sbjct: 233 QYLNPTLQFLVAVLVFTEPFTPWHAIAFPIIWIALALYSAS 273
>gi|332704299|ref|ZP_08424387.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
gi|332554448|gb|EGJ51492.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
Length = 298
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 96/293 (32%), Gaps = 12/293 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G +V A +LW + +++ + LEV R + + S +L
Sbjct: 2 QLKGYFYVILAAVLWALIGPVSRYAFEAGMPPLEVAFWRS------CLAWVFFASQARAL 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L F +A +G + A+ L S + P + ++L
Sbjct: 56 GQMRVARNDLPAVLAFGVVGIAGLFGSYAMAVRAGGAALASVLLYTAPAWVAVMSRLWLG 115
Query: 141 ERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
ERL+ +I A +L I+ + ++ G AI + G
Sbjct: 116 ERLSTPKIAAVVLTIVGVAGISLGPDWSGGKSFGVAAILFGLLSGITYALYYIFGKRYLG 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + AL + + + I+ G+K +
Sbjct: 176 RYSTPTLFLYALPVGALVVSPFFRFEAHPWQAWVAVAVLAFVSTYLAYSIYYAGLKHLEA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ PL+ + + F+ + + I +++ A+++ ++
Sbjct: 236 TRASVVATLEPLVASLLAFFLWDETFTPLGYIGAALILSAVLLTVVDGARRRR 288
>gi|294500468|ref|YP_003564168.1| hypothetical protein BMQ_3721 [Bacillus megaterium QM B1551]
gi|294350405|gb|ADE70734.1| putative membrane protein [Bacillus megaterium QM B1551]
Length = 315
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/290 (10%), Positives = 89/290 (30%), Gaps = 14/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
A +LW + + T+ L + + R + + + ++ K
Sbjct: 25 ISASVIAVLLWSTSFVGTKIAYTSFPPLTLGAARFVIAAVILGLILLIRKD-----KTKP 79
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
M + +++ + + P I+V + +F +++ +
Sbjct: 80 SFKDMGLMSMSGVLGTTLYFSLENIGVELTTASNAAIIVASYPAITVLMEFLFFRKKTSW 139
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFF 197
++ + + ++ + ++ + A A V
Sbjct: 140 VKALGIGVAMIGVYQISYSPETQTDDKQLIGNIILIVAGFIFALYNFTTRKVVKKYSMIT 199
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I A+ ++ L + F ++++G+++ S
Sbjct: 200 ISFYQTLAGAITFIPLAFIEKSSWQTPDIRSFLTLLYLGVFCSVIAFLLYNFGLRKLSSS 259
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + P+ ++ SV +L + + + I IV++ +V+ + T
Sbjct: 260 SAMTLMNLVPIFGVLFSVLLLHEVVGINQFIGGIIVLLGVVLSMRETRKK 309
>gi|218888127|ref|YP_002437448.1| hypothetical protein DvMF_3043 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218759081|gb|ACL09980.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 323
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 85/292 (29%), Gaps = 12/292 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G FV A LW + ++ E V+ LE+ R + + ++D
Sbjct: 5 GYGFVLLAAGLWALIGPLARYCLAEGVTPLEIAFWRATFGALFFGLHAARHGLWRAPVRD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
A F +A+ +G + A+ L S + P L + E L
Sbjct: 65 ------AATFAAFGLVGVALFFGSYQLAVREGGAALASILLYTAPAWVALLSRLCFAEPL 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ A L + ++ G + A F+
Sbjct: 119 TRAKLAALGLAMTGAFLICRSGGGLQGGASAAGIGFGLLAGFTYSLHYVFSRHFLHRHSP 178
Query: 204 AIPALFYVVWNGF----SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + L L + + + G++R + V
Sbjct: 179 VTLYLFCLPVGALALLPFVTFAPKGPLAWALLVLGMGLVTTYGAYMAYCEGMRRLSPTRV 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+L + + ++ + I G+V+ A+ +L K
Sbjct: 239 AVVANFEPVLAALLAYWLWDELFPPSGWIGAGLVIAAVFCVVLDGARGEDKR 290
>gi|294671413|ref|ZP_06736262.1| hypothetical protein NEIELOOT_03121 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306890|gb|EFE48133.1| hypothetical protein NEIELOOT_03121 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 299
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 4/295 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSG 76
++ T G L+ Y +WG+ PLY L ++++ R++WS + FS
Sbjct: 4 STDETRKGLLYALGCYAIWGLFPLYWYPLNHAPIGADQLLAQRIVWSAAFAVLFL-AFSR 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ PK + + SA +A++W +++A+ S YFV+P+ ++ LG
Sbjct: 63 QKADFFRAWGQPKTIALFAVSAFCIAMNWLIYLWAITNGHVLDASLGYFVSPLFNILLGR 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ E+LN Q A +L ++ +L + + G P ++L + ++ Y RK P+G+ G
Sbjct: 123 LVFGEKLNRRQAAAVVLAVVGILWLAVPVGQIPWVALLLTFSFGLYGLVRKLAPLGALPG 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+E ++ A Y+++ G GG F N+ T L+G G+ + +F+ +R
Sbjct: 183 LVLETLLMLPFAASYLLYAGRHGGLVFAELNLLQTALLVGSGIATTVPLILFASAARRIP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
LST+G+++Y +P L ++ + + + DT R I +G V + + +Y + K
Sbjct: 243 LSTLGVIQYGSPTLQLLLGLVLFGESFDTGRLIGYGWVWLGVALYFSGILQTGKK 297
>gi|54023751|ref|YP_117993.1| hypothetical protein nfa17830 [Nocardia farcinica IFM 10152]
gi|54015259|dbj|BAD56629.1| putative membrane protein [Nocardia farcinica IFM 10152]
Length = 320
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 68/282 (24%), Positives = 131/282 (46%), Gaps = 5/282 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G +F AY+ WG+ P + L +EV++ R+LW+L V + L
Sbjct: 19 GVVFGTSAYLAWGLFPAFFGLLAFTGAVEVLAQRILWTLVVVLVVLTLAGRLRELRGIDA 78
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + G+ ++ ++++WG ++Y + + + YFV P+++V G + +ERL
Sbjct: 79 RTWRLAGL---ASAAISINWGVYVYGVTSGHVVECALGYFVNPLVTVAFGVLIFRERLAV 135
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A L L++ ++T+ G P + +A +++ Y +K I + + G E + A
Sbjct: 136 AQWVALGLGALAVAVLTVDYGRPPVIALTLACSFALYGLVKKVIRLDALRGIAAEGLLSA 195
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL YV G G L LI G + +F+ +R LST+G+++Y
Sbjct: 196 PFALAYV-IAGLLTGTSALLTGPAHAALLIATGPVTLVPLLLFAVAAQRVPLSTMGLLQY 254
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P L + V + +P+ R F ++ +A+ V+ ++
Sbjct: 255 LTPALQMAWGVGVAHEPMPASRWAGFALIWLALAVFTADALV 296
>gi|296113109|ref|YP_003627047.1| RarD protein [Moraxella catarrhalis RH4]
gi|295920803|gb|ADG61154.1| RarD protein [Moraxella catarrhalis RH4]
Length = 295
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/290 (21%), Positives = 136/290 (46%), Gaps = 3/290 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G L V A+++WG PLY + L + +E+I HRV+W+ + +
Sbjct: 6 TTTPKGLLTVLSAFLIWGCFPLYFKELIEYDAIEIIVHRVVWTFVVLLGITIITRR-FRW 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K PK + + ++ ++A +W +++A+ Q S YF+ P++ V + K
Sbjct: 65 IDQIKKQPKWLFLTFLASILIATNWLVYVWAVTHDQVLEASLGYFIHPLVGVLFSMLIFK 124
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L +Q + LL ++ I + G+P +S+ + ++W Y ++ P + +G F+E
Sbjct: 125 EKLRLMQKLTVLLAAAAVGIQIVWMGGLPWVSMLLPLSWGLYGVIQRQTPFDTLDGLFLE 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L +L ++ ++ + F + L+ G + +++ K + +T+
Sbjct: 185 TALLVPISLIWLQFSHVASSSMAFWVSSEIW-LLMLAGPVTLVPLLLYNISTKLVQFNTL 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ Y P L+ + ++F +P D R +VF ++ + ++++ +
Sbjct: 244 SFLNYLTPSLIFLLAIFYYHEPFDAKRLLVFVLIWVGLLMFSADMFKHKK 293
>gi|257451441|ref|ZP_05616740.1| transporter [Fusobacterium sp. 3_1_5R]
gi|317058021|ref|ZP_07922506.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313683697|gb|EFS20532.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 294
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 101/288 (35%), Gaps = 7/288 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+++ + + + + + + + ++S+ E + R S F ++
Sbjct: 7 QKTKAVIYMLISALGFTMMSVAVKAIPEISLFEKVFFRNSISCFVAFLLLL------RDR 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + + + YA+ ++ ++P+ F ++LKE
Sbjct: 61 RGFYVKKENRLPVFIRSFLGFLGIVTNFYAIQYLLLADSNMLGKLSPITVSFFAVLYLKE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++ QI+ + L + S + ++A S +
Sbjct: 121 KVDKEQILGIAFSFIGALFVIKPSFSLSMLPSLAGLTSVTFAGISYTVIRYLNDKENPNI 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ +L V+ + F + ++ +L+ GL+ +Y K A+ S V +
Sbjct: 181 IVFYFSLMSVLCSIPFMLTDFQIPDLRQWFYLLSIGLMACLAQFFMTYSYKNAEASEVAV 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINS 308
Y+ I+ + + D I I+++ A+ +YL +
Sbjct: 241 YNYSGIPYGIILGYLLFDEIPDIYSCIGGVIIIVMAIYLYLHNKKKKA 288
>gi|83745739|ref|ZP_00942796.1| Transporter, drug/metabolite exporter family [Ralstonia
solanacearum UW551]
gi|83727429|gb|EAP74550.1| Transporter, drug/metabolite exporter family [Ralstonia
solanacearum UW551]
Length = 417
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 89/287 (31%), Gaps = 14/287 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G L + + +G ++T + + + +++ R + + + G+
Sbjct: 122 KLLGVLLIGVSAASFGAMAIFTHYAYASGANTVGLLAVRFCLAALALMVVMRVRRIGIPP 181
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G+ A F AL L + ++ P+ L +VFL
Sbjct: 182 WSR------VAGLAAMGGIGYAGQSFAFFTALHYAPASLVALLLYLYPMFVTVLAAVFLH 235
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVGSSE 194
ERL ++A +L + + +G+ S A + +
Sbjct: 236 ERLTPAALVALVLCSVGAGLTVGGAGLAGGSPLGVVLGVAAAVIYSVYITVGARVTRGVD 295
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ Y F L GL F G++R
Sbjct: 296 PIACTTVICTAAAVVYAGLAAAGVPARFPGSVAGWAASLAIAGLSTVIAILAFFAGLQRL 355
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ P++ +V + +L + I + +++ ++
Sbjct: 356 GAAQASMLSTLEPVVTVVLAALLLGESIGAAQMAGGALILAGVLWLT 402
>gi|312865308|ref|ZP_07725536.1| protein RarD [Streptococcus downei F0415]
gi|311099419|gb|EFQ57635.1| protein RarD [Streptococcus downei F0415]
Length = 303
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/296 (18%), Positives = 126/296 (42%), Gaps = 5/296 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGG 77
T G L AY+LW LY + L V+ S+R++W+ + ++
Sbjct: 2 TKTQKGLLLGVSAYLLWAFLSLYWKLLAGVNAYNTFSYRIIWTALTMLVYMLVSSNRQRY 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
LK+ + K + +A ++A++W +IYA+ +S Y++ P++SV L +
Sbjct: 62 GRELKELWLDKKQFYRAIGAAFLIAINWLTYIYAIANGHATGSSLGYYMMPLVSVLLALI 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE L +A L+ + + ++ +G + ++ F
Sbjct: 122 ILKESLTPATTLAVLVAAVGVGVLVWQTGHL--PSIALILAFSFGFYGLLKKGIKLSSDV 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + F +++ F E ++ + + L G++ + +++ +KRA L+
Sbjct: 180 AMLFEVGAILPFVLIYLIFFSQETLTDYSLWEDILLALSGIITAIPLLLYAESLKRAPLN 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
VG ++Y P + ++ ++ I + + + + +A+ ++++ +I K+
Sbjct: 240 LVGFIQYLNPTIQLLIALSIFGEKLSRGQLYGLIFIWLAIGLFVVGQIILMRKSSK 295
>gi|257466906|ref|ZP_05631217.1| transporter [Fusobacterium gonidiaformans ATCC 25563]
Length = 294
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 100/288 (34%), Gaps = 7/288 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+++ + + + + + + + ++S+ E + R S F ++
Sbjct: 7 QKTKAVIYMLISALGFTMMSVAVKAIPEISLFEKVFFRNSISCFVAFLLLL------RDR 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + + + YA+ ++ ++P+ F ++LKE
Sbjct: 61 RGFYVKKENRLPVFIRSFLGFLGIVTNFYAIQYLLLADSNMLGKLSPITVSFFAVLYLKE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++ QI+ + L + S + ++A S +
Sbjct: 121 KVDKEQILGIAFSFIGALFVIKPSFSLSMLPSLAGLTSVTFAGISYTVIRYLNDKENPNI 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ +L V+ + F + N+ +L+ GL+ +Y K A+ S V +
Sbjct: 181 IVFYFSLMSVLCSIPFMLTDFQVPNLRQWFYLLSIGLMACLAQFFMTYSYKNAEASEVAV 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINS 308
Y+ I+ + + D I I++ A+ +YL +
Sbjct: 241 YNYSGIPYGIILGYLLFDEIPDIYSCIGGVIIIAMAIYLYLHNKKKKA 288
>gi|254282716|ref|ZP_04957684.1| RarD protein [gamma proteobacterium NOR51-B]
gi|219678919|gb|EED35268.1| RarD protein [gamma proteobacterium NOR51-B]
Length = 329
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 5/284 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G A+ +WG LY + VS ++V++ R LW+LP V F ++ L
Sbjct: 30 RGICLSLTAHSIWGGAALYWMQTQPVSAVDVVAQRGLWTLPSVAFLLLLAGRLTGAL-AL 88
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+++ + + ++ + I++V+W FIYA+ + SF YF+ P+ +VF+G L ER
Sbjct: 89 IRDVRTIALMALTGAIISVNWLTFIYAVTHGRAAEASFGYFLIPLFTVFVGIFALGERPT 148
Query: 145 HLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L ++A L+++++L+ M G+PL+SL ++++++ Y RK I + +G F E +
Sbjct: 149 GLHLMAMGLVVVAILLQMVALGGLPLVSLGVSISFTLYSVVRKQIRADALQGLFWESIFI 208
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A +V G SG + FL+ G + + L+TVG++
Sbjct: 209 FCVAAPWVFLKGGSGLGEYGP---RVDWFLVLSGFFTAAPLLTQVAASRLLPLTTVGLLS 265
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P L ++ +V +L + I FGIV + + L +
Sbjct: 266 YLGPTLQLLVAVTLLGETISPTTIAAFGIVWVGLAAITLNNLRA 309
>gi|311741556|ref|ZP_07715380.1| DMT superfamily drug/metabolite transporter RarD [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303726|gb|EFQ79805.1| DMT superfamily drug/metabolite transporter RarD [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 289
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 78/284 (27%), Positives = 145/284 (51%), Gaps = 4/284 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L+ AYI+WG P + L S LE+++HRVLW+ V ++ + + +
Sbjct: 7 MLYTLAAYIMWGFFPAFFPLLLPASPLEILAHRVLWTAVLVTGFLLLGGRWREMARMDKR 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + V+WG ++ A+ + + YF+ P++SV LG VFLKERL
Sbjct: 67 TWGWLAA---AGVFITVNWGTYVVAINSNHVADAALGYFINPLVSVALGMVFLKERLRPW 123
Query: 147 QIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q A + +++L +T +G P +SL +A ++ Y +K + V S+ E V++
Sbjct: 124 QAGAVGVAAIAVLYLTFFTGQAPYISLLLAFSFGFYGLLKKQVRVSSAVSVAAEALVMSP 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ Y++W SG F + L L+ GL+ + F+ G + +LST+G+++Y
Sbjct: 184 LAVGYILWLETSGQGTFASEGVGHALLLVSAGLITALPLLCFAEGARTLRLSTIGMLQYL 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P++ ++ ++F+ + T R I FGI+ +A+ +Y+ V +
Sbjct: 244 TPIMQMLWALFVTHEHFSTHRWIGFGIIGVAVAIYVADLVRMAR 287
>gi|171059630|ref|YP_001791979.1| transporter DMT superfamily protein [Leptothrix cholodnii SP-6]
gi|170777075|gb|ACB35214.1| RarD protein, DMT superfamily transporter [Leptothrix cholodnii
SP-6]
Length = 295
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 2/287 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L+ AY LWG+ PLY + ++ LE+ +HRV+WSL + + + L
Sbjct: 2 RRGALYAAAAYTLWGLFPLYFALVSEIPALEITAHRVVWSLLFMLVLMGALRRH-AWLGP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L++ + + + S+ +LA++W +++A+ + S YF+ P+ +V LG + + E+L
Sbjct: 61 ALRDRRVLLAFLGSSALLALNWFIYVWAVTHGRVVEASLGYFINPLFNVLLGRLVMHEQL 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q A L L + +T H G P ++L +A ++ Y RK +G+ EG +E V
Sbjct: 121 RPAQWAAVALAALGVAWLTWHQGALPWIALGLAASFGTYGLLRKVATLGALEGLTLESLV 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
LA A ++W G+ G F +I L+ G L + F +R LS +G++
Sbjct: 181 LAPFAAAGLIWAGWHGQTGFQHADIGLQALLVSAGPLTAIPLLFFGAAAQRIPLSLLGML 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+Y P L ++ V+ +P R F ++ A V+ L + +
Sbjct: 241 QYIGPTLQLLIGVWFFNEPFAGARAQGFMLIWCACAVFSLEFWLRTR 287
>gi|329119142|ref|ZP_08247833.1| DMT superfamily drug/metabolite transporter [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464773|gb|EGF11067.1| DMT superfamily drug/metabolite transporter [Neisseria
bacilliformis ATCC BAA-1200]
Length = 302
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 133/289 (46%), Gaps = 4/289 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + Y +WG+ PLY L+ + ++++ RV+WS ++ + G +
Sbjct: 12 RRGLRYALGCYAVWGLFPLYWFPLKGAMPAEQMLAQRVVWSAVFALVLLLCYRQG-GAVL 70
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L+ P+ + S+ ++ V+W +++A+ S YF+ P+ +VFLG V LKER
Sbjct: 71 AVLRRPRLLAAFAASSFLIGVNWLVYLWAIANGHVLDASLGYFINPLFNVFLGFVVLKER 130
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L Q A L + +L + + +G P ++L +A ++ Y RK P+ + G +E
Sbjct: 131 LGAAQWAAIALALSGILWLAVPAGQVPWIALLLAGSFGCYGLIRKLAPLDALPGLALETF 190
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLNSFVFCIFSYGIKRAKLSTVG 260
+L A Y+ W SG F ++ + +F+ G KR LS +G
Sbjct: 191 LLLPLAAAYLAWCAHSGTLAGFGSLNALQNAVLLGSGAATTLPLLMFAAGAKRIPLSLLG 250
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I++Y +P + ++ + + + +D R + +V + + V+L
Sbjct: 251 ILQYFSPTIQLLLGLVLFGETLDGSRLAGYALVWLGVAVFLGGMWRQGR 299
>gi|260432080|ref|ZP_05786051.1| integral membrane protein DUF6 [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415908|gb|EEX09167.1| integral membrane protein DUF6 [Silicibacter lacuscaerulensis
ITI-1157]
Length = 312
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 93/292 (31%), Gaps = 7/292 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T+ G F F + ++ + L SVL++I L+S + I+
Sbjct: 2 STQNSTLQGLGFAFLGFAVFATHDALIKTLGGTYSVLQIIFFATLFSFVPMAVTILADKA 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L +++ + ++ YA F P+I L
Sbjct: 62 TGNFLPRHP------WLVMLRSGLMVTGMSCAFYAFSVLPLAEVYSLLFSFPLIVTVLSI 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L E + + A + ++ +LI+ + +A +A+C A ++ V
Sbjct: 116 PILGEVVRAQRWAAVGVGLIGVLIVLRPGATEITLGHLAALTAAFCSAFASVLVRKIGNE 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ P L + + + ++ + G+ + + + A
Sbjct: 176 ERSAVLILYPMLLAIAVMSLAQPAVYQPPSLIHLAMMALVGVFSVIAQHLIILAYRAAPA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V +Y+ + + + D + I++ + + + +
Sbjct: 236 GVVAPSQYSQIIWATIFGAVFFGEKPDKWVAVGAAIIIASGIFVVWRESRAN 287
>gi|297587377|ref|ZP_06946022.1| DMT superfamily drug/metabolite transporter [Finegoldia magna ATCC
53516]
gi|297575358|gb|EFH94077.1| DMT superfamily drug/metabolite transporter [Finegoldia magna ATCC
53516]
Length = 302
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 91/291 (31%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + L+ + ++ R L + F ++ + +
Sbjct: 2 NNRTKGIIAILLSAFGFALMNLFIPLAGDLPTIQKSFFRNLIAFLVAFALLLKSNKKEEV 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ A++ YAL S + P ++ L +FLK
Sbjct: 62 KELHDIKSIPWKTLILRASLGTAGIFCNYYALDHLFISDASVLNKLAPFATLILSWIFLK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E L II+ L+ + +L + +L I + T +
Sbjct: 122 EDLRKEHIISILIAFVGVLFVVKPTLQIQEILPYLIGILGGICAGGAYTCVRKLNTLGVN 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++A + F + +F L LIG GL + K A S
Sbjct: 182 SSFIVAFFSGFSSIVCIPFMIFNFVPMGTSSILALIGVGLAALIGQFGITLAYKFAPASE 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +Y+ + + L Q D + I + ++ ++ +
Sbjct: 242 ISVFDYSTIIFTGLFGFLFLHQIPDYLSIIGYILIFSGALINFMNNRRKQR 292
>gi|311106484|ref|YP_003979337.1| hypothetical protein AXYL_03302 [Achromobacter xylosoxidans A8]
gi|310761173|gb|ADP16622.1| hypothetical protein AXYL_03302 [Achromobacter xylosoxidans A8]
Length = 306
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 93/299 (31%), Gaps = 7/299 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G V ++ ++L + L+++ R L +LP V ++ G
Sbjct: 10 PQTQSAAAGIACVVGGIFFLTLSDANAKWLGAHYNPLQILFLRALIALPFVMALALWLGG 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I V F L T + F P+ L
Sbjct: 70 RRVLRTAHAG------LHLTRGAINVVSAYCFYLGLRTLPLAEATAIAFAAPLFVTALSV 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ LKER++ + +A L +LI+ + + +A + I
Sbjct: 124 LILKERVDGKRWLAVLAGFAGVLIVVRPGAATFQAATLLPLITAMLYGVMMITARGINRN 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ L +V + + + + D + L ++ + + G +
Sbjct: 184 EGMLTTTLYIVLGQLVCSAVALPLVWEQPAMADLPYFGAVALFSTLGLALITQGFRIGPA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S V +YT + V + D + + + V + K++T+K
Sbjct: 244 SVVAPFDYTGLIWATVLGWVFWHETPDAYAYLGALFIAGSGVYIAVREARAKSKSRTRK 302
>gi|322372397|ref|ZP_08046933.1| protein RarD [Streptococcus sp. C150]
gi|321277439|gb|EFX54508.1| protein RarD [Streptococcus sp. C150]
Length = 308
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 65/291 (22%), Positives = 138/291 (47%), Gaps = 7/291 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---L 81
G LF YI WG L+ + L VS S R+++++ + + L
Sbjct: 20 QGLLFGLATYIQWGFLSLFWKLLAGVSAYNTFSWRIVFTVVTMLGYALIAKQNTRFKVEL 79
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ KA+ ++ ++ ++A +W +IYA+ Q S Y++ P+IS+ +FL+E
Sbjct: 80 VELWQDKKALLRMLLASFLIAANWLIYIYAVGHGQATQASLGYYIMPIISILFALIFLRE 139
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ A L + +L++ L++G P++SL +A+++ Y +K + + S +E
Sbjct: 140 SLSRTMWAAVFLAFIGVLVLVLNTGKLPMVSLGLALSFGFYGLIKKGVKLSSDVAMLVES 199
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + Y+ F E F + + L G++ + FS +KRA L+ +G
Sbjct: 200 GFLLPFVVVYL---AFFSPESFSSYSSMEMFLLAISGVVTAVPLLCFSEAVKRAPLNLIG 256
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y P + ++ ++ I + + F + IA++V++ ++ ++
Sbjct: 257 FIQYLNPTIQLLVAILIFGETVTVGELKGFIFIWIAILVFVTGQLVTIRRS 307
>gi|270284584|ref|ZP_05966374.2| putative membrane protein [Bifidobacterium gallicum DSM 20093]
gi|270276488|gb|EFA22342.1| putative membrane protein [Bifidobacterium gallicum DSM 20093]
Length = 381
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 89/291 (30%), Gaps = 11/291 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ ++G L LWG+ ++ L + L + R L + +F +
Sbjct: 67 ASRVLVGCLMTLVGGTLWGLNGTVSKVLLDTYHATPLWMACVRELLAGA-MFLVVAALRE 125
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L L+ + T + + +++++ G + V+ ++ +
Sbjct: 126 PKQLKGALTTPRDYPHFLIATLTCVTLTQVAYLFSVHWTNGGTATVLQQVSLLMVLAYVC 185
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE-- 194
V + + +II L + ++ L + + A +
Sbjct: 186 VHGRRWPHAREIIGIALAFTGVFLLVTGGSFTSLHMPLPGLLWGMTDAFSAACLVIVPIS 245
Query: 195 -----GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G + + + + ++ L + F +F
Sbjct: 246 LINRWGNTVFNGITFMLSGLLLIPFAHPIAAMPQLDAKGWWMLAYSAICGTFLAFWLFMG 305
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
G++RA ++ P++ +S+V + +++I +VV
Sbjct: 306 GVERAGSMRTALLSTIEPVVATISTVLWVGTVFVPTDLFGIALILIMVVVM 356
>gi|89067237|ref|ZP_01154750.1| Putative transporter, RarD family, DMT superfamily protein
[Oceanicola granulosus HTCC2516]
gi|89046806|gb|EAR52860.1| Putative transporter, RarD family, DMT superfamily protein
[Oceanicola granulosus HTCC2516]
Length = 310
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 102/302 (33%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S +S T +G L A ++ + + + +++ E + R +LP V +
Sbjct: 1 MSAVPSSQRTALGVLLACSAVTVFTLMSAFVKAADRIPAGETMFFRSALALPVVLAWLFA 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + T A + S + G L F+ + ++
Sbjct: 61 TGGLKGGIATTNYRGHAARGIAGSLAMGLGFAGLKYLPLPEVTAIRFVTPVFLVVLAALM 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LG R++ + + ++I++ + G A+ SA A + V S
Sbjct: 121 LGERLRLVRISAVLVGLVGVVIITAPRFSAGLGSNAALGALLTLGSASLAALAQVFVKSM 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G ++ +L + + + + + ++L G GL+ + + +
Sbjct: 181 SGRETTAAIVFYFSLTAATLSLLTIPFGWVMPFGIEWVWLAGAGLVGGIGQILLTASYRH 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
A + Y + L IV F + G++++A V +L +
Sbjct: 241 ADAGVLAPFTYISMLWSIVIGYFWFGEVPTLPMLGGAGLIILAGVAIVLRERQLGLRTTA 300
Query: 314 KK 315
++
Sbjct: 301 ER 302
>gi|161524125|ref|YP_001579137.1| hypothetical protein Bmul_0949 [Burkholderia multivorans ATCC
17616]
gi|160341554|gb|ABX14640.1| protein of unknown function DUF6 transmembrane [Burkholderia
multivorans ATCC 17616]
Length = 397
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 87/285 (30%), Gaps = 16/285 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L+V + +G ++ ++ V VL ++ R +
Sbjct: 100 LQGALYVALSAAAFGAMAIFGRYAYAGGVDVLGLLIVRFAIGGTVLAAIA------WRRG 153
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ A + AL Q L + ++ P L + +L E
Sbjct: 154 VVWPRGRALMPLVAMGALGYVGQSFCYFTALRHAQASLVALLLYLYPAFVTLLAAWWLGE 213
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL + +A +L + +M +A+A+ + ++ G
Sbjct: 214 RLTRAKGVALVLCVAGSALMVGGGHGEPFGIALALGAAVVYSLYIVGGTKATRGVDPLAT 273
Query: 202 VLAIPA--------LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I + V F + L + F G++R
Sbjct: 274 TAIICVSATAALVLIALVRTVAFDAPPRWPATAGGWAAMLAIALVSTVAAMLAFFAGLER 333
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ ++ P++ + + + + + ++ ++ A++
Sbjct: 334 LGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVL 378
Score = 41.8 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 27/82 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 156 WPRGRALMPLVAMGALGYVGQSFCYFTALRHAQASLVALLLYLYPAFVTLLAAWWLGERL 215
Query: 283 DTVRTIVFGIVVIAMVVYLLPT 304
+ + + V + +
Sbjct: 216 TRAKGVALVLCVAGSALMVGGG 237
>gi|89894364|ref|YP_517851.1| hypothetical protein DSY1618 [Desulfitobacterium hafniense Y51]
gi|89333812|dbj|BAE83407.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 293
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 92/293 (31%), Gaps = 20/293 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L F +WG T + T+ L E ++ +E++ R + A +
Sbjct: 3 TRKELQGHLLAFMTIFIWGTTFISTKLLLESITPVEILFLRFAIGFLILLLAYPHRLRIR 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +++ AL ++P + +F
Sbjct: 63 E-------RKQDLYFAAAGLCGVTLYFLLENIALTYTFASNVGVIVAISPFFTALFAHLF 115
Query: 139 -LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----------WSAYCFARK 186
E+L I + ++ +++++ + L + +S
Sbjct: 116 LDTEKLRVRFFIGFSVAVVGIILISFNGSNNLQLNPLGDILAVLAAVVWAAYSVLTKKIS 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + + GF+ L ++ F
Sbjct: 176 GFHYNTIQATRRIFFYGLVFMIPALCILGFNPDITELTRPNNLFNILFLGLGASALCFVT 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ +K + Y P++ ++++V +L + I V + + + +++
Sbjct: 236 WNSAVKLLGAVKTSVYIYLVPVITVITAVIVLGEKITGVSVLGIVLTLTGLLI 288
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 14/134 (10%), Positives = 36/134 (26%), Gaps = 1/134 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+A E + A+ +++ D
Sbjct: 10 HLLAFMTIFIWGTTFISTKLLLESITPVEILFLRFAIGFLILLLAYPHRLRIRERKQDLY 69
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK-QPIDTVRTIVF 290
F + F + + + S VG++ +P + + L + + I F
Sbjct: 70 FAAAGLCGVTLYFLLENIALTYTFASNVGVIVAISPFFTALFAHLFLDTEKLRVRFFIGF 129
Query: 291 GIVVIAMVVYLLPT 304
+ V+ +++
Sbjct: 130 SVAVVGIILISFNG 143
>gi|320176751|gb|EFW51785.1| Protein rarD [Shigella dysenteriae CDC 74-1112]
Length = 268
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 76/266 (28%), Positives = 126/266 (47%), Gaps = 2/266 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + + S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQ-WS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK ++ P+ + ML SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 YLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L I +L+ G P+++L +A +++ Y RK I V + G I
Sbjct: 122 GERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L LI G++ + F+ R +LST
Sbjct: 182 ETMWLLPVAAIYLFAIADSSTSHMGQNPMLLNLLLIAAGIVTTVPLLCFTAAATRLRLST 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDT 284
+G +Y P LM + +V +
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEKPGA 267
Score = 36.0 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 13/128 (10%), Positives = 39/128 (30%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
+ A + + V + E + + + + L
Sbjct: 18 FIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLA 77
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+L + +F + + + + + PL+ IV + L + ++ + + +
Sbjct: 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAI 137
Query: 295 IAMVVYLL 302
++V L
Sbjct: 138 CGVLVQLW 145
>gi|172054988|ref|YP_001806315.1| hypothetical protein cce_4903 [Cyanothece sp. ATCC 51142]
gi|171701269|gb|ACB54249.1| DUF6-containing protein [Cyanothece sp. ATCC 51142]
Length = 289
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 101/286 (35%), Gaps = 8/286 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G F+ A + + ++ + + + ++ R L+ L + + +
Sbjct: 5 QSIQRGAFFIITAELSFALSAALIKLVSDSLPNESIVFFRNLFGLFVLIPLLFNAGHKI- 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +F + I F Y+L + P+I F+ +L
Sbjct: 64 ------LQTNRIHLHLFRSGIGMGAMYCFFYSLAHLPLADSMLIKSTIPLIIPFIALAWL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE L+ I+A LL + ++ G ++ S+ A + V
Sbjct: 118 KENLSRRIIVAGLLGFFGVFLILKPDGNNTNWASLVALGSSLMAALAFVTVRQLSSTEPP 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++A A+ + + + + + L+G GL + + + G + A S+V
Sbjct: 178 LRIVAYFAIVGLSISAVPLTWTWQTPTLGQCILLLGVGLTTTIGQLLLTRGYQNAPASSV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
GI YT+ ++ ++ + ++V A V+ L +
Sbjct: 238 GIFTYTSVPFGTFLGWLFWQELLEPKFYLGAILIVFAGVLVLKNQL 283
>gi|254510843|ref|ZP_05122910.1| hypothetical protein RKLH11_1378 [Rhodobacteraceae bacterium KLH11]
gi|221534554|gb|EEE37542.1| hypothetical protein RKLH11_1378 [Rhodobacteraceae bacterium KLH11]
Length = 312
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 98/292 (33%), Gaps = 7/292 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+A T+ G F F + ++ + + L SVL++I L+S + I+
Sbjct: 2 SAQNTTLRGLGFAFLGFAVFATHDVLIKVLGSTYSVLQIIFFATLFSFVPMAVTILTDRT 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L +++ + ++ YA F P+I L
Sbjct: 62 TGNFLPRHP------WLILLRSALMITAMSCAFYAFSVLPLAEVYSLLFSFPLIVTVLSI 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L E + + A + ++ +LI+ + +A +A+C A ++ V
Sbjct: 116 PVLGEVVRAQRWAAVGVGLIGVLIVLRPGATDITLGHLAALMAAFCSAFASVLVRKIGNE 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ P L +V + + ++ + G+ + + + A
Sbjct: 176 ERSAVLILYPMLLAIVVMSIAQPAVYQPPSLLHLAMMALVGVFSVIAQHLIILAYRAAPA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ +Y+ + + V + D I I++ + V + ++
Sbjct: 236 GVIAPSQYSQIIWATIFGVIFFGEHPDAWVAIGASIIIASGVFVVWRESRSN 287
>gi|152979218|ref|YP_001344847.1| transporter DMT superfamily protein [Actinobacillus succinogenes
130Z]
gi|150840941|gb|ABR74912.1| RarD protein, DMT superfamily transporter [Actinobacillus
succinogenes 130Z]
Length = 296
Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + F Y WG PLY L + ++++ R++WS F + F G ++
Sbjct: 6 KPKGWHYAFLCYATWGTFPLYWYPLNHSAMPAEQILAQRIVWSAVFAVFLLFVFKQGRAV 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L K P+ + + + SA ++A++W +++A++ R S YF+ P+ +VFLG + K
Sbjct: 66 LHAF-KQPRILAVFLTSAFLIALNWLVYLWAIVNRHVLDASLGYFINPLFNVFLGWLVFK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+LN Q++A +L + + +G P ++L +A ++ Y RK P+ + G +E
Sbjct: 125 EKLNKAQLLALASATAGILWLAVPAGQIPWVALLLAGSFGFYALIRKLAPMEALAGLALE 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L+ AL Y+ + F + L+G G + F+ G ++ +S +
Sbjct: 185 TLLLSPFALGYLAFCAMQNNLVFSQLDNLQLAVLLGSGAATTIPLLWFAMGARQISMSLL 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G+++Y +P L + +L + + T R I + +V I + ++L + +
Sbjct: 245 GMLQYISPSLQFLCGFLLLGEKLSTERLIGYILVWIGVAIFLWAMRAKAKR 295
>gi|326692760|ref|ZP_08229765.1| rarD protein [Leuconostoc argentinum KCTC 3773]
Length = 305
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 65/289 (22%), Positives = 145/289 (50%), Gaps = 7/289 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T +G AY+ WGI ++ + L V L+ +++R++WSL +F +++ + ++
Sbjct: 3 NTRVGVTSGLLAYVFWGILGIFWELLHAVPALDTLAYRIVWSLVTIFVVLLFQNSWRTVW 62
Query: 82 KDTLKNPKAVG--MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + ++ S ++ V+W +IY + Q S Y++ P+++V + +FL
Sbjct: 63 QTIVTLTQNRKILWIMLSGLLITVNWYIYIYMVTHNQATEASLGYYMMPLMNVAIAVLFL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERL+ ++IA LL+++ ++++T +G PL +L +A ++ Y +K +P+ ++ +
Sbjct: 123 HERLSPAKMIALLLVVIGVVLLTKQTGALPLSTLLMAASFCLYSLIKKQVPLPATISLAL 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E +A A Y+ T +I G + +F+ K + T
Sbjct: 183 ETLCVAPFAAIYL----LLSPHILTQNGPTVTGLIIASGAVTVVPLALFAVATKNTQFMT 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+G ++Y P + ++ +VF+L +P+ + +VF + + V++L +V
Sbjct: 239 LGFIQYLNPTMQLLVAVFVLHEPLSWHKIVVFVFIWAGIAVFVLESVYQ 287
>gi|312114496|ref|YP_004012092.1| RarD protein, DMT superfamily transporter [Rhodomicrobium vannielii
ATCC 17100]
gi|311219625|gb|ADP70993.1| RarD protein, DMT superfamily transporter [Rhodomicrobium vannielii
ATCC 17100]
Length = 293
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/285 (27%), Positives = 145/285 (50%), Gaps = 3/285 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M G F Y +WG+ PLY L+ S LE+++ R+LWSL + ++ +L++
Sbjct: 3 MHGLGFALATYFIWGLLPLYLALLKPASALEILAQRILWSLVFLLAWLLLSGHLRALMRR 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + VG+ +A +++++WG +I A+ T + S YF+ P+++V +G + L ERL
Sbjct: 63 --LDLRLVGLYALAAVLISINWGVYILAVTTNRTVEASLGYFILPIVNVIIGRIALGERL 120
Query: 144 NHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +Q L + + L +P ++ +A+++ Y +KT P+ ++EG F+E +
Sbjct: 121 SSVQAAGVLTAAAGVTYLCLGAQSVPWIAFTLALSFGFYGLIKKTAPLPAAEGLFLETAI 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
LA+PA + G G G + L L G G++ F+ KR LST+G++
Sbjct: 181 LALPAAVLLWIMGMRGELAMLHGPVSLDLLLAGSGMVTVVPLITFALAAKRVPLSTIGML 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y AP L + VF+ + + + F I+ ++VYL
Sbjct: 241 QYLAPTLQFLIGVFVFGELLTEAKLAGFAIIWCGLIVYLYGLARR 285
>gi|266624324|ref|ZP_06117259.1| putative membrane protein [Clostridium hathewayi DSM 13479]
gi|288863825|gb|EFC96123.1| putative membrane protein [Clostridium hathewayi DSM 13479]
Length = 312
Score = 87.3 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 97/293 (33%), Gaps = 15/293 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+S ++ ++ + + I+WG + + ++ +S +++ R + +
Sbjct: 1 MSTKDGKGIKLLAAIGLIITTIIWGSAFVVMKNSVDIISPTYLLALRFTIAAIALILVFW 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K N + L V + F Y L +F + ++
Sbjct: 61 --------RKVMKINKSDLLCGGLLGVFLFVSYFFQTYGLKYTTASKNAFITTLYVILVP 112
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
FL +F ++ IIAA + ++ L +++L + + + + +A + +
Sbjct: 113 FLHWLFNHKKPKRNNIIAACIAVVGLALLSLEGDLSINIGDLLTLICGFFYAIHIVFIDR 172
Query: 193 SE------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ V+A + + + + N L F +
Sbjct: 173 YTEDHDPVKMTVLQMVVAAVLSWIIAPVLEGPFDGRVIDNSMIISLLYLGIFSTMIGFLL 232
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G K +T I+ + ++ SV L P+ ++ A+++
Sbjct: 233 QNVGQKYLTPNTSSILLSFESVFGLIFSVIFLGDPLTIRLMAGCALMFAAVIL 285
>gi|228478325|ref|ZP_04062933.1| RarD protein [Streptococcus salivarius SK126]
gi|228250004|gb|EEK09274.1| RarD protein [Streptococcus salivarius SK126]
Length = 294
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/291 (19%), Positives = 135/291 (46%), Gaps = 7/291 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS---GGLSLL 81
G LF YI WG L+ + L VS S R+++++ + + L
Sbjct: 6 QGLLFGLATYIQWGFLSLFWKLLAGVSAYNTFSWRIVFTVVTMLVYALVAKQNARFKDEL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ K ++ ++ ++A +W +IYA+ Q S Y++ P++S+ +FL+E
Sbjct: 66 VELWQDKKVFLRMLLASFLIAANWLIYIYAVGHGQATQASLGYYIMPIVSILFALIFLRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ A +L + +L++ +++G P++SL +A+++ Y +K + + S +E
Sbjct: 126 SLSRTMWAAVVLAFIGVLVLVVNTGKLPMVSLGLALSFGFYGLIKKGVKLSSDVAMLVES 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L Y+++ + + G++ + FS +KRA L+ +G
Sbjct: 186 GLLLPFVAIYLIFFSPESFSSYSSMEMFLL---AISGVVTAVPLLCFSEAVKRAPLNLIG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y P + ++ ++ I + + F + IA++V++ ++ ++
Sbjct: 243 FIQYLNPTIQLLVAILIFGETVSFGELKGFLFIWIAILVFVTGQIVTFRRS 293
>gi|239909189|ref|YP_002955931.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
gi|239799056|dbj|BAH78045.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
Length = 293
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 89/290 (30%), Gaps = 9/290 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L+V A LWG+ ++ + +EV R + L
Sbjct: 1 MSGYLYVLGAAALWGLIGPLSKLSFAAGMDTVEVAFWRTTLAWFFFAA------QALRAR 54
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + F +A +G ++ A+ L S + P + +FLKE
Sbjct: 55 ETRIAPRDLPAVAGFGVAGIAGLFGAYVVAVEAGGAALASVLLYTAPAWVAVMSWLFLKE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-FIEM 200
+ +I A I+ + ++ G ++ + +
Sbjct: 115 PMGGYKIAAVAATIVGVAGVSCGDGTSAVNGRAIFFGLLSGVTYALYYIFGKYYLGRYKT 174
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + AL ++ + ++ G+KR + +
Sbjct: 175 PTLFLYALPVGSLTLLPFVHFTRPTLAGALPCIVLALCSTYGAYSLYYAGLKRLEATRAA 234
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ P++ + + + + V + +++ +++ + +
Sbjct: 235 VVATLEPVMAAILAYALFGERFGVVGYLGSALIIASVLATIWDGARERLR 284
>gi|260574143|ref|ZP_05842148.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
gi|259023609|gb|EEW26900.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
Length = 323
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 93/289 (32%), Gaps = 7/289 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G L A+ ++ + +FL S +++I VL+S P V F ++
Sbjct: 3 HAKSNLRGALMALTAFAVFATHDVVVKFLGGTYSAVQIIFFSVLFSFPLVTFMLM----- 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ D P V YA T F P++ L
Sbjct: 58 -NDRSDGHLRPVHPWWTAVRTVCTVVTGVTAFYAFSKLPLAQTYAILFAAPLLITLLAIP 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ + +A ++ + ++I+ PL A +A + ++ V
Sbjct: 117 VLGEKVGIRRGLAVVVGLAGVMIVLRPGAAPLTLGHAAALTAAVASSLASVIVRKIGKDE 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ +L P + V G + + + L + + A+
Sbjct: 177 RAVVLLLYPMMANFVVLGAALPFVYRPMPVAHIGMLGVIAAFGFVAMLLIIDAYRSAEAV 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
V M+Y+ + V I + D +++ + + +L
Sbjct: 237 IVAPMQYSQMVWAAVFGALIFNENPDAYTLAGAAVIIASGLYIVLREDR 285
>gi|293605587|ref|ZP_06687967.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815967|gb|EFF75068.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 302
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 91/298 (30%), Gaps = 8/298 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G V ++ ++L + L+++ R L +LP V ++ G
Sbjct: 12 EHSAFAGIACVVGGIFFLTLSDANAKWLGAHYNPLQILFLRALIALPFVTALALWLGGRR 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + I V F L + F P+ L +
Sbjct: 72 VIRTAHPG------LHLLRGAINVVSACCFYLGLRALPLAEATAITFAAPLFVTALSVLI 125
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKER++ + +A L +LI+ + + +A +A I
Sbjct: 126 LKERVDGKRWLAVLAGFAGVLIVVRPGSDAFQAATLYPLTTALLYAVMMITARGISRGEG 185
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L +V + + + G L ++ + + G + S
Sbjct: 186 MLTTTFYIVLGQLVCSAVGLPWVWQAPATEHLPYFFGIALFSTLGLALITQGFRIGPASV 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
V +YT + + ++ D + +++ VY+ + + K+
Sbjct: 246 VAPFDYTGLIWATILGWIFWREAPDAYAYLG-ALIIAGSGVYIAVREARAKSRRRAKA 302
>gi|117620208|ref|YP_858182.1| RarD protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117561615|gb|ABK38563.1| RarD protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 300
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 76/290 (26%), Positives = 140/290 (48%), Gaps = 2/290 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ MGT +++LWG+ PLY QF+ V++ E++SHRVLWS + + +
Sbjct: 1 MKNWMGTGSAALSFVLWGMLPLYYQFMPAVNMWELLSHRVLWSAVLLGLLFLLIGYRVPW 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + +++ + ++++ W F + L T Q TS ++F+TP+ ++ +FLK
Sbjct: 61 ARLRSEPRQLG-LILLAGPVMSISWCMFTWCLTTGQVLATSLAFFMTPLFNIVFAVLFLK 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L + +A L + L M G P SL + ++ Y +K + + ++E
Sbjct: 120 EKLTPQKHLAVALALAGLAYMLFSYGQLPWFSLIMGANFALYGLLKKKVHYDAGVSLYLE 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V AL + SG F G+ + L L+G +F YG+ R ++STV
Sbjct: 180 ALVQLPVALLIIGALAVSGASQFVAGDWTERLLLMGSAPATLLPVGLFCYGMMRTRMSTV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G+++Y P L + ++F + D V+++ F V ++V LLP
Sbjct: 240 GLLQYIEPSLAFLLAIFWFGETPDPVKSVGFAFVWAGLLVSLLPLHKLRR 289
>gi|296271567|ref|YP_003654198.1| hypothetical protein Arnit_0022 [Arcobacter nitrofigilis DSM 7299]
gi|296095742|gb|ADG91692.1| protein of unknown function DUF6 transmembrane [Arcobacter
nitrofigilis DSM 7299]
Length = 321
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/303 (11%), Positives = 103/303 (33%), Gaps = 17/303 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++G + A +WG + + + ++ + V+ R+ + + I
Sbjct: 25 NLIGIFSLIFAMFIWGSSFVALKIAMQDLGEFTVLFFRMFIASLCFVYFI------KRFS 78
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + ML+ ++++ F I AL + P+I+ FLKE
Sbjct: 79 KYSFEKSDIKYMLMLCIFEPSLYFIFEIKALTYTSVSQAGMITSLMPIITAMGAGYFLKE 138
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTIPVG 191
++ + +++ ++ + +++ + + V +AY + +
Sbjct: 139 LVSRQLLFGSVIAMIGAIWLSVQGSVTFGAPNPMLGNFLELCAMVCGAAYTILARHLIEK 198
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + A F+ + + ++ + +++Y +
Sbjct: 199 YPALFITAIQAFAGAIFFFPFFIYEYMTRDINFTQNSVLSLIYLGVVVTLAGYGLYNYAL 258
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + S + P+ ++ + FILK+ + I ++ +++ + K
Sbjct: 259 TKIEASKAAMYINLIPIFTMILAFFILKEELSVEELIASATILSGVIISQVSVKRFRRKR 318
Query: 312 KTK 314
K
Sbjct: 319 KIA 321
>gi|288962914|ref|YP_003453208.1| permease of the drug/metabolite transporter superfamily
[Azospirillum sp. B510]
gi|288915180|dbj|BAI76664.1| permease of the drug/metabolite transporter superfamily
[Azospirillum sp. B510]
Length = 312
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/288 (16%), Positives = 93/288 (32%), Gaps = 6/288 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T +G + + + + + + + L V EV+ R L++L V +I L
Sbjct: 17 NTPLGIGSMLMSVLFFSLMNVLAKLLMDRFPVTEVMFFRSLFALVPVCLSI-----HLGS 71
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
T + + + I ++ F P+ L L
Sbjct: 72 GFATTLRTRYPWGHMGRSLIGLTTMVAMFWSFHLLPLGDAIALNFAAPLFLTALSVPLLS 131
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ + A L+ +LI+ SG L AI A A I +
Sbjct: 132 EKVGIHRWSAVLVGFAGVLIIVRPSGDVLNLGAIVALCGALTNALAMIAIRQLSRTEPPD 191
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ L + G + + + L+ GLL + + A + V
Sbjct: 192 TIVFYFTLLTTILLGLALPFSWVTPDPMGWFLLLATGLLGGCGQLMLTRAYSLAPAAVVA 251
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ YT+ LL + F+ + T + +V+ + + L S
Sbjct: 252 PLNYTSLLLAVTFGWFLWGEVPTTTMAVGAAVVMASGLYILHRETRRS 299
>gi|85373398|ref|YP_457460.1| rarD protein [Erythrobacter litoralis HTCC2594]
gi|84786481|gb|ABC62663.1| rarD protein [Erythrobacter litoralis HTCC2594]
Length = 304
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 140/289 (48%), Gaps = 2/289 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P G AYI+WG PLY + V E++ R++W+LP ++ L
Sbjct: 7 PQPSGLPAALGAYIIWGFLPLYLIIVSAVPPFELVGWRIIWTLPVCVLIVLV-RRQWPEL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L N + + +L+ S+ ++A +W + +A+ +Q + S Y++ P+++V LG++ L+E
Sbjct: 66 RAALGNRRVLLVLLGSSALIATNWFVYTWAIYEKQVYAASLGYYINPLLNVLLGTLVLRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+L+ Q +A L + + ++ +SL +A ++ Y RK +PVGS G IE
Sbjct: 126 KLSRAQWLAVGLAAIGVAVLATGALTTLWISLTLAFSFGTYGLLRKQVPVGSLPGLTIES 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L +PA W + G F + +++ G+ + +F+ KR S +G
Sbjct: 186 ALLLLPACGIAAWYAGTPGGSSFGVTPWLSFWIMMGGVFTAIPLLMFAVAAKRMDYSQLG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+++ AP ++ V + + +Q + + I F + A+ +++ S
Sbjct: 246 FIQFLAPSIVFVLGLTVFRQELLLAQAICFAFIWTALAIFVWDMWAKSR 294
>gi|332968639|gb|EGK07693.1| DMT superfamily drug/metabolite transporter [Kingella kingae ATCC
23330]
Length = 300
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 67/295 (22%), Positives = 141/295 (47%), Gaps = 4/295 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T G + Y+LWG PL+ + + ++V++ RV WS ++ F
Sbjct: 4 QTSETQKGIIGALACYLLWGAFPLFWYPINQSDMPSMQVLAQRVAWSAVFAVACMLVFKQ 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ PK + S+ ++ +W +++A+L S YF+ P+++V +G
Sbjct: 64 T-QTVWQAVRQPKILLTFCASSLLIGSNWLIYLWAILNNHVVDASLGYFLNPLVNVLIGF 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ L E+LN +Q + +L ++ + + +G P ++L++A ++S Y RK P+ + G
Sbjct: 123 LVLHEKLNKMQAASLILAASGIVWLAIPAGQIPWVALSLAASFSLYALIRKLAPMPALAG 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+E +L AL Y+ + + +F N T ++ G+ + +F+ KR
Sbjct: 183 LTLETLLLLPFALAYLGYCAWQNQLYFGQLNSLQTSIIVLSGVATTIPLLLFASSAKRIS 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
LS +G+++Y +P L + + + ++ R +G+V + V+L T + K
Sbjct: 243 LSLLGMLQYVSPTLQFALGLMLFGETLNASRLAGYGLVWCGVAVFLWGTWLAGRK 297
>gi|317489032|ref|ZP_07947559.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
gi|316911899|gb|EFV33481.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
Length = 305
Score = 87.3 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 80/291 (27%), Gaps = 16/291 (5%)
Query: 33 AYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A +WG+ + + +++ ++ R + + ++ L K
Sbjct: 2 AAAIWGLGTVVIKSTVDEFPPAWLVGVRFTVAGIILGIVMLPRFRKALDLDHLKK----- 56
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
L + + L ++F + VI FLG R I AA
Sbjct: 57 --GAILGAFLFLSYWANSTGLTDTTASNSAFLTSLYCVIIPFLGWALRGPRPTRFNIAAA 114
Query: 152 LLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L+ + + ++ G + L+ + K + ++
Sbjct: 115 LVCVAGVGCVSFAGLSGFSLRFGDLITLLSAFFLSLHVLYTAKYARGRDMTLLTVVQFLV 174
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A F LG + + ++ + + +
Sbjct: 175 AGVLGFGAGLAFEPMPAFASLGLDTWVSLGYLAVFASCIALLLQNFAVAHVDPAPASLFL 234
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T + + SV L + + F ++ +V+ + K + +
Sbjct: 235 ATESVFGVTFSVLFLGEILTGPLFAGFALIFAGIVISEYLPLRAEKKRRAR 285
>gi|55820554|ref|YP_138996.1| chloramphenicol-sensitivity protein (RarD) family protein
[Streptococcus thermophilus LMG 18311]
gi|55822445|ref|YP_140886.1| membrane protein [Streptococcus thermophilus CNRZ1066]
gi|55736539|gb|AAV60181.1| chloramphenicol-sensitivity protein (RarD) family protein
[Streptococcus thermophilus LMG 18311]
gi|55738430|gb|AAV62071.1| membrane protein [Streptococcus thermophilus CNRZ1066]
Length = 309
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/290 (18%), Positives = 125/290 (43%), Gaps = 5/290 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS---GGLSLL 81
G LF YI WG L+ + L VS + S R+++++ + + L
Sbjct: 21 QGLLFGLATYIQWGFLSLFWKLLAGVSAYNIFSWRIVFTVVTMLTYALVAKQNTRFKKEL 80
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ KA+ ++ ++ +A +W +IYA+ Q S Y++ P++S+ +FL+E
Sbjct: 81 VELWQDKKALLRMLLASFFIAANWLIYIYAVGHGQATQASLGYYILPIVSILFALIFLRE 140
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ A +L + +L++ ++G + + K SS+ +
Sbjct: 141 SLSRTMWAAVVLAFIGVLVLIANTGKLPMVSLGLALSFGFYSLIKKGVRISSDVAMLVES 200
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P + + + L G++ + FS +KRA L+ +G
Sbjct: 201 GLLLPFVAIYLVFFSPESFSSYSSME--MFLLAISGVVTAVPLLCFSEAVKRAPLNLIGF 258
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y +P + ++ ++ I + + F + +A++V++ ++ ++
Sbjct: 259 IQYLSPTIQLLVAILIFGETVSFGELKGFFFIWMAILVFVTGQIVTFRRS 308
>gi|255325318|ref|ZP_05366424.1| RarD protein [Corynebacterium tuberculostearicum SK141]
gi|255297883|gb|EET77194.1| RarD protein [Corynebacterium tuberculostearicum SK141]
Length = 289
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 78/284 (27%), Positives = 145/284 (51%), Gaps = 4/284 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L+ AYI+WG P + L S LE+++HRVLW+ V ++ + + +
Sbjct: 7 MLYTLAAYIMWGFFPAFFPLLLPASPLEILAHRVLWTAVLVTGFLILGGRWREMARMGKR 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + V+WG ++ A+ + + YF+ P++SV LG VFLKERL
Sbjct: 67 TWGWLAA---AGVFITVNWGTYVVAINSNHVADAALGYFINPLVSVALGMVFLKERLRPW 123
Query: 147 QIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
Q A + +++L +T +G P +SL +A ++ Y +K + V S+ E V++
Sbjct: 124 QAGAVGVAAIAVLYLTFFTGQAPYISLLLAFSFGFYGLLKKQVRVSSAVSVAAEALVMSP 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ Y++W SG F + L L+ GL+ + F+ G + +LST+G+++Y
Sbjct: 184 LAVGYILWLETSGQGTFASEGVGHALLLVSAGLITALPLLCFAEGARTLRLSTIGMLQYL 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P++ ++ ++F+ + T R I FGI+ +A+ +Y+ V +
Sbjct: 244 TPIMQMLWALFVTHEHFSTHRWIGFGIIGVAVAIYVADLVRMAR 287
>gi|312864288|ref|ZP_07724522.1| protein RarD [Streptococcus vestibularis F0396]
gi|311100289|gb|EFQ58498.1| protein RarD [Streptococcus vestibularis F0396]
Length = 294
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 136/291 (46%), Gaps = 7/291 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G LF F +YI WG L+ + L VS S R+++++ + + + L
Sbjct: 6 QGLLFGFASYIQWGFLSLFWKLLAGVSAYNTFSWRIVFTVVTMLVYALIANQTTRFKGEL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ KA+ + ++ ++A +W +IYA+ Q S Y++ P++S+ VFL+E
Sbjct: 66 VGLWQDKKALLRMFLASFLIAANWLIYIYAVGHGQATQASLGYYIMPIVSILFALVFLRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ +A +L + +L++ +++G P++SL +A+++ Y +K + + S +E
Sbjct: 126 SLSRSMWVAVVLAFIGVLVLVVNTGKLPIISLGLALSFGFYGLIKKGVKLSSDVSMLVES 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L Y+++ + + FS +KRA L+ +G
Sbjct: 186 GLLLPFVAIYLIFFSPESFSSYSSLEMFLLAISGIVTA---VPLLCFSEAVKRAPLNLIG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y P + ++ ++ I + + F + ++++V++ ++N K+
Sbjct: 243 FIQYLNPTIQLLVAILIFGETVSFGELKGFLFIWVSILVFVTGQILNLRKS 293
>gi|329961808|ref|ZP_08299822.1| putative membrane protein [Bacteroides fluxus YIT 12057]
gi|328531248|gb|EGF58092.1| putative membrane protein [Bacteroides fluxus YIT 12057]
Length = 312
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 98/302 (32%), Gaps = 15/302 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A +G+ PL+ L E + V+ R L+++P + + L
Sbjct: 4 KVKGYILGTIAAATYGMNPLFALPLYKEGMDPDSVLFFRYLFAIPILGIMLKTRGRNFKL 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++A+ + + + S FV P++ + +V K
Sbjct: 64 KRKEILPLII------LGWLVAISSLTLFQSYNYMEAGIASTILFVYPILVALIMAVAFK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGSS 193
E++ L + + ++ L +A A++++ Y +
Sbjct: 118 EKITLQTTFCIFLALSGIGLLYKGGDGATLSLVGVSLVMASALSYAIYIVGVNRPMLKDV 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ VL ++V F H + + F + I+
Sbjct: 178 ATLKVTFYVLLFGLSLFLVRVDFGQSLHVVDKWYLWGNLIALAVFPTAISFLCTTQAIQY 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ I+ P+ + V + + + ++++A+ + + I S +
Sbjct: 238 IGSTPTAILGALEPVTAVFFGVTVFGESLTPRLCCGIVLIILAVTFIIAGSNITSHLVRF 297
Query: 314 KK 315
+K
Sbjct: 298 RK 299
>gi|182412762|ref|YP_001817828.1| transporter DMT superfamily protein [Opitutus terrae PB90-1]
gi|177839976|gb|ACB74228.1| RarD protein, DMT superfamily transporter [Opitutus terrae PB90-1]
Length = 301
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 75/275 (27%), Positives = 133/275 (48%), Gaps = 2/275 (0%)
Query: 37 WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
WG+ PLY L ++ LE+I+HR L SL V + G S L++ A+ +
Sbjct: 24 WGLFPLYWTQLGAINALELIAHRHLSSLVFVLAIM-AVGPGWSEFLAALRSGTALRWHLA 82
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI-I 155
S +L +W F++ + +S YF+ P+++V G L E L LQ +A +
Sbjct: 83 SGLLLTANWLVFVWGVNHGYVLESSLGYFLVPLVNVAFGRFLLHEHLRRLQWLAIACASL 142
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
LL++ +P ++LA+A T+ Y RK P+G G +E +LA AL +VVW
Sbjct: 143 GVLLLLLRAGRLPWIALALAATFGFYGLLRKRSPLGPLVGLGVETLLLAPLALAFVVWQQ 202
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
SG ++ + L+ G++ + +F+YG +R + ST+G+++Y P +
Sbjct: 203 HSGAGALGRVSVGTHVLLLSAGVVTAVPLLLFAYGARRIRFSTLGLLQYIGPTVQFALGA 262
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++P R FG + + +Y + + N +
Sbjct: 263 WFYREPFSPERAAAFGFIWAGLALYTVDNLWNQPR 297
>gi|83591410|ref|YP_425162.1| hypothetical protein Rru_A0070 [Rhodospirillum rubrum ATCC 11170]
gi|83574324|gb|ABC20875.1| Protein of unknown function DUF6, transmembrane [Rhodospirillum
rubrum ATCC 11170]
Length = 331
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 98/296 (33%), Gaps = 8/296 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ F+ A L+ I + L +L ++ R L +L + +
Sbjct: 40 NPLAAIGFIVLAMALFAIMDTLAKLLSAGQPILLIVLFRSLGALIVLTPVFL-------R 92
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L + F A+ + F +P++ L V LK
Sbjct: 93 QPASHRRLIQPRLLALRVVLGTTAVTLFFMAIAKMSLADVAAINFSSPLMVTLLSIVLLK 152
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ + +A L+ +L++ G L A+ C+A I +
Sbjct: 153 ERVGPRRWLALLVGFAGVLVILRPGGGVLSQYALFAVGGTLCYAVLMIILRLQGQIMTSA 212
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LF + + + + D L+ G++ + ++ A STV
Sbjct: 213 TSSFWFTLFSPLLVLPAMPAVWVTPDPGDLAMLLILGMVGGLAMLSMTQAMRLAPASTVA 272
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+Y+ + + + F+ + +++ + + L I + + K ++
Sbjct: 273 PFDYSYLIWAVAAGWFLFGDLPSPSSLMGLPLIIGSGLYILHRETIVNRRPKVLEA 328
>gi|319901042|ref|YP_004160770.1| hypothetical protein Bache_1174 [Bacteroides helcogenes P 36-108]
gi|319416073|gb|ADV43184.1| protein of unknown function DUF6 transmembrane [Bacteroides
helcogenes P 36-108]
Length = 315
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 95/296 (32%), Gaps = 3/296 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A +G+ PL+T L E + V+ R L+++P + + L
Sbjct: 4 KVKGYILGAVAAATYGMNPLFTLPLYKEGMDPDSVLFFRYLFAIPILGIMLKARGRNFRL 63
Query: 81 LKDTLKNP-KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + ++ S+ L + F + + F+ + ++
Sbjct: 64 KRKEIFSLVILGWLVAISSLTLFQSYNFMEAGIASTILFVYPILVALIMAVAFKEKITLQ 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
L + L+ TL+ L +A A++++ Y + +
Sbjct: 124 TVFCILLALSGIGLLYKGGEGATLNLIGVGLVMASALSYAVYIVGVNRPILKDVATLKVT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
VL +++ F H + + F + I+ +
Sbjct: 184 FYVLLFGLSLFLIRVDFGQSLHVVDKWYLWGNLIALAVFPTAISFLCTTQAIQYIGSTPT 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ P+ + V I + + ++++A+ + + I + +K
Sbjct: 244 AILGALEPVTAVFFGVTIFGESLTPRLCCGITLIILAVTFIIAGSNITPHLVRFRK 299
>gi|332827687|gb|EGK00426.1| hypothetical protein HMPREF9455_03274 [Dysgonomonas gadei ATCC
BAA-286]
Length = 303
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 88/291 (30%), Gaps = 2/291 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ G + + +G+ ++ L + ++ +R L S+ + +
Sbjct: 8 NMNKTKGIILALISSGTFGLIAFFSIPLLKTGMHAPSILFYRCLISVLLIGAVCLIRKKN 67
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + +G+L + ++ +I + + +I + +
Sbjct: 68 LRISPKAAAQLLCLGLLYTLTAMGLLYSYNYISSGVATTIHFLYPVSVSCMMIIFYREKL 127
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ +A + ++ +++ L L T+S Y + + E
Sbjct: 128 SRNLLFAAVLSLAGVAMLCWSDSGFINTTGLLAVLMTVFTYSIYIVWLNSPEIKRLEPET 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I V+ + V++ + G + +K A +
Sbjct: 188 ITFYVMLFGGFIFAVFSYSTTGIELLPDIPSVFNLIGLALFATVISNLALVAAVKHAGST 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ P++ + +P I++ A+++ +L +
Sbjct: 248 ITSILGSLEPVVATAVGILHFGEPFGWNGLFGLLIIISAVLLVILTGKKKA 298
>gi|307945708|ref|ZP_07661044.1| RhaT family transporter [Roseibium sp. TrichSKD4]
gi|307771581|gb|EFO30806.1| RhaT family transporter [Roseibium sp. TrichSKD4]
Length = 327
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 99/302 (32%), Gaps = 7/302 (2%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLP 65
+ AS + G F + + + + L SV ++I +L++
Sbjct: 4 SNNQNIRALMSPASPSPIRGLGFALTGFAFFAMHDALIKHLGTTYSVFQIIFFAMLFAFI 63
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ ++ + P+ ++V + + YA T F
Sbjct: 64 PMATIMLA------DKAEENFRPRHPWLVVARGALGIIGMSGAFYAFSTLPLTEVYGLLF 117
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
TP++ L E + + +A + ++ +LI+ A +A A
Sbjct: 118 STPLLITAFSVPLLGEVVRVRRWLAVFIGLIGVLIVLRPGVSEFTLGHAAALTAACASAL 177
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
++ + G ++ L ++ G + + +PD L L G G L+
Sbjct: 178 TSVVLRKIGGQERSAVLILYTMLAALLVTGILMPQTYKPIELPDLLLLAGVGFLSVCAQF 237
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y ++A + + ++Y+ L + V + D I IV+ + V +
Sbjct: 238 CIIYAYRQAPAAVIAPIQYSQILWAALFGVLFFMEKPDIYVAIGSAIVIGSGVFVVWRES 297
Query: 306 IN 307
Sbjct: 298 KQ 299
>gi|302876233|ref|YP_003844866.1| hypothetical protein Clocel_3423 [Clostridium cellulovorans 743B]
gi|307686965|ref|ZP_07629411.1| hypothetical protein Ccel74_02336 [Clostridium cellulovorans 743B]
gi|302579090|gb|ADL53102.1| protein of unknown function DUF6 transmembrane [Clostridium
cellulovorans 743B]
Length = 284
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/278 (13%), Positives = 92/278 (33%), Gaps = 6/278 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A + + I ++ + + + R L ++ +
Sbjct: 2 NNKTKGIMFMLIASLSFAIMTVFVKLSGDLPSTQKTFFRNLVTVVVALIPAL------KN 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ G+L+ +T+ + YA+ + ++P + +FLK
Sbjct: 56 KSKLFGKKENQGLLLIRSTLGTLGIVASFYAIDHLLLADATMLNKLSPFFVIIFSFLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q I+ ++ + L + S + A+ A C V + G
Sbjct: 116 EKITKAQFISLIIAFVGSLFIVKPSFNVSIIPALVAILGAICAGGAYTYVRTLRGREKNY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V + + L+ G+ S + A S +
Sbjct: 176 TIVFYFSLFSCVSTSPFLFISYHPMTLIQLSSLLIAGVFASIAQMTLTTAYSYAPASDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I +YT + + + + D + I + +++ +
Sbjct: 236 IYDYTQIIFSAFLGMMLFNEAPDYLSIIGYILIIGSSA 273
>gi|86357398|ref|YP_469290.1| hypothetical protein RHE_CH01768 [Rhizobium etli CFN 42]
gi|86281500|gb|ABC90563.1| hypothetical conserved membrane protein [Rhizobium etli CFN 42]
Length = 302
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 82/296 (27%), Gaps = 5/296 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F A ++ + ++ L + V R GGL
Sbjct: 2 KSKTHGYIFALLALTIFSLQDAISKHLASAYPPIFVTMIRYWAFGLFTIILASKMRGGLK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T + + V +LAV I + + TP++ L L
Sbjct: 62 ATARTKR----PVLQVARGLLLAVQVVLAITCFAVIGLARSQAIFSATPILIALLAMPIL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ + A + +L++ G + S + FA I
Sbjct: 118 GERVGWRRWAAIGAGLFGVLLILKPEGDFFDVKLLLAVASCFNFAFYVIATRLVSRDDSS 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ V G ++ + D ++ + + + V
Sbjct: 178 TTSFFYTGVVGAVAMTLIGPFYWSWMSSGDWGWMALVCMTSISSHYFLIRAYDSLDAAAV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ Y + + + V I + + + IVV A + + + + +
Sbjct: 238 QPLTYLSLVYASIIGVTIYGETLSLNTIVGSAIVVAAGIFTIWREHVVGRRAAKAR 293
>gi|313677635|ref|YP_004055631.1| hypothetical protein Ftrac_3553 [Marivirga tractuosa DSM 4126]
gi|312944333|gb|ADR23523.1| protein of unknown function DUF6 transmembrane [Marivirga tractuosa
DSM 4126]
Length = 280
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 93/278 (33%), Gaps = 8/278 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L++ A L+ ++ + L + +E++ R L S F +
Sbjct: 3 KGILYMIIAGFLFATMNVFVKMLPNIPAIEIVFFRSLISFVMSFVYLRAIR--------V 54
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+LV + AV + Y L F++P+ + LG +KER++
Sbjct: 55 PVMGNNKKLLVARGAVGAVALTMYFYTLQNIPLGSAVTMQFLSPIFTSILGVFIVKERVH 114
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q I ++ L+I+ + + S+ + + ++
Sbjct: 115 PKQWIFYIMAFAGLIIIQGFDPRISIEMFAIGIGSSIMAGLAYNIIRKINKTEHPLVIVF 174
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L G ++ + + L L+ G+L F + + LS V ++Y
Sbjct: 175 YFPLVTTPLTGLYSAFNWTMPVGEEWLILLAIGVLTQFAQYFMTMSYQSEDLSKVASLKY 234
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + + + +++ +++ +
Sbjct: 235 LTIVYALAYGYVFFDETYNWIVFSGIALILAGVILNVW 272
>gi|218194684|gb|EEC77111.1| hypothetical protein OsI_15534 [Oryza sativa Indica Group]
Length = 2209
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 21/284 (7%), Positives = 71/284 (25%), Gaps = 16/284 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ ++W L + + ++ R + A +
Sbjct: 1927 IAPLLFVVIWSTGFLVGRGVSAHADPFWFLAARFVGVAILFGAAAWWARVEWPRGP---- 1982
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
A+ + + + + + + P+ + + L RL
Sbjct: 1983 RRIALHLAAGALMNGLYVGPSWWAMSRGLPAGVMALIGALQPLFTALIAVAVLHRRLGPS 2042
Query: 147 QIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI--- 198
L + ++ +G+ L L + + + A +
Sbjct: 2043 TWAGLALGFGGVAMVLWPRLSASAGVAALPLPVLLAAAGSILALTVGSMVQKSPLAAGDL 2102
Query: 199 ---EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ G + + +L+ + + ++ +
Sbjct: 2103 RSASAVQNLGSIAVLALMASILGQPRWDGSPLLWGYLAYSVLVLSIGGATLLIWLMRHGE 2162
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P L + + I + + ++ + F I + + +
Sbjct: 2163 ATRTAALVLAVPPLSALQAWAIFGETLTALQVVGFAIAIAGVAL 2206
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 42/142 (29%)
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF 223
G+ ++ + V + F ++ F+ A+ + ++ E
Sbjct: 1921 GPGMHAIAPLLFVVIWSTGFLVGRGVSAHADPFWFLAARFVGVAILFGAAAWWARVEWPR 1980
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
G + +V + + + ++ PL + +V +L + +
Sbjct: 1981 GPRRIALHLAAGALMNGLYVGPSWWAMSRGLPAGVMALIGALQPLFTALIAVAVLHRRLG 2040
Query: 284 TVRTIVFGIVVIAMVVYLLPTV 305
+ + + L P +
Sbjct: 2041 PSTWAGLALGFGGVAMVLWPRL 2062
>gi|89096755|ref|ZP_01169647.1| hypothetical protein B14911_13982 [Bacillus sp. NRRL B-14911]
gi|89088770|gb|EAR67879.1| hypothetical protein B14911_13982 [Bacillus sp. NRRL B-14911]
Length = 334
Score = 86.9 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/305 (11%), Positives = 97/305 (31%), Gaps = 11/305 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+S+ G L V + WGI + L Q + V +++ R+L + + +
Sbjct: 19 SSMDRRKGILLVMTGAMFWGIGGTAAKKLFQDFQIDVDWLVTVRLLIAGVLLLAVQYFAK 78
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+L K A+ +++F + ++ ++ + + ++ PV+ +
Sbjct: 79 DRAQILGVWKKKSSALRLIIFGLLGMLAVQYTYMASIEHGNAAVATLLQYLAPVMIILYL 138
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKT 187
+ + L ++ L + + + I + ++ A+
Sbjct: 139 VLRKQTVLTRGDLLTIALALFGSFFLLTNGSISHLSVPVPAVVWGVLSGAALAFYTLYAV 198
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + I L + + F +
Sbjct: 199 PLLKEYDSLVIVGWAMVIGGLALSFVHPPWRMDILSFTGEVYVYLAFVVLFGTMIAFWFY 258
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + ++ PL ++++VF LK+P + + ++ ++ L
Sbjct: 259 IESLQSLQPKETSLLGSVEPLAAVLTTVFWLKEPFGVFQWVGTACIIGMILFIALKKEPA 318
Query: 308 SGKNK 312
K +
Sbjct: 319 EEKRR 323
>gi|163733283|ref|ZP_02140727.1| integral membrane protein, putative [Roseobacter litoralis Och 149]
gi|161393818|gb|EDQ18143.1| integral membrane protein, putative [Roseobacter litoralis Och 149]
Length = 329
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 85/285 (29%), Gaps = 7/285 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G F A+ ++ + + L S ++++ V++S P ++
Sbjct: 2 NPNVKGASFALIAFAVFASHDVIIKVLGASYSPIQIVFFGVVFSFPLAMLYLL------R 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
P + + YA F P++ L L
Sbjct: 56 DTTSGTLLPVHPWWMAARTVAAVITGFCAFYAFSVLPLAQVYAILFAAPLLITILAIPIL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ + IA + + +LI+ L +A SA C + +I V
Sbjct: 116 GEQVRWQRWIAVFIGLCGVLIVLRPGQQELALGHLAALISAICGSFASIIVRKIGREERT 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ P + V + + D L +L + V
Sbjct: 176 VVIMLYPMMANFVVMAALLPLVYQPMPLADLGKLGVIAVLAWIAGRFLIAAYNSGEAVIV 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
M+Y+ L V + D +++ + + +L
Sbjct: 236 APMQYSQILWATFYGVLFFDEVPDMPTIAGSAVIIASGLFIVLRE 280
>gi|71083686|ref|YP_266406.1| rarD protein [Candidatus Pelagibacter ubique HTCC1062]
gi|71062799|gb|AAZ21802.1| rarD protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 293
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 4/287 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITP-LYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G WG+ +Y +++ +EV+ HR +W+ + YFS
Sbjct: 3 KQKFNTGIGLTALGSFWWGVIGVIYFKYISFAGSIEVVIHRCVWTSVALIITTFYFSK-W 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +KN + + L FS+ ++ ++W +IYA+ T + SF YF+ P++SVFLG +F
Sbjct: 62 DIFFEIIKNKRNIIYLFFSSLLIFINWATWIYAVGTEKIIDASFGYFIMPILSVFLGYIF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTL--HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
E++N + ++ LL++LS+ + IP + + +A++W Y RK + V + G
Sbjct: 122 YGEKINKRRCLSILLVLLSISFLLFKSFHSIPWVGIIVALSWGFYNLLRKKVNVDTDVGL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE + ALF + F + L+ G + ++ G++ L
Sbjct: 182 LIESLFILPFALFAFFLLFKNNLNLFSINEPSLMFILMLAGPMTVIPLFLYVRGVELCGL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
G++ Y P + F + +++ F ++ IA+++YL
Sbjct: 242 GPTGMIFYITPTFQFLLGFFYYDEAFSFDKSLSFILIWIAVIIYLKD 288
>gi|331091082|ref|ZP_08339924.1| hypothetical protein HMPREF9477_00567 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405304|gb|EGG84840.1| hypothetical protein HMPREF9477_00567 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 299
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 85/300 (28%), Gaps = 12/300 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++ + ++WG + ++ + + R L + IVY S
Sbjct: 1 MQKEKIRNSILLLLTAVIWGTAFVAQSVGMDYIGPFTFNAARFLIGGTVLIPLIVYRSKK 60
Query: 78 LSLLK------DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
LLK V L + F +I
Sbjct: 61 NPLLKNQTLEEKRKNQKTEWIGGVCCGIALCGASLLQQMGIQHTTVGKAGFIT-TLYIII 119
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKT 187
V L +F +++ + A++ ++ L ++ G + + A
Sbjct: 120 VPLIELFFGKKIAKKIWLGAVMAVIGLYLLCINENFSIGKGDFLILVCAILFAIHILIID 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
++G + + V+ + L + + +
Sbjct: 180 HFSPKADGVVLSAIQFFVSGFISVIGAILVENPNPAAMLDAIVPILYAGVMSCGVAYTLQ 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G K + ++ ++ +++ IL + + + IV +A+V+ LP
Sbjct: 240 VIGQKNISPTVASMILSLESVISVLAGWIILGEALSAKEIVGCVIVFMAVVLVQLPEKKK 299
>gi|157164409|ref|YP_001466724.1| RarD protein [Campylobacter concisus 13826]
gi|112800181|gb|EAT97525.1| RarD protein [Campylobacter concisus 13826]
Length = 276
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 143/278 (51%), Gaps = 5/278 (1%)
Query: 36 LWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG +Y V E+++HR++WS + A++Y SG ++ + LK+ ++ L
Sbjct: 1 MWGFLAVYFNLFSKDVDAYEILAHRIIWSF-FLMAAVIYLSGKMNEILTLLKDIGSLKAL 59
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
S T+++++WG ++YA+ + TS YF+ P+I++ LG + KERL ++A ++
Sbjct: 60 FLSGTLISINWGVYVYAVGNGKILDTSIGYFINPLINMLLGVIVFKERLGKSGVVAVCIV 119
Query: 155 ILSLLIMT-LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
++++ + G+PL+S+ + +++ Y RK + + G FIE + A YV+W
Sbjct: 120 MVAVFVQIYFQGGLPLVSIILPLSFGLYGVVRKKAKISAFNGLFIETLFIFPFAFGYVLW 179
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
F HF L + L+ F+ R L+T+G ++Y +P + I+
Sbjct: 180 LVFHSQSHFGLNKDSVLMIA--SSLVTIVPLVAFNAAATRINLTTIGYLQYISPTIAILC 237
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+VFI + +D + + F ++ +A+ + + + KN
Sbjct: 238 AVFIFNETLDVYKIVSFCLIWLALAIISINKITKRNKN 275
>gi|71281773|ref|YP_270188.1| membrane protein [Colwellia psychrerythraea 34H]
gi|71147513|gb|AAZ27986.1| membrane protein [Colwellia psychrerythraea 34H]
Length = 298
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 108/286 (37%), Gaps = 9/286 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A L+G T L+++ + + L++ +R + +F + +SL
Sbjct: 19 LLYLHIAVFLFGGTALFSKLI-GLPALDITVYRTGIAALALFILLTLQKKQISL-----S 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K G+ + ++ +HW + + + ++F PVI+VF+ F +
Sbjct: 73 SMKDYGIAILLGCVVGLHWVTYFTGMQMAGVTVGMIAFFTYPVITVFIEPFFNRTVPKMK 132
Query: 147 QIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+I A ++I+ ++++ L + + + + R + + +L
Sbjct: 133 DMITAFVVIIGIVLLIPEISFGNQITLGIVTGIISAVFFALRNILHKNYFSHYSGPHTML 192
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ F + L L+ + + +F+ ++ +T G++
Sbjct: 193 YQTLVACLMLCLFVEVPPMQVTESDWLLLLLVGVVFTATPHALFASSLRSLSATTAGLIS 252
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
PL + ++ +L + D + I +VV A +
Sbjct: 253 CLQPLYGSILAIILLHERPDILTIIGGLLVVSAAIFETWSVSRGRR 298
>gi|66801187|ref|XP_629519.1| hypothetical protein DDB_G0292606 [Dictyostelium discoideum AX4]
gi|60462909|gb|EAL61106.1| hypothetical protein DDB_G0292606 [Dictyostelium discoideum AX4]
Length = 698
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 89/298 (29%), Gaps = 26/298 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + A L+ + + + LE+ R + L G +
Sbjct: 405 KGLILLVFAAFLFSFMAYLVKLISKEFDSLEIAFMRSFYGLIGCIIILFSLREN------ 458
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L L A+ + Y L F +PVI+ L +V LKE+
Sbjct: 459 PLGPKNVRWFLAARGLSGAISLCAYFYTLTVLPLSEAVIISFTSPVITAALAAVVLKEKW 518
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA-------------------IAVTWSAYCFA 184
++ I A L + +++++ S + + +
Sbjct: 519 GGIEAICAFLSLCGVVVVSKPSFLFHHHTDGSTTENGEDSGKLLYVLIGVGGAFFTAVSY 578
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
VG S F+ + + + + + F+ + + +
Sbjct: 579 IAVRKVGPSVNPFVLVIYFSAVSSALCLPSSFAFQTFVWPSLKAWGYITLIGVVATIAQG 638
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + K ST M Y + + + ++ QP+D + + +++ +
Sbjct: 639 AVNAGIQLSKKTSTAAAMNYLQIIFTFIWQITLMHQPLDWITILGALLILCCAGITAF 696
Score = 43.0 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 47/133 (35%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + F + + S E +E+ + LG FL
Sbjct: 410 LVFAAFLFSFMAYLVKLISKEFDSLEIAFMRSFYGLIGCIIILFSLRENPLGPKNVRWFL 469
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
GL + C + Y + LS I+ +T+P++ + +LK+ + I +
Sbjct: 470 AARGLSGAISLCAYFYTLTVLPLSEAVIISFTSPVITAALAAVVLKEKWGGIEAICAFLS 529
Query: 294 VIAMVVYLLPTVI 306
+ +VV P+ +
Sbjct: 530 LCGVVVVSKPSFL 542
>gi|55376825|ref|YP_134676.1| hypothetical protein pNG7270 [Haloarcula marismortui ATCC 43049]
gi|55229550|gb|AAV44970.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 329
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 92/303 (30%), Gaps = 9/303 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G LF A ++WG++ + + LE V + + + R + + ++
Sbjct: 2 THSTRYIGLLFAALA-LIWGLSFVAIKTGLESVPPVLLAAVRHDIAAVVLLGYALWRGRS 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + +G V A+ + Y + L S + VTP + L
Sbjct: 61 LRPQTRDDWSLILIGGTVLIGAHFALLFLGQQYVPSSFGAILLSLTPVVTPAFASTLIPS 120
Query: 138 FLKERLNHLQIIAALLI-------ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ + + + + L L+S A+A A R T +
Sbjct: 121 YRARPHELIGTVCGFIGVVIIANPTPGAVGGRLLGVALLISSAVAFAVGAVLTERYTSSL 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ A +G + ++ F ++
Sbjct: 181 PLVSLQAWMTLLGAGILHAVSAGLPSEQLGTVTVGLEQLAAIAYLGIVASAIGFLLYFRL 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I + ++ Y P + +S +L + + V F ++V+ + + +
Sbjct: 241 ISTVGAAETSLVSYVVPAVTAISGWLLLGETLGPVTVAGFAVIVVGFAWVKADVLRSLRR 300
Query: 311 NKT 313
+T
Sbjct: 301 RRT 303
>gi|256840626|ref|ZP_05546134.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256737898|gb|EEU51224.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 322
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/309 (11%), Positives = 100/309 (32%), Gaps = 15/309 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVY 73
K+ + G + + +G+ PL+T L + + ++ +R L++ + ++
Sbjct: 9 KKYNMNNNLKGFAYGIATSVTFGLIPLFTLPLMEKGMRFDSILFYRFLFAAIALSGMLLA 68
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + +L+ F + + + +F P+
Sbjct: 69 KKESFRT------EMRNLPILILLGAFYTGSAMFLFWGYNFMAAGIATTLHFTYPIFVTL 122
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARK 186
KE+ + + ++A L I + +++ G ++ L AV ++ Y
Sbjct: 123 FMLFVFKEKTSWITLLAIGLAICGVARLSIDGGEMRLNGLGVIIVLLSAVAYALYIVTVN 182
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
V G + V + + + G ++ L
Sbjct: 183 KSRVHDMPGRKLTFYVFIVSTSLFFIKAQAGTGIQPIPDLPSFINLVLLAFLPTVVSNIT 242
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + ++ T P+ + V + +P + ++++A+ + +L I
Sbjct: 243 LVQAVHHIGSTLTSVLGATEPVTAVCVGVLVFGEPFTPHLALGILLIIVAVTLIILSKYI 302
Query: 307 NSGKNKTKK 315
++ K+
Sbjct: 303 QKNLHEAKR 311
>gi|258655248|ref|YP_003204404.1| hypothetical protein Namu_5146 [Nakamurella multipartita DSM 44233]
gi|258558473|gb|ACV81415.1| protein of unknown function DUF6 transmembrane [Nakamurella
multipartita DSM 44233]
Length = 319
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 81/287 (28%), Gaps = 4/287 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G + ++WGI L + + V L V R L + + L +
Sbjct: 2 TRRGWVLFAALSLIWGIPYLLIKIAVTDVDPLVVAFGRTLIGALILLPVAL-HRRVLGPV 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K ++ S L + T L +++ F
Sbjct: 61 FRRWKVLLLYTVIEISGPWLLLGHAETKLNSSTAGLLLAVVPMIAAIILTATGHDRFDAR 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R+ L + + L L + + + + A + +
Sbjct: 121 RVIGLVVGFTGVAFLVGLDIHFDDLTAVGLVMLVAVGYAVGPIIINRRLADLPPIGVVTA 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + Y + FS + + F +F I A + +
Sbjct: 181 SLIVATVLYAPFTAFSWPVTMTADAA--WSIAGLGVICTAVAFLVFFALIAEAGPARATV 238
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ Y P + I V +L +P+ I F +V++ ++
Sbjct: 239 ITYINPAVAITLGVLLLDEPLTAGMAIGFPLVILGSILATARVRRRR 285
>gi|164688404|ref|ZP_02212432.1| hypothetical protein CLOBAR_02049 [Clostridium bartlettii DSM
16795]
gi|164602817|gb|EDQ96282.1| hypothetical protein CLOBAR_02049 [Clostridium bartlettii DSM
16795]
Length = 296
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/285 (14%), Positives = 99/285 (34%), Gaps = 20/285 (7%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
V A +LWG ++ + + + +E+ R + + + L+
Sbjct: 8 VLIAMLLWGSLGVFVKNIS-LDSVEIAFFRGIIGSVFLGIVLFIRMQNNKKLEQENDKLN 66
Query: 90 AVG-------------MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + S + ++W F + + Y++ PVI +F+
Sbjct: 67 NDFEDEDKKPSKKSIIIFIISGMAIGLNWVFLFNSYNYITVANATIVYYLAPVIVIFVSP 126
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPV 190
+FLKE+L +++A + ++ L+++ + Y
Sbjct: 127 IFLKEKLTLKKVLAVMCAMIGLVLIVRTGQSSTNINLTQGIINAFLAACLYASVIILNKF 186
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + A ++ F L LI +C++
Sbjct: 187 IKNVDDYTKTFIQLFMASMVLLPWVIFRNNIIFDSTKSIILILILGIAHTGIAYCLYFSA 246
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+K K ++ I+ Y P+ +V S+F+L++P + I I++
Sbjct: 247 MKDLKAQSIAILGYIDPVSSVVFSIFLLREPFSIYQLIGGVIILF 291
>gi|319651278|ref|ZP_08005408.1| hypothetical protein HMPREF1013_02020 [Bacillus sp. 2_A_57_CT2]
gi|317397058|gb|EFV77766.1| hypothetical protein HMPREF1013_02020 [Bacillus sp. 2_A_57_CT2]
Length = 306
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 99/297 (33%), Gaps = 12/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ + + LWGI ++ + L + +E+++ RV ++ + +
Sbjct: 1 MKKILPFIMIALGASLWGIIAVFVKGLGEYGFTAMEIVAARVFFAAIFLVLIGIMR---F 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ + + P L +F
Sbjct: 58 RNCFKLQSASDIRLFAGTGILSIVFFNYCYFTAMNQISISMAVVLLYTAPAFVTVLSYLF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-------TWSAYCFARKTIPVG 191
LKE +N +I A IL +++ + + + A +
Sbjct: 118 LKEGINLGKIAAVAGTILGCILIAGVTAGSRDITLLGIMTGLGSGFGYALYTIFGKFALR 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + I ++F + FL L + + + ++++G+
Sbjct: 178 KYHPYTVTLYTFLIASVFLIPVTRLWTKAEIFLNTEVLFLSIGLGFVPTVLAYFVYTWGL 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ S ++ P++ ++ V + + + V+ +++ ++++ LP +
Sbjct: 238 EKTDGSKAAVIATVEPVVAMLLGVTLYGESLGAVQIAGALLILSSVIIVNLPARRKN 294
>gi|224535289|ref|ZP_03675828.1| hypothetical protein BACCELL_00150 [Bacteroides cellulosilyticus
DSM 14838]
gi|224523097|gb|EEF92202.1| hypothetical protein BACCELL_00150 [Bacteroides cellulosilyticus
DSM 14838]
Length = 311
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 103/304 (33%), Gaps = 15/304 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + A +G+ PL+T L E ++ V+ R L+++P + +
Sbjct: 2 NTKVKGYILGAVAAATYGMNPLFTLPLYKEGMNPDSVLFFRYLFAIPILGIMLKARGRSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
SL + + ++A+ + + + S FV P++ + +V
Sbjct: 62 SLKRKEILPLVI------LGWLVAISSLTLFQSYNYMEAGIASTILFVYPILVALIMAVA 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVG 191
KE++ ++ L + + ++ L +A A++++ Y +
Sbjct: 116 FKEKITLQTVLCIFLALSGIGLLYKGGDGTTLSLVGVGLVMASALSYAIYIVGVNRPILK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ VL ++V F H + + F + +
Sbjct: 176 DVATLKVTFYVLLFGLSLFLVRVDFGQSLHVVDKWYLWGNLIALAIFPTAISFLCTTQAV 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + I+ P+ + V I + + ++++A+ + + I +
Sbjct: 236 QYIGSTPTAILGALEPVTAVFFGVTIFGESLTPRLCCGIVLIILAVTFIIAGSNITTHLV 295
Query: 312 KTKK 315
+ +K
Sbjct: 296 RFRK 299
>gi|225024044|ref|ZP_03713236.1| hypothetical protein EIKCOROL_00911 [Eikenella corrodens ATCC
23834]
gi|224943069|gb|EEG24278.1| hypothetical protein EIKCOROL_00911 [Eikenella corrodens ATCC
23834]
Length = 299
Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 139/294 (47%), Gaps = 3/294 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
S G V Y++WG PLY L + +S ++++HR++W+ A+
Sbjct: 4 THSTEYRRGLYCVIGCYLIWGFFPLYWLPLVGQPISAGQLMAHRIVWASLLAIGAVACSP 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ L +K+ + + +T+LA +W ++ A+ RQ S YF+ P+ S+F G
Sbjct: 64 SARTQLVQAVKSRQTLTAFAICSTLLATNWLLYLAAITQRQVLQASLGYFIAPLASIFCG 123
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMT-LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL+E L LQI A LL I+ ++ ++ +P ++L + V+WS Y RK P+ +
Sbjct: 124 RLFLREALRPLQIGAILLAIVGVVWLSAWGGQMPWIALGLGVSWSIYGLLRKLAPLPALP 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GF +E +L AL Y+ W+ G F +IG G +F+ +R
Sbjct: 184 GFTLETLMLLPFALLYLGWHYRHGSLVFTQLPPLPLAIVIGSGAATMIPLLLFAAAAQRI 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+L+T+GI++Y +P L + + +P ++ + V + +++
Sbjct: 244 RLTTIGILQYLSPSLQFLLGLTAFHEPFSRMQFAGYLWVWAGVALFVWAARKKQ 297
>gi|148254275|ref|YP_001238860.1| hypothetical protein BBta_2825 [Bradyrhizobium sp. BTAi1]
gi|146406448|gb|ABQ34954.1| hypothetical protein BBta_2825 [Bradyrhizobium sp. BTAi1]
Length = 317
Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 92/291 (31%), Gaps = 8/291 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + G + + ++L + +E+ R + A++
Sbjct: 22 RPFRGIALILLSTVFLGTSDVTAKYLSKTLPAIEITWIRFTVFALIMVPAMI------PG 75
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + L FFI L S + FV P+ L +FL
Sbjct: 76 SPLFAMRTERLPFQLLRGVALLGSSIFFITGLGYLPIAEASATGFVAPLFVTALSIIFLG 135
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ + IA + + +LI+ A+ SA+ +A I G +
Sbjct: 136 EKVGLRRWIATAVGLCGVLIILRPGTGAFHLAALFPIASAFSWACTLIMTRIMSGREHAI 195
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ ++ + + + D F + G+ ++ I + A S +
Sbjct: 196 TIMTYSSIAGLCLLSAMVPFVWITPSWQDIGFGVLVGVASTMGQWIVVLAFRYADASVLA 255
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
YT L + + F+ + + +V + +Y
Sbjct: 256 PFSYTQLLWVSLLGFFVFGEVPSIWTVVGAAFIVSS-GLYTAHRERVRRSQ 305
>gi|315125630|ref|YP_004067633.1| permease [Pseudoalteromonas sp. SM9913]
gi|315014143|gb|ADT67481.1| permease [Pseudoalteromonas sp. SM9913]
Length = 288
Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 105/285 (36%), Gaps = 9/285 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+++ A +L+G T L+ + + ++ L++ ++R + + + + L +
Sbjct: 8 LIYLHIAVLLFGGTALFAKLI-GLNALDITAYRAAIAGLAICVLLTLQKKPIKLHRAKD- 65
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +HW + + + ++F PVI+VFL +F K +
Sbjct: 66 ----YVIAILLGVAVGIHWVTYFVGMQLAGITVGMLAFFTYPVITVFLEPLFNKSKPKTK 121
Query: 147 QIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
II+A+++I + ++ + L + V + + R + +
Sbjct: 122 DIISAVVVIFGIYLLIPNVNLGDDITLGVVTGVVSALFFALRNITHKRYFSEYGGPQTMF 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ F + + L LI + + +F+ +K +T G++
Sbjct: 182 YQTLVASLMLCAFIEVPITEINDTDLILLLIAGVVFTAMPHSLFAASLKHLSAATAGLIS 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
PL + ++ IL + + I ++V A
Sbjct: 242 CLQPLYGTILAIIILHERPSVMTLIGGALIVSAACFETWSISRKK 286
>gi|13476395|ref|NP_107965.1| hypothetical protein mlr7703 [Mesorhizobium loti MAFF303099]
gi|14027156|dbj|BAB54110.1| mlr7703 [Mesorhizobium loti MAFF303099]
Length = 347
Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 94/304 (30%), Gaps = 16/304 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
T+ G + ++ + V +++ R +++ + + +
Sbjct: 43 TLRGIALKIVSVAVFVGMQTCIKAAGDVPAGQIVFFRSFFAIFPIIAFLALKGQLPTAFV 102
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V + G +AL + P++ V SVFL E
Sbjct: 103 TK-----RPFNHVARGVVGVGAMGLGFFALTRLPLPEAITLNYAQPLLVVVFSSVFLGES 157
Query: 143 LNHLQIIAALLIILSLLIMTL----------HSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + A + ++ +LI++ + +A +A A + V +
Sbjct: 158 IRVYRWSAVAVGLIGVLIISWPELTLLNSDEGLDDQEVLGVMAALVAAAISAVAMLLVRN 217
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + V + + + L+ G + + +
Sbjct: 218 LVQTEKTATIVLWFSSTASVLSLLTLPFGWQSLTPVQAALLVMAGFCGGLGQILMTSAYR 277
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV-INSGKN 311
A+ S V EYT+ +L +V FI I IVV A V + + +
Sbjct: 278 HAEASVVAPFEYTSMILGVVVGYFIFGDVTSLNTLIGGAIVVAAGVFIIWRERQLGLERT 337
Query: 312 KTKK 315
+T+K
Sbjct: 338 RTRK 341
>gi|39935220|ref|NP_947496.1| DMT family permease [Rhodopseudomonas palustris CGA009]
gi|39649071|emb|CAE27592.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Rhodopseudomonas palustris CGA009]
Length = 304
Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 94/301 (31%), Gaps = 10/301 (3%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFA 70
+ L+ +A P + G + + + + ++L + +E+ R L L +
Sbjct: 2 RRLTHRHADHP-LRGIALIVGSTVFLACSDTLAKYLGRTLPPIEIGWIRFLVFLLIMIPV 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ ++ + V A L FI +L S + FV P+
Sbjct: 61 ALASK-------ESPLRSVRPKLQVLRALALVSSSVLFITSLQFLPIAEASATSFVAPLF 113
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L L E + + IA L+ ++ +LI+ + SA+ +A
Sbjct: 114 VTALSIPLLGEHVGIRRWIATLVGLVGVLIVIRPGSAAFEPAVLLPILSAFVWALTLTLT 173
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + ++ AL + + + D + GL ++ +
Sbjct: 174 RMISGADRAVVTMSFSALVGFITLSALVPFVWVTPSWQDIGIGLLVGLASTMGQWVVVLA 233
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A S + Y+ + + + + D +++ +Y K
Sbjct: 234 YRYADASVLAPFTYSQLVWVAFLGFGVFGEVPDVWTFAGAAVII-GSGIYTAQRERLRRK 292
Query: 311 N 311
Sbjct: 293 Q 293
>gi|303256554|ref|ZP_07342568.1| protein RarD [Burkholderiales bacterium 1_1_47]
gi|331000542|ref|ZP_08324213.1| protein RarD [Parasutterella excrementihominis YIT 11859]
gi|302860045|gb|EFL83122.1| protein RarD [Burkholderiales bacterium 1_1_47]
gi|329571306|gb|EGG52995.1| protein RarD [Parasutterella excrementihominis YIT 11859]
Length = 303
Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 4/296 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L AY+ WG PLY V EVI HRVLWSL + ++ S L
Sbjct: 6 KGLLAAVGAYLCWGFMPLYWALFGGVRGWEVIGHRVLWSLILISAFLMLIGRFSEIFSTL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K P L +A I A++W +YA + Q F+TP+ +V LG VF +E
Sbjct: 66 RTFKKQPIQYFNLFAAAAIAAINWWINVYAATSNQVVELGIGMFLTPLFTVALGVVFFRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ L+ ++ L L + IM G +P ++L ++ +W+ Y +K + + +E
Sbjct: 126 RLSRLKQLSVFLPFLGVCIMIYTLGRMPWIALGVSSSWALYGVFKKRLGIDPWVSNALEA 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A+ Y+ + +G F G T+ LI GL+ S FS L+ +G
Sbjct: 186 SLMLPFAIAYLFYLDANGVGAFLAGGTYITILLISVGLVTSVPMIAFSAAANVLPLTILG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++Y P+L ++ + +P + + I + ++ ++ K + +
Sbjct: 246 FIQYMNPILTLIVGLVFFHEPFNHQQLIPLLFIWAGILTFIYSEFKEKAARKVQAA 301
>gi|91763274|ref|ZP_01265238.1| rarD protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91717687|gb|EAS84338.1| rarD protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 293
Score = 86.1 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 131/287 (45%), Gaps = 4/287 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITP-LYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G WG+ +Y +++ +EV+ HR +W+ + YFS
Sbjct: 3 KQKFNTGIGLTALGSFWWGVIGVIYFKYISFAGSIEVVIHRCVWTSVALIITTFYFSK-W 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + +KN + + L S+ ++ ++W +IYA+ T + SF YF+ P++SVFLG +F
Sbjct: 62 NIFFEIIKNKRNIIYLFISSLLIFINWATWIYAVGTEKIIDASFGYFIMPILSVFLGYIF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTL--HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
E++N + ++ LL++LS+ + IP + + +A++W Y RK + V + G
Sbjct: 122 YGEKINKRRGLSILLVLLSISFLLFKSFHSIPWVGIIVALSWGFYNLLRKKVNVDTDVGL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
IE + ALF + F + L+ G + ++ G++ L
Sbjct: 182 LIESLFILPFALFAFFLLFKNNLNIFSINEPSLMFILMLAGPMTVIPLFLYVRGVELCGL 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
G++ Y P + F + +++ F ++ IA+++YL
Sbjct: 242 GPTGMIFYITPTFQFLLGFFYYDEAFSFDKSLSFILIWIAVIIYLKD 288
>gi|52424633|ref|YP_087770.1| RarD protein [Mannheimia succiniciproducens MBEL55E]
gi|52306685|gb|AAU37185.1| RarD protein [Mannheimia succiniciproducens MBEL55E]
Length = 298
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 137/293 (46%), Gaps = 4/293 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + F Y +WG P+Y L + ++++ R++WS+ F ++ F
Sbjct: 4 SISAKLKGWHYAFACYAIWGTFPIYWYPLNSSAMPADQILAQRIVWSVVFAVFLLIIFKQ 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++L+ K + S+ ++A++W +++A+ S YF+ P+ +VFLG
Sbjct: 64 SRAVLRAFTKPKILA-IFFLSSFLIALNWLVYLWAITNHHVLDASLGYFINPLFNVFLGR 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ KERLN Q++A +L + + +G P ++L +A ++ Y RK P+ + G
Sbjct: 123 LVFKERLNKPQLLALCFATAGILWLAIPAGQIPWVALLLAGSFGFYALIRKLAPMEALAG 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+E +L+ AL Y+ + F N L+G G + F+ G ++
Sbjct: 183 LALETLLLSPFALAYLFFCYTQNTLVFSELNSLQLGVLLGSGAATTIPLLWFAMGARQIS 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+S +G+++Y +P L + + + + R I + +V I + ++LL
Sbjct: 243 MSLLGMLQYISPTLQFLCGSLLFGEALSITRLIGYSLVWIGVAIFLLAMRKKM 295
>gi|331092119|ref|ZP_08340950.1| hypothetical protein HMPREF9477_01593 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402320|gb|EGG81891.1| hypothetical protein HMPREF9477_01593 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 305
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/304 (12%), Positives = 92/304 (30%), Gaps = 17/304 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + ++WGI ++ + L + +E+ R + F ++
Sbjct: 2 NQRSKGIILAVTTAVMWGIMGIFVRDLSHNQFTNIEISFFRCALAGAAYFIFLLLTKPSA 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ V +++ A ++ + + ++ + + F++P+ V LG+V
Sbjct: 62 LKVNI----KGLVICVLYGAVAYSISFVSYSVSVSRIPVGVATVLMFMSPIWVVILGTVM 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-----------LLSLAIAVTWSAYCFARKT 187
KE+L +I+ ++ + +++ G + I V
Sbjct: 118 FKEKLQKSKIVTIVICFIGAILVANLIGGGEIKLDAIGILAGIINGIGVALQILLPKFFA 177
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
A LF + + + L
Sbjct: 178 KEYDRDTLLVYGFLGAASVLLFGMDFGSVAEHISNTPMTNLIWDLFGIGILCTMVANAAC 237
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + ST I+ ++ + FI + + ++ I+V+ + +
Sbjct: 238 VKSTQYVEASTTSILSALEVVVGTLVGFFIFHEHLTFLQIAGAVIIVVGAIGSEIYQPKK 297
Query: 308 SGKN 311
GKN
Sbjct: 298 KGKN 301
>gi|150008186|ref|YP_001302929.1| hypothetical protein BDI_1552 [Parabacteroides distasonis ATCC
8503]
gi|255015139|ref|ZP_05287265.1| hypothetical protein B2_14622 [Bacteroides sp. 2_1_7]
gi|262381236|ref|ZP_06074374.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298376386|ref|ZP_06986341.1| membrane protein [Bacteroides sp. 3_1_19]
gi|301309698|ref|ZP_07215637.1| putative membrane protein [Bacteroides sp. 20_3]
gi|149936610|gb|ABR43307.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
gi|262296413|gb|EEY84343.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298266264|gb|EFI07922.1| membrane protein [Bacteroides sp. 3_1_19]
gi|300831272|gb|EFK61903.1| putative membrane protein [Bacteroides sp. 20_3]
Length = 310
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 98/304 (32%), Gaps = 15/304 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + +G+ PL+T L + + ++ +R L++ + ++
Sbjct: 2 NNNLKGFAYGIATSVTFGLIPLFTLPLMEKGMRFDSILFYRFLFAAIALSGMLLAKKESF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L+ F + + + +F P+
Sbjct: 62 RT------EMRNLPILILLGAFYTGSAMFLFWGYNFMAAGIATTLHFTYPIFVTLFMLFV 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVG 191
KE+ + + ++A L I + +++ G ++ L AV ++ Y V
Sbjct: 116 FKEKTSWITLLAIGLAICGVARLSIDGGEMRLNGLGVIIVLLSAVAYALYIVTVNKSRVH 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + V + + + G ++ L +
Sbjct: 176 DMPGRKLTFYVFIVSTSLFFIKAQAGTGIQPIPDLPSFINLVLLAFLPTVVSNITLVQAV 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ T P+ + V + +P + ++++A+ + +L I +
Sbjct: 236 HHIGSTLTSVLGATEPVTAVCVGVLVFGEPFTPHLALGILLIIVAVTLIILSKYIQKNLH 295
Query: 312 KTKK 315
+ K+
Sbjct: 296 EAKR 299
>gi|239833887|ref|ZP_04682215.1| Hypothetical protein OINT_2000676 [Ochrobactrum intermedium LMG
3301]
gi|239821950|gb|EEQ93519.1| Hypothetical protein OINT_2000676 [Ochrobactrum intermedium LMG
3301]
Length = 326
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 112/305 (36%), Gaps = 7/305 (2%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFF 69
+ ++ + S + G Y + + ++L V +++ R L + +
Sbjct: 25 GESMNTGSVSSRPLAGIALACGGYACFALQDAMVKWLVATYQVPQILFMRSLV-IVLITG 83
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
++ + S+ K +N + + L + + + YF P+
Sbjct: 84 VLIRYHRHPSIFKSPYRNTIVLRAGLMLGAWLLFYNA-----ARHLELAELTTLYFSAPI 138
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ +FL + LKE++ + IA + + + + + P L A + +C+A TI
Sbjct: 139 MVMFLSILVLKEKIGPGRWIACAIGFIGVTVAANPTHSPNLIPAAMCIVAGFCWAWSTIL 198
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ M + +L + + S + ++ + +I GL+++ +
Sbjct: 199 IRLVSRSETTMTQMYATSLLFGLACALSFPWTWQEPDLSGWVLMICLGLVSTLGQFLLYE 258
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + A S + +EY+ + + I + T ++V+A ++ + +
Sbjct: 259 GFRHAPASALAPVEYSGLIWAFIYGYLIWAEVPATNVFAGAFLIVLASLLLIAWEQRQAN 318
Query: 310 KNKTK 314
K +
Sbjct: 319 LRKRR 323
>gi|257469644|ref|ZP_05633736.1| transporter [Fusobacterium ulcerans ATCC 49185]
gi|317063880|ref|ZP_07928365.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689556|gb|EFS26391.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 283
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 96/282 (34%), Gaps = 7/282 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
L + + + + + ++L+ + + E + R L SL F+ I
Sbjct: 2 SNKTKAVLSMLISALGFTFMSVTVKYLKDIPLFEKVFFRNLVSLVIAFYLI------KKS 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K L+ A YA+ ++ ++P+ + +FLK
Sbjct: 56 SAPVFGQRKNQLALLARAGFGLAGVILNFYAISHLTLADSTMLGKLSPIFVTIMACLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ QII + L++ + +IA SA + +
Sbjct: 116 EKIDKEQIIGIFITFGGALLVIKPEFSLSIIPSIAGLLSAAAAGIAYTLLRYLKDKESPD 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ ++ V+ + + + + L+ GL S +Y K +K + V
Sbjct: 176 TIVFYFSIVSVLGTLPFVLNDYIVPDSTQLMLLLATGLFASVGQFGITYAYKYSKATEVS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I Y+A + I+ + D + + I++ + Y
Sbjct: 236 IYNYSAIVFGIILGFIFFHEIPDMLSLLGGAIII-GIAYYTF 276
>gi|325954598|ref|YP_004238258.1| RarD protein, DMT superfamily transporter [Weeksella virosa DSM
16922]
gi|323437216|gb|ADX67680.1| RarD protein, DMT superfamily transporter [Weeksella virosa DSM
16922]
Length = 308
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 105/295 (35%), Gaps = 9/295 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
Y LWG + + +E++ +R+ +S + + L
Sbjct: 7 LFAAILTYFLWGFFSFGLRPISDYPSMEILYYRLFFSTILLLLVGCFLRRKKIEADYQLY 66
Query: 87 NPKAVGMLVFSATILA-------VHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ L +W FIY + S SY + PVI+ L + L
Sbjct: 67 RSLSKKEQNQMVIRLFGSSIVLMFNWLAFIYVMNHVSVQTASLSYLICPVITTLLSVLIL 126
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+ + + A L + +IM L + V S + + + F +
Sbjct: 127 KDHIGREKWFAIGLSTFACIIMAFGHFRELYYS-LFVALSFSIYIIIQKRLNRFDSFSLL 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M L I ++ + + G+ E F + L + ++ +K STV
Sbjct: 186 MLQLTIVSVLIMPFYGW-KSEPFPTETRFYKSIALVVILFTIIPMILNNFALKGIDSSTV 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
GI+ Y P++ + +VF K+ + + I + ++ ++++++ + K +
Sbjct: 245 GILIYLNPIINFLLAVFYYKEAVSLEQIIAYSLIFLSILLFNSRNLKQIFDQKNR 299
>gi|312883644|ref|ZP_07743369.1| RarD protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368867|gb|EFP96394.1| RarD protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 299
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 64/286 (22%), Positives = 136/286 (47%), Gaps = 1/286 (0%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+++LWG+ PLY QFL E++S R++ +LP F ++ ++ ++
Sbjct: 13 FSFVLWGLLPLYYQFLPGAVPDELLSIRLIATLPLTFILVLVIKRRAPSFTKLTRDMSSL 72
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
++ +++ W F +AL + + S +F++P+ + LG FLKE+L Q +
Sbjct: 73 YFTFAASITMSISWVAFTWALTSERVIEASLGFFISPITMMLLGVFFLKEKLTFSQKLTL 132
Query: 152 LLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
LL +H IP +S+ +A+ ++ Y + +K SEG F+E VL AL Y
Sbjct: 133 FFACSGLLYQVIHYQAIPFISITMAIFFTLYGWCKKKSKYSWSEGLFVEAVVLFPFALIY 192
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+++ + G + D IG ++ +S I++ +ST+G+M+Y P +
Sbjct: 193 LIYKDQNYGLSITDAHFLDLFLYIGSAIVTLLPLIFYSIAIRQTPISTIGLMQYIEPSIQ 252
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++++ + D ++ + FG++ + + ++ + ++
Sbjct: 253 FFLAIYLFSEAFDQIKAVSFGLIWFGLSLTIIGEMRTMKSPSLNRN 298
>gi|99078732|ref|YP_611990.1| hypothetical protein TM1040_3761 [Ruegeria sp. TM1040]
gi|99035870|gb|ABF62728.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 318
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/288 (15%), Positives = 102/288 (35%), Gaps = 7/288 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M AY ++ + +F+ +VS +++ L S P + IV
Sbjct: 2 NMKAAFMALLAYGIFSTHDVVVKFISAEVSAFQIVFFSSLLSFPLLTLMIV------KDA 55
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P G + + ++A+ G YA T F TP + L L E
Sbjct: 56 TPGTFRPNQPGWVALRSLMMALIPGCAFYAFSVLPLAQTYALLFATPFLITLLSIPMLGE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ ++ A ++ +L++ G L +A +A+ A +++ + +
Sbjct: 116 KVGLPRMAAVIVGFAGVLVVLRPGGTELGLGHVAALLAAFGNAFQSVILRKLRHTERRVV 175
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ P L VV G + + + L + + + + + V
Sbjct: 176 LMLFPILTTVVIMGLTMPFVYVPLSGTQMGGLAIISVFGFCATLLLVFSYSIGESAVVAP 235
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
M+Y+ + IV + + +D + + GI++ + V ++
Sbjct: 236 MQYSQIIWAIVFGALLFDETVDLLTILGAGIIIASGVFIVMREARGGR 283
>gi|187921670|ref|YP_001890702.1| RarD protein, DMT superfamily transporter [Burkholderia
phytofirmans PsJN]
gi|187720108|gb|ACD21331.1| RarD protein, DMT superfamily transporter [Burkholderia
phytofirmans PsJN]
Length = 298
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 58/289 (20%), Positives = 109/289 (37%), Gaps = 4/289 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSL 80
G CA + + Y L +S L++ + RV+W++PG + L
Sbjct: 7 RRGIALSVCATTTFALLSAYATLLAPLSGLDIFAWRVIWTVPGALLLVALRKRLPILRRL 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + PK ++ SA +L V F++A L + S YF+ P+ V +G +
Sbjct: 67 LYRMVTEPKLGMAMIVSAALLGVQLWVFLWAPLHGRMLEVSLGYFLMPLTMVLVGRFYYH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ LQ +A + +G + F + S F
Sbjct: 127 ERLDGLQWLAVACAATGVGHELWVTGAFSWPTLLVSLGYPPYFVLRRKINHDSLAMFTVE 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +P +V+NG S L L++ + + ++ G
Sbjct: 187 MALLLPPAIALVFNGGSLAMIAGHPGRWWLLLPGLG-ALSTIALASYLKASRLLPVALFG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ Y P+L+++ S+ +L + + + + + IA+ + L +V
Sbjct: 246 ILGYVEPVLLVLISITVLGETLSVSQLATYVPIWIAVALTALHSVRLVR 294
>gi|303246760|ref|ZP_07333037.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
gi|302491777|gb|EFL51657.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
Length = 299
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 96/294 (32%), Gaps = 12/294 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L+V CA LWG+ ++ + +EV R + ++
Sbjct: 1 MAGYLYVLCAASLWGLIGPLSKLSFAAGMDTVEVAFWRTT------LAWFCFAGQAIANK 54
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + F +A +G ++ A+ L S + P L FLKE
Sbjct: 55 EVRIAPRDLPAVAGFGVCGIAGLFGAYVVAVDAGGAALASVLLYTAPAWVALLSWFFLKE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ A + I+ + ++L G + I + G
Sbjct: 115 PMGGYKVAAVVATIVGVAGVSLGPGASGHTAIGSKAIVFGLLSGITYALYYIFGKYYLGR 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + AL L L + I+ G++R + +
Sbjct: 175 YRTPTLFLYALPVGSLTLLPFVHFTRPTLAGAVPCLALALLSTYSAYSIYYAGLRRLEAT 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P++ + + + + D V + G+++ ++++ + ++
Sbjct: 235 RAAVVATMEPVIAAILAYTMFGERFDLVGYLGAGLILASVLMTIWDGARQRFRS 288
>gi|119471822|ref|ZP_01614155.1| putative permease [Alteromonadales bacterium TW-7]
gi|119445312|gb|EAW26601.1| putative permease [Alteromonadales bacterium TW-7]
Length = 288
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 110/293 (37%), Gaps = 9/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P +++ A +L+G T L+ + + ++ L++ +R + + + + + L
Sbjct: 2 QPQQQSLIYLHIAVLLFGGTALFAKLI-GLNALDITVYRTAIAGMAILAMLSFGKKQIKL 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
NPK + +F + +HW + + + ++F PV++VFL +F K
Sbjct: 61 -----NNPKDYLIALFLGVTVGLHWVTYFAGMQMAGITIGMLAFFSYPVMTVFLEPLFNK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ II+A +++L + ++ L + V + + R +
Sbjct: 116 SKPQAKDIISAGVVVLGIYLLVPSADLGDDVTLGVITGVVSALFFSVRNITHKRYFSQYG 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ F + + N L + + + +F+ +K +
Sbjct: 176 GPQTMFYQTLVASIMLCAFIEVPVYEVSNQDLILIAVAGIIFTATPHSLFAASLKHLSAA 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T G++ PL + ++ I+ + + I ++V A + +
Sbjct: 236 TAGLISCLQPLYGTILAIIIVHERPTLMTLIGGALIVSAACFETWSITKKARQ 288
>gi|148556979|ref|YP_001264561.1| transporter DMT superfamily protein [Sphingomonas wittichii RW1]
gi|148502169|gb|ABQ70423.1| RarD protein, DMT superfamily transporter [Sphingomonas wittichii
RW1]
Length = 284
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 67/282 (23%), Positives = 132/282 (46%), Gaps = 6/282 (2%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
AY +WG+ PL+ + L+ + V ++++HRV+WSL + + ++ + P
Sbjct: 1 MGLGAYTIWGLLPLFIRALQAMPVADILAHRVIWSLAVLLVLATAMKR-WTAIRTAIATP 59
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL-NHLQ 147
+ + L+ S ++ +W ++Y++ + Q S YF+ P+++V LG VFL+ERL
Sbjct: 60 RFLLALIASTLLIGSNWMIYVYSINSGQTLQASLGYFINPLVNVLLGVVFLRERLGRPET 119
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ L + G+PL+ L +A T+ Y RK + +G EG IE +L A
Sbjct: 120 LAILLAAAGVAALAIHQGGVPLIPLGLAATFGLYGLVRKIVGLGPVEGLLIETGLLLPIA 179
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + + P ++ GL+ + +F R + S +G+++Y P
Sbjct: 180 L----AWLLTMPNVLARPDAPALWLVLASGLVTTVPMLLFVGAAHRMRYSELGLLQYIGP 235
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
L ++ +V + +P+ + + F ++ + VY+ T
Sbjct: 236 TLQLLIAVAVFGEPLRPIHMLAFALIWAGLAVYVAVTWHRGR 277
>gi|256825932|ref|YP_003149892.1| rarD protein [Kytococcus sedentarius DSM 20547]
gi|256689325|gb|ACV07127.1| rarD protein [Kytococcus sedentarius DSM 20547]
Length = 334
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 71/296 (23%), Positives = 129/296 (43%), Gaps = 10/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P G + F AY+LWG PLY L E+++HRV+WSL ++ L
Sbjct: 18 TRAPAPWGVAYGFGAYLLWGAFPLYFAALAPAGPWEILAHRVVWSLVF-CLLLLGALRQL 76
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + +V + + ++W ++ A+ T + YF+ P+ +V +G V
Sbjct: 77 GALRSLFTPARRAVTMVAAGVTIGINWTIYVAAVTTGHVTEAALGYFMNPLATVIIGVVV 136
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI---PVGSSEG 195
L+E+L +Q +A + ++ + +T+ G P A K V +
Sbjct: 137 LREKLRPMQWVAVAIASVAAVYLTIDYGQPPWISLSLALSFATYGLIKKQVGGKVSAVHS 196
Query: 196 FFIEMCVLAIPALFYVVWNGFSG------GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
E L A+ +VW S + F + L+L G+ + +F+
Sbjct: 197 LTAETIALFPVAVAILVWLALSPAGSTVTHQTFTGHGVDHMLWLASAGIATAIPLLLFAA 256
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
R L T+G++++ P+L ++ V I+ + + R + FGIV +A+VV + TV
Sbjct: 257 AASRVTLVTIGLLQFVTPILQLLVGVTIMGETMPASRWVGFGIVWVALVVLMADTV 312
>gi|240102399|ref|YP_002958708.1| Membrane transport protein [Thermococcus gammatolerans EJ3]
gi|239909953|gb|ACS32844.1| Membrane transport protein [Thermococcus gammatolerans EJ3]
Length = 286
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 98/277 (35%), Gaps = 6/277 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A ++WG ++ + L +S L V RV + + + L +
Sbjct: 8 RGKAQIALAMLIWGSVGIFGR-LSGLSGLGVAFSRVSLGAVVLLPILGLRGKLGNALGEL 66
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K P ++ T LA++W F A Y+ PV++ + FL ERL+
Sbjct: 67 RKRPY---HMLALGTALALNWVFLFTAFNHTTIANAVLVYYTAPVLATLISWRFLHERLD 123
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF--IEMCV 202
++++ + LL++ I L A+ A + + F ++
Sbjct: 124 ARKVLSLAIAFTGLLLIASSQRISLSDRDFIGIVFAFLGALFYALIPNLGRFLRGVDGES 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L L +G+ + + ++ G+K+ ++ ++
Sbjct: 184 LTFLQLAIASAVLIPFVVLENVGSPVWWTIAVLVLVHTVLALYLYMDGLKKVEVKDAALL 243
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL IV + + + I ++++A +
Sbjct: 244 SYLDPLSAIVYAFLVFGEVPGVRTVIGGALILLASAL 280
>gi|254473447|ref|ZP_05086844.1| RarD protein [Pseudovibrio sp. JE062]
gi|211957563|gb|EEA92766.1| RarD protein [Pseudovibrio sp. JE062]
Length = 313
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 152/312 (48%), Gaps = 6/312 (1%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPG 66
+ + + + G + AY++WG P+Y + + + VI +RV+ S+
Sbjct: 1 MSQSASAADQLSTPEAFKAGLIAAISAYLMWGFAPMYYKLTADMPAIIVICYRVIGSVLF 60
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
+ +V S + + + L+ SA++++++W FI+++ T + S YF+
Sbjct: 61 LGAFLV-MSKLRKEVFAIFCDFSRLRYLLVSASVISINWTVFIWSVETGRVLDASLGYFI 119
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFAR 185
P++SV LG V L ERL Q++A + I ++L T G P +S+ +A++++ Y F R
Sbjct: 120 NPLVSVGLGVVLLSERLTKAQMLALAITIFAVLYKTYEVGELPWVSVVLALSFALYGFVR 179
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG----NIPDTLFLIGYGLLNS 241
K PVG+ G +E+ ++ AL + + G + + L+ G++ +
Sbjct: 180 KKAPVGAVAGQLVEVLLVMPFALGGLWYFTAVGSGGIYPTIPTEHPWFLSLLLFTGVITA 239
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+F++ +R + +G ++Y AP + +S++++ + + FG++ ++VV+
Sbjct: 240 VPLVVFAFAARRLPMVYIGFLQYIAPSIHFLSAIWLFGEELSLEGLFAFGMIWFSLVVFS 299
Query: 302 LPTVINSGKNKT 313
+ V+ + +
Sbjct: 300 IDGVMARRRTEK 311
>gi|167622127|ref|YP_001672421.1| transporter DMT superfamily protein [Shewanella halifaxensis
HAW-EB4]
gi|167352149|gb|ABZ74762.1| RarD protein, DMT superfamily transporter [Shewanella halifaxensis
HAW-EB4]
Length = 297
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 62/281 (22%), Positives = 136/281 (48%), Gaps = 1/281 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
CA++ WG+ PLY QF+ +VLE++S R+L+S+P ++ + S ++ + ++N +
Sbjct: 9 AVCAFLAWGLLPLYFQFIPSANVLELLSIRILFSIPCIYLLLKAKSLPMAKIWAAMRNRR 68
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ + + F +A+ Q S YF+ P+ S+ LG +FLK++L+ LQ +
Sbjct: 69 VLLICFLAGIFNLTSLYSFTWAVTNGQVLAASLGYFMNPIFSIALGVLFLKDKLSTLQSV 128
Query: 150 AALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A L I + + L+ G P LS+ + T++ Y +K + + + IE+ ++ AL
Sbjct: 129 AVALSIAGIGLQVLYYGELPWLSIIMGGTFALYGLMKKFVDLDALSIMMIELILMLPFAL 188
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
++ + + + + L + + +FS +++ L +G ++Y P
Sbjct: 189 CLIMSDLWHQTSVLYSDDNSKILLYLLSAPVTLIPLVLFSLAVEKISLIMIGFIQYIEPS 248
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +V I + + V+ F ++ + +++ + V
Sbjct: 249 IQFLLAVMIFGEVLLPVKVASFSLIWLGLLLCIADIVFKKR 289
>gi|323488707|ref|ZP_08093948.1| putative transport protein [Planococcus donghaensis MPA1U2]
gi|323397586|gb|EGA90391.1| putative transport protein [Planococcus donghaensis MPA1U2]
Length = 301
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 102/304 (33%), Gaps = 14/304 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L + LWG+ ++ +L +V LEV++ RVL + + ++ + L
Sbjct: 1 MENKSAWLLIAIGASLWGVIGVFVTYLYEVGFTPLEVVAVRVLTASIFMVPYVLMKNRQL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+K + + + + ++ + + P L +F
Sbjct: 61 FKIKV----KDSKYFIGTGIISIVLFNWCLFSSMRESSISIAFILLYTAPAFVTILSRIF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIPV 190
KE L ++ A L+ ++ ++ S++I + A +
Sbjct: 117 FKEALTARKLTALLVTLIGCSLVIGIFSSSTASISIYGLILGLGSGFFYALYSIFGKAAL 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + V ++G L + L F ++ G
Sbjct: 177 SKYDSLTVTVYTFLFATVAIVPFSGLGSKLSTLTDLKVLGLVIGLGFLSTMLPFIFYTKG 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ + S I+ P++ V FI + + T + + +V+ ++++ + +
Sbjct: 237 LQYVESSRASIIATIEPVVASVVGFFIFNETLSTWQYLGMIMVISSVIIVQESNKQKANQ 296
Query: 311 NKTK 314
+
Sbjct: 297 SPAA 300
>gi|254362545|ref|ZP_04978647.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
PHL213]
gi|153094146|gb|EDN75043.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
PHL213]
Length = 280
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 140/281 (49%), Gaps = 4/281 (1%)
Query: 34 YILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
Y+ WG P+Y + + ++++ RVLWS F ++ F G +++ K PK +
Sbjct: 1 YLTWGTFPIYWYPINQSGMPAEQILAQRVLWSALFAVFLLLIFQQGRAVINAF-KQPKVL 59
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
G+ V S+ ++ V+W +++A++ S YF+ P+ +VF+G + LKE+LN Q++A
Sbjct: 60 GLFVLSSFMIGVNWLVYLWAIVNEHILDASLGYFINPIFNVFVGRLILKEQLNKAQLLAL 119
Query: 152 LLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
L I +L + + +G P ++L +A ++ Y RK P+ G +E +++ A+ Y
Sbjct: 120 LFAISGILWLAIPAGQIPWVALILAASFCIYGLIRKLAPMEPLSGLALETLLMSPFAITY 179
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ + F N L+ G+ + F+ G +R +S +G+++Y +P L
Sbjct: 180 LCFCYHQNILVFSELNPLQMAVLLCSGIATTLPLLWFAMGARRISMSLLGMLQYISPTLQ 239
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ V I + + R + + +V I + V+LL K
Sbjct: 240 FLCGVLIFNETLSAERAVGYILVWIGVGVFLLGMKKAGVKR 280
>gi|332531973|ref|ZP_08407857.1| permease [Pseudoalteromonas haloplanktis ANT/505]
gi|332038600|gb|EGI75043.1| permease [Pseudoalteromonas haloplanktis ANT/505]
Length = 288
Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 109/293 (37%), Gaps = 9/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P +++ A +L+G T L+ + + ++ L++ +R + + + + + L
Sbjct: 2 QPQQQSLIYLHIAVLLFGGTALFAKLI-GLNALDITVYRTAIAGMAILAMLYFQKKQIKL 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
PK + +F + +HW + + + ++F PV++VFL +F K
Sbjct: 61 -----NKPKDYLIALFLGVAVGIHWVTYFAGMQMAGITIGMLAFFSYPVMTVFLEPLFNK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
R II+A +++L + ++ L + V + + R +
Sbjct: 116 SRPKAKDIISAAVVVLGIYLLVPSANLGDDVTLGVITGVISALFFSIRNITHKRYFSQYG 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ F + + N L + + + +F+ +K +
Sbjct: 176 GPQTMFYQTLVASIMLCAFIEVPVYEVSNHDLILIAVAGVIFTATPHSLFAASLKHLSAA 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T G++ PL + ++ I+ + + + ++V A + +
Sbjct: 236 TAGLISCLQPLYGTILAIVIIHERPTIMTLVGGALIVSAACFETWSITKKARQ 288
>gi|189468344|ref|ZP_03017129.1| hypothetical protein BACINT_04741 [Bacteroides intestinalis DSM
17393]
gi|189436608|gb|EDV05593.1| hypothetical protein BACINT_04741 [Bacteroides intestinalis DSM
17393]
Length = 311
Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 103/304 (33%), Gaps = 15/304 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + A +G+ PL+T L E ++ V+ R L+++P + +
Sbjct: 2 NTKVKGYILGAVAAATYGMNPLFTLPLYREGMNPDSVLFFRYLFAIPILGIMLKARGRSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
SL + + ++A+ + + + S FV P++ + +V
Sbjct: 62 SLKRKEILPLVI------LGWLVAISSLTLFQSYNYMEAGIASTILFVYPILVALIMAVA 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVG 191
KE++ ++ L + + ++ L +A A++++ Y +
Sbjct: 116 FKEKVTLQTVLCIFLALSGIGLLYKGGDGTTLSLVGVGLVMASALSYAIYIVGVNRPILK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ VL ++V F H + + F + +
Sbjct: 176 DVATLKVTFYVLLFGLSLFLVRVDFGQSLHVVDKWYLWGNLIALAIFPTAISFLCTTQAV 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + I+ P+ + V I + + ++++A+ + + I +
Sbjct: 236 QYIGSTPTAILGALEPVTAVFFGVTIFGESLTPRLCCGIVLIIMAVTFIIAGSNITTHLV 295
Query: 312 KTKK 315
+ +K
Sbjct: 296 RFRK 299
>gi|254456064|ref|ZP_05069493.1| RarD protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207083066|gb|EDZ60492.1| RarD protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 292
Score = 85.3 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 137/282 (48%), Gaps = 4/282 (1%)
Query: 25 MGTLFVFCAYILWGITP-LYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L WG LY +++ + +E++ HR LW+ + + +FS + +
Sbjct: 7 KGLLLAGFGSFWWGFIGVLYFKYIAYIGHVELVVHRCLWTTFTLIISTFFFSK-WDIFFN 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+KN K + L FS ++ ++W +IYA+ T + SF YF+ P++SV LG +F KE+L
Sbjct: 66 IIKNKKYLIYLFFSGLLIFINWAVWIYAIATDRIIDASFGYFMMPILSVLLGYIFFKEKL 125
Query: 144 NHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
N +I + +L+I S+L + L S +P + L +A++W Y RK I + + G IE
Sbjct: 126 NKKRIFSIILVIFSILYLILVSFKSLPWVGLIVALSWGFYNLIRKKINIDTDIGLLIESL 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A + F L N P LF+ G + ++ G++ + L G+
Sbjct: 186 YILPFAALAFYLIASNNHNDFQLSNPPMMLFIFLAGPMTVIPLFLYVRGVELSGLGPTGM 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ Y P L + F ++P + + F + IA+++YL
Sbjct: 246 IFYITPTLQFLLGFFYYEEPFSITKLVSFIFIWIAVIIYLKD 287
>gi|326440000|ref|ZP_08214734.1| hypothetical protein SclaA2_02990 [Streptomyces clavuligerus ATCC
27064]
Length = 391
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 80/277 (28%), Gaps = 7/277 (2%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F + ++WG + L + E + +V R+ + + A+ L +
Sbjct: 43 FAVLS-LVWGFSFLLIKVGTEGYAPFQVTFGRLFFGTAVLAVAMAVRRDRLPRGIRVWAH 101
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L+ + + + + + V L R
Sbjct: 102 LTVAALLLNAVPFSLFAYAELTIPSTLAGICNATSPLWGMLLSLVALSEDRPTRRRVAGL 161
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCV 202
+ L ++ L SG+ + A+A+ S + G +
Sbjct: 162 GVGFLGVLTVLGAWQGFSGLDVRGTALALLASFCYPVGWIYVRRTLAGREESHLSLTGAQ 221
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + V +P + L F + ++ +T ++
Sbjct: 222 LLLATVQLAVVTPLFTELPSSFAPVPLLAVVALGVLGTGFALLVQYGLVEEVGPTTATMV 281
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P++ + V +L + + + IV+ +
Sbjct: 282 TYFIPVIATAAGVALLGEQLSWNTPVGAAIVLAGAAL 318
>gi|326560102|gb|EGE10492.1| RarD protein [Moraxella catarrhalis 46P47B1]
gi|326560485|gb|EGE10867.1| RarD protein [Moraxella catarrhalis 7169]
gi|326561689|gb|EGE12026.1| RarD protein [Moraxella catarrhalis 103P14B1]
gi|326564181|gb|EGE14417.1| RarD protein [Moraxella catarrhalis 12P80B1]
gi|326570436|gb|EGE20476.1| RarD protein [Moraxella catarrhalis BC8]
gi|326573413|gb|EGE23381.1| RarD protein [Moraxella catarrhalis 101P30B1]
gi|326575691|gb|EGE25614.1| RarD protein [Moraxella catarrhalis CO72]
gi|326577157|gb|EGE27051.1| RarD protein [Moraxella catarrhalis O35E]
Length = 295
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 62/290 (21%), Positives = 137/290 (47%), Gaps = 3/290 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G L V A+++WG PLY + L + +E+I HRV+W+ + +
Sbjct: 6 TTTPKGLLTVLSAFLIWGCFPLYFKELIEYDAIEIIVHRVVWTFVILLGITIITRR-FRW 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K PK + + ++ ++A +W +++A+ Q S YF+ P++ V + K
Sbjct: 65 IDQIKKQPKWLFLTFLASVLIATNWLVYVWAVTHDQVLEASLGYFIHPLVGVLFSMLIFK 124
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L +Q +A LL ++ I + G+P +S+ + ++W Y ++ P + +G F+E
Sbjct: 125 EKLRLMQKLAVLLAAAAVGIQIVWMGGLPWVSMLLPLSWGLYGVIQRQTPFDALDGLFLE 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L +L ++ ++ + F + L+ G + +++ K + +T+
Sbjct: 185 TALLVPISLIWLQFSHVASSSMAFWVSSEIW-LLMLAGPVTLVPLLLYNISTKLVQFNTL 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ Y P L+ + ++F +P D R +VF ++ + ++++ +
Sbjct: 244 SFLNYLTPSLIFLLAIFYYHEPFDAKRLLVFVLIWVGLLMFSADMFKHKK 293
>gi|254181286|ref|ZP_04887883.1| putative membrane protein [Burkholderia pseudomallei 1655]
gi|184211824|gb|EDU08867.1| putative membrane protein [Burkholderia pseudomallei 1655]
Length = 356
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + + +G ++ ++ VL ++ R + +
Sbjct: 7 SSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 RWP------RGRALAAIVGMGALGYVSQSLCYFSALQHAQASLVALLLYLYPAFVALLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 121 WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFS 248
V I + + P + + F
Sbjct: 181 DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAG 296
Score = 44.5 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAAIVGMGALGYVSQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|163757690|ref|ZP_02164779.1| hypothetical protein HPDFL43_19807 [Hoeflea phototrophica DFL-43]
gi|162285192|gb|EDQ35474.1| hypothetical protein HPDFL43_19807 [Hoeflea phototrophica DFL-43]
Length = 312
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 3/289 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L V A I+W + LE +++ R +++ + +++ G +
Sbjct: 20 ENRRGVLLVLGAAIIWSFGGAIARGLETGDPWAIVAWRSIFAALFLLAFMLWRDGPTGTI 79
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ V A F+ AL P+I+ LG +FL+E
Sbjct: 80 RLF---RTMGLPGVGVGLCFATASMSFVVALGYTSVANILLMQAGAPLIAALLGVIFLRE 136
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + A L +I + +M S +S V + + M
Sbjct: 137 AVDRVTWAAILAVIAGVGVMVSDSFAANVSFIGDGLALLIAVVFAAATVITRRYSDVRMT 196
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ G S + + L ++ +F G + + +
Sbjct: 197 PAVCLGVIIGAAFGISLAQTLVVSIRDLGLLVLFGAFNLGLGLAMFVTGARLIPSALAAL 256
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ + + + + + +V +A++ ++L S +
Sbjct: 257 ISTMEPVFGPIWVWILHSEVPASRTLVGGVMVFLALIGHILWQWHKSRR 305
>gi|254491716|ref|ZP_05104895.1| RarD protein [Methylophaga thiooxidans DMS010]
gi|224463194|gb|EEF79464.1| RarD protein [Methylophaga thiooxydans DMS010]
Length = 295
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 3/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M G + AY +WG+ PL+ +L VS +EV+SHR++WSL + G L K
Sbjct: 1 MQGLMLAVLAYSIWGLFPLFFSYLNHVSPVEVLSHRIIWSLVATLSLSLLLLRGRLLAKA 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + V S +AV+W +I+A+ + S YF+ PV+S+ +G + LKE L
Sbjct: 61 LQDKTTLIWLGVSSLL-IAVNWLVYIWAVGQHRVLEASLGYFIMPVVSLLMGRILLKEPL 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ LQ A L +++++ G P + + +A + Y RK P+ G IE
Sbjct: 120 HPLQAWAGGLALIAVMWELWIFGTLPWVGVVLAFAFGFYGLVRKVHPIDGLNGLTIETLW 179
Query: 203 LAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L AL ++ W F+ G + TL LI G L + +F+ +R LS VG
Sbjct: 180 LLPLALGFIAWQLFTSDSQMGFGLDNQTTLLLICSGFLTALPLVLFAMATRRINLSIVGF 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P + + VF+L + R + F +V +A+++++ + ++
Sbjct: 240 IMYINPTIQFLIGVFVLDEHFPEARLVTFILVWLALLLFVSGLWQMQRQKQSS 292
>gi|253681162|ref|ZP_04861965.1| putative membrane protein [Clostridium botulinum D str. 1873]
gi|253563011|gb|EES92457.1| putative membrane protein [Clostridium botulinum D str. 1873]
Length = 297
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 101/288 (35%), Gaps = 13/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G ++ + +G P++ + V++ R L + +F +
Sbjct: 1 MKRINGIIYALLSSTAFGFMPIFAKIAYNHGSNCFTVLTFRFLIAALLLFVYFLIKKVNF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +K G L +++T + + + L + +FV P + + +
Sbjct: 61 KVNRQQMKLLFLTGSLGYTSTGIGL-----FLSYKYISVGLATTMHFVYPAAVILMSYII 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
KE ++IA +L + + ++ G + L +T++A +
Sbjct: 116 YKEGFTKNKVIALILSLAGVCVLAGEKGQHISPLGAFLAILSGLTYAACIIVMNKEELKK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + ++++ + + L + +F +K
Sbjct: 176 LNNTIVVFYFSLFSGIAMLIFSLITKTLILNFNFYITSSILGISIISTIISTILFIKALK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S+ I+ P++ I+ + + K+P+ I +++ ++++
Sbjct: 236 IIGASSTSILATCEPIVSIIMGILLFKEPLTISLVIGTILILFSVIIL 283
>gi|254392067|ref|ZP_05007257.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294811429|ref|ZP_06770072.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|197705744|gb|EDY51556.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294324028|gb|EFG05671.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 388
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 80/277 (28%), Gaps = 7/277 (2%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F + ++WG + L + E + +V R+ + + A+ L +
Sbjct: 40 FAVLS-LVWGFSFLLIKVGTEGYAPFQVTFGRLFFGTAVLAVAMAVRRDRLPRGIRVWAH 98
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L+ + + + + + V L R
Sbjct: 99 LTVAALLLNAVPFSLFAYAELTIPSTLAGICNATSPLWGMLLSLVALSEDRPTRRRVAGL 158
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCV 202
+ L ++ L SG+ + A+A+ S + G +
Sbjct: 159 GVGFLGVLTVLGAWQGFSGLDVRGTALALLASFCYPVGWIYVRRTLAGREESHLSLTGAQ 218
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + V +P + L F + ++ +T ++
Sbjct: 219 LLLATVQLAVVTPLFTELPSSFAPVPLLAVVALGVLGTGFALLVQYGLVEEVGPTTATMV 278
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P++ + V +L + + + IV+ +
Sbjct: 279 TYFIPVIATAAGVALLGEQLSWNTPVGAAIVLAGAAL 315
>gi|76809571|ref|YP_332745.1| transporter [Burkholderia pseudomallei 1710b]
gi|126455027|ref|YP_001065461.1| hypothetical protein BURPS1106A_1182 [Burkholderia pseudomallei
1106a]
gi|242316988|ref|ZP_04816004.1| putative membrane protein [Burkholderia pseudomallei 1106b]
gi|254258494|ref|ZP_04949548.1| putative membrane protein [Burkholderia pseudomallei 1710a]
gi|76579024|gb|ABA48499.1| transporter [Burkholderia pseudomallei 1710b]
gi|126228669|gb|ABN92209.1| putative membrane protein [Burkholderia pseudomallei 1106a]
gi|242140227|gb|EES26629.1| putative membrane protein [Burkholderia pseudomallei 1106b]
gi|254217183|gb|EET06567.1| putative membrane protein [Burkholderia pseudomallei 1710a]
Length = 356
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + + +G ++ ++ VL ++ R + +
Sbjct: 7 SSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 RWP------RGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 121 WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFS 248
V I + + P + + F
Sbjct: 181 DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAG 296
Score = 44.1 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|313901665|ref|ZP_07835098.1| protein of unknown function DUF6 transmembrane [Thermaerobacter
subterraneus DSM 13965]
gi|313468065|gb|EFR63546.1| protein of unknown function DUF6 transmembrane [Thermaerobacter
subterraneus DSM 13965]
Length = 324
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 91/279 (32%), Gaps = 3/279 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G +V A LWG + + + EV+ R + L++
Sbjct: 3 LRGMAYVLAAAALWGTLGVVARLAYAGGAQPGEVVFFRAAIAFVLALAVARRQGVALAVP 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ A G + L+ W + + L + FV + +FLG
Sbjct: 63 RRRWLLLGAYGTISVGLFYLSYFWAVRMLPVAVAAVLLYTAPVFVALLARLFLGETLGLR 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-SAYCFARKTIPVGSSEGFFIEM 200
RL L + A ++++S + +++ + A + + + + +
Sbjct: 123 RLLALAVALAGVVLVSAPDPSAGIRWGGVAVGLLSGLTYALYSIFGKVALRDLDPAAVVV 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L I +L + L+ + +++ G++ ST
Sbjct: 183 YTLGIGSLVLLAALPPGRLLDLAWSPAVWWWVLLLGVGPTFLAYRLYTAGLQWVPASTAS 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ P++ + +L + + + +V++A +
Sbjct: 243 IVATVEPVVAALLGWLVLGESLSAGQGAGAVLVLLAGWL 281
>gi|253579466|ref|ZP_04856736.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849564|gb|EES77524.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 291
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/296 (8%), Positives = 73/296 (24%), Gaps = 8/296 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + + + + + + +E R L + +
Sbjct: 2 KQENYIKGMIMIILSAFFFACMNVSVRLAGDLPSVEKSFFRNLVAAVFAAIILRKNRTVP 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + + YA+ S ++P ++ +
Sbjct: 62 KVDKKYWGPLILRCVC------GTLGILCNFYAIDHLLVADASILNKLSPFFAIIFSFLL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE++ Q L + L + + + A + G
Sbjct: 116 LKEKIRPAQAACVALAFIGCLFVVKPGFQNAALVPALIGVCGGLGAGIAYTMVRVLGTHG 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL--LNSFVFCIFSYGIKRAKL 256
+ + + + + + + A
Sbjct: 176 VKGPVIVFYFSFFSCLSVVPWMLSHFTPMSMKQLVTLLMAGLFAAGGQFTITAAYTYAPA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ I +Y+ + + + + D + ++++A + L + + K
Sbjct: 236 GKISIFDYSQIIFATMLGFILFGEIPDKYSFTGYVLIILASLGTFLYNMRVAKAGK 291
>gi|291086855|ref|ZP_06571699.1| membrane protein [Clostridium sp. M62/1]
gi|291077158|gb|EFE14522.1| membrane protein [Clostridium sp. M62/1]
Length = 354
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 90/296 (30%), Gaps = 11/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
T+ G L ILWG + QFL E V + R+L++ +
Sbjct: 56 TQPNTLRGILSALAGGILWGFSGTCGQFLFSFEAVDPSWLTVTRMLFAGIVLLAVSFPGH 115
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
T K+ + +L+FS L ++ A+ + ++ P + + +
Sbjct: 116 RTAMKGILTEKS-SLIRLLLFSVLGLTTCQLTYLTAISYSNAGTATVLQYLGPALIMVVS 174
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ + ++ A +L + ++ H LS ++ + +
Sbjct: 175 CFLARRLPSGKEVFAIVLAVSGTFLLATHGKPDSLVISPEGLSWGLSSAVALVLYTMLPG 234
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G + + ++ + L + F ++
Sbjct: 235 SLIARWGSTVVTGYGMLIGGIFLFFLTGYWNYRISFSPAMVMGVAAIVVLGTALAFTLYL 294
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ ++ P+ V S L TV ++V A+++
Sbjct: 295 QGVSDIGSVKASMLACIEPVSATVISALWLHTSFTTVDIAGLALIVTAVLMLSRKG 350
>gi|167629068|ref|YP_001679567.1| integral membrane protein duf6, putative [Heliobacterium
modesticaldum Ice1]
gi|167591808|gb|ABZ83556.1| integral membrane protein duf6, putative [Heliobacterium
modesticaldum Ice1]
Length = 312
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 100/297 (33%), Gaps = 14/297 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + WGI+ + + + +V + + R + + ++ A+ G L K
Sbjct: 10 LAMLVTVLFWGISFISIKIAVTEVPPVTLALLRFVIASAILWGALRLSEPGAKLEKADRL 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
A + ++ F + S + PV+S+ L V K R++ +
Sbjct: 70 RMLLA-----GALGVTFYFYFENSGVKLTTAANASLITSIVPVLSIMLDIVIYKTRVSVI 124
Query: 147 QIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
Q +A ++ + +G L + + + + G +
Sbjct: 125 QWMAIAASLVGTYLSVTANGQMDLSSDTFVGNLLVLGAMLCWAGYTLMSKSLARYSGLAL 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L V + + F L ++ + ++ Y ++R ++
Sbjct: 185 TTYQTLLGTLLLVPLSLLEREQWEFFSLTAFYHTLFLALCCSALCYFLYMYALQRLDVTI 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ P++ ++ +L + + V+ +V++++ + + ++ +
Sbjct: 245 TTLYLNVVPVVGVLCGYLLLDERVLPVQIAGGAMVILSIFLVNWEKGRSQTESAVAE 301
>gi|160932129|ref|ZP_02079520.1| hypothetical protein CLOLEP_00963 [Clostridium leptum DSM 753]
gi|156868731|gb|EDO62103.1| hypothetical protein CLOLEP_00963 [Clostridium leptum DSM 753]
Length = 298
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 110/295 (37%), Gaps = 2/295 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L + A +L+GI P+ ++ L E ++ ++ R +S ++
Sbjct: 2 MKGYLAIIAASLLYGIMPVLSKLLLLEGMNSSSIVVWRFCFSTVFCLAIMLIKKIPFQAT 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ VG+L F T V + + F S+ FV ++ +
Sbjct: 62 PRQIGVMIVVGILGFGMTATLVTAAYNYIPVGLATMFQFSYPLFVLIIMVILTKEKIGAL 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R + +A L+++ + L+L VT++ Y + + +GF
Sbjct: 122 RAVAVAFLAVGLVLMMDFSGGANYTGIALALLSGVTYAFYVVSNQRSCFRMLDGFTTMFY 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++F+ + + SG L +I F + YGI S I
Sbjct: 182 AMVASSIFFTLQSLVSGQLMAPPTPKSWLLAMIIGLFCTVFSLRLLLYGISVLGASNASI 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ PL ++S I + I G+V++A+++ L I+ K K +K+
Sbjct: 242 LNILEPLTSLISGALIYGDQLSIPTMIGCGLVILAILLVSLAGKISQNKTKQRKN 296
>gi|94309735|ref|YP_582945.1| hypothetical protein Rmet_0790 [Cupriavidus metallidurans CH34]
Length = 532
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 85/291 (29%), Gaps = 16/291 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G +L+ + + + V + VI+ R+L+++P + + L
Sbjct: 242 QRVGLAVAAIGAVLFSAKAIVAKLMYRYNVDAVMVITLRMLFAVPLFMAIGWWQARKLPA 301
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + ++ + L L F+TP + ++ +
Sbjct: 302 LSWADRGR----VVFLGFIGYYLSSFLDFIGLQYITASLERLILFLTPSFVLLTTALVFR 357
Query: 141 ERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPV 190
+ Q I+ LL + ++++ H G L+ + + + +
Sbjct: 358 RPIAARQWISLLLAYVGIVLVFAHDLDVSGPQVWLGGALVLGSAMSYGVYLILSGELVQR 417
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S ++ L ++ +
Sbjct: 418 VGSLRLVAYAMCVSTFCCVVQYLALGRPIAELAQPAPVMWLSVVNAVFCTVLPVSLTMIA 477
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ R P+ ++ + ++L +PI V+ I +V+ M +
Sbjct: 478 VARIGAPMASQAGMIGPVSTLLLAFWLLGEPISGVQMIGSALVLGGMYLLS 528
>gi|167755755|ref|ZP_02427882.1| hypothetical protein CLORAM_01270 [Clostridium ramosum DSM 1402]
gi|237734722|ref|ZP_04565203.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167704694|gb|EDS19273.1| hypothetical protein CLORAM_01270 [Clostridium ramosum DSM 1402]
gi|229382050|gb|EEO32141.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 300
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/288 (9%), Positives = 83/288 (28%), Gaps = 15/288 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G+ + A ++WG + + + ++ ++ ++ R + + +
Sbjct: 1 MKSDKFKGSFLLLLAALIWGSSFIVMKSAVDFLTPNVLLFVRFTLATLVMIIMFYKYIKD 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + T L + + L +F + I FL +
Sbjct: 61 TCIRDLK--------GGAITGTCLFLAYLIQTLGLTMTTPGKNAFLTAIYCAIVPFLVWL 112
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK------TIPVG 191
F +R ++ +AALL + + +++L + + + + + +A
Sbjct: 113 FYHKRPDNYNFVAALLCVSGVALVSLDGDLTMNTGDLLTICGGFFYALHILAIKKYSQEM 172
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + + + + G
Sbjct: 173 HPIKLTTLQFGMTAILALFGSLLFEDITVIKQIDSSVILQIGYLVFFATALTLLCQNIGQ 232
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ + ++ SV + + + F I+ +A++V
Sbjct: 233 NLVSECNAAILLSLESVFGVIFSVLLYGEVLTLKVIAGFVIIFVAIIV 280
>gi|206901226|ref|YP_002250362.1| membrane spanning protein, putative [Dictyoglomus thermophilum
H-6-12]
gi|206740329|gb|ACI19387.1| membrane spanning protein, putative [Dictyoglomus thermophilum
H-6-12]
Length = 286
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 94/289 (32%), Gaps = 13/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++G + V A + W I+ ++ L+ +S E+ R + +
Sbjct: 1 MKRIIGLILVIIACLFWSISFSVSKILLKTLSPFELAFIRFFLASIFSLIVFL-----PK 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + + + + +++ F L + P + + +
Sbjct: 56 IKKASFNRKYQKPLFIAGLFGVTLYFIFENTGLKFTDASEGALIVGSFPALGLLTEYILH 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA-------VTWSAYCFARKTIPVGS 192
KE+L +I+ LL I + ++ SG+ L + S + + V
Sbjct: 116 KEKLPLNRILGVLLSISGVFLIMSDSGLNLKFNNLFGDFLILLSGVSWVIYNWEIKKVNQ 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I I + G + + ++YG+K
Sbjct: 176 KYPYEILTTFQMIWGSILFLPFLMFTGLKIPKTLDALIGIFFLSFFCSGLGYLFYNYGLK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+S V + PL + V LK+ + ++ + ++++ + +
Sbjct: 236 TLSVSQVMNILNLIPLFGAIWGVIYLKETLTLIKIVGGILIILGVSLSS 284
>gi|147920413|ref|YP_685812.1| hypothetical protein RCIX1169 [uncultured methanogenic archaeon
RC-I]
gi|110621208|emb|CAJ36486.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 306
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 101/284 (35%), Gaps = 15/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + L Q++ +E+++ R + V + F+ +
Sbjct: 1 MIGLVLVNVFWGASSIAAKEALIQLTPVEIVTVRFAVAFIAVLALALLFNRD----ALNV 56
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ S +++ + + AL+ S + ++ + + G + LKER +
Sbjct: 57 RPADLPVLIFMSVAGVSLQFVLQVMALVYTTVTNFSLLFNLSAIFIMIFGVLLLKERPSG 116
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIPVGSSEG 195
Q + AL+ + ++ L + A+ ++
Sbjct: 117 KQALGALIGFGGVFLIVTGGSGGLSLAHLSGDLLGLASAALFGLYAIASKTVADRYGPLT 176
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + I L V + L + + F IF++G+ R
Sbjct: 177 ILIYTFLFGILGLLPVYYFATPMTPLAALTPLSWASIGFLAVCCSVIAFLIFNHGLSRLP 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ VGI Y +PL + +V +L + + T +V+ + V
Sbjct: 237 SADVGITIYVSPLAGVALAVLLLGETLTTFTIAGAALVMAGLYV 280
Score = 41.0 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 8/128 (6%), Positives = 36/128 (28%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + + I A+ + + + + + +
Sbjct: 6 LVNVFWGASSIAAKEALIQLTPVEIVTVRFAVAFIAVLALALLFNRDALNVRPADLPVLI 65
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
S F + + ++ ++ + + +++ V +LK+ + + I
Sbjct: 66 FMSVAGVSLQFVLQVMALVYTTVTNFSLLFNLSAIFIMIFGVLLLKERPSGKQALGALIG 125
Query: 294 VIAMVVYL 301
+ + +
Sbjct: 126 FGGVFLIV 133
>gi|89067537|ref|ZP_01155050.1| Putative transporter, RhaT family, DMT superfamily protein
[Oceanicola granulosus HTCC2516]
gi|89047106|gb|EAR53160.1| Putative transporter, RhaT family, DMT superfamily protein
[Oceanicola granulosus HTCC2516]
Length = 320
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 91/287 (31%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L A+ ++ + + L S ++++ VL S P ++
Sbjct: 2 SSNLKGALIALLAFGVFASHDVIVKVLGGNYSPVQLVFFSVLLSFPLATITLM------G 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + P + + YA F +P+I L L
Sbjct: 56 DPKPSTLRPVHPYWVGARTVTAVITGLCAFYAFSVLPLAQVYAIIFASPLIITILSIPIL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A ++ + +L++ L +A +A A +I V
Sbjct: 116 GEVVRVRRWMAVIVGLCGVLVVLRPGSTELTLGHLAALVAAISNATTSIIVRRIGSEERP 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ P + + G + + + + +L + + + V
Sbjct: 176 VVLMLYPMVANFLVMGSALYWVYVPMPVEHLGLVAVLSVLGWTGGRLVVSAYSTGEAAIV 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
M+Y+ L + + ID I GI++ + V +L
Sbjct: 236 APMQYSQILWASAYGLLFFNEVIDRPTAIGAGIIIASGVYIVLRESR 282
>gi|210622874|ref|ZP_03293397.1| hypothetical protein CLOHIR_01345 [Clostridium hiranonis DSM 13275]
gi|210153979|gb|EEA84985.1| hypothetical protein CLOHIR_01345 [Clostridium hiranonis DSM 13275]
Length = 300
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 103/295 (34%), Gaps = 6/295 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S + G F+ + + + + + + + R L S + I+ G +
Sbjct: 3 SSNRLKGVFFIILSAAGFAGMSAFVKLAGDLPSFQKVFFRNLVSTVMALYLIIKHKGSFT 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ K +L+ + + F YA+ + ++P + V L +VFL
Sbjct: 63 GKKENRK------LLLMRSLFGTLGVIFNFYAIDKLILSDANMLNKISPFLVVILSAVFL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE++N QI ++ + L + + + + A C A + +
Sbjct: 117 KEKINTKQISMIIIAFIGALFIIKPTFSVQVIPYLIGILGAICAASAYTCLRAIGNKEDY 176
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ ++F +V + + ++++ G+ S + + A +
Sbjct: 177 YTIVFFFSVFSIVSILPIVVMVYEPMTLMQLVYMLMAGVCASIGQFGITLAYRFAPAKEI 236
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I +YT + + S+ I D + + IV A + + + + K
Sbjct: 237 SIFDYTNIIFSAILSIVIFGAYPDRWSILGYCIVFAAALYMFMYNRKLDREERAK 291
>gi|319944930|ref|ZP_08019192.1| DMT superfamily drug/metabolite transporter [Lautropia mirabilis
ATCC 51599]
gi|319741500|gb|EFV93925.1| DMT superfamily drug/metabolite transporter [Lautropia mirabilis
ATCC 51599]
Length = 303
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 4/298 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
GTL Y++WGI PLY L+ + ++++ R++WS I+ L
Sbjct: 7 SSAQKGTLSAIACYLIWGIFPLYWAPLKGLMPADQLLAQRIVWSALFSALLIIGTGK-LK 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L NP+ + ML SA ++++W +++A+ S YF+ P+ +V LG +F
Sbjct: 66 NLYAVFGNPRLLFMLAGSAASISINWLVYLWAVTNGHVLDASLGYFINPLFNVLLGRIFF 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ERLN Q++A L+++ +L + + IP ++L + +++ Y RK P+ + G +
Sbjct: 126 SERLNKPQMVAVALVLVGILWLAIPAGSIPWVALLLTLSFGVYGLIRKLAPLDALTGMAM 185
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPD-TLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E ++ A Y+V+ G + +IG G + F+ +R LS
Sbjct: 186 ETLLMLPLAAIYLVYQGHLNKLVSLGDLSTLPLMVMIGSGAATTIPLLFFAAAARRISLS 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+G+++Y +P + + + + + R I + V + +YL + K
Sbjct: 246 NLGMIQYMSPTMQFLLGLLVFHESFQLSRFIGYVWVWAGVALYLFGIFTAQRAARAAK 303
>gi|56695180|ref|YP_165527.1| membrane protein [Ruegeria pomeroyi DSS-3]
gi|56676917|gb|AAV93583.1| membrane protein [Ruegeria pomeroyi DSS-3]
Length = 347
Score = 85.0 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/320 (13%), Positives = 100/320 (31%), Gaps = 13/320 (4%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWS 63
+ K + ++K S ++ A +L+ + L E++ R L++
Sbjct: 27 SRAKAQGRAMAKPLTSHRPILAVSLKLGALVLFTSMSALIKVLSADFPAGEMVFFRSLFA 86
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+P + ++ L + + G L +
Sbjct: 87 IPVIILWLLARGELRQGLIVK-----KPMGHFWRGVLGTGAMGLTFTGLGLLPLPEVTAI 141
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAV 176
+ TP+ ++ L ++ L E + ++I A L +L +LIM A+ V
Sbjct: 142 GYATPIFTLILAALMLGETIRLVRIGAVALGLLGVLIMLWPRLGTGASLDQAATIGALCV 201
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
+ A I + ++ +L + +G + + LI
Sbjct: 202 LAATVARAFVQIHIRQLVQVDHAAAIVFYFSLTATLLSGLTAFFGWVTPTPEQAAILILT 261
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
GL+ + + + + S + +Y + L I+ + V +V+
Sbjct: 262 GLVGGVAQILVTSSYRFGQASMLAPYDYASMLFAIIIGYIWFDEWPTLVMLAGAMLVIAG 321
Query: 297 MVVYLLPTVINSGKNKTKKS 316
VV + + +S
Sbjct: 322 NVVVIWRERQLGLERGKARS 341
>gi|127513122|ref|YP_001094319.1| hypothetical protein Shew_2194 [Shewanella loihica PV-4]
gi|126638417|gb|ABO24060.1| protein of unknown function DUF6, transmembrane [Shewanella loihica
PV-4]
Length = 305
Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/299 (9%), Positives = 86/299 (28%), Gaps = 12/299 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ S + + + IL G + + + +R+L + ++
Sbjct: 12 SQSPSHLSSQAVMMALGSAILMGTIGALAR-TANLEASIITFYRLLIGAACLIAYMLATG 70
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+L K +LA F++ ++ ++ P++S
Sbjct: 71 KARQILHRPGKRHLFN------GAMLAGFMVFYVQSIGYINMANAVMLIYLAPLVSAIGA 124
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMT-----LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
ERL ++A + ++ ++ + L L + ++ +
Sbjct: 125 HFLFHERLTRQDLLAIGIALIGVVAILPSLESLTGSTAELKGYGFALLALLSYSGFMLIN 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
L + + F+ + +
Sbjct: 185 RRPASASPYQSTLIQLSFGALCLLPFALHQAVMPSLTQWFWLALIGVFPGFLAILFAVKA 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ +T G + Y P+ +++ + + + ++ + G+++ A ++
Sbjct: 245 LRVLPAATFGTLAYIEPVTVVILGWSLFAEHLTPMQLMGCGLIICAGLIQTRKRRRAPR 303
>gi|332669478|ref|YP_004452486.1| RarD protein, DMT superfamily transporter [Cellulomonas fimi ATCC
484]
gi|332338516|gb|AEE45099.1| RarD protein, DMT superfamily transporter [Cellulomonas fimi ATCC
484]
Length = 336
Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 15/304 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G AY LWG+ PLY LE +E+I+HRV+WSL ++ L
Sbjct: 34 GLAAGVAAYALWGVLPLYFPLLEPAGAVEIIAHRVVWSLLFCLLLLLATR-TWPAFVSAL 92
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + +G+L +A +LAV+W F++ +LT + + YF+ P+++V L + L+ERL
Sbjct: 93 RDRRTLGLLALAAVLLAVNWLVFVFGVLTDRVVDAALGYFINPLVTVGLAVLVLRERLRP 152
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
LQ +A +++++T G A + R VG+ G E V
Sbjct: 153 LQWVALGAGAAAVVVITAGYGQLPWIALTLAASFGCYGLIKNRVGRSVGAVPGLAAETLV 212
Query: 203 LAIPALFY-----------VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
LA AL Y +G + + L G++ + +F+
Sbjct: 213 LAPLALGYLVTLAATGTGSFAAHGGWHAVALATSGVVTAVALATSGVVTAVPLLLFNTAA 272
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+R LS +G+++Y AP+L ++ V +L + + R FG+V +A+V+ + V N +
Sbjct: 273 RRMPLSLLGLLQYLAPVLQLLIGVVVLGERMPVARWWGFGLVWLALVLLGVDGVRNRLRV 332
Query: 312 KTKK 315
+ +
Sbjct: 333 RAAR 336
>gi|257063277|ref|YP_003142949.1| predicted permease, DMT superfamily [Slackia heliotrinireducens DSM
20476]
gi|256790930|gb|ACV21600.1| predicted permease, DMT superfamily [Slackia heliotrinireducens DSM
20476]
Length = 312
Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 83/290 (28%), Gaps = 15/290 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LFV A LWG ++ L++ ++ + R L ++ + ++ F +
Sbjct: 20 LFVLLAATLWGTMGIFVHGLDEAGLQTMDKVFLRSLVAVAMIAAYMLAFDRS----AFKV 75
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ L + + P + + E L
Sbjct: 76 RPRDLWCFFGTGICSMVFFNFCYFQTIMHVSMSLAAVLLYTAPAFVLVMSHFLFSESLTG 135
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS---------AYCFARKTIPVGSSEGF 196
+I+ ++ + ++ T G L V F R + G S
Sbjct: 136 RKILVLAIVFVGCVLATGALGGDLSVAPQWVLVGLGAGFGYALYSIFGRFALDKGYSSAT 195
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ A + + L L + + +++ G+K
Sbjct: 196 ITLYTFVFATAGSALGAHPVQDVALVASDGGLFLLILALGLVNTVLPYILYNNGLKHMDT 255
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+ P+ + + + I +V+ +V+ L
Sbjct: 256 GKAAILATIEPVAATLFGIAFFGEVPSLAGVIGMAMVIGGIVLQSLSEGR 305
>gi|116627363|ref|YP_819982.1| permease [Streptococcus thermophilus LMD-9]
gi|116100640|gb|ABJ65786.1| Predicted permease [Streptococcus thermophilus LMD-9]
gi|312277876|gb|ADQ62533.1| Predicted permease [Streptococcus thermophilus ND03]
Length = 294
Score = 85.0 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/290 (18%), Positives = 124/290 (42%), Gaps = 5/290 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS---GGLSLL 81
G LF YI WG L+ + L VS S R+++++ + + L
Sbjct: 6 QGLLFGLATYIQWGFLSLFWKLLAGVSAYNTFSWRIVFTVVTMLTYALVAKQNTRFKKEL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ KA+ ++ ++ +A +W +IYA+ Q S Y++ P++S+ +FL+E
Sbjct: 66 VELWQDKKALLRMLLASFFIAANWLIYIYAVGHGQATQASLGYYILPIVSILFALIFLRE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ A +L + +L++ ++G + + K SS+ +
Sbjct: 126 SLSRTMWAAVVLAFIGVLVLIANTGKLPMVSLGLALSFGFYSLIKKGIRISSDVAMLVES 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P + + + L G++ + FS +KRA L+ +G
Sbjct: 186 GLLLPFVAIYLVFFSPESFSSYSSME--MFLLAISGVVTAVPLLCFSEAVKRAPLNLIGF 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++Y +P + ++ ++ I + + F + +A++V++ ++ ++
Sbjct: 244 IQYLSPTIQLLVAILIFGEKVSFGELKGFFFIWMAILVFVTGQIVTFRRS 293
>gi|160946177|ref|ZP_02093388.1| hypothetical protein PEPMIC_00139 [Parvimonas micra ATCC 33270]
gi|158447700|gb|EDP24695.1| hypothetical protein PEPMIC_00139 [Parvimonas micra ATCC 33270]
Length = 293
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 109/298 (36%), Gaps = 12/298 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G +F + ++G TP+ + + + R L LP + Y
Sbjct: 1 MNFIKGIIFTIISAFVFGFTPILAKLTYDGGNNAITLTFLRALLGLPFL-----YAGMRK 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +V S + + + + + +F+ P + F+ +F
Sbjct: 56 NHTPMKITKREFFHFIVLSFLGIGITTTALYASYNYISVGMATTIHFIYPCVVYFICILF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMT--LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
KE++ ++ A + ++ ++++ + G L A++ Y + +
Sbjct: 116 FKEKITLKKLSALIFSMIGIVLLVDEVTGGSALGIFLAALSGITYSLFLVYLDKSGFKHM 175
Query: 197 FIEMCVLAIPALFYVVWNGF---SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
C L I V SG F L + L ++ L + F G+K
Sbjct: 176 DPFKCTLYISLFNIVGLFVLGKVSGQLTFALTPMAWGLTILISFLTSIFGNAFLQLGVKY 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+T I+ P+ ++ +F L + + + I G++V+A+++ + + +
Sbjct: 236 CGATTASILCTFEPITSVILGIFFLNESMTIFKIIGCGLIVLAVLLLSINKDLRRRRK 293
>gi|295102532|emb|CBL00077.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Faecalibacterium prausnitzii L2-6]
Length = 292
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 100/290 (34%), Gaps = 6/290 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L++ + + + + + ++ +E I R + L I+ G L
Sbjct: 2 TQRQKGALYMILSALCFASMQVVVRLSREIPTMEQIFMRNSFVLIVSAIIILRKKGSL-- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K L + + YA + +P+ L +F+K
Sbjct: 60 ----FGPAKYQPYLFGRSFFGFLGLITLFYASSHAAQGDVTILNKTSPIWVTILAVIFMK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+L +QI A L ++ I+ S + SA + +G +
Sbjct: 116 EKLPKIQIPALALSMVGAFIVFRPSFESNPFPLVVAFLSAVTSGVAYTFLSFFKGKVDGL 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ + F + + + F + + + L+ G+ S +Y + A S +
Sbjct: 176 TVMMHFSTFSAIASIPFMLKDFVVPSFKQAVLLLLIGVFGSLGQAFITYAYRFAPASEIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I Y+ + ++ FIL +P+ I +V A V+ + ++ +
Sbjct: 236 IYNYSGIIFSMILGFFILGEPVKFTSVIGGALVAAASVMVYVYNNRSNKR 285
>gi|260429578|ref|ZP_05783555.1| membrane protein [Citreicella sp. SE45]
gi|260420201|gb|EEX13454.1| membrane protein [Citreicella sp. SE45]
Length = 303
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 100/301 (33%), Gaps = 12/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + G A IL+ + + + EV+ R ++LP + +++ ++
Sbjct: 1 MSPLRGIALKLTAVILFVVMASLVKAASAIPTGEVVFFRSFFALPVIIVWLLWRGDLVAG 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + V + G AL + + P+++V +V LK
Sbjct: 61 LRAN-----RPELHVLRGVVGVGAMGCNFAALTMLPLPEVTALSYAAPLLTVVFAAVLLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC------FARKTIPVGSSE 194
ER+ ++ A +L + ++ A+ A+ A I +
Sbjct: 116 ERVRLFRLSAVGTGLLGVGLVLWPLLTVSRVDDTALVGVAFILTSATLTALVQIHIRRMV 175
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ +L V F+ + + + L+G G+ + + A
Sbjct: 176 RTEQTSAIVFYFSLTSTVLALFTLPFGWVVPTPAEAAILVGAGVFGGIAQICLTSAYRHA 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKT 313
+ + + +Y + L I+ + + +V+ + + L + + +
Sbjct: 236 EATLLAPFDYASILFAILIGYAFFAEVPTVQMILGSSVVIASGVAIVLRERYLGLKRVRA 295
Query: 314 K 314
+
Sbjct: 296 R 296
>gi|312110784|ref|YP_003989100.1| hypothetical protein GY4MC1_1715 [Geobacillus sp. Y4.1MC1]
gi|311215885|gb|ADP74489.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y4.1MC1]
Length = 310
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 97/297 (32%), Gaps = 10/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ G+ F+ A +WG + +++ L+ + ++ R + +F + + +
Sbjct: 2 KNTLFGSFFLSLAASIWGGMYVVSKYVLDFIPPFTLVWLRYAIAFIVLFGVLKFH-EHKT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +++ + + V + TP V L
Sbjct: 61 KMRLSIRKQDWLLLGWIGFIGYFVSISLQFTGTKLSDAHTGALITSATPAFIVLFARFVL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + +A LL + ++I+ SG +L A + +
Sbjct: 121 NEPITLKKAVALLLASIGVVIVIGLDDRGGQSFSGNMMLVGAALTWALLSVYVKVASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S+ + A+ V+ I L + + F +++ G+
Sbjct: 181 SALVITTYAILFALLFTTPVMLWELHEPFVSLPDMIVVFGVLYLGIISTAGAFFLWNKGM 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + PL+ V L++ I + +++I + + ++P +
Sbjct: 241 EMMDAGIGSLFFFFQPLVGAVFGFLFLQEQITASFYLGGLLIIIGVFIAVMPPIHQR 297
>gi|126172797|ref|YP_001048946.1| hypothetical protein Sbal_0548 [Shewanella baltica OS155]
gi|125996002|gb|ABN60077.1| protein of unknown function DUF6, transmembrane [Shewanella baltica
OS155]
Length = 293
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 116/299 (38%), Gaps = 9/299 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G + + A +L+G T L+++ + +S L++ R + + + + L
Sbjct: 1 MSSAKPSGLIELHLAVLLFGGTALFSKLI-PLSALDITFLRCIVAATVLGLLVKLSRKRL 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L + + + + I+++HW + A+ + ++F PV++V +
Sbjct: 60 TL-----ASKQDYLVAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ L +I+ +L+++ ++++ L +AI + + AR +
Sbjct: 115 TGRKIKLLDMISGVLVLIGVILLIPEANLGNDTTLGIAIGIVSAILFTARNLLHKRYFSQ 174
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V + E + L ++ + + +F+ +++
Sbjct: 175 YSGPHAMFYQTLVAVVFLMPWHQTELNSISLEVWGLIILLGVVFTAAPHALFTSALRQLS 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
TVG++ P + ++ IL + ++ I I+V + + + + K
Sbjct: 235 AKTVGLVSCLQPFYGAMLALIILGEELNLNTVIGGTIIVATAIFETHQSHQSQRRKKNA 293
>gi|328956081|ref|YP_004373414.1| protein of unknown function DUF6 transmembrane [Coriobacterium
glomerans PW2]
gi|328456405|gb|AEB07599.1| protein of unknown function DUF6 transmembrane [Coriobacterium
glomerans PW2]
Length = 322
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/311 (10%), Positives = 92/311 (29%), Gaps = 12/311 (3%)
Query: 2 GKGATKKEYSKGLSKENASLPTM-MGTLFVFCAYILWGITPLYTQFL---EQVSVLEVIS 57
G+ + E + + + G L WG++ FL +V +
Sbjct: 13 GEASASVETDRRIRMRAMGDRRLVRGVLATLAGGSFWGLSGTSASFLFAFYKVDTAWLTC 72
Query: 58 HRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
R + + +F ++ L++ + F+ L ++ F+++ +
Sbjct: 73 VRQVLAGL-LFLVVILVRDRRRLIELWTTKRDRRVLYAFTLCGLLLNQFFYLWTVRITNP 131
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---- 173
+ ++ V + V R +I L ++ + +S+
Sbjct: 132 GTATVLQCLSLVFIMAFACVAAHRRPKRREIAGLALAFGGTFLIATGGSLDSMSIPPEGL 191
Query: 174 ---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
+ SA A + + G I + + + L +
Sbjct: 192 VLGLVTALSAASMAIIPVRILPKYGSSIVTGSGMLCSGVVTSAFVQPWRDPPVLDPLGWQ 251
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + + + ++ G+ ++ P+ V+S +L F
Sbjct: 252 ALAVLVVVGSFLAYFLYMQGVTDLGSVRASLLGTVEPVSATVTSAIVLGTVFAPTDIAGF 311
Query: 291 GIVVIAMVVYL 301
+++ + + +
Sbjct: 312 VLIIAMVFLTV 322
>gi|325067084|ref|ZP_08125757.1| transporter DMT superfamily protein [Actinomyces oris K20]
Length = 293
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/284 (21%), Positives = 122/284 (42%), Gaps = 6/284 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
V Y LWG PLY L +E+I HR+LW+L ++ + L ++
Sbjct: 1 MALVVGCYCLWGFFPLYFHLLSAAGSVEIIGHRILWTLVT-CLTLITLRRRWAQLVHVVR 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+P+ +GML +++V+W ++Y + T + + YF+ P+++V L ++ L ERL
Sbjct: 60 SPRLLGMLAVCGLLVSVNWLVYVYGVNTARTADAALGYFINPLVTVALAALVLHERLRPA 119
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI---PVGSSEGFFIEMCVL 203
++ L ++ ++ + G + A K V + G +E ++
Sbjct: 120 HRVSIALAGAAVALLVVLQGSLPWISLVLAFSFALYGLVKKQLGPDVDALTGLTVESALV 179
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKRAKLSTVGI 261
AL Y+ + G + + + + G + + +F+ G +R LS VG+
Sbjct: 180 TPIALAYLGHMAWQGQSAWQAPDQGWWILALLVVAGPVTAVPLLLFAAGTRRVPLSVVGM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+Y AP + + + + I R +V A+ V++ V
Sbjct: 240 GQYIAPTIQFLLAWGAFHERIPPARWAAMILVWAAVAVFIGDAV 283
>gi|298370486|ref|ZP_06981802.1| RarD protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281946|gb|EFI23435.1| RarD protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 303
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 4/302 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
S G ++ F Y+LWG+ PLY + + ++++ R+ WS ++
Sbjct: 2 TRPPSEEYRKGLIYAFSCYLLWGLFPLYWFPITHSGMGADQILAQRICWSAVFSSAVLLL 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
LL+ ++ + + V SA ++V+W +++A+ S YF+ P+++V
Sbjct: 62 MRQAGPLLRAV-RDRRLLLAFVCSAAAISVNWLVYLWAITHDHVLDASLGYFIAPLVNVL 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGS 192
LG +F KE+L +QI A LL + +L + + +G P +SL +A ++ Y RK P+ +
Sbjct: 121 LGRIFFKEKLGFVQIAAVLLAVTGILWLAVPAGRLPWVSLLLAASFGVYGLLRKLAPLDA 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G +E ++ AL Y+ GG F LIG G + +F+ K
Sbjct: 181 LSGMTLETLLMLPFALGYLGLKAAQGGLVFGGLGAVPMAVLIGSGAVTVVPLLMFAAAAK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R L +G+++Y +P + + + + T R + V + + VY+ V K
Sbjct: 241 RIALGDLGMIQYISPSIQFFLGLTLFGEAFSTQRFAGYLWVWLGVAVYVYGVVRTGKKRN 300
Query: 313 TK 314
Sbjct: 301 KA 302
>gi|146339489|ref|YP_001204537.1| putative transmembrane protein [Bradyrhizobium sp. ORS278]
gi|146192295|emb|CAL76300.1| conserved hypothetical protein; putative transmembrane protein
[Bradyrhizobium sp. ORS278]
Length = 317
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 93/288 (32%), Gaps = 8/288 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + + G + + ++L + +E+ R + + A++
Sbjct: 25 RGIALILLSTVFLGTSDVTAKYLSKTLPSIEITWIRFVVFALIMVPAMI------PGSPL 78
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ V + + L FI L S + FV P+ L +FL E++
Sbjct: 79 FAMRTERVPLHLLRGIALLGSSIMFISGLRYLPIAEASATGFVAPLFVTALSIIFLHEKV 138
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ IA + + +LI+ A+ SA+ +A I G + ++
Sbjct: 139 GLRRWIATAVGLFGVLIILRPGTGAFHLAALFPIASAFAWACTLIMTRMMSGREHAITIM 198
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
++ V + + D F + G+ ++ I + A S +
Sbjct: 199 TYSSIAGVCLLSAMVPFVWTTPSWQDIGFGVLVGVASTMGQWIVVLAFRYADASVLAPFS 258
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
YT L + + + + D + +V + +Y
Sbjct: 259 YTQLLWVSILGFLVFGELPDVWTIVGAAFIVSS-GLYTAHRERVRRSQ 305
>gi|325970992|ref|YP_004247183.1| hypothetical protein SpiBuddy_1164 [Spirochaeta sp. Buddy]
gi|324026230|gb|ADY12989.1| protein of unknown function DUF6 transmembrane [Spirochaeta sp.
Buddy]
Length = 311
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 89/300 (29%), Gaps = 11/300 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G V + +GI P++ + + V ++ R L + F
Sbjct: 13 QKIEGYALVALSACCFGIMPIFARIAYASGVDTTTLLLGRFLIGGFLLSFIA------WR 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + AL L + + P + LG F+
Sbjct: 67 NHALLPPRQSWPVLFLLGVVGYTGTSFCYFNALNHASASLVALLLYAYPALVTLLGFFFI 126
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L+ +IA L +++ SG +A ++ I G
Sbjct: 127 HEKLSKTSLIALLCATSGCVLVIGLSGEGDSVGLALALTAAVVYSVYIIISSQVVGKRTA 186
Query: 200 MCVLAIPALFY---VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
M A L G L F F G+ R
Sbjct: 187 MASSAFIILSASLSYCVIALFKGVSLPKTGSGAMAILAIAFFSTVVAFWSFFAGLGRIGA 246
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ ++ PL+ ++ ++ L + + + ++V ++V+ LP + + KS
Sbjct: 247 AKASLVSTLEPLVTVLCAILFLGESLTISTLLGGLLIVGSLVLSALPCPGQAKQEYQGKS 306
>gi|295399966|ref|ZP_06809946.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
gi|294977745|gb|EFG53343.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
Length = 310
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 97/297 (32%), Gaps = 10/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ G+ F+ A +WG + +++ L+ + ++ R + +F + F +
Sbjct: 2 KNTLFGSFFLSLAASIWGGMYVVSKYVLDFIPPFTLVWLRYAIAFIVLFGVLK-FHEHKT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +++ + + V + TP V L
Sbjct: 61 KMRLSIRKQDWLLLGWIGFIGYFVSISLQFTGTKLSDAHTGALITSATPAFIVLFARFVL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + +A LL + ++I+ SG +L A + +
Sbjct: 121 NEPITLKKAVALLLASIGVVIVIGLDDRGGQSFSGNMMLVGAALTWALLSVYVKVASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S+ + A+ V+ I L + + F +++ G+
Sbjct: 181 SALVITTYAILFALLFTTPVMLWELHEPFVSLPNMIVVFGVLYLGIISTAGAFFLWNKGM 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + PL+ V L++ I + +++I + + ++P +
Sbjct: 241 EMMDAGIGSLFFFFQPLVGAVFGFLFLQEQITASFYLGGLLIIIGVFIAVMPPIHQR 297
>gi|291279320|ref|YP_003496155.1| chloramphenicol-sensitive protein RarD [Deferribacter desulfuricans
SSM1]
gi|290754022|dbj|BAI80399.1| chloramphenicol-sensitive protein RarD [Deferribacter desulfuricans
SSM1]
Length = 282
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 149/289 (51%), Gaps = 8/289 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + L A+++WG P Y + L++++ LEV+++R++ + + + + +
Sbjct: 1 MNLLRPFLAAVAAFLIWGFLPFYWKALKEINALEVLAYRIVMTFILLVVYQFFTNRNTLI 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + S+ LA +W +++ ++ S Y++TP++SVFLG + K
Sbjct: 61 KLFNTITLKKHVI---SSIFLASNWLIYVWGVVNNHIIECSLGYYLTPLVSVFLGGLIFK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+ +++Q I+ +L LS++ + + IP +++ +A ++S Y RK + S +G +E
Sbjct: 118 EQFSNIQKISIILATLSVVNIIVSLKIIPFIAIGLAFSFSMYSVFRKKSNLSSIDGLTVE 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L+IP Y+ F+ G + + + L+ G++ + ++ Y I+ LSTV
Sbjct: 178 SFLLSIPFATYI----FTYGSNLITISPTISFLLLFSGVVTATPLLLYVYSIRELPLSTV 233
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+++Y P LM + +F K+ + + F I+ +A++++ ++ N
Sbjct: 234 GMLQYIGPTLMFLIGLFYYKESFSLMYFLSFLIIWLAVILFTYESIKNR 282
>gi|293194184|ref|ZP_06609947.1| protein RarD [Actinomyces odontolyticus F0309]
gi|292819769|gb|EFF78781.1| protein RarD [Actinomyces odontolyticus F0309]
Length = 316
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 60/308 (19%), Positives = 127/308 (41%), Gaps = 13/308 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ Y++WG PLY L +EVI HR +W L + +G
Sbjct: 2 STQKNEPRALALGVSCYVIWGFFPLYFSLLSPAGAVEVIVHRAVWGL-FFCVVALAVTGS 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++ + + A+ L + ++ ++W ++YA+L + YF+ P++++ LG +
Sbjct: 61 LGKIRALIADRGALWRLAVAGGLVVINWSVYVYAVLAGHTTDAAVGYFINPLVTIALGLI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFAR 185
L ER+ +Q +A L +++++I+ + L SL +
Sbjct: 121 VLHERVTPIQKVALALGVVAVVILVIGQRAVPIVSLTLALSFGLYSLVKKDVAARVDPLA 180
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
++ + + A ++ + + + + L+G G L
Sbjct: 181 GMAIETAAVSPLLLGYYAYLAATSSTSFHTIASSDDSGVSWVIHLALLLGAGALTMIPLI 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+F+ + L T+G ++Y P L ++ +VFI + + T R I G+V +A+ +
Sbjct: 241 MFASAARGLTLGTMGFLQYLGPTLQLLVAVFIFHETVPTFRWIAMGVVWVALACLSADWL 300
Query: 306 INSGKNKT 313
++S + K
Sbjct: 301 LSSVRAKR 308
>gi|326565783|gb|EGE15945.1| RarD protein [Moraxella catarrhalis BC1]
Length = 295
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/290 (21%), Positives = 137/290 (47%), Gaps = 3/290 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G L V A+++WG PLY + L + +E+I HRV+W+ + +
Sbjct: 6 TTTPKGLLTVLSAFLIWGCFPLYFKELIEYDAIEIIVHRVVWTFVILLEITIITRR-FRW 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K PK + + ++ ++A +W +++A+ Q S YF+ P++ V + K
Sbjct: 65 IDQIKKQPKWLFLTFLASVLIATNWLVYVWAVTHDQVLEASLGYFIHPLVGVLFSMLIFK 124
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L +Q +A LL ++ I + G+P +S+ + ++W Y ++ P + +G F+E
Sbjct: 125 EKLRLMQKLAVLLAAAAVGIQIVWMGGLPWVSMLLPLSWGLYGVIQRQTPFDALDGLFLE 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L +L ++ ++ + F + L+ G + +++ K + +T+
Sbjct: 185 TALLVPISLIWLQFSHVASSSMAFWVSSEIW-LLMLAGPVTLVPLLLYNISTKLVQFNTL 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ Y P L+ + ++F +P D R +VF ++ + ++++ +
Sbjct: 244 SFLNYLTPSLIFLLAIFYYHEPFDAKRLLVFVLIWVGLLMFSADMFKHKK 293
>gi|120403759|ref|YP_953588.1| transporter DMT superfamily protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956577|gb|ABM13582.1| RarD protein, DMT superfamily transporter [Mycobacterium
vanbaalenii PYR-1]
Length = 296
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 63/281 (22%), Positives = 133/281 (47%), Gaps = 4/281 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L+ AY++WG+ P + L+ +E+++HRV+WS + + L
Sbjct: 2 RSGLLYGAGAYVMWGLFPAFFPLLKPAGAVEILAHRVIWSFAMMVVVVAAVR---RLGDI 58
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +LV +A +++ +W F+YA+ + YF+ P++S+ LG + +E+L
Sbjct: 59 KAIDRRTWLLLVAAAALISANWLIFVYAVNNGHVVDAALGYFINPLVSIALGMLVFREKL 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
N Q A + + ++ I+T+ G P + +A+++ Y +K + IE +
Sbjct: 119 NRWQFTALAIAVAAVAILTVQLGQPPVVGLGLALSFGLYGAVKKVVRTDPRVSVGIEAAI 178
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A+ Y+V SGG LI G+L + +F+ +R + ++G++
Sbjct: 179 ATPFAIGYLVALQASGGGTLTGHGASHIALLILSGVLTALPLLLFAAAAQRLAMVSLGLL 238
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
Y P + + V + +P+ +R + F ++ +A++V+
Sbjct: 239 FYVNPAMQLSWGVLVGGEPMPPMRWLGFALIWLALLVFTGD 279
>gi|164688457|ref|ZP_02212485.1| hypothetical protein CLOBAR_02102 [Clostridium bartlettii DSM
16795]
gi|164602870|gb|EDQ96335.1| hypothetical protein CLOBAR_02102 [Clostridium bartlettii DSM
16795]
Length = 303
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 88/279 (31%), Gaps = 6/279 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + + + + + + + + R L + + I+ G L
Sbjct: 6 KSNRIKGILCIITSACGFAVMSAFIKLSGDLPSFQKTFFRNLVAAAIALYLIIKHKGSLV 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ K + + YA+ + ++P + V ++FL
Sbjct: 66 GKKENRKILVLR------SIFGTIGIVCNYYAVDRLVLSDANMLNKLSPFLVVIFCALFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE++N QI + + L + S + + A A V
Sbjct: 120 KEKINLKQITMVSVAFIGALFIIKPSFNVEVIPYLVGVLGAVGAALAYTCVRVLGKKEDY 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ + F ++ + ++L+ G+ S + K A +
Sbjct: 180 YTIVFFFSTFSLIAILPGFIAVYKPMTTIQVVYLLLAGISASIGQFGITLAYKFAPAKEI 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I +Y+ + + + + DT+ I + IV A
Sbjct: 240 SIYDYSGIICSAILGIVFFGEHPDTMSIIGYLIVFAAAF 278
>gi|83643232|ref|YP_431667.1| permease [Hahella chejuensis KCTC 2396]
gi|83631275|gb|ABC27242.1| predicted Permease [Hahella chejuensis KCTC 2396]
Length = 303
Score = 84.6 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 117/278 (42%), Gaps = 1/278 (0%)
Query: 37 WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
WG P+Y + L + LE++ HR++WS + + SG L ++ L + + L
Sbjct: 24 WGFMPIYFKQLSHMPALEILGHRIVWSSV-LTVLLCAVSGRLMAVRAGLLEWRKLRWLAL 82
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
SA ++ +W FI+A+ S Y++ P++++ LG +FL ERL LQ IAA L +
Sbjct: 83 SALLVGGNWLLFIWAVNNNHMTEASLGYYINPLVNMLLGYLFLGERLTFLQRIAAALAVG 142
Query: 157 SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF 216
+L+ + G + + + + L PA +W
Sbjct: 143 GVLLEIIAFGSLPWIAIVLALSFGFYGLLRKQVAVDAVSGLCVETCLLAPAALIYMWASA 202
Query: 217 SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVF 276
S + + L L+ G + +F +R L+ +G +Y P +M + ++
Sbjct: 203 SSASNMLTNDTYHNLLLLAAGPATTLPLLLFIIASRRLTLTILGFFQYLGPSIMFILAIT 262
Query: 277 ILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++P+ + F I+ A+ + V+ +
Sbjct: 263 LYQEPVPQGKWTTFVIIWCALALVSWDAVMRYRSRRLA 300
>gi|89055869|ref|YP_511320.1| hypothetical protein Jann_3378 [Jannaschia sp. CCS1]
gi|88865418|gb|ABD56295.1| protein of unknown function DUF6 transmembrane [Jannaschia sp.
CCS1]
Length = 314
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 92/300 (30%), Gaps = 8/300 (2%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+N G ++ + + + + V ++ R L + +
Sbjct: 17 DNPVSRPGWGIFWMLLTGLCFVTVTATVKMVGTDVPAIQSGFLRYALGLVFLIPMV---- 72
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+++ + + T A+ + +A+ + ++ PV + L
Sbjct: 73 ---PSVRNAPLDRGLARLFFARGTAHALAVCLWFFAMTRIPIADVTALNYLNPVYVILLA 129
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+FL ERL +I A + + I+ + + + ++A A + G
Sbjct: 130 VLFLGERLGPYRIAAVAVAFMGTFIIIRPGFREIDVGHVTMLFAAVAMAASYFLAKLASG 189
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
V+ ++ + + D +L + + + A
Sbjct: 190 RVAAEVVVFYLSILVPILLAPLAWYVWEPVGWADIGWLFLCAFFATTGHYTMTLAFRAAP 249
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
L+ + + + VF+ +P D G+++ A+ + + + + K
Sbjct: 250 LAVTQPVTFLQLIWATALGVFVFGEPADVFVIAGGGMIIAAVSFITWRETVLARRARVLK 309
>gi|16124509|ref|NP_419073.1| rarD protein [Caulobacter crescentus CB15]
gi|221233193|ref|YP_002515629.1| RarD family membrane permease [Caulobacter crescentus NA1000]
gi|13421387|gb|AAK22241.1| rarD protein [Caulobacter crescentus CB15]
gi|220962365|gb|ACL93721.1| RarD family membrane permease [Caulobacter crescentus NA1000]
Length = 300
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 6/296 (2%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF 74
++ + Y+LWG PLY L V+ E+I+HR LWS+ ++
Sbjct: 3 PHSQTESRSAYAAGVGCYLLWGFLPLYFHLLAKLGVTSWEMIAHRSLWSVLWALGLVLIA 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ L+ PK +G+L + + +W +++A+ S Y++ P++++
Sbjct: 63 RQV-GQVAQVLRQPKTLGVLALTTLAIFSNWTIYVFAVNAGHVIEASLGYYINPLMNMAA 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSS 193
G++ +ER++ +A L + + I T+ G P++SL +A+T+ Y RK + +
Sbjct: 122 GALLFRERMSTEGKVAIGLAAVGVAIQTVALGHLPIVSLGLALTFCVYAILRKQVKADAQ 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G FIE LA+P L YV + S G+ F T L G +F++ +R
Sbjct: 182 TGLFIECAYLALPGLAYVWF-LQSSGQGHFGDGASVTTLLALAGPATVVPLALFAWSARR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
LS VG +++ AP + + V +P +R + F + + + + +
Sbjct: 241 LPLSAVGFLQFIAPTIQFLLGVA-FGEPFTPLRALSFVFIWLGVATFAYGAWRKAK 295
>gi|146276219|ref|YP_001166378.1| hypothetical protein Rsph17025_0163 [Rhodobacter sphaeroides ATCC
17025]
gi|145554460|gb|ABP69073.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17025]
Length = 317
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/291 (10%), Positives = 85/291 (29%), Gaps = 7/291 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G A+ ++ + + L S ++++ L P ++
Sbjct: 1 MAKSNTRGAFLALLAFAIYATHDVVVKLLGRDYSAVQILFFATLLGFPLATIILM----- 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
P+ ++ + YA T F P++ L
Sbjct: 56 -RDRVSGNLRPRHPWWVLLRTGCIVTTALCAFYAFSVLPLAQTYAILFTMPLLVTLLAIP 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E + + A + +LI+ PL A +A + ++ V
Sbjct: 115 LLGETIGLHRGCAIAAGLCGVLIVLRPGAEPLSLGHGAALLAAATSSLGSVIVRKIGQDE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ +L P + G + + + + + + + + A+
Sbjct: 175 RSVVLLLYPMVANFFVLGLALPFVYRPMPLEHLGMMGIIAVFSLVAMLLTIAAYRMAEAV 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V M+Y+ + + + + D + G+++ + + + +
Sbjct: 235 IVAPMQYSQMIWAAIFGWLVFGERADVWTWLGAGVIIASGLYIVGREARRN 285
>gi|73662609|ref|YP_301390.1| permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
gi|72495124|dbj|BAE18445.1| putative permease [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 301
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 78/283 (27%), Positives = 143/283 (50%), Gaps = 6/283 (2%)
Query: 34 YILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLLKDTLKNPKA 90
YILWGI P+Y + + + E+++ R++ S+ + F ++ +K NP
Sbjct: 16 YILWGILPIYWELISDIGAFEILAFRIVLSMVFMLFILIITKNMAPFKRDIKQLFTNPIQ 75
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ ++ + ++ ++WG FI+A+ +S Y++ P++S+ L +FLKER N L+ IA
Sbjct: 76 LIAIIAAGYVITINWGTFIWAVTNGHVLQSSLGYYINPLVSILLALIFLKERFNKLEWIA 135
Query: 151 ALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
L ++ +L MTL G P +SL +A ++ Y +K +P+ + IE V A
Sbjct: 136 IGLAVIGVLYMTLKMGVFPGISLLLAGSFGVYGLIKKIVPIDAISSITIECIVTAPAGFI 195
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
Y+ + +GG F + + L G + + +FS G +R LS G ++Y P L
Sbjct: 196 YLWYIWQNGGLSFGMNSSSFWLIFSGA--VTAVPLILFSAGARRIPLSLTGFIQYIGPTL 253
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
M + +F+ K+P D + I F + I +++Y + K+K
Sbjct: 254 MFILGIFLFKEPFDIDQLITFVFIWIGIIIYSISQYFKIKKDK 296
>gi|116749432|ref|YP_846119.1| hypothetical protein Sfum_2001 [Syntrophobacter fumaroxidans MPOB]
gi|116698496|gb|ABK17684.1| protein of unknown function DUF6, transmembrane [Syntrophobacter
fumaroxidans MPOB]
Length = 315
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 101/300 (33%), Gaps = 14/300 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A++ G L+V A +LW ++ + +FL V+ +E++ RV + +F +
Sbjct: 3 QGAAVIPRRGYLYVIAAALLWAVSGVSGKFLFQRGVTPMELVQLRVTLASGLLFAWFLLS 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + A +A + YA+ + ++ P
Sbjct: 63 HRERLRI----ARRDILYFFILGAVGMATLQFTYFYAISKINVAVAILLEYLAPAFIAIY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARK 186
VF ERL + A + + LL++ I+ A+
Sbjct: 119 SVVFAGERLTRPTLAALGGSLAGCYLAVGAYNFDLLAMNWKGIVVGIISAISYAWYAVHG 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + L + + + + ++ L + F +
Sbjct: 179 EHGMRRYDPWTVLFYALLFAGVCWNIVLPPLSAFRYTYSSVEWAWILYIGVFGTAIPFGL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+S GI + + + P+ S F L + + ++ +V++++++ +
Sbjct: 239 YSKGISLIRATRASVTATLEPIAAGFVSFFFLDERLQPLQIAGGVLVIVSILLLQMRKEY 298
>gi|163794078|ref|ZP_02188051.1| hypothetical protein BAL199_01654 [alpha proteobacterium BAL199]
gi|159180692|gb|EDP65211.1| hypothetical protein BAL199_01654 [alpha proteobacterium BAL199]
Length = 322
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/318 (15%), Positives = 109/318 (34%), Gaps = 25/318 (7%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIV 72
+ K PT++GTL A + I + +FL L +V+ R + L + ++
Sbjct: 1 MIKSLTDNPTLLGTLSALVAVFCFSINDMAIKFLSGDYALHQVVLIRAIIGLIVLLAVLL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
SGG + L+ + + + + F + T +FV P++
Sbjct: 61 PLSGGFAALRTRRLS-----LHLARGACVVFANMSFFLGIATLPLAEGVAIFFVAPMVIA 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
VFLKER+ + A +L ++I+ ++ +A+ +A +
Sbjct: 116 VFSVVFLKERVGPRRWAAIATGLLGVVIVLRPGTEVFQFASLYPVAAAFGYASLHMLTRY 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGF-------------------SGGEHFFLGNIPDTLFL 233
+ + L +++ + ++ + + D L
Sbjct: 176 IGRTESALAMSFYIQLTFIMVSAGMGLLFGDGRFADTGDASLDFLFRNWVVPDSGDWGVL 235
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ G+ ++F S + A+ + V EY A L ++ + + + D V ++
Sbjct: 236 VAIGVASAFGGFGISQAYRIAEAAVVAPFEYVAIPLSVLWGILVFNEWPDGVALAGIALI 295
Query: 294 VIAMVVYLLPTVINSGKN 311
+ + +
Sbjct: 296 TGSGLYMIWRESRLRSAR 313
>gi|71082892|ref|YP_265611.1| DMT family permease [Candidatus Pelagibacter ubique HTCC1062]
gi|71062005|gb|AAZ21008.1| drug/metabolite transporter (dmt superfamily) [Candidatus
Pelagibacter ubique HTCC1062]
Length = 294
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 97/290 (33%), Gaps = 6/290 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L++F + + + L ++ EV+ R + L +F I G L
Sbjct: 3 TKNQLGFLYMFLSVCTFSVMDLLVKWSSDYPTGEVLFFRGFFGLLPTYFLIP--KGKLKT 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
T ++ + + + L + AL + + P+ L L
Sbjct: 61 FYTTERSKEHLFRCLMGLMALIA----IVVALRELPLAVVVSLSYAAPLFITVLSIFLLS 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ + +A L+ + ++I+ + L A TI +
Sbjct: 117 EKVGIFRWLAVLIGFIGVIIIAEPGFKGMNYLYFLPLIFCIGMAFVTITIRKLSTTEPIW 176
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + + + + N D + L G+ + K +++S V
Sbjct: 177 LISIFFTITISIAGLATIPMGWKMPNFQDFILLALIGVTGGSANLFLTQSYKLSEVSLVA 236
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++Y A + I FI + I +VV+A ++ + + K
Sbjct: 237 PLKYLALVFAIFFGYFIWNEIPTIKTLIGASLVVLASLIIFRREIYHKQK 286
>gi|89093048|ref|ZP_01165999.1| hypothetical membrane protein [Oceanospirillum sp. MED92]
gi|89082698|gb|EAR61919.1| hypothetical membrane protein [Oceanospirillum sp. MED92]
Length = 303
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 71/297 (23%), Positives = 138/297 (46%), Gaps = 3/297 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L +G L A+++WG+ PL+ Q L+ V +E+ + RVLWS+P + + +
Sbjct: 3 KLQRHIGLLLTTSAFVVWGLLPLFYQHLKGVEAVEIFAFRVLWSIPMMALLLYITVTPVR 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + ++ L+ S ++ W + + Q + S ++F+TP++S+ +G FL
Sbjct: 63 VFKLL-LDLRSCVWLILSTACISTSWYLNTWGVTHGQVLMVSLAFFLTPLVSILVGVFFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KERLN QI+A + + + + P L++ IA+ + Y +K + + +
Sbjct: 122 KERLNGFQILALIFCLSGFVYACFNLESFPWLTIGIALAFGGYGLIKKQVQIDTLNALSA 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E+ ++ AL Y+V+ L L L + +S+
Sbjct: 182 EVLIMVPFALIYLVFAADHMSFKPEDLRTQQLLMLTAPLTLLPLGLFSLGVKRMK-NISS 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V I++Y P L + +VF+ + ID+ R + F +V I +++ + + SG +K K
Sbjct: 241 VAILQYLEPTLYFLLAVFVFMEAIDSNRLVTFVLVWIGFLLFSINGLRASGVHKAIK 297
>gi|70727163|ref|YP_254079.1| hypothetical protein SH2164 [Staphylococcus haemolyticus JCSC1435]
gi|68447889|dbj|BAE05473.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 294
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 100/296 (33%), Gaps = 6/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + + + ++ + + V + R ++ F I
Sbjct: 2 NPKVKGIIAILISAVGFSFMSVFFRLAGDLPVFQKSLARNFVAMFIPLFFIF------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 56 KQPMFGKLSSQPLLISRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLN 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QIIA ++ IL +L + + ++A +S A V +
Sbjct: 116 EKVRKYQIIAMIVAILGMLFIVKPEFSSTMITSLAGLFSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF VV + ++L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVVVLIPFSIATYEPMTTIQMVYLLGAGLSAAVGQIGITLAYSFAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
I Y + + + + + D I + I++ A + K + +
Sbjct: 236 IFTYASIIFTAIFGFILFGETPDFYALIGYVIIIGASYYMFEKARRQTAITKQQSN 291
>gi|295107256|emb|CBL04799.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Gordonibacter pamelaeae 7-10-1-b]
Length = 341
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/281 (11%), Positives = 80/281 (28%), Gaps = 16/281 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
F+ A +WG+ + + ++ ++ R + + ++
Sbjct: 18 AFLLVAAAIWGLGTVVIKSTVDAFPPAWIVGVRFTAAGIILGVVML-------PRIRKHL 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + ++ + + L +SF + VI FLG R
Sbjct: 71 DAEHLCKGSVLGVMVFLAYWSNSTGLTDTTASNSSFLTSLYCVIIPFLGWALRGPRPTRF 130
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ AA++ + + ++ G + L+ + K P +
Sbjct: 131 NLAAAMVCVAGVECVSFAGADGFSLRFGDLVTLLSALFLSFHVVYTAKFAPGSDMTLLTV 190
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++A LG T + + + + +
Sbjct: 191 IQFLVAGLLGLAAGLALEPMPNFAALGADTWTSLAYLAVFASCVALLLQNLAVAHVDPAP 250
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ T + ++ SV L + + F ++ +VV
Sbjct: 251 ASLFLATESVFGVLFSVLFLGELLTAPLFAGFALIFAGIVV 291
>gi|160877007|ref|YP_001556323.1| hypothetical protein Sbal195_3903 [Shewanella baltica OS195]
gi|160862529|gb|ABX51063.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS195]
gi|315269210|gb|ADT96063.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS678]
Length = 293
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 117/299 (39%), Gaps = 9/299 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G + + A +L+G T L+++ + +S L++ R + + + + L
Sbjct: 1 MSSAKPSGLIELHLAVLLFGGTALFSKLI-PLSALDITFLRCIVAAIVLGLLV-----KL 54
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + TL + + + + I+++HW + A+ + ++F PV++V +
Sbjct: 55 SHRRLTLASKQDYLVAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
R+ L II+ L+++ ++++ L +AI + + AR +
Sbjct: 115 TGSRIKLLDIISGALVLIGVILLIPEANLGNDTTLGIAIGIVSAILFTARNLLHKRYFSQ 174
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V + E + L ++ + + +F+ +++
Sbjct: 175 YSGPHAMFYQTLVAVVFLMPWHQTELNSISLEVWGLIILLGVVFTAAPHALFTSALRQLS 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
TVG++ P + ++ IL + ++ I I+V + + + + K
Sbjct: 235 AKTVGLVSCLQPFYGAMLALIILGEELNLNTIIGGTIIVATAIFETHQSHQSQRRKKNA 293
>gi|94984421|ref|YP_603785.1| hypothetical protein Dgeo_0313 [Deinococcus geothermalis DSM 11300]
gi|94554702|gb|ABF44616.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Deinococcus geothermalis DSM 11300]
Length = 317
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 86/283 (30%), Gaps = 5/283 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + +WG T + L Q+ +I+ R L + ++ ++ +
Sbjct: 13 SSHTRGLLLLVLVTAIWGSTFAVVKELGTQLPPPVLIAWRFLIAGVVLWP-MLALTRSKE 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ + L +G AL T +F ++ V+ +
Sbjct: 72 KSRPAPRSRPLWRDGLILGAWLIAGYGTQTVALQTTGANRAAFFTALSVVLVPVWLTFAQ 131
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG---IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L + +A L + L +++ G + + A E
Sbjct: 132 RRPLPMVLWLALPLAVTGLALLSWEGGALVVGDVWALACAVTYAGFIIALERAASRHEVL 191
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
LA L VW + + L + + + G +
Sbjct: 192 RFTFAQLAAVTLLAWVWAVLAAPAQLWPPAAAWGPLLYLGIAATALTTLLQTVGQRAVSA 251
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ P+ + S ++ + I + +VV A ++
Sbjct: 252 AEASLIYALEPVTAGLFSFLLIGERIGARGALGGLLVVAATIL 294
>gi|289450298|ref|YP_003474737.1| hypothetical protein HMPREF0868_0399 [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184845|gb|ADC91270.1| putative membrane protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 298
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 89/297 (29%), Gaps = 7/297 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ +A+ G + + + + + + V ++ R L + FF ++
Sbjct: 1 MENFSANRSYTKGITAIVISALGFAGMAFFVKLSGDVPTMQKAVFRNLVTALFAFFMLI- 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ P+ +V + + A+ + ++P ++
Sbjct: 60 -----KAKEKFYIEPRNRWPMVGRCVCGTIGFVSNFIAIEKLPLGDANILQKLSPFFAII 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ L+E+ N L + + +L ++ + + G+ L I V + T
Sbjct: 115 MSIFILREKPNRLAVGSVILALIGAVFVVKPTGGLVSLPALIGVLGGLGAGSAYTFVRRL 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G ++ + V+ + FL GL + +
Sbjct: 175 GLGGVKGPLIIFSFSASSVIAILPVAIWQYRPMTPRQIGFLFLAGLCSVVGQVFVTKAYT 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + + +YT L + L + D I + I++ V L
Sbjct: 235 FAPAKAISVFDYTQVLFAALLGFTFLGEIPDRYSIIGYVIIIATAVGKWLLERRRDR 291
>gi|304410905|ref|ZP_07392522.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS183]
gi|307304924|ref|ZP_07584674.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
BA175]
gi|304350802|gb|EFM15203.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS183]
gi|306912326|gb|EFN42750.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
BA175]
Length = 293
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 116/299 (38%), Gaps = 9/299 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G + + A +L+G T L+++ + +S L++ R + + + + L
Sbjct: 1 MSSAKPSGLIELHLAVLLFGGTALFSKLI-PLSALDITFLRCIVAATVLGLLVKLSRRRL 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L + + + + I+++HW + A+ + ++F PV++V +
Sbjct: 60 TL-----ASKQDYLVAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ L +I+ +L+++ ++++ L +AI + + AR +
Sbjct: 115 TGSKIKLLDMISGVLVLIGVILLIPEANLGNDTTLGIAIGIVSAILFTARNLLHKRYFSQ 174
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V + E + L ++ + + +F+ +++
Sbjct: 175 YSGPHAMFYQTLVAVVFLMPWHQTELNSISLEVWGLIILLGVVFTAAPHALFTSALRQLS 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
TVG++ P + ++ IL + ++ I I+V + + + + K
Sbjct: 235 AKTVGLVSCLQPFYGAMLALIILGEELNLNTVIGGTIIVATAIFETHQSHQSQRRKKNA 293
>gi|307546894|ref|YP_003899373.1| hypothetical protein HELO_4304 [Halomonas elongata DSM 2581]
gi|307218918|emb|CBV44188.1| hypothetical protein HELO_4304 [Halomonas elongata DSM 2581]
Length = 291
Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 102/293 (34%), Gaps = 7/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + + + T++L + S L++I R L SLP + + G
Sbjct: 2 SSSFKGILCMCGGVLCLALGDAITKWLGETHSPLQIIFFRTLVSLPLIALIARFNGGLRK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L G+ + I F++ L T+ F P+ L L
Sbjct: 62 LATR------RPGIHLLRGLIFTGTMICFMWGLTLLPLAETTAIAFAAPLFVNLLSVPLL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER++ ++A +L + +L++ G A+ V +A +A I G
Sbjct: 116 GERVDRTTLLATMLGFIGVLVVVRPGGSSFQPAALIVVGAAVFYALMMITARRYGGREHL 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ L ++ + + + + F + G+L + + A +
Sbjct: 176 WAMVFYTTLVPMLVSALTLPWVWQMPAPIHWPFFLLAGVLGVGAMVGLTLAFRYAPAALA 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+YTA L ++ ++ + D + +++++ + + +
Sbjct: 236 APFDYTALLWAVLLGWWLWDEVPDLWVFVGGTLIIVSGLAIAYHERRVALNRR 288
>gi|257063259|ref|YP_003142931.1| predicted permease, DMT superfamily [Slackia heliotrinireducens DSM
20476]
gi|256790912|gb|ACV21582.1| predicted permease, DMT superfamily [Slackia heliotrinireducens DSM
20476]
Length = 291
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 94/283 (33%), Gaps = 9/283 (3%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
CA +L+G + + + E++ R L + + G + + +
Sbjct: 13 LCALLLFGSNGVVASRIA-MGSHEIVFLRTLIGSVFLIAVFLLGKGTFHIREY----KRD 67
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+V S + + W F A ++ Y+ PVI + L V +ERL +++
Sbjct: 68 ALFIVLSGAAMGLSWLFVFEAYRLIGVGFSTLLYYCGPVIVMILSPVIFRERLTKPKVVG 127
Query: 151 ALLIILSLLI----MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+++++ L++ + + L + G + L
Sbjct: 128 FVIVLVGLVLVNGKLVGTGNVWGLFCGAMSAVMLFLLITFNKQSTHIVGMENSVIQLTAS 187
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
L V+ G + L+ + ++ + + + TV + Y
Sbjct: 188 FLTVAVFVWAKQGFALDVPAGSWLWVLMLGLVNTGLGCYLYFSALSKLPVQTVAVCGYLE 247
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
PL +V S +L + + ++ + ++ ++ L
Sbjct: 248 PLSAVVFSAVLLGERMTPLQVVGAVCIIGGAMIGELVKERAKR 290
>gi|190575982|ref|YP_001973827.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
gi|190013904|emb|CAQ47544.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
Length = 316
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 80/300 (26%), Gaps = 13/300 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
PT++ LF A +LWG + T+ V +++ R L + + +
Sbjct: 13 PPRTPTLLNYLFPILACLLWGANTIVTKLASGAVGPIDIGFFRWLVAAIVLLPFALPRLR 72
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + YA + P++++ L
Sbjct: 73 NNLQTVRANLGRFLLLGCLGGVMYQCLA----YYAAHFTSATNMGVIQALIPLLALALSR 128
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTI 188
VF+ + I ++ + ++ + G+ + + A+ +
Sbjct: 129 VFMGHPVRGTSIAGTVISTVGVVAVVSQGDLARLAAQGVNRGDAIMLIGALAFAAYNVLM 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+E L A ++ + +
Sbjct: 189 QRWKIPLTVLESLFLQATAASLILLPAQLLVGTGVNNLTAVGCIGFAAVCASILAPLTWM 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ R + V P++ +V +L + + + V +V +
Sbjct: 249 TGLSRLGAARVSGFFNLVPIVTAALAVLLLGESLSGWVLAGGVLAVSGVVFAEYAAKRAT 308
>gi|257462595|ref|ZP_05627005.1| transporter [Fusobacterium sp. D12]
gi|317060246|ref|ZP_07924731.1| conserved hypothetical protein [Fusobacterium sp. D12]
gi|313685922|gb|EFS22757.1| conserved hypothetical protein [Fusobacterium sp. D12]
Length = 297
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/298 (10%), Positives = 92/298 (30%), Gaps = 13/298 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ MG L F + WG + + ++L V+ ++ R+L + + +
Sbjct: 1 MRAGMGILVTFIGGVFWGFSGVAGKYLFESAGVTSDWLVPWRLLTAGSVMLLYLY---HK 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +L+++ + + + + + + P +
Sbjct: 58 QRKAVFRILKEDCKDLLIYAVFGMMACQYTYFTTVQYSNAAIATILQYSAPPFIMVYMCY 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPV 190
+++ +++I+ + + + ++ H + ++ + + +
Sbjct: 118 RERKKPERIEVISLVSSCIGVFVLCTHFQFETFVISPKALLWGLISAFAMMINTIQPVNL 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G F+ + I + F L F ++ G
Sbjct: 178 LKKYGSFLPLAWSMIIGGSLLFLWTRPDRIPVHYTWNLFGGFFAVVFLGTIVAFTLYMEG 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
IK + ++ P+ V S+ +L + + ++++A+ + PT
Sbjct: 238 IKMIGPTKAALIACVEPISATVLSILLLGTSFEFFDIVGIALILLAVCLLSYPTKNKK 295
>gi|108759029|ref|YP_628482.1| hypothetical protein MXAN_0200 [Myxococcus xanthus DK 1622]
gi|108462909|gb|ABF88094.1| putative membrane protein [Myxococcus xanthus DK 1622]
Length = 318
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 91/290 (31%), Gaps = 12/290 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
++ G L V + + +G L+ + + V ++ R + + +V
Sbjct: 11 RPPAMSRTAGFLIVALSGVCFGALGLFGRLAYAAGTDVATLLFLRFSIAGAVLASVMVLR 70
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ V +++ A G + +AL L + + P + +
Sbjct: 71 RQRWP------RGGVLVVLMLLGAAGYFSQSGVYFFALQHAPAGLVALLLYSFPALVALV 124
Query: 135 GSVFLKERLNHLQIIAALLIILS----LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V KE L ++ +A +L + + + +P + L + + + V
Sbjct: 125 QRVVFKEHLGRVKWLAVVLSVGGTVLTADLSQGGATLPGVLLGLLSALFYTVYVVASGRV 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G V+ A F G F + + +F G
Sbjct: 185 SGRAGPLASSTVILCSAGFSFGVAMLVRGPAFPGSVTGWAAVVGLALVATVAAVLLFFVG 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
I+R ++ PL +V L + + + + +++ A V+
Sbjct: 245 IQRIGPVNTSLVSNLEPLTAVVLGALFLDERLTPRQVLGGVLILGAAVML 294
>gi|154493707|ref|ZP_02033027.1| hypothetical protein PARMER_03048 [Parabacteroides merdae ATCC
43184]
gi|154086917|gb|EDN85962.1| hypothetical protein PARMER_03048 [Parabacteroides merdae ATCC
43184]
Length = 314
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 99/304 (32%), Gaps = 15/304 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G A +G PL+ L + + V+ R L+++P + I
Sbjct: 2 NTKVKGYFLGAIAAATYGTNPLFALPLYKDGMDPDSVLFFRYLFAIPILGMMIKGRGRSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++A + + + S FV P++ + ++
Sbjct: 62 KIEHKAAVPLIVM------GLLVAFSSLALFQSYNYMEVGIASTLLFVYPIMVALIMALV 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVG 191
KE+L + LL + + ++ LL +A A++++ Y +
Sbjct: 116 FKEKLTLQTVFCILLALSGIGLLYKSGDGTTLSLTGVLLVMASALSYAIYIIGVNQSTLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + +L + V GF + + + F + +
Sbjct: 176 NVATLPLTFYILLFGVSLFFVRVGFGKDLYIVDKWYLWGNLIALAVFPTAISFLCTTSAV 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + I+ P+ + V + + + ++++A+ + + + I S
Sbjct: 236 QYIGSTPTAILGALEPVTAVFFGVAVFGETLTPRIGCGILLIILAVTIIIAGSNITSHLI 295
Query: 312 KTKK 315
+ +K
Sbjct: 296 RFRK 299
>gi|218661454|ref|ZP_03517384.1| hypothetical conserved membrane protein [Rhizobium etli IE4771]
Length = 431
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 71/259 (27%), Gaps = 4/259 (1%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
+ V R GGL T + + V +LAV
Sbjct: 5 LASTYPPIFVTMIRYWAFALFTIVLASKMRGGLKATARTKRPL----LQVVRGVLLAVQV 60
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
I + + TP++ L L ER+ + A + + +L++
Sbjct: 61 VLAITCFAVIGLARSQAIFSATPILIALLSMPILGERVGWRRWTAIGVGLFGVLLILKPE 120
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
G + S + FA I M + + G ++
Sbjct: 121 GEFFDVKLLLAILSCFNFAFYVIATRFVSRDDSSMTSFFYTGVVGGITMTLVGPFYWSWM 180
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+ D ++ + + + V + Y + + + V I + +
Sbjct: 181 SPSDWGWMALVCMTSISSHYFLIRAYDLLDAAAVQPLTYLSLVYASIIGVTIYNETLSLN 240
Query: 286 RTIVFGIVVIAMVVYLLPT 304
I IVV A + +
Sbjct: 241 MIIGSIIVVAAGIFTIWRE 259
>gi|225387110|ref|ZP_03756874.1| hypothetical protein CLOSTASPAR_00860 [Clostridium asparagiforme
DSM 15981]
gi|225046796|gb|EEG57042.1| hypothetical protein CLOSTASPAR_00860 [Clostridium asparagiforme
DSM 15981]
Length = 307
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 90/286 (31%), Gaps = 13/286 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G +++ +I+WG + ++ L + L V+ R S+ ++ +
Sbjct: 24 NQKRLGYIYLVITFIIWGSIYVVAKYALAVIPPLTVLLGRYALSVLILYVIL------KK 77
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ ++ + V GF + L S + PV + ++ L
Sbjct: 78 KGMKKIERADRKYFIIIGSVGYFVSIGFQLIGTNLLDASLASLINALNPVFIPLIAALVL 137
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV------GSS 193
KER++ +I + + + + G L IA + + F + +
Sbjct: 138 KERVSLRRIAGIAISVAGVYAILGVGGGELSLAGIAASICSVTFWSVSSVMVRKVAGKYD 197
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + + +++ ++
Sbjct: 198 PIQIAFVGMAIALCFNIPASIWELSTTPCRFTLPAVLSLIYLAVVCTALAHTLWNKSLQL 257
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T ++ PL V V +L + I T I ++ +++
Sbjct: 258 LSAGTCSMLYPLQPLTSAVLGVLLLHEQITTGFVIGAVVISAGILI 303
>gi|163853646|ref|YP_001641689.1| transporter DMT superfamily protein [Methylobacterium extorquens
PA1]
gi|163665251|gb|ABY32618.1| RarD protein, DMT superfamily transporter [Methylobacterium
extorquens PA1]
Length = 294
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/291 (20%), Positives = 124/291 (42%), Gaps = 8/291 (2%)
Query: 25 MGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG ++ AY+ WG+ P++ + L+ + +++ R+ WS V I L+
Sbjct: 1 MGLIYALAAYLSWGLVVPVHFRLLDGIPPGTILAQRIAWSALLVIGLIALLRKRLANPFP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
G+LV SA ++A++W ++ A+ + S YF+ P++SV LG++ L ERL
Sbjct: 61 L---RPRHGLLVVSAGLIAINWMLYLVAVSSGHMLDASLGYFINPLVSVALGALVLGERL 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q++A +++L ++I +G + A FA +
Sbjct: 118 RPVQVVAVAIVVLGVVIAVAMAGRL----PLLSLGLAVTFALYGLVRKLVAVDGTVGFCA 173
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + L G+ + F+ R L+T+G+M+
Sbjct: 174 ETFLLLPAALAYLAFVAPPVPDDARTWALLALTGVTTALPLIWFAAAATRLTLATLGLMQ 233
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y AP ++ S + + + ++FG++ +A+++Y + + + +
Sbjct: 234 YIAPSCLMGLSTLVYGETLTPDHLVLFGLIWLALMLYAYDAIRHERRRRAA 284
>gi|160935469|ref|ZP_02082851.1| hypothetical protein CLOBOL_00365 [Clostridium bolteae ATCC
BAA-613]
gi|158441827|gb|EDP19527.1| hypothetical protein CLOBOL_00365 [Clostridium bolteae ATCC
BAA-613]
Length = 298
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/288 (15%), Positives = 99/288 (34%), Gaps = 2/288 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G V A + +G+ P+ ++ L ++ V+ +R + + F G
Sbjct: 1 MTKQIRKGYGTVILASLAYGVMPVVSKLLLLSGMNSESVVFYRFFLTCLFSALILAAFRG 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++ G+L F T+ + + + ++ FVT ++ G
Sbjct: 61 FRAVTLPQAVLLALFGILGFGFTMQFLTISYQYIPIGLATVLHFAYPLFVTLIMLAVYGE 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
RL A + ++ L G + +L AVT+SA+ + K GS
Sbjct: 121 KPAPARLWGCAAALAGICLMVDLKGGFSPGGVIYALLSAVTYSAFVVSNKKACYGSLSPM 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+LF+ + +G + L F FC G++
Sbjct: 181 LCLFAFSLSASLFFGLSCTLTGTLQVPCSLYQWGCLMAVSLLCTVFAFCTLMTGVRILGA 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ P +V V + K+ + I ++++ ++ +L
Sbjct: 241 AKASVINMLEPATGVVFGVILFKEKLSLKIMIGCACILVSTLITVLAR 288
>gi|146276294|ref|YP_001166453.1| hypothetical protein Rsph17025_0238 [Rhodobacter sphaeroides ATCC
17025]
gi|145554535|gb|ABP69148.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17025]
Length = 324
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/311 (11%), Positives = 103/311 (33%), Gaps = 14/311 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+S + + + G + +++ I + V E + R +++P + ++
Sbjct: 12 VSIRESPMHPLRGIGLKVASVLIFIIMSALIKAASDRVPAGEAVFFRSFFAMPVIIVWLI 71
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + L+ V+ + + G L + + P+++V
Sbjct: 72 WRREWRTGLRAV-----NPMGHVWRGLVGTLAMGLGFAGLAYLPLPEVTALGYAAPLLTV 126
Query: 133 FLGSVFLKERLNHLQIIAALLIILSL--------LIMTLHSGIPLLSLAIAVTWSAYCFA 184
++FL E + +I A +L ++ + +++ G A V A
Sbjct: 127 IFAAMFLGEEVRAFRISAVILGLVGVLIVLSPRLTLLSGGVGHREAFGASLVLGGAVFAG 186
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + ++ +L + + + + + L G G+L
Sbjct: 187 LAQVFIRKLVHTEATAAIVFYFSLTATLLSFVTLPFGWVWPTPAEAALLTGAGILGGVAQ 246
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + A S + EY + + ++ F+ + V +VV A ++ +
Sbjct: 247 ILLTSAYRHADASLIAPFEYASMIFALLIGFFVFAEVPTLVMLAGASLVVSAGILIIWRE 306
Query: 305 VINSGKNKTKK 315
+ ++
Sbjct: 307 RRLGLERARQR 317
>gi|145630070|ref|ZP_01785852.1| sodium/panthothenate symporter [Haemophilus influenzae R3021]
gi|144984351|gb|EDJ91774.1| sodium/panthothenate symporter [Haemophilus influenzae R3021]
Length = 482
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/296 (10%), Positives = 91/296 (30%), Gaps = 19/296 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++W + + + + + V+ R++ ++ V + +
Sbjct: 1 MLYQILALLIWSSSLIVGKLTYSMMDPVLVVQVRLIIAMIIVMPLFLRRWKKID------ 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + L + P++ VF+G F K++
Sbjct: 55 -KPMRKQLWWLAFFNYTAVFLLQFIGLKYTSASSAVTMIGLEPLLVVFVGHFFFKDKAKW 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARKTIPVGSSE 194
+ + + + I+ I + ++A + + S
Sbjct: 114 FHWLFGAMAFIGVAILINGGKNNEGIDNISLFGCLLVLSAGIIFAAVLRWTQRVVAKVST 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + ++ + L + L + + +++ G+
Sbjct: 174 QAYTSVSIVLGTITTLPFTLLLTENWQISLNSTGIAGLLYLAIGCSWLAYWLWNKGLNSV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ G++ PL I+ +V +L + + + I+++A + L + +
Sbjct: 234 DANISGVLVALEPLFGILFAVSLLGETLSFSAALGITIIMLATLGSTLLPKLLKNR 289
>gi|297539758|ref|YP_003675527.1| hypothetical protein M301_2593 [Methylotenera sp. 301]
gi|297259105|gb|ADI30950.1| protein of unknown function DUF6 transmembrane [Methylotenera sp.
301]
Length = 286
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 91/277 (32%), Gaps = 7/277 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G LF+ A L+ + +++L V+ V+ R + + + +
Sbjct: 8 KGILFICAAVFLFASSDALSKYLTNFYPVVMVLWVRYVVHVSLMLVVL------RPPSFK 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
TL + + + + FI AL + +++P++ + L ER+
Sbjct: 62 TLIVTQNRKLQIIRGLCMVNTNLMFISALHFIPLAEGTAIIYLSPLLVTSMSGPLLGERI 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
LQ IA + + +L + G +A+ +A F+ I
Sbjct: 122 ARLQWIAVAIGFIGVLFIVRPGGSMFHPVALLALGAALSFSVYQIITRKLNHTDRSSTTN 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I L + + + L ++ G+ + + AK ST+
Sbjct: 182 FISGLISALVTSVLLPFFWKTPTLYFALLMVLLGISALVSHLWMTKAYQHAKPSTLAPFS 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
YT L + Q D + + ++V ++
Sbjct: 242 YTQLLFAGLIGYVFFNQIPDFIGLVGMLVIVAGGLLV 278
>gi|317404920|gb|EFV85288.1| membrane protein [Achromobacter xylosoxidans C54]
Length = 302
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 93/295 (31%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G V ++ ++L + L+++ R L +LP V ++ G
Sbjct: 13 HSAFAGIACVAGGIFFLTLSDANAKWLGTTYNPLQILFLRALIALPFVTALAIWLGGRRV 72
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L D + + I V F L + F P+ L + L
Sbjct: 73 LRTDHPG------LHLTRGAINVVSACCFYLGLRALPLAEATAIAFAAPLFVTALSVLIL 126
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KER++ + +A L +LI+ + + +A+ +A I
Sbjct: 127 KERVDGRRWLAVLAGFAGVLIIVRPGTDAFQAATLLPLTTAFLYAVMMITARGISRGEGM 186
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +V + + + + D + L ++ + + G + A S V
Sbjct: 187 LTTTFYIVAGQLVCSAVALPWVWHTPAVADLPYFAAVALFSTLGLALITQGFRIAPASVV 246
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+YT + + ++ D + + + V L S K + +
Sbjct: 247 APFDYTGLIWATLLGWIFWREAPDAYAYLGALFIAGSGVYIALREARGSHKRRAR 301
>gi|310828624|ref|YP_003960981.1| hypothetical protein ELI_3049 [Eubacterium limosum KIST612]
gi|308740358|gb|ADO38018.1| putative membrane protein [Eubacterium limosum KIST612]
Length = 308
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 104/284 (36%), Gaps = 2/284 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ G LF+ + ++G TP+ + +L + + + R + +P ++ +
Sbjct: 1 MKSLKGNLFIILSACIFGFTPIMGKITYLNGSNSIMLTFLRTFFCVPVLWIILKQQKVSF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K LK + + + T L ++ + + T + FV +
Sbjct: 61 KLSKTQLKQLLIISFIGSAVTTLMLYQSYNYIPVGTATTLHFVYPVFVALGAILIFKEHL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K ++ L I A + + LL+L +T++ Y + + +
Sbjct: 121 TKPKILALVIATAGISFFMGGKIEGGLLGILLALVSGLTYAFYILYLDKSSLLALHPLKL 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ A F ++ F+G + + L + L +F G+K + +T
Sbjct: 181 SFYINLFVAGFVFIYGLFTGTLTLDITPMGWLLSFLVAMLCGFLGITLFQVGVKLSGGTT 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I+ P+ +V + L +PI + +++ + + +
Sbjct: 241 AAILSMFEPITSVVCGIAFLGEPITVKSVLGCALILTGVTILTV 284
>gi|283853911|ref|ZP_06371122.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
gi|283570703|gb|EFC18752.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
Length = 300
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 97/293 (33%), Gaps = 12/293 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G +V CA LWG+ ++ + +EV R + + + +
Sbjct: 1 MAGYAYVLCAAALWGLIGPLSKLSFAAGMDTVEVAFWRAAVA------WVFFAGQAVKNR 54
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ F +A +G ++ A+ L S + P + +FLKE
Sbjct: 55 ETRIAPRDLPAVIGFGVAGIAGLFGAYVVAVEAGGAALASVLLYTAPAWVALMSWLFLKE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ A + I + ++L G + I + G
Sbjct: 115 SMGGYKVAAVMATIAGVAGVSLGPGFSGQAAFSARAIGFGLLSGVTYALYYIFGKYYLGR 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + AL + L L + ++ G+KR + +
Sbjct: 175 YRTPTLFLYALPVGAFAMLPFVHFTRPTLAGAVPCLALAVLSTYGAYSLYYAGLKRLEAT 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ P++ V + + + T+ + G+++ ++++ + +
Sbjct: 235 RAAVVATLEPVIAAVLAYAMFGERFGTLGYLGAGLIIGSVLLTVWDGARERLR 287
>gi|322369399|ref|ZP_08043964.1| hypothetical protein ZOD2009_07919 [Haladaptatus paucihalophilus
DX253]
gi|320551131|gb|EFW92780.1| hypothetical protein ZOD2009_07919 [Haladaptatus paucihalophilus
DX253]
Length = 285
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 100/290 (34%), Gaps = 12/290 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +GT V + + +G + + +S+ V+ R + + V+ +
Sbjct: 1 MSDRLGTALVIVSAVGFGTLGILGKLASGAGLSIPTVLFFRFVLATALVWAGLAVRGRLR 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
TL +G L ++A + + L L + PVI V L ++F
Sbjct: 61 RFSGRTLLVGLGLGALGYAAMSGL-----YFWGLSFLTAGLVGILLYTYPVIVVVLSALF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP-----VGSS 193
L ER+ +A +L + + ++T I V +A I + +
Sbjct: 116 LDERITRRTGVALVLALAGVALITGGDPAGADPRGIVVVLAAAVVYASYITASRVALDAV 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ VL A Y+V+ +G + L + F G+ R
Sbjct: 176 PADLLTAHVLPAAACAYLVYGSATGTLSVPDSGSQWLIVAAIAVLATALPIFTFFAGLGR 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S I+ P++ ++ IL +P+ V + V+ +++
Sbjct: 236 IGASRASIVSTIEPVVTLLLGAAILAEPVTPVTVLGGASVLAGVLLVQAE 285
>gi|254512331|ref|ZP_05124398.1| Integral membrane protein DUF6 [Rhodobacteraceae bacterium KLH11]
gi|221536042|gb|EEE39030.1| Integral membrane protein DUF6 [Rhodobacteraceae bacterium KLH11]
Length = 309
Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 96/297 (32%), Gaps = 8/297 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
++ + G ++ A + + + L ++ ++ R + L + A+
Sbjct: 1 MTAPTDQNRPLAGMFWMLAAGLSFVGMNALVKVLGTSMNPIQAAFLRYVLGLVFLLPAL- 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ DT P+ + + + AV + +A+ + ++TP+
Sbjct: 60 ------RAIIDTPLTPRNLTLFGLRGVVHAVAVMLWFFAMTRIPLAEVTAMNYMTPIYVT 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
++FL E+L +I A + ++ +LI+ + S A+ + +
Sbjct: 114 LGAALFLGEKLAFRRIAAIAVAVIGVLIILRPGFREVQSGHFAMLGTTLALGGSYLLAKV 173
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
V+A +++ + + ++ + L + + ++
Sbjct: 174 MVRDIRPSAVVAHLSIWVTIALIPFAIAVWEPPSLQNLGILFVVASFATAGHYFMTLALQ 233
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A ++ + + + + + ID +++ A+ S
Sbjct: 234 AAPVAVTQPVTFLQLIWATLLGALAFHERIDAWVIAGGTLILAAISFITWREAKLSR 290
>gi|205372196|ref|ZP_03225011.1| hypothetical protein Bcoam_01600 [Bacillus coahuilensis m4-4]
gi|205374626|ref|ZP_03227421.1| hypothetical protein Bcoam_16301 [Bacillus coahuilensis m4-4]
Length = 300
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 105/303 (34%), Gaps = 12/303 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + L + I + ++ + L + +R+L+S + ++ S
Sbjct: 1 MNKSLPILSLIIGVISVSTSAIFVK-LSSADAGTIAFYRLLFSTILLLPYFLF----KSK 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
N K + + S LAVH+ + +L ++ + P+ + +F K
Sbjct: 56 ADLNHFNRKDWWLSLLSGLFLAVHFILWFESLNYTSVASSTVLVTLQPIFAFIGTYIFFK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVGSS 193
E ++ IIAA + ++ I++ + A
Sbjct: 116 EVISIKSIIAASIAMVGSFIISWGDFKVDGQALLGDMLALAACALVTGYLLIGQSLRKKL 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
V ++ +++ +G N FL+ +F++ IK
Sbjct: 176 TLTSYTFIVYGFSSVILLIYVLLNGEMLVGFSNDNWIYFLLLAIFPTLLGHSLFNWSIKY 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + + P+ + + +L + I + + I+++ ++++ +P + K ++
Sbjct: 236 ISTNVISVAILLEPVGATILAYLLLNESIYIYQIVGGMIIIVGILLFSIPVRLVIKKKRS 295
Query: 314 KKS 316
++
Sbjct: 296 IEN 298
>gi|187780222|ref|ZP_02996695.1| hypothetical protein CLOSPO_03818 [Clostridium sporogenes ATCC
15579]
gi|187773847|gb|EDU37649.1| hypothetical protein CLOSPO_03818 [Clostridium sporogenes ATCC
15579]
Length = 293
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/286 (16%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + +FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIIIKEKNIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKKDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANIFNINFNKGDILMIIAVLCWASYGVFSKKVMPKYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 MTLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYIAILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ IV S IL + I + + ++V + +
Sbjct: 243 IGPSKTSIFVNLVPISSIVLSAIILGEKITIITILSTALIVAGVYI 288
Score = 39.1 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 39/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + L
Sbjct: 4 SKVYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIIIKEKNIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KKDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|88858696|ref|ZP_01133337.1| membrane protein [Pseudoalteromonas tunicata D2]
gi|88818922|gb|EAR28736.1| membrane protein [Pseudoalteromonas tunicata D2]
Length = 286
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 101/285 (35%), Gaps = 9/285 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF+ A L+G T L+ + + + +++ +R + + ++ + L
Sbjct: 8 LLFLHSAVFLFGGTALFAKLI-GLPAIDITVYRTAVAAIALLTLMLISKKQIRL-----S 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N K + VF I+ +HW + + + ++F PVI+VFL K
Sbjct: 62 NKKDYAIAVFLGIIIGLHWITYFGGMQLAGVTIGVIAFFCYPVITVFLEPFITKTTPKLS 121
Query: 147 QIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I A ++ L + ++ L +A+ V + + R + +L
Sbjct: 122 DFICACIVCLGIYLLVPQANLGNDVTLGIALGVISAFFFALRNVTHRHYFSRYGGPHTML 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ + F + + L L+ + + +F+ ++ T G++
Sbjct: 182 YQTLVACIMLSLFVEVPPSEVTDTDWLLILLVGVVFTALPHSLFASSLQHLSAKTAGLIS 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
PL + + IL + + + +VV A
Sbjct: 242 CLQPLYGSILAWLILHEEANLSTILGGLLVVSAAFYETWAVTRKK 286
>gi|291226990|ref|XP_002733472.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 362
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/328 (12%), Positives = 103/328 (31%), Gaps = 24/328 (7%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWS 63
G K + + + +A + +G +F F + + + + + + V LE+ R++
Sbjct: 25 GENKNQVVRKKRRCSAISSSHIGMVFAFISCMFFAGSFTGAKMVTTVHPLEITFVRMVIQ 84
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
V ++ + +N L+ + A+
Sbjct: 85 NACVTPIMLC-----KNISFRGENAYQYRWLISRGVTGCLSVTCVFIAVHLMPVGDAVVI 139
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS------------------ 165
+F P+ + FL + LKE + + + AL+ ++ ++++
Sbjct: 140 FFTNPIYTAFLSCMCLKESIKVIDFLLALISVIGVMVILKPQFLFSGSSQNTTLTEVESS 199
Query: 166 -GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL 224
+ A A + +G + + ++ + F ++
Sbjct: 200 ESLLGALFAFFGALFAAMVFVSSRKLGKKVSYLTIIFYYSVCGIITTSTLLFILDKYSLP 259
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
D F++ GL + + ++ K V I+ + + D
Sbjct: 260 QTPHDWFFIVFVGLCGVGGQILLTKALQYEKAVYVSIIRTMDIVFAYIFQYLWYGSKPDW 319
Query: 285 VRTIVFGIVVIAMVVYLLPTVINSGKNK 312
V + +V I+ V L + ++K
Sbjct: 320 VAMLGAILVTISSVGIALKRWYYAKQDK 347
>gi|110802948|ref|YP_698637.1| hypothetical protein CPR_1317 [Clostridium perfringens SM101]
gi|110683449|gb|ABG86819.1| putative membrane protein [Clostridium perfringens SM101]
Length = 287
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 93/292 (31%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + + +E R L S F+ +
Sbjct: 2 NNKTKGIILITISALSFALMSTFVKLSGDLPSIEKSFFRNLVSCFVAFYLV------KKD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ + + + YA+ + ++P + +FLK
Sbjct: 56 NAVLFGQKENRLALIGRSALGTLGIWANYYAIDRLILSDATILNKLSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L + II L +L + SG AI SA V G
Sbjct: 116 EKLKPIHIICLLAAFSGVLFIVRPSGNLASNFIPAIIGLCSAAFAGGAYTFVRYLGGKEK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F +V F ++ +FLI G+ S + K A
Sbjct: 176 GATIVFFFSFFSIVTTFPIMLFQFETFSLEQFVFLILAGVAASCAQFALTAAYKYAPARD 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +YT + + + D + I + ++++A L + K
Sbjct: 236 ISIYDYTQVIFTALIGFVLFGDIPDKISLIGYALILLASFSIFLYNKKEANK 287
>gi|317497392|ref|ZP_07955714.1| integral membrane protein DUF6 [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895312|gb|EFV17472.1| integral membrane protein DUF6 [Lachnospiraceae bacterium
5_1_63FAA]
Length = 287
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 85/283 (30%), Gaps = 4/283 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + + + + L+ + + +E R L + F I+ ++
Sbjct: 6 RGIICIILSAFSFALMALFLKLSGDLPAIEKSFFRNLVAAVIAFIMII---RNKEKIQIQ 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+N + T+ + + L+ + ++ +L
Sbjct: 63 KRNLHWFILRSLFGTLGIFCNFYAVDHLVLSDASCLNKLSPFFVIVFSYLVLKEKITPTQ 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+IAA + L ++ + G+ ++ FA + G M VL
Sbjct: 123 CACVIAAFVGSLFIVKPSFAGGMTPAAVIGFAGGMCAGFAYTCVRKLGLRGERGPMIVLF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + + + L GL + + A + + +Y
Sbjct: 183 FSTFSMLACVPYLIMDFHPISARQLFFLL-LTGLAAAGGQFGVTAAYTYAPAREISVYDY 241
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
T + + F+ Q D + + + +++ A V+ L
Sbjct: 242 TQIMFSAIMGFFVFGQLPDMLSFVGYCVIIAAGVIMFLYNKRR 284
>gi|282880457|ref|ZP_06289164.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1]
gi|281305560|gb|EFA97613.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1]
Length = 340
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/314 (10%), Positives = 104/314 (33%), Gaps = 5/314 (1%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLW 62
+T++ + K+ + + G + + +G+ PL++ + V+ +R +
Sbjct: 21 STRQLVNSSTKKKEHPMNKIHGFVGAITSATAFGLIPLFSLPVLATGMPSTAVLVYRFAF 80
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+ + ++Y L L + + + + + ++ + + +
Sbjct: 81 ACLIMLVVLMYQRQSLHLRFGESLRLMLLSTMYTGSAVFLMEGYRYLSSGIATVIMFSYP 140
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSA 180
+ ++ L +A + + + + + + L + ++++
Sbjct: 141 VWTALLMMIFRGEKASGTTFLAIGLAVAGVCFLSGIENGVGNISVLGICLELLSGLSYAI 200
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLL 239
Y A T+ + + + + L +++ F+ G + L
Sbjct: 201 YMVAYPTMNIRTIPTIKVNFYIFFFTMLLLMLYAIFTSGRLPAIHTGTVLLNLFLLGLLP 260
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+K + V I+ PL + + + +P I F +++IA+ V
Sbjct: 261 TVVSNITLILSLKSIGSTLVAILGAFEPLTAMCIGIMVFGEPFTVHIAIGFVLILIAVAV 320
Query: 300 YLLPTVINSGKNKT 313
+L + K +
Sbjct: 321 LILKNAHHKTKAEK 334
>gi|227820668|ref|YP_002824638.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227339667|gb|ACP23885.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 310
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 76/300 (25%), Gaps = 3/300 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + GTL VF + W +FL ++ R L++ + ++
Sbjct: 7 TSASFGANEKFGTLLVFGSAFFWSFGGAIARFLHISDSWTIVFWRCLFAGLFLLAFMLVR 66
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G + V FI A+ P+ + +
Sbjct: 67 DGPRGTVSLV---RGMGWPGVAVGLCFTTASTSFIIAISYTTIANVVLLGAGVPLFAALM 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
V +ER++ A +I + IM S +S V +
Sbjct: 124 SWVLFRERVSRFTWGAIAAVIFGVAIMVSESLNGSVSPVGDALALLIPVVFALATVITRR 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ M F S + L +F G +
Sbjct: 184 YPHVRMTPATCFGCFAASAIAASQSSDLSVTPGELALLFAFGAFNLGLGMALFVTGARLV 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ +L V I + + + +A++ YL +
Sbjct: 244 PSALAALLGTAETVLAPVWVAIIHGEVPSGRTIVGGVFIFLALLAYLFNEFRGQRNGPRR 303
>gi|331086400|ref|ZP_08335480.1| hypothetical protein HMPREF0987_01783 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406166|gb|EGG85689.1| hypothetical protein HMPREF0987_01783 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 303
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/291 (10%), Positives = 84/291 (28%), Gaps = 17/291 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++WGI ++ + L Q S +E+ R + F ++
Sbjct: 2 NKRSKGIALAVITAVMWGIMGIFVRDLSKYQFSNIEISFFRCALAGAAYFVFLLITKP-- 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +V+ A ++ + + A+ + + F++P+ LG
Sbjct: 60 --AALKINLKGIIICIVYGAVAYSISFVSYSVAVSRIPVGVATVLMFMSPIWVAILGRFM 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-----------LAIAVTWSAYCFARKT 187
E+L +II + ++ +++ G + I V
Sbjct: 118 FGEKLEKSKIITIFVCLIGAILVANLIGGGNIKLDAIGILAGVVNGIGVALQILLPKFFA 177
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
A+ LF + + +
Sbjct: 178 KDYDRDTLLVYGFLGAAVALLFGMDFGAVAEHFAAAPVTNLLWDLFGIGIFCTMVANVAC 237
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + +T I+ ++ + + + + ++ I I+V+ +
Sbjct: 238 VKSTQYVEATTTSILSALEVVVGTLVGFLVFHEHLTILQMIGAVIIVVGAI 288
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 44/126 (34%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
AV W + + I A+ Y V+ + + + ++
Sbjct: 15 AVMWGIMGIFVRDLSKYQFSNIEISFFRCALAGAAYFVFLLITKPAALKINLKGIIICIV 74
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ S F +S + R + ++ + +P+ + + F+ + ++ + I + +
Sbjct: 75 YGAVAYSISFVSYSVAVSRIPVGVATVLMFMSPIWVAILGRFMFGEKLEKSKIITIFVCL 134
Query: 295 IAMVVY 300
I ++
Sbjct: 135 IGAILV 140
>gi|108800057|ref|YP_640254.1| rarD protein [Mycobacterium sp. MCS]
gi|119869183|ref|YP_939135.1| transporter DMT superfamily protein [Mycobacterium sp. KMS]
gi|126435690|ref|YP_001071381.1| transporter DMT superfamily protein [Mycobacterium sp. JLS]
gi|108770476|gb|ABG09198.1| rarD protein [Mycobacterium sp. MCS]
gi|119695272|gb|ABL92345.1| RarD protein, DMT superfamily transporter [Mycobacterium sp. KMS]
gi|126235490|gb|ABN98890.1| RarD protein, DMT superfamily transporter [Mycobacterium sp. JLS]
Length = 312
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 66/275 (24%), Positives = 128/275 (46%), Gaps = 4/275 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF AY+ WG+ P + L LE+++HR++WS+ + +
Sbjct: 1 MTETRRNGLLFGIGAYVWWGLCPGFFLLLLPAGSLEILAHRIVWSVVFLLLVLAVARRLG 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LL+ + + + ++ +++ +WG +IYA + YF+ P++SV LG +
Sbjct: 61 DLLRLSWRTWLQLLA---ASALVSANWGVYIYAATHSHVVDAALGYFINPLLSVALGVLV 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFF 197
+ER+N Q +A +L + +++++T+ G P A+AV+++ Y +K +
Sbjct: 118 FRERINRSQQVALVLAVAAVVLLTVEIGAPPYIALALAVSFALYGLVKKVVTADPRVSVA 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E + A YV+ + HF + T L+ G + + +F +R L
Sbjct: 178 VETLIALPFAGGYVLALELTDRGHFLSEGLAHTGLLLLAGPVTAIPLLLFGAAAQRLPLV 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
T+G++ Y P L + V I +P+ R I F +
Sbjct: 238 TLGLLFYINPGLQMAWGVVIGHEPMPVGRWIGFAL 272
>gi|84515956|ref|ZP_01003317.1| putative transporter, RhaT family, DMT superfamily [Loktanella
vestfoldensis SKA53]
gi|84510398|gb|EAQ06854.1| putative transporter, RhaT family, DMT superfamily [Loktanella
vestfoldensis SKA53]
Length = 325
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 91/288 (31%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P G L A+ ++ + + L + S ++++ VL S P ++
Sbjct: 2 TPNAKGALIALAAFGVFATHDVVVKILGGIYSPVQIVFFSVLLSFPLATMMLM------R 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K P ++ A + YA F +P++ L L
Sbjct: 56 DSKPGTLVPTHPWWMLTRAVATVITGFTAFYAFSVLPLAQVYTILFASPLLITVLAIPVL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + A ++ ++ +L++ L +A +A + +I V
Sbjct: 116 GETVRIRRWAAVIVGLIGVLVVLRPGSTELSLGHLAALMAAIGGSIASIIVRKIGSEERP 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L P V + + I L + + + + + +
Sbjct: 176 VVMLLYPMALNFVVMAAALPFVYEPMPIDHLGMLGIIAVFAWIASRMIISAYQAGEAAII 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
M+Y+ + V + ID I I++ + + +L +
Sbjct: 236 APMQYSQIIWASVFGFVFFDEMIDLNTAIGASIIIASGLYIVLRESRS 283
>gi|312797611|ref|YP_004030533.1| transporter, drug/metabolite exporter family [Burkholderia
rhizoxinica HKI 454]
gi|312169386|emb|CBW76389.1| Transporter, drug/metabolite exporter family [Burkholderia
rhizoxinica HKI 454]
Length = 338
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 86/302 (28%), Gaps = 5/302 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
+ M G + CA + + + +F+ Q E+ R+L+ L
Sbjct: 30 SKLIDSRIMRGIALMLCAVFFFSLVGVIAKFIAAQYPPNEIAFFRMLFGLIPAMLVFRRL 89
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + ++ L T + FV V L
Sbjct: 90 EFNKKEFTLSRFGGHFLRAAMALGSMGTFLSSLLYLPLSTAVTLHYLETIFVAVFAVVCL 149
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G L L + + ++S L G + SA A I +
Sbjct: 150 GERLRMGVLGGLIVGLGGVTLISP----LTGGYASVLGTGLGVLSAVFGAGAVIQIKRLS 205
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ L + +G S + ++ D + GL + + K A
Sbjct: 206 RTEEPTVIVLYFTLIGTIVSGLSLWVSWTTPSMEDLALMALLGLTAGTGQLLLTTAFKNA 265
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S + + Y + I+ I + I + ++V + + L +T
Sbjct: 266 PASLLAPLSYFGVVWSILFEYVIWGELIGLQAALGAVLIVGSALCVSLSGRRIDSYARTS 325
Query: 315 KS 316
+
Sbjct: 326 TA 327
>gi|86750364|ref|YP_486860.1| hypothetical protein RPB_3253 [Rhodopseudomonas palustris HaA2]
gi|86573392|gb|ABD07949.1| Protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris HaA2]
Length = 310
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 99/306 (32%), Gaps = 11/306 (3%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLP 65
E S+ L+ +A P + G + + + ++L + +E+ R L L
Sbjct: 4 ANESSRRLTARHADHP-LRGIALIVASTAFLACSDTMAKYLGRTLPPIEIGWIRFLVFLL 62
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ ++ + L + + V A L FI L S + F
Sbjct: 63 IMLPVMLTSASPLRSARPK--------LQVLRALALVASSVLFITGLQFLPIAEASATSF 114
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
V P+ L V L E + + A + +L +LI+ + AI SA +A
Sbjct: 115 VAPLFVTALSIVLLGEAIGIRRWAATAVGLLGVLIVIRPGSAAFNAAAIFPILSALTWAF 174
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I G + + AL V + + D L + GL ++
Sbjct: 175 TLILTRMISGADRVVVTMTFSALVGFVALSAMVPFVWVTPSWHDILIGVLVGLASTMGQW 234
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
I + A S + Y+ + + + + D + +++ + +Y
Sbjct: 235 IVVLAYRYADASVLAPFTYSQLVWVTFLGFGVFGEIPDLWTFVGAAVIMAS-GIYTAHRE 293
Query: 306 INSGKN 311
K
Sbjct: 294 RLRRKQ 299
>gi|288961174|ref|YP_003451513.1| drug/metabolite transporter [Azospirillum sp. B510]
gi|288913482|dbj|BAI74969.1| drug/metabolite transporter [Azospirillum sp. B510]
Length = 314
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L + A +L I + L + L EV R L++ + + +
Sbjct: 15 NVRLGILSMLLAMVLMTIMNALAKILAETYPLGEVTFFRNLFA------LLPAVAMVAAA 68
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ A + +A + P+ L L
Sbjct: 69 GGRSCLRTDHRLGHLWRAIVGLASMVLLFWAYHLMPLANAVAISYSAPLFLTALSVPLLG 128
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ + A ++ +LIM + A+ +A +A I + +
Sbjct: 129 ERVGPFRWGAVVVGFAGVLIMVQPGPDMIDRGAMVALTAAVSYALAMIAMRQLGRTERPV 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + + + + + + L + G G+ + A+ VG
Sbjct: 189 TTVFYFTVISTLLSALALPFGWTMPDGHGLLLMAGMGIAGGGAQYFSTRAYSLARAVVVG 248
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + + + +V+ + ++ L
Sbjct: 249 PFSYASLIYATILGWLVWGDVPAPHVLVGAAVVIGSGLLILYRETRR 295
>gi|225174402|ref|ZP_03728401.1| protein of unknown function DUF6 transmembrane [Dethiobacter
alkaliphilus AHT 1]
gi|225170187|gb|EEG78982.1| protein of unknown function DUF6 transmembrane [Dethiobacter
alkaliphilus AHT 1]
Length = 292
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 84/276 (30%), Gaps = 9/276 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + + + + + + + +E + R + F I+ G
Sbjct: 6 KGILLMIASSVFFALMATLVRLSGDLPTMEKVFFRNVVGFAVSAFLILRSRGSF------ 59
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L A V F+ YA+ +P + L ++L+E++
Sbjct: 60 --WGVDKRALFIRAFFGFVALVFYFYAIDNLPLANAVILNQTSPFFVLILAFLWLREKIR 117
Query: 145 HLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A + + + ++ L I + + A + V
Sbjct: 118 KPQWVAIIFALFGVSLIVQPGLDYELFPAIIGLLSAVLAAAAYAAVRHLRLTDQPQTIVF 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ F F + ++ L L+G G+ + + +Y + + + I
Sbjct: 178 YFTGFTTLATLPFLIFGEFVMPDLFQFLALLGVGITATIAQFLMTYAYRYCEAGELSIYA 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y + + + I + D V + V+ +
Sbjct: 238 YGNTITAMFLGLLIFGELPDIVSLLGVTFVLFGAYL 273
Score = 37.2 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 35/119 (29%)
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ G M + + + F D L
Sbjct: 21 MATLVRLSGDLPTMEKVFFRNVVGFAVSAFLILRSRGSFWGVDKRALFIRAFFGFVALVF 80
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y I L+ I+ T+P +++ + L++ I + + + + + + P +
Sbjct: 81 YFYAIDNLPLANAVILNQTSPFFVLILAFLWLREKIRKPQWVAIIFALFGVSLIVQPGL 139
>gi|326792476|ref|YP_004310297.1| hypothetical protein Clole_3412 [Clostridium lentocellum DSM 5427]
gi|326543240|gb|ADZ85099.1| protein of unknown function DUF6 transmembrane [Clostridium
lentocellum DSM 5427]
Length = 307
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 3/301 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPL-YTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
++P +G L + I+WG + ++ L+ +S +I+ R + I+++
Sbjct: 2 TNTKNIPKGIGDLLLLITAIVWGGGFIGVSKSLDTLSPFYMIAIRFAIASV--LMIILFW 59
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
++ K+ L +G +F +I + VF
Sbjct: 60 KKFKAIKKEDLLPGCMIGTFLFLGFTFQTVGALYISVGKLSFLTALNVIIVPFLTFVVFK 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ + L + + G+ L + + A +
Sbjct: 120 QHIKKYNLIAGLIAVVGFGFLNLNQEAGFSIGVGELLGILCAVFFAAHITVLGQYADKMD 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + + + + + F + G K
Sbjct: 180 AIVLAILQMITCCVLGFICALLFEEPPKAITMEMAIPVVYLGVFSSFCAFLCQTIGQKYT 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S I+ + SV ILK+ + I +++ A++ V + K
Sbjct: 240 SASRAAIILCMESVFGTALSVLILKEALTLQMIIGATLILAAVITAEYMHVRSEKSETAK 299
Query: 315 K 315
+
Sbjct: 300 E 300
>gi|323485675|ref|ZP_08091013.1| hypothetical protein HMPREF9474_02764 [Clostridium symbiosum
WAL-14163]
gi|323695147|ref|ZP_08109286.1| hypothetical protein HMPREF9475_04151 [Clostridium symbiosum
WAL-14673]
gi|323401025|gb|EGA93385.1| hypothetical protein HMPREF9474_02764 [Clostridium symbiosum
WAL-14163]
gi|323500805|gb|EGB16728.1| hypothetical protein HMPREF9475_04151 [Clostridium symbiosum
WAL-14673]
Length = 302
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 88/293 (30%), Gaps = 2/293 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSG 76
G V + +L+G P + + + + L + HR S+P ++ + Y
Sbjct: 1 MRERMKKGFSLVILSAVLFGTMPFFAKQIYGMGGNSLTLCFHRFCLSIPFLYLIVRYKYK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ V L + T L + + + V VF
Sbjct: 61 ISLKITGREFRKILVLSLCCAGTPLLLFQSYRYIPSGMATTIHFVYPILVLLGCVVFYRE 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ + ++ + L+ A VT++ Y + F
Sbjct: 121 RLTVKKSVCAALCLLGILFFYTPGESGSPAGVALAFASGVTYALYVLYYSKSGLAEMNTF 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + + + SG + + L ++ +++ F G R
Sbjct: 181 KLSFYLSLVSSAGILAGAVLSGKIVYEMPPQAWLLSVLFAFIVSVVATVSFQAGTARIGP 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ PL I + V + +P+ ++ A+++ ++
Sbjct: 241 EKSSMLSTFEPLTSIAAGVVLFSEPVTPRTAFGIACILCAVILLAYGDRSSNK 293
>gi|163795861|ref|ZP_02189825.1| hypothetical protein BAL199_20645 [alpha proteobacterium BAL199]
gi|159178894|gb|EDP63430.1| hypothetical protein BAL199_20645 [alpha proteobacterium BAL199]
Length = 309
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 9/311 (2%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVL 61
+ +T + G + + +S P + G + A +L+ + L + V V+ R
Sbjct: 6 ESSTPTAPASGGAADTSSDPAV-GIGLLVFAELLFATMDTAAKHLSGEMPVGMVVWGRYA 64
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
+ L + ++ + VG+++F L F A+
Sbjct: 65 FHLAFMLPFLI------RRHPADVLRINRVGLVLFRGVQLLAGTTCFFTAIRYIPLADAV 118
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY 181
FV P+ V L L ER+ + +A L+ + ++ + V A
Sbjct: 119 AIGFVAPLFVVALSVPLLGERVGPRRWMAVLIGLGGTFVIIRPGFAEVHWAYGLVILLAL 178
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
FA I + +L AL + ++ + G L
Sbjct: 179 IFASFVITTRILTRTEQTIPMLFYTALVGTAGASLILPFVWQTPSLEQWGLMALMGALGG 238
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + + A S + +Y + + D +++A +Y+
Sbjct: 239 TSHLLLIHAYRVATASLLAPFQYAQIVFATFYGWLVFNDFPDRWMIAGTT-ILVASGLYV 297
Query: 302 LPTVINSGKNK 312
L + K
Sbjct: 298 LHREAQINRQK 308
>gi|218532505|ref|YP_002423321.1| RarD protein, DMT superfamily transporter [Methylobacterium
chloromethanicum CM4]
gi|218524808|gb|ACK85393.1| RarD protein, DMT superfamily transporter [Methylobacterium
chloromethanicum CM4]
Length = 294
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 8/291 (2%)
Query: 25 MGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG ++ AY+ WG+ P++ + L+ + +++ R+ WS V I L+
Sbjct: 1 MGLIYALAAYLSWGLVVPVHFRLLDGIPPGTILAQRIAWSALLVVGLIALLRKRLANPFP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
G+LV SA ++A++W ++ A+ + S YF+ P++SV LG++ L ERL
Sbjct: 61 L---RPRHGLLVVSAGLIAINWMLYLVAVSSGHMLDASLGYFINPLVSVALGALVLGERL 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q++A +++L ++I +G + A FA +
Sbjct: 118 RPVQVVAVAIVVLGVVIAVAMAGRL----PLLSLGLAVTFALYGLVRKLVAVDGTVGFCA 173
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + L G+ + F+ R L+T+G+M+
Sbjct: 174 ETFLLLPAALAYLAFVAPPVPDDAHTWALLALTGVTTALPLIWFAAAATRLTLATLGLMQ 233
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y AP ++ S + + + R ++FG++ +A+++Y + + + +
Sbjct: 234 YIAPSCLMGLSTLVYGETLTPDRLVLFGLIWLALMLYAYDAIRHERRRRAA 284
>gi|238022479|ref|ZP_04602905.1| hypothetical protein GCWU000324_02387 [Kingella oralis ATCC 51147]
gi|237867093|gb|EEP68135.1| hypothetical protein GCWU000324_02387 [Kingella oralis ATCC 51147]
Length = 301
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 73/300 (24%), Positives = 133/300 (44%), Gaps = 5/300 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G Y +WG+ PL+ L + ++++ R++WS ++ FS
Sbjct: 4 STLSEQRKGIWLALACYGIWGLFPLFWYPLNHSAMPAEQILAQRIVWSSVFALALLLAFS 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G +L+ + PK + M S+ ++A +W +++A++ S YF+ P+ +V LG
Sbjct: 64 QGRALVVAF-RQPKVLAMFALSSLLIAANWLIYLWAIVHHHVVEASLGYFINPLFNVLLG 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSE 194
V KERLN QI A L + + + + +G P +SL +A ++ Y RK P+
Sbjct: 123 FVLFKERLNAWQIAAIALALAGIAWLAVPAGQIPWISLFLAFSFGFYGAVRKLAPMPPLA 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G +E +L AL Y+ W G F L G + F+ KR
Sbjct: 183 GLTLETLMLLPFALGYLAWCGMQNTLVFGELTPLQKTVLFASGAATTLPLLAFAAAAKRI 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS +GI++ +P ++ + + R I +G+V + ++V+L + + K
Sbjct: 243 TLSLLGILQNLSPTAQLLLG-LAFGEQLSGARLIGYGLVWLGVLVFLYGVGLQMKREKAA 301
>gi|153002283|ref|YP_001367964.1| hypothetical protein Shew185_3777 [Shewanella baltica OS185]
gi|151366901|gb|ABS09901.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS185]
Length = 293
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 117/299 (39%), Gaps = 9/299 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G + + A +L+G T L+++ + +S L++ R + + + + L
Sbjct: 1 MSSAKPSGLIELHLAVLLFGGTALFSKLI-PLSALDITFLRCIVAATVLGLLV-----KL 54
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + TL + + + + I+++HW + A+ + ++F PV++V +
Sbjct: 55 SHRRLTLASKQDYLVAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
R+ L II+ L+++ ++++ L +AI + + AR +
Sbjct: 115 TGSRIKLLDIISGALVLIGVILLIPEANLGNDTTLGIAIGIVSAILFTARNLLHKRYFSQ 174
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V + E + L ++ + + +F+ +++
Sbjct: 175 YSGPHAMFYQTLVAVVFLMPWHQTELNSISLEVWGLIILLGVVFTAAPHALFTSALRQLS 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
TVG++ P + ++ IL + ++ I I+V + + + + K
Sbjct: 235 AKTVGLVSCLQPFYGAMLALIILGEELNLNTIIGGTIIVATAIFETHQSHQSQRRKKNA 293
>gi|313680600|ref|YP_004058339.1| hypothetical protein Ocepr_1713 [Oceanithermus profundus DSM 14977]
gi|313153315|gb|ADR37166.1| protein of unknown function DUF6 transmembrane [Oceanithermus
profundus DSM 14977]
Length = 290
Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 85/291 (29%), Gaps = 9/291 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G +++ A W + ++ ++ +EV R L+ +
Sbjct: 5 GYVYMLLAASSWALIGPVSRLALDSGIAPVEVAFWRALFGGALFALHAWARRLPRPHGRS 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
G ++F +A+ + + YA+ L S + P V FL + +
Sbjct: 65 ------LGGAVLFGVLGVALFYLSYQYAVAYGGAALASVLLYTAPAWVVLGSRAFLGQPI 118
Query: 144 NHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L +L + ++ G + + + G +
Sbjct: 119 RPYGAGLVALTLLGVTLLAWPLGGWAFNAAGVVWGLVSGLAYAGYYVYGKLQFARFHPVA 178
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL + + + + + G++R + + ++
Sbjct: 179 LLAVALPVGALVLLPWVDFVHKDAAVWAALAVLSVVSTYLAYLFYGLGLRRLEATRASLV 238
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P+L + + + + + +VV+A+ N +++
Sbjct: 239 ATLEPVLASLLAFVWWGERFSLLGYLGAALVVLAVAGTAAEPWFNRRRSER 289
>gi|76809522|ref|YP_333985.1| hypothetical protein BURPS1710b_2593 [Burkholderia pseudomallei
1710b]
gi|76578975|gb|ABA48450.1| putative membrane protein [Burkholderia pseudomallei 1710b]
Length = 825
Score = 83.4 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 21/299 (7%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+EN TL + +WG+ + L + V ++ S+ F ++
Sbjct: 512 QENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVAS-AATSIVACAFVLIVRR 570
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++ ++ +L V F++ + + +++TP +
Sbjct: 571 KSIATVR-------RHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICA 623
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKT 187
L+ERL A L + ++M S + A A
Sbjct: 624 HFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVV 683
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP-----DTLFLIGYGLLNSF 242
EM + A + + E L ++G G+ +
Sbjct: 684 KASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAA 743
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +G+ R + I+ ++ +++ + +V+A ++
Sbjct: 744 NNMLVQHGLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSS 802
>gi|292669475|ref|ZP_06602901.1| DMT superfamily drug/metabolite transporter [Selenomonas noxia ATCC
43541]
gi|292648928|gb|EFF66900.1| DMT superfamily drug/metabolite transporter [Selenomonas noxia ATCC
43541]
Length = 295
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 84/294 (28%), Gaps = 6/294 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L + A WG T + +E + + R + + + G +
Sbjct: 2 HLRGNLMLLAASFFWGTTFVAQILGMEGLGPYTYAAFRFALGVIFMGGLWFLYRGKRAAE 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ALL T+F ++ V L +V L
Sbjct: 62 RRAGTFRSGFRAGIPVGVAMFAGVTLQQVALLYTTAGKTAFIT-TLYIVLVPLAAVALGH 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFF 197
R+ Q I+A+L + ++ + + + + I + + +
Sbjct: 121 RIRTAQWISAVLAFAGVYFLSAYGEMTINKGDVLVFICSLFWMAQILLIDRFARTVDAIE 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + L + G + +
Sbjct: 181 LCLTEMIVCMFGSAALAAAYESFAWTDVWSAAIPILYAGVFSCGVAYTCQILGQAYVEPT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
I+ + V+ +L + + V+ + +++ ++ +P +
Sbjct: 241 QASILLSLEAVFAAVTGWIVLGETMTAVQILGCALLLGGALMTQIPKRTGKRRK 294
>gi|167569316|ref|ZP_02362190.1| hypothetical protein BoklC_05687 [Burkholderia oklahomensis C6786]
Length = 310
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 92/301 (30%), Gaps = 16/301 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAI 71
S A + G L+V + +G ++ ++ VL ++ R + +
Sbjct: 2 TSAAEAPSAALRGALYVALSAAAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLAVIA 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ ++ A + AL Q L + ++ P
Sbjct: 62 ------RRRRVSWPRGRALGAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFV 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
L + +L ERL + +A L + +M L +A+A+ + +
Sbjct: 116 TLLAAWWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAK 175
Query: 192 SSEGF--------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
++ G + AL V F H+ + +
Sbjct: 176 AARGVDPLATVAIICCAAAATLVALALVRTVAFDAPPHWPRAASGWAALVAIALVSTVAA 235
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F G++R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 236 MLAFFAGLERLGAARTSMLSTLEPVVTVALAASLFGETLTPLQWAGGVAILAAVLWLVRA 295
Query: 304 T 304
Sbjct: 296 G 296
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALGAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|115352418|ref|YP_774257.1| hypothetical protein Bamb_2367 [Burkholderia ambifaria AMMD]
gi|115282406|gb|ABI87923.1| protein of unknown function DUF6, transmembrane [Burkholderia
ambifaria AMMD]
Length = 309
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 94/290 (32%), Gaps = 16/290 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S P + G L+V + +G ++ ++ V VL ++ R + +
Sbjct: 7 SSSPALQGALYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAILAAIARHRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ V ++ A + AL Q L + ++ P L +
Sbjct: 67 AWP------RGRTLVPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A +L + +M L +A+A+ + ++ G
Sbjct: 121 WWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALASAVIYSLYIVGGTKATRGV 180
Query: 197 FIEMCVLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I A+ V F + L + F
Sbjct: 181 DPLATTAIICLSATATLVAIAIVRTAAFGVPPRWPATTAGWASMLAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G++R + ++ P++ + + + + + ++ + ++ A++
Sbjct: 241 AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWVGGVAILAAVL 290
Score = 39.1 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%)
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + L + ++ A+ S V ++ Y P + + + +
Sbjct: 63 HRRVAWPRGRTLVPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWW 122
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPT 304
L + + + + + V + +
Sbjct: 123 LGERLTRAKAVALVLCVAGSALMVGGG 149
>gi|254251791|ref|ZP_04945109.1| hypothetical protein BDAG_00989 [Burkholderia dolosa AUO158]
gi|124894400|gb|EAY68280.1| hypothetical protein BDAG_00989 [Burkholderia dolosa AUO158]
Length = 309
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 91/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + +G ++ ++ V VL ++ R +
Sbjct: 7 SSSVALQGALYVALSAAAFGAMAIFGRYAYAADVDVLGLLIVRFAIGGALLAAIAHRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 VWP------RGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A +L + +M L +A+A+ + ++ G
Sbjct: 121 WWLGERLTRAKAVALVLCVAGSALMVGGGRGEPLGIALALAAAVIYSLYIVGGTKATRGV 180
Query: 197 FIEMCVLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I A+ V F + L + F
Sbjct: 181 DPLATTAIICLSATATLVAIAVVRTAAFGTPPRWPATADGWASMLAIALVSTVTAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G++R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLERLGAARTSMLSTLEPVVTVALAALLFGEALTPMQWAGGVAILAAVLALVRAG 296
Score = 41.0 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALVLCVAGSALMVGGGR 150
>gi|284046993|ref|YP_003397333.1| hypothetical protein Cwoe_5553 [Conexibacter woesei DSM 14684]
gi|283951214|gb|ADB53958.1| protein of unknown function DUF6 transmembrane [Conexibacter woesei
DSM 14684]
Length = 332
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 90/304 (29%), Gaps = 10/304 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ G L A + +G + + + V +++ + +
Sbjct: 1 MNASPQISRERQGLLLCALAAVGFGTMGVLAKLAYAAGANVLTLLSVRFAVGALLLWAIA 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + A+G L+ + + G + AL L F P I V
Sbjct: 61 AHRG---VARIPSRRAALGALLLGLLLYSAESGLYASALTHIDASLAELLMFTYPAIVVL 117
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS- 192
+E+ + ++ A + ++++ L + + +
Sbjct: 118 AAIALRREQPSQRRVGAVAIASSGVVLVLLGGSTGAIDPVGVGLALGAALLYAVYVLSAD 177
Query: 193 ------SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
F + F VV + L + +
Sbjct: 178 ALGGRLHPLTFAALICTGAAISFSVVGGASGSLQLGGLAGEAWLWIGVIGVASTAVGMSA 237
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F G++R S IM P++ +++ + + + ++ +VV AM+V LP +
Sbjct: 238 FVAGVERLGPSRASIMSALDPVVAVIAGAAVFSERLGPIQIAGGLLVVSAMIVLQLPALA 297
Query: 307 NSGK 310
+
Sbjct: 298 RRRR 301
>gi|291297277|ref|YP_003508675.1| hypothetical protein Mrub_2908 [Meiothermus ruber DSM 1279]
gi|290472236|gb|ADD29655.1| protein of unknown function DUF6 transmembrane [Meiothermus ruber
DSM 1279]
Length = 297
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 100/283 (35%), Gaps = 9/283 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M+G L+V A LWG+ + +++ + VS LEV R V
Sbjct: 1 MIGYLYVLAAACLWGLLGVVSRWAFEQGVSPLEVAFWRAALGAVLFGSQAVLIQKVRLE- 59
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
A +L F +++ +G + A+ + L + + P I L +FL+E
Sbjct: 60 -----RADAGAVLGFGLVGISLFYGSYQLAIGSGGAALAAVLLYTAPAIVALLSWLFLRE 114
Query: 142 RLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++ ++ A L +L + +++L G+ + A+ + G
Sbjct: 115 PMDAHKVGAVGLTLLGVALVSLQGGGVRVTPAAVFWGLLSALTYATHYLFGKLYLNKYST 174
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + AL T F ++ G++R + +
Sbjct: 175 PTVFLYALPVGALGLLPFVHFAPKNAEAWTAIAFLTVASTFFAVTLYFAGLRRLEATRAS 234
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ P++ +++ + + + G+V+ +V +L
Sbjct: 235 VVATIEPVVAALTAWLWWGERFSLLGYLGAGLVLAGVVWMVLR 277
Score = 37.6 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 30/70 (42%)
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ S + + I + ++ YTAP ++ + S L++P+D + G+ +
Sbjct: 69 FGLVGISLFYGSYQLAIGSGGAALAAVLLYTAPAIVALLSWLFLREPMDAHKVGAVGLTL 128
Query: 295 IAMVVYLLPT 304
+ + + L
Sbjct: 129 LGVALVSLQG 138
>gi|163737201|ref|ZP_02144619.1| hypothetical protein RGBS107_03623 [Phaeobacter gallaeciensis
BS107]
gi|161389805|gb|EDQ14156.1| hypothetical protein RGBS107_03623 [Phaeobacter gallaeciensis
BS107]
Length = 318
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 93/277 (33%), Gaps = 7/277 (2%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y ++ + + L VS ++++ L S P + +V P
Sbjct: 13 YAIFSTHDVVVKILGADVSPVQLVFFSSLLSFPLLVLMLV------KDATPGHLRPVHPW 66
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + +AV YA T F TP++ L L ER+ ++ A +
Sbjct: 67 WMAARSATMAVIPASAFYAFSELPLAETYALLFATPLLITLLSIPILGERVGLPRLAAVV 126
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ + ++++ A ++++C A +++ + + ++ P L
Sbjct: 127 VGFIGVMVVLRPGATSFGLGHAAALFASFCAAFQSVVLRKISADERRVVLMIYPMLMTFA 186
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
G + + + L + + + V M+Y+ + +
Sbjct: 187 VMGLALPLVYVPLEGVTFSGIAIVALFGFCATLLTVSAYTIGEAAIVAPMQYSQIIWATI 246
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
SV + + +D + + I++ + + +L
Sbjct: 247 FSVVLFNEKVDLMTLVGAAIIIASGIFIVLREAFGGR 283
>gi|134281240|ref|ZP_01767949.1| putative membrane protein [Burkholderia pseudomallei 305]
gi|134247546|gb|EBA47631.1| putative membrane protein [Burkholderia pseudomallei 305]
Length = 356
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + + +G ++ ++ VL ++ R + +
Sbjct: 7 SSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 RWP------RGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 121 WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFS 248
V I + + P + + F
Sbjct: 181 DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAG 296
Score = 43.4 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|126438901|ref|YP_001058223.1| hypothetical protein BURPS668_1174 [Burkholderia pseudomallei 668]
gi|126218394|gb|ABN81900.1| putative membrane protein [Burkholderia pseudomallei 668]
Length = 353
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + + +G ++ ++ VL ++ R + +
Sbjct: 7 SSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 RWP------RGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 121 WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFS 248
V I + + P + + F
Sbjct: 181 DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAG 296
Score = 43.4 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|186682139|ref|YP_001865335.1| hypothetical protein Npun_R1723 [Nostoc punctiforme PCC 73102]
gi|186464591|gb|ACC80392.1| protein of unknown function DUF6, transmembrane [Nostoc punctiforme
PCC 73102]
Length = 779
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/355 (11%), Positives = 103/355 (29%), Gaps = 48/355 (13%)
Query: 2 GKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ------------ 49
A E S + L G L + + ++ + + + +
Sbjct: 421 QPPAKPSESRSRNSSGFSQLQV--GFLLIVSSAVISSLYNIAIKVIFHEGSQIFGVVDVE 478
Query: 50 --VSV-----LEVISHRVLWSLPGVFFAIVYFSGGLSL-------------LKDTLKNPK 89
+ L +++ R + +P + L +
Sbjct: 479 RLLPPTLGNTLLILTLRFMVVVPLMVLLSPMLHPTLWQDLENLAASVRGNPTAANTATKR 538
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ + V S L + A+ + +F+ P++S L ++R +
Sbjct: 539 ILLLSVVSGCFLFLSQVLIYIAIAQVTTGMAIALFFIYPMVSGLLSWFLFRDRPTTFRFG 598
Query: 150 AALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
A I L++ G L +A + I
Sbjct: 599 AIAAICCGELLVLGGSPNNSIGNPSLGGSTALLSGVAFAAYIILTRVCASKLHPVTFTLI 658
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV---FCIFSYGIKRAK 255
+ + + ++ S + ++ +L + + + GI +
Sbjct: 659 NFATMLLLSFVCLMLPLPSNWNLIVFDSSKMLELVLSAFILGVLTLAGYLLNNVGISKLG 718
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S I+ + P+L ++ + I+++ ++ V+ + +V + L T+ N K
Sbjct: 719 ASRSAIIGGSIPVLTVIFAGLIIQENLEIVQILGVLLVTFGAAAFSLETMRNQAK 773
>gi|163740388|ref|ZP_02147782.1| Putative transporter, RhaT family, DMT superfamily protein
[Phaeobacter gallaeciensis 2.10]
gi|161386246|gb|EDQ10621.1| Putative transporter, RhaT family, DMT superfamily protein
[Phaeobacter gallaeciensis 2.10]
Length = 318
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 93/277 (33%), Gaps = 7/277 (2%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y ++ + + L VS ++++ L S P + +V P
Sbjct: 13 YAIFSTHDVVVKILGADVSPVQLVFFSSLLSFPLLVLMLV------KDATPGHLRPVHPW 66
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + +AV YA T F TP++ L L ER+ ++ A +
Sbjct: 67 WMAARSATMAVIPASAFYAFSELPLAETYALLFATPLLITLLSIPILGERVGLPRLAAVV 126
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ + ++++ A ++++C A +++ + + ++ P L
Sbjct: 127 VGFIGVMVVLRPGATSFGLGHAAALFASFCAAFQSVVLRKISADERRVVLMIYPMLMTFA 186
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
G + + + L + + + V M+Y+ + +
Sbjct: 187 VMGLALPLVYVPLEGVTFGGIAIVALFGFCATLLTVSAYTIGEAAIVAPMQYSQIIWATI 246
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
SV + + +D + + I++ + + +L
Sbjct: 247 FSVVLFNEKVDLMTLVGAAIIIASGIFIVLREAFGGR 283
>gi|325920060|ref|ZP_08182033.1| putative membrane protein [Xanthomonas gardneri ATCC 19865]
gi|325549458|gb|EGD20339.1| putative membrane protein [Xanthomonas gardneri ATCC 19865]
Length = 289
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 93/282 (32%), Gaps = 8/282 (2%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + + +G+ + + +S E+ R + L + IV L + +
Sbjct: 1 MLTSTVAFGLMAIAIRLASRNISTTEIAFFRNAFGLLALLPLIVRPGKPLPRTRQLPQYL 60
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ +A+ + TP+ L V+L E++ +
Sbjct: 61 ARTSI-------GLASMLCGFWAIGHLPLSQAISLSYSTPLFVTVLAVVWLHEQVRMRRW 113
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A + +L++ + +A A I + V+ +
Sbjct: 114 LAVAAGFIGVLVILRPGSSTFTPGLLVALLAAVISAIVAIQIKQLSRNDDSDTVVFYTYV 173
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F+V + + D L+L+ G+ + ++ +K ++S + + +
Sbjct: 174 FWVPMSLIPALFQWTWPQGIDWLWLVATGIFGTAGQLFWTRALKLGEVSALQPISFMQLP 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L+ + ++ + I+ I I++ A V + + +
Sbjct: 234 LVALLGWWLFGEAIERHTLIGAAIIIGANVYIAHRESVLARR 275
>gi|139438690|ref|ZP_01772174.1| Hypothetical protein COLAER_01175 [Collinsella aerofaciens ATCC
25986]
gi|133775770|gb|EBA39590.1| Hypothetical protein COLAER_01175 [Collinsella aerofaciens ATCC
25986]
Length = 340
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 95/296 (32%), Gaps = 11/296 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
++ + G L WG + FL V L ++S R + + +F A+V
Sbjct: 46 NSASTRKMITGVLATLVGGSFWGFSGTSASFLFDTYHVDTLWLMSIRQILAGL-LFMAVV 104
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L+K +L+F+A L + ++ A+ + + VI +
Sbjct: 105 VTRDRERLIKLWTTPADRKQLLLFTAFGLLFNQFCYLSAVRLTNAGTATVLQCLQLVIIM 164
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFAR 185
V + ++I L + ++ L+++ + SA C A
Sbjct: 165 GYACVTDRRMPRTREVIGIGLALGGTFLIATGGDPTSLNISPLGLAAGLMCAVSAACMAV 224
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ G I + A L + + + F +
Sbjct: 225 IPAKILPEYGSPIVTGSAMLTAGVVSCVFEQPWAHMPALDAAGIEALAVFVVIGSFFAYM 284
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ G+K ++ P+ ++S +L I F ++++ M + +
Sbjct: 285 LYMQGVKDIGSVRASLIGTVEPVSATITSAVMLGTVFLPTDLIGFVMIIVMMFLTV 340
>gi|329934772|ref|ZP_08284813.1| permease of the drug/metabolite transporter (DMT) superfamily
[Streptomyces griseoaurantiacus M045]
gi|329305594|gb|EGG49450.1| permease of the drug/metabolite transporter (DMT) superfamily
[Streptomyces griseoaurantiacus M045]
Length = 351
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 87/279 (31%), Gaps = 13/279 (4%)
Query: 35 ILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
+ W + T+ L+ + L + + R + + I + +
Sbjct: 30 LFWSSSYAVTKRALDDIGPLTIGALRFSLAALLLGLVI----RMNRKRPARPDTRQRRQL 85
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
V + V++ + S P++++ L V L+ R+ ++ LL
Sbjct: 86 YVSGFLGITVYFILENVGVDMSTASDASLIVATYPLMTMLLELVALRARMPWTRVTGVLL 145
Query: 154 IILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +++ + L + A +
Sbjct: 146 ATVGAVLVVRSGAETGGDSRWVGDILLLLGGLAWAGYNVLGKRASAGQNAMSVTYYQTLA 205
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A +++ + G+ L + + F +++YG++R S +
Sbjct: 206 GAAGFLLASLLEAGDWRVPDATASALVVYLAVACSVGGFLLYNYGLRRMASSVAVNILNL 265
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P+ + +V I + I V+ ++V+ + + +L
Sbjct: 266 VPVFGVAGAVIINDESIRLVQAAGGVVIVLGVALGMLER 304
>gi|218129249|ref|ZP_03458053.1| hypothetical protein BACEGG_00826 [Bacteroides eggerthii DSM 20697]
gi|217988627|gb|EEC54947.1| hypothetical protein BACEGG_00826 [Bacteroides eggerthii DSM 20697]
Length = 337
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 103/306 (33%), Gaps = 18/306 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
L + + G LF A ILWG+ + L + S L V + R++ + + +
Sbjct: 29 LKRNTDMNKNIQGHLFALTANILWGLMAPIGKSALAEFSALSVTTFRMVGAAACFWLLSL 88
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ +D LK + + L + G +I+ L S P++++
Sbjct: 89 FCKREQVDHRDMLK------IFFATLFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTM 142
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAY 181
+ +++LKE + + +++ + + LI+ ++S G L +A
Sbjct: 143 IVAAIYLKEPVTNKKVLGIFVGAMGALILIMNSQNTGSGGGSVIGDLLCLIAQISFSIYL 202
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ S M V A ++G + + + +
Sbjct: 203 TVFKGLSQKYSPITLNKWMFVYASMCYIPFSYHGIAAIQWAEVSTAALVQVGYVVVGGSF 262
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + + + V + Y P++ + +V I + + I +V + + +
Sbjct: 263 LAYICIMTAQRLLRPTVVSMYNYMQPIVASIVTVVIGMATFNLEKGIAIALVFLGVYIVT 322
Query: 302 LPTVIN 307
Sbjct: 323 QSKSRK 328
>gi|182626599|ref|ZP_02954345.1| putative membrane protein [Clostridium perfringens D str. JGS1721]
gi|177908079|gb|EDT70652.1| putative membrane protein [Clostridium perfringens D str. JGS1721]
Length = 287
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 94/292 (32%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + + +E R L S F+ +
Sbjct: 2 NNKTKGIILITISALSFALMSTFVKLSGDLPSIEKSFFRNLVSCFVAFYLV------KKD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L+ + + + YA+ + ++P + +FLK
Sbjct: 56 NALLFGHKENRLALIGRSALGTLGIWANYYAIDRLILSDATILNKLSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L + II L +L + SG AI SA V G
Sbjct: 116 EKLKPIHIICLLAAFSGVLFIVRPSGNLASNFIPAIIGLCSAAFAGGAYTFVRYLGGKEK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F +V F ++ +FLI G+ S + K A
Sbjct: 176 GATIVFFFSFFSIVTTFPIMLFQFETFSLEQFVFLILAGVAASCAQFALTAAYKYAPARD 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +YT + + + D + I + ++++A L + K
Sbjct: 236 ISIYDYTQVIFTALIGFVLFGDIPDKISLIGYALILLASFSIFLYNKKEASK 287
>gi|254440512|ref|ZP_05054006.1| UAA transporter family [Octadecabacter antarcticus 307]
gi|198255958|gb|EDY80272.1| UAA transporter family [Octadecabacter antarcticus 307]
Length = 309
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 94/290 (32%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G + A ++ + + + ++V E + R + ++P + +V
Sbjct: 2 TTSIQSNVTRGIFLMMSAITVFTVMSAFIKAADRVPAGEAMFFRSIMAMPIILIWLVTHG 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + ++ AV +V S + G L + + + LG
Sbjct: 62 GIRAGIRTKSVRNHAVRGIVGSCAMGLGFAGLKYLPLPEVTAIRFVSPILMVVLAAFILG 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
F R+ + + ++I+ M++ G SA A + V G
Sbjct: 122 ERFRFVRIAAVMLGFIGVVIIVAPRMSVGLGSNEALGVGLTLGSACLAALAQVFVKGMSG 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + V + + + N + L+G G++ + + + A+
Sbjct: 182 RESTTAIVFWFSATATVLSLLTLPFGWVWPNGYELALLVGAGVIGGLGQILLTASYRFAE 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y A L ++ F + I V+ A V+ +L
Sbjct: 242 AGVLAPFTYIAMLWSLLIGYFWFDEVPTMAMLIGAAFVISAGVIIVLRER 291
>gi|321314164|ref|YP_004206451.1| hypothetical protein BSn5_14080 [Bacillus subtilis BSn5]
gi|320020438|gb|ADV95424.1| hypothetical protein BSn5_14080 [Bacillus subtilis BSn5]
Length = 294
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 96/294 (32%), Gaps = 13/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G++++ A +WG + + + + E++ R + ++ + +
Sbjct: 2 KNTLLGSIYLALAASIWGGMYVVVKVVVAVIPPFELVWIRYVIAILALLIVGLIRKQSWK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + ++ + Y + + + TP V + L
Sbjct: 62 IHK-----RDLLLIVAIGIVGNTISIVTQEYGTMLSSAQMGAIITSSTPAFMVIFARLLL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGS 192
KE LN + + +L +L + + I + A+TW+ K +P
Sbjct: 117 KEPLNIKKGTSIILATTGVLFIVGNGHIDTSNQLGGISLLVAALTWALMSVLIKRVPNSY 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S + L L + + F +++ G++
Sbjct: 177 SPILVTTYSTFVAIVALTPFVKPSTIFTPLLLEPKILGGLLYLGIVSTACAFLLWNRGLQ 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S+ G+ + PL+ + +L + I I +++ +++ +
Sbjct: 237 LLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFLILSGVLLVIKEKEK 290
>gi|237748398|ref|ZP_04578878.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379760|gb|EEO29851.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 303
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 100/304 (32%), Gaps = 17/304 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L A +LW T + + +S +E+ R L++ +
Sbjct: 4 STSAKGYLLALSATVLWSTTFPLARLIAFSMSPVELAFWRWLFTFSCMLPFGFVAVKNNR 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+L +++ A T S PV F FL
Sbjct: 64 ----PALKKNWKWILAAGVLGFSMYSILMFEAGRTTDATNMSLIAATAPVFMAFFAIAFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKT 187
ERL+ QI+ ++ ++ +L++ L G + LA ++ RK
Sbjct: 120 HERLSFPQILGLVIAVIGVLVLVLKGEFHRFSDLSFTIGDLWMLLAASLFAVYSILVRKR 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ M AL ++ + F + + + ++
Sbjct: 180 PGTMPQKALMTAMLAFGFFALCPLMAAEAMATDWHFPDGQTLWIIFYIAVIPTLIGYLLW 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ + GI+ Y+ PL + +V +L + + + + +++ +++ L +
Sbjct: 240 NRSVEYIGAARAGIVYYSIPLFSSLEAVILLHETVSMPQIVGGLMIIGGILLSSLNVLRQ 299
Query: 308 SGKN 311
++
Sbjct: 300 LIRH 303
>gi|254563583|ref|YP_003070678.1| RarD-like membrane protein, chloramphenicol resistance permease
[Methylobacterium extorquens DM4]
gi|254270861|emb|CAX26866.1| putative RarD-like membrane protein, putative chloramphenicol
resistance permease [Methylobacterium extorquens DM4]
Length = 294
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 8/291 (2%)
Query: 25 MGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG ++ AY+ WG+ P++ + L+ + +++ R+ WS V I L+
Sbjct: 1 MGLIYALAAYLSWGLVVPVHFRLLDGIPPGTILAQRIAWSALLVVGLIALLRKRLANPFP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
G+LV SA ++A++W ++ A+ + S YF+ P++SV LG++ L ERL
Sbjct: 61 L---RPRHGLLVVSAGLIAINWMLYLVAVSSGHMLDASLGYFINPLVSVALGALVLGERL 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q++A +++L ++I +G + A FA +
Sbjct: 118 RPVQVVAVAIVVLGVVIAVAMAGRL----PLLSLGLAVTFALYGLVRKLVAVDGTVGFCA 173
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + L G+ + F+ R L+T+G+M+
Sbjct: 174 ETFLLLPAALAYLAFVAPPVPDDARTWALLALTGVTTALPLIWFAAAATRLTLATLGLMQ 233
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y AP ++ S + + + R ++FG++ +A+++Y + + + +
Sbjct: 234 YIAPSCLMGLSTLVYGETLTPDRLVLFGLIWLALMLYAYDAIRHERRRRAA 284
>gi|226948434|ref|YP_002803525.1| UAA transporter family [Clostridium botulinum A2 str. Kyoto]
gi|226841122|gb|ACO83788.1| UAA transporter family [Clostridium botulinum A2 str. Kyoto]
Length = 293
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + +FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAVLCWASYGVFSKKVMPRYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 MTLTFYSFLFCTLFLIPFVIYEKPLSLINEVPYYSYISILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ IV S IL + I + + +++ + +
Sbjct: 243 IGPSKTSIFVNLVPIFSIVLSSIILGEKITIITLLSTALIIAGVYI 288
Score = 39.5 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 39/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + L
Sbjct: 4 SRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|315918053|ref|ZP_07914293.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691928|gb|EFS28763.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 280
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 98/280 (35%), Gaps = 7/280 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + + + + + + + ++S+ E + R S F ++ + +
Sbjct: 1 MLISALGFTMMSVAVKAIPEISLFEKVFFRNSISCFVAFLLLL------RDRRGFYVKKE 54
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ + + + YA+ ++ ++P+ F ++LKE+++ QI+
Sbjct: 55 NRLPVFIRSFLGFLGIVTNFYAIQYLLLADSNMLGKLSPITVSFFAVLYLKEKVDKEQIL 114
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ L + S + ++A S + ++ +L
Sbjct: 115 GIAFSFIGALFVIKPSFSLSMLPSLAGLTSVTFAGISYTVIRYLNDKENPNIIVFYFSLM 174
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
V+ + F + N+ +L+ GL+ +Y K A+ S V + Y+
Sbjct: 175 SVLCSIPFMLTDFQVPNLRQWFYLLSIGLMACLAQFFMTYSYKNAEASEVAVYNYSGIPY 234
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINS 308
I+ + + D I I++ A+ +YL +
Sbjct: 235 GIILGYLLFDEIPDIYSCIGGVIIIAMAIYLYLHNKKKKA 274
>gi|91976689|ref|YP_569348.1| hypothetical protein RPD_2212 [Rhodopseudomonas palustris BisB5]
gi|91683145|gb|ABE39447.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisB5]
Length = 315
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/304 (16%), Positives = 103/304 (33%), Gaps = 9/304 (2%)
Query: 9 EYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGV 67
+ ++ L++ +A P + G + + + + ++L + +E+ R L L +
Sbjct: 10 DAARRLTQRHADHP-LRGIALIVASTVFLACSDTLAKYLGRTLPPIEIGWIRFLVFLLIM 68
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+ S ++ + V A L FI L S + FV
Sbjct: 69 LPVALASS-------ESPLRSVRPKLQVLRALALVASSVLFITGLRFLPIAEASATSFVA 121
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
P+ L V L E + + +A L+ ++ +LI+ I SA C+A
Sbjct: 122 PLFVTALSIVLLGEAIGIRRWVATLVGLIGVLIVIRPGSSTFNPAVILPILSALCWAITL 181
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I G + + AL + + + D +G GL ++ I
Sbjct: 182 ILTRMISGADRAVVTMTFSALVGFLALSAMVPFVWVTPSWTDIAIGVGVGLASTIGQWIV 241
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ A S + Y+ L + + + + D + +++ + V +
Sbjct: 242 VLAFRYADASALAPFSYSQLLWVTILGYAVFSEIPDAWTFVGAVVIICSGVYIAHRERLR 301
Query: 308 SGKN 311
+N
Sbjct: 302 RKQN 305
>gi|227821365|ref|YP_002825335.1| hypothetical protein NGR_c07890 [Sinorhizobium fredii NGR234]
gi|227340364|gb|ACP24582.1| hypothetical protein NGR_c07890 [Sinorhizobium fredii NGR234]
Length = 345
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 105/311 (33%), Gaps = 15/311 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
S + M G L + +++ + ++ ++ +R +++ + +
Sbjct: 33 SMDADIHNPMKGILLKVLSVLVFVCMATCIKAAGSDIATGQITFYRSAFAMVPILGFLAC 92
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ V V + + Y L+ + P+++V
Sbjct: 93 RGQLRDAFRTN-----NVAGHVARGFVGILSMSCGFYGLVHLPLPEAIAIGYAMPLLAVA 147
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFA 184
++FL E + + A ++ ++ +LI+T G S A+AV SA A
Sbjct: 148 FAALFLGEIVRLYRWSAVIIGLVGVLIITWPRVTLFDEGGLGSSEASGAVAVLLSATLGA 207
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ V ++ +L V++ + + + L L+ G
Sbjct: 208 VAMVLVRRLVQTERTHTIVLYFSLSAAVFSLATLPFGWSAMSWTSFLLLMLAGFCGGVAQ 267
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + A +ST+ EYT+ +L IV F+ + IVV A + +
Sbjct: 268 ILLTESYRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTAAMLLGTAIVVGAGIFIIFRE 327
Query: 305 VINSGKNKTKK 315
+ K +
Sbjct: 328 HRLGLERKGAR 338
>gi|169346823|ref|ZP_02865773.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
gi|169297043|gb|EDS79166.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
Length = 287
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 93/292 (31%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + + +E R L S F+ +
Sbjct: 2 NNKTKGIILITISALSFALMSTFVKLSGDLPSIEKSFFRNLVSCFVAFYLV------KKD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L+ + + + YA+ + ++P + +FLK
Sbjct: 56 NALLFGHKENRLALIGRSALGTLGIWANYYAIDRLILSDATILNKLSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L + II L +L + SG AI SA V G
Sbjct: 116 EKLKPIHIICLLAAFSGVLFIVRPSGNLASNFIPAIIGLCSAAFAGGAYTFVRYLGGKEK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F +V F ++ FLI G+ S + K A
Sbjct: 176 GATIVFFFSFFSIVTTFPIMLFQFETFSLEQFAFLILAGVAASCAQFALTAAYKYAPARD 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +YT + + + D + I + ++++A L + K
Sbjct: 236 ISIYDYTQVIFTALIGFVLFGDIPDKISLIGYALILLASFSIFLYNKKEASK 287
>gi|154508271|ref|ZP_02043913.1| hypothetical protein ACTODO_00767 [Actinomyces odontolyticus ATCC
17982]
gi|153797905|gb|EDN80325.1| hypothetical protein ACTODO_00767 [Actinomyces odontolyticus ATCC
17982]
Length = 316
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 62/308 (20%), Positives = 129/308 (41%), Gaps = 13/308 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ Y++WG PLY L +EVI HR +W L + +G
Sbjct: 2 STQKNEPRALALGVSCYVIWGFFPLYFSLLSPAGAVEVIVHRAVWGL-FFCVVALAVTGS 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++ + + A+ L + ++ ++W ++YA+L + YF+ P++++ LG +
Sbjct: 61 LGKIRALIADRGALWRLAVAGGLVVINWSVYVYAVLAGHTTDAAVGYFINPLVTIALGLI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSE 194
L E + +Q +A L +++++I+ + + A+ + V
Sbjct: 121 VLHEHVTPIQKVALALGVVAVVILVIGQRSVPIVSLTLALTFGLYSLVKKDVAARVDPLA 180
Query: 195 GFFIEMCVLAIPALFYV---------VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
G IE ++ L Y ++ + + + + L+G G L
Sbjct: 181 GMAIETAAVSPILLGYYAYLAATSSTSFHTIASSDSSEVSWVIHLALLLGAGALTMIPLI 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+F+ + L T+G ++Y P L ++ +VFI + + T R I G+V +A+ +
Sbjct: 241 MFASAARGLTLGTMGFLQYLGPTLQLLVAVFIFHETVPTFRWIAMGVVWVALSCLSADWL 300
Query: 306 INSGKNKT 313
++S + K
Sbjct: 301 LSSVRAKR 308
>gi|317419392|emb|CBN81429.1| Transmembrane protein 20 [Dicentrarchus labrax]
Length = 416
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 86/304 (28%), Gaps = 22/304 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + F + + + I L + ++ V +E+ + R + + V ++Y G +D
Sbjct: 119 IGLFYAFLSTVFFSIIALLVKSIQGVHAIEISAIRCFFQMLFVMPLLIYHKTGFLGPRDK 178
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
I + YA+ + F PV++ L VFLKER
Sbjct: 179 RIYLVLR------GFIGSNAMILLFYAVQQMPLADATVIMFSNPVLTSLLAWVFLKERCT 232
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM---- 200
+ + + ++++ I + A + G
Sbjct: 233 IWDCVFTVFTLTGVILIARPPFIFGEDVRGIEGNYANHIKGTIAAFAGALGAAFTFVVLR 292
Query: 201 ------------CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
A+ + GE D L+ +L +
Sbjct: 293 KIGKSVHYYLSVWYYAVIGFIECIITVSVLGEWKIPFCGRDRWMLMLIAVLGIAGQTFLT 352
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K V +M +L + + VV + L + +
Sbjct: 353 KALQIEKAGPVALMRTVDVVLAFIFQFIFFNRAPTLWSLGGALCVVASTSGVALRKLYTN 412
Query: 309 GKNK 312
+ +
Sbjct: 413 SRKR 416
>gi|307324546|ref|ZP_07603753.1| protein of unknown function DUF6 transmembrane [Streptomyces
violaceusniger Tu 4113]
gi|306889790|gb|EFN20769.1| protein of unknown function DUF6 transmembrane [Streptomyces
violaceusniger Tu 4113]
Length = 486
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 85/287 (29%), Gaps = 22/287 (7%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LWG+ + + L+ L + R L + F +
Sbjct: 6 IALAVLVTALWGVNFVVIEVGLDHFPPLLFCALRFLVAALPAVFLV-----------GPP 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + V A +A FI L+S + V + +V L ER
Sbjct: 55 KVAWRWILGVGLALGVAKFGLLFIGMHEGMPAGLSSLVLQIQAVFTALFAAVVLGERPGR 114
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+++ + + + + + G + + +A F + + + +
Sbjct: 115 RRLLGMAVALAGIAVAAVDEGTSGPLIGFVLVVAAAAFWGVSNVLTRKAAPPDALNFMVW 174
Query: 206 PALFYVVWNGFSGGEHF----------FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L V+ L + + F F ++ ++
Sbjct: 175 VSLVPVLPLLGLSLMFEGARPDLDALSRLDWAGVGAIVYVAWVTTVFGFGVWGLLLRTYD 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
STV P+ + S+ L + I T R + ++V + + L
Sbjct: 235 ASTVAPFSLLVPVFGMSSAALALGEGISTPRWLAAALLVGGVALTSL 281
>gi|163859223|ref|YP_001633521.1| hypothetical protein Bpet4902 [Bordetella petrii DSM 12804]
gi|163262951|emb|CAP45254.1| putative Membrane protein [Bordetella petrii]
Length = 300
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 84/292 (28%), Gaps = 7/292 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V + + +++ S ++++ R +LP V G +L
Sbjct: 4 RPLAGIACVSVGVLFLTFSDALAKWVSQHYSPIQILFLRAAIALPFVLALAAALGGRAAL 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + FF L F P+ L + LK
Sbjct: 64 RTRHPG------LHLLRGALNVISACFFYLGLQALPLAEGIAIVFAAPLFVTALSVLALK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ + +A +L++ A+ +A +A + + +
Sbjct: 118 ERVDGARWLAVAAGFAGVLVIVRPGAASFQVEALYPLATAVLYAAMMLTARAIGRAESML 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ V + + + P G L ++ + G + S V
Sbjct: 178 TTTVYIVVGQFVCSAVAVPAFWTPLQWPHLPHFAGIALFSTLGLTFITQGFRIGPASVVA 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+Y A L + + D + ++V V + +
Sbjct: 238 PFDYGALLWASLLGWLVWHDAPDLYDCVGAALIVGGGVYIAWRESRTARARR 289
>gi|104782914|ref|YP_609412.1| hypothetical protein PSEEN3918 [Pseudomonas entomophila L48]
gi|95111901|emb|CAK16625.1| conserved hypothetical protein; putative membrane protein
[Pseudomonas entomophila L48]
Length = 296
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/295 (10%), Positives = 89/295 (30%), Gaps = 8/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + + +G+T ++ + S ++ R +++ +
Sbjct: 1 MNHRTALGALHIGALFFGLTGVFGKLAASASPAIIVFGRAAFAVLALGLFASLARQAWQP 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK + +LA HW F A+ + + + P +V L + +
Sbjct: 61 LKGRDLRRLVL-----GGVLLAGHWVSFFIAVKVGGVAIATLGFASFPAFTVILEGLLFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---FF 197
ER+ + + LL+ + L+++T + + + + + + G
Sbjct: 116 ERIRRNEALLVLLVSIGLVLVTPAFDLASEATGGLLWALLSGLLFSLLSLTNRAGSGRLP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + + + + + +F + K
Sbjct: 176 AVQAALWQNLVVTLCLLPVAAPGLAAVAPMDWLWIALLGIFCTGVAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T ++ P+ I + + + +++ A+V+ + K +
Sbjct: 236 TAAVVFGMEPVYGIAVAWAVFAETPTPSMLAGGALIIFAIVLSSRLSAEQPAKQR 290
>gi|240141070|ref|YP_002965550.1| putative RarD-like membrane protein, putative chloramphenicol
resistance permease [Methylobacterium extorquens AM1]
gi|240011047|gb|ACS42273.1| putative RarD-like membrane protein, putative chloramphenicol
resistance permease [Methylobacterium extorquens AM1]
Length = 294
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 124/291 (42%), Gaps = 8/291 (2%)
Query: 25 MGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG ++ AY+ WG+ P++ + L+ + +++ R+ WS V I L+
Sbjct: 1 MGLIYALAAYLSWGLVVPVHFRLLDGIPPGTILAQRIAWSALLVVGLIALLRKRLANPFP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
G LV SA ++A++W ++ A+ + S YF+ P++SV LG++ L ERL
Sbjct: 61 L---RPRHGGLVVSAGLIAINWMLYLVAVSSGHMLDASLGYFINPLVSVALGALVLGERL 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q++A +++L ++I +G + A FA +
Sbjct: 118 RPVQVVAVAIVVLGVVIAVAMAGRL----PLLSLGLAVTFALYGLVRKLVAVDGTVGFCA 173
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + L G+ + F+ R L+T+G+M+
Sbjct: 174 ETFLLLPAALAYLAFVAPPVPDDARTWALLALTGVTTALPLIWFAAAATRLTLATLGLMQ 233
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y AP ++ S + + + R ++FG++ +A+++Y + + + +
Sbjct: 234 YIAPSCLMGLSTLVYGETLTPDRLVLFGLIWLALMLYAYDAIRHERRRRAA 284
>gi|153938714|ref|YP_001390514.1| hypothetical protein CLI_1248 [Clostridium botulinum F str.
Langeland]
gi|152934610|gb|ABS40108.1| putative membrane protein [Clostridium botulinum F str. Langeland]
gi|295318595|gb|ADF98972.1| putative membrane protein [Clostridium botulinum F str. 230613]
Length = 293
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + +FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAVLCWASYGVFSKKVMPRYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 MTLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYISILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ IV S IL + I + + +++ + +
Sbjct: 243 IGPSKTSIFVNLVPIFSIVLSSIILGEKITIITLLSTALIIAGVYI 288
Score = 39.1 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 39/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + L
Sbjct: 4 SRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|291561221|emb|CBL40020.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[butyrate-producing bacterium SS3/4]
Length = 289
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/289 (18%), Positives = 103/289 (35%), Gaps = 7/289 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G LF+ + + + + + ++ +E I R L+ L FF I
Sbjct: 4 TQKQKGILFMILSALSFASMQVVVRMSREIPTMEQICVRNLFILIVSFFII------RKK 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K L + + YA + ++P+ L +VF+K
Sbjct: 58 RGSYYGPKKYQPYLFGRSFFGFLGLITLFYASSHAAQGDVTVLNKLSPIFVTLLAAVFMK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+L+ +QI A L ++ I+ S + SA +G +G +
Sbjct: 118 EKLSPIQIPALALSVIGAFIVFRPSFQSDPFPLVVALLSAITSGVAYTFLGYFKGKVDGI 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ + F V + +F + + + L+ L S +Y + A S +
Sbjct: 178 TVIMHFSTFSVFGSLPFVISNFVMPDPHQFMLLMLISLFGSLGQVFITYAYRFAPASEIS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV-VIAMVVYLLPTVINS 308
I Y+ L IV IL +P+ + + +V + +++VY+
Sbjct: 238 IYNYSGILFSIVLGAAILGEPVKSTSILGGALVAIASIMVYIYGNSKKQ 286
>gi|254475288|ref|ZP_05088674.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214029531|gb|EEB70366.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 322
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/304 (10%), Positives = 101/304 (33%), Gaps = 8/304 (2%)
Query: 8 KEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPG 66
+ ++ + +MG ++ + + ++L + E R L L
Sbjct: 15 DNSQTTTTPQSPASQPVMGVFWMLVTGLCFVAVTALVKYLGDRIPPAESAFLRYLLGLVF 74
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
+ + + + + + + + +A+ + ++
Sbjct: 75 LVPMLPALRRT-------QISKRLWQLFALRGFVHTLGVILWFFAMTQIPLAEVTAMNYL 127
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK 186
+P+ ++FL ER+ ++ A ++ ++ LI+ + IA+ ++A F
Sbjct: 128 SPIYVSIGAALFLGERMALRRVGAIVVALIGALIILRPGFREVEMGHIAMLFTALAFGAS 187
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ S+ G + V+A+ +++ ++ + N+ + L +
Sbjct: 188 YLLAKSTVGGTNPVVVVAMLSIWVTIFLAPFAISVWVTPNLWELAILFAVASFATAGHYT 247
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A ++ + + L + + +P+D +++ A+ +
Sbjct: 248 MTLAFAAAPVTVTQPVTFLQLLWATLLGALVFAEPVDIWVVAGGCLILAAVSFITWREAV 307
Query: 307 NSGK 310
+
Sbjct: 308 LKKR 311
>gi|323140470|ref|ZP_08075398.1| putative membrane protein [Phascolarctobacterium sp. YIT 12067]
gi|322415038|gb|EFY05829.1| putative membrane protein [Phascolarctobacterium sp. YIT 12067]
Length = 289
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
L++ A + WG+ L+ + L S +++++ R L + V ++
Sbjct: 2 KTKAYLYIISAAVCWGLIGLFVRTLAAQGFSSMQIVALRSLAAAICVTLPLL----QSGS 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ + L + A+ + + + PV + + +
Sbjct: 58 AALRIRLRDLWLFVGTGICSLVFFNYCYFNAMQQTSLAVAALLLYTAPVFVMLMSLLCFG 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-------SAYCFARKTIPVGSS 193
E + +A LL +T G L + + A V
Sbjct: 118 EAFTRTKALALLLTFSGCACVTGVFGSSLTLTLSGLLYGLGSGFGYALYSIFGKYAVRKY 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I + F + L L + +++ G+++
Sbjct: 178 SSLTITAYTFYLALAASWPLADFDYQRLAAINLQAIGSTLGLGLLCAVLPYLLYTKGLEQ 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ P + V + + V+ I G++ A+ V +
Sbjct: 238 IEAGQASILATIEPFVAAAVGVIFFAEALTPVKIIGMGLIFAAIAVLNIRK 288
>gi|320449881|ref|YP_004201977.1| permease, drug/metabolite transporter superfamily [Thermus
scotoductus SA-01]
gi|320150050|gb|ADW21428.1| permease, drug/metabolite transporter superfamily [Thermus
scotoductus SA-01]
Length = 286
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 85/289 (29%), Gaps = 13/289 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
F + W + LE +S ++ R L + + +
Sbjct: 4 KALAAAFLTILFWASAFAGIRAGLEGLSPGHLVLLRFLVASALLLLYARFQG------LR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + + V+ +Y LT S PV + L L ERL
Sbjct: 58 PPRREDLPRLFLLGFLGITVYHTALVYGELTVSAGAASLLIATGPVFTALLSYFLLGERL 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVGSSEGFF 197
+ ++ L + L + G + A ++ F +
Sbjct: 118 KPMGLLGFALAFMGSLFIAFGEGGGVSLSPGAFLILLSALSTSLYFVWQKPLFARYGSRE 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + L V+ G L + + ++Y + R S
Sbjct: 178 MTVYTMVLGTLPLFVFFPGLGEALLAAPRPALLSTLYLGIFPGALAYLTWTYALSRTPAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y +P+L I+ + L + + + + + +++ L V
Sbjct: 238 RLSSFLYLSPVLAILVAYLWLGEVPSPLSLVGGTLALAGVLLVNLKGVK 286
>gi|298507424|gb|ADI86147.1| membrane protein, putative [Geobacter sulfurreducens KN400]
Length = 302
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/306 (11%), Positives = 99/306 (32%), Gaps = 12/306 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ S P + L V + L+ + L L + ++R+L++ + A
Sbjct: 1 MTTTPQSRPIINPYLAVLVGVFAVSFSALFVR-LTTAPPLIIATYRLLFTFLLLAPATAA 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + S LA+H+ + +L + + PV V
Sbjct: 60 SR----FSGVRSMSRREIALSAASGVFLALHFVTWFTSLFYTSVASSVVIVTMQPVFVVV 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARK 186
+F +E++ L ++ ++ + +++ + + + +
Sbjct: 116 GAWLFFREKVPRLALLGGVVALCGSIVIGAGDFQLGMRAFVGDLLALAAAVFVSGYLLIG 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
G+ E +L V + S + LF + +
Sbjct: 176 RKLRGNVELSGYTFVTYGASSLVLVSASFLSRTPFHPYPPLDWLLFFALAAVCTVLGHTV 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F++ ++ + S V + P+ IV + L + + ++ + ++ +
Sbjct: 236 FNWVLRYVQASVVSVSILGEPIGAIVWASLFLGESPTLRQVAGGSLIFAGLYIFTRVSAR 295
Query: 307 NSGKNK 312
N+ +
Sbjct: 296 NTVGRR 301
>gi|168215135|ref|ZP_02640760.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
gi|170713460|gb|EDT25642.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
Length = 287
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 93/292 (31%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + + +E R L S F+ +
Sbjct: 2 NNKTKGIILITISALSFALMSTFVKLSGDLPSIEKSFFRNLVSCFVAFYLV------KKD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ + + + YA+ + ++P + +FLK
Sbjct: 56 NALLFGQKENRLSLIGRSALGTLGIWANYYAIDRLILSDATILNKLSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L + II L +L + SG AI SA V G
Sbjct: 116 EKLKPIHIICLLAAFSGVLFIVRPSGNLASNFIPAIIGLCSAAFAGGAYTFVRYLGGKEK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F +V F ++ +FLI G+ S + K A
Sbjct: 176 GATIVFFFSFFSIVTTFPIMLFQFETFSLEQFVFLILAGVAASCAQFALTAAYKYAPARD 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +YT + + + D + I + ++++A L + K
Sbjct: 236 ISIYDYTQVIFTALIGFVLFGDIPDKISLIGYALILLASFSIFLYNKKEASK 287
>gi|18310299|ref|NP_562233.1| hypothetical protein CPE1317 [Clostridium perfringens str. 13]
gi|18144979|dbj|BAB81023.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 287
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 93/292 (31%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + + +E R L S F+ +
Sbjct: 2 NNKTKGIILITISALSFALMSTFVKLSGDLPSIEKSFFRNLVSCFVAFYLV------KKD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L+ + + + YA+ + ++P + +FLK
Sbjct: 56 NALLFGHKENRLALIGRSALGTLGIWANYYAIDRLILSDATILNKLSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L + II L +L + SG AI SA V G
Sbjct: 116 EKLKPIHIICLLAAFSGVLFIVRPSGNLASNFIPAIIGLCSAAFAGGAYTFVRYLGGKEK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F +V F ++ FLI G+ S + K A
Sbjct: 176 GATIVFFFSFFSIVTTFPIMLFQFKTFSLEQFAFLILAGVAASCAQFALTAAYKYAPARD 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +YT + + + D + I + ++++A L + K
Sbjct: 236 ISIYDYTQVIFTALIGFVLFGDIPDKISLIGYALILLASFSIFLYNKKEASK 287
>gi|325662651|ref|ZP_08151251.1| hypothetical protein HMPREF0490_01991 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471148|gb|EGC74374.1| hypothetical protein HMPREF0490_01991 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 303
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 86/291 (29%), Gaps = 17/291 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++WGI ++ + L Q S +E+ R + F ++
Sbjct: 2 NKRSKGIALAVITAVMWGIMGIFVRDLSKYQFSNIEISFFRCALAGAAYFVFLLITKP-- 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +V+ A ++ + + A+ + + F++P+ LG
Sbjct: 60 --AALKINLKGIIICIVYGAVAYSISFVSYSVAVSRIPVGVATVLMFMSPIWVAILGRFM 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-----------LAIAVTWSAYCFARKT 187
E+L +II + ++ +++ G + I V
Sbjct: 118 FGEKLEKSKIITIFVCLIGTILVANLIGGGNIKLDAIGILAGVVNGIGVALQILLPKFFA 177
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
A+ LF + + +G L
Sbjct: 178 KDYDRDTLLVYGFLGAAVVLLFGMDFGAVAGHFAAAPVTNLLWDLFGIGILCTMVANVAC 237
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + +T I+ ++ + + + + ++ I I+V+ +
Sbjct: 238 VKSTQYVEATTTSILSALEVVVGTLVGFLVFHEHLTILQMIGAVIIVVGAI 288
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 44/126 (34%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
AV W + + I A+ Y V+ + + + ++
Sbjct: 15 AVMWGIMGIFVRDLSKYQFSNIEISFFRCALAGAAYFVFLLITKPAALKINLKGIIICIV 74
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ S F +S + R + ++ + +P+ + + F+ + ++ + I + +
Sbjct: 75 YGAVAYSISFVSYSVAVSRIPVGVATVLMFMSPIWVAILGRFMFGEKLEKSKIITIFVCL 134
Query: 295 IAMVVY 300
I ++
Sbjct: 135 IGTILV 140
>gi|21226190|ref|NP_632112.1| transporter [Methanosarcina mazei Go1]
gi|20904421|gb|AAM29784.1| Transporter [Methanosarcina mazei Go1]
Length = 291
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 91/290 (31%), Gaps = 16/290 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQV--SVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
L + + LWG ++ + L + S L++++ RV + + +++ L
Sbjct: 2 QKRAYLLIAVSGSLWGTIGIFVRELYGLGFSTLQIVTMRVFSAAVIMLLYLLFTKPELLK 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++ + + + + + + P L + +
Sbjct: 62 I----RFRDSLYFVGTGILSIVFFNLCYFITIRETSIAIAVTLLYTAPAFVAILSRIIFR 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIPV 190
E L+ ++ + L + +T + S +I A A + +
Sbjct: 118 ESLDAKKLFSLGLTLTGCAFVTGYLPELGNSPSITLPWLLTGLGAGFGYALYSIFGKVAL 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ I +L + F F T + + +++ G
Sbjct: 178 KKYDTVTITAYTFFFASLALLPLVSFETSGEAFSTGSFWTYLIGLGFFPTVLAYLLYTKG 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ + S I+ P++ + F ++ + + V+ +V+
Sbjct: 238 LEEVESSRAAIVATVEPVVATFAGFFFFREIVSGWQLAGILFVLAGVVLI 287
>gi|297587747|ref|ZP_06946391.1| integral membrane protein domain protein [Finegoldia magna ATCC
53516]
gi|297574436|gb|EFH93156.1| integral membrane protein domain protein [Finegoldia magna ATCC
53516]
Length = 302
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 107/303 (35%), Gaps = 14/303 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G +F + +++G TP+ + +V+ R + +P + ++ + L
Sbjct: 1 MRKAKGMMFAIISALIFGFTPIMVRETLSNGSNVIMTSFLRGFFVIPFLIISLKSRNVSL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K LK + + + + L + +F+ P I +F
Sbjct: 61 KVTKQELKKLLLMC-----SIGGCITMTMLYASYQYISVGLATSIHFIFPTIVTVYSVMF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVG 191
L E++ + I+ + I+ ++++ + G T+S Y +
Sbjct: 116 LNEKMTKYKFISLIASIIGVILLANNVGGSSNFPLGLFLAVASGCTYSFYLIYMDVSGLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + I + +++ +G L + + L++ F I
Sbjct: 176 YMDSVKVTFYNCMINSTMLLIYGLITGDFTLSLSKYAWIIAFVISILVSVFGTLFIQLAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
A +ST I P+ ++ + + + D R + ++ +++++ L T K
Sbjct: 236 VNAGVSTYTIFSTLEPITSVILGIVLFNETTDPRRLLGCFMIFLSVMILALSTRFQERKA 295
Query: 312 KTK 314
K +
Sbjct: 296 KGR 298
>gi|254452996|ref|ZP_05066433.1| membrane protein [Octadecabacter antarcticus 238]
gi|198267402|gb|EDY91672.1| membrane protein [Octadecabacter antarcticus 238]
Length = 309
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 95/286 (33%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G + A ++ + + + ++V E + R L ++P V +V G ++
Sbjct: 6 QNNVTRGIFLMMSAITVFTVMSAFIKAADRVPAGEAMFFRSLMAMPIVLIWLVSHGGIMA 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ AV +V S + G L + + ++ LG F
Sbjct: 66 GIRTKSVRNHAVRGIVGSCAMGLGFAGLKYLPLPEVTAIRFVSPILMVVLAAIILGEKFR 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
R+ + + ++I+ +++ G SA A + V G
Sbjct: 126 FVRIAAVMLGFVGVVIIVAPRLSVGLGTNEALGVGLTLGSACLAALAQVFVKGMSGSEST 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ + V + + + N + LIG G++ + + + A+ +
Sbjct: 186 TAIVFWFSATATVLSLLTLPFGWVWPNGFELALLIGAGVIGGLGQILLTASYRFAEAGVL 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y + L ++ F + I V+ A V+ +L
Sbjct: 246 APFTYISMLWSVLIGYFWFNEVPTMAMLIGAAFVIAAGVIIVLRER 291
>gi|27377922|ref|NP_769451.1| hypothetical protein blr2811 [Bradyrhizobium japonicum USDA 110]
gi|27351068|dbj|BAC48076.1| blr2811 [Bradyrhizobium japonicum USDA 110]
Length = 328
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/287 (16%), Positives = 95/287 (33%), Gaps = 7/287 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + + G + + ++L + +++ R + FA+++ L
Sbjct: 37 KGIALILLSTVFLGCSDITAKYLSTSLPSIQITWIR------FLTFALMFTPVMLPASPL 90
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +G+ V L FFI L S + FV P+ L VFL E++
Sbjct: 91 YAMRTQRLGLHVMRGAALLGSSLFFITGLRFLPIAEASATGFVAPLFVTALSIVFLGEKV 150
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A L ++ +LI+ A SA C+A I G + +
Sbjct: 151 GMRRWFATALGLIGVLIILRPGTSAFHLAAFFPVVSAACWAGTLILTRMMSGREAVITTM 210
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A +L + + + I G+ ++ I + S +
Sbjct: 211 AYSSLTGLAILTAMVPFVWVTPSWTAIALGIFIGVASTAGQWIVVLAYRYGDASVLAPFS 270
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
YT L + + FI + D + +V + + + +
Sbjct: 271 YTQLLWVSILGFFIFGEVPDVWTVVGAAFIVASGLYIAHRERVRRAQ 317
>gi|269797220|ref|YP_003311120.1| hypothetical protein Vpar_0152 [Veillonella parvula DSM 2008]
gi|269093849|gb|ACZ23840.1| protein of unknown function DUF6 transmembrane [Veillonella parvula
DSM 2008]
Length = 313
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/307 (10%), Positives = 90/307 (29%), Gaps = 11/307 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
G + WG++ QFLE ++V ++ R+L + + + Y
Sbjct: 1 MEEKQWKGMGLAIMGALFWGLSGTSVQFLESAKHINVEWLLEVRLLVAGI-LTIGLAYLR 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + +L+F +A+ + A+ + + +V P + +
Sbjct: 60 EGKRIFSIFKAPKDIGKLLIFGVLGIALAQYTYFRAIAISGVGVATVLQYVAPTMIIIYL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTI 188
+ ++ + ++ LL ++ + + + G+ + + S + + I
Sbjct: 120 FLRYFKKPSTPELFCILLALVGTICIVMQKGLDISSFNEKALFWGLVSAASICVYTLQPI 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G + V + ++ L F +
Sbjct: 180 ELLKTYGTTAIVGFAMFICGILSVIMFQQFDSEAIVDSMTLLGLFAIIILGTVVSFNAYM 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G++ I+ P+ + +L + ++ + +
Sbjct: 240 EGVRLIGAVQGSILSSLEPISAALFGWALLGNEFTVIGIFGMICILATVFIIAWDRQRTI 299
Query: 309 GKNKTKK 315
+ K
Sbjct: 300 KREVLAK 306
>gi|254449920|ref|ZP_05063357.1| integral membrane protein, putative [Octadecabacter antarcticus
238]
gi|198264326|gb|EDY88596.1| integral membrane protein, putative [Octadecabacter antarcticus
238]
Length = 320
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 87/285 (30%), Gaps = 7/285 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L A+ ++ ++ + L + S ++++ VL+S P ++
Sbjct: 2 SSNAKGALLALIAFGVFATHDVFVKTLGAIYSPIQIVFFSVLFSFPLATIMLM------R 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K P+ + YA T F P++ L L
Sbjct: 56 DSKPGNLLPRHPWWMALRTVASVATAVTAFYAFTVLPLAQTYAILFAAPLLITILAIPIL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A ++ + +L++ L A +A + +I V
Sbjct: 116 GEVVRLRRWLAVIVGLTGVLVVLRPGSTDLNWGHAAALTAAVGGSVASIVVRRIGADERP 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L P + V G + I + + + + +
Sbjct: 176 VVMLLYPMMANFVLMGIGLAFVYIPMPIEHLGLVALVAAFAWTAGRCIIAAYQSGEAAII 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
M+Y+ + V + +D + I++ + + +L
Sbjct: 236 APMQYSQIIWATVYGALFFDERVDNATILGASIIIASGMYIVLRE 280
>gi|168218186|ref|ZP_02643811.1| putative membrane protein [Clostridium perfringens NCTC 8239]
gi|182379798|gb|EDT77277.1| putative membrane protein [Clostridium perfringens NCTC 8239]
Length = 287
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 93/292 (31%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + + +E R L S F+ +
Sbjct: 2 NNKTKGIILITISALSFALMSTFVKLSGDLPSIEKSFFRNLVSCFVAFYLV------KKD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ + + + YA+ + ++P + +FLK
Sbjct: 56 NALLFGQKENRLALIGRSALGTLGIWANYYAIDRLILSDATILNKLSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L + II L +L + SG AI SA V G
Sbjct: 116 EKLKPIHIICLLAAFSGVLFIVRPSGNLASNFIPAIIGLCSAAFAGGAYTFVRYLGGKEK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F +V F ++ +FLI G+ S + K A
Sbjct: 176 GATIVFFFSFFSIVTTFPIMLFQFETFSLEQFVFLILAGVAASCAQFALTAAYKYAPARD 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +YT + + + D + I + ++++A L + K
Sbjct: 236 ISIYDYTQVIFTALIGFVLFGDIPDKISLIGYALILLASFSIFLYNKKEASK 287
>gi|163815661|ref|ZP_02207033.1| hypothetical protein COPEUT_01841 [Coprococcus eutactus ATCC 27759]
gi|158448966|gb|EDP25961.1| hypothetical protein COPEUT_01841 [Coprococcus eutactus ATCC 27759]
Length = 297
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 90/298 (30%), Gaps = 7/298 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+SK G LF+ A + + + + + ++ R + ++
Sbjct: 1 MSKNLVIKDKYKGILFIIMAGFFFSLMTFFVRISGDLPTMQKAFFRNAVAAVVAIAMLMR 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ KD+ A + + I YA+ + ++P ++
Sbjct: 61 TEEKFRIRKDSWPGLAARSICGTAGLI------CNFYAIDKLNIADANILNKLSPFFAII 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LKE+ N ++ + +L + + S A+ V
Sbjct: 115 ASYFVLKEKANRIEWASVILAFTGAVFVVKPSFHMDFLYAMVGVAGGLGAGVAYTYVRKL 174
Query: 194 EGF-FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ ++F + + T+ L+ GL + + +
Sbjct: 175 GKQGERGPVIVMCFSVFSCIVTLPFIIVDHAPMSWQQTVCLLCAGLAAAGGQFSITAAYQ 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+A + + +Y+ + + L Q D + + I++ + V ++ K
Sbjct: 235 KAPAKEISVFDYSQVIFAAILGFVFLDQIPDALSITGYVIIIGSAVFKWWYSLRQDRK 292
>gi|110799407|ref|YP_695967.1| hypothetical protein CPF_1524 [Clostridium perfringens ATCC 13124]
gi|110674054|gb|ABG83041.1| putative membrane protein [Clostridium perfringens ATCC 13124]
Length = 287
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 94/292 (32%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + + +E R L S F+ +
Sbjct: 2 NNKTKGIILITISALSFALMSTFVKLSGDLPSIEKSFFRNLVSCFVAFYLV------KKD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L+ + + + YA+ + ++P + +FLK
Sbjct: 56 NALLFGHKENRLALIGRSALGTLGIWANYYAIDRLILSDATILNKLSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L + II L +L + SG AI SA V G
Sbjct: 116 EKLKPIHIICLLAAFSGVLFIVRPSGNLASNFIPAIIGLCSAAFAGGAYTFVRYLGGKEK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F +V F ++ +FLI G+ S + K A
Sbjct: 176 GATIVFFFSFFSIVTTFPIMLFQFETFSLEQFVFLILAGVAASCAQFALTAAYKYAPARD 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +YT + + + D + I + ++++A L + K
Sbjct: 236 ISIYDYTQVIFTALIGFVLFGDIPDKISLIGYVLILLASFSIFLYNKKEASK 287
>gi|53718737|ref|YP_107723.1| hypothetical protein BPSL1102 [Burkholderia pseudomallei K96243]
gi|217419984|ref|ZP_03451490.1| putative membrane protein [Burkholderia pseudomallei 576]
gi|237811472|ref|YP_002895923.1| hypothetical protein GBP346_A1202 [Burkholderia pseudomallei
MSHR346]
gi|254298435|ref|ZP_04965887.1| putative membrane protein [Burkholderia pseudomallei 406e]
gi|52209151|emb|CAH35095.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|157808383|gb|EDO85553.1| putative membrane protein [Burkholderia pseudomallei 406e]
gi|217397288|gb|EEC37304.1| putative membrane protein [Burkholderia pseudomallei 576]
gi|237504786|gb|ACQ97104.1| putative membrane protein [Burkholderia pseudomallei MSHR346]
Length = 356
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + + +G ++ ++ VL ++ R + +
Sbjct: 7 SSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 RWP------RGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 121 WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFS 248
V I + + P + + F
Sbjct: 181 DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAG 296
Score = 43.0 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|114319877|ref|YP_741560.1| hypothetical protein Mlg_0716 [Alkalilimnicola ehrlichii MLHE-1]
gi|114226271|gb|ABI56070.1| protein of unknown function DUF6, transmembrane [Alkalilimnicola
ehrlichii MLHE-1]
Length = 313
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/298 (8%), Positives = 81/298 (27%), Gaps = 18/298 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ P ++ L + + WG + + + + R + +L +
Sbjct: 6 SLRNPVVLAVLGLVATTLFWGGNAVVARATSEWFPPFTLSFLRWVLALLIILPFAWGQIR 65
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ V +A + + A + PV+ +
Sbjct: 66 AYRETI----RRHWRILWVLAALSVGLFNTLLYLAAQFTTATNITLVNSTMPVVIGLMAL 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------------LLSLAIAVTWSAYCF 183
+F +R +++ +L L +L + +L +
Sbjct: 122 LFFGQRPRSHELLGIVLAFLGVLAIVSQGDREVLLNLELNPGDLVMLLAVCCWGLYSLLL 181
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
R + + + + + + ++VW G + +
Sbjct: 182 KRYGPDIPAVPMLAVMVAMGIPVIVPFLVWELIMVGPVQGTVMEMLPPLIYVGIFPSLLA 241
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ G+ + + Y P+ ++ L + ++ + ++ + V
Sbjct: 242 YLFWNNGVHVLGPARTALFIYLVPVFGSALAILFLGERLEPYHGVGAAAILAGLYVAT 299
Score = 37.2 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 6/133 (4%), Positives = 33/133 (24%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ F + + L + + + +
Sbjct: 20 ATTLFWGGNAVVARATSEWFPPFTLSFLRWVLALLIILPFAWGQIRAYRETIRRHWRILW 79
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ L + + + + ++ T P+++ + ++ Q + + +
Sbjct: 80 VLAALSVGLFNTLLYLAAQFTTATNITLVNSTMPVVIGLMALLFFGQRPRSHELLGIVLA 139
Query: 294 VIAMVVYLLPTVI 306
+ ++ +
Sbjct: 140 FLGVLAIVSQGDR 152
>gi|303325643|ref|ZP_07356086.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
gi|302863559|gb|EFL86490.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
Length = 301
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 89/303 (29%), Gaps = 17/303 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T +G A I+W + + L + + R L +L +
Sbjct: 2 QQTALGYGSALLATIIWSGNFVVARALATLIPPWQCNFWRWLVALAVLLPFAWRHLK--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + A T + + P++ + +
Sbjct: 59 -RDWPGIRRHWLYLSLMAVLGVTLMNTLIYKAGQTTESLNMALLVPTAPIVILLFSRIIY 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKT 187
E + ++ L+++ ++I+ G F R+
Sbjct: 118 GEPITPRRMAGMLVVLAGVIILVSRGDWQRLAGLRINSGDFWALGGALCFGLYSLFMRQR 177
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S GF + L + + T L + F F +
Sbjct: 178 SGDVSPLGFNVATFSLGLLYSLPFTVAEACLLPRPEISPALVTGILYAGVGCSFFSFWFW 237
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + R GI+ Y+ P+ V+SV +L + I + +V+ ++V L +
Sbjct: 238 TLAVDRIGPVRAGIVYYSLPVFAAVASVLVLGESIAPAQVAGGVLVIGGILVATLVIPHH 297
Query: 308 SGK 310
+
Sbjct: 298 RKQ 300
>gi|315605475|ref|ZP_07880513.1| DMT superfamily drug/metabolite transporter RarD [Actinomyces sp.
oral taxon 180 str. F0310]
gi|315312821|gb|EFU60900.1| DMT superfamily drug/metabolite transporter RarD [Actinomyces sp.
oral taxon 180 str. F0310]
Length = 316
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 69/308 (22%), Positives = 129/308 (41%), Gaps = 13/308 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ Y++WG PLY L +EVI HR +W L A + +G
Sbjct: 2 SPQKNEPRALALGISCYVIWGFFPLYFSRLAPAGAVEVIVHRAVWGLVF-CLAALAVTGS 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++ + + A+ L + ++ V+W ++YA+L + YF+ P++++ LG +
Sbjct: 61 LGKVRALIADRGALWRLAVAGALVVVNWSVYVYAVLAGHTTDAAIGYFINPLVTIALGLI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSE 194
L+ER+ +Q IA L L++LI+ + ++ A+ + V
Sbjct: 121 VLRERITPIQKIALGLGALAVLILVVGQRSVPITSLTLALTFGLYSLVKKDVAARVDPLA 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFL---------GNIPDTLFLIGYGLLNSFVFC 245
G IE ++ L Y + + F + L+G G L
Sbjct: 181 GMAIETAAVSPLLLGYYAYLAATSSTSFHTIASSDEAGTSWMVHLALLVGAGALTMIPLI 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+F+ + L T+G ++Y P L ++ +VFI + + T+R I GIV +A+
Sbjct: 241 MFASAARGLTLGTMGFLQYLGPTLQLLVAVFIFHESVPTIRWIAMGIVWVALACLSADWA 300
Query: 306 INSGKNKT 313
+ S + +
Sbjct: 301 LTSIRTRR 308
>gi|46579417|ref|YP_010225.1| hypothetical protein DVU1004 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448831|gb|AAS95484.1| membrane protein, putative [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233239|gb|ADP86093.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
vulgaris RCH1]
Length = 294
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 83/286 (29%), Gaps = 11/286 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L V A LW + +F E +S E+ R +
Sbjct: 1 MTGYLLVLLAASLWALIGPLARFCMDEGLSPPEIALWRAAFGALFFAL------HAWRCG 54
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ M F + V +G + YA+ L + + P L + L E
Sbjct: 55 LWRVDPRHGAAMSAFGIVGVGVLFGSYQYAVQEGGAALAAVLLYTAPAWVAVLSRLLLHE 114
Query: 142 RLNHLQIIAALLIILSL---LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ++ A ++ + + + I + +
Sbjct: 115 PLTRRKLAALVVAMTGAVLTCLSGGGLSGGASTAGIVAGLISGFAYSLHYIFSAHWMRRY 174
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L + L V L + L + ++ GI+R +
Sbjct: 175 SPVTLYLYCLPAGVATLVPFTTFTHKTPTAWLLLVAIGLLTTYCAYFVYCEGIRRLAPTR 234
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
V I+ P+L + + + + + G+V+ A+ + +L
Sbjct: 235 VAIVANLEPVLAALLAYLWWGELFPPLGWLGAGLVLTAVFLIVLDR 280
>gi|259046946|ref|ZP_05737347.1| membrane protein [Granulicatella adiacens ATCC 49175]
gi|259036389|gb|EEW37644.1| membrane protein [Granulicatella adiacens ATCC 49175]
Length = 317
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/305 (11%), Positives = 96/305 (31%), Gaps = 10/305 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + GTL A I WG++ Q+L + VL + R++ S +
Sbjct: 7 TKQPKQKILKGTLMTLFAGIAWGMSGASGQYLMAHGIGVLALTDLRLIISGTLLLLMSYL 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
F+ K+ ++ + L ++ ++ A+ + ++ PVI +
Sbjct: 67 FNREQLCSFFKEKSNYVKIIIF-AFVGLFLNQFSYLQAIALSNAGTATVLQYLCPVIILV 125
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARK 186
+ + ++ + +L + ++ H L I ++ +
Sbjct: 126 YICLKNRTAPTASEVTSIVLAMAGTFLIATHGQWNQLSVTPLGLFWGIFSAFTYAIYIML 185
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
I + + G + V + A + + + +
Sbjct: 186 PIKLIQTYGSLTVIGVGMVIAGVILFPMSGLTTLQLEYSVDILAALTGIILIGTVISYTM 245
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F G ++ P+ + + I+ + + + +++ A+V+ + ++
Sbjct: 246 FLKGTSYIGPVKSSLIAAVEPISAVFFAFLIMNEHFYAIDFVGMAMILGAVVLISVRDLL 305
Query: 307 NSGKN 311
+
Sbjct: 306 KERRK 310
>gi|217974870|ref|YP_002359621.1| hypothetical protein Sbal223_3720 [Shewanella baltica OS223]
gi|217500005|gb|ACK48198.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS223]
Length = 293
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 115/299 (38%), Gaps = 9/299 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G + + A +L+G T L+++ + +S L++ R + + + + L
Sbjct: 1 MSSAKPSGLIELHLAVLLFGGTALFSKLI-PLSALDITFLRCIVAATVLGLLVKLSRKRL 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L + + + + I+++HW + A+ + ++F PV++V +
Sbjct: 60 TL-----ASKQDYLVAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ L II+ L+++ ++++ L +AI + + AR +
Sbjct: 115 TGSKIKLLDIISGALVLIGVILLIPEANLGNDTTLGIAIGIVSAILFTARNLLHKRYFSQ 174
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V + E + L ++ + + +F+ +++
Sbjct: 175 YSGPHAMFYQTLVAVVFLMPWHQTELNSISLEVWGLIILLGVVFTAAPHALFTSALRQLS 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
TVG++ P + ++ IL + ++ I I+V + + + + K
Sbjct: 235 AKTVGLVSCLQPFYGAMLALIILSEELNLNTVIGGTIIVATAIFETHQSHQSQRRKKNA 293
>gi|172061290|ref|YP_001808942.1| hypothetical protein BamMC406_2247 [Burkholderia ambifaria MC40-6]
gi|171993807|gb|ACB64726.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria MC40-6]
Length = 309
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 93/290 (32%), Gaps = 16/290 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S P + G L+V + +G ++ ++ V VL ++ R + +
Sbjct: 7 SSSPALQGALYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAILAAIARHRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ V ++ A + AL Q L + ++ P L +
Sbjct: 67 AWP------RGRTLVPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A +L + +M L +A+A+ + ++ G
Sbjct: 121 WWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALASAVIYSLYIVGGTKATRGV 180
Query: 197 FIEMCVLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I A+ V F + L + F
Sbjct: 181 DPLATTAIICLSATATLVAIAIVRTAAFGAPPRWPATTAGWASMLAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G++R + ++ P++ + + + + + ++ ++ A++
Sbjct: 241 AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVL 290
Score = 39.1 bits (89), Expect = 0.87, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%)
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + L + ++ A+ S V ++ Y P + + + +
Sbjct: 63 HRRVAWPRGRTLVPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWW 122
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPT 304
L + + + + + V + +
Sbjct: 123 LGERLTRAKAVALVLCVAGSALMVGGG 149
>gi|168207648|ref|ZP_02633653.1| putative membrane protein [Clostridium perfringens E str. JGS1987]
gi|170661021|gb|EDT13704.1| putative membrane protein [Clostridium perfringens E str. JGS1987]
Length = 287
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 92/292 (31%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + + +E R L S F+ +
Sbjct: 2 NNKTKGIILITISALSFALMSTFVKLSGDLPSIEKSFFRNLVSCFVAFYLV------KKD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ + + + YA+ + ++P + +FLK
Sbjct: 56 NALLFGQKENRLALIGRSALGTLGIWANYYAIDRLILSDATILNKLSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+L + II L +L + SG AI SA V G
Sbjct: 116 EKLKPIHIICLLAAFSGVLFIVRPSGNLASNFIPAIIGLCSAAFAGGAYTFVRYLGGKEK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F +V F ++ FLI G+ S + K A
Sbjct: 176 GATIVFFFSFFSIVTTFPIMLFQFETFSLEQFAFLILAGVAASCAQFALTAAYKYAPARD 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +YT + + + D + I + ++++A L + K
Sbjct: 236 ISIYDYTQVIFTALIGFVLFGDIPDKISLIGYALILLASFSIFLYNKKEASK 287
>gi|167753231|ref|ZP_02425358.1| hypothetical protein ALIPUT_01502 [Alistipes putredinis DSM 17216]
gi|167659162|gb|EDS03292.1| hypothetical protein ALIPUT_01502 [Alistipes putredinis DSM 17216]
Length = 302
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 98/301 (32%), Gaps = 17/301 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G ++ + +G+ PL++ L + S EV+S+R + + +
Sbjct: 1 MKNFKGIIYAALSSSTFGLAPLFSILLLSDGFSSFEVLSYRWGVASLTLGIIGLAGGCRF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + F + A + A + S +F+ P+ ++F
Sbjct: 61 RI------SRQELCTVFFLSLFRAATSLSLVIAYQNISSGVASIIHFMYPLAVALAMALF 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIP 189
+ER++ A + + + +++ A ++ Y +
Sbjct: 115 FRERISWRTAAAIGVSLAGVALLSTGGIGSRGGDTTAGTIAAAVSVFAYAGYIIGVRKSR 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
E + V+A AL ++ F+GG L +
Sbjct: 175 AAQVESTTLTFYVMAFGALLFLCGGMFTGGVRLVTDGKERLAILGLALPATAISNITLVR 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IK + I PL + + + + G+VV A+ + +L T +
Sbjct: 235 AIKFIGPTLTSIFGALEPLTAVAIGATVFGERFGWTSALGVGLVVAAVSIVVLDTQRKTW 294
Query: 310 K 310
K
Sbjct: 295 K 295
>gi|294011521|ref|YP_003544981.1| chloramphenicol-sensitive protein RarD [Sphingobium japonicum
UT26S]
gi|292674851|dbj|BAI96369.1| chloramphenicol-sensitive protein RarD [Sphingobium japonicum
UT26S]
Length = 285
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 58/285 (20%), Positives = 134/285 (47%), Gaps = 1/285 (0%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
AY LWG+ P+Y + L V+ +E++S R+L + A++ L+ L L++ + +
Sbjct: 2 TAYGLWGLLPIYFKLLHHVNAVEIVSQRIL-WSLLLILALLLARRSLADLGPILRDRRLL 60
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
L SA ++ +W +++A+ S YF+ P+++V LG + L+ERL Q+ A
Sbjct: 61 SALAASAVMIGANWLTYVWAVNAGHVLAASLGYFLNPLVTVGLGVLLLRERLRRGQVAAV 120
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
+ + + IM + L A+ + + + +L +PA
Sbjct: 121 GIAAVGVAIMAATALTTLWISVALALSFAFYALIRKLTPVAPMAGLGVETLLLMPAAMAY 180
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
++ + G F + P T+ LI G + + +F+ R ++T+G+++Y AP +
Sbjct: 181 LFWLSAHGGISFGQDAPTTILLIAAGAVTTVPLLLFATAAHRLPMATLGLLQYLAPSMQF 240
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + + + + + F ++ ++++++ ++ + +N+ +
Sbjct: 241 LCGILLFGERLTAGQMTSFALIWLSLILFAADSLTAARRNRLATA 285
>gi|119485153|ref|ZP_01619538.1| hypothetical protein L8106_06884 [Lyngbya sp. PCC 8106]
gi|119457381|gb|EAW38506.1| hypothetical protein L8106_06884 [Lyngbya sp. PCC 8106]
Length = 569
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/335 (8%), Positives = 100/335 (29%), Gaps = 36/335 (10%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS-VLEVISH--------------- 58
+S +G + + + + + + Q ++
Sbjct: 235 QATQSSSSVQLGLFLALMSAVALSLFNVCLKIILQGPEPRQIFGLFEIEGIISPGLGNSL 294
Query: 59 -----RVLWSLPGV-FFAIVYFSGGLSLLKDTL--KNPKAVGMLVFSATILAVHWGFFIY 110
R++ + + A + S +K + ++ + +++ S L +
Sbjct: 295 LILLLRMIVVMALMPIVATFLYPAVWSDMKRFIQSRDTSLMLIVIGSGFFLFLSQVCIYI 354
Query: 111 ALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS--LLIMTLHSGIP 168
A+ + +F+ P+++V +R +++IA ++I+ L + + G
Sbjct: 355 AIGEIPTGIAITIFFIYPIVTVLASWGLFGDRPTLIRVIAMVIILGGGVLCLPSFFGGAA 414
Query: 169 LLSLA----------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
+ + + + +
Sbjct: 415 GNTQVGIIAAMSAGVAFAGYVLLTQMAAGKLHPIPFSLVNFASIFVFCCVSLIFLPDNLS 474
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ + G+L + + ++ I+ A + I+ + P L + + FI+
Sbjct: 475 MDVDVNVWQGLMFGGVVLGVLTLCSYLLNNFAIRSAGAALASIIGTSGPALTALFAFFII 534
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + + + +V++ + ++ + K
Sbjct: 535 GEALTPKQILGMALVILGVGAMSFERLVKAKKKAA 569
>gi|282163480|ref|YP_003355865.1| hypothetical protein MCP_0810 [Methanocella paludicola SANAE]
gi|282155794|dbj|BAI60882.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 312
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 91/281 (32%), Gaps = 12/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + LWG + + ++ LE + +E+ + R ++P + + G +
Sbjct: 11 LTLVFVMALWGGSFIASKIGLEGLYPVELATLRFAIAVPLLIAITLLIEGRKAFRIAP-- 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+++ + T + + + A+ T+ + + ++FLKERL+
Sbjct: 69 -KDLPVLIIMALTGVTLQYIVQFAAMTFTSVTNTALLINMGTFFVIIPSALFLKERLSID 127
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF--------I 198
I+ ++ L ++ + I C I + +
Sbjct: 128 NIMGIVIAFLGAALVATNGVFAFTPNLIGDGLVILCAVMWAIYILVGNKLAGKYSVLSQL 187
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V+ L L + + + F+ I R S
Sbjct: 188 NYIFIIGFIGLLPVYFLTPHHAFGSLSITTWECILYLAVVCSVIAYFFFNDAIIRLGPSK 247
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I +Y P IV ++ +L +P+ + ++ + +
Sbjct: 248 TAIYQYLEPFFAIVLAIALLSEPLTAAIAMGAAFIIAGIAM 288
>gi|255262777|ref|ZP_05342119.1| integral membrane protein, putative [Thalassiobium sp. R2A62]
gi|255105112|gb|EET47786.1| integral membrane protein, putative [Thalassiobium sp. R2A62]
Length = 320
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 87/283 (30%), Gaps = 7/283 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G +F A+ ++ ++ + L + S ++++ VL S P + +
Sbjct: 4 NVRGAIFALLAFGVFSTHDVFVKILGGIYSPIQIVFFSVLLSFP------LATVMMMRDA 57
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P+ + YA T F P++ L L E
Sbjct: 58 TPGTLLPRHPWWMAARTVAATATGVTAFYAFSVLPLAQTYTILFAMPLLITILSIPVLGE 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + IA L+ + ++I+ PL A +A + +I V ++
Sbjct: 118 TVRLRRWIAVLVGLAGVIIVLQPGSTPLSLGHAAALVAAVGGSVASIVVRKIGQDERKVV 177
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L P G + + I L L + + + V
Sbjct: 178 LLIYPMCANFAVMGCALPFVYREMPIEHFGMLAVIALFAWIAGRLIVEAYQAGEAVIVAP 237
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
M+Y+ L + + I +++ + + +L
Sbjct: 238 MQYSQILWATGFGILFFGERPSLNTMIGAAVIIGSGLYIVLRE 280
>gi|229542028|ref|ZP_04431088.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
gi|229326448|gb|EEN92123.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
Length = 309
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 88/297 (29%), Gaps = 12/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + A +WG + +++ L V L ++ R + ++ +
Sbjct: 2 KNKWAGALCLTLASGIWGGMYVVSKYVLNFVPPLTLLWLRYMIGFAALYAILHAGRKKKE 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T K+ + + +PV V L
Sbjct: 62 KVSLTKKDWLL--LAWIGFIGYFASVAMQFIGTQKADAHTGAIITSASPVFIVIFARFIL 119
Query: 140 KERLNHLQIIAALLIILSLLIMT---------LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
KE+L +I+A + ++I+ + L I + + +
Sbjct: 120 KEKLTARKILALITASAGVVIVIGWDIHVQTYFWGSLILAGAMITWALLSVYVKVASWKM 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S + + + G L + + F +++ G
Sbjct: 180 DSLTITTYAILFGLLFTTPFAAREAMMAWPVSSGGFWGMAGILYLGVISTAGAFFLWNKG 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + + + + P+ +L + ++ + +++ A+ + LLP +
Sbjct: 240 LEMVEAGSGSLFMFLQPVTGSFLGWLLLHENLNGRFFLGGALILAAIAISLLPERMR 296
>gi|23098848|ref|NP_692314.1| hypothetical protein OB1393 [Oceanobacillus iheyensis HTE831]
gi|22777075|dbj|BAC13349.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 298
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 95/297 (31%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
L + LWG Y + L + +E++ R + + ++ + LK
Sbjct: 5 ILLIVIGAGLWGTISWYVKHLSEFGFTPMEIVILRAWSTAIILVPFLIITNRNQLKLKAW 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + A+ + + + P L + KE+L
Sbjct: 65 T---DIKYFIGTGIFSIIFFNFCMFTAIELTTIPVATSLLYTGPAFVTILSWMLFKEQLT 121
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIPVGSSEGF 196
++IIA ++ ++ +G L +L I A +
Sbjct: 122 KIKIIALFSTLIGTCLVAGIAGSSLQNLHITGVLFGLGSGFGYALYSIFSKYALQKYSSL 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + A+ + + + + P L + L + + ++YG++ +
Sbjct: 182 TVTTFTFIVAAVALIPFFPYQEKITLLMNPAPLLLAIGLGFLPTALAYIFYTYGLQFVEA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S I+ P++ + + +P+ V+ ++ A+++ K +T
Sbjct: 242 SKASILSTIEPVVATFIGIMVFTEPLSVVQFAGMLAIIGAVLLMQFSNKQQIKKQET 298
>gi|323702562|ref|ZP_08114225.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
gi|323532536|gb|EGB22412.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
Length = 301
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 94/294 (31%), Gaps = 18/294 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++G ++ A +WG + +++ L+ V L ++ R + + + +
Sbjct: 1 MEKLLGAFYLSLAAGIWGGMYVVSKYVLDFVPPLTLVVLRFIIASVVLGLIFLATR---- 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ M V G + + +P V G + L
Sbjct: 57 --DKPVAKEDIKLMAWLGFIGYTVSIGAQFAGTWLSSAHMGAVITSASPAFIVIFGVLLL 114
Query: 140 KERLNHLQIIAALLIILSLLIM-----------TLHSGIPLLSLAIAVTWSAYCFARKTI 188
KE++ +IIA ++ + ++ +L + L+ A++ + T
Sbjct: 115 KEKITLTKIIALVIATAGVGVVVGIGGEDLAGGSLAGNLFLVLAAVSWALYSVLGKIATR 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S + +W H + L + + F ++
Sbjct: 175 KYSSLAVTLYASLFGVVFTGPLSLWELTKLPAHPLANHWVWLGILYLGIVSTAGAFYFWN 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G + S+ I + P+L + IL + ++T I +++ + +
Sbjct: 235 KGFELMDASSAAIFFFVQPVLGSLLGWLILNEHLETNFFIGGAMILAGVAITSF 288
>gi|296242047|ref|YP_003649534.1| hypothetical protein Tagg_0306 [Thermosphaera aggregans DSM 11486]
gi|296094631|gb|ADG90582.1| protein of unknown function DUF6 transmembrane [Thermosphaera
aggregans DSM 11486]
Length = 294
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 96/300 (32%), Gaps = 8/300 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+++ + G F+ ILWG + + + +E+VS +R L S+ + +
Sbjct: 2 ADSSKRGKIKGIFFLVLTTILWGTSFSFIKLSVEEVSGFSYTFYRGLISILILTILLAAK 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + G+ + +L ++ + + V L
Sbjct: 62 HARQGIDAKSFIKGLYTGVAYTTGLLLQGLGTQYVTPSTSAFIT-------GLNTVHVHL 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ FL + ++ +L I L I+T L + S A+ + S
Sbjct: 115 YAGFLARKYGLTHAVSLVLAISGLYILTSPQNSGGLGEILVFMGSISWAAQIILVSKYSG 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+E ++ F L + G K
Sbjct: 175 SSMLEYLYGMFTPTLFLAPYVFIVENGGELSLNAIVYIAYLAVACSLGATYFQVKGQKYV 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S+ I+ P+ ++ S+ + + + + + G++V+A+ + + + K++
Sbjct: 235 TASSAAIIFLLEPVFALIFSLVMGLEDLVLYKLVGGGLIVLAIYITTIGELKEYNKSRHA 294
>gi|257065422|ref|YP_003145094.1| predicted membrane protein [Slackia heliotrinireducens DSM 20476]
gi|256793075|gb|ACV23745.1| predicted membrane protein [Slackia heliotrinireducens DSM 20476]
Length = 289
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 95/293 (32%), Gaps = 11/293 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L V + +G+ P++ + + SV + R ++ +F +
Sbjct: 3 HSSRAVGLLLVAGSAFAFGVMPVFIKMAYAAGASVYTTLFLRFVFGAVCIFPLMFILK-- 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + L+ F+ AL + + + P + V +
Sbjct: 61 ----LPMPSRREIITFLLLGGIGYVAQSFFYFAALEYTTASVAALLLYTYPALVVLGSVL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
KE++ + +A + + +++L I + A+A S + V
Sbjct: 117 VFKEKITLPKAVALVFALAGACVVSLGQLDGSIIGAAFALASAASYTIYILINSRVVEEG 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + ++ G + +F F F G+++
Sbjct: 177 KGIQSTAFIILGSVIVFGIMNLIVGFEPPTTATGLFAIAVIGLFSTAFAFWAFLTGLEKV 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S I+ P+ +V SV L +P+ + +VV A+++ L N
Sbjct: 237 GPSDAAIISTLEPVAAVVCSVLFLSEPLTINVIVGGCLVVAALLITSLSDRTN 289
>gi|163740871|ref|ZP_02148264.1| hypothetical protein RG210_13561 [Phaeobacter gallaeciensis 2.10]
gi|161385862|gb|EDQ10238.1| hypothetical protein RG210_13561 [Phaeobacter gallaeciensis 2.10]
Length = 315
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 102/304 (33%), Gaps = 8/304 (2%)
Query: 8 KEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPG 66
+ S ++ A+ + G ++ + ++L V E R L L
Sbjct: 8 SQNSPSPAQSTAANQPLRGVFWMLMTGFCFVAVTALVKYLGDRVPPAESAFLRYLLGLVF 67
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
+ I + P+ G+ + + + +A+ + ++
Sbjct: 68 LLPMIGALRR-------SQLTPRLWGLFAMRGFVHTLGVILWFFAMTQIPLAEVTAMNYL 120
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK 186
+P+ ++FL ER+ ++ A L+ ++ LI+ + + IA+ ++A F
Sbjct: 121 SPIYVSIGAALFLGERMALRRVGAILVALIGALIILRPGFREVEAGHIAMLFTALAFGAS 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ ++ + V+A+ +++ V+ + + + L G +
Sbjct: 181 YLLAKTTVDGTSPVVVVAMLSIWVTVFLAPFAAAVWVTPTLWELAILFGVACFATAGHYT 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A ++ + + L + + + +D +++ A+ +
Sbjct: 241 MTLAFASAPVTVTQPVTFLQLLWATLLGALVFGEAVDIWVVAGGCLILAAVSFITWREAV 300
Query: 307 NSGK 310
+
Sbjct: 301 LKRR 304
>gi|78043709|ref|YP_358973.1| hypothetical protein CHY_0101 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995824|gb|ABB14723.1| putative membrane protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 287
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 86/283 (30%), Gaps = 13/283 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L F + +G+ P++ F E S ++ R + Y G + K
Sbjct: 6 RGVLLTFLSAAGFGLLPIFAVFAYKEGASPYTLLFWRFFLAGLIFQVYNYYVHKGFGITK 65
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ ++ + + F ++ LTS ++ P + L S+ K+R
Sbjct: 66 KEIL------YVLAMGILYTIQSSCFFLSVKYISASLTSLIFYTYPALVAILSSIVYKDR 119
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----WSAYCFARKTIPVGSSEGFF 197
L +A L L+++ + L + + +
Sbjct: 120 LGFKGFVAVALAFAGLILVLGNISGKLNPTGVLFALATALVYSVYITLGKKVLTQIPSLT 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ A+ ++V SG F F GI+ +
Sbjct: 180 ASSFIAVFAAMCFLVVGLLSGTLDFLPPEKVWFSISGIVVFSTLLAMFTFFRGIELLGPA 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
I+ P++ ++ + + + + + +V++ +
Sbjct: 240 RASIISMFEPVVTVIFAALLFAEKLTPGQIAGGALVLLGAYLV 282
>gi|134298317|ref|YP_001111813.1| hypothetical protein Dred_0442 [Desulfotomaculum reducens MI-1]
gi|134051017|gb|ABO48988.1| protein of unknown function DUF6, transmembrane [Desulfotomaculum
reducens MI-1]
Length = 302
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 95/291 (32%), Gaps = 12/291 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + F + + P++ + +V ++ R + + F + +S +
Sbjct: 6 KGVVLAFLSATGFAFIPIFALYAYEGGANVTTLLFLRFILAALCFFTYLALKKKSISFTR 65
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
LK +++ I + + ++ L ++ PV S+ KE+
Sbjct: 66 GNLK-----YLILLGGVIYTLQSNLYFSSVKYIPASLAVLFFYSYPVFVAVTSSLVDKEK 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKTIPVGSSEGFF 197
L +++ ++ +L L+++ S + L + A + + S
Sbjct: 121 LTKQIVLSIVISMLGLILVLGTSFGNINILGVLLALGAGIVYTFYIVLGNRVLKDSPVLE 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + V +G + L + F G++ +
Sbjct: 181 TSAFICLFAGISLAVIGVSTGTLNIHLTTKAWLAAVGVSLCCTVLAIFTFFRGMELIGST 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ PL+ IV S + + + ++ + V+I ++ +L
Sbjct: 241 RTSILSMVEPLITIVFSALLFGERMTALQILGGAAVLIGAILVVLSREKEK 291
>gi|296137957|ref|YP_003645200.1| hypothetical protein Tpau_0207 [Tsukamurella paurometabola DSM
20162]
gi|296026091|gb|ADG76861.1| protein of unknown function DUF6 transmembrane [Tsukamurella
paurometabola DSM 20162]
Length = 356
Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 81/291 (27%), Gaps = 7/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + W + + + VS + + R+L + +
Sbjct: 1 MKNRLPALALVIVMVAWASAFVVIRGIGPHVSPVPLAEGRLLVGAAVLGVIWALHALYTG 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + + + A A++ A T+ + P+I L FL
Sbjct: 61 DVRLP-RGRALALTVAYGALWFALYTVLVNAAEQHLDAGTTALLVNIAPIIVAVLAGAFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-----IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
E L ++ ++ + A + + S++
Sbjct: 120 HEGFPPLLTAGIVISFAGAAVIAFSGDGRRDGAGVALAVAAALLYGISVVAQKLVTRSTD 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I A+ + W E L + + F +++Y +
Sbjct: 180 PLTATALGAIIGAIVLLPWAPQLFRELAAAPIGSTAGVLYLGLVPTALAFLLWAYALAHT 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y P L I+ S L + + + ++ + V LP
Sbjct: 240 PAGVTASSSYAVPALSILLSWGFLAETPTAWGLLGGVLCLVGVAVARLPRR 290
>gi|255263473|ref|ZP_05342815.1| membrane protein [Thalassiobium sp. R2A62]
gi|255105808|gb|EET48482.1| membrane protein [Thalassiobium sp. R2A62]
Length = 300
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/286 (15%), Positives = 98/286 (34%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M G + + A L+ + + + +V + + R ++LP + + LK
Sbjct: 2 MRGVMLMMSAVTLFVVMQAFIKAAGRVPAGQAVFFRSFFALPVILMWLWIRHDMRDGLKT 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
A+ + + + +G L + +V LG F K RL
Sbjct: 62 KNWKGHALRGICGTTAMGLGFYGLKFLPLPETTAIRFVTPILIVIFAAVLLGETFRKVRL 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + ++I+ +T G + I S+ A I V + G + ++
Sbjct: 122 AAVLLGLCGVLIIMWPRLTFDLGDMAMIGVIVTLGSSALAALAQIFVKAMAGRERTVAIV 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+L + + + + +LIG GL+ + + + A ST+
Sbjct: 182 FYFSLTASTLGLMTAPFGWVMPIGVEWAYLIGAGLIGGVGQILLTSSYRFADASTLAPFT 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y + L ++ F + G++++A V+ +L
Sbjct: 242 YVSMLWALIIGYFWFAEVPTLTMLFGAGLIIVAGVIIVLRERALGR 287
>gi|320104808|ref|YP_004180399.1| hypothetical protein Isop_3288 [Isosphaera pallida ATCC 43644]
gi|319752090|gb|ADV63850.1| protein of unknown function DUF6 transmembrane [Isosphaera pallida
ATCC 43644]
Length = 356
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 85/295 (28%), Gaps = 19/295 (6%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L V A +LW I+ + T+ + + + R + + + +
Sbjct: 63 RTGRLMVVAAAVLWSISGVATKAI-DLDPWTIAFFRGACAGLVLLPLVPRQGRVVR---- 117
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ G ++ A+ F + +G V L E+
Sbjct: 118 --------PAMLPMILCFGAMSGLYLAAIKATTAANAIFLQCSATFWLIPIGYVLLGEKP 169
Query: 144 NHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + L + ++ + + ++L I + + +
Sbjct: 170 DPRALAGIGLAMAGVVTIVAASVVQGTGDLVGIALGIGSGVAYAGVVVSLRSFRGLDPLW 229
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ AL + G + + + + +F+ G++ +
Sbjct: 230 LSSVNNLGGALVILAAVWLIQGPIAWPSPAMLVALTTFGVVQMAIPYVLFARGLRVVPAA 289
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ P+L + + D I ++ +V+ LP S + +
Sbjct: 290 EGALLALLEPILSPFWVFLFIGEQPDGFSLIGGACLLGGIVLRYLPLPRWSERRR 344
>gi|314936972|ref|ZP_07844319.1| integral membrane domain protein [Staphylococcus hominis subsp.
hominis C80]
gi|313655591|gb|EFS19336.1| integral membrane domain protein [Staphylococcus hominis subsp.
hominis C80]
Length = 293
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 100/288 (34%), Gaps = 6/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I+ + +
Sbjct: 7 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIIKYRQPI-- 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + +L+ +T+ + IYA+ + P ++ L +FLK
Sbjct: 65 ----LGKMSSQPLLMTRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLK 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + QIIA L+ I +L + + ++A +S A V +
Sbjct: 121 ENIKRYQIIAMLIAIFGMLFIVKPEFSSTMFSSLAGLFSGIFAASAYTCVRALSKREAPY 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + ++L+G GL + + A +
Sbjct: 181 TIVFYFSLFSVIVLIPFSIATYEPMTKLQIIYLLGAGLSAAVGQIGITLAYSFAPAKDIS 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I Y + L + + + D I + I++ A S
Sbjct: 241 IFTYASILFTALFGFILFGETPDFYAFIGYIIIIGASYFMFEKARRQS 288
>gi|222056889|ref|YP_002539251.1| protein of unknown function DUF6 transmembrane [Geobacter sp.
FRC-32]
gi|221566178|gb|ACM22150.1| protein of unknown function DUF6 transmembrane [Geobacter sp.
FRC-32]
Length = 315
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/294 (8%), Positives = 90/294 (30%), Gaps = 12/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T T ++ LWG + ++ + ++ + + R L + + +
Sbjct: 10 SETRRATPWLILTTFLWGGSFVFNKIGFREIPPVTFLFLRFLLAAVMMALVCL------- 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ N V L F+ + F + ++ L +
Sbjct: 63 -PRLKKINRDIVRRGAMVGIALTAANLSFVIGVSGTSATRAGFLNNLFVLVVPLLCYLIW 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---LLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+++++ L L + ++ + G + S A+ + + + + + + +
Sbjct: 122 RDKVDRLTFAGLCLAVSGIIALAAGGGFSRGDIFSTICALFIALHIISVSKVLRSNDDVY 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I + + + F +G + F + + +
Sbjct: 182 LITLFQFITVTILGGLLVLILPQPEFHMGPVSAGALFYCALFPTVICFTVQNTFQRFTTP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ P+ ++ +L + + + ++ ++V+ L ++ +
Sbjct: 242 TRASLIYTLDPVWSMLGGFALLGERLGVWEALGCVLIFSSVVMPLTVKLVAERR 295
>gi|269925907|ref|YP_003322530.1| protein of unknown function DUF6 transmembrane [Thermobaculum
terrenum ATCC BAA-798]
gi|269789567|gb|ACZ41708.1| protein of unknown function DUF6 transmembrane [Thermobaculum
terrenum ATCC BAA-798]
Length = 296
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 98/294 (33%), Gaps = 12/294 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G F A ++ + + + ++ +S +E+ R+L + V A + S
Sbjct: 8 RTKQLSGIALAFVAVSMFSTSAVLIRVIKDISSIEITFWRMLIAGLLVLGAALISSQ--- 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+LK+ + + A+H+ F+I +L + + PV ++ L
Sbjct: 65 ---LSLKHNPFNYRFLAYGLVAAMHFFFYIASLEYTTVSNSLALVYTAPVFVALFAALAL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVGSS 193
E +N Q + ++++ ++I + S I + ++ +
Sbjct: 122 HESINWRQWLGICIVVVGVMIFSGFDLGLDKSRLIGNFLAILSAAAFGVYSVMGRGERNK 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + A +++ + L + +++ ++R
Sbjct: 182 YPLLVYAGGTYLTASLWLLPLAAHSMINSSYSMTNIIALLALAIVPLGMGHTLYNAALRR 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ + + +K+P+ I I++ ++ +L
Sbjct: 242 IHAAHANVLSTLEVPGGTLLAWLFVKEPVTLRDMIGMFIILFGVLTVILTADRT 295
>gi|78355348|ref|YP_386797.1| hypothetical protein Dde_0301 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78217753|gb|ABB37102.1| membrane protein, putative [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 308
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 92/293 (31%), Gaps = 17/293 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S M+ L + +LW + + + + ++ + V+ R+ + +
Sbjct: 2 TPSQARMLPVLALLVTMLLWSSSFIAMKVAVMELDPMLVMFGRMTAASLC------FACC 55
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
SL + T + +L S ++ F YAL P+
Sbjct: 56 WRSLRRVTYRKGDWKPLLFMSLCEPCAYFVFEAYALRYTSASQAGMVVSTMPLFVAMAAF 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKT 187
+FL+ERL+ + + ++ +TL + +A+ +
Sbjct: 116 IFLRERLSRQVWAGFAVALCGVVWLTLAGEATEHASNPLLGNILECLAMASATGYVVTAK 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCI 246
FI +F++ G + +P + ++ +
Sbjct: 176 RLSSHYPPLFITAVQAFTGMVFFMPLAFRPGTALPETIPLLPALAVVYLGVAISLVAYGF 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++YG+ + P+L ++ L + + + +V+ +V+
Sbjct: 236 YNYGVSKMPAGQASAFINLIPVLTLLMGQVFLDEVFTPQQYVAAALVLAGVVL 288
Score = 43.4 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 42/131 (32%), Gaps = 2/131 (1%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + + F + V + + + +L + + G+ L
Sbjct: 16 VTMLLWSSSFIAMKVAVMELDPMLVMFGRMTAASLCFACCWRSLRRVTYRKGD--WKPLL 73
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F +Y ++ S G++ T PL + +++ L++ + F +
Sbjct: 74 FMSLCEPCAYFVFEAYALRYTSASQAGMVVSTMPLFVAMAAFIFLRERLSRQVWAGFAVA 133
Query: 294 VIAMVVYLLPT 304
+ +V L
Sbjct: 134 LCGVVWLTLAG 144
>gi|120603028|ref|YP_967428.1| hypothetical protein Dvul_1985 [Desulfovibrio vulgaris DP4]
gi|120563257|gb|ABM29001.1| protein of unknown function DUF6, transmembrane [Desulfovibrio
vulgaris DP4]
Length = 294
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 83/286 (29%), Gaps = 11/286 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L V A LW + +F E +S E+ R +
Sbjct: 1 MTGYLLVLLAASLWALIGPLARFCMDEGLSPPEIALWRAAFGALFFAL------HAWRCG 54
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ M F + V +G + YA+ L + + P L + L E
Sbjct: 55 LWRVDPRHGAAMSAFGIVGVGVLFGSYQYAVQEGGAALAAVLLYTAPAWVAVLSRLLLHE 114
Query: 142 RLNHLQIIAALLIILSL---LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ++ A ++ + + + I + +
Sbjct: 115 PLTRRKLAALVVAMTGAVLTCLSGGGLSGGASTAGIVAGLISGFAYSLHYIFSAHWMRRY 174
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L + L V L + L + ++ GI+R +
Sbjct: 175 SPVTLYLYCLPAGVATLVPFTTFTHKTPTAWLLLVAIGLLTTYCAYFVYCEGIRRLAPTR 234
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
V I+ P+L + + + + + G+V+ A+ + +L
Sbjct: 235 VAIVANLEPVLAALLAYLWWGELFPPLGWLGAGLVLTAVFLIVLDR 280
>gi|289668899|ref|ZP_06489974.1| integral membrane protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 303
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 97/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
A+ + L++ + +G+ + + ++ E+ R + L + IV
Sbjct: 3 TAAQVSRRAALWMLTSTFAFGLMAITIRLASSTIATTEIAFFRNAFGLLALLPLIVRPGK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 63 PLPRTRQLP-------HYLARTLIGLASMLCGFWAIGHLPLSQAISLSYATPLFVTVLAV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E++ + +A + +L++ + +A A I +
Sbjct: 116 IWLHEQVRLRRWLAVAAGFIGVLVILRPGSSTFTPGLLIALLAAVISAVVAIQIKQLSRS 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + D L+L+ G+ + ++ +K ++
Sbjct: 176 DDSDTVVFYTYVFWVPMSLIPALFQWTWPQGIDWLWLVATGIFGTAGQLFWTRALKLGEV 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + + + L+ + ++ + I+ I I++ A V + + +
Sbjct: 236 SALQPISFMQLPLVALLGWWLFGEAIERHTVIGAAIIIGANVYIAHRETVLARR 289
>gi|303229029|ref|ZP_07315837.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516307|gb|EFL58241.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
Length = 313
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/302 (10%), Positives = 88/302 (29%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+G + WG++ QFLE ++V ++ R+L + + + Y
Sbjct: 1 MEEKQWIGMGLAIMGALFWGLSGTSVQFLENAKHLNVEWLLEVRLLVAGL-LTILLSYIQ 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G+ + +L+F +A+ + A+ + + +V P + +
Sbjct: 60 DGIRIFDIFKNPKDFGKLLIFGLLGIALAQYSYFKAIAISGVGVATVLQYVAPTMLIIYL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTI 188
+ ++ + L++ L ++ + + + G+ L + S + + I
Sbjct: 120 FIRYLKKPSLLELCCVALAMIGTVCIIMQKGLNLSAFNGDALFWGLISAASICVYTLEPI 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + L F +
Sbjct: 180 ELLKKYSTSSIVGFGMFISGILACILFHQVASEAIWDGMTLVGLFTIIILGTVVSFNAYI 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G++R I+ P+ + +L V ++ + +
Sbjct: 240 EGVRRIGAVQGSILSSLEPISAALFGWALLGNEFTLVGIFGMICIIATVFIIAWDRQRQI 299
Query: 309 GK 310
+
Sbjct: 300 KR 301
>gi|182417361|ref|ZP_02948695.1| integral membrane protein [Clostridium butyricum 5521]
gi|237667834|ref|ZP_04527818.1| integral membrane protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182378791|gb|EDT76313.1| integral membrane protein [Clostridium butyricum 5521]
gi|237656182|gb|EEP53738.1| integral membrane protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 314
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/301 (9%), Positives = 94/301 (31%), Gaps = 8/301 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
++K+ + G + + A ILWG L+ + ++ + + + R + + I
Sbjct: 1 MNKKYIDKNVIKGEIILLLASILWGSCFLFQKKGMDYIGPFTLGAFRFMIGGSLLIPIIY 60
Query: 73 YFSGGLSL--LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
FS L+ + V ++ F L+ F +I
Sbjct: 61 VFSFNKRAEGLRVQYGKKDLIKSGVLCGIVMFFAATFQQIGLIYTTSGKAGFIT-AMEII 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG----IPLLSLAIAVTWSAYCFARK 186
V + ++F+ +++ ++ ++ + + ++ + +G + + + + +
Sbjct: 120 VVAIAAIFITKKIFLNIVLGIVIALSGMYLLCITNGISVQMGDCIVFLGSIFFGFQIMLI 179
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + + + + + + +
Sbjct: 180 DKYSKIYDVIKLSFVQFITSGVMSAICMFAFETIDIGSIIMAVGPIIYTSVIEVAVCYTL 239
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
G K I + ++ L + + ++IA+++ +P+
Sbjct: 240 QVVGQKYVPPVIAAITLTLESVFAVIFGAVFLGESMSLKEIYGCMFMLIAVIIVQIPSKK 299
Query: 307 N 307
+
Sbjct: 300 S 300
>gi|220924067|ref|YP_002499369.1| hypothetical protein Mnod_4189 [Methylobacterium nodulans ORS 2060]
gi|219948674|gb|ACL59066.1| protein of unknown function DUF6 transmembrane [Methylobacterium
nodulans ORS 2060]
Length = 313
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 93/293 (31%), Gaps = 4/293 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V + + + ++L + LE+ R + + A + GG
Sbjct: 24 QPLRGIALVILSTVFLSSSDATAKYLAGSLPPLEIAWLRYAGFVVVMLAASLV--GGARQ 81
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ G+ + L F+ L + FV+P+ L L
Sbjct: 82 RGRSPFRSARPGLQLLRGFALVASAVLFLCGLRYLPVAEATAISFVSPLFVTALSIPLLG 141
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + IAAL+ + +LI+ + A+ SA +A + G+
Sbjct: 142 ETIGMRRWIAALVGLCGVLIILRPGTSAFQAAALLPVASALFWALALVATRKINGYDAPQ 201
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ AL + N+ + GL+++ I + + A ST+
Sbjct: 202 TTMTWSALVGFALLTCVVPTVWTTPNLKEVAIGAAIGLISTTGHWIVTIAYRHAPASTLV 261
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
Y+ + + F D + +V+ A +Y G +
Sbjct: 262 PFSYSQIVWAALIGAFAFGSVPDAFMGLG-VLVIAASGLYTAHRERLRGVRRA 313
>gi|67924483|ref|ZP_00517906.1| Protein of unknown function DUF6 [Crocosphaera watsonii WH 8501]
gi|67853680|gb|EAM49016.1| Protein of unknown function DUF6 [Crocosphaera watsonii WH 8501]
Length = 289
Score = 82.3 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 105/289 (36%), Gaps = 8/289 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
S + G F+ A + + ++ + + + ++ R L+ L + ++
Sbjct: 2 TKSQNIVRGAFFIVTAEVSFALSAALIKLVSDSLPNQSIVFFRNLFGLLILTPLLL---- 57
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + +F + I F YAL + P+I F+
Sbjct: 58 ---NAGENILKTNRLHLHLFRSGIGMGAMYCFFYALANLPLADSMLIKSTIPLIIPFISL 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+LKE ++ I+A LL + + ++ G + S+ A + V
Sbjct: 115 AWLKESISKRIILAGLLGFIGVFVILNPDGNNTNWAILVAFSSSLMAALAFVTVRQLSST 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ ++ A+ ++ + + + L+G GL + + + G + A
Sbjct: 175 EPPLRIVTYFAIVGLIISAIPLTWTWQTPTFQQCVMLLGVGLTTTIGQLLLTRGYQNAPA 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
S+VGI YT+ ++ ++ + ++++A V+ L +
Sbjct: 235 SSVGIFTYTSVPFGTFLGWLFWQELLEPEFYLGAILIILAGVLVLRKKL 283
>gi|114771856|ref|ZP_01449249.1| RarD [alpha proteobacterium HTCC2255]
gi|114547672|gb|EAU50563.1| RarD [alpha proteobacterium HTCC2255]
Length = 283
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 76/288 (26%), Positives = 150/288 (52%), Gaps = 14/288 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+F A +WG + Y ++ QV LEV+SHR +W+ + ++ G + + K++
Sbjct: 1 MFLACSIWGFSAFYYSYISQVPPLEVLSHRTIWTSVFIGLILLARRGLVVIPKESFLR-- 58
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ F+A ++++W FFIYA+ + +S Y++ P+++V G++FL ERL+ Q
Sbjct: 59 ----VCFAAIFISINWFFFIYAVQIGKVAQSSLGYYIFPLVAVAFGAIFLGERLSPSQWF 114
Query: 150 AALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A L ++++++++ G P +S+ +AVT+ Y +K + +G F E+ L AL
Sbjct: 115 AISLAVIAVVLLSFGVGEFPYISIMLAVTFGLYGLVKKPLTIGPMRSVFWEVVCLLPIAL 174
Query: 209 FYVVWNGFSGGEH-------FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ F G + FF I ++ LI G+L + ++ ++R +L+TVG+
Sbjct: 175 IWLTGTHFFGWQGIVGRDGGFFGSEIKVSIALIFTGILTGVPLILMAFAMERLRLATVGL 234
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++Y P L + + FI +PI + I FG++ + +Y + +
Sbjct: 235 VQYVNPTLQFLLATFIFLEPIGRIHLIAFGLIWTGLGIYSYYAIRHER 282
>gi|115524270|ref|YP_781181.1| hypothetical protein RPE_2259 [Rhodopseudomonas palustris BisA53]
gi|115518217|gb|ABJ06201.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisA53]
Length = 312
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/311 (12%), Positives = 96/311 (30%), Gaps = 10/311 (3%)
Query: 2 GKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRV 60
T + + +++ + P G + + + + ++L + E+ R
Sbjct: 1 MTSTTPSDLERNVTRRHDDRP-FQGIALLIGSTLFLAASDSLAKYLSATMPSTEIAWIRF 59
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ + + + + + L FI L
Sbjct: 60 AVFVLILLPIALSSG-------SSPLRSHRPMLQILRGLTLVFSSLLFITGLRYLPIAEA 112
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA 180
S + FV P+ L V L ER+ + +A L+ +L +LI+ ++ +A
Sbjct: 113 SATSFVAPLFVTALSIVILAERVGGRRWLATLVGLLGVLIVVRPGTAAFDPASLLPIGAA 172
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ +A + G + +A A+ V + + + D +G G+ +
Sbjct: 173 FLWALTLVMTRMISGADRTVTTMAFSAIVGFVVLSVLVPFVWVMPSWRDLALAVGVGVAS 232
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + A S + Y + + V + + + D + ++ +Y
Sbjct: 233 TAGQWMVVLAFRHADASVLAPFSYVQLVWVTVIGLLVFAEMPDLWTFVGAAFII-GSGLY 291
Query: 301 LLPTVINSGKN 311
Sbjct: 292 TAHRERLRRLR 302
>gi|229012581|ref|ZP_04169755.1| Transporter, drug/metabolite exporter [Bacillus mycoides DSM 2048]
gi|228748741|gb|EEL98592.1| Transporter, drug/metabolite exporter [Bacillus mycoides DSM 2048]
Length = 300
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 97/295 (32%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 7 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYVILKTTEKKQK 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 67 KNVTIHKKDWLLFAWI-GFVGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 126 KEKLTARRLLSTIIATIGVVIVIGWDFEIGSYFIGTIILVGAAITWALLSIYVKIASARF 185
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 186 SSLVITTYAIFFSLFFITPFMVWEFQTNPIEHMNMYVVLGVLYLGIISTAGAFFLWNKGL 245
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ S + + P++ + F+L + + + I +++ ++++
Sbjct: 246 ELMDASIGSLFFFFQPIVGSLLGWFLLNETLSSNFFIGGILIICSVIITTFEKRK 300
>gi|53725871|ref|YP_103526.1| hypothetical protein BMA1932 [Burkholderia mallei ATCC 23344]
gi|121599074|ref|YP_992361.1| hypothetical protein BMASAVP1_A1021 [Burkholderia mallei SAVP1]
gi|124384521|ref|YP_001026834.1| hypothetical protein BMA10229_A0844 [Burkholderia mallei NCTC
10229]
gi|126449593|ref|YP_001079879.1| hypothetical protein BMA10247_0304 [Burkholderia mallei NCTC 10247]
gi|166999902|ref|ZP_02265731.1| putative membrane protein [Burkholderia mallei PRL-20]
gi|238560953|ref|ZP_00442543.2| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|254175358|ref|ZP_04882018.1| putative membrane protein [Burkholderia mallei ATCC 10399]
gi|254195116|ref|ZP_04901545.1| putative membrane protein [Burkholderia pseudomallei S13]
gi|254202210|ref|ZP_04908573.1| putative membrane protein [Burkholderia mallei FMH]
gi|254207543|ref|ZP_04913893.1| putative membrane protein [Burkholderia mallei JHU]
gi|254359956|ref|ZP_04976226.1| putative membrane protein [Burkholderia mallei 2002721280]
gi|52429294|gb|AAU49887.1| membrane protein, putative [Burkholderia mallei ATCC 23344]
gi|121227884|gb|ABM50402.1| putative membrane protein [Burkholderia mallei SAVP1]
gi|124292541|gb|ABN01810.1| putative membrane protein [Burkholderia mallei NCTC 10229]
gi|126242463|gb|ABO05556.1| putative membrane protein [Burkholderia mallei NCTC 10247]
gi|147746457|gb|EDK53534.1| putative membrane protein [Burkholderia mallei FMH]
gi|147751437|gb|EDK58504.1| putative membrane protein [Burkholderia mallei JHU]
gi|148029196|gb|EDK87101.1| putative membrane protein [Burkholderia mallei 2002721280]
gi|160696402|gb|EDP86372.1| putative membrane protein [Burkholderia mallei ATCC 10399]
gi|169651864|gb|EDS84557.1| putative membrane protein [Burkholderia pseudomallei S13]
gi|238525238|gb|EEP88666.1| putative membrane protein [Burkholderia mallei GB8 horse 4]
gi|243064027|gb|EES46213.1| putative membrane protein [Burkholderia mallei PRL-20]
Length = 356
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + + +G ++ ++ VL ++ R + +
Sbjct: 7 SSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 RWP------RGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 121 WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFS 248
V I + + P + + F
Sbjct: 181 DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAAELFGETLTPLQWAGGVAILAAVLWLVRAG 296
Score = 43.4 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|326791896|ref|YP_004309717.1| hypothetical protein Clole_2820 [Clostridium lentocellum DSM 5427]
gi|326542660|gb|ADZ84519.1| protein of unknown function DUF6 transmembrane [Clostridium
lentocellum DSM 5427]
Length = 292
Score = 82.3 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 86/297 (28%), Gaps = 9/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L++ A + + + + + ++ R +L F +
Sbjct: 2 NEKYKGILYILLAAFCFALMNTFVRLSGDLPSIQKSFFRNFVALLAAAFIL------KRS 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +L+ AT V YA+ S ++P + +FLK
Sbjct: 56 KIGFSFKKENFTLLLLRATCGTVGILCNFYAVDHLLLSDASMLNKMSPFFVIIFSYLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++N +Q +A + + L + S L + + A S G E
Sbjct: 116 EKVNWVQSLAVIGAFIGSLFIIKPSFSNLDLVPSLIGLLGGIGAGAAYTAVRSLGQRGEK 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKRAKLST 258
+ F + GL + + A
Sbjct: 176 GPFIVFFFSSFSCLVTLPFLIFQYHEMSLLQIGYLLFAGLAATGGQFAITAAYCYAPAKE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKTK 314
+ + +Y+ + + + Q D + + I+ A+ ++L + KN
Sbjct: 236 ISVYDYSQVIFAAILGFILFGQIPDLYSGLGYIIICGMAVFMFLYNMGYLTRKNPQA 292
>gi|254485665|ref|ZP_05098870.1| permease, DMT superfamily [Roseobacter sp. GAI101]
gi|214042534|gb|EEB83172.1| permease, DMT superfamily [Roseobacter sp. GAI101]
Length = 357
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 102/303 (33%), Gaps = 7/303 (2%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVL 61
+ + +K A ++ G + A+ ++ + L + S ++++ VL
Sbjct: 18 RATDMSQTNKVAEPTAALGSSLRGMVIGLAAFAVYATHDAAIKQLGETYSPVQIVFFVVL 77
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
S P V ++ S PK+ + + + V YA T
Sbjct: 78 LSFPVVTLMLI------SDKTAANLRPKSPFLTLVRTIAVVVGGFSAFYAFSVLPLAETY 131
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY 181
F +P++ L L E + + +A ++ +L +L++ L +A SA+
Sbjct: 132 AILFASPILITILSVPILGEVVRAHRWVAVVVGMLGVLVVLRPGTADLGIGHLAAFISAF 191
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
A + + G +L P + V + I D ++ +L
Sbjct: 192 GTALTAVVMRKIGGQERREVLLLYPLMANFVVMLCLLPFVYVPMPIADLGLVLAVSVLAV 251
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ A + V M+Y+ + + + D + + I++ + + +
Sbjct: 252 LAMTLMIRAYTLADAALVAPMQYSQIIWAALFGWLFFDETTDLMTFLGAFIIITSGIYIV 311
Query: 302 LPT 304
+
Sbjct: 312 VRE 314
>gi|88799415|ref|ZP_01114993.1| rarD protein [Reinekea sp. MED297]
gi|88777954|gb|EAR09151.1| rarD protein [Reinekea sp. MED297]
Length = 302
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 136/293 (46%), Gaps = 5/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M G ++ AY +WG PL+ L + ++V+S R++++ ++ +
Sbjct: 1 MKGLIYAVSAYAMWGCFPLFFSLLSHIDAMQVLSFRIVFACVFSAALLLLLGQ-FGAFRK 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+N + + ++ +++++W FI+A+ + TS YF+TP++S+FLG V LKE +
Sbjct: 60 LWRNRSTLLWSLLASVLISLNWYVFIWAVSQHRVVETSLGYFITPLVSLFLGRVLLKESI 119
Query: 144 NHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
NH Q A + + ++L + G+P +SL +A ++ Y RK P+ S G +E
Sbjct: 120 NHWQFAAGAIALAAILFELIALGGVPWVSLVLAFSFGFYGLVRKIQPIDSLFGLTMETLW 179
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ AL ++ G L + + + F + G +
Sbjct: 180 VLPLALLFLAGVAQQGQLQHDLPSWVLLVLSGVVTAIPLLFFAASVRALNLV---VAGFI 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y PL+ +++V+IL++ + + R + F +V IAM ++ V + + K
Sbjct: 237 MYLNPLMQFMTAVWILEEAVPSQRYVTFVMVWIAMACFITGLVRKQAELRRVK 289
>gi|328873551|gb|EGG21918.1| hypothetical protein DFA_01804 [Dictyostelium fasciculatum]
Length = 534
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 101/298 (33%), Gaps = 18/298 (6%)
Query: 29 FVFCAY-ILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
V + +++ + + + L+ + +++R+L + P ++ + ++
Sbjct: 28 LVLLSVQLVFSVFYILGKIALKSMHPFVFLTYRLLLATPIMWLFAFIAARD-QMMSLPKG 86
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + ++V + ++ F+ L + + P+ S +G V E+ L
Sbjct: 87 WREWILLIVVGILAVTINQSLFLVGLELSTASNAAITQPAIPIFSTLIGVVMGFEKKTAL 146
Query: 147 QIIAALLIILSLLIMT---------------LHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ I + ++ ++M L + L IA +
Sbjct: 147 KFIGIGVSVVGAVLMIDFTHLVSDTRTGTETLLGNLCFLGNTIAYSGFLISQRPLLKSGM 206
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + P + V G+ + + L L ++ F + ++ +
Sbjct: 207 SPAKVMAWAFLFGTPIVGIVGAAIVPHGQWAETNVMNWMVLLYTAILATAYTFWMSAWAV 266
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K++ +TV + PL + + +L + + + + ++++ + +
Sbjct: 267 KKSDATTVAVYLTIEPLATSIMAAIVLHERLTPLNYVGACVILVGVAAVMFSKHKEKK 324
>gi|254473524|ref|ZP_05086920.1| permease [Pseudovibrio sp. JE062]
gi|211957236|gb|EEA92440.1| permease [Pseudovibrio sp. JE062]
Length = 324
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 100/309 (32%), Gaps = 16/309 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
+ ++S + G LF+ L + ++L +S +EV R L V V+
Sbjct: 8 TDSHSSNAGLHGILFMVAGMSLAPLMDGTAKYLSSFISPVEVSLGRFLCQALIVLLIAVF 67
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + + + LA+ FF +L +FV P+I
Sbjct: 68 MGRSFGSLMKEVNRIQLIR-----GACLAICSIFFFSSLKYMPLADAIAIFFVQPMILTV 122
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L +V LKE++ + A ++ ++ LI+ L ++ +A FA +
Sbjct: 123 LSAVVLKEKVGVRRWSAVVVGMVGALIIIRPGSSALGWPSLLPLAAATSFAAYLVLTRKL 182
Query: 194 EG---------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
G VL + L + + ++ + G+++
Sbjct: 183 SGSASLLGIQFTTGVAGVLTLTPLVIIASLFGFEAAAWTTPDLTHLPLFVLMGIISFASH 242
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
RA S + + YT + + + D + ++ +Y+
Sbjct: 243 GCIVLAFDRAPASVLAPLSYTEIISATIVGFVLFGDIPDMFVWLGVALIASG-GLYIAHR 301
Query: 305 VINSGKNKT 313
+ K +
Sbjct: 302 ERTAAKRQA 310
>gi|153836366|ref|ZP_01989033.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ3810]
gi|260877553|ref|ZP_05889908.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AN-5034]
gi|260897505|ref|ZP_05906001.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus Peru-466]
gi|260901708|ref|ZP_05910103.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ4037]
gi|308125889|ref|ZP_05778026.2| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus K5030]
gi|149750268|gb|EDM61013.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ3810]
gi|308087092|gb|EFO36787.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus Peru-466]
gi|308090775|gb|EFO40470.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AN-5034]
gi|308108887|gb|EFO46427.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ4037]
gi|308114286|gb|EFO51826.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus K5030]
gi|328470551|gb|EGF41462.1| hypothetical protein VP10329_07122 [Vibrio parahaemolyticus 10329]
Length = 301
Score = 82.3 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 96/300 (32%), Gaps = 16/300 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + +G F+ + + + + L + V E+++ R L SL + +
Sbjct: 2 SNSLNTMVPIGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDV-- 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
K +L+ + Y++ T + ++ PV +
Sbjct: 60 ------KRKRISVWGNNKPLLLARGAVGTFALMCVYYSVTTLPLAEATIFQYIHPVFTAL 113
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKT 187
L +FLKER+ I L +L + +M + + + A+ +
Sbjct: 114 LAVIFLKERIQPTTFICIALCLLGVYVMVRPETGVESAQTLPMFSVMIAILGAFGSSIAY 173
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ V ++ L + + G++F + ++ T L+ G+
Sbjct: 174 VIVRKLSQTEDSSVIIFYFPLVALPTSILFMGDNFVMPDLYLTCMLVLVGVFTQIGQLGL 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ + Y + ++ + + I ++V ++ + +
Sbjct: 234 TKAMQTQQAGKASAYSYVQIVFSVLLGIVFFGELPSLWTYIGGALIVAGALINVFGHHLR 293
>gi|187478381|ref|YP_786405.1| membrane protein [Bordetella avium 197N]
gi|115422967|emb|CAJ49497.1| putative membrane protein [Bordetella avium 197N]
Length = 296
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 7/290 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V ++ ++L + S ++++ R L ++P V V G +L
Sbjct: 13 SPLTGIACVIAGIFCLTLSDAQAKWLGDHYSPIQILFLRSLIAMPFVLALAVGLGGRPAL 72
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + + I V F L + F P+ L + LK
Sbjct: 73 RTQHL------NVHLLRGAINVVSASCFYLGLRYLPLAENTAIAFAAPLFVTALSVLILK 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ + +A ++I+ A+ +A +A I + +
Sbjct: 127 EKVDARRWLAVGAGFAGVVIIVRPGSASFQLAALLPLITALLYALMMITARAIGKGEGML 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ L +V + + D +G L ++ + + G + S V
Sbjct: 187 TTMFYIVLGQLVASAVLIPWFWDTPRTQDLPLFVGVALFSTLGLTLITQGFRIGPASAVA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+YT L + I ++ + I + + + +
Sbjct: 247 PFDYTGLLWATLLGWLIWRETPELSAAIGALFIAGSGLYIAWVETRRRTR 296
>gi|302338004|ref|YP_003803210.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
gi|301635189|gb|ADK80616.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
Length = 289
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 95/295 (32%), Gaps = 6/295 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S + ++G + + + + ++ + V V E + R L + + +
Sbjct: 1 MSSDKRENRPLLGAALMTASAASFALMGAAVKYAQGVPVFEKVLFRNLI-ILFIAVVSLA 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + A + + YAL + +P F
Sbjct: 60 SRRISPWGEAEDRTKLFLR-----ALLGYIGVVCTFYALGKLPLADANLLNKTSPFFVTF 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++FL ERL + I A + ++ +++ A SA V S
Sbjct: 115 FAAIFLHERLRRIHIPALIAAMIGAVLIIKPGFDVNAFPAFIGFLSAIFAGAAYTLVRSL 174
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
M ++ +L V+ + F + N P + L+ GL + + +
Sbjct: 175 NAREDPMVIIFYFSLLSVLVSLPLAMRGFVVPNPPLLVALVATGLFGAGGQFFITLSYRY 234
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + + I Y++ + ++ ++ D +++ A + +
Sbjct: 235 GKAADISIFNYSSVIFSLLIGYIGWRELPDWFSLTGALLILGAAGLVYFTARRDR 289
>gi|291459253|ref|ZP_06598643.1| integral membrane domain protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418507|gb|EFE92226.1| integral membrane domain protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 289
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 90/292 (30%), Gaps = 8/292 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G LF+ A + + ++ + ++ V+E R + + + + L K
Sbjct: 4 QKRGILFIVLAAAGFSLMAVFVRLSGKLPVMEKAFFRNIVAALAAWIILKRSGERFHLEK 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + +A+ + ++P ++ + LKE
Sbjct: 64 REWLPLFLRSLF------GTIGLIANFWAIDRLGIADAAMLNKMSPFFAILMSLFILKET 117
Query: 143 LNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I+ + + ++ G+ L + + + T +
Sbjct: 118 PGRRDILCLITALFGAALVIKPGVGLAQLPALVGLLGGFFAGTAYTYVRKLGKSGVKGPI 177
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ ++F F LFL+ G + + + A + +
Sbjct: 178 IVLAFSVFSCAACLPFLIMDFHPMTGRQLLFLLLAGAAATLGQLGITAAYRFAPAKEISV 237
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+Y+ + + F+ + D V + + +++ +Y ++G ++
Sbjct: 238 FDYSQVVFAAIFGFFLFGELPDAVSLLGYFLII-GTALYRWRAARSAGSERS 288
>gi|170702344|ref|ZP_02893238.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria IOP40-10]
gi|170132757|gb|EDT01191.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria IOP40-10]
Length = 309
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 93/290 (32%), Gaps = 16/290 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S P + G L+V + +G ++ ++ V VL ++ R + +
Sbjct: 7 SSSPALQGALYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAILAAIARHRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ V ++ A + AL Q L + ++ P L +
Sbjct: 67 AWP------RGRTLVPLVAMGALGYLGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A +L + +M L +A+A+ + ++ G
Sbjct: 121 WWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALASAVIYSLYIVGGTKATRGV 180
Query: 197 FIEMCVLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I A+ V F + L + F
Sbjct: 181 DPLATTAIICLSATATLVAIAIVRTAAFGVPPRWPATAAGWASMLAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G++R + ++ P++ + + + + + ++ ++ A++
Sbjct: 241 AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVL 290
Score = 38.7 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%)
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + L + ++ A+ S V ++ Y P + + + +
Sbjct: 63 HRRVAWPRGRTLVPLVAMGALGYLGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWW 122
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPT 304
L + + + + + V + +
Sbjct: 123 LGERLTRAKAVALVLCVAGSALMVGGG 149
>gi|254190654|ref|ZP_04897161.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237]
gi|157938329|gb|EDO93999.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237]
Length = 356
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + + +G ++ ++ VL ++ R + +
Sbjct: 7 SSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 RWP------RGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 121 WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFS 248
V I + + P + + F
Sbjct: 181 DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAAELFGETLTPLQWAGGVAILAAVLWLVRAG 296
Score = 43.4 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|28210686|ref|NP_781630.1| membrane spanning protein [Clostridium tetani E88]
gi|28203124|gb|AAO35567.1| membrane spanning protein [Clostridium tetani E88]
Length = 301
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 84/292 (28%), Gaps = 4/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
ILWG++ L + + ++ + +R L + +F +
Sbjct: 2 KDVKKAHFLAIILMILWGMSYLSIKVVVHEIHPVLSAFYRFLIAAIILFIYLKVRYPEEK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+LK+ G + L ++ + ++S F +
Sbjct: 62 VLKEDKIKMALGGFFGVAMYFLFENYAVYFTTASNVAIIISSIPIFTLISQRIIFKEKIN 121
Query: 140 KERLNHLQIIAALLIILSLL---IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + + I+ L + G + I + + +
Sbjct: 122 VVKAIGASLSIIGIGIILLSKGKVSLFSKGTIGDLMGIGAALCWVAYTVVISKLKGNYRS 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ I ++ + F L + I+ Y +
Sbjct: 182 IVITTYQTIWGCIFLSPSIFIFQHSIMPSTKAIANLLYLSFFCTCIGYAIYIYCQNKLGA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ I+S+ +L + I++ + + I++I + + IN
Sbjct: 242 TVITTYINLQPIVSIISAKILLNENINSKQILGSAIIIIGLFLASKSEKINK 293
>gi|218262449|ref|ZP_03476915.1| hypothetical protein PRABACTJOHN_02593 [Parabacteroides johnsonii
DSM 18315]
gi|218223379|gb|EEC96029.1| hypothetical protein PRABACTJOHN_02593 [Parabacteroides johnsonii
DSM 18315]
Length = 312
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 102/296 (34%), Gaps = 3/296 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G A +G PL+ L + + V+ R L+++P + I +
Sbjct: 4 KVKGYFLGAIAAATYGTNPLFALPLYKDGMDPDSVLFFRYLFAIPILGMMIKGRGRSFKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +G+LV +++ ++ + + VF + L+
Sbjct: 64 ERKAVAPLIVMGLLVAFSSLALFQSYNYMEVGIASTLLFVYPIMVALIMALVFKEKLTLQ 123
Query: 141 ERLNHLQIIAALLIIL-SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
L +A + ++ S TL+ LL +A A++++ Y + + +
Sbjct: 124 TVFCILLALAGIGLLYKSSDGTTLNLTGVLLVMASALSYAIYIIGVNQSTLKTVATLPLT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L ++V GF + + + F + ++ +
Sbjct: 184 FYILLFGVSLFLVRVGFGKDLYIVDKWYLWGNLIALAVFPTAISFLCTTSAVQYIGSTPT 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ P+ + V + + + ++++A+ + + + I S + +K
Sbjct: 244 AILGALEPVTAVFFGVAVFGEALTPRIGCGILLIILAVTIIIAGSNITSHLIRFRK 299
>gi|166033291|ref|ZP_02236120.1| hypothetical protein DORFOR_03017 [Dorea formicigenerans ATCC
27755]
gi|166027648|gb|EDR46405.1| hypothetical protein DORFOR_03017 [Dorea formicigenerans ATCC
27755]
Length = 297
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 72/288 (25%), Gaps = 4/288 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++WG + ++ + R + I +
Sbjct: 7 VMLLLTSLIWGTAFVAQSVGMDFLGPFTFNGVRSFIGGVTLLPCIWLLEKMNGKPEVDGT 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK---ERL 143
+ + +L + F V LG K ++
Sbjct: 67 RKDLIQGGIACGLLLFAASSLQQMGIQYTTAGKAGFITAFYIVFVPVLGIFLKKAAGWKV 126
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+A + + + G + + A +G +
Sbjct: 127 WMSVFLALIGLYFLCIKEGFSIGKGDIMIFACALVFAVHILVIDYYSPKVDGVKMSCIQF 186
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + + + + L + + + G K A + ++
Sbjct: 187 FVCGIASLPFMFLTETPQIGNILDARMPILYAGVMSCGVAYTLQILGQKHANPAIASLLL 246
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++S IL + + I ++ +A+++ LP KN
Sbjct: 247 SMESCFSVLSGWIILGETLSAREGIGCVLMFVAIILAQLPDKREKLKN 294
>gi|329961645|ref|ZP_08299704.1| putative membrane protein [Bacteroides fluxus YIT 12057]
gi|328531637|gb|EGF58471.1| putative membrane protein [Bacteroides fluxus YIT 12057]
Length = 302
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 89/302 (29%), Gaps = 7/302 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G ++ + +G+ P +T L S EV+++R + + +
Sbjct: 1 MQNNQIKGYIYAALSSSTFGLAPFFTISLLTAGFSSFEVLAYRWGIASLSLALFGMMLKE 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L + + V I + + ++ + G
Sbjct: 61 TFRIGRKDWGAVFLLSLLRAATSFSLVIAYQHIASGVASTIHFMYPLAVALAMMLL-FGE 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA----VTWSAYCFARKTIPVGS 192
L + I +LS M ++G + + A ++ Y +
Sbjct: 120 KKSFSVLFAVSISLIGAGLLSSGEMNGNNGNSTIGMTAAILSLFFYAGYIIGVRKSRATH 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ V+ + ALF+++ +GG L + IK
Sbjct: 180 IPSTALTCYVMGLGALFFIIGGFLTGGIRLATDGHTWLNILGLALPATAISNITLVKAIK 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ I PL + + + I +++ A+ + ++ +
Sbjct: 240 HVGPTLTSIFGALEPLTAVAIGYSVFHESFTPASAIGIVLILTAVTIVVMHEKKTHRQRT 299
Query: 313 TK 314
+
Sbjct: 300 AR 301
>gi|260426248|ref|ZP_05780227.1| permeases of the drug/metabolite transporter [Citreicella sp. SE45]
gi|260420740|gb|EEX13991.1| permeases of the drug/metabolite transporter [Citreicella sp. SE45]
Length = 325
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 81/269 (30%), Gaps = 7/269 (2%)
Query: 41 PLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
+ +FL + +++ VL+S P V ++ P
Sbjct: 22 DVVVKFLGGSYAPFQIVFFSVLFSFPLVSLMLI------RDTTPGHLRPIHPWWTALRTV 75
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
+ YA T F P++ L L ER+ + IA L+ + ++
Sbjct: 76 SAVITGICVFYAFSVLPLAQTYAILFAQPLVITVLAIPILGERVRLRRWIAVLVGLAGVI 135
Query: 160 IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
++ G L A A A I V + +L P L V +
Sbjct: 136 VVLRPGGTELTLGHAAALVGACTGALAAIVVRKIGHEERSVVLLLYPMLTNFVIMACALP 195
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
+ I + +L + + + V M+Y+ L +
Sbjct: 196 FVYQPMPIEHLGAVGVMAVLAITGGFVLIGAYRNGEAVIVAPMQYSQLLWATLYGALFFD 255
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ D + +++ + V +L ++
Sbjct: 256 EWPDAMTLAGAVLIIGSGVYIVLRESRST 284
>gi|239827210|ref|YP_002949834.1| hypothetical protein GWCH70_1828 [Geobacillus sp. WCH70]
gi|239807503|gb|ACS24568.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
WCH70]
Length = 310
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 92/296 (31%), Gaps = 10/296 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G + A +WG + +++ L+ V ++ R + +F + F +
Sbjct: 2 KNTFFGAFCLSLAASIWGGMYVVSKYVLDFVPPFTLVWLRYAIAFVVLFGILK-FHQYKT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +++ + + V + TP V L
Sbjct: 61 KTRISIRKQDWLLLGWIGFIGYFVSISLQFIGTKLSDAHTGALITSATPAFIVLFAKFIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + ++IA LL + ++I+ G +L A + +
Sbjct: 121 NESVTLRKVIALLLATIGVVIVIGFDNSGGQSFWGNMMLVGAALTWALLSVYVKVASTRF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S+ + A+ V+ + F I + + F +++ G+
Sbjct: 181 SALTITTYAILFALLFTTPVMLWELNEQPVSFPNMIVIFGIFYLGIISTAGAFFLWNKGM 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + PL+ V L + I + +++I + + ++ +
Sbjct: 241 EMMDAGIGSLFFFFQPLVGAVFGFLFLHEQITASFYLGGLLIIIGVFIAVMSPIHQ 296
>gi|298242615|ref|ZP_06966422.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297555669|gb|EFH89533.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 326
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 90/296 (30%), Gaps = 13/296 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +LW + L S +I R L + + + +
Sbjct: 22 LVALSLTLVLWASAFAGIRAGLTGYSAGALILLRFLIASGALLIYALVTRMRMPD----- 76
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
M++ + V+ Y + P +V L +VFL E +
Sbjct: 77 -RRDIPAMILLGFIGITVYQLGLTYGETSVSAGTAGLLIATVPCFTVILATVFLGEHFSV 135
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIE 199
+ L+ + +++L+ L +A + F + + G +
Sbjct: 136 WGWVGLLVSFTGVTLISLNGNGGLHFTPGALLILLASFSESVYFVVQKRYLRKYSGLELA 195
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L LF +++ E + + ++++ + R S
Sbjct: 196 TYNLWGGTLFMLIFLPTLWQELPHAPLGATLAIVFLGLFPAAVANLVWTFALSRTSASAA 255
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+P+ ++ + L++ + +V++ +++ L ++ + +
Sbjct: 256 ISFLNISPVFSLIIAWLWLREVPSALALGGGLVVILGVLLINLKGKVSVRAEQPAE 311
>gi|284989073|ref|YP_003407627.1| hypothetical protein Gobs_0474 [Geodermatophilus obscurus DSM
43160]
gi|284062318|gb|ADB73256.1| protein of unknown function DUF6 transmembrane [Geodermatophilus
obscurus DSM 43160]
Length = 318
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 92/294 (31%), Gaps = 11/294 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFA 70
+ + + G V A + WG + + + + L++ HR+ +
Sbjct: 1 MPTPSTTSAASRGFPLVVLAALCWGTAGVSGRIVSERTDLGPLDIAWHRMAVGAVVLLAG 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + + LV + LAV+ + A+ T + + +
Sbjct: 61 YLLTRHREPVTVPLTRPVAVRLGLVSAG--LAVYQLAYFAAVATAGVSVATLVALGLAPL 118
Query: 131 SVFLGS------VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA 184
+ LG + L + L++L L +G +L A+ SA +A
Sbjct: 119 LIALGGAALGSGRPDRATFAALVVALVGLVLLVGLTAGASAGTAVLLGALLACGSALGYA 178
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
T+ G V + + G + L + ++ +
Sbjct: 179 VVTLAGGDVPAGLPVTLVGFAGGALLLTPVALTAGLSLTTEPVALATLLYLGAVPSAAAY 238
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+F G++ + GI+ P+ V + L + + +V+ A+
Sbjct: 239 ALFFRGLQTVPGAVAGIVTLLEPVTATVLATVFLGERLPLGALAGGLLVLAAVA 292
>gi|288869999|ref|ZP_06409590.1| integral membrane protein [Clostridium hathewayi DSM 13479]
gi|288868867|gb|EFD01166.1| integral membrane protein [Clostridium hathewayi DSM 13479]
Length = 312
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 90/298 (30%), Gaps = 4/298 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAI 71
+ + + T G +F + +++G TP+ + + + R SLP +F +
Sbjct: 15 MKELTQANQTYKGIIFTAVSAVIFGFTPVLARISYDGGANGITMTFLRCFLSLPVLFLIL 74
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYAL-LTRQGFLTSFSYFVTPVI 130
L + K G+ AT + ++ + + + +
Sbjct: 75 KIKGIPLRVEKAWRMPVSVCGVFGAFATTVTLYMSYSYIPVGMATTLHFVYPVLVTVGCV 134
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+F + +K+ L L A L+ L SG + ++ + +
Sbjct: 135 LIFKEGITVKKVLALLCGAAGTLLFLENFSAGSGSGAGIFLALLSGLFYSVHMIVMDKSG 194
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
+ +F L + G G+ F L S
Sbjct: 195 IKNMYYFKLSFYLCLFGAVLSGIYGGVTGQLTLHLTGQAWFFAFLVSLCTSVGAISLFQL 254
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI+ I+ P+ ++ V +L + T + ++ ++V+
Sbjct: 255 GIRYTGAVAAAILSTLEPITSVILGVLVLGELFTTRKIAGCVCILFSVVLIAAAGKKR 312
>gi|77464225|ref|YP_353729.1| DMT family permease [Rhodobacter sphaeroides 2.4.1]
gi|77388643|gb|ABA79828.1| possible transporter, DMT superfamily [Rhodobacter sphaeroides
2.4.1]
Length = 303
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 92/294 (31%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T+ G L++ + + + G+T + + + R + + +V
Sbjct: 8 PSRTRTLEGVLWMLASGVSFVGVTGIVRYLGTDIPAAQGAFLRFAFGALFLLPTLV---- 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + YA+ + ++ PV+ +
Sbjct: 64 ---PVLRQGVPMSTLKLYGLRGAFHTAAVICWFYAMARIPVAEVTAIGYLNPVLVTVGAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+F ERL +I+A + ++ LI+ L + ++ +A FA +
Sbjct: 121 LFFSERLALRRILAVAVALVGALIVLRPGLRELSAGHLSQLCAATLFAGSYLLARRLSDV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++A+ + + + + L+L + + + A L
Sbjct: 181 AGAGAIVAMMSATVTLGLLPFALLVWVPVGVDQLLWLALVAVFATAGHYCMTRAFGAAPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + L + + +D + GI++ A+ + +
Sbjct: 241 TVTQPVTFLQLLWATLLGALAFGERVDPFVLLGGGIIISAISYITWRESVLKRR 294
>gi|323496756|ref|ZP_08101801.1| transporter, drug/metabolite exporter family protein [Vibrio
sinaloensis DSM 21326]
gi|323318181|gb|EGA71147.1| transporter, drug/metabolite exporter family protein [Vibrio
sinaloensis DSM 21326]
Length = 299
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 102/303 (33%), Gaps = 16/303 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF 74
+A+ +G F+ + + + + +++ + V E+++ R L SL + I
Sbjct: 3 SSATTTIPVGVRFMLLSALGFALMSACVKYVSEHGIPVFEIVAARALVSLIISYLDI--- 59
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
K +L+ ++ V Y++ T + +V PV + L
Sbjct: 60 -----KRKRLSVWGNNKPLLMLRGSVGTVALMCVYYSVTTLPLAEATILQYVHPVFTALL 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC------FARKTI 188
G +FLKER+ +I L + L +M S + + + +
Sbjct: 115 GVLFLKERIQGATMICIALCLAGLGLMVQPSMAQGSGHELPLFSVMMALLGALGSSIAYV 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V ++ L + + F + F + ++ TL L+ G+ +
Sbjct: 175 VVRKLSQTEDSSVIIFYFPLVALPTSVFLMWQDFVMPSLYLTLMLVLVGVFTQIGQYGLT 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ Y + + V+I + + G++V ++ + +
Sbjct: 235 KAMQTQAAGKASAYSYVQIVFSTLIGVWIFNEIPSIWTYLGGGLIVTGALINVFGKKLIP 294
Query: 309 GKN 311
K
Sbjct: 295 SKR 297
>gi|288556775|ref|YP_003428710.1| drug/metabolite transporter (DMT) superfamily permease [Bacillus
pseudofirmus OF4]
gi|288547935|gb|ADC51818.1| Permeases of the drug/metabolite DMT superfamily [Bacillus
pseudofirmus OF4]
Length = 304
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/305 (14%), Positives = 94/305 (30%), Gaps = 14/305 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L+ LWGI L+ Q L + E+++ R ++S + ++ + +
Sbjct: 1 MSVKQAYLYAVLGAALWGIIGLFVQPLYSYGFTAWEIVAIRAIFSALLLVGYLIITNRKM 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + F + L + P L +F
Sbjct: 61 LRIHI----RDLPLFIGTGIISIVFFNWCFFTVIDQSNLSLAVVLLYTGPFFVTLLSRIF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIPV 190
KE L ++ A +L I+ + LL + + A +
Sbjct: 117 FKEWLTPNKVTALVLTIIGCAFVVGLLPSFNTVITPYILLVGIGSGFFYALYSIFAKVSS 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I A+F + +G H F L + +++ G
Sbjct: 177 KRYSSMTITTYSFICAAMFMIPTSGLWNKAHLFAQIDVVGYGLGLAFFPTVLAYLLYTRG 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + S I+ P++ I I K + ++ +V+ ++ + P S K
Sbjct: 237 LAEIESSRASILSTIEPVVAIGIGFLIFKDQLSLIQWFGVALVLFSIFLVSKPDKARSIK 296
Query: 311 NKTKK 315
+T K
Sbjct: 297 KQTPK 301
>gi|153010907|ref|YP_001372121.1| hypothetical protein Oant_3586 [Ochrobactrum anthropi ATCC 49188]
gi|151562795|gb|ABS16292.1| protein of unknown function DUF6 transmembrane [Ochrobactrum
anthropi ATCC 49188]
Length = 299
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 108/302 (35%), Gaps = 7/302 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ + + + G Y + + ++L V +++ R L + + ++
Sbjct: 1 MVTGSVNSRPLAGIALACGGYACFALQDAMVKWLVATYQVPQILFMRSLV-IVVITGVLI 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ S+ + +N + + L + + + YF P++ +
Sbjct: 60 RYRRHPSIFRSPYRNTIVLRAALMLGAWLLFYNA-----ARHLELAELTTLYFSAPIMVM 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
FL + LKE++ + IA + + + + + P L A + +C+A TI V
Sbjct: 115 FLSILVLKEKIGPGRWIACAVGFVGVTVAANPTHSPNLIPAAMCIVAGFCWAWSTILVRL 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
M + L + + S + ++ L +I GL+++ + G +
Sbjct: 175 VSRSETTMTQMYATGLLFGLACALSFPWTWQDPDLSGWLLMISLGLVSTLGQFLLYEGFR 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A S + +EY+ + + I + ++V+A ++ + + K
Sbjct: 235 HAPASALAPVEYSGLIWAFIYGYLIWAEVPAANVFAGAFLIVLASLLLIAWEQRQANLRK 294
Query: 313 TK 314
+
Sbjct: 295 RR 296
>gi|257469187|ref|ZP_05633281.1| RhaT [Fusobacterium ulcerans ATCC 49185]
gi|317063435|ref|ZP_07927920.1| membrane protein [Fusobacterium ulcerans ATCC 49185]
gi|313689111|gb|EFS25946.1| membrane protein [Fusobacterium ulcerans ATCC 49185]
Length = 287
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 100/280 (35%), Gaps = 9/280 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A +L+GI+ L+ +FL Q + ++ RV +S +F + L L K+ K +
Sbjct: 13 IAVLLFGISGLFGKFLTQ-PSIIIVLGRVFFSSIFLFVGLTITKENLKL-----KSRKDM 66
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
++ F +LA+HW F + + ++ P+ F+ F E+L II A
Sbjct: 67 LIIAFMGIVLAIHWSSFFQGIKLSTVAIGLLTFSTFPIFVTFMEPFFFGEKLKKEDIILA 126
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAV---TWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ ++ + + A+ S + + + + +
Sbjct: 127 FITFAGVMFVIPDFHMGNEMTVGAMYGILSSLSYAVLSILNRKYVKEYKGVVIAFYEQLV 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+V F L ++ + +F +K K T GI+ PL
Sbjct: 187 SLIVLLPFFFIMEPVFTRKDIFLLILLGTVFTGITHTLFINSLKDIKTQTAGIISSLEPL 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ S+F+L + +++ + + + N
Sbjct: 247 YGIILSIFLLNEVPSVKEIAGGLLILGTVFYSTIKNLKNK 286
>gi|90420835|ref|ZP_01228740.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334810|gb|EAS48582.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 330
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/308 (16%), Positives = 102/308 (33%), Gaps = 14/308 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ AS M+G + + +++ + E + E++ R ++L V + +
Sbjct: 21 DAASPNPMLGIMLKCISVVVFVGMQTSIKAGAEGIPAGEIVFFRSFFALVPVVIYLAWLG 80
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ L T I GF +AL + P+++V
Sbjct: 81 DLRTALTTTHLGGHVWR-----GVIGVTSMGFGFFALTRLPYPEWITITYGAPLLTVVFA 135
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKT 187
++FLKE + + A L+ ++ ++++TL A SA A
Sbjct: 136 AIFLKEVVWLYRWSAVLVGLIGIMVVTLPKLSLGSDGLADGEAIGIAAAMVSATVAAIAM 195
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I + ++ +L S + + FLI GL +
Sbjct: 196 IQIRRLVHTEKTATIVIYFSLTSSALAALSIFFGWVVPTWEQAGFLILAGLCGGVGQLLL 255
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + A ST+ EYT+ +L I+ I + + IVV A + +
Sbjct: 256 TACYRYADTSTIAPFEYTSLILAIIIGYVIFDEAASGTTILGGAIVVSAGIFIIWREHRL 315
Query: 308 SGKNKTKK 315
+ +
Sbjct: 316 GLERSRAR 323
>gi|289665270|ref|ZP_06486851.1| integral membrane protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 303
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 97/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
A+ + L++ + +G+ + + ++ E+ R + L + IV
Sbjct: 3 TAAQVSRRAALWMLTSTFAFGLMAITIRLASSTIATTEIAFFRNAFGLLALLPLIVRPGK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 63 PLPRTRQLP-------HYLARTLIGLASMLCGFWAIGHLPLSQAISLSYATPLFVTVLAV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E++ + +A + +L++ + +A A I +
Sbjct: 116 IWLHEQVRLRRWLAVAAGFIGVLVILRPGSSTFTPSLLIALLAAMISAVVAIQIKQLSRS 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + D L+L+ G+ + ++ +K ++
Sbjct: 176 DDSDAVVFYTYVFWVPMSLIPALFQWTWPQGIDWLWLVATGIFGTAGQLFWTRALKLGEV 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + + + L+ + ++ + I+ I I++ A V + + +
Sbjct: 236 SALQPISFMQLPLVALLGWWLFGEAIERHTVIGAAIIIGANVYIAHRETVLARR 289
>gi|320333400|ref|YP_004170111.1| hypothetical protein Deima_0791 [Deinococcus maricopensis DSM
21211]
gi|319754689|gb|ADV66446.1| protein of unknown function DUF6 transmembrane [Deinococcus
maricopensis DSM 21211]
Length = 309
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 95/298 (31%), Gaps = 15/298 (5%)
Query: 14 LSKENASLPTM--MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFA 70
+S A + + + + W + LE S + +R LW+ +
Sbjct: 1 MSSSPARPERLDALSFGAIIVTILFWASAFAGIRAGLESFSAGHLTLYRFLWASLALGIY 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
D L+ + + ++ F Y ++ S PVI
Sbjct: 61 AAVARIPFPPRADALRILGLSFIG------ITLYHTFLNYGEISVPAGTASLIIAAGPVI 114
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFA 184
+ L + F ERLN + ++ L+ + + ++ L G + A+ +A F
Sbjct: 115 TALLATAFGGERLNAVGWLSTLISLSGVALIVLGKGESVNFTTGALLILGSAVCTATYFV 174
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + F + L + + +V+ GE + +
Sbjct: 175 FQKPLLRRMPPFHFTVWSLILGTVPMLVFLPGFAGELARAPLGAHLAVAYIGVFPAALAY 234
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+++ + R S Y +P+ I+ + L + + + + +++ L
Sbjct: 235 LTWTFALSRVPASVTTSFLYVSPVFAILIAWVWLHEAPTARSLLGGAVAIAGVILLNL 292
>gi|319794674|ref|YP_004156314.1| hypothetical protein Varpa_4031 [Variovorax paradoxus EPS]
gi|315597137|gb|ADU38203.1| protein of unknown function DUF6 transmembrane [Variovorax
paradoxus EPS]
Length = 309
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 78/302 (25%), Gaps = 17/302 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + A + G T + ++ + + + R +LP +
Sbjct: 2 SERIKGMVLCALAMVTVGSTVVASKVIAGGLPPFTATALRFAMALPVFLLLLRVTRTPWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
V +L + + I + P ++ + + L
Sbjct: 62 RPD----RRDLVLLLCQAGLGSVGYTVLLILGVRWAPAASAGVVAGTLPAVAALVAVLAL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------------IAVTWSAYCFARKT 187
+ER + + +L +L ++ AV A
Sbjct: 118 RERPGRYLVGSIVLATAGVLAISWPGEGAAGDSKSPAALLGNLLVLGAVVCEAMFILLNK 177
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + A L +V F L N + F ++
Sbjct: 178 RLRVPVRPLALSALMTAFGLLLSLVPALFERAWERPLPNDALVGVAYYALVPTVLGFVLW 237
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G R K + + P+ ++ + L + I + V+ A+ + L
Sbjct: 238 FAGSARLKGAEAALFTALLPVSALILAALWLGESISLAQIGGAACVLGAVGLASLDGRGG 297
Query: 308 SG 309
Sbjct: 298 KR 299
>gi|39998479|ref|NP_954430.1| hypothetical protein GSU3390 [Geobacter sulfurreducens PCA]
gi|39985426|gb|AAR36780.1| membrane protein, putative [Geobacter sulfurreducens PCA]
Length = 302
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/306 (11%), Positives = 99/306 (32%), Gaps = 12/306 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ S P + L V + L+ + L L + ++R+L++ + A
Sbjct: 1 MTTTPQSRPIINPYLAVLVGVFAVSFSALFVR-LTTAPPLIIATYRLLFTFLLLAPATAA 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + S LA+H+ + +L + + PV V
Sbjct: 60 SR----FSGVRSMSRREIALSAASGVFLALHFVTWFTSLFYTSVASSVVIVTMQPVFVVV 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARK 186
+F +E++ L ++ ++ + +++ + + + +
Sbjct: 116 GAWLFFREKVPRLALLGGVVALCGSIVIGAGDFQLGMRAFVGDLLALAAAVFVSGYLLIG 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
G+ E +L V + S + LF + +
Sbjct: 176 RKLRGNVELSGYTFVTYGASSLVLVSASFLSRTPCHPYPPLDWLLFFALAAVCTVLGHTV 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F++ ++ + S V + P+ IV + L + + ++ + ++ +
Sbjct: 236 FNWVLRYVQASVVSVSILGEPIGAIVWASLFLGESPTLRQVAGGSLIFAGLYIFTRVSAR 295
Query: 307 NSGKNK 312
N+ +
Sbjct: 296 NTVGRR 301
>gi|260462365|ref|ZP_05810573.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259031859|gb|EEW33127.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 321
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 98/307 (31%), Gaps = 16/307 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T+ G + ++ + +V +++ R +++ + + + +
Sbjct: 15 HDTLRGIALKIVSVAVFVGMQTCIKAAGEVPAGQIVFFRSFFAIFPIIAFLAFKGQLPTA 74
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
V + G +AL + P++ V SVFL
Sbjct: 75 FVTK-----RPFNHVARGIVGVGAMGLGFFALTRLPLPEAITLNYAQPLLVVVFSSVFLG 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A + ++ +LI++ + +A +A A + V
Sbjct: 130 ETIRVYRWSAVAVGLVGVLIISWPELTLLNSDEALDDQEVLGVMAALVAAAISAVAMLLV 189
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ ++ + V + + + + LI G + +
Sbjct: 190 RNLVQTERTATIVLWFSSTASVLSLLTLPFGWQSLTLVQAALLIMAGFCGGLGQILMTSA 249
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV-INSG 309
+ A+ S V EYT+ +L +V F+ + IV+ A + + +
Sbjct: 250 YRHAEASVVAPFEYTSMILGVVVGYFVFGDVTSLSTLVGGVIVIAAGIFIIWRERQLGLE 309
Query: 310 KNKTKKS 316
+ +T+K+
Sbjct: 310 RTRTRKA 316
>gi|146301137|ref|YP_001195728.1| hypothetical protein Fjoh_3395 [Flavobacterium johnsoniae UW101]
gi|146155555|gb|ABQ06409.1| protein of unknown function DUF6, transmembrane [Flavobacterium
johnsoniae UW101]
Length = 305
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/298 (17%), Positives = 107/298 (35%), Gaps = 9/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG--- 77
+ T + AY WG L + + + L+++ +RV + F
Sbjct: 1 MKTTKYYIAAITAYTTWGFFSLVLRPIHEYPALDILFYRVFSCSILMLLITFLFKRKAFQ 60
Query: 78 ----LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + KAV + + + L +W FIY + TS +Y V P+++
Sbjct: 61 ETIAIFKSLSDSEKKKAVLLNIGGSFFLMANWFTFIYVMNHVSVKATSLAYLVCPILTTL 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L LKE+L Q +A L IL L+++ + + I A + + G
Sbjct: 121 LAFFILKEKLAKTQWLAVGLSILGCLLLSYADIMDMFFSIIIGLTYACYLVSQRVNKGFD 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + L + + +SG + Y +
Sbjct: 181 RFIVLTFHITLAAILLFPFYPEYSGPIPTEF--KFYFCIETIAIAFTIIPLFLNLYALSG 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
STVG++ P++ + + F+ + I ++ +GI+ IA++V+ + +
Sbjct: 239 INSSTVGMLLNVNPMIAFLLANFVYHEKISALQISAYGIIFIAVLVFNSHHIFAIKQK 296
>gi|167767321|ref|ZP_02439374.1| hypothetical protein CLOSS21_01840 [Clostridium sp. SS2/1]
gi|167711296|gb|EDS21875.1| hypothetical protein CLOSS21_01840 [Clostridium sp. SS2/1]
gi|291559373|emb|CBL38173.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[butyrate-producing bacterium SSC/2]
Length = 287
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 85/283 (30%), Gaps = 4/283 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + + + + L+ + + +E R L + F I+ ++
Sbjct: 6 RGIICIILSAFSFALMALFLKLSGDLPAIEKSFFRNLVAAVMAFIMII---RSKEKIQIQ 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+N + T+ + + L+ + ++ +L
Sbjct: 63 KRNLHWFILRSLFGTLGIFCNFYAVDHLVLSDASCLNKLSPFFVIVFSYLVLKEKITPTQ 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+IAA + L ++ + G+ ++ FA + G M VL
Sbjct: 123 CACVIAAFVGSLFIVKPSFAGGMTPAAVIGFAGGMCAGFAYTCVRKLGLRGERGPMIVLF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + + + L GL + + A + + +Y
Sbjct: 183 FSTFSMLACVPYLIMDFHPISARQLFFLL-LTGLAAAGGQFGVTAAYTYAPAREISVYDY 241
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
T + + + + Q D + + + +++ A V+ L
Sbjct: 242 TQIMFSAIMGLLVFGQLPDMLSFVGYCVIIAAGVIMFLYNKRR 284
>gi|126463067|ref|YP_001044181.1| hypothetical protein Rsph17029_2307 [Rhodobacter sphaeroides ATCC
17029]
gi|126104731|gb|ABN77409.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17029]
Length = 303
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 92/294 (31%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T+ G L++ + + + G+T + + + R + + +V
Sbjct: 8 PSRTRTLEGVLWMLASGVSFVGVTGIVRYLGTDIPAAQGAFLRFAFGALFLLPTLV---- 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + YA+ + ++ PV+ +
Sbjct: 64 ---PVLRQGVPMSTLKLYGLRGAFHTAAVICWFYAMARIPVAEVTAIGYLNPVLVTVGAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+F ERL +I+A + ++ LI+ L + ++ +A FA +
Sbjct: 121 LFFSERLALRRILAVAVALVGALIVLRPGLRELSAGHLSQLCAATLFAGSYLLARRLSDV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++A+ + + + + L+L + + + A L
Sbjct: 181 AGAGAIVAMMSGTVTLGLLPFALLVWVPVGVDQLLWLALVAVFATAGHYCMTRAFGAAPL 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + L + + +D + GI++ A+ + +
Sbjct: 241 TVTQPVTFLQLLWATLLGALAFGERVDPFVLLGGGIIISAISYITWRESVLKRR 294
>gi|255283974|ref|ZP_05348529.1| transporter [Bryantella formatexigens DSM 14469]
gi|255265427|gb|EET58632.1| transporter [Bryantella formatexigens DSM 14469]
Length = 309
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 93/294 (31%), Gaps = 15/294 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A LWG ++ + L + E+++ R ++ + +V F L ++
Sbjct: 13 FLILLAGCLWGSMGIFVRTLNAWGMESFEIVALRSYVTMVCMLVLLVVFQRKLLKIRL-- 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
L + + ++ + + + PV+ V + +V +E++
Sbjct: 71 --RDIWCFLGTGLCSIVFFNYCYFRTIMETSMPVAAVLLYTAPVMVVLMSAVLFREKITP 128
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIA--------VTWSAYCFARKTIPVGSSEGFF 197
++ A +++++ ++ G ++ Y +
Sbjct: 129 AKMAALVMVVIGCALVAGLVGNGHTLTPAGLLVGLGAGFGYALYSIFSRYALERGYHPLT 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL-IGYGLLNSFVFCIFSYGIKRAKL 256
I ++ + + + + + + +++ G+ +
Sbjct: 189 ILFYTFTFASVGVLPFADMGAVWDAVTADAAHAGISLVFGLVSTVVPYFVYTMGLSSVEN 248
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T I+ P+ + + + +D + +V ++++ L G+
Sbjct: 249 GTASILASVEPVTASILGIVLFGDRVDAWQAAGMLLVFASIIICNLAPKETKGR 302
>gi|78047389|ref|YP_363564.1| drug/metabolite transporter superfamily protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78035819|emb|CAJ23510.1| drug/metabolite transporter superfamily protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 302
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 95/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + L++ + +G+ + + ++ E+ R + L + IV
Sbjct: 2 TPAQLSRRAALWMLTSTFAFGLMAITIRLASSTIATTEIAFFRNAFGLLALLPLIVRPGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 62 PLPRTRQLPQ-------YFARTLIGLASMLCGFWAIGHLPLSQAISLSYSTPLFVTVLAV 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V+L E++ + +A + +L++ + +A A I +
Sbjct: 115 VWLHEQVRLRRWLAVAAGFIGVLVILRPGSSTFTPGLLIALLAAVISAIVAIQIKQLSRS 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + ++L+ G+ + ++ +K ++
Sbjct: 175 DDSDTVVFYTYVFWVPMSLIPALFQWNWPQGIGWVWLVATGIFGTAGQLFWTRALKLGEV 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + + + L+ + ++ + I+ I I++ A V + + +
Sbjct: 235 SALQPISFMQLPLVALLGWWLFGEAIERHTVIGAAIIIGANVYIAHRETVLARR 288
>gi|313892293|ref|ZP_07825886.1| putative membrane protein [Dialister microaerophilus UPII 345-E]
gi|313119431|gb|EFR42630.1| putative membrane protein [Dialister microaerophilus UPII 345-E]
Length = 294
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 89/291 (30%), Gaps = 11/291 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G I WG + + Q+L S + S R+L + + + +
Sbjct: 2 SDRIKGIAMAATGAIFWGSSGIAGQYLLNVIGFSPEWLSSFRMLTAGILLLIFDITQNRQ 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + K +++F + + + + + ++ P+I V +
Sbjct: 62 -NIFEILKKTKNLKDLVIFGVFGVLGAQYTYFVTIKASNAAVATVLQYLMPIILVIWACI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPV 190
K + ++++ A+L L + H L + A + + +
Sbjct: 121 KEKRKPRKIEMLCAILATLGTFFIVTHGNYETLQVSPKALTWGLISALCAAVYTMQPQEI 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + I ++ + + F+ F +F
Sbjct: 181 LKKYRTSLVVGWAMIIGGICLLCYALTTPFVGQINTESVAAFIYVVIFGTVIAFGLFLAS 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
K K GI+ PL ++ S+ I + +++ A++
Sbjct: 241 TKYIKPQEAGIVGALEPLSSVIFSIIIFAITFGIYELVGMALIISAVIFVT 291
>gi|319427732|gb|ADV55806.1| protein of unknown function DUF6 transmembrane [Shewanella
putrefaciens 200]
Length = 294
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 114/291 (39%), Gaps = 9/291 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + A +++G T L+++ + +S L++ R + + + I + LSL
Sbjct: 9 GLIELHLAVLMFGGTALFSKLI-PLSALDITFWRCIVAALILALLIKFSRKPLSLE---- 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + I+++HW + A+ + ++F PV++V + ++
Sbjct: 64 -HKHDYLIAIALGIIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLLTGNKIKL 122
Query: 146 LQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +I+ +L+ + ++++ S L +AI + + AR + + +
Sbjct: 123 IDMISGILVFIGVILLIPEANFSNDTTLGIAIGILSAMLFTARNLLQKRYFTQYSGPHAM 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ V + + L ++ + + +F+ +++ TVG++
Sbjct: 183 FYQTLVAAVFLMPWHETPLNSITLDVWELIILLGIVFTAAPHALFTSALRQLSAKTVGLV 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P + ++ IL + ++ + I+V + + + + K
Sbjct: 243 SCLQPFYGAMLALMILGETLNLNTLLGGTIIVATAIFETHQSHQSLRRKKR 293
>gi|218682231|ref|ZP_03529832.1| hypothetical protein RetlC8_25475 [Rhizobium etli CIAT 894]
Length = 298
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 82/290 (28%), Gaps = 5/290 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +F A ++ + ++ L + V R GGL T
Sbjct: 7 GYIFALLALTIFSLQDAISKHLASAYPPIFVTMIRYWAFALFTIVLASKMRGGLKATART 66
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + V +LAV I + + TP++ L L ER+
Sbjct: 67 KR----PFLQVTRGVLLAVQVVLAITCFAVIGLARSQAIFSATPILIALLAMPILGERVG 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A + +L++ G + S + FA I M
Sbjct: 123 WRRWAAIGAGLFGVLLILKPEGEFFDVKLLIAVASCFNFAFYVIATRLVSRDDSSMTSFF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ V G ++ + D ++ + + + V + Y
Sbjct: 183 YTGVVGGVTMTLIGPFYWSWMSPGDWGWMALVCMTSISSHYFLIRAYDILDAAAVQPLTY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + V I + + + IVV A + + + +
Sbjct: 243 LSLVYASIIGVTIYGETLSFNMIVGSVIVVGAGIFTVWREHVVGRRTAAA 292
>gi|254503876|ref|ZP_05116027.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222439947|gb|EEE46626.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 320
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 98/292 (33%), Gaps = 7/292 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ G LF + ++ + L ++I VL++ V I+
Sbjct: 4 SLKGFLFALSGFAIFSTHDAIIKTLGGTYPAFQIIFFSVLFAFVPVSLIILA------DG 57
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K P+ G+++ +++ V YA F TP++ L L E
Sbjct: 58 KADNFRPRRPGLVLLRSSLAIVAMSGGFYAFTVLPLAEVYALLFATPLLVTALSVPLLGE 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + IA ++ ++ ++I+ L + +A SA + +I V G
Sbjct: 118 TVRFQRWIAVIVGLIGVVIVLRPGVSALSAGHMAALLSAGANSLSSILVRKIGGQERSAV 177
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ P + ++ + I D + G L+ + A + V
Sbjct: 178 LILYPMILMLIVMSILMPSSYQPMAIGDLGLMAAIGFLSVIAQSAIIGAYRAAPAAVVAP 237
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++Y+ L + + D + I+V + + + + +
Sbjct: 238 LQYSQILWAALFGALFFSETPDFYVALGSTIIVASGLFVVWREAQENVSARR 289
>gi|222149830|ref|YP_002550787.1| hypothetical protein Avi_3854 [Agrobacterium vitis S4]
gi|221736812|gb|ACM37775.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 301
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 84/292 (28%), Gaps = 5/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T +G +F F AY ++ + ++ L S + V + R W+ + S
Sbjct: 2 KSTSLGYVFAFAAYTVFSMQDGISKHLGDSYSPVVVATVRY-WAFAIFALILAARSRNGL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K P + +L I A + + P+ L L
Sbjct: 61 VAAVKTKRPILQILR---GLLLGAQILVSIAAFHYVGLAQSQAIFAAGPIFVALLSVPLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ + A L+ +L ++++ + + A A I
Sbjct: 118 GEQVGWRRWTAILVGMLGVVLILSPGSGSFSLMVALPLFCALSGAFYGILTRLVSRDDPP 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + V D +++ + +
Sbjct: 178 VTSFFYMCMVGFVGANCMAPFFLAPIARQDWFWMLALCCTGIAGHFSLIKAYEHLNAVVL 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y +L + +V + + + + IVV A + + + + +
Sbjct: 238 QPIAYYQLVLGSIIAVTVFGESLTHNMVLGSVIVVGAGLFTVWREQVVARRK 289
>gi|313156991|gb|EFR56423.1| putative membrane protein [Alistipes sp. HGB5]
Length = 308
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 86/284 (30%), Gaps = 3/284 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L+ + +G+ PL++ L ++ +R+L S + +
Sbjct: 5 SNIKGVLYAVVSSATFGLIPLFSIPLLHAGMASPTILFYRMLLSAAIMAAVALLLKRNFR 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + ++ + ++ + +I + + + F +
Sbjct: 65 ISRRDFGVLAGLSLMYAATSLGLLRSYDYIPSGVATTVNFLYPLVVTIVMTLFFRERSSV 124
Query: 140 KERL-NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + ++ L+ + + T++ Y G + +
Sbjct: 125 WIVIAVFISLVGVALLAWGDAGNNDPGRGLIYAGTTVFTYAVYIIGVMKSRAGRLDPLIV 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
VL A ++V+ + G L+ L IK +
Sbjct: 185 AFYVLTFSAAVFLVYALSTSGIAVVHTWHIWRNLLLLALLPTVLSNLTLVLAIKHIGSTM 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I+ PL ++ V + D +VV A+++ +L
Sbjct: 245 TSILGSMEPLTAVLVGVVHFGEGFDLDSAAGLILVVTAVIIVIL 288
>gi|307250294|ref|ZP_07532247.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306857676|gb|EFM89779.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
Length = 297
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 119/294 (40%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L +S + R++ +LP +FFAI
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ ++TI+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KRLKQQPHLILVILITSTIVGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVAFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + AY R+ + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPAYFHIRRKFQLSNIYSFVFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + N F+ +++ ++ + +G
Sbjct: 183 MCLIPISLYFIW---NTDMDFIHAQNPNIYYFIAILSVVSGSALLSYTLASTILPFNVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|83721305|ref|YP_441523.1| hypothetical protein BTH_I0969 [Burkholderia thailandensis E264]
gi|83655130|gb|ABC39193.1| membrane protein, putative [Burkholderia thailandensis E264]
Length = 402
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 89/297 (29%), Gaps = 16/297 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L+V + +G ++ ++ VL ++ R + +
Sbjct: 103 ARRGALYVALSAAAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRWP- 161
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ A + AL Q L + ++ P L + +L
Sbjct: 162 -----RGRALAAIIGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLG 216
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF---- 196
ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 217 ERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLA 276
Query: 197 ----FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ L F H+ + + F G+
Sbjct: 277 TVAIICCAAAATLVVLALARATVFDAPPHWPRAASGWAALVAIALVSTVAAMLAFFAGLA 336
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
R + ++ P++ + + + + + ++ + +++A++ + +
Sbjct: 337 RLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWMGGVAILVAVLWLVRAGSSSDR 393
>gi|330821968|ref|YP_004350830.1| hypothetical protein bgla_2g29030 [Burkholderia gladioli BSR3]
gi|327373963|gb|AEA65318.1| hypothetical protein bgla_2g29030 [Burkholderia gladioli BSR3]
Length = 299
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 104/295 (35%), Gaps = 6/295 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---L 78
G A L+ + +Y + L ++ L++ + R++W+LPG +
Sbjct: 7 EARRGLTLSVAASALFALMSVYAKLLAPLTGLDIFAWRIVWTLPGALALVAMRGRFGELF 66
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + M++ +L V F++A L + S YF+ P+ V +G
Sbjct: 67 GFVRRLFGERRIALMVLGGTAMLGVQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFV 126
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+E L+ LQ A L +L + + F + F
Sbjct: 127 YRESLSLLQWCAIAFAALGVLHEVWATRAFAWPTLLVALGYPPYFMLRRRIDIEPLTLFA 186
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +P + + L L L + S + ++
Sbjct: 187 VEMIALLPVALLTLATVGTPLAGRTLLGAVLLPGLGVLSTLALGCYLKTSRML---PMAL 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
GI+ Y P+L++ +V +L +P+ + +G + +A+ + + + + +
Sbjct: 244 FGILGYVEPVLIVAVAVLLLGEPLSAQQLGTYGPIWVAVALTAWHSYLVMRRVRA 298
>gi|170741135|ref|YP_001769790.1| hypothetical protein M446_2944 [Methylobacterium sp. 4-46]
gi|168195409|gb|ACA17356.1| protein of unknown function DUF6 transmembrane [Methylobacterium
sp. 4-46]
Length = 311
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 89/291 (30%), Gaps = 6/291 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V + I + ++L + LE+ R + + + A +
Sbjct: 24 QPLRGIGLVVLSTIFLSSSDAIAKYLSGSLPALEIAWLRYVGFVGVMLAAALLTRRRGRS 83
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + V L F+ L + FV+P+ L L
Sbjct: 84 PLRSARPG----LQVLRGLALVGSALLFLSGLRYLPVAEATAISFVSPIFVTALSIPLLG 139
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + IAAL+ ++ +LI+ A+ S+ +A + G+
Sbjct: 140 ETIGVRRWIAALVGLVGVLIILRPGTSAFQLAALLPVASSLFWALALVATRKINGYDAPQ 199
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ AL + N+ + GL+++ I + + A ST+
Sbjct: 200 TTMTWSALVGFAVLTCLVPFAWVAPNLDEIAIGAAVGLISTTGHWIVTTAYRHAPASTLV 259
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
YT + + D +V+ A +Y G
Sbjct: 260 PFSYTQIVWAALIGALAFGSRPDAFVGAG-VLVIAASGLYTAHRERLRGAR 309
>gi|228475322|ref|ZP_04060046.1| integral membrane domain protein [Staphylococcus hominis SK119]
gi|228270698|gb|EEK12112.1| integral membrane domain protein [Staphylococcus hominis SK119]
Length = 288
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 100/288 (34%), Gaps = 6/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I+ + +
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIIKYRQPI-- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + +L+ +T+ + IYA+ + P ++ L +FLK
Sbjct: 60 ----LGKMSSQPLLMTRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + QIIA L+ I +L + + ++A +S A V +
Sbjct: 116 ENIKRYQIIAMLIAIFGMLFIVKPEFSSTMFSSLAGLFSGIFAASAYTCVRALSKREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + ++L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFSIATYEPMTKLQIIYLLGAGLSAAVGQIGITLAYSFAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I Y + L + + + D I + I++ A S
Sbjct: 236 IFTYASILFTALFGFILFGETPDFYAFIGYIIIIGASYFMFEKARRQS 283
>gi|124485879|ref|YP_001030495.1| hypothetical protein Mlab_1059 [Methanocorpusculum labreanum Z]
gi|124363420|gb|ABN07228.1| protein of unknown function DUF6, transmembrane [Methanocorpusculum
labreanum Z]
Length = 317
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/291 (8%), Positives = 86/291 (29%), Gaps = 15/291 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + A + WG ++T+ L + +++ + R + + +++
Sbjct: 18 SEIRLAPFLIILAAVCWGTIGIFTRELQAAGFTSVQITAARCAVTALCLVMGLLFTDRDK 77
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + ++ + S + P + +
Sbjct: 78 LKIVP----KDIWMFIGTGLLSIVFFNICYFTSIQYLTLSMASVLLYTAPFFVMLMSLFL 133
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIP 189
E++ + IA +L ++ G + S+ ++ Y +
Sbjct: 134 FHEKMTIQKGIALILAFSGCVLTAGIVGDQINSITEIGILIGLGSGFGYALYTIFGRVAL 193
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
L + + + LI + + +++
Sbjct: 194 KKYHPITITTYTFLIAAIGILPFCDVGNMVQLSLGNTGILPYILILSIVCTVLPYFLYTK 253
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
G+K + +M + P++ + +F+ + + + ++ A+V+
Sbjct: 254 GLKHVEGGKASVMAFVEPMVATLIGIFLFHEQMTLLNMTGVVLIFAAIVLL 304
>gi|325279818|ref|YP_004252360.1| hypothetical protein Odosp_1115 [Odoribacter splanchnicus DSM
20712]
gi|324311627|gb|ADY32180.1| protein of unknown function DUF6 transmembrane [Odoribacter
splanchnicus DSM 20712]
Length = 310
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 99/294 (33%), Gaps = 3/294 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + A +G+ PL+ L ++ V+ R L+++P + IV L +
Sbjct: 6 KGYILGAVAAATYGMNPLFALPLYKAGMNPDSVLFFRYLFAIPVLGMMIVARGRSFKLKR 65
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +G+LV +++ ++ + + F + L
Sbjct: 66 KEVLPLIIMGLLVALSSLALFQSYNYMDVGIASTLLFVYPILVALIMWIAFKEKLTLPTV 125
Query: 143 LNHLQIIAALLIIL-SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L L + + ++ S TL+ +L + A++++ Y + + +
Sbjct: 126 LCILLALGGIGLLYKSGDGSTLNLTGIILVMISALSYAIYIVGVNQSTLKNLATLSLTFY 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + ++V F + + F + I+ + I
Sbjct: 186 VLLFGLVLFLVRVDFGQSLRVAETWYLWGNLIALAIFPTAISFLCTTQAIQYIGSTPTAI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ PL + V + + + + ++++A+ + + I + +K
Sbjct: 246 LGALEPLTAVFFGVVVFGESLTLRLSCGMLMIILAVTLIIAGGNITIYLVRFRK 299
>gi|298374388|ref|ZP_06984346.1| membrane protein [Bacteroides sp. 3_1_19]
gi|298268756|gb|EFI10411.1| membrane protein [Bacteroides sp. 3_1_19]
Length = 313
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 97/294 (32%), Gaps = 3/294 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + A +G+ PL+ L ++ V+ R L+++P + I L
Sbjct: 6 KGYVLGAIAAATYGMNPLFALPLYKAGMNPDSVLFFRYLFAIPVLGIMIKARGRNFKLKP 65
Query: 83 DTLKNPKAVGM-LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + +G+ + FS+ L + + + + F+ +
Sbjct: 66 NEIVPLILMGLLVSFSSLALFQSYNYMEAGIASTLLFVYPILVALIMAFVFKEKLTLQTI 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L + L+ S TL LL +A A++++ Y + + +
Sbjct: 126 FCILLALGGIGLLYKSGDGTTLSLTGVLLVMASALSYAIYIVGANRPLLKNIATLKLTFY 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL ++V F H + + F + ++ + I
Sbjct: 186 VLLFGMTLFLVRVDFGRSLHIVHDWYLWGNLIALAIFPTAISFLCTTLAVQYIGSTPTAI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ PL + V + + + ++++A+ + + + + S + +K
Sbjct: 246 LGALEPLTAVFFGVTVFGESLTLRLCCGIILIILAVTLIIAGSNVTSHLVRFRK 299
>gi|114765697|ref|ZP_01444795.1| Putative transporter, RhaT family, DMT superfamily protein
[Pelagibaca bermudensis HTCC2601]
gi|114541914|gb|EAU44949.1| Putative transporter, RhaT family, DMT superfamily protein
[Roseovarius sp. HTCC2601]
Length = 325
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 84/271 (30%), Gaps = 7/271 (2%)
Query: 37 WGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
+ + + L V S +++ VL+S P V ++ P
Sbjct: 18 YSAHDVVVKLLGSVYSPFQIVFFSVLFSFPLVSLMLI------RDTTPGHLRPIHPWWTA 71
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ YA T F P++ L L E++ + IA L+ +
Sbjct: 72 LRTVSAVITGLCAFYAFSVLPLAQTYAIIFAQPLLITVLAIPILGEQVRLRRWIAVLVGL 131
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
++++ L A +A C + +I V + +L P + VV
Sbjct: 132 AGVIVVLRPGATELTLGHAAALVAACCGSLSSIVVRKIGHEERSVVLLLYPMMTNVVLMA 191
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
+ + I + +L + + + V M+Y+ + +
Sbjct: 192 CALPFVYQPMPIEHLGGVGVMAVLALIASFVLIGAYRAGEAVIVAPMQYSQLIWATLYGA 251
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I + D + +++ + V +L
Sbjct: 252 LIFDEWPDEMTLAGAVLIIGSGVYIVLREGR 282
>gi|107100505|ref|ZP_01364423.1| hypothetical protein PaerPA_01001530 [Pseudomonas aeruginosa PACS2]
Length = 306
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/301 (11%), Positives = 93/301 (30%), Gaps = 16/301 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ + + + A LWG + + + ++ L VI R+ A
Sbjct: 1 MVEIPLTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFGRMALGSLVFLVAWR 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + +L + +++ +AL + P++
Sbjct: 61 WRGR------IDYRPGDWKYLLGLAVCEPCLYFLCESFALQYTSAAQAGMITALLPLLVA 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCF 183
+ L ER+ + I L +L + ++L L + +A+ +
Sbjct: 115 VGAWLLLHERIGRMTWIGFGLAVLGSIWLSLAGEPDLHAPQPLLGNFFELLAMLCATGYT 174
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
F + + LF++ S + + ++
Sbjct: 175 LLLKHLSARYSAFALTAMQAFVGTLFFLPLALASADLPSQPSALGIQAVVYLGVVVTVGA 234
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ ++++G+ R S P+ +V + L + ++ + + G+V I + +
Sbjct: 235 YGLYNFGVGRLPASQASGFINLIPVFTLVFAALFLGETLNGPQMLAAGLVFIGVAISQWR 294
Query: 304 T 304
+
Sbjct: 295 S 295
>gi|301308061|ref|ZP_07214015.1| putative integral membrane protein [Bacteroides sp. 20_3]
gi|300833531|gb|EFK64147.1| putative integral membrane protein [Bacteroides sp. 20_3]
Length = 313
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 97/294 (32%), Gaps = 3/294 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + A +G+ PL+ L ++ V+ R L+++P + I L
Sbjct: 6 KGYVLGAIAAATYGMNPLFALPLYKAGMNPDSVLFFRYLFAIPVLGIMIKARGRNFKLKP 65
Query: 83 DTLKNPKAVGM-LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + +G+ + FS+ L + + + + F+ +
Sbjct: 66 NEIVPLILMGLLVSFSSLALFQSYNYMEAGIASTLLFVYPILVALIMAFVFKEKLTLQTF 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L + L+ S TL LL +A A++++ Y + + +
Sbjct: 126 FCILLALGGIGLLYKSGDGTTLSLTGVLLVMASALSYAIYIVGANRPLLKNIATLKLTFY 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL ++V F H + + F + ++ + I
Sbjct: 186 VLLFGMTLFLVRIDFGRSLHIVHDWYLWGNLIALAIFPTAISFLCTTLAVQYIGSTPTAI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ PL + V + + + ++++A+ + + + + S + +K
Sbjct: 246 LGALEPLTAVFFGVTVFGESLTLRLCCGIILIILAVTLIIAGSNVTSHLVRFRK 299
>gi|113968932|ref|YP_732725.1| hypothetical protein Shewmr4_0588 [Shewanella sp. MR-4]
gi|113883616|gb|ABI37668.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-4]
Length = 294
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 117/297 (39%), Gaps = 9/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + A +++G T L+++ + +S L++ R + + + I + L
Sbjct: 2 SQTSKSSGLIELHLAVLMFGGTALFSKLI-PLSALDITFLRCVVAALVLTLLIKFRGKYL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
SL + + + + I+++HW + A+ + ++F PV++V +
Sbjct: 61 SL-----ASKQDYLVAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ + II+ +L+++ ++++ L +A+ + + AR +
Sbjct: 116 TGNKIKLMDIISGVLVLIGVVLLIPEANLGNDTTLGIAVGIVSAMLFTARNLLQKRYFSQ 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V + E + L ++ + + +F+ +++
Sbjct: 176 YSGPHAMFYQTLVAAVFLMPWHQTELQTISLGTWGLIVLLGVVFTAAPHALFTSALRQLS 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
TVG++ P + ++ IL + ++ I I+V + + + + K
Sbjct: 236 AKTVGLVSCLQPFYGAMLALVILGEALNLNTLIGGTIIVATAIFETHQSHQSQRRKK 292
>gi|152984139|ref|YP_001349671.1| hypothetical protein PSPA7_4318 [Pseudomonas aeruginosa PA7]
gi|150959297|gb|ABR81322.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 301
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 92/296 (31%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + A LWG + + + ++ L VI R+ A +
Sbjct: 1 MTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFARMALGSLVFLAAWRWRGR- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +L +A +++ +AL + P++ +
Sbjct: 60 -----IDYRPGDWKYLLGLAACEPCLYFLCESFALQYTSAAQAGMITALLPLLVAVGAWL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTI 188
L ER+ + I L +L + ++L L + +A+ +
Sbjct: 115 LLHERIGRMTWIGFGLAVLGSIWLSLAGEPDLHAPRPLLGNFFELLAMLCATGYTLLLKH 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F + + LF++ S + + ++ + +++
Sbjct: 175 LSARYSAFALTAMQAFVGTLFFLPLALASAELPSQPSALGIQAVVYLGVVVTVGAYGLYN 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+G+ R S P+ +V + L + ++ + + G+V I + + +
Sbjct: 235 FGVGRLPASQASGFINLIPVFTLVFAALFLGETLNGPQLLAAGLVFIGVAISQWRS 290
>gi|28210524|ref|NP_781468.1| membrane protein, putative transporter [Clostridium tetani E88]
gi|28202961|gb|AAO35405.1| membrane protein, putative transporter [Clostridium tetani E88]
Length = 292
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 89/282 (31%), Gaps = 6/282 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N F+ + + + + V +E R SL + I+
Sbjct: 8 NLEKSKGRAVAFMLLSSFCFAVMAALVKLSGDVPSIEKAFFRNFVSLIVSIYIIL----- 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + L+ + + Y + +S + P ++ +
Sbjct: 63 -KNKQKPWGKKENRKYLILRGIMGTAGLVCYFYCIDNMILADSSMLNKMHPFFTIIFAVI 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKE ++ +QI + +L L L + + A+ SA V
Sbjct: 122 FLKEDISLIQIFSLILSFLGALFIIKPKFDMSVIPALIGVVSAVFAGAAYTLVRHLGDKE 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ +L V+ + N+ + L+ G+ S +Y K S
Sbjct: 182 KSYTIVFYFSLISVISILPFMILTYKPLNLFQFIALLMAGIFASIAQYSLTYAYKIVAAS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I YT + + + I K+ D I + +++ + +
Sbjct: 242 EISIYNYTNVIFSQIIAFIIWKELPDIYSFIGYVLIIGSSYI 283
>gi|227494594|ref|ZP_03924910.1| DMT superfamily drug/metabolite transporter [Actinomyces coleocanis
DSM 15436]
gi|226832328|gb|EEH64711.1| DMT superfamily drug/metabolite transporter [Actinomyces coleocanis
DSM 15436]
Length = 315
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 80/276 (28%), Gaps = 11/276 (3%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +WG T + + + ++S +++ R + + +
Sbjct: 20 VLALLVASAIWGSTFIVIKDLVAEISPYDMLGVRYVITSVIMAAIFFPTLRK-------- 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + I V F + F + +I L V +
Sbjct: 72 ADRDTWKHGMVVGLIFGVGQVFQTVGISMTPASTAGFITGMYIIIIPLLMLVMYGVIPSR 131
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLS--LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+I+ L +L + I++L+ + +A + F +
Sbjct: 132 YVLISTFLALLGMGILSLNGWHIGWGELIVLASAGFFALHMILLGRWSTERTSFQLTIIQ 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
V GG + + I ++ + + G++
Sbjct: 192 IFGLTLVSVVTAVPGGVELPKSTAGWVALIYLIVFASVLALFIQTWAQSKVSPTRTGVVM 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T P+ ++ + + + ++++AM+V
Sbjct: 252 ATEPVFAAAFAIQFGGESLTLRMVLGGALILLAMIV 287
>gi|300771624|ref|ZP_07081499.1| DMT superfamily drug/metabolite transporter [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761613|gb|EFK58434.1| DMT superfamily drug/metabolite transporter [Sphingobacterium
spiritivorum ATCC 33861]
Length = 304
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 113/291 (38%), Gaps = 9/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L F A +WG + +++ +++ R+L ++ ++ I+ F
Sbjct: 15 FLAAFLAPFIWGFMSIPVRWIRGWPAEDILYFRILTAMLILWIFILIFRRKKLKEDIYHY 74
Query: 87 N-------PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K V + + ++ + +W +IY + +F+Y + P+I+ L
Sbjct: 75 KELVQKDKQKYVWLTILASLFIFGNWYTYIYCINHISIQAAAFAYMLCPLITTAAAHFIL 134
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+E L+ ++ A + S++++ S +L A+ + + G +
Sbjct: 135 REELSLIKKTALFFALCSVIMLATGSLTEVLWSIAIGGLYAFYLIIQRVVQGFDK--LNI 192
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + + VV + I L + + + + STV
Sbjct: 193 LAIQLLLCMVIVVPKLLFNHHALPTAPVFWYTTFIIALLFTIIPLYLSMFALNKISSSTV 252
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
GIM Y P++ + +VF K+ +D + +G++++A++++ + K
Sbjct: 253 GIMLYINPIIAFLLAVFYFKEQVDPHKFWAYGLLIVALLLFNSKILTKIRK 303
>gi|238025516|ref|YP_002909748.1| hypothetical protein bglu_2g22120 [Burkholderia glumae BGR1]
gi|237880181|gb|ACR32513.1| Hypothetical protein bglu_2g22120 [Burkholderia glumae BGR1]
Length = 298
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 107/292 (36%), Gaps = 6/292 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G A L+ + +Y + L ++ L++ + R++W+LPG + +
Sbjct: 10 RGVTLSVAASALFALLSVYAKLLAPLTGLDIFAWRIVWTLPGALLLVAMRGRFGELAGFV 69
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + A +L V F++A L + S YF+ P+ V +G +E
Sbjct: 70 RRVCGTRRLALAVGAGAAMLGVQLWLFLWAPLHGRMLEVSLGYFLMPLTMVLVGRFVYRE 129
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ LQ + + + + F + F
Sbjct: 130 SLSLLQWGSIACAAAGVAHEVWVTRAFAWPTLVVALGYPPYFMLRRRIEVEPLTLFAVE- 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
I L + + G + L+L G G+L++ + + ++ GI
Sbjct: 189 --MIALLPVALVTLAALGTPVGGHPVLWALWLPGLGVLSTLALGCYLKASRMLPMALFGI 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ Y P+L++ ++V +L + + + +G + +A+ + + + + +
Sbjct: 247 LGYVEPVLIVAAAVLLLGESLSMQQLGTYGPIWLAVALTAWHSYLRMRRVRA 298
>gi|153832323|ref|ZP_01984990.1| protein of unknown function DUF6, transmembrane [Vibrio harveyi
HY01]
gi|148871352|gb|EDL70215.1| protein of unknown function DUF6, transmembrane [Vibrio harveyi
HY01]
Length = 313
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/310 (11%), Positives = 96/310 (30%), Gaps = 12/310 (3%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISH 58
M + + S+ +K+ +G + +L+ I P++ + Q + +++
Sbjct: 1 MNTASDSNDQSESQTKKKPVSAVTIGVMLALAGTLLFSIKPVFVKLAYQYGGDAVSIMTL 60
Query: 59 RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGF 118
R + SLP + + K+ + LA + I AL
Sbjct: 61 RAMSSLPVYLGILFWTLRNSEYRGKVRKHGLKAASIGVLGYYLASYL--DITALNYISAQ 118
Query: 119 LTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----- 173
L F+ P V + + + A L+ L + ++ H
Sbjct: 119 LERLLLFLFPTFVVLIMWFKEGQSPKRSVLFAVLVGYLGVGLIVAHDLTHYGEKIWLGGG 178
Query: 174 ---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
+ A + + + ++ FS + + T
Sbjct: 179 LAIASAFVFAVYLVMSKASIAKLGSKLFTSIGMGSAGIAILIHLSFSSLQLNTMSEELIT 238
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ ++ + + + R + + ++ P + + ++FIL + +
Sbjct: 239 IGVLLGIFCTVIPSYLIAAAMARLDPAHLSLVSNIGPAMTALCAIFILDESFTWFHALGM 298
Query: 291 GIVVIAMVVY 300
+ V+++V+
Sbjct: 299 MLTVVSVVMI 308
>gi|21231235|ref|NP_637152.1| integral membrane protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768758|ref|YP_243520.1| integral membrane protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991874|ref|YP_001903884.1| Drug/metabolite transporter superfamily protein,probable
[Xanthomonas campestris pv. campestris str. B100]
gi|21112882|gb|AAM41076.1| integral membrane protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574090|gb|AAY49500.1| integral membrane protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167733634|emb|CAP51839.1| Drug/metabolite transporter superfamily protein,probable
[Xanthomonas campestris pv. campestris]
Length = 303
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 96/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
A + L++ + +G+ + + ++ E+ R + L + IV
Sbjct: 3 TAQPASARAALWMLVSTFAFGLMAITIRLASKDIATTEIAFFRNAFGLLALLPLIVRPGK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 63 PLPRTRQLPQYLAR-------TLIGLASMLCGFWAIGHLPLSQAISLSYSTPLFVTVLAV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E++ + +A + +L++ + +A A I +
Sbjct: 116 IWLHEQVRLRRWLAVAAGFVGVLVILRPGSSTFTPGLLIALLAAVISAVVAIQIKQLSRS 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + + D L+LI G+ + ++ +K ++
Sbjct: 176 DDSDTVVFYTYVFWVPMSLIPALFQWTWPHGIDWLWLIATGIFGTAGQLFWTRALKLGEV 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + + + L+ + ++ + I I I++ A V + + +
Sbjct: 236 SALQPISFMQLPLVALLGWWLFGEAIARHTVIGAAIIISANVYIAHRETVLARR 289
>gi|307729324|ref|YP_003906548.1| hypothetical protein BC1003_1280 [Burkholderia sp. CCGE1003]
gi|307583859|gb|ADN57257.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1003]
Length = 413
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 81/288 (28%), Gaps = 21/288 (7%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + +WG+ + L + V + L S G F ++ G + ++
Sbjct: 12 LAIMLGASVWGMIWYPLRMLASLGVTGTAAS-ALTSGAGCLFVLIVRRGAIRTVR----- 65
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L A + F++ + Q +++TP + L ERL
Sbjct: 66 --WHWLLPALALAAGITNLGFVWGSIHGQVMRVLLLFYLTPAWTALFAHFILHERLTRSG 123
Query: 148 IIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ A L + + M + + + A E
Sbjct: 124 VGLAALSLAGAMTMLWSPKAGIPLPANLAEWAGLAGGMGFAMSNVLILKTSRVLPQMKPE 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDT-----LFLIGYGLLNSFVFCIFSYGIKRA 254
M I + S E ++G G L + + YG+ R
Sbjct: 184 MRTATIFGGAALFGACASLFEAMPAPPAGAHLVSAAWLVLGLGFLLASNNMLVQYGLARV 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ I+ ++ +S+ + +V+A +
Sbjct: 244 PANRASIIMLFELVVTALSAWLFAGEAPGPREWAGGACIVLASALSSW 291
Score = 39.5 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 34/133 (25%), Gaps = 1/133 (0%)
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
+A+ A + P+ + + +
Sbjct: 9 WPTLAIMLGASVWGMIWYPLRMLASLGVTGTAASALTSGAGCLFVLIVRRGAIR-TVRWH 67
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
L L F +G ++ V ++ Y P + + FIL + + +
Sbjct: 68 WLLPALALAAGITNLGFVWGSIHGQVMRVLLLFYLTPAWTALFAHFILHERLTRSGVGLA 127
Query: 291 GIVVIAMVVYLLP 303
+ + + L
Sbjct: 128 ALSLAGAMTMLWS 140
>gi|89052622|ref|YP_508073.1| hypothetical protein Jann_0131 [Jannaschia sp. CCS1]
gi|88862171|gb|ABD53048.1| protein of unknown function DUF6 transmembrane [Jannaschia sp.
CCS1]
Length = 321
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 92/287 (32%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G L A+ ++ + ++L + +++ VL+ P V F ++
Sbjct: 2 TPNIRGALLGLLAFGIFSTHDIIVKYLGGTYAPFQIVFFSVLFGFPIVTFLLL------R 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ PK + + YA F P++ L L
Sbjct: 56 DATEANLRPKHPWWIAARSLASVTVGICAFYAFTVLPLAQVYAIIFAAPLLITVLAIPML 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A ++ ++ ++++ L A +A A ++ +
Sbjct: 116 GETVGWRRGLAVVVGLVGVVVVLQPGSTTLSLGHGAALLAAVGGAIASLIMRKVGREERS 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L P V G + ++ D L L + + A V
Sbjct: 176 VVMLLYPMSANFVLMGAALPFYYQPMPGQDLAALAVISALALTASACLIFAYRAAPAVLV 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
M+Y+ L V + + +D I I++ + + +L
Sbjct: 236 APMQYSQILWAAVFGFLLFDEGLDAPILIGSAIIIASGIYIVLREDR 282
>gi|84499868|ref|ZP_00998134.1| membrane protein, putative [Oceanicola batsensis HTCC2597]
gi|84391802|gb|EAQ04070.1| membrane protein, putative [Oceanicola batsensis HTCC2597]
Length = 311
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 99/297 (33%), Gaps = 7/297 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + + L+ + + + L VS+ ++++ R + G
Sbjct: 7 NDNVKGALVMVLSMALFTLNDTFMKTLADEVSLYQILTLRNGAVTVVLLVLAWRMGGLRK 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + G+ V FF+ AL + P++ + ++FL
Sbjct: 67 GL-----TRRDAGLAVIRGLAEVATAYFFLTALFNMPLANVTAVLQSAPLMVMLAAAIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + ++ A + +L++ ++ + C + I
Sbjct: 122 GEPIGWRRVTAVVAGFCGVLLIVRPGTEGFNVYSLYTLVAVLCLTVRDIVTRKLSPEAPT 181
Query: 200 MCVLAIPA-LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
M V AI + L + + FS G + + G L+ + ++ ++S
Sbjct: 182 MLVTAITSGLVCLFFGAFSTGVDWVALTPRSGGMIAGAALMVLGAYLSSVTAMRLGEVSF 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V YTA L + + + + I +VV + + L + +++ +
Sbjct: 242 VSPFRYTAMLWALALGFVVFGEWPTGLTLIGAAVVVGSGLYSLWRETVRVRRDRDAQ 298
>gi|150010031|ref|YP_001304774.1| putative integral membrane protein [Parabacteroides distasonis ATCC
8503]
gi|255012699|ref|ZP_05284825.1| putative integral membrane protein [Bacteroides sp. 2_1_7]
gi|256838841|ref|ZP_05544351.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262382664|ref|ZP_06075801.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|149938455|gb|ABR45152.1| putative integral membrane protein [Parabacteroides distasonis ATCC
8503]
gi|256739760|gb|EEU53084.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262295542|gb|EEY83473.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 313
Score = 81.5 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 97/294 (32%), Gaps = 3/294 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + A +G+ PL+ L ++ V+ R L+++P + I L
Sbjct: 6 KGYVLGAIAAATYGMNPLFALPLYKAGMNPDSVLFFRYLFAIPVLGIMIKARGRNFKLKP 65
Query: 83 DTLKNPKAVGM-LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + +G+ + FS+ L + + + + F+ +
Sbjct: 66 NEIVPLILMGLLVSFSSLALFQSYNYMEAGIASTLLFVYPILVALIMAFVFKEKLTLQTI 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L + L+ S TL LL +A A++++ Y + + +
Sbjct: 126 FCILLALGGIGLLYKSGDGTTLSLTGVLLVMASALSYAIYIVGANRPLLKNIATLKLTFY 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL ++V F H + + F + ++ + I
Sbjct: 186 VLLFGMTLFLVRIDFGRSLHIVHDWYLWGNLIALAIFPTAISFLCTTLAVQYIGSTPTAI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ PL + V + + + ++++A+ + + + + S + +K
Sbjct: 246 LGALEPLTAVFFGVTVFGESLTLRLCCGIILIILAVTLIIAGSNVTSHLVRFRK 299
>gi|88854927|ref|ZP_01129593.1| integral membrane protein [marine actinobacterium PHSC20C1]
gi|88816088|gb|EAR25944.1| integral membrane protein [marine actinobacterium PHSC20C1]
Length = 321
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 86/294 (29%), Gaps = 15/294 (5%)
Query: 31 FCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
A ++WG + L+ + L+ VS +V R + + L +
Sbjct: 27 AGAGLVWGSSFLFMKVALDGVSFGQVAWTRAVLGALTLIVVFALSRRRLPRQPIVWAHFT 86
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ L L W + + + ++ E+L QI
Sbjct: 87 VLAFLFAVIPYLLFAWAEQYVSSGLASIYNATTPIMTAIFATLVF----RVEKLTRSQIA 142
Query: 150 AALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
L I +L++ G A +A + R+ + G
Sbjct: 143 GVTLGIFGVLVIISPWQAGDISGSLLGQLACLGAAVCYGAAMSYQRRFVAPYRVAGVTSA 202
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + A+ Y++ L L L + + +
Sbjct: 203 TMTIGLAAVVYLILTPVVATGPVTLTLPVVASLLAVGVLGTGLAYVWNYRVLAEWGPTRT 262
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ Y P++ ++ ILK+ + + +V+I +++ + GK +
Sbjct: 263 STVTYITPVVGVILGAVILKETMSWHEPVGAVLVLIGVLLAQGRLKLPLGKERA 316
>gi|183602217|ref|ZP_02963584.1| putative permease [Bifidobacterium animalis subsp. lactis HN019]
gi|241190156|ref|YP_002967550.1| putative permease [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241195562|ref|YP_002969117.1| putative permease [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|183218431|gb|EDT89075.1| putative permease [Bifidobacterium animalis subsp. lactis HN019]
gi|240248548|gb|ACS45488.1| putative permease [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240250116|gb|ACS47055.1| putative permease [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295793143|gb|ADG32678.1| putative permease [Bifidobacterium animalis subsp. lactis V9]
Length = 350
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 85/294 (28%), Gaps = 11/294 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVY 73
E +G V WG+ ++ L + L + R + + A +
Sbjct: 57 EQTPRKMAIGIACVLIGGTCWGVNGAVSKILMEEYHAAPLWIACVREIIAGIIFLVAAMI 116
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
SL + + + T + + +++++ + V ++ +
Sbjct: 117 -GTPHSLRSAVTSWREYPKFVGAALTCVTLVQVAYLFSIHWTNAGTATVLQTVNLLMVLI 175
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
V K R ++I L + + ++ + LS+ + + A +
Sbjct: 176 YVCVRAKRRPTKREVIGVALAFVGVWLLATGGKLSTLSMPLPGLFWGLMDAFSCACLAII 235
Query: 194 E-------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
G + + + ++ L + F +
Sbjct: 236 PVGLIARYGNLTFNGLTFLISGLILLPFVKPWQNMPHFDARGWWLMAFTVVVGTVVAFWL 295
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F G+ R ++ P+ +SSV V + F +++I +
Sbjct: 296 FMAGVVRIGSMRATLLATIEPVTATISSVLWTGSVFTPVDIVGFVLILIMSFLV 349
>gi|307719192|ref|YP_003874724.1| transporter [Spirochaeta thermophila DSM 6192]
gi|306532917|gb|ADN02451.1| putative transporter [Spirochaeta thermophila DSM 6192]
Length = 302
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/299 (10%), Positives = 103/299 (34%), Gaps = 12/299 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G + + ++WGI+ + T+ L + + R + + +
Sbjct: 1 MDRDKLVGVAAMLFSVVVWGISFVSTKIVLAAFGPMMLAFIRFAVGVVVLALLLRLQRKS 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
LS+ + + ++ + +++ F LL S P++S+ + +V
Sbjct: 61 LSV-----RRGQGALLIAGGVIGVTLYFYFENTGLLHLPASDASLIVASIPIVSLLVEAV 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS------LAIAVTWSAYCFARKTIPVG 191
+ + +++ ALL + ++ +A A +
Sbjct: 116 VFRRGMGVREVVGALLSFAGVYLIVREGLRLTGRPVGYLLMAGAAASWVAYGFLSRPVLE 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+++ + ++ + + L ++ + + +
Sbjct: 176 ANDRLVVVFWHFVAGTAAFLPFLPGEAQNLEAVHLGVIGHLLFLGVGCSALAYWTYQVAL 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
R ++ + P + +++++ +L + + ++ + +V++++ + LLP G+
Sbjct: 236 HRLGVAVANVFINLIPFVTVLTAMVVLGEALSPLKWVGGAVVIVSVSIALLPAKPKKGR 294
>gi|168183016|ref|ZP_02617680.1| putative membrane protein [Clostridium botulinum Bf]
gi|182673785|gb|EDT85746.1| putative membrane protein [Clostridium botulinum Bf]
gi|322805487|emb|CBZ03051.1| permease of the drug/metabolite transporter (DMT) superfamily
[Clostridium botulinum H04402 065]
Length = 293
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + +FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAVLCWASYGVFSKKVMPRYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 MTLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYISILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ IV S IL + I + + +++ + +
Sbjct: 243 IGPSKTSIFVNLVPISSIVLSSMILGEKITIITLLSTALIIAGVYI 288
Score = 39.5 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 39/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + L
Sbjct: 4 SRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|218528860|ref|YP_002419676.1| hypothetical protein Mchl_0830 [Methylobacterium chloromethanicum
CM4]
gi|218521163|gb|ACK81748.1| protein of unknown function DUF6 transmembrane [Methylobacterium
chloromethanicum CM4]
Length = 333
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 86/296 (29%), Gaps = 10/296 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + A + + + L V L R ++ V I
Sbjct: 38 RRLVGIALMCVAPVFFASLDATGKVLAGAGVDPLLTTFMRYAVNVALVTALI------NP 91
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + + + + +L AL + Q T F P+ L L
Sbjct: 92 VTRPGVAHSRRLPLQILRSLLLFGSTACNFLALRSLQLAETISIQFAAPLTVALLAGPLL 151
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++ A + +L++ + + + C+A I
Sbjct: 152 GEWSSRMRLAAVATGFVGVLVIVRPDALAAKPAILFSLGAMLCYAIYVIVTRKLAAHDST 211
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + + + LI GL + + RA S
Sbjct: 212 ATTVFYTGLGGLAVMSPLLPWIWTAPASGTVWALLIAVGLFGTIGHWLLVLAHARAPASL 271
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKT 313
+ YT L ++ + + GI+V + + ++ +
Sbjct: 272 LAPFIYTQILWSVLLGYLLFGDVPSAWTMLGAGIIVASGLALLSEDALMRRHARRR 327
>gi|329121602|ref|ZP_08250223.1| DMT superfamily drug/metabolite transporter [Dialister
micraerophilus DSM 19965]
gi|327468757|gb|EGF14234.1| DMT superfamily drug/metabolite transporter [Dialister
micraerophilus DSM 19965]
Length = 294
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 92/291 (31%), Gaps = 11/291 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G I WG + + Q+L ++S + + R+L + + + +
Sbjct: 2 SDRIKGISMAATGAIFWGSSGIAGQYLLNVMEISPEWLSTFRMLTAGIILLIFDITQNRQ 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + K +++F + + + + + ++ P+I V +
Sbjct: 62 -NIFEILKKTKNLKDLVIFGVFGVLGAQYTYFVTIKASNAAVATVLQYLMPIILVIWACI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPV 190
K + ++++ A+L L + H L + A + + +
Sbjct: 121 KEKRKPGKIEMLCAMLATLGTFFIVTHGNYETLQVSPKALTWGLISALCAAVYTMQPQEI 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + I ++ + + F+ L F +F
Sbjct: 181 LKKYRTSLVVGWAMIIGGICLLCYAITTPFVGKINTESVAAFIYVVILGTVIAFGLFLAS 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
K K GI+ PL ++ S+ I I +++ A++
Sbjct: 241 TKYIKPQEAGIVGALEPLSSVIFSILIFSISFGIYELIGMALIISAVIFVT 291
>gi|309774867|ref|ZP_07669888.1| putative membrane protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308917425|gb|EFP63144.1| putative membrane protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 291
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/290 (15%), Positives = 106/290 (36%), Gaps = 12/290 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L+ + +L+GITPL T + + V+ +R L+ +P + + ++
Sbjct: 4 KGILYTVLSAVLFGITPLITTAVYGYGANSMTVVFYRSLFVIPMLAVIMKARGISFTISV 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L+N + + T + + + + +F+ PV L ER
Sbjct: 64 RDLRNTGIIAVFGSGLTTILL-----FSSYTYIDVGCATTLHFLYPVFVSLLCFAVYHER 118
Query: 143 LNHLQIIAALLIILSLLIM-----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L +++A + L T +++ + A+T++ Y + + +
Sbjct: 119 LGRRKLLALGMAFAGALCFFDLTNTGSIIGLIMAASSALTYAFYMVQLEKTRLSHQNAYK 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I + L +V++ F L L L+ + + + GI++ S
Sbjct: 179 ISFYLAIFILLETLVYHLLFSSIQFILPWNAYLLILLLSLVSSFLAVVLLQKGIQKLGSS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
T + P+ ++ VF L++ + + I++ A+++
Sbjct: 239 TASLFCLFEPITSVICGVFFLQETLTPAKAAGCLIILTALIIMSREQNRK 288
>gi|126739224|ref|ZP_01754918.1| hypothetical protein RSK20926_22529 [Roseobacter sp. SK209-2-6]
gi|126719841|gb|EBA16549.1| hypothetical protein RSK20926_22529 [Roseobacter sp. SK209-2-6]
Length = 306
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 99/287 (34%), Gaps = 8/287 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L++ + + + L +V + R L + + L+
Sbjct: 16 KGVLWMLVTGLCFVAVTALVKMLGTEVPPAQSAFLRYFLGLVFLLPVL-------GTLRK 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
T P+ + + + + +A+ + +++PV ++FL ERL
Sbjct: 69 THIAPRDWLLFAGRGGVHTLGVILWFFAMTQIPLAEVTAMNYLSPVYVTLGAALFLGERL 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+++A ++ IL L++ + +A+ ++A+ F + ++ + V+
Sbjct: 129 AARRVLAIVVAILGALVILRPGFREVSLGHLAMLFTAFSFGASYLMAKNAVEKYGPTVVV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+ +++ + E + ++ L + + A ++ +
Sbjct: 189 AMLSIWVTIGLAPFAWEVWTRPSLQSIGILFAVACFATAGHYSMTLAFANAPMTVTQPVT 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + + +P+D + +++ A+ + +
Sbjct: 249 FLQLVWATLLGTLVFGEPVDIWVVLGGSLIIGAICFITWREAVLKKR 295
>gi|297584709|ref|YP_003700489.1| hypothetical protein Bsel_2421 [Bacillus selenitireducens MLS10]
gi|297143166|gb|ADH99923.1| protein of unknown function DUF6 transmembrane [Bacillus
selenitireducens MLS10]
Length = 303
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 95/294 (32%), Gaps = 14/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + V LWG T L+ Q L + E + R+ +S + + F +
Sbjct: 1 MTKKTAYILVIIGAALWGTTGLFVQQLNAIGFTPWETVGIRLTFSAVLILLFLGIFKPAM 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + + +A FF + L + PV L +F
Sbjct: 61 LRIQLSH----LPYFIGTGIISIAFFNFFFFTVIDEANLSLAVVLLYTGPVFVTILSRLF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
KE + +A L++L + +L ++ + A
Sbjct: 117 FKEPFTGAKGLALFLMLLGCALTVELLPYGTMPDGWRIVLYGLLSGFFYALYSIFGKSVS 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I + ++F ++ + + + ++++G
Sbjct: 177 RHYHSLTITAYSMVTGSVFLMLSSTLLHEPVRLIQPEVLLNGFGIALFATVSAYVLYTFG 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + S I+ P++ I+ V I +++ + + F +V++++ V +
Sbjct: 237 LTYVESSRASILSTMEPVVAIIIGVMIFGDQLNSWQALGFVLVLLSVAVTVYRK 290
>gi|120597482|ref|YP_962056.1| hypothetical protein Sputw3181_0651 [Shewanella sp. W3-18-1]
gi|120557575|gb|ABM23502.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
W3-18-1]
Length = 294
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 114/291 (39%), Gaps = 9/291 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + A +++G T L+++ + +S L++ R + + + I + LSL
Sbjct: 9 GLIELHLAVLMFGGTALFSKLI-PLSALDITFWRCIVAALILALLIKFSRKPLSLE---- 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + I+++HW + A+ + ++F PV++V + ++
Sbjct: 64 -HKHDYLIAIALGIIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLLTGNKIKL 122
Query: 146 LQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +I+ +L+ + ++++ S L +AI + + AR + + +
Sbjct: 123 IDMISGILVFIGVILLIPEANFSNDTTLGIAIGILSAMLFTARNLLQKRYFTQYSGPHAM 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + + L ++ + + +F+ +++ TVG++
Sbjct: 183 FYQTLVAAMFLMPWHETPLNSITLDVWELIILLGIVFTAAPHALFTSALRQLSAKTVGLV 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P + ++ IL + ++ + I+V + + + + K
Sbjct: 243 SCLQPFYGAMLALMILGETLNLNTLLGGTIIVATAIFETHQSHQSLRRKKR 293
>gi|317055750|ref|YP_004104217.1| hypothetical protein Rumal_1057 [Ruminococcus albus 7]
gi|315448019|gb|ADU21583.1| protein of unknown function DUF6 transmembrane [Ruminococcus albus
7]
Length = 294
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/284 (10%), Positives = 88/284 (30%), Gaps = 8/284 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G++ + ++WG + ++ ++ + + R L + I F S
Sbjct: 1 MKNLKGSIMLIITALIWGTAFVAQSKGMDYIGPFTYNALRTLLGGIVLIPVIALFRRSKS 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+T G ++ + A ++T + +I V + +FL
Sbjct: 61 TQKNTPSKTTVKGGILCGTVLFAASSLQQAGIIMTT--AGKAGFVTALYIIIVPVLGLFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKTIPVGSSE 194
+R + I A + ++ + + + AV ++ + ++
Sbjct: 119 GKRPRSVIWICAAGALAGFYLLCIKEDFAVSVGDLLVLAGAVFFAVHIMVIDKFNDMGAD 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G + ++ + L + + + G ++
Sbjct: 179 GMVMACLQFFTAGTIMLICMFIFEKPVLSSISDAKLTILYTGIMSCGVAYTLQILGQRQT 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + ++ + +S IL + + +V A++
Sbjct: 239 EPARATMLMSLESVFAALSGWVILNEKLSPREICGCALVFSAVL 282
>gi|28900612|ref|NP_800267.1| hypothetical protein VPA0757 [Vibrio parahaemolyticus RIMD 2210633]
gi|28808992|dbj|BAC62100.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 294
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 94/291 (32%), Gaps = 16/291 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G F+ + + + + L + V E+++ R L SL + + K
Sbjct: 4 IGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDV--------KRK 55
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L+ + Y++ T + ++ PV + L +FLKER
Sbjct: 56 RISVWGNNKPLLLARGAVGTFALMCVYYSVTTLPLAEATIFQYIHPVFTALLAVIFLKER 115
Query: 143 LNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ I L +L + +M + + + A+ + + V
Sbjct: 116 IQPTTFICIALCLLGVYVMVRPETGVESAQTLPMFSVMIAILGAFGSSIAYVIVRKLSQT 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L + + G++F + ++ T L+ G+ + ++ +
Sbjct: 176 EDSSVIIFYFPLVALPTSILFMGDNFVMPDLYLTCMLVLVGVFTQIGQLGLTKAMQTQQA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + ++ + + I ++V ++ + +
Sbjct: 236 GKASAYSYVQIVFSVLLGIVFFGELPSLWTYIGGALIVAGALINVFGHHLR 286
>gi|146294377|ref|YP_001184801.1| hypothetical protein Sputcn32_3290 [Shewanella putrefaciens CN-32]
gi|145566067|gb|ABP77002.1| protein of unknown function DUF6, transmembrane [Shewanella
putrefaciens CN-32]
Length = 294
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 114/290 (39%), Gaps = 9/290 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + A +++G T L+++ + +S L++ R + + + I + LSL
Sbjct: 9 GLIELHLAVLMFGGTALFSKLI-PLSALDITFWRCIVAALILALLIKFSRKPLSLE---- 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + I+++HW + A+ + ++F PV++V + ++
Sbjct: 64 -HKHDYLIAIALGIIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLLTGNKIKL 122
Query: 146 LQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +I+ LL+ + ++++ S L +AI + + AR + + +
Sbjct: 123 IDMISGLLVFIGVILLIPEANFSNDTTLGIAIGILSAMLFTARNLLQKRYFTQYSGPHAM 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ V + + L ++ + + +F+ +++ TVG++
Sbjct: 183 FYQTLVAAVFLMPWHETPLNNITLDVWELIILLGIVFTAAPHALFTSALRQLSAKTVGLV 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P + ++ IL + ++ + I+V + + + + K
Sbjct: 243 SCLQPFYGAMLALMILGETLNLNTLLGGTIIVATAIFETHQSHQSLRRKK 292
>gi|221199571|ref|ZP_03572615.1| putative membrane protein [Burkholderia multivorans CGD2M]
gi|221205529|ref|ZP_03578544.1| putative membrane protein [Burkholderia multivorans CGD2]
gi|221174367|gb|EEE06799.1| putative membrane protein [Burkholderia multivorans CGD2]
gi|221180856|gb|EEE13259.1| putative membrane protein [Burkholderia multivorans CGD2M]
Length = 309
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + +G ++ ++ V VL ++ R +
Sbjct: 7 SSSAALQGALYVALSAAAFGAMAIFGRYAYAGGVDVLGLLIVRFAIGGTVLAAIA----- 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + ++ A + AL Q L + ++ P L +
Sbjct: 62 -WRRGVVWPRGRALMPLVAMGALGYVGQSFCYFTALRHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A +L + +M +A+A+ + ++ G
Sbjct: 121 WWLGERLTRAKGVALVLCVAGSALMVGGGHGEPFGIALALGAAVVYSLYIVGGTKATRGV 180
Query: 197 FIEMCVLAIPA--------LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I + V F + L + F
Sbjct: 181 DPLATTAIICVSATAALVLIALVRTVAFDAPPRWPATAGGWAAMLAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G++R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVLALVRAG 296
>gi|317485217|ref|ZP_07944098.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
gi|316923508|gb|EFV44713.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
Length = 327
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 98/297 (32%), Gaps = 14/297 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFA---IVYFSGGLSLLKD 83
L +F A +LW + + + + + ++ R+L SL + + + LL
Sbjct: 17 LALFGAVLLWSSSFIALKIAVSAFDPMVMVFGRMLSSLVALMLLRVTVWRRAEAPMLLDR 76
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +++ + ++ F YA++ P+ V + L ER
Sbjct: 77 RVTRREWKYIVLLALCEPCFYFVFEGYAMIYTTASQAGMVVAALPLAVVVAAWLLLGERP 136
Query: 144 NHLQIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ I +L ++ ++ ++ S L + + + Y K + S
Sbjct: 137 HRRVWIGFVLAVVGVVWLSAGSEATESAPNPIFGNFLEVLAMLCGALYVVCAKQLSSRCS 196
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
M L F + + +P L + F ++++ ++
Sbjct: 197 PVLITTMQSLIGLLFFLCLLPLPAVKLPDSFPLLPTLAILYLGVGVTMLSFLLYNFAVRS 256
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S G P+L + + L + + + +V +++ T + K
Sbjct: 257 VPASRTGAFLNLVPVLTLFMGMVFLDERLTAGQWAASALVFGGVILSQWKTAQSEEK 313
>gi|297183029|gb|ADI19175.1| 7 permeases of the drug/metabolite transporter (dmt) superfamily
[uncultured delta proteobacterium HF0130_05G09]
Length = 298
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 92/286 (32%), Gaps = 6/286 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A + + + ++L V ++ R ++ L + + + +
Sbjct: 15 GIGLLLLAVVFFDLMGAVIKYLGDVYPPQQLSFFRNIFGLVPSLLFLAFSESWVKQGRKI 74
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +G+ ++A + +L + + + P+ L + LK ++
Sbjct: 75 IIRQWKLGLFR--GLLIAAAQFCYYLSLRHIEFVIATTISLSGPLFVTLLSAPVLKHKVG 132
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ IA L + +L++ + + C + S +
Sbjct: 133 LIRWIAVFLGFIGILLVVNPDPRIFNWYSLLPLCSAFCYSCTSITAPLFDDSTPTPLMNM 192
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ AL + F G + + + L+L G+ ++ ++ + S +
Sbjct: 193 YTLVGALIGSFLSLFMTGTYTEIVQNQNWLWLFTMGVFGGTGVYLWVSAYRKTEPSNLSP 252
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y + + + + + +++ + +L N
Sbjct: 253 FQYFSIPISFLMGWMFFGEAPFSKLFPGVLLILAGGFLVILHDRRN 298
>gi|49084688|gb|AAT51223.1| PA1060 [synthetic construct]
Length = 302
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 91/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + A LWG + + + ++ L VI R+ A +
Sbjct: 1 MTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFGRMALGSLVFLVAWRWRGR- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +L + +++ +AL + P++ +
Sbjct: 60 -----IDYRPGDWKYLLGLAVCEPCLYFLCESFALQYTSAAQAGMITALLPLLVAVGAWL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTI 188
L ER+ + I L +L + ++L L + +A+ +
Sbjct: 115 LLHERIGRMTWIGFGLAVLGSIWLSLAGEPDLHAPRPLLGNFFELLAMLCATGYTLLLKH 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F + + LF++ S + + ++ + +++
Sbjct: 175 LSARYSAFALTAMQAFVGTLFFLPLALASADLPSQPSALGIQAVVYLGVVVTVGAYGLYN 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+G+ R S P+ +V + L + ++ + + G+V I + + +
Sbjct: 235 FGVGRLPASQASGFINLIPVFTLVFAALFLGETLNGPQMLAAGLVFIGVAISQWRS 290
>gi|42524639|ref|NP_970019.1| transmembrane protein [Bdellovibrio bacteriovorus HD100]
gi|39576849|emb|CAE78078.1| probable transmembrane protein [Bdellovibrio bacteriovorus HD100]
Length = 298
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 98/292 (33%), Gaps = 11/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P + G+L + A + +G ++ ++ +SV E++S+R + ++ ++ F
Sbjct: 5 NPRLRGSLEISVASVGFGFLGIFGKWAFQSGLSVGELLSYRFALAAVLLWIFLLLFRPSW 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + V + A + A+ L + + P F
Sbjct: 65 VRLSV----RQIVIAALLGIFGYAFFSTLYFTAVDGLSITLAALLLYTYPFWVNVFSHFF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT-----IPVGSS 193
+++++ + + + L+++ A+A A +
Sbjct: 121 TQDKISGKEALCLVAASSGLVMLLWGHIEVKNIWAVAAGLGAAISYAIYVLLSGRLQKNV 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V+ AL +++ L +I T L + + +++
Sbjct: 181 RPITSALYVITFGALALSLFHHPHYSAISNLSDIQATSILGLAFVCTIIPLTLELAALQK 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
K + V ++ P+ + I + + V+ + ++ A+V L +
Sbjct: 241 LKSTEVALLMMIEPITAALMGALIFHERLTPVQLLGALVIGAALVTNTLYSR 292
>gi|171321573|ref|ZP_02910507.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria MEX-5]
gi|171093154|gb|EDT38368.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria MEX-5]
Length = 307
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/301 (10%), Positives = 80/301 (26%), Gaps = 6/301 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + L + A +WG + + L+ + R L + + +
Sbjct: 1 MKPEARKHLRANLLMLGAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGAVVLIPLLTFN 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + P + V +LAV + L + F V+ V L
Sbjct: 61 PASREQLAAIRREPALLAPGVALGALLAVSISLQQFGLQYTRIANAGFI-SSLYVVIVPL 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
VF++ R+ ALL + L ++ A
Sbjct: 120 IGVFVRHRIGAGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHFA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + L G L + +
Sbjct: 180 KRHDPLVLAFLQFVTCGALCLAAGLVIEPVSVAMLRSALPTLLYGGLLSVGVGYTLQVIA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A + ++ + ++ L + + + +++ ++ L ++ K
Sbjct: 240 QRDAAPAHAAVIFSMEGVFAAIAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARK 299
Query: 311 N 311
Sbjct: 300 K 300
>gi|153853971|ref|ZP_01995304.1| hypothetical protein DORLON_01295 [Dorea longicatena DSM 13814]
gi|149753353|gb|EDM63284.1| hypothetical protein DORLON_01295 [Dorea longicatena DSM 13814]
Length = 321
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/316 (12%), Positives = 98/316 (31%), Gaps = 13/316 (4%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHR 59
+ + L++ T+ GT LWGI ++ ++ + V+ +++ R
Sbjct: 7 QTTKNNTAQENLTERLERKETVRGTALTIAGGFLWGIAGVFGKYTFEYKGVTATWIVNVR 66
Query: 60 VLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFL 119
++ + + + + + MLV+ +A + A+ +
Sbjct: 67 LIIAGIILLTRAYMVQKD-GIFRIWKNKRHVLRMLVYGVIGIAGCQMTYYLAVEDSNAGI 125
Query: 120 TSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG---------IPLL 170
+ + PV+ + L ++ + +I+A +L +++ H +
Sbjct: 126 ATVLQYTAPVMIMVLLALKNWKLPGKNEILALILAFGGTVLLATHGNLTQLSVSKTTLIF 185
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
L+ AV Y + + +L ++ E
Sbjct: 186 GLSSAVATIFYNLVPGNLMDIYGTFPMVGWGMLISGIGLTPFVRPWTLVEDITWDWQCIG 245
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
++ F + G++ S ++ PL SV + + F
Sbjct: 246 CIVVVIIFGTVMSFSCYMEGVRLIGGSKASLLASVEPLTATAMSVIFMHVAFSGMDLAGF 305
Query: 291 GIVVIAMVVYLLPTVI 306
++ +++ LP
Sbjct: 306 VGIIAGVIILSLPKKK 321
>gi|300721916|ref|YP_003711194.1| hypothetical protein XNC1_0905 [Xenorhabdus nematophila ATCC 19061]
gi|297628411|emb|CBJ88976.1| conserved hypothetical protein; putative membrane protein
[Xenorhabdus nematophila ATCC 19061]
Length = 321
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 88/282 (31%), Gaps = 20/282 (7%)
Query: 34 YILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
I+WG T + +F+ + L + S R +++ + + + G + +
Sbjct: 18 SIIWGGTFIAGRFISFDIGALLLASLRFIFAAVVLVLILFFSKKGFVKINKNQ----MMK 73
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
++ + V+ F Y L S + PV+ F +ERL + + +
Sbjct: 74 IIFLGFFGIYVYNICFFYGLKYIDASRASLIVAINPVVIAIFSYFFFRERLPAISVGGII 133
Query: 153 LIILSLLIMT----------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L +L + + + + S ++ + G +
Sbjct: 134 LCLLGAGFVIVSNNPLLLESGNGSMIGDISILGCVISWVIYSVFCKKTVNEIGALHTVAY 193
Query: 203 LAIPALFYVVWNGFSGGEHFFL-----GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + GE + + ++ + ++ GI + +
Sbjct: 194 SVLAGAIMLTVTVLVTGEMNQTALSLLSFSDLISLIYLGVVGSAIAYILYYDGIDKIGAT 253
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+ PL ++ + L + + T + ++ + +
Sbjct: 254 RAGVFIALNPLTAVLGGMLFLGEKLTTTIFMGAVFIIAGIFI 295
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 38/137 (27%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
+ + L I F + A+ V+ FS +
Sbjct: 9 MSYMKLTIVSIIWGGTFIAGRFISFDIGALLLASLRFIFAAVVLVLILFFSKKGFVKINK 68
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+ F YG+K S ++ P+++ + S F ++ + +
Sbjct: 69 NQMMKIIFLGFFGIYVYNICFFYGLKYIDASRASLIVAINPVVIAIFSYFFFRERLPAIS 128
Query: 287 TIVFGIVVIAMVVYLLP 303
+ ++ ++
Sbjct: 129 VGGIILCLLGAGFVIVS 145
>gi|301308751|ref|ZP_07214703.1| putative integral membrane protein DUF6 [Bacteroides sp. 20_3]
gi|300833275|gb|EFK63893.1| putative integral membrane protein DUF6 [Bacteroides sp. 20_3]
Length = 321
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 102/314 (32%), Gaps = 22/314 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G L + A IL+ I +++L E V + S R+ ++ + ++
Sbjct: 2 MNQEKLKGHLLILAANILFAINMPVSKYLLPEHVQPEALTSMRMSFACVMFWITSLFVPY 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LKD + + + + ++ G FI+ L T S P+ + L +
Sbjct: 62 EKVPLKD------LGLLCLCALCGVGLNQGLFIWGLNTTSPVDASIIATAVPIFVMILAA 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ LKE + ++ LL I + + L S G S +I + S+
Sbjct: 116 LILKEPITRMKTFGVLLGICGAISLILQSTQGSNQASSLGGNLLITVSGFMYSIYLVVSK 175
Query: 195 GFFIEMCVLAIPALFYVV------------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
++ + + ++
Sbjct: 176 PLTLKYSSVTMMKWMFLFSTLITLPFAIESIWNTPAFHKEVFDGQELGAIFFVLFGATFV 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + +KR + +TV + Y P++ +VFI + + + +V + +
Sbjct: 236 PYLLIPLALKRIRPTTVSMYNYIQPIVASFIAVFIGQDSFSVTKLVSAALVFSGVYLVTQ 295
Query: 303 PTVINSGKNKTKKS 316
+ + +S
Sbjct: 296 SKSRADLEQQNSQS 309
>gi|303230448|ref|ZP_07317209.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
gi|302514987|gb|EFL56968.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
Length = 313
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/302 (10%), Positives = 85/302 (28%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+G + WG++ QFLE ++V ++ R+L + + Y
Sbjct: 1 MEEKQWIGMGLAIMGALFWGLSGTSVQFLENAKHLNVEWLLEVRLLL-AGLLTILLSYIQ 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G+ + +L+F +A+ + A++ + + +V P + +
Sbjct: 60 DGIRIFDIFKNPKDFGKLLIFGLFGIALAQYSYFKAIVISGVGVATVLQYVAPTLLIIYL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTI 188
+ ++ + LL + + + G+ + + S + + I
Sbjct: 120 FLRYFKKPTPAEFCCVLLALTGTICIVSQGGLDISTINGDALFWGLISAASICVYTLQPI 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + V + + L F +
Sbjct: 180 ELLKKYSTTSIVGVAMFICGILSLAMFQQIDSEAIWDGMTWVGLFTIIILGTVVSFNAYI 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G++R I+ P+ + +L V ++ + +
Sbjct: 240 EGVRRIGAVQGSILSSLEPISAALFGWALLGNEFTLVGIFGMICIIATVFIIAWDRQRQI 299
Query: 309 GK 310
+
Sbjct: 300 KR 301
>gi|15964780|ref|NP_385133.1| hypothetical protein SMc02371 [Sinorhizobium meliloti 1021]
gi|307309667|ref|ZP_07589319.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
gi|307319464|ref|ZP_07598891.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|15073958|emb|CAC45599.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306894836|gb|EFN25595.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|306899879|gb|EFN30502.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
Length = 312
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 15/304 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M G + + +++ + + + ++ +R +++ + +
Sbjct: 7 SPMKGIVLKVLSVVVFVCMSTCIKAAGDDIPTGQITFYRSAFAMVPILGFLACRGALRDA 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ T V + + Y L+ + P+++V ++FL
Sbjct: 67 FRTTDITGHLVR-----GFVGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFLG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + A + + + I+T G A+AV SA A + V
Sbjct: 122 EIVRLYRWSAVFVGLAGVFIITWPRLTLFNEGGFGSAEAMGAVAVLLSAALGATAMVLVR 181
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ +L V++ + + + + L G + +
Sbjct: 182 KLVQKERTHTIVLYFSLSAAVFSLATLPFGWSELSWQAFVLLTIAGFCGGVGQILLTESY 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ A +ST+ EYT+ +L IV F+ IVV A + + +
Sbjct: 242 RHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHRLGLER 301
Query: 312 KTKK 315
K +
Sbjct: 302 KGAR 305
>gi|159042636|ref|YP_001531430.1| hypothetical protein Dshi_0080 [Dinoroseobacter shibae DFL 12]
gi|157910396|gb|ABV91829.1| protein of unknown function DUF6 transmembrane [Dinoroseobacter
shibae DFL 12]
Length = 328
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 93/289 (32%), Gaps = 7/289 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L A+ ++ + + + L + +++ VL+S P ++
Sbjct: 4 SSNLKGALLGLAAFAVFAVHDVVVKTLGGSYTPFQIVFFGVLFSFPLTTVMMM------R 57
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
P+ + + YA F +P++ L L
Sbjct: 58 EKAHGNLRPRHPWWIALRTGAAVITGLTAFYAFTVLPLAQVYAILFASPLLITVLSIPIL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A ++ ++ ++++ + L +A +A A ++ V
Sbjct: 118 GETVRLRRWLAVIVGLIGVVVVLRPGAVDLTLGHVAALTAAVGGALASVVVRKVGREERS 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L P + V + + D + L + + + + +
Sbjct: 178 VVLLLYPMVANFVLMACLMPFFYRPMPVGDLAAVGLMAALGFGASLLLIAAYRAGEAAII 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
M+Y+ L + + + ID + IV+ + + + +S
Sbjct: 238 APMQYSQILWASLFGFVLFGEGIDLNTALGAAIVIASGLYIVARESRSS 286
>gi|71735996|ref|YP_276121.1| hypothetical protein PSPPH_3988 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556549|gb|AAZ35760.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320325530|gb|EFW81592.1| hypothetical protein PsgB076_05865 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320327183|gb|EFW83197.1| hypothetical protein PsgRace4_25601 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 298
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 113/297 (38%), Gaps = 9/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + A ++ G L+ S + + R L + I Y +
Sbjct: 4 KNQSQGVIQLSLAMLISGTIGLFVVE-SGQSAINAVFFRCLIGGGVLLAYIFY----KKM 58
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK + + K V L+ + ++W + L + Y V P + F G++FL+
Sbjct: 59 LKASYFSKKNVVCLLVIGCSIVINWVTLFNSYTHISIGLATTIYHVQPFLVFFGGALFLR 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT----WSAYCFARKTIPVGSSEGF 196
E L+ +++ + +L++ G S + ++A+ +A TI +
Sbjct: 119 ESLSKHRLVYVCIAFAGVLLIVNPGGESQDSNYLVGCGLALFAAFFYAVATIATKKMDKI 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ L+ A+ VV + + + +L L + ++ ++ + ++
Sbjct: 179 PPHIVALSQMAIGVVVLLPLANFDKLPSTAVQWSLVLTLGVVHSAIMYIMIYSAYQKLPT 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S + ++ Y PL+ + + +++++ + +++ + ++ L K K
Sbjct: 239 SKIAVLGYVYPLMAVAVDYLYFGRALNSLQVLGGVMIIFSGLMGTLNANPFVRKTKA 295
>gi|116048989|ref|YP_792209.1| hypothetical protein PA14_50670 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115584210|gb|ABJ10225.1| hypothetical protein PA14_50670 [Pseudomonas aeruginosa UCBPP-PA14]
Length = 301
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 92/296 (31%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + A LWG + + + ++ L VI R+ A +
Sbjct: 1 MTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFGRMALGSLVFLVAWRWRGR- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ +L + +++ +AL + P++ +
Sbjct: 60 -----IDYRSGDWKYLLGLAVCEPCLYFLCESFALQYTSAAQAGMITALLPLLVAVGAWL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTI 188
L ER+ + I L +L + ++L L + +A+ +
Sbjct: 115 LLHERIGRMTWIGFGLAVLGSIWLSLAGEPDLHAPQPLLGNFFELLAMLCATGYTLLLKH 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F + + LF++ S + + ++ + +++
Sbjct: 175 LSARYSAFALTAMQAFVGTLFFLPLALASADLPSQPSALGIQAVVYLGVVVTVGAYGLYN 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+G+ R S P+ +V + L + ++ + + G+V I + + +
Sbjct: 235 FGVGRLPASQASGFINLIPVFTLVFAALFLGETLNGPQMLAAGLVFIGVAISQWRS 290
>gi|170759516|ref|YP_001786550.1| hypothetical protein CLK_0602 [Clostridium botulinum A3 str. Loch
Maree]
gi|169406505|gb|ACA54916.1| UAA transporter family [Clostridium botulinum A3 str. Loch Maree]
Length = 293
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + +FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKSIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAVLCWASYGVFSKKVMPRYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 ITLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYISILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ IV S IL + I + + +++ + +
Sbjct: 243 IGPSKTSIFVNLVPISSIVLSSMILGEKITIITLLSTALIIAGVYI 288
Score = 39.1 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 39/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + L
Sbjct: 4 SRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKSIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|163743335|ref|ZP_02150715.1| membrane protein [Phaeobacter gallaeciensis 2.10]
gi|161383329|gb|EDQ07718.1| membrane protein [Phaeobacter gallaeciensis 2.10]
Length = 311
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 2/305 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIV 72
+ K S A L+ + V E + R +++P + +
Sbjct: 1 MVKSLTSHQPGRAIALKVAAIALFTGLSAIIKATSDVVPAGEAVFFRSFFAIPVILIWLT 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
LK T + ++ + + G + L + F + ++
Sbjct: 61 LRGELPRGLKTTRPGGHFLRGILGTTAMGMTFMGLGMLPLPEVTAIGYATPIFTLILAAL 120
Query: 133 FLGSVFLKERLNHLQI-IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
LG R++ + I + +L++L + + + G AI + + I +
Sbjct: 121 LLGERIRLIRISAVTIGLIGVLVMLWPRLGSGNLGDTATLGAILILIATVARGLVQIHIR 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ +L + + + + + LI GL+ + +
Sbjct: 181 RMVMTEHTAAIVFYFSLTASILSLCTLPFGWVWPDPVTLALLISAGLVGGVAQILVTSSY 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ A S + +Y++ L I+ + V I G+V+ V+ + +
Sbjct: 241 RFAPASMLAPYDYSSMLFAILLGYIWFNELPTLVMLIGAGLVIAGNVLVIWRESRLGLER 300
Query: 312 KTKKS 316
+S
Sbjct: 301 GKARS 305
>gi|146276630|ref|YP_001166789.1| hypothetical protein Rsph17025_0578 [Rhodobacter sphaeroides ATCC
17025]
gi|145554871|gb|ABP69484.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17025]
Length = 305
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 97/302 (32%), Gaps = 8/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + T+ G L++ + + + +T + + + R + + + ++
Sbjct: 6 ADASRTRTLEGVLWMLASGLSFVAVTGIVRYLGTDIPAAQGAFLRFAFGVLFLLPTLI-- 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ P A+ + + + YA+ + ++ PV+
Sbjct: 64 -----PVLRGGFPPGALKVYSLRGLVHTFAVICWFYAMARIPVAEVTAIGYLNPVLVTLG 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++F ERL +++A + ++ LI+ L S ++ +A FA +
Sbjct: 119 AALFFAERLALRRVLAVAVALVGALIVLRPGLRELSSGHLSQLGAASFFAVSYLLARRLS 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++A+ +L V + L+L + + + A
Sbjct: 179 DVAGAGAIVAMLSLTVTVGLLPFALLVWVPVGATQLLWLALVAVFATLGHYCMTRAFAAA 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
L+ + + + + + ID + GI++ A+ + +
Sbjct: 239 PLTVTQPVTFLQLVWATLLGALAFGERIDPFVLLGGGIIISAITYITWRESVLKRRASAS 298
Query: 315 KS 316
+
Sbjct: 299 IA 300
>gi|126729304|ref|ZP_01745118.1| hypothetical protein SSE37_23929 [Sagittula stellata E-37]
gi|126710294|gb|EBA09346.1| hypothetical protein SSE37_23929 [Sagittula stellata E-37]
Length = 310
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 93/304 (30%), Gaps = 8/304 (2%)
Query: 8 KEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPG 66
+ K + + +G ++ + + + L + +E R L L
Sbjct: 4 PDREKHVVSMEQTARPGVGIFWMAVTGLCFVGVTALVKALGDRIPAVEAAFLRYLLGLVF 63
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
+ L++ + G+ + + V + YA+ + ++
Sbjct: 64 LAPM-------WRDLREATLTRRLWGLFLLRGIMHTVGVALWFYAMTRIPIAEVTAMNYL 116
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK 186
PV L FL ERL ++ A + ++ +++ L A+ +A FA
Sbjct: 117 NPVYVTVLAVFFLGERLAVRRVAAIIAALVGAMLILRPGFRELDPGHYAMLVTALVFAGS 176
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ V+A+ +L V + + L +
Sbjct: 177 YLLAKILSSEVRPAVVVAMMSLTVTVGLAPMAFAVWVWPTWGELAVLFCVACFATGGHYA 236
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A ++ + + + ++ +P+D ++++A++ +
Sbjct: 237 MTLAFVEAPVTVTQPVTFLQLVWSVLIGAMFFAEPVDLWVVGGGSVIMLAVIFITWREAV 296
Query: 307 NSGK 310
+
Sbjct: 297 LKRR 300
>gi|304439039|ref|ZP_07398958.1| membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372398|gb|EFM25985.1| membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 299
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 92/297 (30%), Gaps = 10/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G L+ WG++ +L + L++ ++R+L + + I+
Sbjct: 1 MKNKNLKGYLYTLLGATFWGLSGTCAYYLMNDRSIPPLDLSTYRMLIAGSIMLIYILI-K 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G L+ ++ FS +A ++ + + + V+ V L
Sbjct: 60 NGKEALRVFTNLKDTFVLISFSIFGMAAMQVTYLITISYTNAPTATVLQYTGIVMIVVLV 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIP 189
V + + + IL + I L + ++ A P
Sbjct: 120 CVLETRLPYRAEGFSIIFAILGTFFLATRGNIHTLVISNEGLLYGGLSAVAMMIYTLVPP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ I + LA ++ + ++ F+ + ++
Sbjct: 180 KLLKKYGTINITALATFISGVMMILVSRPPIPEKIDSLIILAFMGLTFFGTIISYTLYFE 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
G+ ++ P+ ++ S+ +L + + + ++ A+ + + +
Sbjct: 240 GLSIIGPVKTSLIACVEPISALLFSMVLLGEHFVFMDFVGIMCILFAVAILSIKDLW 296
>gi|160946358|ref|ZP_02093567.1| hypothetical protein PEPMIC_00318 [Parvimonas micra ATCC 33270]
gi|158447474|gb|EDP24469.1| hypothetical protein PEPMIC_00318 [Parvimonas micra ATCC 33270]
Length = 295
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 102/303 (33%), Gaps = 10/303 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ + + +G +F+ + + + ++ + ++++ + R L I+
Sbjct: 1 MVDNSRNKNFKLGIIFMIISTLGFSFMQIFVKLTSGKFTLMQQVFMRNFVMLIICVVYIL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K K + I YA+ +P+ V
Sbjct: 61 IRGSSFLGEKRNRKLLLMRSAFGYMGVIF------NFYAINHMIVADAGILQRTSPIFVV 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ KE+ + + + + + L A+ SA + + V
Sbjct: 115 LIACFLFKEKFTLERFLTLTFSFIGAIFVVRPQFNSRLFPAMVAMSSALSASIAYMCVSK 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ I +LF + + ++ + ++ ++LI G+ ++ + +
Sbjct: 175 IGKAEKTETIIFIFSLFSTICSFPFIFKNLNIPDLKIFIYLILIGVASAVGQFGLTISYQ 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A S V I Y + +++ IL + + I ++ + L+ +INS KNK
Sbjct: 235 YANASEVSIFNYLGIVFVVILGKVILDESVSIYSLIGIVLIFS---MSLMSYIINSRKNK 291
Query: 313 TKK 315
KK
Sbjct: 292 EKK 294
>gi|323697654|ref|ZP_08109566.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
ND132]
gi|323457586|gb|EGB13451.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans ND132]
Length = 294
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 89/288 (30%), Gaps = 2/288 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L+V A +WG+ ++T+F+ E VS LE+ R ++ +
Sbjct: 1 MAGFLYVLAAAFMWGVIGVFTKFVLAEGVSALEIAFWRAMFGWVFFMIHATVAGQLKAQR 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
KD + V + + T+ ++ V + + +
Sbjct: 61 KDLPALLGFGVICVTLFYGAYQIAIRDVGMAMAAVLLYTAPAWVALLSKLVLKEEMTVVK 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I + I + + I L +A + G +
Sbjct: 121 AACVAMTILGVACISLGPKLMSGAAIQLNLFGLAAGLLSGFTYALYYIFGKKFLYRYPTP 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + AL + + L + + + F ++ G+KR + +
Sbjct: 181 TIFVYALPFGAILLLPFIDFVHKSPTAWLLMIGMALVTSYGAFSVYYAGLKRLDATHASV 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ PL+ V + + + + +++ A+++ +L
Sbjct: 241 IATFEPLVAAVLAYLLFGEQFSLLGYAGSSLIIAAVLLVVLSGSRPRK 288
>gi|303251023|ref|ZP_07337209.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252683|ref|ZP_07534575.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|302650033|gb|EFL80203.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306859859|gb|EFM91880.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 297
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 119/294 (40%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L +S + R++ +LP +FFAI
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ ++TI+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KRLKQQPHLILVILITSTIVGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVAFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + AY R+ + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPAYFHIRRKFQLSNIYSFVFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + N F+ +++ ++ + +G
Sbjct: 183 MCLIPISLYFIW---NTDMDFIHAQNPNIYYFIAILSVVSGSALLSYTLASTILPFNVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|288962786|ref|YP_003453080.1| uncharacterized transporter [Azospirillum sp. B510]
gi|288915052|dbj|BAI76536.1| uncharacterized transporter [Azospirillum sp. B510]
Length = 337
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/319 (10%), Positives = 95/319 (29%), Gaps = 16/319 (5%)
Query: 2 GKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHR 59
G + + ++ + + G + + + P+ + V + +I R
Sbjct: 17 GPSSDAVPFEARGTRPLPPVHVLAGLGLAVAGVVAFSLRPVIIKLAYRYDVDPVTLIMLR 76
Query: 60 VLWSLPGVFFAIVY-----FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLT 114
++++LP ++ +G + + + + T L
Sbjct: 77 MVFALPFFLGMALWPQLGKAAGKAAAERAPVAGRDLALTVALGVTGYYAASFCDFLGLRY 136
Query: 115 RQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI 174
+ F+ P I V L ++FL +R+ +++A ++ + ++ +
Sbjct: 137 VTAGMGRLLLFLYPTIVVVLSALFLGKRIGLREVVALVVSYAGVALVVWSEIGTGHPDFM 196
Query: 175 ---------AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
A +S Y + F + A + +
Sbjct: 197 TGAALVFMGAFLYSVYLVGSSRVVQRVGSMRFTAHAMTAACLCCILQFLLLRPLSALDQP 256
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
L + + + ++R + V + P+ + +L +P+ +
Sbjct: 257 LPVYGLSAVMAVACTVLPVLMTAEALRRVGPNLVALCGAIGPVAAAIFGYLLLAEPMGWL 316
Query: 286 RTIVFGIVVIAMVVYLLPT 304
+ + V +++ L
Sbjct: 317 QLAGAALTVAGVMIISLWR 335
>gi|238061546|ref|ZP_04606255.1| hypothetical protein MCAG_02512 [Micromonospora sp. ATCC 39149]
gi|237883357|gb|EEP72185.1| hypothetical protein MCAG_02512 [Micromonospora sp. ATCC 39149]
Length = 351
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 93/305 (30%), Gaps = 11/305 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + A+L + + A +WG + L+ + + ++ + + +RV + A+
Sbjct: 30 TTPDRAALRSWLPGFLALAA--IWGSSFLFIKVGVRELHPVHLTLYRVAAGALTLLVALP 87
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS--FSYFVTPVI 130
L T + V L + +G + + + V+
Sbjct: 88 LLRDRLPREPRTWAHQFVVAALGVAVPFTLFGYGEQRIESMLAGIWNATTPLIVLPMAVL 147
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKT 187
+ ++ + A +L++L + + G + A A A + ++
Sbjct: 148 VFRTERLTTRKAVGLGLGFAGVLVVLGVWAGVGGAHFAGQLMCFGAAACYGFAIPYQKRF 207
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGF---SGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + G + L + V + L L L F
Sbjct: 208 VAGSAHSGLSLSAAQLVLATAQLAVVGPLVAGAPPVPTDLSGGALASVLALGALGTGLAF 267
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I I+ A ST + Y P+ ++ L + + + + IV+ + V
Sbjct: 268 VINLRNIRVAGASTASTVTYLIPIFAVLLGALALGERLTWHQPVGALIVLAGVAVTQGLL 327
Query: 305 VINSG 309
Sbjct: 328 GRRRR 332
>gi|154247471|ref|YP_001418429.1| hypothetical protein Xaut_3544 [Xanthobacter autotrophicus Py2]
gi|154161556|gb|ABS68772.1| protein of unknown function DUF6 transmembrane [Xanthobacter
autotrophicus Py2]
Length = 334
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 14/304 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+ + G A + + + + V E++ R L V + +
Sbjct: 6 SDLPQMNVPAGIGLQIAATFFFAVMSALVRMVADEVPSGEIVFARSFIGLLPVVVWLAWS 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L V + AL + TP+++V L
Sbjct: 66 GRMTGALVTRQ-----PFGHVVRGLVGVSAMWLSFAALAFIPLAEAVAFSYATPLVAVVL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARK 186
+V L ER+ + + + + +++M SG L A A
Sbjct: 121 AAVLLGERVPAYRWLVLAIGMGGIVLMLWPSFSHASVGSGPGPLIGAGLALAGAVGAGFA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
V ++ +L V + + + + L L G GL
Sbjct: 181 ITQVRHLTRTETSEAIVFYFSLVASVAGLATLPLGWVMPDGRVALILAGMGLAGGIGQIC 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ I+ A S V + Y + V + + + + +V++A +V +
Sbjct: 241 VTSAIRHAPASVVAPLNYATLIWATVLGIILFGEWPAPLVIAGAMVVIVAGLVLIWRERR 300
Query: 307 NSGK 310
+ +
Sbjct: 301 PAPR 304
>gi|169633036|ref|YP_001706772.1| hypothetical protein ABSDF1311 [Acinetobacter baumannii SDF]
gi|169151828|emb|CAP00657.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii]
Length = 304
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 102/286 (35%), Gaps = 9/286 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ L +GTL + A +L G L+ S + ++ R L S + ++
Sbjct: 6 DDHHLKRKVGTLEMVVAMLLSGSIGLFV-IKSGQSPINIVFFRCLISALCLIPICYFYGH 64
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ K + ++V S ++ +W A L + Y V P + +FLG+
Sbjct: 65 FRKV----YFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLGA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ E+LN ++ ++ + L+++ + S +
Sbjct: 121 LVFHEKLNKNDVLWTIIAFIGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITKK 180
Query: 197 FIEMCVLAIPALF----YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L I + +V F + L +F++ + IK
Sbjct: 181 LSNTPPLLIVFIQTLSGAIVMAPFISVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ L+ + I+ + P+ IV F + + + + G++++ ++
Sbjct: 241 KIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVL 286
Score = 36.4 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 7/146 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
GL + + ++G V A L+ I+ L T+ L L ++ + L + I
Sbjct: 147 GLGSASVNSNELVGLGLVLIATTLYSISVLITKKLSNTPPLLIVFIQTLSGAIVMAPFI- 205
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S+ ++ + + ++ A + A+ + F+ P+ ++
Sbjct: 206 ------SVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIKKIPLNNIAILSFIYPISTI 259
Query: 133 FLGSVFLKERLNHLQIIAALLIILSL 158
+ F L Q++ A LI+L +
Sbjct: 260 VIDYFFFDHVLTSTQVLGAGLILLGV 285
>gi|218294785|ref|ZP_03495639.1| protein of unknown function DUF6 transmembrane [Thermus aquaticus
Y51MC23]
gi|218244693|gb|EED11217.1| protein of unknown function DUF6 transmembrane [Thermus aquaticus
Y51MC23]
Length = 277
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 101/279 (36%), Gaps = 10/279 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MG L++F A LWG+ ++ E + L V +R + + + L +
Sbjct: 1 MGYLYLFLAAFLWGLLGPVSRLAFGEGLPPLLVALYRAVIAWAFFALHALILRQVRLLPQ 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D + +F +++ +G + A+ L S + P L + LKE
Sbjct: 61 D------LPALFLFGLVGVSLFYGSYQLAVNYGGAALASVLLYTAPAFVALLSRLVLKEA 114
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLS--LAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ L ++A L +L + +M L G + + A+ + G
Sbjct: 115 LDALGLLAVALTLLGVGLMGLGGGSQVKALLPALFFGLLSGFTYALYYIFGKLYLPRYAT 174
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + AL + L L + + G++R +
Sbjct: 175 PTLFLYALPVGALGLLPFVDFVPLSQKALWALLFLGAFSTYGAYLAYYAGLRRLPATRAS 234
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P++ + + + ++ + + + G++++A+++
Sbjct: 235 VLATLEPVVANLFAFLLFREVLSPLGYLGAGLILLAVLL 273
>gi|309390035|gb|ADO77915.1| protein of unknown function DUF6 transmembrane [Halanaerobium
praevalens DSM 2228]
Length = 295
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 100/296 (33%), Gaps = 10/296 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G F+ + + + + +FL + E I R L +F A+ S L
Sbjct: 3 NRKKGITFILLSSLFFALMAATVKFLGDMPTAEKIFFRNLIG---IFIALTLVKKTGSSL 59
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K +LV + + + YAL + ++P + S+FLKE
Sbjct: 60 VGNNKK-----LLVLRSLFGLLGIAAYFYALANMKLSDAVILNKMSPFFVMIFASIFLKE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ QI+A + +++ + A+ S+ V
Sbjct: 115 NITKKQIMALITAAFGAILVIRPGFDSNIFPALIALTSSILAGVSYTVVRQLRKTDSAPT 174
Query: 202 VLAIPALFY-VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ +LF + F F + +I + L+ GL + + + A+ +
Sbjct: 175 VVFYFSLFSTLAMIPFMLKGSFVIPSISQAIALLSLGLFAAAAQLFMTNAYRHAEAGELS 234
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV-YLLPTVINSGKNKTKK 315
I Y + + + I ++ D +++ A + Y N+ K + KK
Sbjct: 235 IYTYANIVFSTIFGLVIFQEIPDIFSIFGALLIISAGYLNYRAKEKENAEKLRLKK 290
>gi|310829279|ref|YP_003961636.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
gi|308741013|gb|ADO38673.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
Length = 290
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 98/289 (33%), Gaps = 12/289 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L A +++G L+ + L + ++ R L +F + GLS +
Sbjct: 6 LLFALAMLIFGSIGLFVRTL-PFTSSQIALARGLIGSAFLFASSFILKKGLSFKRIQSNL 64
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + +L +W A + SY+ PVI + L V KE L
Sbjct: 65 KVLLPL----GIMLGFNWILLFQAYRYTSIANATVSYYCAPVIVMLLTPVVFKESLTRTN 120
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTW------SAYCFARKTIPVGSSEGFFIEMC 201
++ + ++ ++ G I + + + F
Sbjct: 121 VLCIFAAMAGMVCISGAGGTLDRQNLIGIAYGFGGAVFYAAIVLTNKFLKDISDFESAFT 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKLSTVG 260
L I AL + + + G + + LI + F + ++ + R T+
Sbjct: 181 QLFIAALALLPYVLLTDGIRLTGASAVTVMLLILVGVVHTGFSYLLYFASLPRLDSRTIA 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y P+ I+ S L +P+ ++ +++ A +V L + N+
Sbjct: 241 TFSYIDPISAILLSSLFLAEPMTLIQAAGAVLILGATLVNELIGMRNAR 289
>gi|15596257|ref|NP_249751.1| hypothetical protein PA1060 [Pseudomonas aeruginosa PAO1]
gi|218892977|ref|YP_002441846.1| hypothetical protein PLES_42621 [Pseudomonas aeruginosa LESB58]
gi|254234197|ref|ZP_04927520.1| hypothetical protein PACG_00031 [Pseudomonas aeruginosa C3719]
gi|254239418|ref|ZP_04932740.1| hypothetical protein PA2G_00031 [Pseudomonas aeruginosa 2192]
gi|9946975|gb|AAG04449.1|AE004538_1 hypothetical protein PA1060 [Pseudomonas aeruginosa PAO1]
gi|126166128|gb|EAZ51639.1| hypothetical protein PACG_00031 [Pseudomonas aeruginosa C3719]
gi|126192796|gb|EAZ56859.1| hypothetical protein PA2G_00031 [Pseudomonas aeruginosa 2192]
gi|218773205|emb|CAW29017.1| hypothetical protein PLES_42621 [Pseudomonas aeruginosa LESB58]
Length = 301
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 91/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + A LWG + + + ++ L VI R+ A +
Sbjct: 1 MTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFGRMALGSLVFLVAWRWRGR- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +L + +++ +AL + P++ +
Sbjct: 60 -----IDYRPGDWKYLLGLAVCEPCLYFLCESFALQYTSAAQAGMITALLPLLVAVGAWL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTI 188
L ER+ + I L +L + ++L L + +A+ +
Sbjct: 115 LLHERIGRMTWIGFGLAVLGSIWLSLAGEPDLHAPQPLLGNFFELLAMLCATGYTLLLKH 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F + + LF++ S + + ++ + +++
Sbjct: 175 LSARYSAFALTAMQAFVGTLFFLPLALASADLPSQPSALGIQAVVYLGVVVTVGAYGLYN 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+G+ R S P+ +V + L + ++ + + G+V I + + +
Sbjct: 235 FGVGRLPASQASGFINLIPVFTLVFAALFLGETLNGPQMLAAGLVFIGVAISQWRS 290
>gi|307261528|ref|ZP_07543197.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|306868811|gb|EFN00619.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 297
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 118/294 (40%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L +S + R++ +LP +FFAI
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ ++ I+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KRLKQQPHLILVILITSAIIGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVAFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + AY R+ + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPAYFHIRRKFQLSNIYSFVFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + N F+ +++ ++ + +G
Sbjct: 183 MCLIPISLYFIW---NTDMDFIHAQNPNIYYFIAILSVVSGSALLSYTLASTILPFNVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|190891461|ref|YP_001978003.1| hypothetical protein [Rhizobium etli CIAT 652]
gi|190696740|gb|ACE90825.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
Length = 293
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 5/290 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +F A ++ + ++ L + V R GGL T
Sbjct: 7 GYIFALLAITIFSLQDAISKHLASTYPPIFVTMIRYWAFALFTIVLASKMRGGLKATART 66
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + +LAV I + + TP++ L L ER+
Sbjct: 67 KRPL----LQLVRGVLLAVQVVLAITCFAVIGLARSQAIFSATPILIALLSMPILGERVG 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A + + +L++ G + S + FA I + M
Sbjct: 123 WRRWTAIGVGLFGVLLILKPEGEFFDVKLLLAILSCFNFAFYVIATRLASRDDSSMTSFF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + G ++ ++ D ++ + + + V + Y
Sbjct: 183 YTGVIGAITMTVIGPFYWSWMSVGDWGWMALVCMTSISSHYFLIRAYDLLDAAAVQPLTY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + V I + + I IVV A + + + +
Sbjct: 243 LSLVYASIIGVTIYDETLSLNTIIGSIIVVAAGIFTIWREHVVGRRAAAA 292
>gi|119385151|ref|YP_916207.1| transporter DMT superfamily protein [Paracoccus denitrificans
PD1222]
gi|119374918|gb|ABL70511.1| RarD protein, DMT superfamily transporter [Paracoccus denitrificans
PD1222]
Length = 303
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 64/293 (21%), Positives = 123/293 (41%), Gaps = 9/293 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + WG++P++ + L V +EV++HR +WSL + L
Sbjct: 6 KGFWAMIAVCVTWGLSPIFYRALAGVPTVEVLAHRTIWSLALFLVVLGAQGRLGQLRAA- 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
V + +A ++ +WG FI+A+ +S Y++ P+ +V G + E L
Sbjct: 65 -LTGAVVRRIALAALTISANWGLFIWAVQAGHVVQSSLGYYIFPLAAVMTGVLVFGESLT 123
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSEGFF 197
+Q +A LL +L+++++T G+ + + V +
Sbjct: 124 RVQAMAILLAVLAVVLLTWGLGVAPWISLGIALTFVLYGALKKSLPLGPVLSVAAEVALL 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + A + F N+P TL LI G + + +FSY +R +++
Sbjct: 184 APLALGWLIAQALGLMPAPLAQPLGFGANLPVTLLLIASGAITAVPLILFSYAARRIEMA 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TVG+M Y P L + +V + + T I F ++ A+ VY + S +
Sbjct: 244 TVGLMFYLNPTLQFLCAVLLFGETFTTWHMIAFAMIWAALAVYSASALRQSRR 296
>gi|107026855|ref|YP_624366.1| hypothetical protein Bcen_4511 [Burkholderia cenocepacia AU 1054]
gi|116691950|ref|YP_837483.1| hypothetical protein Bcen2424_3853 [Burkholderia cenocepacia
HI2424]
gi|105896229|gb|ABF79393.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia AU 1054]
gi|116649950|gb|ABK10590.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia HI2424]
Length = 309
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/303 (10%), Positives = 82/303 (27%), Gaps = 6/303 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + + + L + A +WG + + L+ + R L + ++
Sbjct: 1 MPMKPDARKHLRANLLMLGAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLM 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + L + P + + +LAV L + F V+ V
Sbjct: 61 VNAASRAQLAAIRREPALLLPGLALGGLLAVSISLQQVGLQYTRIANAGFI-SSLYVVIV 119
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTI 188
L + R+ ALL + L ++ A
Sbjct: 120 PLMGALARHRIGAGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGH 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + A+ + + + L G L + +
Sbjct: 180 LAKRHDPLVLAFLQFAVCGVACLAVGLAVEPVSAAMLRGALPTLLYGGLLSVGVGYTLQV 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ A + ++ + ++ L + + + +++ ++ L ++
Sbjct: 240 VAQRDAAPAHAAVIFSMEGVFAAIAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDA 299
Query: 309 GKN 311
K
Sbjct: 300 RKK 302
>gi|291563500|emb|CBL42316.1| Predicted permease, DMT superfamily [butyrate-producing bacterium
SS3/4]
Length = 294
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 94/302 (31%), Gaps = 16/302 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
++ + ++ ++ + ++WG + + ++ + +++ R S +
Sbjct: 1 MNNLSERSIKILASMGLILTTMIWGFAFVVMKNSVDVIPPTYLLAVRFSMSAVLLALLF- 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + V V L + + F Y L +F + +I
Sbjct: 60 -------HKNMMKADRETVLCGVILGAFLCLSYQFQTYGLKHTTASKNAFITTLYVIIVP 112
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFAR 185
FL + K+R I AA L ++ L +++L + + + +
Sbjct: 113 FLYWIVSKKRPTGRNIAAAFLAVIGLALLSLQGDLSINYGDFLTLVCGLMFAVHMVFIDK 172
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
T I++ AI + S + L + +
Sbjct: 173 FTECHDPIALTVIQILAAAIFNWICAPFLDGSFDFTVLMDKSLIGGLLYLAVFSTTVAYL 232
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + G K ST I+ + + SV LK + ++ A+++ LP
Sbjct: 233 LQNSGQKYLSASTSAILLSMESVFGTLFSVIFLKDVLTGKMLAGCALMFAAVLLSELPQK 292
Query: 306 IN 307
Sbjct: 293 KK 294
>gi|227529138|ref|ZP_03959187.1| DMT superfamily drug/metabolite transporter [Lactobacillus
vaginalis ATCC 49540]
gi|227350982|gb|EEJ41273.1| DMT superfamily drug/metabolite transporter [Lactobacillus
vaginalis ATCC 49540]
Length = 310
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 91/295 (30%), Gaps = 11/295 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIV 72
+ + P M G + A ++WGI+ Q + Q + ++S R +S + I
Sbjct: 2 AQKTNNPVMKGIIIAAAASVMWGISGTTLQLISQNLAIPAAWMLSIRT-FSAGIILLVIS 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G + + ++ ++ L + F YA+ + +++P+ V
Sbjct: 61 GIMYGKKTFNVFKRRDTTISVISYAVFGLMANLLTFYYAIQKGNASAATILQYLSPLFIV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFAR 185
G VF ++ ++A L +L + L + +A +
Sbjct: 121 LGGVVFKRQHPFRSDLLAFALALLGVFFALTKGNFTQLDIPLDSLLWGLGSGITAALYVV 180
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
S + + I A + F
Sbjct: 181 LPQKAADSNPPIVVLGWGTIIASILFNIYRPFWVNPPQISGELVAAVATVVLFGTILPFS 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + A V IM+ P+ + SV + + I +V+IA+ +
Sbjct: 241 LLMVATRYAPSDVVSIMDALQPITTSLLSVLFFNLHLTLIEIIGIALVIIAVYIL 295
>gi|167747230|ref|ZP_02419357.1| hypothetical protein ANACAC_01944 [Anaerostipes caccae DSM 14662]
gi|167653208|gb|EDR97337.1| hypothetical protein ANACAC_01944 [Anaerostipes caccae DSM 14662]
Length = 296
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 87/287 (30%), Gaps = 11/287 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G +F I WGI+ + ++L +Q++ + +++ R L S + +
Sbjct: 2 NQNTKGVIFTMLGGIFWGISGIIGKYLFDEKQLTAVWLVTLR-LLSAGLLMLMLAAVQKK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + K AV LVF + + A+ + ++ P + +
Sbjct: 61 GDIFRVWKKKRTAVSQLVFCLFGMTACQMSYFLAIQYSNPGTATVLQYIAPALIMLFCLA 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE--- 194
K + L++I + +I + ++ H L++ + A
Sbjct: 121 VEKRKPKRLEVIVLVCVIAGVFLLATHGDPGSLAVTGRALFWGLAAAVALAVYNIQPEKL 180
Query: 195 ----GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + ++ L L F + G
Sbjct: 181 LNEFGSMETVGWGMFIGGLLMIPVTGFFHVPGIWDMTTVLLALAVIIFGTVIPFGCYLEG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + PL+ V S +L + V + F +++ +
Sbjct: 241 VCLLGPVRASMFACVEPLVAAVMSALLLGEVFVGVDVLGFALIIGGV 287
>gi|156974491|ref|YP_001445398.1| hypothetical protein VIBHAR_02208 [Vibrio harveyi ATCC BAA-1116]
gi|156526085|gb|ABU71171.1| hypothetical protein VIBHAR_02208 [Vibrio harveyi ATCC BAA-1116]
Length = 313
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/310 (11%), Positives = 95/310 (30%), Gaps = 12/310 (3%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISH 58
M + + S+ +K+N +G + +L+ I P++ + Q + +++
Sbjct: 1 MNTASDSNDQSESQTKKNPVSAVTIGVMLALAGTLLFSIKPVFVKLAYQHGGDAVSIMTL 60
Query: 59 RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGF 118
R + SLP + + + + LA + I AL
Sbjct: 61 RAMSSLPVYLGILFWTLRNSEYRGKVRRYGLKAASIGVLGYYLASYL--DITALNYISAQ 118
Query: 119 LTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----- 173
L F+ P V + + + A L+ L + ++ H
Sbjct: 119 LERLLLFLFPTFVVLIMWFKEGQSPKRSVLFAVLVGYLGVGLIVAHDLSHYGEKIWLGGG 178
Query: 174 ---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
+ A + + + ++ FS + + T
Sbjct: 179 LAIASAFVFAVYLVMSKASIVKLGSKLFTSIGMGSAGIAILIHLSFSSLQLNTMSEELIT 238
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ ++ + + + R + + ++ P + + ++FI + +
Sbjct: 239 IGVLLGIFCTVIPSYLIAAAMARLDPAHLSLVSNIGPAMTALCAIFIFNESFTWFHALGM 298
Query: 291 GIVVIAMVVY 300
+ V+++V+
Sbjct: 299 MLTVVSVVMI 308
>gi|83310352|ref|YP_420616.1| permease [Magnetospirillum magneticum AMB-1]
gi|82945193|dbj|BAE50057.1| Predicted permease [Magnetospirillum magneticum AMB-1]
Length = 260
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 50 VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI 109
+ EV+++RV+WSL V + + + L + + + +L S ++V+W FI
Sbjct: 1 MPPTEVLAYRVIWSLLTVMIMLTWTGR-WGEVLVLLASGRRLAVLAASTACISVNWLVFI 59
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-P 168
+ S YF+ P+++V LG V L ERL LQ +A L + ++ + + +G P
Sbjct: 60 RVVGEGNVLEASMGYFLNPLVNVALGVVVLGERLRPLQWVAVGLALAGIVELAIGTGTAP 119
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+L +A T+ Y RK +PV G +E ++ A+ Y+ W + G G+
Sbjct: 120 WAALTLAGTFGVYGLLRKKLPVAPLTGLAVETGLMLPLAVAYLSWR-VAEGAPLLGGSPE 178
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L+ G + + F+ R + +T+G +Y AP + +V + + I
Sbjct: 179 LGAALLASGPVTALPLLWFAAAASRLRYATLGFFQYLAPTGHFLLAVLVYGESPGPAHLI 238
Query: 289 VFGIVVIAMVVYLLPTVINSGK 310
FG + A+ +YL + +S +
Sbjct: 239 TFGCIWAAIGLYLADSWRHSRR 260
>gi|319935302|ref|ZP_08009740.1| hypothetical protein HMPREF9488_00571 [Coprobacillus sp. 29_1]
gi|319809710|gb|EFW06111.1| hypothetical protein HMPREF9488_00571 [Coprobacillus sp. 29_1]
Length = 290
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 103/284 (36%), Gaps = 10/284 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F A +++GITP+ + + +++ R L+ +P F +VY L L
Sbjct: 4 KKKGIIFTVIATLIFGITPVIGKMTYAMGSNGIQLAFLRHLFVVPLFLFIVVYQKLSLRL 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + VG + T++ ++ + + +F+ P+ +F K
Sbjct: 64 TKQQYLDVFKVGFFGNTLTVVMLYMSY-----SYIPVGSATVLHFLYPLFVCLFNFLFYK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV---TWSAYCFARKTIPVGSSEGFF 197
+ LN Q++ L I+ + ++ ++ +AV + AY + +
Sbjct: 119 QTLNQKQMLCLALAIVGVFCFIDNTSSSMIGFVLAVTSGIFFAYYMIGMDHSSIRNISPY 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L I + G + L I + + GI+ S
Sbjct: 179 VFNFYLVIMNTVVIFLLGLLTKSLSIMPIEGYILSAIVAIFASLVGVVLLQLGIRCLGAS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ P+ IV L + + ++ I +V+++ + +
Sbjct: 239 LTAILSTLEPITSIVIGFLFLGETLTVLKIIGCLLVLLSTFILV 282
>gi|166711880|ref|ZP_02243087.1| integral membrane protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 302
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 96/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + L++ + +G+ + + ++ E+ R + L + I
Sbjct: 2 TPAQVSRRAALWMLTSTFAFGLMAITIRLASSTIATTEIAFFRNAFGLLALLPLIARPGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 62 PLPRTRQLP-------HYLARTLIGLASMLCGFWAMRHLPLSQAISLSYATPLFVTVLAV 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E++ + +A + +L++ + +A A I +
Sbjct: 115 IWLHEQVRLRRWLAVAAGFIGVLVILRPGSSTFTPGLLIALLAAVISAVVAIQIKQLSRS 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + D L+L+ G+ + ++ +K ++
Sbjct: 175 DDSDTVVFYTYVFWVPMSLIPALFQWTWPQGIDCLWLVATGIFGTAGQLFWTRALKLGEV 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + + + L+ + + ++ + I+ I I++ A V + + +
Sbjct: 235 SALQPISFMQLPLVALLAWWLFGEAIERHTVIGAAIIIGANVYIAHRETVLARR 288
>gi|262384331|ref|ZP_06077466.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262294034|gb|EEY81967.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 320
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 102/314 (32%), Gaps = 22/314 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G L + A IL+ I +++L E V + S R+ ++ + ++
Sbjct: 1 MNQEKLKGHLLILAANILFAINMPVSKYLLPEHVQPEALTSMRMSFACVMFWITSLFVPY 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LKD + + + + ++ G FI+ L T S P+ + L +
Sbjct: 61 EKVPLKD------LGLLCLCALCGVGLNQGLFIWGLNTTSPVDASIIATAVPIFVMILAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ LKE + ++ LL I + + L S G S +I + S+
Sbjct: 115 LILKEPITRMKTFGVLLGICGAISLILQSTQGSNQASSLGGNLLITVSGFMYSIYLVVSK 174
Query: 195 GFFIEMCVLAIPALFYVV------------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
++ + + ++
Sbjct: 175 PLTLKYSSVTMMKWMFLFSTLITLPFAIESIWNTPAFHKEVFDGQELGAIFFVLFGATFI 234
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + +KR + +TV + Y P++ +VFI + + + +V + +
Sbjct: 235 PYLLIPLALKRIRPTTVSMYNYIQPIVASFIAVFIGQDSFSVTKLVSAALVFSGVYLVTQ 294
Query: 303 PTVINSGKNKTKKS 316
+ + +S
Sbjct: 295 SKSRADLEQQNSQS 308
>gi|241205651|ref|YP_002976747.1| hypothetical protein Rleg_2949 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859541|gb|ACS57208.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 298
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 87/296 (29%), Gaps = 11/296 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +++ A + G T + ++ + + + R + P + + L
Sbjct: 2 SRQVQGYVYLALAMLTVGSTVIASKLIASGLPPFSATALRFAIAFPVLLLLMRATGARLP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +++ + + I L PV+S + + L
Sbjct: 62 RFSRHDR----LILIIQAGAGSVGYTTLLISGLSLTSAADAGVIIGTLPVVSAAISILLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ER ++A L +L + S + AV
Sbjct: 118 RERPQRALLLAVALATSGVLSIAFTPDAAGGSLAGNALIFCAVVCEGLFILLNKKLKTEV 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + I + + F + + + F ++ G +R
Sbjct: 178 APLTLSTLMAGIGFIVAAIPAIFEAPFADGISASAVAAVVYYALVPTVGGFLLWYAGAER 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + AP+ ++ +V IL +P+ + V+ A++ +
Sbjct: 238 VSGTEAALFTALAPVSAVMLAVIILGEPVGLSQIAGIACVLAAVLGLAFAGSRSLK 293
>gi|91216709|ref|ZP_01253674.1| drug/metabolite transporter (DMT) superfamily protein
[Psychroflexus torquis ATCC 700755]
gi|91185178|gb|EAS71556.1| drug/metabolite transporter (DMT) superfamily protein
[Psychroflexus torquis ATCC 700755]
Length = 299
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 98/296 (33%), Gaps = 8/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L V +G+ + + E + EV ++L + ++
Sbjct: 2 NSILKGGLLVALGASCYGLLTTFVKLAYEEHYTPYEVTFAQLLIGFIALVILNLFLKKSE 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+KD+ K + L+ S T L F+ A+ + + I V L +
Sbjct: 62 PPIKDSKLRRKTILYLILSGTSLGFTSIFYYLAIQYITVSVGIVLLMQSVWIGVVLDGII 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + +I + +LI++ ++ + + T+ + +S +
Sbjct: 122 NKIKPTKRKIFSVILILIGTVLAADLLIEKQEIDFAGIGYGILAALSYTVTIMTSNSVGL 181
Query: 199 EMC------VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + L V ++ I I F+ G+
Sbjct: 182 QYHPITRSKWMMLGGLLVVSVITLPELINYMDFGIFIVWGPILALFGTILPPLFFTAGMP 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + I+ + ++ F+L++ + + I +++ ++V+ L V +
Sbjct: 242 KINVGLGAIISSIELPVAVLMGYFVLQEEQNLYKWIGIALILSSIVLMNLRKVKKN 297
>gi|313106014|ref|ZP_07792273.1| hypothetical protein PA39016_000150009 [Pseudomonas aeruginosa
39016]
gi|310878775|gb|EFQ37369.1| hypothetical protein PA39016_000150009 [Pseudomonas aeruginosa
39016]
Length = 306
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/301 (11%), Positives = 94/301 (31%), Gaps = 16/301 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ + + + A LWG + + + ++ L VI R+ A
Sbjct: 1 MVEIPLTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFGRMALGSLVFLVAWR 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ ++ +L + +++ +AL + P++
Sbjct: 61 WRGR------IDYRSGDWKYLLGLAVCEPCLYFLCESFALQYTSAAQAGMITALLPLLVA 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCF 183
+ L ER+ + I L +L + ++L L + +A+ +
Sbjct: 115 VGAWLLLHERIGRMTWIGFGLAVLGSIWLSLAGEPDLHAPQPLLGNFFELLAMLCATGYT 174
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
F + + LF++ S + + ++
Sbjct: 175 LLLKHLSARYSAFALTAMQAFVGTLFFLPLALASADLPSQPSALGIQAVVYLGVVVTVGA 234
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ ++++G+ R S P+ +V + L + ++ + + G+V I + +
Sbjct: 235 YGLYNFGVGRLPASQASGFINLIPVFTLVFASLFLGETLNGPQMLAAGLVFIGVAISQWR 294
Query: 304 T 304
+
Sbjct: 295 S 295
>gi|302379964|ref|ZP_07268443.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3]
gi|302312190|gb|EFK94192.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3]
Length = 302
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 106/300 (35%), Gaps = 4/300 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G +F + +++G TP+ + +V+ R + +P + ++ + L
Sbjct: 1 MRKARGMMFAIISALIFGFTPIMVRETLSNGSNVIMTSFLRGFFVIPFLAISLKSRNISL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K LK + + T+ ++ + ++ F VT +FL
Sbjct: 61 KVTKQELKKLILMCSIGGCITMTMLYASYQYISVGLATSIHFIFPTIVTVYSVMFLNEKM 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP--VGSSEGF 196
K + L +I+L+ + ++ + LA+A + + + + +
Sbjct: 121 TKYKFVSLIASIIGVILLANNVGGSNNFPLGMFLAVASGCTYSFYLIYMDVSGLKNMDSV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ I + ++ +G L + + L++ F I A +
Sbjct: 181 KVTFYNCTINSTMLFIFGLITGDFTLSLSRYAWIIAFVISILVSVFGTLFIQLSIVNAGV 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
ST I P+ ++ + + + D R + ++ +++++ + K + +
Sbjct: 241 STYTIFSTLEPITSVILGIILFNETTDPRRLLGCFMIFLSVMILAVSMRFQERKAREAIN 300
>gi|328542423|ref|YP_004302532.1| integral membrane protein DUF6 [polymorphum gilvum SL003B-26A1]
gi|326412170|gb|ADZ69233.1| Integral membrane protein DUF6 [Polymorphum gilvum SL003B-26A1]
Length = 313
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/309 (14%), Positives = 88/309 (28%), Gaps = 8/309 (2%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVL 61
+ ++ +MG + + A + + ++L + L+V+ R L
Sbjct: 10 PAVDAGDAARAAVPAETPRTPVMGIVLIVLACLCFSCLDATAKYLVVDLPPLQVVWVRFL 69
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
L + + G+ L F A+ Q T
Sbjct: 70 THLVFAVVVFRVWR------APEIFRTDRPGLQFVRGLALLGSTFFNFLAVQYLQLAETM 123
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY 181
F P + L L E + IA ++ + +LI+ + AI +
Sbjct: 124 SIMFAGPFVVTALAGPLLGEWAGLRRWIAIIVGFIGVLIIARPGLGGMHWAAIYSIGAMI 183
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLN 240
C+A + G + +L I A V +G + L+ L
Sbjct: 184 CYAFYALFTRMLAGSNSTIGMLIISAAVPTVAMTPAGLSLWETPASGFHWLLLLSTGLYG 243
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F IF + A + Y + M+ + + +V+ + +
Sbjct: 244 GFGHWIFIIAHRLAPAPLLAPFTYLQIVWMVGLGFLVFGDVPGPWTLVGSAVVIASGLYI 303
Query: 301 LLPTVINSG 309
L I
Sbjct: 304 LYRERIVKR 312
>gi|294633308|ref|ZP_06711867.1| membrane spanning protein DUF6 [Streptomyces sp. e14]
gi|292831089|gb|EFF89439.1| membrane spanning protein DUF6 [Streptomyces sp. e14]
Length = 329
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 78/277 (28%), Gaps = 14/277 (5%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + L + + VL V+ R S + + ++
Sbjct: 12 LLLVALVWGSSYLAAKSATAALPVLAVLFARYAVSALACGALVAARRRKPGWTRAEIRTG 71
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
A Y + +T V++ L + L
Sbjct: 72 TL------LGGTQAAVLVLETYGVAHTSAANAGLIISLTIVLTPLLDRTGGRPGLPPAFF 125
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV-------GSSEGFFIEMC 201
AA L ++++ ++T +G+ L + A + + + +
Sbjct: 126 AAAGLCVVAVGLLTAGTGLHAPRLGDGLVLIAAVVRAGHVALVGRLTAARPVDALHLTTV 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ + + F F ++ ++R S +
Sbjct: 186 QTVVGTALFLPAAVVHASALAHGSAATWGQLIHLALFCSVFAFLAQTWAVQRTSASRASL 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ T P+ + + + + + ++ ++V
Sbjct: 246 LLGTEPVWAVAVGIGLGGERLTLWASLGAALMVAGTY 282
>gi|220927588|ref|YP_002504497.1| hypothetical protein Ccel_0129 [Clostridium cellulolyticum H10]
gi|219997916|gb|ACL74517.1| protein of unknown function DUF6 transmembrane [Clostridium
cellulolyticum H10]
Length = 283
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/288 (9%), Positives = 89/288 (30%), Gaps = 15/288 (5%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ I WG + + T+ L ++ + + R + + + ++ L +
Sbjct: 1 MLITVIFWGYSFVSTKILLNELPPISIAFFRQVIASVVLIGFVIA-----KKLFVKMPLK 55
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + S + +++ F L S P+ ++ S+F K ++ I
Sbjct: 56 DLLLLTASSFFGIVLYFIFENTGLKYTTASNASIIVAAVPIFTLISESLFYKLKITGRLI 115
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVGSSEGFFIE 199
I ++ I + + G + + A+ EG +
Sbjct: 116 ICVIVSISGVFFVIFEQGSLDFTGNLLKGNMLIVGAMVSWVIYTIICKSLTQKYEGIVVT 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ ++ + L ++ + +++ + +
Sbjct: 176 TYQMIAASILFIPLVLNEVDTWHIISGSGIANLLYLALFCSALAYYLYNVAVTNLGATFS 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ P++ I+ V +L + I + ++++++
Sbjct: 236 SMFLNLIPVVSIIGGVLVLHERISAFQIAGMLLIMVSLFFVGRNRDRK 283
>gi|309810824|ref|ZP_07704625.1| putative membrane protein [Dermacoccus sp. Ellin185]
gi|308435130|gb|EFP58961.1| putative membrane protein [Dermacoccus sp. Ellin185]
Length = 361
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/316 (11%), Positives = 91/316 (28%), Gaps = 23/316 (7%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVF 68
+ + A T MG + + +G + + + L + + ++ R+ + +
Sbjct: 18 RRRAGRSGAMSHTSMGLIIAIVSCAAFGTSGSFAKALLGSGWTPVTAVAARISIAALALA 77
Query: 69 F-AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+ SG +L+D +K G+ + L + A+ + ++
Sbjct: 78 IPTAMALSGRWHVLRDNIKPIVLYGIFGVAGCQLF-----YFNAVTHVSVGVALLIEYLA 132
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT-LHSGIPLLSLAIAVTWSAYCFARK 186
P++ V L I I+ LL + + +G + + IA A
Sbjct: 133 PMLLVGWAWARYGRTPRRLTIAGTAAAIVGLLFVLDVFNGFSVDPIGIAWALGAALCLTV 192
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG--------------GEHFFLGNIPDTLF 232
+ E + LA + +
Sbjct: 193 YFVIAGDEESELPPIALAGGGMSVGAVILLAMCALGVQPVSVSTADVTFAGSQMPFWVPV 252
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
L + + + Y + + + L + + + + V+ +
Sbjct: 253 LGLALIAAALAYATGIYAARALGTTVASFISLLEVLFAVAFAWMFVGEAPTLVQVVGGAF 312
Query: 293 VVIAMVVYLLPTVINS 308
+V +V+ L ++
Sbjct: 313 IVGGVVLVRLDESRHA 328
>gi|257466759|ref|ZP_05631070.1| transporter [Fusobacterium gonidiaformans ATCC 25563]
Length = 297
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/298 (10%), Positives = 95/298 (31%), Gaps = 13/298 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ MG L F + WG + + ++L V+ ++ R+L++ + + Y
Sbjct: 1 MNLGMGILVTFIGGVFWGFSGVAGKYLFEYTGVTSDWLVPWRLLFAGCIMLLYLYY---K 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +L+++ + + + + + + P + +
Sbjct: 58 QGKEIFRILKEDYKDLLLYAIFGMMACQYTYFTTVQYSNAAIATVLQYSAPPLIMVYMCY 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPV 190
+++ +++I+ + + + ++ H + + + + +
Sbjct: 118 KERKKPAKIEVISLIFSCIGVFVLCTHFQFETFVISPKALVWGMISALAMVVNTVQPVNL 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G F+ + + + F L F ++ G
Sbjct: 178 LKKYGSFLPLAWSMTIGGSILFFWTRPDKIPVEYTWNLFGGFFAVVFLGTIVAFSLYMQG 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
IK + ++ P+ V S+ +L + + + ++++A+ + PT
Sbjct: 238 IKVIGPTKASLIACVEPISATVLSIILLGTAFEFLDIVGIALILMAVCLLTYPTKNKK 295
>gi|257452876|ref|ZP_05618175.1| transporter [Fusobacterium sp. 3_1_5R]
gi|317059418|ref|ZP_07923903.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313685094|gb|EFS21929.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 297
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/298 (10%), Positives = 94/298 (31%), Gaps = 13/298 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ MG L F + WG + + ++L V+ ++ R+L++ + + Y
Sbjct: 1 MNLGMGILVTFIGGVFWGFSGVAGKYLFEYTGVTSDWLVPWRLLFAGCIMLLYLYY---K 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +L+++ + + + + + + P + +
Sbjct: 58 QGKEIFRILKEDYKDLLLYAIFGMMACQYTYFTTVQYSNAAIATVLQYSAPPLIMVYMCY 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPV 190
+++ +++I+ + + + ++ H + + + + +
Sbjct: 118 KERKKPAKIEVISLIFSCIGVFVLCTHFQFETFVISPKALVWGMISALAMVVNTVQPVNL 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G F+ + + + F L F + G
Sbjct: 178 LKKYGSFLPLAWSMTIGGSILFFWTRPDKIPVEYTWNLFGGFFAVVFLGTIVAFSFYMQG 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
IK + ++ P+ V S+ +L + + + ++++A+ + PT
Sbjct: 238 IKVIGPTKASLIACVEPISATVLSIILLGTAFEFLDIVGIALILMAVCLLTYPTKNKK 295
>gi|229492745|ref|ZP_04386546.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229320404|gb|EEN86224.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 377
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 84/274 (30%), Gaps = 6/274 (2%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A ++WG + L+ + LE +S +V+ R+++ + GL K+
Sbjct: 79 AAAVVWGASFLFMKIGLEGLSFTQVVLWRLVFGALALVLVSAVSRIGLPREFRVWKHLAF 138
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ L W + + + V FL L + ++
Sbjct: 139 LAATQCIVPWLLFSWAEQNMSSGLASIYNATTPLMTMAVSLAFLPGETLTRYKSLGLLLG 198
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-----FIEMCVLAI 205
+++ L L G + S + +A + + ++I
Sbjct: 199 FGGVLIVLAPWNLGVGGSVSSQVACLGATASYGISFVYLRRFVLPLGVDTRTVALLQISI 258
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A V+ + L + L F + ++ + + Y
Sbjct: 259 GAFVMVLASPVIANTPMHLTPAVVLSMIALGALGTGLAFIWNTNVVQGWGPTAASTVTYL 318
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+P++ + +L + + + + V+ ++V
Sbjct: 319 SPVVGVALGAIVLNESVGWNQPVGALAVIAGILV 352
>gi|254501348|ref|ZP_05113499.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222437419|gb|EEE44098.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 297
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 93/291 (31%), Gaps = 7/291 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + + I I+ + L VL+++ R L +LP V I
Sbjct: 8 PRSNARAGIILICAGVICLCISDAIAKALSANYPVLQILFLRNLIALPIVVAMI------ 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + + + F + + F+ P+ + ++
Sbjct: 62 WKLAGPSALKSHKPIAHLVRGGVWVLAAMTFFTSFRYLGLAEATTLVFIAPIFITAISAL 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E++ + A ++ + +L++ + +A+ +A + +
Sbjct: 122 FLNEQVGWRRWSAVMVGFIGVLVVVRPGASAFQPALLLPLATAFLYAVLMLSARLVDERE 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ + + + D L +G + + + + A S
Sbjct: 182 SVWTLMLYLVGSGGLITAITMPFLWVPPQAEDALLFLGIAAFGTAGVTMLTQAFRVAPAS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
T+ EYT+ L + ++ DT + I++ + + +L +
Sbjct: 242 TIAPFEYTSLLWATLLGWIFWREIPDTWTYVGAAIIIASGIFIVLRETKRN 292
>gi|221195677|ref|ZP_03568731.1| putative permease [Atopobium rimae ATCC 49626]
gi|221184443|gb|EEE16836.1| putative permease [Atopobium rimae ATCC 49626]
Length = 330
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 96/301 (31%), Gaps = 11/301 (3%)
Query: 9 EYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLP 65
E S GL + G L V WG ++L V L +I R +S
Sbjct: 29 EASIGLVSDRHKARIHRGMLCVLIGGAAWGAFGTAAKYLLDVYHVEPLWLIDVREFFSAL 88
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+F L + + S T + +IYA+ +
Sbjct: 89 -LFLGAATVVDRKRLTQAIHDRQALGKIFAVSFTAILFSQIAYIYAVDATNSATATIMQA 147
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
+ + +F + +++ + ++ ++ + L L + + A
Sbjct: 148 LGMLGVLFFVCFKARRGPRKREVLGIAMALIGTYLLVTGGDLSSLRLPLRGVFWGALCAC 207
Query: 186 KTIPVGSSE-------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ G F+ + + + + L + L ++G +
Sbjct: 208 AQTSLSILPKKLMEQWGNFVFNGIAFLFSSVCLAVVYQPWNHMPPLDSFGWILVVVGITV 267
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
F + ++ G++ A ++ P++ +++V +L I FG+++ +V
Sbjct: 268 GTFFAYGLYLQGVQDAGSMRAVLLGTIEPVMATITTVIVLGTSFSVTDFIGFGLILGMVV 327
Query: 299 V 299
+
Sbjct: 328 L 328
>gi|217967037|ref|YP_002352543.1| protein of unknown function DUF6 transmembrane [Dictyoglomus
turgidum DSM 6724]
gi|217336136|gb|ACK41929.1| protein of unknown function DUF6 transmembrane [Dictyoglomus
turgidum DSM 6724]
Length = 287
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 95/289 (32%), Gaps = 13/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G V A + W I+ ++ L ++ S E+ R + S
Sbjct: 2 KEKLIGLTLVIIACLFWSISFSVSKLLLKILSPFELAFIRFFLASIFSLIVFFPKIRKAS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + K G+L + + + G + P + + + +F
Sbjct: 62 LSWNYQKPLFIAGLLGVTLYFIFENSGLKF-----TDASEGALIVGSFPALGLLVEYLFH 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA-------VTWSAYCFARKTIPVGS 192
+E+L +I+ LL IL + ++ SG+ L + S + + V
Sbjct: 117 REKLPLNRILGVLLSILGVFLIMSDSGLNLKFNNLFGDFLILLSGISWVIYNWEIKRVNQ 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + I + FS G + + +++G+K
Sbjct: 177 NYPHEVITTFQMIWGSILFIPFLFSTGLKIPKTLDAFIGIFFLAFFCSGLGYLFYNHGLK 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+S V + PL + V L + + ++ I ++++ + +
Sbjct: 237 ILSVSQVVNILNLIPLFGAIWGVIYLNESLTFIKIIGGVLIILGVSISS 285
>gi|315917908|ref|ZP_07914148.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691783|gb|EFS28618.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 303
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/299 (10%), Positives = 96/299 (32%), Gaps = 13/299 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ MG L F + WG + + ++L V+ ++ R+L++ + + Y
Sbjct: 6 NMNLGMGILVTFIGGVFWGFSGVAGKYLFEYTGVTSDWLVPWRLLFAGCIMLLYLYY--- 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +L+++ + + + + + + P + +
Sbjct: 63 KQGKEIFRILKEDYKDLLLYAIFGMMACQYTYFTTVQYSNAAIATVLQYSAPPLIMVYMC 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIP 189
+++ +++I+ + + + ++ H + + + +
Sbjct: 123 YKERKKPAKIEVISLIFSCIGVFVLCTHFQFETFVISPKALVWGMISALAMVVNTVQPVN 182
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ G F+ + + + F L F ++
Sbjct: 183 LLKKYGSFLPLAWSMTIGGSILFFWTRPDKIPVEYTWNLFGGFFAVVFLGTIVAFSLYMQ 242
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
GIK + ++ P+ V S+ +L + + + ++++A+ + PT
Sbjct: 243 GIKVIGPTKASLIACVEPISATVLSIILLGTAFEFLDIVGIALILMAVCLLTYPTKNKK 301
>gi|255264510|ref|ZP_05343852.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255106845|gb|EET49519.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 300
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 101/296 (34%), Gaps = 8/296 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + G +++ +L+ G+T + + + + R + L V I
Sbjct: 2 TQTSPNRPIAGIIWMMLTGLLFVGVTAVVKHLGDDIPAAQSAFLRYVLGLVFVIPMI--- 58
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ D + + + + + + YA+ + +++PV
Sbjct: 59 ----RPMWDAGLSSRQLRLFGIRGVVHTAAVILWFYAMTQIPIAEVTAMNYLSPVYVTLA 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++FL ERL +I+A ++ +L LI+ L S +A+ A FA +
Sbjct: 115 AALFLGERLRPRRIVAIVVALLGALIILRPGLRELNSGHLAMLLVAVMFAAGYLIAKIMS 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ V+ + ++ + + + D +L +L + + + A
Sbjct: 175 SEVSPIVVVGMLSITVTIGLAPFAWAVWVPVSGIDLAWLFLVAVLATTGHYTMTRAFEAA 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ + + + + + +D + +++ A+ + +
Sbjct: 235 PVTVTQPVTFLQLVWATALGALVFGEGVDAYVVLGGALILSAVCFIAWREAVARRQ 290
>gi|226951484|ref|ZP_03821948.1| RarD family protein [Acinetobacter sp. ATCC 27244]
gi|294651007|ref|ZP_06728347.1| DMT superfamily drug/metabolite transporter [Acinetobacter
haemolyticus ATCC 19194]
gi|226837777|gb|EEH70160.1| RarD family protein [Acinetobacter sp. ATCC 27244]
gi|292823108|gb|EFF81971.1| DMT superfamily drug/metabolite transporter [Acinetobacter
haemolyticus ATCC 19194]
Length = 314
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/294 (19%), Positives = 119/294 (40%), Gaps = 5/294 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A + +G+ YTQ L + R++ +LP + + + ++L
Sbjct: 4 KGIAYSVLASVTFGVLYYYTQLLGAFDSEQTFGWRIIATLPFLTLFMWFSGDLFHIKAIL 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV E
Sbjct: 64 KRVIAAPSLLLLLMITSVLTSVQLWIFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYGE 123
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+L+ Q +A L +L + G A+ F + + G F
Sbjct: 124 KLSKFQALAVFLAMLGVGHEIWRLGSIAWETALVAIGYTAYFVIRKQIKTDNLGGF-WWD 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ I + FL L ++G GL ++ + + L G+
Sbjct: 183 MIIILPVAIFFTQTGDTPYFKFLEQPSLALVVMGLGLFSAIGLGCYLLASRYLPLILFGL 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ Y P+L+ + S F L + I + + ++ +A++V ++ + + K +K
Sbjct: 243 LGYLEPVLLALVS-FALGEKIGEEEWLTYILIWLAVLVLVIEGANHLVQQKRRK 295
>gi|148379153|ref|YP_001253694.1| hypothetical protein CBO1167 [Clostridium botulinum A str. ATCC
3502]
gi|153932152|ref|YP_001383528.1| hypothetical protein CLB_1198 [Clostridium botulinum A str. ATCC
19397]
gi|153937700|ref|YP_001387077.1| hypothetical protein CLC_1210 [Clostridium botulinum A str. Hall]
gi|148288637|emb|CAL82718.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
gi|152928196|gb|ABS33696.1| UAA transporter family [Clostridium botulinum A str. ATCC 19397]
gi|152933614|gb|ABS39113.1| UAA transporter family [Clostridium botulinum A str. Hall]
Length = 293
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + +FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKSIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAVLCWASYGVFSKKVMPRYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 MTLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYISILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ IV S IL + I + + +++ + +
Sbjct: 243 IGPSKTSIFVNLVPISSIVLSSMILGEKITIITLLSTALIIAGVYI 288
Score = 39.1 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 39/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + L
Sbjct: 4 SRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKSIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|315499953|ref|YP_004088756.1| hypothetical protein Astex_2968 [Asticcacaulis excentricus CB 48]
gi|315417965|gb|ADU14605.1| protein of unknown function DUF6 transmembrane [Asticcacaulis
excentricus CB 48]
Length = 322
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/309 (11%), Positives = 84/309 (27%), Gaps = 12/309 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++L G L+ ++ + + +V +++ R+L + P +
Sbjct: 9 ASPSALSRWSGYALALAGAFLFATKGIFIKLAYAYEVDASTLLTLRLLIATPFFIVVGLI 68
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + V A L+ F P+ +
Sbjct: 69 TRYRQRKAAPLSGSLYLKALAV-GALGYWFASYTDFEGLVHLSPQFERLILFTYPLFVIL 127
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV--- 190
LG+ ++ L L + A ++ L ++ +
Sbjct: 128 LGAWLFRQPLKVLALPAFVIAYAGLALVFWSEAGSGGPDVAIGAGWVMASSVAFALYLLL 187
Query: 191 ------GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
F + ++ ++ + TL L
Sbjct: 188 AKPLIAQMGAALFTSVGMVGAAIATFIHFGLTHQASAIPADPGLWTLALGLAIGATVLPG 247
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S+ + R ++ + P+ + SV ILK+ + + + +V+ + +Y
Sbjct: 248 YLVSFALARISSQANAVIGFINPIFTMGLSVLILKESLSLIDLLGTVLVLGGVGLYTWLE 307
Query: 305 VINSGKNKT 313
NK
Sbjct: 308 QRPQRLNKA 316
>gi|319782138|ref|YP_004141614.1| hypothetical protein Mesci_2418 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168026|gb|ADV11564.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 316
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 83/296 (28%), Gaps = 3/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +G L VF + ++W +F+ VI R +W+ + +V+ G
Sbjct: 15 SPREERVGMLLVFLSALMWSFGGAIARFITVGDSWTVIFWRSVWAAAFLVCFMVWRDGWR 74
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+LK + A F+ AL P+++
Sbjct: 75 GMLKLF---RDMGLPGLAVGICFATASTAFVVALAYTTVANILLMQAGVPLLAALFAWAL 131
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ER+ +A +I + IM S +S V + +
Sbjct: 132 FRERVGVATWVAIAAVITGVAIMVSESLDGAVSPIGDGLALLIAVMFSVATVITRRFSGV 191
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
M S + + F+ G + +
Sbjct: 192 RMTPATCLGTMLAAGFAVSQASTLAVSVSDMGFLFAFGVVNLGLGLAFFATGARLIPAAI 251
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ P+L + I + I +VV A++V++ + +
Sbjct: 252 AALLGTFEPILGPIWVWLIHSEVPSGRTIIGGAVVVTALLVHIGLEFKRQARPERA 307
>gi|224025917|ref|ZP_03644283.1| hypothetical protein BACCOPRO_02663 [Bacteroides coprophilus DSM
18228]
gi|224019153|gb|EEF77151.1| hypothetical protein BACCOPRO_02663 [Bacteroides coprophilus DSM
18228]
Length = 305
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 96/297 (32%), Gaps = 15/297 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ G + + +G+ PL+T L + + ++ +R L++ + +
Sbjct: 1 MNSLKGIFYGIVTSVTFGLIPLFTLPLMQKGMEFDSILFYRFLFATLALGGMMKLKKESF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + ML+ F + + + +F P+ L +
Sbjct: 61 RIERRDI------PMLILLGFFYTGSAMFLFWGYNFMGAGVATTLHFTYPIFVTLLMFLI 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVG 191
+ER + + +A +L I + ++L L AV +++Y A V
Sbjct: 115 FRERASWVTWLAIILAIFGVSRLSLKGTELSLDPVGVVIVLLSAVAYASYITAVNRSRVR 174
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + V + + + + G + G + + +
Sbjct: 175 DMNGRKLAFYVFIVSTVLFAIKAGTNQGIQALPDAWSIVNLFLLAVVPTVISNITLVLAV 234
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I+ P+ + V + +P I ++ A+ + +L I
Sbjct: 235 HHIGGTLTSILGAMEPVTAVCIGVLVFSEPFTAQEGIGILCIIAAVTLIILTRTIQK 291
>gi|116617664|ref|YP_818035.1| DMT family permease [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|116096511|gb|ABJ61662.1| permease of the drug/metabolite transporter (DMT) superfamily
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 306
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 99/299 (33%), Gaps = 11/299 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G + + L+GI+ + L + ++ ++ R+ S + + FSG
Sbjct: 2 KKQGIICGVLSATLFGISGILASILFRNQNINPEWLVGVRMSLSGIILLIVLFCFSG-RR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V ++++ + + F ++ + + P I V L S+
Sbjct: 61 VFEIWLNKRDVVLIILYGIVGVLLAQSSFFLSVYFGDAATATILQSLGPTIIVILLSLAT 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ + L I + L+ + + ++ + I L I + + P+
Sbjct: 121 RTLPSRLDIWSILIALTGVFLLITNGNINQLVVNSKALFWGILSAFGLAAYTLIPKPLLE 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + + + + + + ++ +
Sbjct: 181 KQSPLVVVAWGLLVGGTAENFFHPIWYIPSQVSTKDWIIMVFIIIAGTLLPYALYVMSLS 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ K +T ++ P++ + SV +L + + + ++ + + LP K
Sbjct: 241 QLKPTTASLLSTIEPMVATLLSVTLLHVHLRMFQVLGILFIISTIFLISLPLERIFKKR 299
>gi|269124723|ref|YP_003298093.1| hypothetical protein Tcur_0457 [Thermomonospora curvata DSM 43183]
gi|268309681|gb|ACY96055.1| protein of unknown function DUF6 transmembrane [Thermomonospora
curvata DSM 43183]
Length = 313
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 91/300 (30%), Gaps = 19/300 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G L A +WG T ++ L ++ V + ++ R L + V
Sbjct: 16 IGALVAITA--IWGSTFPISKDLLTRLPVPDFLALRFLTAALVVGLV--------RPRAL 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +G+ + + L +++F + V + L ++ ++
Sbjct: 66 PRAGWRVIGVGAALGLLYFIGQYLQFVGLQHTAPTVSAFVVSMYVVFTPLLAALLTRKPP 125
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIA-VTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ ++A LL + M+L + S Y + S + V
Sbjct: 126 SRRTVVATLLATTGVAAMSLRGLAFGWGEMLTLFAASLYAAHILALERWSRAQIAYTLTV 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + S +FL L ++ TV I
Sbjct: 186 VQLGTMGLAFLAVASIDGLQLPATRDVPVFLYLALLAGGLALLGQTWAQAHLPAPTVSIT 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL-------PTVINSGKNKTKK 315
P+ + SV K+ +D I +++ A++V + + K +
Sbjct: 246 LVLEPVWAGIISVLFFKERLDARIIIGAALILCALLVITGRARNAPQDGLRRPQRRKVPR 305
>gi|206562740|ref|YP_002233503.1| hypothetical protein BCAM0885 [Burkholderia cenocepacia J2315]
gi|198038780|emb|CAR54742.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 307
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/301 (10%), Positives = 82/301 (27%), Gaps = 6/301 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + L + A +WG + + L+ + R L + +
Sbjct: 1 MKPEARKHLRANLLMLGAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLTVN 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L + P + V +LAV + L + F V+ V L
Sbjct: 61 TASRAQLAAIRREPALLLPGVALGGLLAVSISLQQFGLQYTRIANAGFI-SSLYVVIVPL 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
VF + R+ ALL + L ++ A
Sbjct: 120 MGVFARHRIGAGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHLA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + + L G L + +
Sbjct: 180 KRHDPLVLAFLQFVVCGVACLAVGLAVEPVSVAMLRGALPTLLYGGLLSVGVGYTLQVVA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A + ++ + ++ L + + + +++ ++ L ++ K
Sbjct: 240 QRDAAPAHAAVIFSMEGVFAAIAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARK 299
Query: 311 N 311
Sbjct: 300 K 300
>gi|150006926|ref|YP_001301669.1| hypothetical protein BDI_0262 [Parabacteroides distasonis ATCC
8503]
gi|255016052|ref|ZP_05288178.1| hypothetical protein B2_19270 [Bacteroides sp. 2_1_7]
gi|149935350|gb|ABR42047.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 321
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/314 (14%), Positives = 102/314 (32%), Gaps = 22/314 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G L + A IL+ I +++L E V + S R+ ++ + ++
Sbjct: 2 MNQEKLKGHLLILAANILFAINMPVSKYLLPEHVQPEALTSMRMSFACVMFWITSLFVPY 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LKD + + + + ++ G FI+ L T S P+ + L +
Sbjct: 62 EKVPLKD------LGLLCLCALCGVGLNQGLFIWGLNTTSPVDASIIATAVPIFVMILAA 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ LKE + ++ LL I + + L S G S +I + S+
Sbjct: 116 LILKEPITRMKTFGVLLGICGAISLILQSTQGSNQASSLGGNLLITVSGFMYSIYLVVSK 175
Query: 195 GFFIEMCVLAIPALFYVV------------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
++ + + ++
Sbjct: 176 PLTLKYSSVTMMKWMFLFSTLITLPFAIESIWNTPAFHKEVFDGQELGAIFFVLFGATFV 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + +KR + +TV + Y P++ +VFI + + + +V + +
Sbjct: 236 PYLLIPLALKRIRPTTVSMYNYIQPIVASFIAVFIGQDSFSVTKLVSAALVFSGVYLVTQ 295
Query: 303 PTVINSGKNKTKKS 316
+ + +S
Sbjct: 296 SKSRADLEQQNSQS 309
>gi|145224222|ref|YP_001134900.1| transporter DMT superfamily protein [Mycobacterium gilvum PYR-GCK]
gi|315444556|ref|YP_004077435.1| rarD protein [Mycobacterium sp. Spyr1]
gi|145216708|gb|ABP46112.1| RarD protein, DMT superfamily transporter [Mycobacterium gilvum
PYR-GCK]
gi|315262859|gb|ADT99600.1| rarD protein [Mycobacterium sp. Spyr1]
Length = 296
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/279 (21%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F AY++WG+ P + L+ LE+++HR++WS + + +
Sbjct: 2 RTGLFFGAGAYVMWGLFPAFFPLLKPAGALEILAHRIIWSFVLMVVVVAAVRRMRDIAAI 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +L ++ ++A +W ++YA+ + YF+ P++S+ LG V +E+L
Sbjct: 62 SGRTWL---LLTAASALIAANWLIYVYAVNNGHVVDAALGYFINPLVSIALGLVIFREKL 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
N Q A + +++++++T+ G P + +A+++ Y +K +P IE +
Sbjct: 119 NRWQGSALAIAVVAVVVLTIQLGEPPVVGLGLALSFGLYGLVKKLVPTDPRVSVGIEAAI 178
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A+ Y+V GG LI G+L + +F+ + + T+G++
Sbjct: 179 ATPFAVAYLVALQSGGGGTLTGHGGGHVALLILAGVLTALPLLLFARAAQLLPMVTLGLL 238
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y P + + V + +P+ +R F ++ +A+ V+
Sbjct: 239 FYVTPTMQLTWGVLVGGEPMPPMRWFGFALIWVALAVFT 277
>gi|317470976|ref|ZP_07930354.1| integral membrane protein DUF6 [Anaerostipes sp. 3_2_56FAA]
gi|316901531|gb|EFV23467.1| integral membrane protein DUF6 [Anaerostipes sp. 3_2_56FAA]
Length = 296
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 88/287 (30%), Gaps = 11/287 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G +F I WGI+ + ++L +Q++ + +++ R L S + +
Sbjct: 2 NQNTKGVIFTMLGGIFWGISGIIGKYLFDEKQLTAVWLVTLR-LLSAGLLMLMLAAVQKK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + K AV LVF + + A+ + ++ P + +
Sbjct: 61 GDIFRVWKKKRTAVSQLVFCLFGMTACQMSYFLAIQYSNPGTATVLQYIAPALIMLFCLA 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE--- 194
K + L++I + +I + ++ H L++ + A
Sbjct: 121 VEKRKPKRLEVIVLVCVIAGVFLLATHGDPGSLAVTGRALFWGLAAAVALAVYNIQPEKL 180
Query: 195 ----GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + ++ L L F + G
Sbjct: 181 LNEFGSMETVGWGMFIGGLLMIPVTGFFHVPGIWDMTTVLLALAVIIFGTVIPFGCYLEG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++ + PL+ V S +L + V + F +++ +
Sbjct: 241 VRLLGPVRASMFACVEPLVAAVMSALLLGEVFVGVDVLGFALIIGGV 287
>gi|299066967|emb|CBJ38162.1| conserved membrane protein of unknown functionDUF6, transmembrane
[Ralstonia solanacearum CMR15]
Length = 327
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 10/290 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G L + + +G ++T + V V +SL + +V + L
Sbjct: 32 KLLGVLLIAVSAASFGAMAIFTHYAYASGADTVGLLAVRFSLAALALMVVMRVRRIGLPP 91
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ G+ A F AL L + ++ P+ L +VFL ER
Sbjct: 92 WSR----VAGLAAMGGIGYAGQSFAFFTALHYAPASLVALLLYLYPMCVTVLAAVFLHER 147
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
L ++A +L + + +G+ S A + +
Sbjct: 148 LTPAALLALVLCSVGAGLTVGGAGLSGGSAPGVVLGVAAAVIYSVYITVGARVTRGVDPI 207
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ A+ Y F L GL F G++R
Sbjct: 208 ACTTLICTAAAVVYAGAAVAGVPARFPGSVAGWAAALAIAGLSTVIAILAFFAGLQRLGA 267
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ P++ + + +L + I + +++ ++
Sbjct: 268 AQASMLSTLEPVVTVALAALLLGESIGAAQMAGGALILAGVLWLTRADAR 317
>gi|255281887|ref|ZP_05346442.1| integral membrane protein domain protein [Bryantella formatexigens
DSM 14469]
gi|255267560|gb|EET60765.1| integral membrane protein domain protein [Bryantella formatexigens
DSM 14469]
Length = 291
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 83/293 (28%), Gaps = 19/293 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L I+WG T + T+ L +E++ +R + L +
Sbjct: 1 MKNKNTAGHLAALLTIIIWGTTFISTKILLADFQPVEILFYRFIIGLLALLVVY------ 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + +++ AL V P + L +
Sbjct: 55 -PHRLRGTTRGQELTFAAAGLCGICLYYLLENIALTYTLASNVGVIISVAPFFTALLSHI 113
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP-------- 189
+KE A + ++ + + +G L +
Sbjct: 114 VMKEEKLRANFFAGFAVAMAGIFLIGFNGSRLELNPAGDLLALLAAFVWACYSVLTKKIS 173
Query: 190 ---VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ C + L ++ + F + L ++ F
Sbjct: 174 GYGYHTILTTRRVFCYGILFMLPALLLSDFKLEPGRLAQPVYLFNMLYLGLGASALCFVT 233
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+++ +K + Y P++ +V+S F+L + I + + + + +
Sbjct: 234 WNFAVKVLGAVKTSVYIYMVPVITVVTSAFVLHEQITVLAGAGTVLTLAGLFL 286
Score = 36.4 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 11/136 (8%), Positives = 31/136 (22%), Gaps = 1/136 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
A+ F + + + +
Sbjct: 9 HLAALLTIIIWGTTFISTKILLADFQPVEILFYRFIIGLLALLVVYPHRLRGTTRGQELT 68
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ-PIDTVRTIVF 290
F + + + + S VG++ AP + S ++K+ + F
Sbjct: 69 FAAAGLCGICLYYLLENIALTYTLASNVGVIISVAPFFTALLSHIVMKEEKLRANFFAGF 128
Query: 291 GIVVIAMVVYLLPTVI 306
+ + + +
Sbjct: 129 AVAMAGIFLIGFNGSR 144
>gi|153854210|ref|ZP_01995518.1| hypothetical protein DORLON_01509 [Dorea longicatena DSM 13814]
gi|149753259|gb|EDM63190.1| hypothetical protein DORLON_01509 [Dorea longicatena DSM 13814]
Length = 297
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/286 (10%), Positives = 73/286 (25%), Gaps = 6/286 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG + ++ + R L + I KDT
Sbjct: 13 LMLLLTAFIWGTAFVAQSVGMDYLEPFTFNGVRSLIGGAALLPCIWILQKLNGRSKDTGT 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +L + F VI +G K+ +
Sbjct: 73 KKDLLTGGLACGVLLFAASSLQQIGIKYTTAGKAGFITAFYIVIVPVMGVFLHKK-IGWK 131
Query: 147 QIIAALLIILSLLIM----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+A +L + L + + G + + + A +G +
Sbjct: 132 IWLAVVLAVAGLYFLCITESFSVGKGDILVFLCALVFAVHILVIDHFAPKVDGVKMSCIQ 191
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + V + L L + + G K + ++
Sbjct: 192 FFVCGILSVPFMFALETPKITAVMTAWMPILYAGVLSCGVAYTLQILGQKNVNPAVASLL 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+++ +L + + ++ A+++ +P
Sbjct: 252 LSLESCFSVLAGWIVLGERLSIREMSGCILMFAAIILAQVPEKKKR 297
>gi|218886898|ref|YP_002436219.1| hypothetical protein DvMF_1807 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757852|gb|ACL08751.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 320
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/275 (11%), Positives = 81/275 (29%), Gaps = 17/275 (6%)
Query: 41 PLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
+ + LE + V+ R+ S + + + +
Sbjct: 27 FIAMKVALEGFDPMVVVFGRMGISSAVFLAL------WRNFRHVRYRKGDWKRLGAMALC 80
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
+++ F YAL V P+ + L ERL +L I+ ++
Sbjct: 81 EPCLYFVFEAYALRYTSASQAGMIVSVMPLCVAVAAWIVLGERLARRVWSGFVLAIIGVI 140
Query: 160 IMTLHSGIPLLSL----------AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
++L + V+ + Y K + F + LA F
Sbjct: 141 WLSLGGTSSDNAPNPLLGNLLELCAMVSATGYVINAKKLSATYPPLFITAVQSLAGSVFF 200
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + +P + ++ + ++++G+ R P++
Sbjct: 201 LPLLFLPTTQLPDAFPLLPTLSVVYLGTCISLGAYGLYNFGVSRLPAGQASAFINLIPVI 260
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ +L + + +V++ +++
Sbjct: 261 TLLMGRVLLGDQLTPQQYAASALVLVGVLLSQGRG 295
>gi|237746006|ref|ZP_04576486.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377357|gb|EEO27448.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 304
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/308 (14%), Positives = 100/308 (32%), Gaps = 19/308 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFA-IVYFS 75
N S + G L A +LW + L +S +E+ R L++ + +
Sbjct: 2 NPSASVLRGYLLALSATVLWSTVFPLVRVLPVALSPVELAFWRWLFTFSCMLPFGMAAVR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+K K M+ +++ A T S PV
Sbjct: 62 KHWPLVKKNAK-----WMVPAGVLGFSLYSILMFEAGHTTDATNMSLIAATAPVFMALFA 116
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCF 183
FL ERL+ Q + ++ +L++ L G + LA +
Sbjct: 117 GFFLGERLSPAQWGGLGVAVVGVLVLVLQGDFRRIAGLSLTVGDFWMLLAASFFAIYSIL 176
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
R+ F M ++ AL + + + L +
Sbjct: 177 VRRRPSAMPQNVFMTAMLAYSLLALSPFMMAEAVKPGYRLPDMTTLLIMLYIALVPTLIG 236
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +++ ++ + GI+ Y+ PL + +V L + + + +++ +++ L
Sbjct: 237 YLLWNRSVECIGAARAGIVYYSIPLFSSLEAVVFLHETVSFSQLAGGALIIGGILLSSLN 296
Query: 304 TVINSGKN 311
+ ++
Sbjct: 297 VLKTLWRS 304
>gi|197103564|ref|YP_002128941.1| rarD protein [Phenylobacterium zucineum HLK1]
gi|196476984|gb|ACG76512.1| rarD protein [Phenylobacterium zucineum HLK1]
Length = 310
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/305 (19%), Positives = 129/305 (42%), Gaps = 4/305 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAI 71
++ + + Y++WG PL Q + V E++SHR+LWS P +
Sbjct: 1 MAPSASDGEGRLALTAGIVCYLIWGFVPLAFQAIGALGVGSWEMLSHRILWSAPAAALFV 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + + L+ P+ +G L S+ ++A +W FI+A+ + + TS Y++ P+++
Sbjct: 61 LLARQA-AEARAVLRQPRVLGWLAVSSVLIATNWVVFIWAVNSGRLLETSLGYYINPLVN 119
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ G++ +ER++ + A L ++ +L+ T G + +
Sbjct: 120 MAAGALIFRERIDRIGQAAIALALVGVLVQTAALGHLPWVSLVLAFSFGGYGIVRKRVSA 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S++ + C++ ++ + GE F + +LI G + + +F++
Sbjct: 180 SAQTGLLWECLILGLPSLALILWLQARGEGHFTAGPVEAAWLIASGPITAAPLALFAWAA 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+R LS +G +++ AP + + + +R I F + V+L S
Sbjct: 240 RRLPLSAMGFLQFLAPTISFCIG-LLQGEAFTPLRAISFAFIWAGAAVFLYGAWRRSRAV 298
Query: 312 KTKKS 316
+ +
Sbjct: 299 RVAIA 303
>gi|113474164|ref|YP_720225.1| hypothetical protein Tery_0269 [Trichodesmium erythraeum IMS101]
gi|110165212|gb|ABG49752.1| protein of unknown function DUF6, transmembrane [Trichodesmium
erythraeum IMS101]
Length = 583
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/332 (10%), Positives = 98/332 (29%), Gaps = 35/332 (10%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSV---------------------- 52
+ + +G + + + + + + +
Sbjct: 250 KSQKSPSQVQIGLILALLSAAVLSLFNVCVKIVFNTPPQPYQVFGGLFSVSGLINPDVWN 309
Query: 53 -LEVISHRVLWSLPGV-FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIY 110
L ++ R + + A + S ++ +K+ + + +
Sbjct: 310 SLLILLLRQGVVMLLMPLVATFLYPAVWSDIEHLIKSKNFSLWWKVIGSAFFLFLSQVLI 369
Query: 111 ALL--TRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP 168
+ + +F+ P+I+V L + + L+I A ++I L +++
Sbjct: 370 YISIGNIPTGIAMTIFFIYPIITVLLSWGLFGDSPSVLRICAMVIIGLGGILVIPGGVGN 429
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL---- 224
+A ++ F+ + S G + I V++ +
Sbjct: 430 YQPGVMAGVAASITFSGYILLTQMSAGKLHPIPFSLINFAGIFVFSALGMMMPKPVEWSA 489
Query: 225 -----GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
+ I G+L + + S+ IK A + IM P L + ++F +
Sbjct: 490 NFDPSLWSNLIVISIILGVLTISSYVLNSFAIKFAGAARASIMGTLGPPLTALIALFTIG 549
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + +V+I + + +
Sbjct: 550 EALGVKEIFGIILVIIGVAAMSFERMFGVKRK 581
>gi|294677830|ref|YP_003578445.1| RarD protein [Rhodobacter capsulatus SB 1003]
gi|294476650|gb|ADE86038.1| RarD protein [Rhodobacter capsulatus SB 1003]
Length = 294
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 62/279 (22%), Positives = 127/279 (45%), Gaps = 8/279 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
T G + A +WG++ +Y + L +V LEV++HR LWS+ + + +
Sbjct: 4 TTKGFFAMVAACCVWGLSGIYYKALSEVPPLEVLAHRTLWSVLFLGAVVAVQGQ--RAVL 61
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+++ +L +A +++++W FI+++ + S Y++ P+++V LG VF ER
Sbjct: 62 AQALRGRSLRVLAAAAVVISLNWFGFIWSVQNGRAVEASLGYYIFPLVAVALGMVFYGER 121
Query: 143 LNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ Q +A ++ ++ +T G P ++L +A T+ Y +K + V E+
Sbjct: 122 MGRAQAVAVMIAAAAVGWLTWALGAAPWIALMLATTFGLYGLLKKGLSVPPVVSVLAEVV 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL-----LNSFVFCIFSYGIKRAKL 256
+LA A+ + F + F L + +FSY +R ++
Sbjct: 182 LLAPLAVLLLAAAHFGWFGLAPGSGRFGSDFGSSLMLAFSGLMTGGPLMLFSYAAQRVRM 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+T+G+++Y P L +V + +P I F ++
Sbjct: 242 ATIGLVQYLNPTLQFGVAVAVFAEPFTRAHAIAFALIWG 280
>gi|147918843|ref|YP_687431.1| DMT family permease [uncultured methanogenic archaeon RC-I]
gi|110622827|emb|CAJ38105.1| predicted transporter (DMT superfamily) [uncultured methanogenic
archaeon RC-I]
Length = 298
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 102/297 (34%), Gaps = 14/297 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
++ EN + + +F + WG + + L+ + +E+ + R + P + +
Sbjct: 1 MAGENPQQNHALILIGLFIINVFWGGSFIANAIALKSMGPIEIAALRFFIAAPLLVIVTL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G D +++ + T + + + + A S + +
Sbjct: 61 AWKGWSIFRIDL---KDLGVLIIMALTGVTLQYVIQVTAQNYTTAINASLLINTSVFFIM 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL----------LSLAIAVTWSAYC 182
FL ++FL E+L+ +++ A++ + ++ + L + L A+ WS Y
Sbjct: 118 FLSAMFLAEKLSVHKVLGAVIGFGGVALLVSGGNLSLDVGLHVIGDAMILFCALLWSVYS 177
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
K I + + + L + +
Sbjct: 178 IYGKKIAAKYDPLTVLNYLFILGTIGIIPFYLLTPHQNPASLPLDALGAIVFLSIFCSII 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I++ +++ S V + Y PL I+ + IL + + + I V M +
Sbjct: 238 AYLIYNVALEKMDASRVALFIYVVPLSTIILAWLILGESMTLLSIIGGIAVCAGMYI 294
>gi|322420233|ref|YP_004199456.1| hypothetical protein GM18_2730 [Geobacter sp. M18]
gi|320126620|gb|ADW14180.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M18]
Length = 313
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 93/302 (30%), Gaps = 17/302 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV---SVLEVISHRVLWSLPGVFFAI 71
S A + G L + A +LWG + T+ + + + L V R+ SLP +
Sbjct: 3 STHTARAESRRGLLLIMLAAVLWGTVGISTKTIYGLATTTPLTVGFLRLALSLPVLLILC 62
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY-FVTPVI 130
+ +++ + A++ + A+ + + PV+
Sbjct: 63 WARVK----RRMFRIGAADFALMLLVGLMTALYQVCYFSAIELTGVAVATLVTLCTAPVM 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYC 182
+ + + R +IA L + ++ L +S + +
Sbjct: 119 VAVISTAVTRRRPAGYVLIALLGALTGTALLVLFQHQGGISGTNTGGVLLALGSAFGYAL 178
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
A + + S F + V + S G L + + +
Sbjct: 179 VAVVSQRLSSRYDPFQSIAVSFSLGAVILFCCTQSRGLELNFTPACWLLLVYLGTVPTAL 238
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ +F G++ + + P++ + + I + + + I++ + L
Sbjct: 239 AYALFFSGMRSTPATVASVSTLLEPMVATLLAWLIFGESFAPMALLG-VIILSGSLFILY 297
Query: 303 PT 304
Sbjct: 298 RG 299
>gi|119383195|ref|YP_914251.1| hypothetical protein Pden_0441 [Paracoccus denitrificans PD1222]
gi|119372962|gb|ABL68555.1| protein of unknown function DUF6, transmembrane [Paracoccus
denitrificans PD1222]
Length = 317
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 91/296 (30%), Gaps = 8/296 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L + L+ + + L L+++ L S P + ++
Sbjct: 5 NVKGALLALLSMGLYSTHDVIIKLLGATYPALQILFFSALLSFPPLAVLLL------RDP 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P+ + + + YA F P+I L L E
Sbjct: 59 THGTLLPRNPFWVGLRSLCIVASGVGGFYAFSVLPLAQVYSILFAAPLIVTVLSVPLLGE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + +A + +LI+ PL +A A A I V +
Sbjct: 119 KVGLHRWLAVCAGLGGVLIVLRPGVTPLGLGHLAALMGATATALSAIAVRRLGRSERTVI 178
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L P + + G S G + + D L + + + + V
Sbjct: 179 LLLWPMIGNFLLTGASLGFAYRPMELGDLALTGVIAALGLAAGFLLILAYQAGEAANVAP 238
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKTKKS 316
M+Y+ L + F+ + D + G+++ + + + + S ++
Sbjct: 239 MQYSQMLWAVGYGWFLFGERPDGPTVLGAGLIMASGLYILMRERLGASRLRPATRA 294
>gi|187932385|ref|YP_001886153.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
gi|187720538|gb|ACD21759.1| integral membrane protein [Clostridium botulinum B str. Eklund 17B]
Length = 290
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 102/292 (34%), Gaps = 13/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T G + + + +G+ P++ + VI R L S +F ++Y +
Sbjct: 1 MNTYKGISYAILSSVAFGLMPIFASIAYENGSNPTTVIIFRFLLSSISLFIYLLYKKVKI 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +L + + L + +F+ P I +G VF
Sbjct: 61 KIERKPML-----ILLGIGIIAYTITTQTLFMSYNYLGAGLATTLHFIYPAIVCIIGFVF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
LKE+++ ++I+ LL + + + L ++ I V ++ + S
Sbjct: 116 LKEKISQRKLISLLLSGIGVYSLVAFESKSLSTIGIFLALFSGVAYAINLIILGLDCIKS 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + L + + F+ ++ + + I+
Sbjct: 176 VDNKISTLYMCVGATLGMITYGLFTNSIVLTFNIKMVGSYIGISLISTIVSIILLLKAIE 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S+ I+ P++ I+ V IL + + I +++ A +V T
Sbjct: 236 LIGPSSTSILGTFEPIVSIIFGVLILGEKLSFELVIGAALILTATIVLAKDT 287
>gi|239907091|ref|YP_002953832.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
gi|239796957|dbj|BAH75946.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
Length = 305
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 93/301 (30%), Gaps = 17/301 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L A +LW + + + ++ +++ R L +L +
Sbjct: 4 RFLGYLAALSATVLWAGNFVVARGIAQEIPPVQLNFWRWLLALACILPFAW----PKLRA 59
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +++ F A T + + PV+ + L + E
Sbjct: 60 DWPAMKRHWRYLAAMGLVGVSLLNAFVYKAGQTTESLNMALLVPTAPVMIIILSRIVYGE 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIP 189
L ++ ++++ +L + G A F RK
Sbjct: 120 PLTPRRLGGVAIVLVGVLELVSRGDWSHIASLRFLPGDLWALAGAACFALYSLFVRKRPA 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S EGF + + + + G + + + +++
Sbjct: 180 GISVEGFNAATFAWGLVLMLPALAVEAAAGPTTSWNLRVLSGVAYAGIGCSFAAYTLWTK 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I GI+ Y P++ V SV++L + + + ++V +++ L + S
Sbjct: 240 AIGSIGPVLAGIVYYFLPVVTAVESVWLLGEAVTAAHVLGGALIVSGILLATLDVRLLSV 299
Query: 310 K 310
+
Sbjct: 300 R 300
>gi|219854031|ref|YP_002471153.1| hypothetical protein CKR_0688 [Clostridium kluyveri NBRC 12016]
gi|219567755|dbj|BAH05739.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 306
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 81/280 (28%), Gaps = 14/280 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
A +LWG + + L + ++S R S + +
Sbjct: 21 IALGLIA-LLWGTSYAIIKDILSDIRPFTLMSLRFGISTIFLCVIFPKKLRNIRKKDILH 79
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + + + + SF +I FLG + K+ N
Sbjct: 80 GSII--------GIFLFLAFLNLVTGIFYTTASKQSFLVGSYVLIVPFLGWIIYKKPPNI 131
Query: 146 LQIIAALLIILSLLIMTLHSGIPLL----SLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ A+L + + ++TL+ + + A S+ +
Sbjct: 132 YSVFGAVLAVFGIGLLTLNGSFYINKGDSISILCSLSFACHMIAIEYFNKDSDPIVSTII 191
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ +++ G +L + F + + K ++ +
Sbjct: 192 QFLVTSILFIILTGIFESFTIYLSSKVLKSIAYLTIFTTVIPFVVQNIAQKYISSTSTAL 251
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + +V +L + + I ++ +++
Sbjct: 252 ILTLESAFGGIFAVILLNEILSFQMLIGCVLIFTGIIIQT 291
>gi|295687667|ref|YP_003591360.1| RarD protein, DMT superfamily transporter [Caulobacter segnis ATCC
21756]
gi|295429570|gb|ADG08742.1| RarD protein, DMT superfamily transporter [Caulobacter segnis ATCC
21756]
Length = 303
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/288 (19%), Positives = 109/288 (37%), Gaps = 4/288 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
Y LWG PLY L V E+I+HR LW+ P ++ +
Sbjct: 13 RAALAAGIGCYTLWGFLPLYFHLLSTLGVGSWEMIAHRTLWAAPWALLIVLLARQA-GQV 71
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L+ PK + +L S + V+W +++A+ TS Y++ P++++ G++ +E
Sbjct: 72 AAVLRQPKTLFVLALSTLAIFVNWSIYVFAVNAGHVIETSLGYYINPLMNMAAGALLFRE 131
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R++ IA L + + I T G + + ++ C
Sbjct: 132 RISREGAIAIGLAAVGVAIQTAALGHLPIISLGVALSFCCYAILRKQVKADAQTGLFIEC 191
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V + + G + T L+ G +F++ +R LS +G
Sbjct: 192 AYLAIPGLLYVMHLQTTGAGHLGAGMGVTTLLLLAGPATVVPLALFAWSARRMPLSAMGF 251
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+++ AP L V L +P +R + F + + + V+ +
Sbjct: 252 LQFIAPSLQFAVGVS-LGEPFTPLRALSFAFIWLGVAVFAYGAWKKTR 298
>gi|163846359|ref|YP_001634403.1| hypothetical protein Caur_0776 [Chloroflexus aurantiacus J-10-fl]
gi|222524124|ref|YP_002568595.1| hypothetical protein Chy400_0840 [Chloroflexus sp. Y-400-fl]
gi|163667648|gb|ABY34014.1| protein of unknown function DUF6 transmembrane [Chloroflexus
aurantiacus J-10-fl]
gi|222448003|gb|ACM52269.1| protein of unknown function DUF6 transmembrane [Chloroflexus sp.
Y-400-fl]
Length = 293
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 95/295 (32%), Gaps = 7/295 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ P L++ A + + + + ++S +++ R L LP V ++
Sbjct: 4 TSIQHVHPAWRAALWMAGALLSFSAMAVGGRELAAELSTFQILFFRSLIGLPLVGLVVMR 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ G L L + F + Y L F P+ +
Sbjct: 64 YGGPQQLRTRRLPLHLLRNLAHFGGQYG------WFYGLAFISLAEVFAIEFTVPLWTAL 117
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L V L ERL ++++A +L I I+ + A+AV +A+ +A
Sbjct: 118 LAVVVLGERLTPIRLLAVILGIAGTFIILRPGSGMIHPAALAVLLAAFGYATAHTLTRKL 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ +L L + + L + ++I G+ + ++
Sbjct: 178 VSTETPLAILFYMTLIQLPLGLIPALTDWTLPSPARWPWVIVVGVSALTAHYCMARALRL 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
A + V +++ L+ + + + + +++ + L
Sbjct: 238 ADATVVVPLDFLRLPLIALIGALFYGETVTWSLALGSILILSGIATNLWGEQRRQ 292
>gi|262363565|gb|ACY60286.1| membrane protein [Yersinia pestis D106004]
Length = 262
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 6/264 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G F AY +WG+ P Y + ++QV E+++HRV+WS + ++ S
Sbjct: 3 KQQTRQGIFFALAAYFIWGLAPAYFKLIQQVPADEILTHRVIWSFFFM-LILLTVSRHWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++D KN K + +L +A ++A +W FI+A+ S YF+ P+++V G +FL
Sbjct: 62 QVRDACKNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A L +LI G P++ L +A+T++ Y RK + V + G I
Sbjct: 122 GERFRRMQWVAVALAFAGVLIQLWQFGSLPVIGLGLAITFALYGLLRKKLGVDAQTGMLI 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ + S H + + + R
Sbjct: 182 ETMWLLPVAAVYLFFIADSPTSHLSANAWSL----NLAASRCGRHYHNPTAVLHRGGHPF 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPI 282
P+ V+ +
Sbjct: 238 ASFDTGFLPVSWANIDVYFGGDVL 261
Score = 40.7 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 44/137 (32%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
GI A + A + + V + E + L + +
Sbjct: 9 GIFFALAAYFIWGLAPAYFKLIQQVPADEILTHRVIWSFFFMLILLTVSRHWPQVRDACK 68
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
N L L +L + + +F + + + + + PL+ ++ + L + +
Sbjct: 69 NRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGYFINPLVNVLFGMLFLGERFRRM 128
Query: 286 RTIVFGIVVIAMVVYLL 302
+ + + +++ L
Sbjct: 129 QWVAVALAFAGVLIQLW 145
>gi|167550140|ref|ZP_02343897.1| RarD protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|168463857|ref|ZP_02697774.1| RarD protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197262298|ref|ZP_03162372.1| RarD protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|195633255|gb|EDX51669.1| RarD protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197240553|gb|EDY23173.1| RarD protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205324761|gb|EDZ12600.1| RarD protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 304
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + + F + D
Sbjct: 6 RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQ-RTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 AWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDTGPLISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|312897595|ref|ZP_07757012.1| integral membrane protein DUF6 [Megasphaera micronuciformis F0359]
gi|310621228|gb|EFQ04771.1| integral membrane protein DUF6 [Megasphaera micronuciformis F0359]
Length = 328
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/291 (9%), Positives = 86/291 (29%), Gaps = 12/291 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T G ++WG++ + QFL S + R+ + + +
Sbjct: 33 TNTTRGYWCAALGGVIWGLSGVAGQFLLSVYDASPFWLTGVRMTCAGIVFLILSLRQTRS 92
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++ K + + L ++ + +++ + + V+ L +
Sbjct: 93 LGIVVRHPKELITIFVYGIFG--LMLNQLSYFFSISYSNAGTATVLQTLCVVMMAVLVCL 150
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
+ ++++ +L + ++++ H L + S + +I
Sbjct: 151 QRRRLPYSREVLSVILAFIGVVLIATHGRITELVLSPRALIWGLLDAVSCVVYTLLSIKP 210
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + + + ++ L F + +F G
Sbjct: 211 VRKWGSVVVNAIGMLTGGIFLSLLYRPWEAMPHLDLAGWLAFFGIVLFGTVLTYVLFLQG 270
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ ++ P+ + S +L + +++ + + +
Sbjct: 271 VRDIGPLNTTLIATVEPVSSALCSALLLGTVFTFAEIVGLVLIIATVFLIV 321
>gi|188576586|ref|YP_001913515.1| integral membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521038|gb|ACD58983.1| integral membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 303
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 97/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + L++ + +G+ + + ++ E+ R + L + IV
Sbjct: 3 TPAQVSRRAALWMLTSTFAFGLMAITIRLASSTIATTEIAFFRNAFGLLALLPLIVRPGK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 63 LLPRTRQLP-------HYLARTLIGLASMLCGFWAMRHLPLSQAISLSYATPLFVTVLAV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E++ + +A + +L++ + +A A I +
Sbjct: 116 IWLHEQVRLRRWLAVAAGFIGVLVILRPGSSTFTPGLLIALLAAVISAVVAIQIKQLSRS 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + D L+L+ G+ + ++ +K ++
Sbjct: 176 DDSDTVVFYTYVFWVPMSLIPALFQWTWPQGIDWLWLVATGIFGTAGQLFWTRALKLGEV 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S++ + + L+ + + ++ + I I I++ A V + + +
Sbjct: 236 SSLQPISFMQLPLVALLAWWLFGEAIKRHTVIGAAIIIGANVYIAHRETVLARR 289
>gi|84623757|ref|YP_451129.1| integral membrane protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84367697|dbj|BAE68855.1| integral membrane protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 302
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 97/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + L++ + +G+ + + ++ E+ R + L + IV
Sbjct: 2 TPAQVSRRAALWMLTSTFAFGLMAITIRLASSTIATTEIAFFRNAFGLLALLPLIVRPGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 62 LLPRTRQLP-------HYLARTLIGLASMLCGFWAMRHLPLSQAISLSYATPLFVTVLAV 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E++ + +A + +L++ + +A A I +
Sbjct: 115 IWLHEQVRLRRWLAVAAGFIGVLVILRPGSSTFTPGLLIALLAAVISAVVAIQIKQLSRS 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + D L+L+ G+ + ++ +K ++
Sbjct: 175 DDSDTVVFYTYVFWVPMSLIPALFQWTWPQGIDWLWLVATGIFGTAGQLFWTRALKLGEV 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S++ + + L+ + + ++ + I I I++ A V + + +
Sbjct: 235 SSLQPISFMQLPLVALLAWWLFGEAIKRHTVIGAAIIIGANVYIAHRETVLARR 288
>gi|237794453|ref|YP_002862005.1| UAA transporter family [Clostridium botulinum Ba4 str. 657]
gi|229260805|gb|ACQ51838.1| UAA transporter family [Clostridium botulinum Ba4 str. 657]
Length = 293
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 91/286 (31%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVFFFIIMIKEKNIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAVLCWASYGVFSKKVMPRYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 MTLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYISILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ IV S IL + I + + +++ + +
Sbjct: 243 IGPSKTSIFVNLVPISSIVLSSMILGEKITIITLLSTALIIAGVYI 288
Score = 39.9 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 40/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + + L
Sbjct: 4 SRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVFFFIIMIKEKNIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|296157386|ref|ZP_06840221.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
Ch1-1]
gi|295892158|gb|EFG71941.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
Ch1-1]
Length = 340
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/308 (11%), Positives = 83/308 (26%), Gaps = 9/308 (2%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + + + + A ++WG + + L+ + R L V IV
Sbjct: 32 KAETRQHLRANVLMLIAAMIWGSAFVAQRLSLDAIGPFLFTGLRFLLGALVVLTLIVCVR 91
Query: 76 GGLSL---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
++ + +G V +LA L + F + VI
Sbjct: 92 RSALAELSKREPGGARELLGAGVLLGMVLAASISLQQIGLQYTKVANAGFISSLYVVIVP 151
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTI 188
LG +F + A L + + ++ +
Sbjct: 152 LLGVLFKHRT-GIGTWLGAALAAVGMYFLSVNEQFSILYGDWYQLAGALVISIQMMLVGR 210
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L +V + + G L + I
Sbjct: 211 FALRHDALMLALVQFVTCGLACLVVGLAIEPFSLAVIARAAPTIVYGGALSVGVAYTIQV 270
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K A S ++ + +++ +L + + +V+ ++V +
Sbjct: 271 VAQKHAAPSHAAVIFSMEGVFAALAAWLVLDETMSARALAGCALVLAGLIVCQVMPAWQR 330
Query: 309 GKNKTKKS 316
G + ++
Sbjct: 331 GHERLPRA 338
>gi|257056512|ref|YP_003134344.1| putative permease, DMT superfamily [Saccharomonospora viridis DSM
43017]
gi|256586384|gb|ACU97517.1| predicted permease, DMT superfamily [Saccharomonospora viridis DSM
43017]
Length = 351
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/314 (12%), Positives = 95/314 (30%), Gaps = 21/314 (6%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWS 63
T + + + G + + A + +G + + + L ++ +V + R+ +
Sbjct: 4 TSSDTTADATTVARPRSRSRGIVLLVLASLCFGSSGVLGKPAMLSGLTPEQVATARISIA 63
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ + L + + + +L + +A F+ A +
Sbjct: 64 AVVLLLGVGLTRPALLRV----RRGQWRLLLGYGLLGVAGVQLFYFLAAARVPVGIAILL 119
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILS------LLIMTLHSGIPLLSLAIAVT 177
F +PV+ + RL L +L + + + LL+ A
Sbjct: 120 EFTSPVLVALWVRFVRRVRLPWPMWTGIGLALLGLALVARVHEGLVLDVLGLLAGIAAAL 179
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE---------HFFLGNIP 228
SA F V S + + I A+ +
Sbjct: 180 CSAAYFLIGEQGVASHHPLSMVTWGMVIAAVAVCLIAPPWTMPSSTLLSSAEFGPWRPPV 239
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L + L F + ++ ST ++ PL+ + +L + + V+ +
Sbjct: 240 WLLLVTVAVLSTVFAYLAGITALRHLPASTASVLALLEPLVATSMAWALLGEALVWVQIL 299
Query: 289 VFGIVVIAMVVYLL 302
+++ ++ L
Sbjct: 300 GAFVLLGGALLVQL 313
>gi|319649279|ref|ZP_08003437.1| hypothetical protein HMPREF1013_00041 [Bacillus sp. 2_A_57_CT2]
gi|317398913|gb|EFV79593.1| hypothetical protein HMPREF1013_00041 [Bacillus sp. 2_A_57_CT2]
Length = 301
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 85/299 (28%), Gaps = 17/299 (5%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A WG + +F ++ V R L + +F +
Sbjct: 1 MLTLATATWGSAFIAGKFAVQSFEPATVAFLRFLGAAILLFPLMWIMEKDRKR----PNL 56
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ T +A++ F A +S PV+ V L +FLKE++
Sbjct: 57 KDHGLFALLGLTGIALYNICFFLATKHAPVIKSSLFIASNPVLIVLLSGLFLKEKITKNH 116
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIPVGSSEGFF 197
II + + ++ + + L AV A + +
Sbjct: 117 IIGMAVALTGVVFIITDGHLLKLFQYGFEPIDFVLLGAVVSWAIYSVVGKVVLKKFSSVE 176
Query: 198 IEMCVLAIPALFYVVWNGF--SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+A LF + + S + T + F ++ GIK
Sbjct: 177 STTYAVAYGTLFLLPFASAETSWMDIQQASMTTWTAIAHMSIFVTVVSFVMYYNGIKEVG 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ I P+ ++ + L + I V+ + + + +K
Sbjct: 237 AAKASIFINVMPVSAVIMATVFLGETFTMAHGIGAAFVLTGVYIGTNAKMFKRRMHKQS 295
>gi|269216563|ref|ZP_06160417.1| transporter [Slackia exigua ATCC 700122]
gi|269130092|gb|EEZ61174.1| transporter [Slackia exigua ATCC 700122]
Length = 314
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 17/281 (6%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A + WG + + + L+ ++ + S R L + V F N
Sbjct: 15 LLVLATLFWGFSFVVVKGALDDMTPGWLTSIRFLLTAMIVGFVC-------RKTIRRHFN 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + + + L +F VI FL ++R
Sbjct: 68 REHILYGCVLGIVAFFAFWVQNVGLTDTTPGRNAFLTGTYCVIVPFLYWAIDRKRPTIFN 127
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGFFI 198
I+AALL I + ++L + + A+ F
Sbjct: 128 IVAALLCIGGVGFISLGHDLSFALRWGDGLTLFSACFIALHMVFVAKFAKGHDMLTLTFF 187
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ ++ + + G F ++ + G R +
Sbjct: 188 QLLSSSVFGMLISTFAEPLPGMAAFASTSFLVQMGYLVIFASALAMVFQNLGQTRVPPTQ 247
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + ++ SV + + + + F ++ +V+
Sbjct: 248 ASLILSLESVFGVIFSVLLYGEDMTLQLFVGFALIFTGLVI 288
>gi|222148032|ref|YP_002548989.1| permease [Agrobacterium vitis S4]
gi|221735020|gb|ACM35983.1| permease [Agrobacterium vitis S4]
Length = 317
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 103/315 (32%), Gaps = 18/315 (5%)
Query: 14 LSKENASLPTM---MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFF 69
++ E ++ P G +F + ++ + + V ++ +R ++L +
Sbjct: 1 MNSEVSAGPIRGPIRGIVFKVASVTVFVAMQTAIKLAGDDVPAGQITFYRSAFALIPILA 60
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ Y + L+ V V I Y L+ + P+
Sbjct: 61 YLAYLGQIRTGLRTA-----NVFGHVKRGLIGIAAMACGFYGLVHLPMPDAIAIGYAMPL 115
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSA 180
I+V +VFL E + + A + ++ ++I++ G + +AV SA
Sbjct: 116 IAVVFAAVFLGETVRLYRWSAVAIGLVGVVIISWPKLTLLQDGFYGSEVGMGTLAVLASA 175
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
A + V ++ ++ + + S + + L G+
Sbjct: 176 TLGAAAMLQVRQLVREEKTATIVLYFSIIAALISLVSLPFGWNDLSARQLGLLAFAGICG 235
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + A +ST+ EY++ L + + + IV A +
Sbjct: 236 GLAQILLTESYRHADISTIAPFEYSSILFGSLIGYLLFDDLPSIHTLVGTLIVAGAGIFI 295
Query: 301 LLPTVINSGKNKTKK 315
+L + + +
Sbjct: 296 ILREHQLGLERRAAR 310
>gi|226194497|ref|ZP_03790095.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9]
gi|225933582|gb|EEH29571.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9]
Length = 317
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 90/296 (30%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G L+V + + +G ++ ++ VL ++ R + +
Sbjct: 7 SSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 RWP------RGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 121 WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFS 248
V I + + P + + F
Sbjct: 181 DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAG 296
Score = 41.8 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 128 TRAKAVALALCVAGSALMVGGGR 150
>gi|304438996|ref|ZP_07398917.1| DMT superfamily drug/metabolite transporter [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304372522|gb|EFM26107.1| DMT superfamily drug/metabolite transporter [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 288
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 96/283 (33%), Gaps = 5/283 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G +++ + + + ++ ++ + + E + R +F IV
Sbjct: 1 MNSLKKAKNLGPIYMIASSFFFALMAVFIRYTKDLPTFEQVVFRNFVISILMFLLIV--- 57
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+K + + + + YA+ +S ++P +
Sbjct: 58 --KEKRTHEMKVKDGKKEIFYRSLFGFIGMVCNFYAVKYLNIADSSAIGKLSPFFVMIFA 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ L E+L I+A +L IL +L++ + ++ A + +
Sbjct: 116 ALLLGEKLEKHSIVAIILSILGMLLVVKPKFDGSMVPSLVAVAGAVSAGLAMAMLSAVGK 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ +F + +F + N + L L+ G+ F + K K
Sbjct: 176 KVRGEVIILYFGIFSTLACFPFLVGNFVIPNGTEILNLLMIGVSAGFGQFFLTLAYKSGK 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S + I ++ + I F+ + D + I++++
Sbjct: 236 ASEIAIYNFSQIIFSIFIGYFLFSEKTDLISLTGMAIIILSAY 278
>gi|226310519|ref|YP_002770413.1| hypothetical protein BBR47_09320 [Brevibacillus brevis NBRC 100599]
gi|226093467|dbj|BAH41909.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 315
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 19/305 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
++ +G + + A +WG + ++ LE + ++ R +L + IV
Sbjct: 2 SQSQWKQMFLGAVCLTLAAAIWGGVYVVSKVVLEVIPPFTLLILRFCIALVVLAAFIVAR 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + ++ S + + + + +P
Sbjct: 62 K-------ERVAKKDYPLLMAISFVGVTISIAAQFLGTKLSTAHMGALITSASPAFIAIF 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMT-----------LHSGIPLLSLAIAVTWSAYCF 183
LKER++ Q LL + ++I+ L + L AI+
Sbjct: 115 AVWLLKERIHLKQAAGILLATIGVIIVIGVPDQADAQSSLAGNLILFLAAISWGLYTVLS 174
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ T S I + W + G L + +
Sbjct: 175 KKATQRYSSLLVTTYVALFGIIFTSPLMFWELSVTPVSWQFGWDIWAGVLYIGMISTAGA 234
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F +++ G + + + P++ +L + + + I + + L
Sbjct: 235 FYLWNKGFELMPAGSGAGFFFVQPIVGAFLGWLLLHEHLGIGFFAGGSFIFIGVALSTLR 294
Query: 304 TVINS 308
T
Sbjct: 295 TKNKR 299
>gi|56414935|ref|YP_152010.1| hypothetical protein SPA2851 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615922|ref|YP_001589887.1| hypothetical protein SPAB_03717 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168242755|ref|ZP_02667687.1| RarD protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168820287|ref|ZP_02832287.1| RarD protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194451736|ref|YP_002046959.1| hypothetical protein SeHA_C3198 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197248670|ref|YP_002147898.1| RarD protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197363863|ref|YP_002143500.1| hypothetical protein SSPA2656 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|238909765|ref|ZP_04653602.1| hypothetical protein SentesTe_01345 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|56129192|gb|AAV78698.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161365286|gb|ABX69054.1| hypothetical protein SPAB_03717 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194410040|gb|ACF70259.1| RarD protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197095340|emb|CAR60898.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212373|gb|ACH49770.1| RarD protein [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|205338033|gb|EDZ24797.1| RarD protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205342876|gb|EDZ29640.1| RarD protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
Length = 304
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + + F + D
Sbjct: 6 RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQ-RTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 AWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDSGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|296132808|ref|YP_003640055.1| protein of unknown function DUF6 transmembrane [Thermincola sp. JR]
gi|296031386|gb|ADG82154.1| protein of unknown function DUF6 transmembrane [Thermincola potens
JR]
Length = 320
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 12/305 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + P + L V + + L+ + L + + ++R+L+S + V
Sbjct: 10 MPESTTDKPLINPYLAVLVGVLAVSFSSLFVK-LSSAPSIVIATYRLLFSFLILAPFTVT 68
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ K + M S LA+H+ + +L ++ P+ V
Sbjct: 69 VKRS----DLKSMSQKEILMAAASGIFLAMHFFTWFTSLKYTSVASSTVLVTTQPIFVVL 124
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP---- 189
+F KE++ ++ L + +I+ + +
Sbjct: 125 GSYLFFKEKITVKAMLGGALALTGSVIVGASDFRVGADALFGDVLALAAAVLVSGYLIIG 184
Query: 190 ---VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+L V+ + S F LFL +
Sbjct: 185 RRLRSMVSLSAYTFVTYGSASLTLVLISFVSRTPFFPYSLKDWLLFLALAVVCTILGHTS 244
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F++ ++ S + + P+ I+ ++ L + + +++I + ++ +
Sbjct: 245 FNWALRYLPASVIAVSVLGEPIGAIIWALVFLAEIPTPRQIFGGAVILIGIYIFTRSSRK 304
Query: 307 NSGKN 311
+
Sbjct: 305 PPARE 309
>gi|205353928|ref|YP_002227729.1| hypothetical protein SG2896 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205273709|emb|CAR38702.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629042|gb|EGE35385.1| Putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 304
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 62/292 (21%), Positives = 117/292 (40%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + A+ + + D
Sbjct: 6 RNGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIP-LLLAVRFLFRQRTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 VWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ Q IA + +T + A+A+T + +
Sbjct: 125 SLFQAIAVF---SGVCGLTFQIIMLRHFPALALTMRLSFALYGLARKFIHYDVMTSITIE 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ AL + + + + +F+ + L G+ +
Sbjct: 182 TLWALPVSLLIFLFSDTGPIISANTPFFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLAQ 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 242 YIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|281355075|ref|ZP_06241569.1| protein of unknown function DUF6 transmembrane [Victivallis
vadensis ATCC BAA-548]
gi|281317955|gb|EFB01975.1| protein of unknown function DUF6 transmembrane [Victivallis
vadensis ATCC BAA-548]
Length = 319
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 97/302 (32%), Gaps = 15/302 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G L A +G+ PL+ L E + V+ +R ++ + + +
Sbjct: 2 NDKFKGFLLGAVAAATYGMNPLFALPLYQEGLEADSVLFYRYSMAVAMLGMLMKFQRQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K+ + + A A + S FV PV+ + ++F
Sbjct: 62 RLKKNEVLPLII------GGLLFAGSSLTLFLAYRYMDAGIASTILFVYPVMVAVIMAMF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVG 191
+E+L + + + +L + + ++ LS+ A++++ Y K +
Sbjct: 116 FREKLTPVTVGSIVLALTGIGLLYKGGDGGPLSMTGIILVMLSALSYAIYMVGVKQSALK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + +L YV+ F + L + I
Sbjct: 176 NLPGMRLTFYILLFGLAVYVIRLKFGLELQVIPSWKGWGNVVALAFLPTVVSLLCTTLAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + I+ P+ + V + + + I +++I++ + + N
Sbjct: 236 RYIGATPAAILGALEPVTAVFFGVMVFGEQLTFRLAIGIVMIIISVSLIIAGKAAAGRLN 295
Query: 312 KT 313
Sbjct: 296 AA 297
>gi|168236038|ref|ZP_02661096.1| RarD protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194736270|ref|YP_002115939.1| RarD protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194711772|gb|ACF90993.1| RarD protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290786|gb|EDY30140.1| RarD protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 304
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + + F + D
Sbjct: 6 RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQ-RTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 AWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFIFSDSGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|170733687|ref|YP_001765634.1| hypothetical protein Bcenmc03_2351 [Burkholderia cenocepacia MC0-3]
gi|169816929|gb|ACA91512.1| protein of unknown function DUF6 transmembrane [Burkholderia
cenocepacia MC0-3]
Length = 309
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 90/290 (31%), Gaps = 16/290 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G +V + +G ++ ++ V VL ++ R + +
Sbjct: 7 SSSDALQGAFYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAIARHRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 AWP------RGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A +L + +M L +A+A+ + ++ G
Sbjct: 121 WWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALAAAVIYSLYIVGGTKATRGV 180
Query: 197 FIEMCVLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I A+ V F + L + F
Sbjct: 181 DPLATTAIICLSATATLAAIAVVRTAAFGAPPRWPATAGGWASMLAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G++R + ++ P++ + + + + + ++ ++ A++
Sbjct: 241 AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVL 290
Score = 39.5 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%)
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + L + ++ A+ S V ++ Y P + + + +
Sbjct: 63 HRRVAWPRGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWW 122
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPT 304
L + + + + + V + +
Sbjct: 123 LGERLTRAKAVALVLCVAGSALMVGGG 149
>gi|283853444|ref|ZP_06370688.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
gi|283571164|gb|EFC19180.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
Length = 317
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 81/297 (27%), Gaps = 17/297 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L A ILW + + + Q + ++ R L +L V +
Sbjct: 4 SSRTAGILAALAATILWSGNFVAARGIAQAIPPFQLNFWRWLLALACVLPLAL----PRL 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + A T + P++ + L +F
Sbjct: 60 RADWPGMRRHWRYLAAIGLVGVTGLNTLVYKAAQTTTSLNMALLVPTAPIMILILSRLFH 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKT 187
+E L + ++ +++L +L + G + +A + F+R
Sbjct: 120 EEPLTYRRVAGVGVVLLGVLTLFSRGDWQTLVGVRFAEGDWIALAGVACFAAYSFFSRYR 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S +GF + V L + + ++
Sbjct: 180 PKDVSLQGFNAAAFAWGLLFCLPGVLWEAVCLPLPEGSPAVFGSILYVGIGCSFAAYLLW 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I G++ Y+ PL + +L +PI + + +
Sbjct: 240 TKAITAIGPVQAGMVYYSLPLFTAAEATLLLGEPIALFHLAGGAFIACGIAIATGRG 296
>gi|16761764|ref|NP_457381.1| hypothetical protein STY3126 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143248|ref|NP_806590.1| hypothetical protein t2894 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|39546353|ref|NP_461905.2| integral membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167993485|ref|ZP_02574579.1| RarD protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168231082|ref|ZP_02656140.1| RarD protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194470137|ref|ZP_03076121.1| RarD protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|200387142|ref|ZP_03213754.1| RarD protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204928221|ref|ZP_03219421.1| RarD protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|213424884|ref|ZP_03357634.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213649830|ref|ZP_03379883.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213859779|ref|ZP_03385483.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25303481|pir||AD0864 probable membrane protein STY3126 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504066|emb|CAD02812.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138881|gb|AAO70450.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194456501|gb|EDX45340.1| RarD protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|199604240|gb|EDZ02785.1| RarD protein [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322543|gb|EDZ07740.1| RarD protein [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205328486|gb|EDZ15250.1| RarD protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205334625|gb|EDZ21389.1| RarD protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|267995127|gb|ACY90012.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159546|emb|CBW19065.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914007|dbj|BAJ37981.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225669|gb|EFX50723.1| Putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322613388|gb|EFY10329.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620980|gb|EFY17838.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624043|gb|EFY20877.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628217|gb|EFY25006.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633336|gb|EFY30078.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636086|gb|EFY32794.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639423|gb|EFY36111.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322643714|gb|EFY40266.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648827|gb|EFY45274.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655180|gb|EFY51490.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657989|gb|EFY54257.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664091|gb|EFY60290.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667059|gb|EFY63231.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322673108|gb|EFY69215.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677901|gb|EFY73964.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681076|gb|EFY77109.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685672|gb|EFY81666.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323131344|gb|ADX18774.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323194811|gb|EFZ79998.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196562|gb|EFZ81710.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323205024|gb|EFZ90007.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207774|gb|EFZ92720.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212673|gb|EFZ97490.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214843|gb|EFZ99591.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222573|gb|EGA06938.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226452|gb|EGA10660.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230668|gb|EGA14786.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234981|gb|EGA19067.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239019|gb|EGA23069.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244623|gb|EGA28629.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247238|gb|EGA31204.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251771|gb|EGA35636.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256414|gb|EGA40150.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262410|gb|EGA45966.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267494|gb|EGA50978.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269102|gb|EGA52557.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 304
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + + F + D
Sbjct: 6 RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQ-RTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 AWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDTGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|220905153|ref|YP_002480465.1| hypothetical protein Ddes_1891 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869452|gb|ACL49787.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 301
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 93/303 (30%), Gaps = 17/303 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G A I+W + + + + + R L +L + F+G
Sbjct: 2 QKNVTGYASALLAVIIWSGNFVVARAVAGLIPPWQCNFWRWLIALIILLP----FAGKHW 57
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
G+ + + + F A T + + PV+ + L V
Sbjct: 58 RTDWPAIKKNWRGLSLLGILGVTLLNTFLYKAGQTTESINMALLVPTAPVVILILSRVLY 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKT 187
E ++ ++ L+++ + I+ G + F R+
Sbjct: 118 NEPISPRRMAGVLVVLAGVAILVSRGQWDRLAHLRFNEGDLWALGGVLCFGLYSLFIRQR 177
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
P S GF I L + + L ++ F ++
Sbjct: 178 SPDISPMGFSIATFALGLLYSLPFTAIEAFMLPLPQMSATLVISVLYAGIGCSALSFWLW 237
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + R G++ Y+ P+ +++ +L + + + +V+ +++ L +
Sbjct: 238 TVAVDRIGPVRAGMVYYSLPVFAGIAASIVLHERVAPAQLAGGALVISGIIIATLVLPQH 297
Query: 308 SGK 310
K
Sbjct: 298 RAK 300
>gi|296390576|ref|ZP_06880051.1| hypothetical protein PaerPAb_20581 [Pseudomonas aeruginosa PAb1]
Length = 301
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 90/295 (30%), Gaps = 16/295 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + A LWG + + + ++ L VI R+ A +
Sbjct: 1 MTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFGRMALGSLVFLVAWRWRGR- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +L + +++ +AL + P++ +
Sbjct: 60 -----IDYRPGDWKYLLGLAVCEPCLYFLCESFALQYTSAAQAGMITALLPLLVAVGAWL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTI 188
L ER+ + I L +L + ++L L + +A+ +
Sbjct: 115 LLHERIGRMTWIGFGLAVLGSIWLSLAGEPDLHAPQPLLGNFFELLAMLCATGYTLLLKH 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F + + LF++ S + + ++ + +++
Sbjct: 175 LSARYSAFALTAMQAFVGTLFFLPLALASADLPSQPSALGIQAVVYLGVVVTVGAYGLYN 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+G+ R S P+ +V + L + ++ + + G+V I + +
Sbjct: 235 FGVGRLPASQASGFINLIPVFTLVFASLFLGETLNGPQMLAAGLVFIGVAISQWR 289
Score = 44.9 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 2/144 (1%)
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
MT L L +A+ + + ++ +A+ +L ++V + G
Sbjct: 1 MTRTRWFALACLILAMALWGSSYVVLKVAFRELPPLWVIFGRMALGSLVFLVAWRWRGRI 60
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ G+ L F S+ ++ + G++ PLL+ V + +L +
Sbjct: 61 DYRPGD--WKYLLGLAVCEPCLYFLCESFALQYTSAAQAGMITALLPLLVAVGAWLLLHE 118
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPT 304
I + I FG+ V+ + L
Sbjct: 119 RIGRMTWIGFGLAVLGSIWLSLAG 142
>gi|184158728|ref|YP_001847067.1| DMT family permease [Acinetobacter baumannii ACICU]
gi|332873722|ref|ZP_08441665.1| putative membrane protein [Acinetobacter baumannii 6014059]
gi|183210322|gb|ACC57720.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Acinetobacter baumannii ACICU]
gi|322507460|gb|ADX02914.1| Membrane protein putative [Acinetobacter baumannii 1656-2]
gi|323518646|gb|ADX93027.1| DMT family permease [Acinetobacter baumannii TCDC-AB0715]
gi|332738110|gb|EGJ68994.1| putative membrane protein [Acinetobacter baumannii 6014059]
Length = 300
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 101/287 (35%), Gaps = 9/287 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ L +GTL + A +L G L+ S + ++ R L S + ++
Sbjct: 1 MDDHHLKRKVGTLEMVVAMLLSGSIGLFV-IKSGQSPVNIVFFRCLISALCLIPICYFYG 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
K K + ++V S ++ +W A L + Y V P + +FLG
Sbjct: 60 H----FKKVYFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLG 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ E+LN ++ ++ + L+++ + S +
Sbjct: 116 ALAFHEKLNKNDVLWTIVAFVGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITK 175
Query: 196 FFIEMCVLAIPALF----YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
L I + + F + L +F++ + I
Sbjct: 176 KLSNTPPLLIVFIQTLSGAIAMTPFMSVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
K+ L+ + I+ + P+ IV F + + + + G++++ ++
Sbjct: 236 KKIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVL 282
Score = 36.0 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 7/146 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
GL + + ++G V A L+ I+ L T+ L L ++ + L + +
Sbjct: 143 GLGSASVNSNELVGLGLVLIATTLYSISVLITKKLSNTPPLLIVFIQTLSGAIAMTPFM- 201
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S+ ++ + + ++ A + A+ + F+ P+ ++
Sbjct: 202 ------SVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIKKIPLNNIAILSFIYPISTI 255
Query: 133 FLGSVFLKERLNHLQIIAALLIILSL 158
+ F L Q++ A LI+L +
Sbjct: 256 VIDYFFFDHVLTSTQVLGAGLILLGV 281
>gi|328880994|emb|CCA54233.1| Permease of the drug or metabolite transporter (DMT) superfamily
[Streptomyces venezuelae ATCC 10712]
Length = 368
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 79/272 (29%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L+ + E + +V R+L+ + A+V L +
Sbjct: 29 ALIWGFSFLFIKVGTEGFAPFQVTFGRLLFGTAVLAVALVVKRDRLPRGARVWGHLTVAA 88
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ + + + + + V L I +
Sbjct: 89 FLLNALPFSLFAYAELTIPSTLAGICNATTPLWGMLLSLVALSEDRPTRVRAAGLGIGFV 148
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L SG+ + A+A+ S + G + L +
Sbjct: 149 GVLTVLGAWQGFSGLDMTGTALALLASLSYAVGWIYVRRTLSGTGASNLALAGSQLGVAT 208
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L V + +P + L + + + +T ++ Y P
Sbjct: 209 LQLAVVTPLFTTLPDSVEVVPLLAVIALGALGTGYAMLLQYGVVAEVGPTTAAMVTYFIP 268
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + V +L + + + IV+ +
Sbjct: 269 VIATAAGVALLNEQLTWNTPVGAAIVLAGAAL 300
>gi|325919299|ref|ZP_08181339.1| putative permease [Xanthomonas gardneri ATCC 19865]
gi|325550231|gb|EGD21045.1| putative permease [Xanthomonas gardneri ATCC 19865]
Length = 291
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 53/292 (18%), Positives = 97/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L F Y + I+ + + LE + + VL+ + V F
Sbjct: 2 LKGVLLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLVAVPFLKKPDDRLR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L VFLKE +
Sbjct: 58 ELVMAKQPSLWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVVFLKEEV 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 118 HWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVITLRMAGHSEKRLTLY 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V G F + L GYGLL Y + A +S V +
Sbjct: 178 GAGVIGPLVMGGIMMSPTFVWPTLYQWYLLAGYGLLAGLAAICLMYATRMAPVSVVAPTQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 289
>gi|320333472|ref|YP_004170183.1| hypothetical protein Deima_0863 [Deinococcus maricopensis DSM
21211]
gi|319754761|gb|ADV66518.1| protein of unknown function DUF6 transmembrane [Deinococcus
maricopensis DSM 21211]
Length = 304
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 87/289 (30%), Gaps = 5/289 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P G L + +WG T + ++ +I+ R + ++
Sbjct: 2 SPHARGLLLLILVTAIWGSTFPVIKGATDTLAPPILIAWRFTVGAVTLLPLLLIRRQPRP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ A ++A + I L T +F ++ V+ +V
Sbjct: 62 AGTALPPRSLPRDALMLGAWLIAGYGTQTIA-LQTTTANRAAFFTALSVVLVPLWVTVAG 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL---SLAIAVTWSAYCFARKTIPVGSSEGF 196
++RL +A L + L +++ G + A
Sbjct: 121 RQRLGWTLGLALPLAVGGLALLSWEGGALVTGDLWALACAFTYAGFILALERTAAHHAPL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + A F +W + + P + + + + G +
Sbjct: 181 PFTLAQVLAVAGFAWLWALIAAPTQLLPAHAPWGALVYLGVAATAVTTLLQTIGQRTVTA 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ I+ P+ ++ S +L + I I +VV A ++ P +
Sbjct: 241 TEASIIYALEPVAAVLFSFLLLGEGIGVRGLIGGALVVGATILSQWPAL 289
>gi|257065005|ref|YP_003144677.1| predicted permease [Slackia heliotrinireducens DSM 20476]
gi|256792658|gb|ACV23328.1| predicted permease [Slackia heliotrinireducens DSM 20476]
Length = 287
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 106/287 (36%), Gaps = 18/287 (6%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A ++WG ++ +++ + + R + + + + +S +
Sbjct: 3 VIAVVIWGSIGIFVRYI-PMPSSFIAFARGVIGVAFLLAFMAVRGKRMS----YAEMKPE 57
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +++ + + ++W A + + Y+ P+I + LKERL +++
Sbjct: 58 LPIMIATGIAIGINWALLFEAYRHTTVAVATLCYYFAPIIVILASPFVLKERLTPRKVVC 117
Query: 151 ALLIILSLLIMTL------------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L+ +L + +++ +G ++ + C +++
Sbjct: 118 VLVALLGVTLVSGVVGGAPTTGPAGGNGPLGVAFGLGAALFYGCNMILNKLSPNTDALSK 177
Query: 199 EMCVLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L+ AL V + F+GG LI + + ++ I+
Sbjct: 178 TIVQLSTAALVMVPYLLFTGGFGDVSFTLRSTVFLLIVGIVHTGVAYLLYFAAIRVLPAQ 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
T+ ++ Y P IV S +L +P+ + I +++ A +V LP
Sbjct: 238 TIAVLSYLDPATAIVLSALLLAEPLTALGLIGAVLILGAALVSELPG 284
>gi|209965556|ref|YP_002298471.1| integral membrane protein, putative [Rhodospirillum centenum SW]
gi|209959022|gb|ACI99658.1| integral membrane protein, putative [Rhodospirillum centenum SW]
Length = 297
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 93/296 (31%), Gaps = 8/296 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A T+ G L + + + L +++ R L+SL + + G
Sbjct: 8 ARTSTLAGILLFIATVFCFSVMDAMVKDLSARYGTWQIMFFRGLFSLLPIAVLVAQSGGI 67
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L + + + F Y+ F TP++ L
Sbjct: 68 AALRTERPVSHLLR------GLVGIATAFCFFYSYGHMPLADVYAIAFATPLMITALSVP 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E + + A L+ + +LIM +A+ A+ +A I V
Sbjct: 122 LLGEHVGWRRWTAVLVGFVGVLIMLRPGEGLGTPVALVALAGAFFYALLMIYVRRLARTE 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD-TLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L V + + + L+ G+L F + + +RA
Sbjct: 182 TTAAIVFYFVLLLCVLSAVMMLPDWRTPDTALDWTLLVATGILGGFGQILMTLAFRRAPP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S V EYT + + + D I IV+ + + L + + + +
Sbjct: 242 SAVAPFEYTGMIWAVFFGFTFFGEVPDPAIWIGGAIVIGSGLYILHREALLARRGR 297
>gi|198246061|ref|YP_002216962.1| RarD protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|207858251|ref|YP_002244902.1| hypothetical protein SEN2830 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|197940577|gb|ACH77910.1| RarD protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|206710054|emb|CAR34409.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326624727|gb|EGE31072.1| RarD protein [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 304
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + A+ + + D
Sbjct: 6 RNGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIP-LLLAVRFLFRQRTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 VWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDTGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|310780204|ref|YP_003968536.1| protein of unknown function DUF6 transmembrane [Ilyobacter
polytropus DSM 2926]
gi|309749527|gb|ADO84188.1| protein of unknown function DUF6 transmembrane [Ilyobacter
polytropus DSM 2926]
Length = 291
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 98/287 (34%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
LF+ + +G + + V E + R L SL F+ I
Sbjct: 2 KDKTKAILFMIFSGFAFGFMGATVKLSGNIPVFEKVFFRNLVSLLVAFYMI------KKS 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ + + + YA+ ++ ++P +FLK
Sbjct: 56 KVSIFGKMENQKFLMLRSIMGLLGVFANFYAINHLVLADSTMLNKLSPFFVTIFAFIFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+L+ +QI A +L L++ + A++ +S C + +G
Sbjct: 116 EKLSKIQIPALILAFSGALLIIKPQFSLEVLPALSGAFSGMCAGAAYTVIRYLKGKEEPA 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +L V+ +F + + L+L+G G+ + + + K A S V
Sbjct: 176 TIIFYFSLVSVLGTIPFLLLNFQVPSNYQLLYLLGTGVFAALGQFMITLAYKYAPASEVS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + + + + + D I+ + + V+ +
Sbjct: 236 IYNYFSVISSGIIGFILWGEIPDLKSISGAVIITL-VAVFSFFYIKK 281
>gi|294676449|ref|YP_003577064.1| hypothetical protein RCAP_rcc00892 [Rhodobacter capsulatus SB 1003]
gi|294475269|gb|ADE84657.1| protein of unknown function DUF6, transmembrane [Rhodobacter
capsulatus SB 1003]
Length = 295
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 8/294 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
++ + + G L++ I + ++L + E R W L + +++
Sbjct: 1 MTSISEKNQPVEGVLWMLATGIAFVFVNGIVRYLGTALPAAESAFIRFAWGLLFLAPSLL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+P + + + + YA+ + ++ P+I
Sbjct: 61 PLLRS-------GISPGLFKLFALRGALHTIAVMLWFYAMARITISEVTAIGYLNPIIVT 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+F E ++ A L +L L++ L +A +A+ F + +
Sbjct: 114 LGAGLFFGEGFRPARMAAIGLAMLGALVVLRPGLRELSPGHLAQLGAAFGFGLSYLVMKR 173
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
V+A+ AL + + ++ L+L + + +
Sbjct: 174 LTQLAPASTVVAVMALSVTIGLAPFALAVWQPVSLSQLLWLGAVAVFATAGHYCMTRAFA 233
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
A ++ + + + + + +D + I++ A+V
Sbjct: 234 CAPMTVTQPVTFLQLVWATALGWSVFGEAVDPWVILGGAIILAAVVFLTWRESR 287
>gi|258404415|ref|YP_003197157.1| hypothetical protein Dret_0277 [Desulfohalobium retbaense DSM 5692]
gi|257796642|gb|ACV67579.1| protein of unknown function DUF6 transmembrane [Desulfohalobium
retbaense DSM 5692]
Length = 325
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 85/294 (28%), Gaps = 17/294 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+++ T + + + WG T + + L + E R L + + + G
Sbjct: 10 SAMNTPLVYVKLLATVSFWGGTFVAGRVLSQDLGPFEAAFLRFLIASVFLVGLTLRVEKG 69
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L +++ AT + + F L T + P +G++
Sbjct: 70 LPRLP----WRDVFVVMILGATGVFAYNACFFAGLQTVPAGRAALIIASNPACIALVGAL 125
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFAR 185
LK+RL LQ + L + ++ G + +A + +
Sbjct: 126 VLKQRLRALQAVGVGLCLAGAAVVISDGAPWQLWRGGVGVGELFILGCVASWVAYSLVGK 185
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ S C+ L G + + F
Sbjct: 186 VAMHRLSPFAAVTYSCLAGTLFLAIPASGEGLWGHIWQFSGLQWGCLAYLGICGTGLGFS 245
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ GIK + + P+ I++ L + I + V + + +
Sbjct: 246 WYYQGIKAIGPARASVFINFVPVTAILAGFVFLDETIGASLIVGALCVGVGVYL 299
>gi|239501387|ref|ZP_04660697.1| DMT family permease [Acinetobacter baumannii AB900]
Length = 300
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 101/287 (35%), Gaps = 9/287 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ L +GTL + A +L G L+ S + ++ R L S + Y+
Sbjct: 1 MDDHHLKRKVGTLEMVVAMLLSGSIGLFV-IKSGQSPVNIVFFRCLISALCLIPICYYYG 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
K K + ++V S ++ +W A L + Y V P + +FLG
Sbjct: 60 H----FKKVYFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLG 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ E+LN ++ ++ + L+++ + S +
Sbjct: 116 ALVFHEKLNKNDLLWTIVAFIGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITK 175
Query: 196 FFIEMCVLAIPALF----YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
L I + + F + L +F++ + I
Sbjct: 176 KLSNTPPLLIVFIQTLSGAIAMTPFMSVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
K+ L+ + I+ + P+ IV F + + + + G++++ ++
Sbjct: 236 KKIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVL 282
Score = 36.0 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 7/146 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
GL + + ++G V A L+ I+ L T+ L L ++ + L + +
Sbjct: 143 GLGSASVNSNELVGLGLVLIATTLYSISVLITKKLSNTPPLLIVFIQTLSGAIAMTPFM- 201
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S+ ++ + + ++ A + A+ + F+ P+ ++
Sbjct: 202 ------SVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIKKIPLNNIAILSFIYPISTI 255
Query: 133 FLGSVFLKERLNHLQIIAALLIILSL 158
+ F L Q++ A LI+L +
Sbjct: 256 VIDYFFFDHVLTSTQVLGAGLILLGV 281
>gi|254518956|ref|ZP_05131012.1| integral membrane protein [Clostridium sp. 7_2_43FAA]
gi|226912705|gb|EEH97906.1| integral membrane protein [Clostridium sp. 7_2_43FAA]
Length = 302
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 108/289 (37%), Gaps = 2/289 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G LF + I++G TP + L + R L ++P +FF + Y L +
Sbjct: 2 KIKGILFTILSAIIFGFTPALANITYEFGNNSLSMTFFRNLLAIPILFFILKYKRISLKV 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K LK+ + ++ + T ++ + + + FV K
Sbjct: 62 EKKELKHIFILSLIGVALTTALLYSSYSYIGVGVATTLHFMYPIFVALACRFIFNEKLGK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++ L + + + + + + L++L +T++ Y + + + +
Sbjct: 122 RKVLSLVMAFLGVALFMDMKSSNNLLGALMALISGLTYAFYIVYLEKKELVKINPYKLSF 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+++ + ++ N F G F L L +I L + +F G+ ++
Sbjct: 182 YIVSFVSFEMLIGNIFGGYIKFNLSLKIYILMIIISLLTSIVGVILFQVGVSIIGSTSAS 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I P+ ++S + + + ID + I ++ IA+ + + N
Sbjct: 242 IFSLFEPITSVISGLLLFNESIDIKKIIGCLVIFIAVTYLAIESRSNEK 290
>gi|226357107|ref|YP_002786847.1| hypothetical protein Deide_20720 [Deinococcus deserti VCD115]
gi|226319097|gb|ACO47093.1| conserved hypothetical protein; putative membrane protein
[Deinococcus deserti VCD115]
Length = 326
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 82/289 (28%), Gaps = 10/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P G L + LWG T + L EQ+ +I+ R + + + +
Sbjct: 2 TPHARGILLLVLVTALWGSTFAVVKELGEQLPPSVLIAWRFTLATVVLLPVLAVMARKAP 61
Query: 80 LLKDTLKNPKAVGMLV------FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
A L +G AL T +F ++ V+
Sbjct: 62 TRSIPATGGFAGWKEGLARDGLILGAWLIAGYGTQTVALQTTSANRAAFFTALSVVLVPV 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSG---IPLLSLAIAVTWSAYCFARKTIPV 190
+ + R+ +A L + L +++ G + A
Sbjct: 122 WLTFAQRRRMPLSLWVALPLAVFGLGLLSWEGGALVVGDAWALACAVTYAGFIVALEGTA 181
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + +W G S + L L + + + G
Sbjct: 182 TRHHPLQFTFAQVLVVTVLAWIWAGLSAPGQLWPPESAWAPLLYLGVLATAVTTLLQTIG 241
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ P+ S ++++ + +VV+A V+
Sbjct: 242 QRTVSAAEASLIYALEPVTATFFSFLLIQEKVGLRGAAGGLLVVVATVL 290
>gi|310778154|ref|YP_003966487.1| protein of unknown function DUF6 transmembrane [Ilyobacter
polytropus DSM 2926]
gi|309747477|gb|ADO82139.1| protein of unknown function DUF6 transmembrane [Ilyobacter
polytropus DSM 2926]
Length = 308
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 93/283 (32%), Gaps = 18/283 (6%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + I + + +F + + V + R L + +F + + L + K + +
Sbjct: 22 MVISSIFFSGAFIAGKFSIMEFPVFSLTFFRFLIASVILFLIMHFRGENLKISKSEIPHV 81
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ +L L AL TS P+++ L S+FLKER++
Sbjct: 82 IVLSLLGMVGYHLFF-----FTALKYTSSVNTSLIAASNPIMTTVLASIFLKERVSLKAA 136
Query: 149 IAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ + + ++ + G + +A+ + + +
Sbjct: 137 FGIVISFIGVAVIVTNGSYEVLKNMNFNIGDLYMLIAVLSFSCYFILLKNVLSRIPPMKL 196
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + L V + L + + + +KR
Sbjct: 197 TAYVFLFCVLILLPAVIIENPASYMGSVTIKGWGSLLYMATFASVIAYMLQQVSVKRIGP 256
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + PL +V + FIL + I + + +++ +++
Sbjct: 257 SKTSLYINLIPLFSMVMAYFILGEKITIQKILAAAMIISGVII 299
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 33/117 (28%)
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F + A + GE+ + ++ L F +K
Sbjct: 44 PVFSLTFFRFLIASVILFLIMHFRGENLKISKSEIPHVIVLSLLGMVGYHLFFFTALKYT 103
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ + P++ V + LK+ + I I + V + KN
Sbjct: 104 SSVNTSLIAASNPIMTTVLASIFLKERVSLKAAFGIVISFIGVAVIVTNGSYEVLKN 160
>gi|260554517|ref|ZP_05826738.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
gi|260411059|gb|EEX04356.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
Length = 300
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/286 (15%), Positives = 101/286 (35%), Gaps = 9/286 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ L +GTL + A +L G L+ S + ++ R L S + Y+
Sbjct: 6 DDHHLKRKVGTLEMVVAMLLSGSIGLFV-IKSGQSPVNIVFFRCLISALCLIPICYYYGH 64
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K K + ++V S ++ +W A L + Y V P + +FLG+
Sbjct: 65 ----FKKVYFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLGA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ E+LN ++ ++ + L+++ + S +
Sbjct: 121 LVFHEKLNKNDVLWTIVAFIGLIVIIGLGNASVNSNELVGLGLVLIATTLYSISVLITKK 180
Query: 197 FIEMCVLAIPALF----YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L I + + F + L +F++ + IK
Sbjct: 181 LSNTPPLLIVFIQTLSGAIAMTPFMSVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ L+ + I+ + P+ IV F + + + + G++++ ++
Sbjct: 241 KIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVL 286
>gi|149910190|ref|ZP_01898836.1| putative permease [Moritella sp. PE36]
gi|149806776|gb|EDM66740.1| putative permease [Moritella sp. PE36]
Length = 285
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 103/289 (35%), Gaps = 9/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + A +L G T L+++ + ++ L++ R + + + + L L
Sbjct: 3 QRKQGLWALHSATLLLGGTTLFSKLI-PLTALDITILRCVIASTVLCLLLKVTKQPLRL- 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
G V A ++ HW F + + +++ PV++VFL +F +E
Sbjct: 61 ----NKLSDYGWAVLLAALVGAHWVTFFLGMQLSTIAIGLIAFYTYPVMTVFLEPLFNRE 116
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLS---LAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ I++AL+++ + ++ + + ++ + R + +
Sbjct: 117 KIQGQDIVSALVVLTGISLLVPELSLENDVTLGIISGISSAFLFTLRNILYKRKLSHYSG 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + F + + N TL ++ + + ++ K T
Sbjct: 177 PHTMFYQTLFTACMLSPFLSVDLAEINNDNWTLLVVLGICFTAMPHTLLVTALRYLKAKT 236
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
VG++ PL + ++ L + + +VV A +
Sbjct: 237 VGLIACLQPLYGSLLAIPFLGEVPNAATITGGALVVSAALFETWNAGKK 285
>gi|323701531|ref|ZP_08113204.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
gi|323533540|gb|EGB23406.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
Length = 303
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 96/284 (33%), Gaps = 12/284 (4%)
Query: 25 MGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G L V + +GI PL + VSV ++ R + + F ++ +L +
Sbjct: 6 LGALLVIISAACFGIMPLLALTAYAGGVSVPTLLFWRFVLAALIFFAYLLVVCKRFNLTR 65
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + + + ++ Q L ++ P++ V L + KER
Sbjct: 66 NN-----LFSLFLLGGVLYTLQSSTYFSSVKFIQPSLAVLIFYTYPILVVILSFLIEKER 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAYCFARKTIPVGSSEGFF 197
L + + +L I L+++ S + A + V
Sbjct: 121 LTKQTLASIILCISGLIMVLGTSLGEIRWPGVLLAFAAALVYSLYNILGNRVVKQLPPVV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V ++ + V GG ++ L + G++
Sbjct: 181 ATAFVCLFASVSFSVIGLVQGGINYNFSWSVWLAVLGISFFSTIVALLTYFAGMELIGAG 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ P++ I+ S +L + + ++ + V++ ++ +
Sbjct: 241 KASILSTMEPVVTILCSAILLHERLTLLQGMGGMAVLLGAILVV 284
>gi|297198184|ref|ZP_06915581.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|197714671|gb|EDY58705.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length = 308
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 87/305 (28%), Gaps = 11/305 (3%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGV 67
+ +S ++ LP G L++ A WG + + + + R L +
Sbjct: 3 REHVSHASSGLPVGRGLLYLIVAGTTWGTAGAVASLVYRASDLGPVALSFWRCAAGLMVL 62
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+ + + + L S LAV + A+ + + +
Sbjct: 63 LAVRLVRPRARTAVPEPLGRRALRVGA--SGIALAVFQTAYFAAVRSTGLAVATVVTLGA 120
Query: 128 PVISVFLG-SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAY 181
+ V LG + L ERL +A + L ++TL + +
Sbjct: 121 GPVLVALGARLVLGERLGRGGTVAVTGALAGLGVLTLGGADASVRPLGVLLGLLSAAGCC 180
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
T G+ + H + L + +
Sbjct: 181 VMTLITRAAGAESSGTSVAVFAVTSLCLLPLALAEGLLPHTARPALLLGLLAYLATVPTA 240
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ + +TV ++ P+ +V + + + + +++ A+
Sbjct: 241 LAYGLYFAAAAVVRSTTVSVIMLLEPVSAAGLAVVLFGERLTPAVLLGTLLMLGAVAGLA 300
Query: 302 LPTVI 306
+
Sbjct: 301 VTETR 305
>gi|206975398|ref|ZP_03236311.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217960786|ref|YP_002339350.1| transporter, EamA family [Bacillus cereus AH187]
gi|229139989|ref|ZP_04268553.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST26]
gi|206746300|gb|EDZ57694.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217066704|gb|ACJ80954.1| transporter, EamA family [Bacillus cereus AH187]
gi|228643504|gb|EEK99771.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST26]
Length = 294
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKITEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T++ + + S TP V ++ L
Sbjct: 62 KT-VTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSNPIEHMNLYVVLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVFITTFEK 293
>gi|153011093|ref|YP_001372307.1| hypothetical protein Oant_3772 [Ochrobactrum anthropi ATCC 49188]
gi|151562981|gb|ABS16478.1| protein of unknown function DUF6 transmembrane [Ochrobactrum
anthropi ATCC 49188]
Length = 306
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 95/285 (33%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F +Y + ++ +FL+ +S EV + + F+ +
Sbjct: 2 LYGIFLAFASYAAFAVSDACVKFLDGTLSPYEVAFF-----GAVLGLLAIPFTKKADDVW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L VFLKE+
Sbjct: 57 LDMFRTSNIKMWLLRTVTAAMGTIGSVTAFTHLSMAEAFALIFLLPAYVTILSVVFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A L+ + +LI+ L + + A I + +
Sbjct: 117 VGWRRWSAVLIGFIGVLIVLRPGFRELSIGHLGALAAGMGGAMSIIIFRVMGKHEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ GF + N ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLVGPIIICGFLMVPSYEPPNTEQWVYLAGYGLLAALANILLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ ID I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDMPMLIGIVLITISGLFTFIRERQR 281
>gi|37528410|ref|NP_931755.1| hypothetical protein plu4591 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787848|emb|CAE16963.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 331
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 90/284 (31%), Gaps = 20/284 (7%)
Query: 32 CAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
I+WG T + +++ + L S R + + + +V + +
Sbjct: 22 LVAIIWGGTFVAGRYISVETPPLLSASLRFILAGMTLIIFLVLSGKMFVKINLSQLLK-- 79
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
++ + + + FF Y L S + P + +F KER + L+I+
Sbjct: 80 --IIGLGLSGIYTYNLFFFYGLHHTTASRASLIVALNPAVMAIFSYLFYKERQSPLKILG 137
Query: 151 ALLIILSLLIMTLH--------------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L +L +I+ + ++ + +G
Sbjct: 138 IILCLLGAMIVIFSKTPQLTVGAEGNWLGDTLIFGCVLSWVAYSVFCKNIVNQIGPLHTV 197
Query: 197 FIEMCVLAIP-ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ AI + S L L + ++ + + GI+R
Sbjct: 198 TYSILAGAIMLTATAIFTGQMSLSAIHTLPITDLYSLLYLGAVGSAVAYIWYYDGIQRIG 257
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ PL ++ +L + + I +V+ +++
Sbjct: 258 STRSGVFIALNPLTAVLLGAVLLDERLTFPMFIGGALVIGGILI 301
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 11/131 (8%), Positives = 35/131 (26%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ F + + + +++ SG + +
Sbjct: 22 LVAIIWGGTFVAGRYISVETPPLLSASLRFILAGMTLIIFLVLSGKMFVKINLSQLLKII 81
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F YG+ S ++ P +M + S K+ ++ + +
Sbjct: 82 GLGLSGIYTYNLFFFYGLHHTTASRASLIVALNPAVMAIFSYLFYKERQSPLKILGIILC 141
Query: 294 VIAMVVYLLPT 304
++ ++ +
Sbjct: 142 LLGAMIVIFSK 152
>gi|331270543|ref|YP_004397035.1| transporter [Clostridium botulinum BKT015925]
gi|329127093|gb|AEB77038.1| Transporter [Clostridium botulinum BKT015925]
Length = 282
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 97/287 (33%), Gaps = 6/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ + + + + ++ V+E + R SL F A+ +
Sbjct: 2 NNKTKAVAYMLISALGFAFMGAMVKLAGKLPVIEKVFFRNFISLFVAFAAL------RKV 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ A + + Y++ ++ ++P +FLK
Sbjct: 56 HGPMFGKRENQKYLLARALLGLTGMFLYFYSIDNLVLADSAMLNKLSPFFITLFAIMFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L +++I+ +++ + +++ + A+A SA V +
Sbjct: 116 EELTGMKVISMIIVFIGAILVIKPQWNLSIIPALAGFISAAFAGGAYTIVRYLKDKESPS 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +L V+ F + + L+LI G+ + +Y K A S V
Sbjct: 176 TIVFYFSLVSVIGALPFMLAKFVMPSKIQFLYLILTGVFAAIAQFSLTYSYKYAPASEVA 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + V FI + D + + I+++ V L
Sbjct: 236 IYNYVNIVFSAVIGFFIWGEIPDKLSILGGVIILLMATVVYLHNRRK 282
>gi|46203400|ref|ZP_00051584.2| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Magnetospirillum magnetotacticum MS-1]
Length = 295
Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 86/295 (29%), Gaps = 9/295 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + A + + + L V L R ++ V +
Sbjct: 6 RRLAGIALMCAAPVFFAGLDTTGKVLAGAGVDPLLTTFMRYAVNVALVTAFL------NP 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + + + + +L AL + Q T F P+ L L
Sbjct: 60 VTRPGVAHSRRLPLQILRSLLLFGSTACNFLALRSLQLAETVSIQFAAPLTVALLAGPLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + ++ A L +LI+ + + + C+A + +
Sbjct: 120 GEWSSRTRLAAVAAGFLGVLIIVRPDAVVAKPAMLFSLGNMLCYAFYVLVTRKLAAYDST 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLNSFVFCIFSYGIKRAKLST 258
+ L +V + L+ L + + RA +
Sbjct: 180 ATTVFYTGLGGLVVMSPLLPWVWTTPGSGTVWALLLAVGLFGTVGHWLLVLAHARAPANL 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + YT L ++ + G++V + +V L + + +
Sbjct: 240 LAPLIYTQILWSVLLGYLVFGDVPSVWTLFGAGVIVASGLVLLSEDALARRRTRR 294
>gi|282855586|ref|ZP_06264901.1| transporter, EamA family [Pyramidobacter piscolens W5455]
gi|282586569|gb|EFB91822.1| transporter, EamA family [Pyramidobacter piscolens W5455]
Length = 283
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 83/279 (29%), Gaps = 14/279 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A +++G L+ + + +S ++ R + A ++ +
Sbjct: 6 WLMAGAMLIFGSIGLFARRV-PLSSAQISLLRAAVGGLCLLAAAAGNGLSWKRIRANARY 64
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + ++ F A + Y++ PV + L L+E+L
Sbjct: 65 LL------MAGAFIGMNLILFFEAFRWTSIATGTVCYYLAPVFMLCLAPWLLREKLARRT 118
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV----- 202
++ + + L + SG + + + V +++
Sbjct: 119 VLCVFVSLCGLACVVGGSGGAGRNDLLGIACGVGAAVFYACAVMANKFLRGVTPYESTAA 178
Query: 203 --LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L G L + + ++ ++R T
Sbjct: 179 ELLLAATFLAPYVLVKGGVPLAGLDGAGWFCLAALCLIHTGLAYLMYFTALRRLPAQTTA 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y PL I+ S IL + + ++ +++ A +
Sbjct: 239 ALSYIDPLSAILMSWLILGESMTPLQLAGGALILGATFL 277
>gi|262376042|ref|ZP_06069273.1| permease [Acinetobacter lwoffii SH145]
gi|262309136|gb|EEY90268.1| permease [Acinetobacter lwoffii SH145]
Length = 310
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 117/294 (39%), Gaps = 5/294 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G A +++G+ ++T FL+ + + + R+L +LP + + + S+
Sbjct: 3 KGIALSVLASVVFGVLYVFTPFLQPLDSEQTFAWRMLATLPFLTAFMWWSGDLKHISSIF 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K L+ P + L+ S+ + F++ + +G S YF+ P++ V +G V KE
Sbjct: 63 KRVLRQPSFLIWLLISSLLCTTQLWLFLWGPINGRGLEVSLGYFLLPLVMVLVGCVLYKE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+L+ Q++A L +L + G F + G F
Sbjct: 123 KLSSFQMVAVALAMLGVGHEIWRIGSIAWETVYVALAYPLYFFMRRKFATDHLGGFWWDL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P FY+ + + L L++ + + G+
Sbjct: 183 FLILPVAFYLGFIYSDSMPLMLNHSHLILAVLGLG-FLSALGLGSYILASRYLPFVIFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ Y P+L + + L + +++ + + + +A+++ ++ +++ K + ++
Sbjct: 242 LSYLEPVL-LAFASMALGERVESGEWLTYIPIWLAVLLLVVEGILHLLKQRKQQ 294
>gi|223038614|ref|ZP_03608907.1| transporter [Campylobacter rectus RM3267]
gi|222880016|gb|EEF15104.1| transporter [Campylobacter rectus RM3267]
Length = 303
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/301 (10%), Positives = 89/301 (29%), Gaps = 11/301 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S G +LWG + + Q+L + VS ++ +R+ + + +
Sbjct: 3 SQSEFFGVFITLLGGVLWGFSGVCGQYLFTQKGVSADWLVPYRLSLAGLAMVAYYLA-RS 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L +L+++ L + + Y++ + + + P + + +
Sbjct: 62 PRAALAPLKDRALLPQLLIYAFFGLMMTQYAYFYSIELSNAAVATVIQYSAPALILAVVC 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIP 189
+ +++IA +L +L ++++ H L + ++
Sbjct: 122 FLQRRAPKKVELIALILAVLGVMLLATHGDPGSLVISAEALVWCLISALGVVIYSLIPTK 181
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + L F +
Sbjct: 182 LNQKYPIALNLGWGMAIGGGALALYTRVWRLNGVSDAQGFAALAAVVFLGTICAFSFYMM 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G+K S ++ P+ + F L + + F +++ + +
Sbjct: 242 GLKIIGASRASMIACIEPVSAAAFAYFWLGTELVFLDFTGFVLIISCIFLLARDDKKQKR 301
Query: 310 K 310
K
Sbjct: 302 K 302
>gi|172062782|ref|YP_001810433.1| hypothetical protein BamMC406_3750 [Burkholderia ambifaria MC40-6]
gi|171995299|gb|ACB66217.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria MC40-6]
Length = 307
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/301 (10%), Positives = 83/301 (27%), Gaps = 6/301 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + L + A +WG + + L+ + R L + + +
Sbjct: 1 MKPEARKHLRANLLMLGAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLIPLLTFN 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L + P + + +LAV + L + F V+ V L
Sbjct: 61 TASRTQLAAIRREPALLAPGLALGALLAVSISLQQFGLQYTRIANAGFI-SSLYVVIVPL 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
VF++ R+ ALL + L ++ A
Sbjct: 120 IGVFVRHRIGAGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHFA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + L G L + +
Sbjct: 180 KRHDPLVLAFLQFVTCGVVCLAAGLVIEPVSVAMLRSALPTLLYGGLLSVGVGYTLQVVA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A + ++ + ++ L + + + +++ ++ L ++ K
Sbjct: 240 QRDAAPAHAAVIFSMEGVFAAIAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARK 299
Query: 311 N 311
Sbjct: 300 K 300
>gi|37676406|ref|NP_936802.1| hypothetical protein VVA0746 [Vibrio vulnificus YJ016]
gi|37200948|dbj|BAC96772.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 298
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 93/304 (30%), Gaps = 16/304 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF 74
N +G ++ + + + + +++ + + E+++ R L SL + +
Sbjct: 3 SNLRSAFPLGVRYMILSALGFALMSASVKYVSVHGIPLFEIVAARALVSLIISYLDV--- 59
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
K L + + YA+ + +V PV + L
Sbjct: 60 -----KRKGISVWGNNKRWLFARGAVGTLALMCVYYAVTALPLAEATILQYVHPVFTALL 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTI 188
+FLKER+ + L +L + M S G + A+ + +
Sbjct: 115 AVLFLKERVQPATLACITLCLLGVFTMVYPSFDASGVGELPMLSVGIALLGAFGSSIAYV 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V ++ L + + G+ F + +I L LI G+ +
Sbjct: 175 IVRKLSRTEDSSVIIFYFPLVALPVSAMLIGDDFVVPDITLILILILVGIFTQVGQFGLT 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ Y + + V + + + ++V ++ +
Sbjct: 235 KAMQTQTAGNASAYSYVQIVFSALLGVVLFNEVPSIWTLLGGSLIVTGALINVFGPKSKW 294
Query: 309 GKNK 312
N+
Sbjct: 295 LANR 298
>gi|188584988|ref|YP_001916533.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179349675|gb|ACB83945.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 309
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 88/286 (30%), Gaps = 14/286 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G + VF +WG T + + ++++S + + + + GL +
Sbjct: 10 KIGYVLVFLGASMWGTTGTIGNPIFETNLDTMQIVSAQTSIAASTLIVYLFITKPGLLKI 69
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K ++F ++ + A+ F P+ FL E
Sbjct: 70 ----KFSHIPFFIMFGLITQVIYAYSYFNAIRYIGTTGAVILSFTAPIFVCLYSRCFLDE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSS 193
+L +I+ I+ + I + + A I +
Sbjct: 126 KLTKEKILGLTFSIIGCFLTVGGFNIDQYDITPLGIAFGLMTGLSFASYTVMGKIALSDY 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L A+ V+ GG L + F ++ G+ +
Sbjct: 186 SSLTVTTYSLFFGAITLSVFYPPVGGYLSDFDTTLWLSILGLGLIPTVLAFIFYTNGLDK 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ S I+ + + + +L + +R I +V+I ++V
Sbjct: 246 IESSKASIISTAEVISATILAYLVLGEEFTPLRVIGIFMVIIGVIV 291
>gi|188587399|ref|YP_001918944.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179352086|gb|ACB86356.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 317
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 87/285 (30%), Gaps = 14/285 (4%)
Query: 36 LWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
WG+ L+ L S L+V++ R + + + + G + +
Sbjct: 19 FWGVIGLFIVPLYQFGFSPLQVVALRAISASILMLIYV----GIFNPSALKISLKDIWYF 74
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
+ + + A+ + + P L +F KE L ++ A
Sbjct: 75 IGTGIVSIVFFNWCYFTAIQEMSLSIAVVLLYTGPAFVALLSYIFFKEPLTGRKLAALAF 134
Query: 154 IILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++ +++ S + LL + + I +
Sbjct: 135 TLIGCMLVTGLLPANEISVSPLGLLLGIGSGFFYGLYSIFGKAASYRYSSLTITIYTFVF 194
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L + +G F+ L + + +++ G+ R + S I+
Sbjct: 195 AGLALLPMSGVIANMGAFVNPWVLLSILGLGLISTVLAYILYTLGLSRIESSKASIIATI 254
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P++ + + + + + + IV+ A+++ T K
Sbjct: 255 EPVVAAILGRIVFGEQMTLWQGVGMLIVISAVILVSERTGETEKK 299
>gi|78043353|ref|YP_359327.1| hypothetical protein CHY_0469 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995468|gb|ABB14367.1| putative membrane protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 290
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 99/287 (34%), Gaps = 14/287 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + A LWGI T++L + + ++ R+ S +F + +
Sbjct: 4 NERIKGLVLAILATSLWGINGTVTRYLLINNLDPVVLVQIRLTVSALLLFILLFILKINV 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +D + + +L+ L++ + Y + F +++PV G F
Sbjct: 64 KISRDDIIS-----LLILGIFGLSLVQMTYFYTISLTNVATAVFLQYLSPVFVALYGVFF 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV-------G 191
E + ++ A + +L ++ +G L ++ ++ +
Sbjct: 119 KAEEITGSKLTAIGMSLLGSFLIVTQNGEIQLPFMGLLSGLLSALSQSFYIIYGKKVLNR 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + L ++++ H F ++ +
Sbjct: 179 FSPITVLAYGWLFGAVFWWLLIPPNKALMHQVFTLRDVFGISYVIIFATVIPFLLYFESL 238
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
K +T+ ++ P++ ++ + +L + + + T+ +++ A+
Sbjct: 239 KYLNSTTMSVVSLVEPVVAVIVAYLVLGEKLTPLSTLGAVLILFAIY 285
>gi|256829603|ref|YP_003158331.1| hypothetical protein Dbac_1824 [Desulfomicrobium baculatum DSM
4028]
gi|256578779|gb|ACU89915.1| protein of unknown function DUF6 transmembrane [Desulfomicrobium
baculatum DSM 4028]
Length = 330
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 83/294 (28%), Gaps = 17/294 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F +LWG + + ++ + + V+ R+ S + L
Sbjct: 9 FISLFVGMLLWGSSFVAFKYAVMFFDPIVVVFMRMALSAFLFLLVL------PRWRPRNL 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ M+ + ++ F AL PV+ FL ERL
Sbjct: 63 RREDLGFMIFMALCEPCFYFVFEGQALTMTSASQAGMVAATLPVLVAVCAGFFLGERLTA 122
Query: 146 LQIIAALLIILSLLIMTL----------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+L + ++ +++ L L + Y + K + S
Sbjct: 123 RSWSGLILALAGVVWVSVSGVATEAAPRPLFGNFLELLAMFCAAGYTVSMKKLCSRYSPW 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F + + F + + P L ++ + ++YGI +
Sbjct: 183 FLTAVQSMVGTVFFLPLLFLPTTVMPQAFPPGPSLAVLYLCVCISIGAYGFYNYGISKLP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ ++ L + + + +V +++
Sbjct: 243 AWQASAFVNLIPVFSMLLGWLCLGERLTAWQLAGVAVVFAGVLLCQQWPERERK 296
>gi|78067139|ref|YP_369908.1| hypothetical protein Bcep18194_A5670 [Burkholderia sp. 383]
gi|77967884|gb|ABB09264.1| protein of unknown function DUF6, transmembrane [Burkholderia sp.
383]
Length = 309
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 92/295 (31%), Gaps = 16/295 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
+ S + GTL+V + +G ++ ++ V VL ++ R +
Sbjct: 2 TATTRPSSAALQGTLYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAIA 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + ++ A + AL Q L + ++ P
Sbjct: 62 RHRRVAWP------RGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFV 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
L + +L ERL + +A +L + +M L +A+A+ +
Sbjct: 116 TLLAAWWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALAAAVIYSLYIVGGTK 175
Query: 192 SSEGFFIEMCVLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
++ G I A+ V F + L +
Sbjct: 176 ATRGVDPLATTAIICLSATATLVAIAVVRTAAFGAPPRWPATAGGWASMLAIALVSTVAA 235
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
F G++R + ++ P++ + + + + + ++ ++ A++
Sbjct: 236 MLAFFAGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVL 290
Score = 39.5 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%)
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + L + ++ A+ S V ++ Y P + + + +
Sbjct: 63 HRRVAWPRGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWW 122
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPT 304
L + + + + + V + +
Sbjct: 123 LGERLTRAKAVALVLCVAGSALMVGGG 149
>gi|168261862|ref|ZP_02683835.1| RarD protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|205349258|gb|EDZ35889.1| RarD protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 304
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + A+ + + D
Sbjct: 6 RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIP-LLLAVRFLFRQRTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 VWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDSGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|169349748|ref|ZP_02866686.1| hypothetical protein CLOSPI_00486 [Clostridium spiroforme DSM 1552]
gi|169293823|gb|EDS75956.1| hypothetical protein CLOSPI_00486 [Clostridium spiroforme DSM 1552]
Length = 289
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 101/289 (34%), Gaps = 11/289 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + I++G TP+ + + + + R L+ +P +F I +
Sbjct: 4 RGYFLTILSAIIFGFTPILAKITYNMGSNGITLAFFRHLFVIPILFLIIKLLKINYKITL 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ LK V A + Q + +F+ P+ + + KE+
Sbjct: 64 EQLKKIILV-----GVIGNAFTVAMLYTSYSYIQVGSATVLHFLYPMFVSLICFFYYKEQ 118
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT----WSAYCFARKTIPVGSSEGFFI 198
L+ II ++ + +L + L +A+ ++ Y + + + + + +
Sbjct: 119 LSKAVIICLVIASIGILFFIEGGNTSFIGLFLALFSGITFAYYIVGVEKLGLQTINPYVL 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ A+ ++ S L + I L + GIK +T
Sbjct: 179 NFYFAIVIAITLLIIGIISNQLVLSLPMKAYSYSFIIAILTSIIGIICLQQGIKYLGATT 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I+ P+ ++ + IL + + V+ I++ A++ ++ +
Sbjct: 239 ASILSMFEPVTSVIFGIIILHERLTIVKASGCLIILGAVIGLIVSSSKK 287
>gi|167762767|ref|ZP_02434894.1| hypothetical protein BACSTE_01125 [Bacteroides stercoris ATCC
43183]
gi|167699107|gb|EDS15686.1| hypothetical protein BACSTE_01125 [Bacteroides stercoris ATCC
43183]
Length = 321
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/304 (11%), Positives = 94/304 (30%), Gaps = 15/304 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + A +G+ PL+ L +SV V+ +R +++ + +
Sbjct: 22 MTNNRLKGFTYGAVAAASYGMNPLFALPLYGAGMSVDSVLFYRYFFAVVMLGILMKVKKQ 81
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L K + + + + F + + S FV PV+ + +
Sbjct: 82 SFALKKADILPLAVM------GLLFSFSSFFLFESYNYMDAGIASTILFVYPVLVAIIMA 135
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIP 189
VF E+++ + + + L + ++ LS+ + ++ Y
Sbjct: 136 VFFHEKVSFITMFSIALAFTGISLLYEGGDGKTLSMLGVLFVILSSLTYAIYIVGVNRSS 195
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L YVV F + L + +
Sbjct: 196 LKELPTAKLTFYALLFGISIYVVRLDFCTALQPVPSPVLWANVLSLALFPTIISLVLMTL 255
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I + I+ P+ + V + + + + +++ A+ + + +
Sbjct: 256 SIHLIGSTPAAILGALEPVTALFFGVVVFGEQLTPRIMLGVLMILTAVTLIIAAKPLLQL 315
Query: 310 KNKT 313
+
Sbjct: 316 VRRR 319
>gi|84686335|ref|ZP_01014229.1| Putative transporter, RarD family, DMT superfamily protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84665518|gb|EAQ11994.1| Putative transporter, RarD family, DMT superfamily protein
[Rhodobacterales bacterium HTCC2654]
Length = 310
Score = 80.0 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 95/304 (31%), Gaps = 13/304 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G A + + I + E V EV+ R +++P + + Y
Sbjct: 5 RQRTGFGISLKIGAVLCFTIMGALIKGTEGRVPTGEVVFFRSFFAIPIMIGWLAYVGQLH 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + ++ I G AL + + TP+ L ++
Sbjct: 65 EGVRTS-----RPFGHMWRGFIGTTAMGLMFTALTLLPLPEVTALQYATPLFITILAAIL 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L ER+ ++ A L+ ++ +L++ +G A+ + SA A + V
Sbjct: 120 LGERIRLFRMSAVLIGLVGVLVVLYPRLSGFGEAGGAESLGALIMIVSAVAAALAQVQVR 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
V + ++ + + + D LI GL+ + S
Sbjct: 180 RLVATERPATVALYFSFSSTLYALLTLPFGWVVPGGMDAALLILTGLVGGVGQGMLSSSY 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ A S + +Y + + + + IV+ A ++ +
Sbjct: 240 RYAPASVIAPFDYASIFFATALGMIFFDEVPTRTTLLGAAIVIAAGILIIWRERKLGMNR 299
Query: 312 KTKK 315
+
Sbjct: 300 AASR 303
>gi|219668624|ref|YP_002459059.1| hypothetical protein Dhaf_2596 [Desulfitobacterium hafniense DCB-2]
gi|219538884|gb|ACL20623.1| protein of unknown function DUF6 transmembrane [Desulfitobacterium
hafniense DCB-2]
Length = 314
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 89/300 (29%), Gaps = 11/300 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAI 71
+N + GT+ I WG + Q+L + + V R+L + +F +
Sbjct: 12 KAQNIRTKAVRGTILTLIGGISWGFSGACGQYLFSVKGIDPHWVTVVRMLTAGLLLFCLV 71
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
++ + + K ++VFS L ++ A+ + ++ P++
Sbjct: 72 LFKYREQMVGLLSNK-RDRRTLIVFSIFGLIACQYTYLLAISHSNAGTATVLQYLGPLLI 130
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFA 184
+ + + +A L + ++ H L + +
Sbjct: 131 MIFVCGMDRRLPTKTEGVAIALAVTGTFLLATHGNVSNLVISTQGLFWGLMAALGLMLYT 190
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + G + + ++ L L + F
Sbjct: 191 IIPGKIINKWGSIVVTGCGMLMGGSILLVVIRPWQIPVSLDWQVFWGMLAIIVIGTVVSF 250
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ G+ ++ P+ + S F L + + F +++ +++
Sbjct: 251 TLYLQGVSDIGPVKASMIASVEPVSAALFSAFWLNTAFVWIDMVGFALIITTVILLTRQG 310
>gi|325264706|ref|ZP_08131435.1| integral membrane protein domain protein [Clostridium sp. D5]
gi|324029998|gb|EGB91284.1| integral membrane protein domain protein [Clostridium sp. D5]
Length = 316
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 89/294 (30%), Gaps = 20/294 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L ++WG T + T+ L+ +E++ R + + A
Sbjct: 1 MKNRNGAGHLAALFTIVVWGTTFISTKILLKDFQPVEILIIRFVIGYLLLLAA------- 53
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + +++ AL P + FL +
Sbjct: 54 KPGIIRLKDKKQEWVFAAAGLCGICLYFLLENIALTYTLASNVGVIISAAPFFTAFLTQI 113
Query: 138 FLKE--RLNHLQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFAR 185
F+KE RL + + I + +++ L+ + +S
Sbjct: 114 FMKEEGRLRLSFFLGFGVAIAGICMISFGGQRFALNPKGDLLALAAAFVWACYSVLTKKI 173
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + + + F G + L ++ F
Sbjct: 174 SSYGYSTIQTTRHTFGYGILFMIPAAFIFDFHLGITRLFDPVNLLNILFLGAGASAICFV 233
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+++ ++ + Y P++ IV SV IL + + + G+ ++ +++
Sbjct: 234 TWNFAVQILGAVRTSVYIYVVPVVTIVMSVLILHEELSGMAAAGAGLTLLGLII 287
>gi|167747137|ref|ZP_02419264.1| hypothetical protein ANACAC_01850 [Anaerostipes caccae DSM 14662]
gi|167654097|gb|EDR98226.1| hypothetical protein ANACAC_01850 [Anaerostipes caccae DSM 14662]
Length = 287
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 88/282 (31%), Gaps = 10/282 (3%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
F A +L+G + ++ ++ E++ R L + ++ + K
Sbjct: 9 FTALLLFGSNGIVASYIL-LNSYEIVFLRTLIGSLFLIAVFLFSGRKPQGFH----DKKH 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ + S + + W A T + + +Y+ PVI + + + +E + ++
Sbjct: 64 ILYITISGIAMGISWMLLYEAYKTVGVSIATLAYYCGPVIVMAVSPIVFQEHMTLKKLSG 123
Query: 151 ALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+I + ++ ++ I S G L I
Sbjct: 124 FAAVIAGMYLVNINGLFKTHVSAGLIFGILSAAMYALMVIFNKKAKSITGLENSAFQLII 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L V+ L + + I R +V + Y
Sbjct: 184 SFLTVAVFRQTKQSLDASSVFHSLFPVLFLGIVNTGIGCYFYFSSIGRLPAGSVAVCGYL 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
PL ++ S F L++ + V+ + +++ VV L
Sbjct: 244 EPLSALIFSAFFLRERLSAVQLLGAVLILGGAVVSELSRKKR 285
>gi|209550271|ref|YP_002282188.1| hypothetical protein Rleg2_2691 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536027|gb|ACI55962.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 299
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 86/293 (29%), Gaps = 11/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +++ A + G T + ++ + + + R + P + + L
Sbjct: 2 SRQVQGYVYLALAMLTVGSTVIASKLIASGLPPFTATALRFALAFPVLLVLMRASGVRLP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + + + + + I L PV+S + + L
Sbjct: 62 KLSRHDR----LILAIQAGAGSVGYTTLLISGLSLTSAADAGVVIGTLPVVSAGISILLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS------LAIAVTWSAYCFARKTIPVGSS 193
+ER +IA L +L + + G S + AV
Sbjct: 118 RERPGRGLLIAVALATAGVLSIAVTPGATGGSLAGNLLIFCAVVCEGLFILLNKRLKADI 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ I + V+ F + + + F ++ G R
Sbjct: 178 PPLAQSTLMAGIGFVVAVIPALFEARVTPDIPASAIIAAVYYALVPTVGGFLLWYAGAAR 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + AP+ ++ + IL +PI + V+ AM+
Sbjct: 238 VSGTEAALFTAVAPISAVMLAFLILGEPIGLNQIAGIACVLAAMLGLAFAGSR 290
>gi|307243129|ref|ZP_07525303.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
17678]
gi|306493489|gb|EFM65468.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
17678]
Length = 311
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 93/303 (30%), Gaps = 12/303 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + + I+WG+ ++ + +E + R L + ++F
Sbjct: 4 QKRKETKGIVLLTITAIVWGLAFIFQRTGMEHIGPFAFNFFRCLLGTSFLLLVSLFFRYK 63
Query: 78 LS------LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ K L + + L + F +++ F ++
Sbjct: 64 NAGHYKAANFKPKLVTKNLLVGGTLAGVSLFLAMSFQQVGMVSTTASKAGFIT-TMYIVL 122
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL----LSLAIAVTWSAYCFARKT 187
V L VF R + I L+ + L ++++ G + + I+ +
Sbjct: 123 VPLMGVFYGRRPSVKTWICVLIAAVGLYLISIKEGFVIEKGDFLVFISAILFGFQIVVVD 182
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I + + M + ++ F L + + F +
Sbjct: 183 IFAPKVDSIKMNMTQFITCGILSLIVVLFKETVTIEAVKAAGVAILYTGVISSGVGFTLQ 242
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
K + ++ T + +V+ + IL + + + ++VIA+V+ +
Sbjct: 243 VVSQKSISPTIASLIMSTEAIFSLVAGILILGERLVPKEMLGCLVMVIAIVLAQVDLPKR 302
Query: 308 SGK 310
K
Sbjct: 303 KKK 305
>gi|291482934|dbj|BAI84009.1| hypothetical protein BSNT_00887 [Bacillus subtilis subsp. natto
BEST195]
Length = 287
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 96/289 (33%), Gaps = 13/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G++++ A +WG + + + + E++ R + ++ + +
Sbjct: 2 KNTLLGSIYLALAASIWGGMYVVVKVVVAVIPPFELVWIRYVIAILALLIVGLIRKQSWK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + ++ + Y + + + TP V + L
Sbjct: 62 IHK-----RDLLLIVAIGIVGNTISIVTQEYGTMLSSAQMGAIITSSTPAFMVIFARLLL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGS 192
KE LN + + +L +L + + I + A+TW+ K +P
Sbjct: 117 KEPLNIKKGTSIILATTGVLFIVGNGHIDTSNQLGGISLLVAALTWALMSVLIKRVPNSY 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S + L L + + F +++ G++
Sbjct: 177 SPILVTTYSTFVAIVALTPFVKPSTIFTPLLLDPKILGGLLYLGIVSTACAFLLWNRGLQ 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S+ G+ + PL+ + +L + I I +++ +++ +
Sbjct: 237 LLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFLILSGVLLVI 285
>gi|158319893|ref|YP_001512400.1| hypothetical protein Clos_0855 [Alkaliphilus oremlandii OhILAs]
gi|158140092|gb|ABW18404.1| protein of unknown function DUF6 transmembrane [Alkaliphilus
oremlandii OhILAs]
Length = 311
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/305 (10%), Positives = 92/305 (30%), Gaps = 16/305 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G + + I+WG + + + +E + + R L + I+
Sbjct: 1 MNNKIIRGEILLIITAIIWGTSFVAQRVGMELIGPFTFTATRFLVGTLSLIPIILITDKV 60
Query: 78 LSLLKDTL----------KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
++ + + + L F L F +
Sbjct: 61 NKKEEENKTENKTEAETGIRKELLIGGIACGLALFSGISFQQAGLQYTTAGKAGFITALY 120
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCF 183
V+ LG +FLK++++ I +L +++L ++ + + + A
Sbjct: 121 IVLVPLLG-LFLKKKVDKNVWIGLILAVMALYLLCFTEDFSISKGDLIVLCGTVFWAIHI 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
G + + ++ F+ L ++
Sbjct: 180 LVIDHFAPKVNGLKMSCIQFFTAGILSLIIAFFTETIEMSAILNSAGPILYTGIVVVGVA 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ G + + I+ + +VS + +L + + + +++ A+++ +
Sbjct: 240 YTFQIIGQRGTNPTVAAIILSMESVFAVVSGMVLLGESMSLKEILGCILMLAAVLITQIQ 299
Query: 304 TVINS 308
++
Sbjct: 300 PTKSN 304
>gi|296132707|ref|YP_003639954.1| protein of unknown function DUF6 transmembrane [Thermincola sp. JR]
gi|296031285|gb|ADG82053.1| protein of unknown function DUF6 transmembrane [Thermincola potens
JR]
Length = 314
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 94/306 (30%), Gaps = 15/306 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + I WG++ L + + + + + R + +F + G
Sbjct: 1 MTKKRFWPFAAITLVMIFWGLSFLSIKVSVAALGPMSLALSRFAIASLLLFTFLKIREPG 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + M V + V++ F + S P++++ +
Sbjct: 61 TRLER-----KDTLLMAVSGIIGITVYFFFENNGVKLTTASTASIIIGTIPLLTILADFI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLL---------SLAIAVTWSAYCFARKTI 188
F R+ + + ++ + ++ SG + A +
Sbjct: 116 FCGNRVTWSKGFGVAMSVIGVYLIVKESGDLSFASRHFIGNLMMFGAAFSWVFYSLLTRP 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ V + F + L + L ++ + +
Sbjct: 176 LGQRYSRLAVTTYQTLFGTAAIVPFALFETNKWDALNWVVVGNVLFLGFFCSALGYYFYV 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y + + + P++ +VSS FIL + I + + I GI+V+A+ L +
Sbjct: 236 YAMGELGVDISSLFINLIPVVTVVSSYFILGEKITSTQMIGGGIIVLAVYFADLSNWLKK 295
Query: 309 GKNKTK 314
+ +
Sbjct: 296 DDRRKQ 301
>gi|225181639|ref|ZP_03735079.1| protein of unknown function DUF6 transmembrane [Dethiobacter
alkaliphilus AHT 1]
gi|225167620|gb|EEG76431.1| protein of unknown function DUF6 transmembrane [Dethiobacter
alkaliphilus AHT 1]
Length = 305
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 85/296 (28%), Gaps = 16/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + V WG++ T+ L ++ +++ R++ + + + G
Sbjct: 1 METNKIRAVVAVLATTFFWGLSFSSTKVLLTSLTAIQIAFFRLILASAVLGLVFLMSRSG 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ ML + +++ L S PV++V G
Sbjct: 61 R------VSRSDLPRMLAGGVFGIFLYFILENNGLRFTTAGTGSLIIATIPVLNVLAGVF 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTI 188
F +E+ + + L L ++ L + A
Sbjct: 115 FFREKNSWAGWVGVTLSFLGAWLLIRSGSGGALSLADLRGNLLVFGAACSWVVFTRINEP 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ I + ++ +G ++ + ++
Sbjct: 175 LMQKYNSLTINLYQSVAGMALLGLFIAPAGVNTAQFTGSVLFNLAYLGIFCSAVAYFLYL 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
Y +K S + P+ ++ ILK+ + T + + +V+ + + +
Sbjct: 235 YALKTLGSSAITCFLNLVPVFGVLGGAVILKEALGTGQILGGLVVITGVTLVTMAG 290
>gi|169831293|ref|YP_001717275.1| hypothetical protein Daud_1132 [Candidatus Desulforudis audaxviator
MP104C]
gi|169638137|gb|ACA59643.1| protein of unknown function DUF6, transmembrane [Candidatus
Desulforudis audaxviator MP104C]
Length = 310
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 98/296 (33%), Gaps = 11/296 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A P + L + + + ++T+ L + L + +R+ +++ + +
Sbjct: 3 ASPGAERPFVNPYLAIIIGVVAVSFSAIFTK-LAEAPPLVIAFYRLAFTVLLITPFALNR 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+G L + T + + +I +L ++ + P+ V
Sbjct: 62 AGRRELKQTTGRELALAALAGLLLAAHFA---VWISSLNYTTVASSTILVTMQPLFVVTG 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVT---WSAYCFARKT 187
+FLKE L +I A L + +++ ++ G L +A + + A
Sbjct: 119 AYLFLKEGLTARALIGAGLALTGSVLIGINDFQMGGTALYGDLLAFSGALFVAGYVLIGR 178
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
V A ++ N + + FL + +F
Sbjct: 179 TLRARLPIATYTFVVFGTAAAALLLANLATSTPLYPYPQQTWAWFLALAVVPTILGHMVF 238
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ ++ K + V + P+ + FI + ++ ++ + V++
Sbjct: 239 NWSLRYVKAAVVSVSILGEPVGATTLAYFIFGEVPGLLQLAGGAVIATGLYVFITS 294
>gi|229156973|ref|ZP_04285054.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 4342]
gi|228626463|gb|EEK83209.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 4342]
Length = 294
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKITEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T++ + + S TP V ++ L
Sbjct: 62 KT-VTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWEFQSNPIEHMNLYVVLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + F+L + +++ I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWFLLNETLNSNFFIGGILIICSVFITTFER 293
>gi|229174048|ref|ZP_04301584.1| Transporter, drug/metabolite exporter [Bacillus cereus MM3]
gi|228609380|gb|EEK66666.1| Transporter, drug/metabolite exporter [Bacillus cereus MM3]
Length = 294
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 97/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKITEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T++ + + S TP V ++ L
Sbjct: 62 KT-VTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRMLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWEFQSNPIEHMNLYVVLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + ++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNINFFIGGILIICSVLITTFEK 293
>gi|331270199|ref|YP_004396691.1| integral membrane protein [Clostridium botulinum BKT015925]
gi|329126749|gb|AEB76694.1| Integral membrane protein, putative [Clostridium botulinum
BKT015925]
Length = 297
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 102/288 (35%), Gaps = 13/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G ++ + +G P++ + V++ R L + +F +
Sbjct: 1 MKRIHGIIYALLSSTAFGFMPIFAKIAYNHGSNCFTVLTFRFLIAALLLFIYFLIKKISF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + LK G L +++T + + + L + +FV P + + +
Sbjct: 61 KVNRQQLKLLFLTGSLGYTSTGIGL-----FLSYKYISVGLATTMHFVYPAAVILMSYLI 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
KE +IIA +L + + ++ G + L +T++A A +
Sbjct: 116 YKEGFTKNKIIALILSLAGVCVLAGEKGQCISPLGAFLAILSGLTYAACIIAMNKEELKK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + ++++ S + L + +F +K
Sbjct: 176 LNNTIVVFYFSLFSGIAMLIFSLISKSLILNFNFYITSSVLGISIISTITSTILFIKALK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S+ I+ P++ I+ + + ++ + T + +++ ++++
Sbjct: 236 IIGASSTSILATCEPIVSIIMGILLFREQLTTSLVMGTILILFSVIIL 283
>gi|169795456|ref|YP_001713249.1| hypothetical protein ABAYE1332 [Acinetobacter baumannii AYE]
gi|301344819|ref|ZP_07225560.1| hypothetical protein AbauAB0_01220 [Acinetobacter baumannii AB056]
gi|332855225|ref|ZP_08435776.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332871996|ref|ZP_08440383.1| putative membrane protein [Acinetobacter baumannii 6013113]
gi|169148383|emb|CAM86248.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
gi|332727602|gb|EGJ59024.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332731029|gb|EGJ62332.1| putative membrane protein [Acinetobacter baumannii 6013113]
Length = 300
Score = 79.6 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/286 (15%), Positives = 100/286 (34%), Gaps = 9/286 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ L +GTL + A +L G L+ S ++ R L S + ++
Sbjct: 6 DDHHLKRKVGTLEMVVAMLLSGSIGLFV-IKSGQSPFNIVFFRCLISALCLIPICYFYGH 64
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K K + ++V S ++ +W A L + Y V P + FLG+
Sbjct: 65 ----FKKVYFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVISFLGA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ E+LN ++ ++ + L+++ + S +
Sbjct: 121 LVFHEKLNKNDVLWTIVAFIGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITKK 180
Query: 197 FIEMCVLAIPALF----YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L I + +V F + L +F++ + IK
Sbjct: 181 LSNTPPLLIVFIQTLSGAIVMAPFMSVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ L+ + I+ + P+ IV F + + + + G++++ ++
Sbjct: 241 KIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVL 286
Score = 36.0 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 7/146 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
GL + + ++G V A L+ I+ L T+ L L ++ + L + +
Sbjct: 147 GLGSASVNSNELVGLGLVLIATTLYSISVLITKKLSNTPPLLIVFIQTLSGAIVMAPFM- 205
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S+ ++ + + ++ A + A+ + F+ P+ ++
Sbjct: 206 ------SVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIKKIPLNNIAILSFIYPISTI 259
Query: 133 FLGSVFLKERLNHLQIIAALLIILSL 158
+ F L Q++ A LI+L +
Sbjct: 260 VIDYFFFDHVLTSTQVLGAGLILLGV 285
>gi|330448164|ref|ZP_08311812.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492355|dbj|GAA06309.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 301
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 96/297 (32%), Gaps = 16/297 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G F+ + + + + +++ + V E+++ R SL + I K
Sbjct: 11 LGARFMLLSALGFALMSSTVKYVSQLGIPVFEIVAARAFVSLIISYLDI--------KRK 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L+ + + YA+ T + ++ PV + L +FLKER
Sbjct: 63 GISVWGNNKPLLIVRGLVGTIGLSCVYYAVTTLPLAEATILQYINPVFTAILAVIFLKER 122
Query: 143 LNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ +I +L IL L + + + A+ A I V
Sbjct: 123 VQFSTLICIVLSILGLFFIVNPTTINSGGSHLPMFSVMIAVIGAFVSAISYIIVKKLSNT 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L + + + F + ++ T LI G+ + ++
Sbjct: 183 EDSSVIIFYFPLITLPLSILVVSQDFVMPDLTTTFLLILVGIFTQVGQLGLTKAMQTQSA 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
Y +L ++ + + I G+++ +V L I +
Sbjct: 243 GKATAYSYVQIVLSVIFGFIVFNEVPSIWTYIGGGLIIAGALVNLFGHNIMQSIKRK 299
>gi|147920872|ref|YP_685321.1| hypothetical protein RCIX589 [uncultured methanogenic archaeon
RC-I]
gi|110620717|emb|CAJ35995.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 308
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/274 (10%), Positives = 89/274 (32%), Gaps = 12/274 (4%)
Query: 35 ILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
WG + + + Q+ +E+++ R + P + A + + G + +
Sbjct: 26 AFWGASGVAIKEAYLQLGTMEILALRFAIATPLLIGATLLWKGRKAFNVEL---KDIPYF 82
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
+ + + + + +L + + ++ +FL + + E+L + ++I A +
Sbjct: 83 AALATIGVTLSFFLQVLSLDYTTATNFTLIFNLSTFFIIFLSAWLMGEKLTNNKLIGAFV 142
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV--------GSSEGFFIEMCVLAI 205
L ++ + L + + I S + +
Sbjct: 143 AFAGLALIVTNGNFSLSPNILGDGIALMGTLAWAIYTVLGKRANEKYSALTVLNYVFIFG 202
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
++ + + F +++YG+++ ST+ + Y
Sbjct: 203 TLELIPLYFLSPHTPVTAFTGLTWLSMGFLAICCSLIAFLVYNYGLEKLPASTIAVFIYI 262
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
PL ++ + +L + + +++ M
Sbjct: 263 MPLSGVLLAAIVLGEAMTAYTLAGAALIIFGMFF 296
>gi|320354850|ref|YP_004196189.1| hypothetical protein Despr_2764 [Desulfobulbus propionicus DSM
2032]
gi|320123352|gb|ADW18898.1| protein of unknown function DUF6 transmembrane [Desulfobulbus
propionicus DSM 2032]
Length = 300
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 94/288 (32%), Gaps = 16/288 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M+ + + A +LWG + + ++ +++ L VI R++ + S
Sbjct: 6 QRMLPIMALLSAMVLWGSSFVALKYSFQEMHPLAVILGRMVVASLCFLPF------YRSF 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ V + ++ F AL+ S + P++ + L
Sbjct: 60 ARAGLRRHHMVPLACMCLCEPCCYFLFESLALVYTSASQASMITTMLPLMVALAAGLMLG 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVG 191
ER+ I L L ++L + +A+ +
Sbjct: 120 ERITRRTIGGFFLAAAGALWLSLGGEGTDQAPHPALGNFLEFMAMVCATGYTILMKRLSK 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
FF+ A+F+ + L L +++ + ++++G+
Sbjct: 180 ELHPFFLTGIQAFTGAVFFAPVLLLPSVQASALSIGGIGAVLYLGIVVSVGAYGLYNFGV 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
R S P+ I+ +L + ++ + + +V ++V
Sbjct: 240 SRIPASQASAFVNLIPVFSILFGFLLLGERLNFWQWMACTLVFTGVLV 287
>gi|310658922|ref|YP_003936643.1| membrane spanning protein [Clostridium sticklandii DSM 519]
gi|308825700|emb|CBH21738.1| putative Membrane spanning protein [Clostridium sticklandii]
Length = 295
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 98/296 (33%), Gaps = 12/296 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G + + ++WGI+ + + V L + +R + + +F + Y +
Sbjct: 1 MNKSKAIGLILLIITVVMWGISFISIKISMDVFPPLSLAFYRFVIASIILFPIMKYAAPK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
LLK M + +++ F +L S PV++ F
Sbjct: 61 EKLLK-----KDIPLMATAGIIGITIYFFFENNGILRISASAASVIIAFMPVVAAFGEIF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
FLK+ + A L IL + ++ S + L + A +
Sbjct: 116 FLKKIPKLTALFAVALSILGVYLVIGGDLSSGGSLLGYLYMLGAAISFSIYLIITKPLFD 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + L ++ + GF L F+ + + + +
Sbjct: 176 TYSDVTVSFYQSLFGCLAFIPFLGFEKVNWSQLNPEISMHFIFLAVFCSGIATYFYMFAL 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + P++ + S F ++ +++ + IV+I++ + L
Sbjct: 236 NNLGVTISAVFMNLIPVVTFIVSYFWYEEIPSSIQLLGAAIVIISVSIVTLSEKNK 291
>gi|254672801|emb|CBA06914.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|319411030|emb|CBY91429.1| Uncharacterized transporter yoaV [Neisseria meningitidis WUE 2594]
Length = 345
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 86/283 (30%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 62 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 114
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 115 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 174
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 175 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 234
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + + +++ G+ R
Sbjct: 235 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGVGCSWYAYWLWNKGMSRVPA 294
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 295 NVSGLLISLEPVVGVLLAVLILGEHLSPVSVLGVFVVIAATLV 337
Score = 37.2 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 30/130 (23%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+ + + G + V + + +
Sbjct: 62 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHVGKIPREEWKP 121
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
LI + + G+K ++ ++ PLLM+ F I
Sbjct: 122 LLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARAYHWICGA 181
Query: 292 IVVIAMVVYL 301
+ + +
Sbjct: 182 AAFAGVALLM 191
>gi|239907736|ref|YP_002954477.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
gi|239797602|dbj|BAH76591.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
Length = 296
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 83/293 (28%), Gaps = 17/293 (5%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + +LWG T + + L + R + ++F G L
Sbjct: 8 LVGSAVLWGGTWVAGRVLATYMGPFSAAFLRFALASVFLYFLTARMEGKFPRL----ARR 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+L +AT + + F L T + P + V +ER L+I
Sbjct: 64 DLPWLLTLAATGIFAYNALFFAGLRTVPAGRAALIVACIPSVVALFSGVLFRERFTKLKI 123
Query: 149 IAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + G + +A + +K +
Sbjct: 124 AGIATSFAGVGCIVSGGDPASLLAKGLSTGDLCIFGCVAAWAAYTLAGKKAMERVGPYSA 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
C+L L + G + L + F + G+K
Sbjct: 184 VAWSCILGAAMLLPPALASGLWRDVAVAGPVAWGCVAFFGILATGYGFSWYYEGVKAIGP 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ G+ P++ +V +L +P+ + +V+ + + + +
Sbjct: 244 TKAGVFINLVPVVAVVLGHALLDEPLSPALAVGGALVLAGVWLTNRHPALANR 296
>gi|163745230|ref|ZP_02152590.1| membrane protein [Oceanibulbus indolifex HEL-45]
gi|161382048|gb|EDQ06457.1| membrane protein [Oceanibulbus indolifex HEL-45]
Length = 312
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/311 (12%), Positives = 100/311 (32%), Gaps = 13/311 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ ++ S +G A +L+ + L V E + R +++P + +
Sbjct: 1 MKVDDFSARPALGVGLKITAILLFTCMSAIIKSLADDVPAGESVFFRSFFAIPVILIWLA 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S LK V+ G L + F TP+ +V
Sbjct: 61 QRGKLKSGLKTKNA-----MGHVWRGLFGTTAMGLTFTGLGLLPLPEVTAIGFATPIFTV 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFAR 185
L +V L E++ +++ A + ++ ++I+ + ++ + + + +
Sbjct: 116 ILAAVLLGEQIRLIRVTAVAIGLVGVMIILWPRFSNIGTMEQTATIGALLILMATMVRSL 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I + ++ + + + + L ++ L+ GL+
Sbjct: 176 VQIHIRQLVQNEDTAAIVFYFSCTASLLALCTLPFGWVLPDLQTFGLLVLAGLIGGVAQI 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + S + +YT+ L IV + + +V+ A + +
Sbjct: 236 LITSAYRFGSASMLAPYDYTSMLFAIVLGYVFFAELPTMMMLAGAALVISAGALVIWRER 295
Query: 306 INSGKNKTKKS 316
+ +S
Sbjct: 296 QLGMERGKARS 306
>gi|15890958|ref|NP_356630.1| hypothetical protein Atu4011 [Agrobacterium tumefaciens str. C58]
gi|15159274|gb|AAK89415.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 294
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 89/292 (30%), Gaps = 3/292 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L+ A+ ++ ++ L ++ W+ + S G
Sbjct: 3 SAKTGFLYALVAFTIFAAQDGISKHLGSAYPPVFVAMLRYWAFAVFVLLMAARSAGGIRG 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P + + +LAV F I++ + P+I L L E
Sbjct: 63 AVMANRPW---LQISRGVLLAVQIVFSIFSFAVVGLAHSHSILASAPLIVAALSMPLLGE 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + A + + +L++ G + I +A+ A ++ M
Sbjct: 120 HVGWRRWCAIFVGFIGVLVILKPDGDGFDNKLIITFVAAFMLALYSVLTRLGSKSDSAMT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ G ++ D +++ + + A ++V
Sbjct: 180 SFFYTGVAGAAALTLVGPFYWVPLAPQDWGWMLALCITGMSGHYCLIKAFELADAASVQP 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
Y +L+ + V I + + + IV+ A + + + + +N+
Sbjct: 240 FSYYQLVLVSIIGVTIYGEVVTSNMVTGAAIVIAAGLFTIWREHVVARRNRR 291
>gi|284040068|ref|YP_003389998.1| hypothetical protein Slin_5227 [Spirosoma linguale DSM 74]
gi|283819361|gb|ADB41199.1| protein of unknown function DUF6 transmembrane [Spirosoma linguale
DSM 74]
Length = 313
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 14/314 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFA 70
++ E++ +G FVF A + + + Q + +++ R+L++LP
Sbjct: 2 SMAVESSRARYWLGAFFVFMAAFCFACKGILIKLAYQYPIDAISLLTLRMLFALPFYVLI 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
++ ++ T K ++ ML + A + L+ L F+ P
Sbjct: 62 LLNLVRTQPPVQLTRKQWVSLLMLGITGYYFASFF--NFLGLVYITASLERILLFIYPTF 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA---------- 180
+ + ++ K + LQ+++ L +L+ + I
Sbjct: 120 VLLINALSFKRPITRLQLLSMGLTYSGILLAFWGNIETAHQKDIIQGAFWVILSGLVYAI 179
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
Y + F ++A A + G L L +
Sbjct: 180 YLVGSDDMIARIGSQRFTCYAMIAATAPVLIHCIIQHGMHLTSYPKPVYVLGLGMGIFVT 239
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + GIKR I+ P+ I+ S IL + I + + V+ + +
Sbjct: 240 VVPTFMIAEGIKRIGSGNASIIASVGPIFTIILSTIILGEMISIGQIVGTFFVLAGVFLI 299
Query: 301 LLPTVINSGKNKTK 314
I G N+
Sbjct: 300 SWHGKIQFGNNRQN 313
>gi|189460784|ref|ZP_03009569.1| hypothetical protein BACCOP_01431 [Bacteroides coprocola DSM 17136]
gi|189432503|gb|EDV01488.1| hypothetical protein BACCOP_01431 [Bacteroides coprocola DSM 17136]
Length = 302
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 96/300 (32%), Gaps = 15/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T G ++ A +G+ PL+T + + VS V+ +R + + +
Sbjct: 1 MASNTFKGFVYGAVAAASYGLNPLFTLPLYADGVSADSVLFYRYGLGVVMLALLMKVQKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L + + + + A + + S FV PV+ + +
Sbjct: 61 SFALHRSEVLPLLVM------GMLFAFSSLALFQSYNYMDAGIASTILFVYPVLVAVIMA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIP 189
VF KE+++ + ++ L + + ++ G LL ++T++ Y
Sbjct: 115 VFFKEKVSVITAVSIALAFVGISLLYKGEGGKTLSLIGVLLVFISSLTYAIYIIGVNRSS 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L +VV F + +
Sbjct: 175 LKDMPTAKLTFYALLFGLSVFVVRLKFCTHLDPISTPWLWINPIGLALFPTVISLVAMTK 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I + I+ P+ + V + + + + +V+ A+ + ++ + +
Sbjct: 235 SIHYIGSTPAAILGALEPITALFFGVLVFGERLTPRIILGIILVLSAVTLIIVGKSLVNR 294
>gi|150005751|ref|YP_001300495.1| putative integral membrane protein [Bacteroides vulgatus ATCC 8482]
gi|254882070|ref|ZP_05254780.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294777231|ref|ZP_06742687.1| putative membrane protein [Bacteroides vulgatus PC510]
gi|319640922|ref|ZP_07995631.1| integral membrane protein [Bacteroides sp. 3_1_40A]
gi|149934175|gb|ABR40873.1| putative integral membrane protein [Bacteroides vulgatus ATCC 8482]
gi|254834863|gb|EET15172.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294448945|gb|EFG17489.1| putative membrane protein [Bacteroides vulgatus PC510]
gi|317387441|gb|EFV68311.1| integral membrane protein [Bacteroides sp. 3_1_40A]
Length = 304
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 94/300 (31%), Gaps = 15/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G L A +G+ PL+T L +SV V+ +R ++ + +
Sbjct: 1 MTNNKTKGFLLGAIAAASYGMNPLFTLPLYSAGMSVDSVLFYRYALAIVVLGIMMKMQKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++ K + + + + F + + S FV PV+ + +
Sbjct: 61 SFAIKKADVLPLCIM------GLLFSFSSLFLFMSYNYMDAGIASTILFVYPVLVAIIMA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIP 189
V KE+++ + + + L + + ++ G +++++ Y
Sbjct: 115 VVFKEKVSPVTMFSIALAFVGISLLCKSPGGQTLSLVGITFVFLSSLSYAIYIVGVNRSS 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + VL YVV F G + + +
Sbjct: 175 LKDMPIAKLTFYVLLFGLSVYVVRLKFCTGLQPIPTPLLWVNAVSLAVFPTVISLVTMTK 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I + I+ P+ + V I + + + +V+ A+ + + +
Sbjct: 235 AIHYIGSTPTAILGALEPVTALFFGVLIFGEQLTPRIILGILMVITAVTLIIGGKTLLKK 294
>gi|149908728|ref|ZP_01897389.1| hypothetical protein PE36_21049 [Moritella sp. PE36]
gi|149808270|gb|EDM68209.1| hypothetical protein PE36_21049 [Moritella sp. PE36]
Length = 324
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 102/293 (34%), Gaps = 12/293 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L F A L+ ++ + + + ++++R+L SLP V+
Sbjct: 33 HKIGLLCAFFATCLFSTKGIFIKLAYQYGIDSITLMTYRMLLSLPFYIAVFVWMIRKKPA 92
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK +K + V ++ + F + L L F P + V L + L
Sbjct: 93 LKSPIKE-QFVPVMGIGLLGYYLSSYFDLQGLNHISSQLERLLLFTYPTVVVILSWLVLG 151
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVG 191
R+N I A +L + ++ H LL L T++ Y KT
Sbjct: 152 NRINRQVIGALILAYAGVFVLFYHDLGKQGEGVITGSLLVLTACFTFACYLLFSKTKIQK 211
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + + + + ++ ++ + + L + S I
Sbjct: 212 LGSLIFTCIAMFSASLMIFLHFSIVHDVADLSIPMPVFWISLWLAIGCTVIPSFLMSEAI 271
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
R I+ + P+L + +VF+L + + +V++A+V +
Sbjct: 272 ARVGPEQASIVGGSGPVLTALMAVFLLGEAFTLFHFLGMSMVIVAIVWLSVRK 324
>gi|320536561|ref|ZP_08036584.1| integral membrane protein DUF6 [Treponema phagedenis F0421]
gi|320146574|gb|EFW38167.1| integral membrane protein DUF6 [Treponema phagedenis F0421]
Length = 294
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 104/295 (35%), Gaps = 3/295 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAI 71
++K+ S G + + + ++G P+ + ++ S +I R LP ++ +
Sbjct: 1 MNKQFLSQKA-KGVIAILLSAFIFGCMPILAKKFYIHGGSASTLIFLRFFLVLPFLYIVL 59
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
L++ L + +L + ++ + + ++ + V V
Sbjct: 60 RTQKIPLAISAKELFHLITASILGYCISVFLLFISYDYISVGLATAVHFIYPSLVVLVCI 119
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+F ++ + + + + L++ VT++ Y P+
Sbjct: 120 IFFKEKASLIKIAAVLMATTGVFLCGKSGEIASFFGLLIAFLSGVTFAVYVIYIDKSPLR 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + I A+ + ++G G + L L+++ +F YGI
Sbjct: 180 KMNAIKLTFYLCVISAVIMLGYSGIRKELSLEFGIPAWSYALTLSILVSAGAVNLFQYGI 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
K I+ P+ I+ V IL + +D + ++++A+ + L
Sbjct: 240 KIIGAQNTSILSTIEPITGILLGVAILHEKLDILSISGACLILLAVFLIALGPRK 294
>gi|224584776|ref|YP_002638574.1| hypothetical protein SPC_3045 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224469303|gb|ACN47133.1| hypothetical protein SPC_3045 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 304
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + A+ + + D
Sbjct: 6 RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIP-LLLAVRFLFRQRTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 VWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA I L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGICGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDSGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|300704668|ref|YP_003746271.1| hypothetical protein RCFBP_20478 [Ralstonia solanacearum CFBP2957]
gi|299072332|emb|CBJ43666.1| conserved membrane protein of unknown functionDUF6, transmembrane
[Ralstonia solanacearum CFBP2957]
Length = 312
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 90/292 (30%), Gaps = 14/292 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G L + + +G ++T + + + +++ R + + + G+
Sbjct: 17 KLLGVLLIGVSAASFGAMAIFTHYAYASGANTVGLLTVRFCLAALALMAVMRVRRIGIPP 76
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G+ A F AL L + ++ P+ L +VFL+
Sbjct: 77 WSR------VAGLAAMGGIGYAGQSFAFFTALHYAPASLVALLLYLYPMFVTVLAAVFLQ 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVGSSE 194
ERL ++A +L + +G+ S A + +
Sbjct: 131 ERLTPAALVALVLCSAGAGLTVGGAGLAGGSPLGVVLGVAAAVIYSVYITVGARVTRGVD 190
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ YV F L GL F G++R
Sbjct: 191 PIACTTVICTAAAVVYVGLAAAGVPARFPGSVAGWAASLAIAGLSTVIAILAFFAGLQRL 250
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ P++ +V + +L + I + +++ ++
Sbjct: 251 GAAQASMLSTLEPVVTVVLAALLLGESIGATQMAGGALILAGVLWLTRADAR 302
>gi|256842075|ref|ZP_05547580.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298377351|ref|ZP_06987304.1| integral membrane protein DUF6 [Bacteroides sp. 3_1_19]
gi|256736391|gb|EEU49720.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298265765|gb|EFI07425.1| integral membrane protein DUF6 [Bacteroides sp. 3_1_19]
Length = 321
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/314 (14%), Positives = 101/314 (32%), Gaps = 22/314 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G L + A IL+ I +++L E V + S R+ ++ + ++
Sbjct: 2 MNQEKLKGHLLILAANILFAINMPVSKYLLPEHVQPEALTSMRMSFACVMFWITSLFVPY 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LKD + + + + ++ G FI+ L T S P+ + L +
Sbjct: 62 EKVPLKD------LGLLCLCALCGVGLNQGLFIWGLNTTSPVDASIIATAVPIFVMILAA 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ LKE + ++ LL I + + L S G S +I + S+
Sbjct: 116 LILKEPITRMKTFGVLLGICGAISLILQSTQGSNQASSLGGNLLITVSGFMYSIYLVVSK 175
Query: 195 GFFIEMCVLAIPALFYVV------------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
++ + + ++
Sbjct: 176 PLTLKYSSVTMMKWMFLFSTLITLPFAIESIWNTPAFHKEVFDGQELGAIFFVLFGATFV 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + +KR + +TV + Y P++ +V I + + + +V + +
Sbjct: 236 PYLLIPLALKRIRPTTVSMYNYIQPIVASFIAVCIGQDSFSVTKLVSAALVFSGVYLVTQ 295
Query: 303 PTVINSGKNKTKKS 316
+ + +S
Sbjct: 296 SKSRADLEQQNSQS 309
>gi|146306334|ref|YP_001186799.1| transporter DMT superfamily protein [Pseudomonas mendocina ymp]
gi|145574535|gb|ABP84067.1| RarD protein, DMT superfamily transporter [Pseudomonas mendocina
ymp]
Length = 297
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 66/295 (22%), Positives = 127/295 (43%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G A +L+ + P Y Q L + +++ + RVLWS+P V + G
Sbjct: 6 RGVALSVGASVLFALLPGYVQLLAPLDGIQIFAQRVLWSIPLVLLLVFLTRQGALLRETF 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P V +A ++ V WG F++A L + S YF+ P+ V G +F E
Sbjct: 66 ARLRREPLLVAAWPVAAVLIGVQWGLFLWAPLAGRMLEVSMGYFLLPLAMVLAGRLFYNE 125
Query: 142 RLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL LQ +A ++ +L L+L A+ + Y R+ + + + GF +EM
Sbjct: 126 RLRPLQQLAVACAMVGVLHELWRTQAFSWLTLVTALGYPPYFMLRRWMRLDALSGFVLEM 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+LA A++ +V G +G L + G L+ + F + + G
Sbjct: 186 LMLAPLAIWLIVAYGPAGAFEGR---AALWLLVPGMALIGTLAFAAMMASSRLLPMGLFG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ Y P+L+ ++ +L + D + + + + +A+++ + K + ++
Sbjct: 243 ILSYVEPVLLFAVALMVLGESFDAGQWLTYLPIWLAVLLVGWDSARLLRKQQLER 297
>gi|110799419|ref|YP_694593.1| hypothetical protein CPF_0129 [Clostridium perfringens ATCC 13124]
gi|168213375|ref|ZP_02639000.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
gi|168217904|ref|ZP_02643529.1| putative membrane protein [Clostridium perfringens NCTC 8239]
gi|110674066|gb|ABG83053.1| putative membrane protein [Clostridium perfringens ATCC 13124]
gi|170715185|gb|EDT27367.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
gi|182380058|gb|EDT77537.1| putative membrane protein [Clostridium perfringens NCTC 8239]
Length = 297
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 6/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A + L ++ V+ + + + V F I Y G
Sbjct: 2 NSKFKGIIFMILASAAFATMNLLSKLAVGVNSYQKTFLTNVVATLIVCFIIAYKKGSFFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K++ K + YAL + + P ++ + +
Sbjct: 62 KKESRKYLLVR------GVTGTLSILTNYYALDKMFLSDATILTKLAPFFTIIFSYLLIS 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q ++ L + + ++ SA +
Sbjct: 116 EKITKKQFTLLIVAFAGSLFVIKPQFSTAIIPSLIGVASAAFAGIAYTMIRVIGDKEDFW 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + S + + + L L+ G+ + + K A S +
Sbjct: 176 TIILSFTSIATIVMLPSMFMNTDNLTLQNILLLVSAGIAFTLGQVALTIAYKNAPASEIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +Y ++ + K+ D + + I+V + ++ +L S K
Sbjct: 236 MYDYIGLIIAAIYGFMFFKEIPDFLSFTGYIIIVGSSLLNILGNKKTSNKE 286
>gi|229197487|ref|ZP_04324214.1| Transporter, drug/metabolite exporter [Bacillus cereus m1293]
gi|228586111|gb|EEK44202.1| Transporter, drug/metabolite exporter [Bacillus cereus m1293]
Length = 294
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T++ + + S TP V ++ L
Sbjct: 62 KT-VTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWEFQSNPIEHMNLYVVLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVFITTFEK 293
>gi|296386724|ref|ZP_06876223.1| hypothetical protein PaerPAb_01270 [Pseudomonas aeruginosa PAb1]
Length = 292
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 93/296 (31%), Gaps = 5/296 (1%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA 70
+ S AS T+ G L + A L+ ++FL + ++ + A
Sbjct: 2 NASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPIVMVVWARYLVHTLLMVA 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ GL++++ + L T L G L + F+ P++
Sbjct: 62 VFVPRNGLAVIRTRRPLMQLARALCLIGTSLFFTTG-----LRYLPLAEATAVNFLAPLL 116
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L LKE+++ Q +A L + +L + G A+ SA CF +
Sbjct: 117 VTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLT 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ +F + + ++ L +I G + +
Sbjct: 177 RMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQA 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A +T+ Y + + + + D + ++ + +V
Sbjct: 237 FRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWSLLGILVICASGLVVAWRRGR 292
>gi|77361397|ref|YP_340972.1| permease [Pseudoalteromonas haloplanktis TAC125]
gi|76876308|emb|CAI87530.1| putative permease [Pseudoalteromonas haloplanktis TAC125]
Length = 288
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 106/287 (36%), Gaps = 9/287 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+++ A +L+G T L+ + + ++ L++ +R + +F + + L
Sbjct: 8 LIYLHIAVLLFGGTALFAKLI-GLNALDITVYRAAIAGIAIFILLGMQKKPIKL-----N 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K + + + +HW + + + ++F PVI+VFL F K +
Sbjct: 62 QGKDYLIALLLGVAVGIHWVTYFAGMQLAGITIGMLAFFSYPVITVFLEPFFHKSKPKAK 121
Query: 147 QIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
II+A ++++ + ++ + L + V + + R I + +
Sbjct: 122 DIISAAVVLIGIYLLIPNANLGNDVTLGVITGVISAFFFAIRNIIHKRYFNQYGGPQTMF 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ F + N L L+ + + +F+ +K +T G++
Sbjct: 182 YQTLVASLMLCAFIEVPIYATTNHDLVLILVAGVIFTAAPHSLFAASLKHLSAATAGLIA 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
PL + ++ IL + I ++V A S +
Sbjct: 242 CLQPLYGTLLAIIILHERPSIATFIGGALIVSAACFETWSIARKSRQ 288
>gi|324327295|gb|ADY22555.1| transporter, EamA family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 294
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKITEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T++ + + S TP V ++ L
Sbjct: 62 KI-VTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSNPIEHMTLYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIIGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|313112187|ref|ZP_07797965.1| hypothetical protein PA39016_004160005 [Pseudomonas aeruginosa
39016]
gi|310884467|gb|EFQ43061.1| hypothetical protein PA39016_004160005 [Pseudomonas aeruginosa
39016]
Length = 292
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 93/296 (31%), Gaps = 5/296 (1%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA 70
+ S AS T+ G L + A L+ ++FL + ++ + A
Sbjct: 2 NASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPIVMVVWARYLVHTLLMVA 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ GL++++ + L T L G L + F+ P++
Sbjct: 62 VFVPRNGLAVIRSRRPLMQLARALCLIGTSLFFTTG-----LRYLPLAEATAVNFLAPLL 116
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L LKE+++ Q +A L + +L + G A+ SA CF +
Sbjct: 117 VTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLT 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ +F + + ++ L +I G + +
Sbjct: 177 RMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQA 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A +T+ Y + + + + D + ++ + +V
Sbjct: 237 FRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWSLLGILVICASGLVVAWRRGR 292
>gi|167840440|ref|ZP_02467124.1| hypothetical protein Bpse38_27444 [Burkholderia thailandensis
MSMB43]
Length = 323
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/295 (9%), Positives = 72/295 (24%), Gaps = 6/295 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + L + A +WG + + L + R L + +
Sbjct: 21 ARKHLRANLLMLTAAAIWGSAFVAQRLSLAVIGPFLFTGLRFLLGAAVLVPLLRLNGAAR 80
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ ++ + + +LAV L + F + V+ +G F
Sbjct: 81 AHCAAVARDRTLLLPGLALGGLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPIIGVFF 140
Query: 139 LKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ALL + L ++ A V +
Sbjct: 141 RHRT-GAGTWLGALLAAIGLYFLSVDEHFSMLYGDWFQLAGAIVIAVHVIAVGHLVRRHD 199
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + L G L + + + A
Sbjct: 200 PLALSFMQFVVCGALCLALGLATEPLDRATLVRALPTLLYGGLLSVGVGYTLQVVAQRDA 259
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + ++ L + + +++ ++V L
Sbjct: 260 APAHAAVIFSMEGVFAAIAGWAALGETLSLRALAGCALMLAGLLVCQLLPGHARR 314
>gi|319745584|gb|EFV97885.1| DMT superfamily drug/metabolite transporter [Streptococcus
agalactiae ATCC 13813]
Length = 308
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 104/300 (34%), Gaps = 10/300 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
GT+ A + WGI+ + Q+L V V + S R+L + + ++ L+
Sbjct: 10 KGTMMTLAAGLAWGISGISGQYLMSHGVHVNLLTSLRLLITGIFL-LSLARSKQKEHLVA 68
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +L+FS L ++ F+ A+ + ++ P++ + + + ++R
Sbjct: 69 AWKQPKFLKQVLLFSIFGLVLNQYAFLRAIHLTNAGTATVLQYMAPILILSIVCILNRQR 128
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+IIA + IL ++ H L + + + + + G
Sbjct: 129 PTSFEIIAIAMAILGTYMIATHGKLGSLAITPKGLMWGLGSAITYSIYILLPVKLIHEWG 188
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + + I ++ G+ F + F G+
Sbjct: 189 STIVIGSGMFIGGILFSLVTKAWQYPLQINVISILAYIGIIGIGTIFAYTFFLKGVSIVG 248
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ P+ + +V +L + + + + +A+ + +I K K K
Sbjct: 249 AVKGSLLASVEPVSSVFLTVLVLGEIFYPIDLLGMLFIFLAVTLISYKDLIALKKMKRVK 308
>gi|253681172|ref|ZP_04861975.1| transporter [Clostridium botulinum D str. 1873]
gi|253563021|gb|EES92467.1| transporter [Clostridium botulinum D str. 1873]
Length = 285
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/286 (15%), Positives = 103/286 (36%), Gaps = 6/286 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+++ + + + + ++ V+E + R L SL F A+ +G +
Sbjct: 2 NNKTKAVVYMLLSALGFAFMGAMVKLAGRLPVIEKVFFRNLISLFVAFGALKKVNGPIFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K A +L + L + Y++ ++ ++P +FLK
Sbjct: 62 KRKNQKYLLARALLGLTGMFL------YFYSIDNLVLADSAMLNKLSPFFITLFAIMFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L +++++ +++ + +++ + A+A SA V +
Sbjct: 116 EDLTGMKVVSMIIVFVGAILVIKPQWNLSIIPALAGFMSAAFAGGAYTIVRYLKDKETPS 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +L VV F + + L+LI G+ + +Y K A S V
Sbjct: 176 TIVFYFSLVSVVGALPFMLAKFVMPSKIQFLYLILTGVFAAIAQFSLTYSYKYAPASEVA 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I Y + + FI + D + + I+++ + L
Sbjct: 236 IYNYVNIVFSAIIGFFIWDEIPDRLSILGGVIILLMATLVYLYNRK 281
>gi|150398739|ref|YP_001329206.1| hypothetical protein Smed_3556 [Sinorhizobium medicae WSM419]
gi|150030254|gb|ABR62371.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 287
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 84/286 (29%), Gaps = 12/286 (4%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A +L G T + ++ + + + R + + P + + L
Sbjct: 1 MSLAMVLVGSTVIASKIIAADLPPFTATALRFVVAFPLFLLLMRARTTPWPRLT----RR 56
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ +L+ + + I L PV+S + V L ER +
Sbjct: 57 DWLLLLLQAGAGSVGYTTLLISGLKFTSAADAGVIIGTLPVVSAAIAIVVLGERPHPSLF 116
Query: 149 IAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
A L +L + SG + AV + +
Sbjct: 117 FAIGLAAAGVLAIVSKSGNAGPHSLSGGALIFGAVVCEGLFILLNKRLNTPIQPLALSSL 176
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + F + + F ++ G+ + + +
Sbjct: 177 MAGFGGAIAAPFALFEPAWVEAATVPAFAAVVYYALVPTVGGFLLWYAGLAKVSGTEASV 236
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
AP+ ++ + IL +P+ + + G V+IA++ LP
Sbjct: 237 FTALAPVSAVLLAYTILDEPLGLSQVLGIGCVLIAVLTLALPGARA 282
>gi|42782454|ref|NP_979701.1| integral membrane protein [Bacillus cereus ATCC 10987]
gi|42738380|gb|AAS42309.1| Integral membrane protein domain protein [Bacillus cereus ATCC
10987]
Length = 294
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFIVLYMILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KTVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSNPIEHMNLYVVLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I ++V ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIVCSVFITTFEK 293
>gi|319946782|ref|ZP_08021016.1| DMT superfamily drug/metabolite transporter [Streptococcus
australis ATCC 700641]
gi|319746830|gb|EFV99089.1| DMT superfamily drug/metabolite transporter [Streptococcus
australis ATCC 700641]
Length = 347
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 82/295 (27%), Gaps = 6/295 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +F F A + + I ++ L+ V + + L + G+ ++
Sbjct: 1 MEKNKLKAIMFAFLAAVFYAINVPISKVLLQHVGPTTMAALLYLGAGIGIGMMSLFNKKD 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + + F + + S V + + +
Sbjct: 61 REKAESLTKAELPYIVGMIVLD--IAAPIFLMLGISYGSSANASLLGNFEIVATTVIALI 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSE 194
KE + +A LI LS ++++ + + + S
Sbjct: 119 LFKEAVTKRLWVAIGLITLSSILLSFEGTDSFHFSYGSLLVIMATVCWGLENNCTRELSS 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ +L + F G + L + ++
Sbjct: 179 KSTYQIVMLKGLCSGLGALVISLIKKESFPGFGYIAIALALGFVAYGLSIFMYVRAQNVL 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ PL+ + + L + + + I ++VI + ++ T I
Sbjct: 239 GAAKTSAYYAVNPLIGALLAFVFLSESLSWMYVIALIVMVIGSALVVVDTFIRQH 293
Score = 37.6 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 57/171 (33%), Gaps = 6/171 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G+L V A + WG+ T+ L S +++ + L S G +
Sbjct: 155 GSLLVIMATVCWGLENNCTRELSSKSTYQIVMLKGLCSGLGALVISLIKKESFPGF---- 210
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
L + ++ A TS Y V P+I L VFL E L+
Sbjct: 211 --GYIAIALALGFVAYGLSIFMYVRAQNVLGAAKTSAYYAVNPLIGALLAFVFLSESLSW 268
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ +IA +++++ ++ + + I T++
Sbjct: 269 MYVIALIVMVIGSALVVVDTFIRQHDHEHQHTFTHSHGGSTHTHTVRHSHV 319
>gi|238019839|ref|ZP_04600265.1| hypothetical protein VEIDISOL_01715 [Veillonella dispar ATCC 17748]
gi|237863363|gb|EEP64653.1| hypothetical protein VEIDISOL_01715 [Veillonella dispar ATCC 17748]
Length = 313
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/300 (10%), Positives = 89/300 (29%), Gaps = 11/300 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G + WG++ Q+LE ++V ++ R+L + + + Y G+
Sbjct: 4 KQWIGMALAILGALFWGLSGTSVQYLEGAKHLNVEWLLEVRLLVAG-FLTIILAYMQDGM 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +L+F +A+ + A+ + + +V P + + +
Sbjct: 63 RIFDIFKNKKDFGKLLIFGVLGIALAQYTYFRAIAISGVGVATVLQYVAPTLIIIYLFLR 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVG 191
++ + + +L ++ + + G+ + + + S + + I +
Sbjct: 123 YFKKPSLAETGCVVLAMIGTVCIVSQDGLDMANINGEALLWGLISAASICVYTLQPIELL 182
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + L F + G+
Sbjct: 183 KKYGTTSIVGFAMFICGVISLAMFQQIDSEAIWDGMTWLGLFAIIILGTVVSFNAYIEGV 242
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+R I+ P+ + +L + I ++ + + +
Sbjct: 243 RRIGAVQGSILSSLEPISAALFGWALLGNEFTFIGIIGMICIIATVFIIAWDRQRQIKRE 302
>gi|169351201|ref|ZP_02868139.1| hypothetical protein CLOSPI_01980 [Clostridium spiroforme DSM 1552]
gi|169292263|gb|EDS74396.1| hypothetical protein CLOSPI_01980 [Clostridium spiroforme DSM 1552]
Length = 303
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 85/289 (29%), Gaps = 15/289 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N + G+L + A ++WG + + + ++ ++ ++ R + +
Sbjct: 4 NIVSDKLKGSLLLTLAAMIWGSSFIVMKSAVDFLTPNVLLFVRFSLATVIMVIMFYKHVK 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + T L + + L +F V I FL
Sbjct: 64 NTKLKDLK--------GGIVTGTCLFLAYLIQTIGLTMTTPGKNAFLTAVYCAIVPFLVW 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPV 190
+F +R ++ +AALL I + +++L G L + +K
Sbjct: 116 IFYHKRPDNYNFMAALLCIFGVGLVSLDGNLSMNLGDFLTLIGGIFYALHILAIKKYSQE 175
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ F+ + + + + G
Sbjct: 176 MHPIKLTTLQFAMTAILAFFGSLFFEDISLIKQIDSSIILQIGYLAFFATAVTLLCQNMG 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ + +V SV + + + F ++ +A+++
Sbjct: 236 QHLVSECNAAILLSLESVFGVVFSVLLYGEVLSFKVVTGFVLIFMALII 284
>gi|168210182|ref|ZP_02635807.1| putative membrane protein [Clostridium perfringens B str. ATCC
3626]
gi|170711696|gb|EDT23878.1| putative membrane protein [Clostridium perfringens B str. ATCC
3626]
Length = 297
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 6/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A + L ++ V+ + + + V F I Y G
Sbjct: 2 NSKFKGIIFMILASAAFATMNLLSKLAVGVNSYQKTFLTNVVATLIVCFIIAYKKGSFFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K++ K + YAL + + P ++ + +
Sbjct: 62 KKESRKYLLVR------GVTGTLSILTNYYALDKMFLSDATILTKLAPFFTIIFSYLLIS 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q ++ L + + ++ SA +
Sbjct: 116 EKITKKQFTLLIVAFAGSLFVIKPQFSTAIIPSLIGVASAAFAGIAYTMIRVIGDKEDFW 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + S + + + L L+ G+ + + K A S +
Sbjct: 176 TIILSFTSIATIVMLPSMFMNTDNLTLQNILLLVNAGIAFTLGQVALTIAYKNAPASEIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +Y ++ + K+ D + + I+V + ++ +L S K
Sbjct: 236 MYDYIGLIIAAIYGFMFFKEIPDFLSFTGYIIIVGSSILNILGNKKTSNKE 286
>gi|89894222|ref|YP_517709.1| hypothetical protein DSY1476 [Desulfitobacterium hafniense Y51]
gi|89333670|dbj|BAE83265.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 314
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 89/300 (29%), Gaps = 11/300 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAI 71
+N + GT+ I WG + Q+L + + V R+L + +F +
Sbjct: 12 KAQNIRTKAVRGTILTLIGGISWGFSGACGQYLFSVKGIDPHWVTVVRMLTAGLLLFCLV 71
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
++ + + K ++VFS L ++ A+ + ++ P++
Sbjct: 72 LFKYREQMVGLLSNK-RDRRTLIVFSIFGLIACQYTYLLAISHSNAGTATVLQYLGPLLI 130
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFA 184
+ + + +A L + ++ H L + +
Sbjct: 131 MIFVCGMDRRLPTKTEGVAIALAVTGTFLLATHGNVSNLVISAQGLFWGLMAALGLMLYT 190
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + G + + ++ L L + F
Sbjct: 191 IIPGKIINKWGSIVVTGCGMLMGGSILLVVIRPWQIPVSLDWQVFWGMLAIIVIGTVVSF 250
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ G+ ++ P+ + S F L + + F +++ +++
Sbjct: 251 TLYLQGVSDIGPVKASMIASVEPVSAALFSAFWLNTAFVWIDMVGFALIITTVILLTRQG 310
>gi|115357973|ref|YP_775111.1| hypothetical protein Bamb_3221 [Burkholderia ambifaria AMMD]
gi|115283261|gb|ABI88777.1| protein of unknown function DUF6, transmembrane [Burkholderia
ambifaria AMMD]
Length = 307
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/301 (10%), Positives = 82/301 (27%), Gaps = 6/301 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + L + A +WG + + L+ + R L + + +
Sbjct: 1 MKPEARKHLRANLLMLGAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGGLVLIPLLTFN 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L + P + + +LAV + L + F V+ V L
Sbjct: 61 TASRAQLAAIRREPALLVPGLALGALLAVSISLQQFGLQYTRIANAGFI-SSLYVVIVPL 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
VF++ R+ ALL + L ++ A
Sbjct: 120 IGVFVRHRIGAGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHFA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + L G L + +
Sbjct: 180 KRHDPLVLAFLQFVTCGALCLAAGLVIEPVSVAMLRSALPTLLYGGLLSVGVGYTLQVVA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A + ++ + ++ L + + + +++ ++ L ++ K
Sbjct: 240 QRDAAPAHAAVIFSMEGVFAAIAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARK 299
Query: 311 N 311
Sbjct: 300 K 300
>gi|326424202|ref|NP_762218.2| drug/metabolite transporter superfamily permease [Vibrio vulnificus
CMCP6]
gi|319999586|gb|AAO07208.2| Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus CMCP6]
Length = 298
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 93/304 (30%), Gaps = 16/304 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF 74
N +G ++ + + + + +++ + + E+++ R L SL + +
Sbjct: 3 SNLRSAFPLGVRYMILSALGFALMSASVKYVSVHGIPLFEIVAARALVSLIISYLDV--- 59
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
K L + + YA+ + +V PV + L
Sbjct: 60 -----KRKGISVWGNNKRWLFARGAVGTLALMCVYYAVTALPLAEATILQYVHPVFTALL 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTI 188
+FLKER+ + L +L + M S G + A+ + +
Sbjct: 115 AVLFLKERVQPATLACITLCLLGVFTMVYPSFDASGVGELPMLSVGIALLGAFGSSIAYV 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V ++ L + + G+ F + +I L LI G+ +
Sbjct: 175 IVRKLSRTEDSSVIIFYFPLVALPVSAMLIGDDFVVPDITLILILILVGIFTQIGQFGLT 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ Y + + V + + + ++V ++ +
Sbjct: 235 KAMQTQTAGNASAYSYVQIVFSALLGVVLFNEVPSIWTLLGGSLIVTGALINVFGPKSKW 294
Query: 309 GKNK 312
N+
Sbjct: 295 LANR 298
>gi|207743650|ref|YP_002260042.1| hypothetical protein RSIPO_01833 [Ralstonia solanacearum IPO1609]
gi|206595049|emb|CAQ61976.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 312
Score = 79.6 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 89/287 (31%), Gaps = 14/287 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G L + + +G ++T + + + +++ R + + + G+
Sbjct: 17 KLLGVLLIGVSAASFGAMAIFTHYAYASGANTVGLLAVRFCLAALALMVVMRVRRIGIPP 76
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G+ A F AL L + ++ P+ L +VFL
Sbjct: 77 WSR------VAGLAAMGGIGYAGQSFAFFTALHYAPASLVALLLYLYPMFVTVLAAVFLH 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVGSSE 194
ERL ++A +L + + +G+ S A + +
Sbjct: 131 ERLTPAALVALVLCSVGAGLTVGGAGLAGGSPLGVVLGVAAAVIYSVYITVGARVTRGVD 190
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ Y F L GL F G++R
Sbjct: 191 PIACTTVICTAAAVVYAGLAAAGVPARFPGSVAGWAASLAIAGLSTVIAILAFFAGLQRL 250
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ P++ +V + +L + I + +++ ++
Sbjct: 251 GAAQASMLSTLEPVVTVVLAALLLGESIGAAQMAGGALILAGVLWLT 297
>gi|226355057|ref|YP_002784797.1| hypothetical protein Deide_02340 [Deinococcus deserti VCD115]
gi|226317047|gb|ACO45043.1| Conserved hypothetical protein, precursor; putative membrane
protein [Deinococcus deserti VCD115]
Length = 299
Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 93/286 (32%), Gaps = 13/286 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +F + W + + LE + + +R L + + L D L
Sbjct: 9 LLAIFITIVFWASSFAGIRAGLEAFTPGHLTLYRFLVASLALGIYAAVARIPLPAWPDLL 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ S + ++ F Y ++ S PVI+ L + F ERLN
Sbjct: 69 RIGWL------SLFGITLYHVFLNYGQVSVPAGTASLIIAAGPVITALLATRFSGERLNR 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVGSSEGFFIE 199
L + L+ + + ++ L G + A+ +++ F + +
Sbjct: 123 LGWMGTLVSLSGVSLIVLGRGDSVEFTRGALLILAAALFTSVYFVFQKPLLRRMNPLHFT 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + L +++ G E + + + +++ + R
Sbjct: 183 VWSLILGTLPMLIFLPGFGDELARAPLDAHLAVIYIGLFPAALAYLTWTFALARVGAGVT 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y +P+L I+ + L + + + I V +++
Sbjct: 243 TSFLYVSPVLAILIAWLWLGELPTPLSVVGGLIAVAGVILVNTRGR 288
>gi|188588163|ref|YP_001921005.1| putative integral membrane protein [Clostridium botulinum E3 str.
Alaska E43]
gi|188498444|gb|ACD51580.1| putative integral membrane protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 290
Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 102/292 (34%), Gaps = 13/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T G + + + +G+ P++ + VI R L S +F ++Y +
Sbjct: 1 MNTYKGISYAILSSVAFGLMPIFASIAYENGSNPTTVIIFRFLLSSISLFIYLLYKKVKI 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +L V + L + +F+ P I +G VF
Sbjct: 61 KIERKPML-----ILLGIGIIAYTVTTQTLFISYNYLGAGLATTLHFIYPAIVCIIGFVF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
LKE+++ ++I+ LL + + + L ++ I V ++ + S
Sbjct: 116 LKEKISKRKLISLLLSGIGVYSLVAFESKSLSAIGIFLALFSGVAYAINLIILGLDCIKS 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + L + + F+ ++ + + I+
Sbjct: 176 IDNKISTLYMCVGATLGMITYGLFTKSIVLTFNTKMVASYIGISLISTIVSIILLLKAIE 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S+ I+ P++ I+ V IL + + I +++ A +V T
Sbjct: 236 LIGTSSTSILGTFEPIISIIFGVLILGENLSFELVIGAALILTATIVLAKDT 287
>gi|94971512|ref|YP_593560.1| DMT family permease [Candidatus Koribacter versatilis Ellin345]
gi|94553562|gb|ABF43486.1| Putative 10 TMS drug/metabolite exporter, DME family, DMT
superfamily [Candidatus Koribacter versatilis Ellin345]
Length = 304
Score = 79.6 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 98/288 (34%), Gaps = 18/288 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + WG L+ + LEQ+SV E ++ R ++ G+ I
Sbjct: 21 LAITALVLSGCCWGTGFLFGKIALEQMSVTENVAWRFIFGSLGLLPIIFLR-------WQ 73
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
V +L+ S + + + L S P++ +FL ERL
Sbjct: 74 PYTRRDWVSLLIASFVGVPIQFLIQFKGLQLTTVSHASLMIGTLPIMLAMSSVIFLGERL 133
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSS 193
+ + + + +++ L G + S +++ + +G
Sbjct: 134 HWQEWFSLAIATFGAVLIALSHGNGVGSPQASVVGDVLVVLSLLAAVVMVMITKKLIGRH 193
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + ++ + L + W + F + S + ++++G+ +
Sbjct: 194 DSLHVTSMMIVLGTLMLIPWAVLTHPMRFDFSTSTWIGVAAQGFIATSGAYLLWNWGLAK 253
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S G+ PL+ + V +L + + + +VV A + +
Sbjct: 254 VPASRAGVFLNMEPLVGALLGVTVLHEHLGWPALLGGAMVVGAAIHFS 301
>gi|182624832|ref|ZP_02952612.1| integral membrane protein DUF6 domain protein [Clostridium
perfringens D str. JGS1721]
gi|177910042|gb|EDT72444.1| integral membrane protein DUF6 domain protein [Clostridium
perfringens D str. JGS1721]
Length = 297
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 6/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A + L ++ V+ + + + V F I Y G
Sbjct: 2 NSKFKGIIFMILASAAFATMNLLSKLAVGVNSYQKTFLTNVVATLIVCFIIAYKKGSFFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K++ K + YAL + + P ++ + +
Sbjct: 62 KKESRKYLLVR------GVTGTLSILTNYYALDKMFLSDATILTKLAPFFTIIFSYLLIS 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q ++ L + + ++ SA +
Sbjct: 116 EKITKKQFTLLIVAFAGSLFVIKPQFSTAIIPSLIGVASAAFAGIAYTMIRVIGDKEDFW 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + S + + + L L+ G+ + + K A S +
Sbjct: 176 TIILSFTSIATIVMLPSMFMNTENLTLQNILLLVSAGIAFTLGQVALTIAYKNAPASEIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +Y ++ + K+ D + + I+V + ++ +L S K
Sbjct: 236 MYDYIGLIIAAIYGFMFFKEIPDFLSFTGYIIIVGSSLLNILGNKKTSNKE 286
>gi|314933041|ref|ZP_07840407.1| putative membrane protein [Staphylococcus caprae C87]
gi|313654360|gb|EFS18116.1| putative membrane protein [Staphylococcus caprae C87]
Length = 288
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 101/288 (35%), Gaps = 6/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + + + ++ + + V + R L ++ F I+
Sbjct: 2 NPKVKGIIAILISAVGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFII------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 56 KQPMFGKLSSQPLLISRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + +IA +S A V +
Sbjct: 116 EKVRKYQISAMIIAILGMLLIVKPEFSSSVIPSIAGLFSGIFAASAYTCVRALSTREKPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF VV F ++L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVVVLIPFSIITFEPMTTVQVIYLLGAGLSAAVGQIGITLAYSFAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I Y + + + + + D + T+ + +++ A S
Sbjct: 236 IFTYASIIFTALFGFILFGETPDMLATVGYVVIISASYYMFEKARRES 283
>gi|28199821|ref|NP_780135.1| hypothetical protein PD1954 [Xylella fastidiosa Temecula1]
gi|182682572|ref|YP_001830732.1| hypothetical protein XfasM23_2060 [Xylella fastidiosa M23]
gi|28057942|gb|AAO29784.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182632682|gb|ACB93458.1| protein of unknown function DUF6 transmembrane [Xylella fastidiosa
M23]
gi|307578853|gb|ADN62822.1| hypothetical protein XFLM_04270 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 311
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 99/294 (33%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + + + + +G+ + ++ Q+ E+ R + L + I+
Sbjct: 3 TQRQLPLRAAMLMLFSTLSFGMMAITIRYASTQIPTTEIAFFRNAFGLLVLLPLILGPGK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + + +A+ + TP+ + L S
Sbjct: 63 PLPRTQHGPRYIARSML-------GLISMLCNFWAISHLPLTQAITLSYSTPLFATILAS 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L E + +++A L +L++ + +A A TI +
Sbjct: 116 LRLHEVVRLRRLLAILAGFAGILVLLQPWSSTFSPALLVALVAALLNAIITIQMKQLSHL 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ F+V + + + ++LI G+ + ++ ++ ++
Sbjct: 176 DPPDTVVFYTYAFWVPLSLPLALWQWHWPEGVEWVWLIATGIFGTIGQLLWIRALRLGEV 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
ST+ + + L+ + ++ + +D + I++ A V + + +
Sbjct: 236 STLQPIGFMQLPLVTLLGWWLFGEHLDRYTALGASIIIGANVYITHREAVLARR 289
>gi|121534577|ref|ZP_01666399.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
gi|121306829|gb|EAX47749.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
Length = 292
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/291 (9%), Positives = 94/291 (32%), Gaps = 13/291 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+++ ++ L + ++WG T + + L + + R + L +F A++
Sbjct: 6 MAQAGGVSRRVVADLSLLFVTLIWGTTFVVVKNALADIGPYWFVGIR--FGLAFLFLAVL 63
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
Y ++ + ++ + +L + L + F ++ V+
Sbjct: 64 YHRRLVAAWRGHVR------LAGLIGLVLFSGFSLQTIGLKYTTAANSGFITGLSVVLVP 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTI 188
+G + ++ + + ++ L ++TL + L + +A
Sbjct: 118 VIGRFWGQKGPGPATVAGIISAVIGLGLLTLSNDFRLNTGDVLTLLAAVAFGTHIVMVGQ 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + A+ +V + + + +
Sbjct: 178 YASKGDAVVLAILQIGAVAVAGLVGGLAFEPTPTNFSREVWIALAVTAIPATAVALVVQN 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + I+ P+ +++ +L + + + I ++V M++
Sbjct: 238 TMQRFTTATRTAIIFAMEPVFAGLAAYLLLGEILTVKQLIGCALIVAGMLI 288
>gi|282163482|ref|YP_003355867.1| hypothetical protein MCP_0812 [Methanocella paludicola SANAE]
gi|282155796|dbj|BAI60884.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 304
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 97/283 (34%), Gaps = 13/283 (4%)
Query: 27 TLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F I WG + + L+ + +E+ S R + P + A + G D
Sbjct: 14 MIALFAINIFWGGSFVANAIALKSIGPIEIASLRFFIAAPLLAAATYLWKGKDIFKFDI- 72
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + T + + + + A S + +FL ++FL E+L+
Sbjct: 73 --KDLGTIIIMALTGVTLQYVIQVTAQEYTTANNASLLINTSVFFIIFLSALFLNEKLSR 130
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
+I+ +++ L + ++ + AV WS Y K I
Sbjct: 131 WRIVGSVVGFLGVAVLVTKGSLSFDLSHSTGDIMILVCAVLWSVYSIYGKKIASKYHPLT 190
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + + + + + +++ ++R
Sbjct: 191 VLNYMFIIGTICLIPFYLLTPHLPITSIPLDAIGAIVFLAIFCSIIAYLVYNVALERMDA 250
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S VG+ Y PL IV S IL + + +V++ M +
Sbjct: 251 SKVGLYIYFVPLSTIVLSWLILGETMSMATIGGGLMVLLGMYL 293
>gi|269837266|ref|YP_003319494.1| hypothetical protein Sthe_1237 [Sphaerobacter thermophilus DSM
20745]
gi|269786529|gb|ACZ38672.1| protein of unknown function DUF6 transmembrane [Sphaerobacter
thermophilus DSM 20745]
Length = 319
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 106/308 (34%), Gaps = 10/308 (3%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSV---LEVISHRVLWSLPG 66
+ S A ++ +L V A LW + + L + +++ R+ +
Sbjct: 2 ARRSPSNSTARSRALVPSLAVIAAASLWSTLGISYEILLHGGGTDRVTMVTLRLTIAALV 61
Query: 67 VFFAIVYFSGG-LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
V + L + + + G++ F +A+ + F ++ L + +
Sbjct: 62 VLAYALMRRPEALRVPRAARASLLGTGVVSFGVFYVALVYAFHWSSVPVATVLLYTAPAW 121
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
V +FLG + + + A LL + + + +G L A +SA ++
Sbjct: 122 VALGEHLFLGYRMTRTA--TIVLGATLLGAVLVADILRGTGELTLKGIAAGLFSAVTYSS 179
Query: 186 K----TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ S + + + I AL + G + + L +
Sbjct: 180 MSLFGKRAMESVPPLTVMVYGMGIGALCLIPVKLLVSGPTLPEPGLLLRIALWPALAVTV 239
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++++G+ + ST I+ P+ I + IL Q + + +V+ A+V
Sbjct: 240 VPVALYTWGLSMLRPSTASILATVEPVFAIALAWLILDQHLHPAQIAGAALVLGAVVYLS 299
Query: 302 LPTVINSG 309
L +
Sbjct: 300 LNPSRGAR 307
>gi|193077765|gb|ABO12634.2| membrane protein putative [Acinetobacter baumannii ATCC 17978]
Length = 296
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 101/287 (35%), Gaps = 9/287 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ L +GTL + A +L G L+ S + ++ R L S + ++
Sbjct: 1 MDDHHLKRKVGTLEMVIAMLLSGSIGLFV-IKSGQSPVNIVFFRCLISALCLIPICYFYG 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ K + ++V S ++ +W A L + Y V P + +FLG
Sbjct: 60 HFRKV----YFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLG 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ E+LN ++ ++ + L+++ + S +
Sbjct: 116 ALVFHEKLNKNDVLWTIVAFIGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITK 175
Query: 196 FFIEMCVLAIPALF----YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
L I + + F + L +F++ + I
Sbjct: 176 KLSNTPPLLIVFIQTLSGAIAMTPFMSVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
K+ L+ + I+ + P+ IV F + + + + G++++ ++
Sbjct: 236 KKIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVL 282
>gi|251794650|ref|YP_003009381.1| hypothetical protein Pjdr2_0615 [Paenibacillus sp. JDR-2]
gi|247542276|gb|ACS99294.1| protein of unknown function DUF6 transmembrane [Paenibacillus sp.
JDR-2]
Length = 306
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 82/302 (27%), Gaps = 7/302 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +L + A +WG + + +E + R + + I
Sbjct: 2 KQQAQLKSSLLLILAAFIWGFAFVAQRQGMEHTGPFTFNAVRFVLGAISLLPLIWIMDRK 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVH-----WGFFIYALLTRQGFLTSFSYFVTPVISV 132
K L+ T L + + + + Y V
Sbjct: 62 SGQTKAQLRGSFRSASKYGVCTGLILFVGASLQQIGLMYTTAGKAAFVTGLYIVIVPFFG 121
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
++A + + L + L G L + + +
Sbjct: 122 LFLKQRFGVNSGIGAVLAVIGLYLLCMTNDLTLGKGDLYELVGALFWSVHILMIDRFSRK 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++G + + + ++ + + + L G + + G K
Sbjct: 182 TDGLKLSLAQILTCSVLSFIAAFSTEKVELSGLSDAMIPLLYGGICSVGIAYTLQIVGQK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT-VINSGKN 311
A + I+ + + +L + + I +++ M+V LP + KN
Sbjct: 242 NAHPAQAAIILSLETVFAAIGGYLLLDEVLGVRAGIGCMFMLVGMIVPQLPPLWRVNRKN 301
Query: 312 KT 313
++
Sbjct: 302 RS 303
>gi|323694749|ref|ZP_08108907.1| hypothetical protein HMPREF9475_03771 [Clostridium symbiosum
WAL-14673]
gi|323501186|gb|EGB17090.1| hypothetical protein HMPREF9475_03771 [Clostridium symbiosum
WAL-14673]
Length = 345
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 92/301 (30%), Gaps = 19/301 (6%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLP 65
+ ++ + L G L V I+WG + + ++ + ++++R +
Sbjct: 34 MEATKGKMNDKTVKLLASAGLLLV---TIVWGSAFVVMKNSMDVIKPTYLLAYRFTIATA 90
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
G+ + + L + + F Y L +F
Sbjct: 91 GLILIF--------RKQVKSMTWADIKCGALLGIFLFISYYFQTYGLKFTTASKNAFITT 142
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTW 178
+ +I FL F K + + I AA + ++ L +++L
Sbjct: 143 LYVIIVPFLHWFFNKVKPSGNNITAACIAVVGLALLSLKGDLTVNFGDFLTFICGFCFAL 202
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
R T+ + ++M A+ A F L +
Sbjct: 203 HMVFIDRYTMCYSPIKLTVVQMASCAVFAWLVAAVFEGPCDLSVFTDRGTVVSVLYLGVI 262
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ F + + G ST I+ + ++ SV L++ + + ++ A +
Sbjct: 263 SSMLCFLLQTVGQTYLSASTSSILLSFESVFGLIFSVIFLQESVTARMLLGCALMFAAAI 322
Query: 299 V 299
+
Sbjct: 323 L 323
>gi|291556447|emb|CBL33564.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Eubacterium siraeum V10Sc8a]
Length = 296
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 93/292 (31%), Gaps = 8/292 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ P G L + + + + + + ++ R L + ++ G
Sbjct: 6 SKISPKHKGVLCIISSAFCFAFMGAFVRLAGDLPSVQKSFFRNLVAFIFAAAILIRQKGS 65
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +G L+ + + YA+ + ++P + ++
Sbjct: 66 F-----LPQKKSNIGALLIRSVCGTLGILCNFYAVDHLALSDAAMLNKMSPFFVIVFSAL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL+ER N +Q + ++ L++ S L + + + A G
Sbjct: 121 FLRERTNLVQTLGVIIAFAGSLLIIKPSLANLELVPSLLGFLGGMGAGAAYTAVRWLGIR 180
Query: 198 IE--MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E ++ + F + F + L L+G GL + + K A
Sbjct: 181 GEKGPYIVFFFSGFSCLVTLPFLLFDFHVMTWQQWLVLLGAGLAAAGGQFSITAAYKFAP 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYLLPTVI 306
+ + +Y+ + + + Q D I + ++ + + +++
Sbjct: 241 AKEISVYDYSQIIFSALLGFILFSQLPDIWSFIGYVVICGVGVAMFIYNNRR 292
>gi|91775486|ref|YP_545242.1| hypothetical protein Mfla_1133 [Methylobacillus flagellatus KT]
gi|91709473|gb|ABE49401.1| protein of unknown function DUF6, transmembrane [Methylobacillus
flagellatus KT]
Length = 294
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 88/283 (31%), Gaps = 7/283 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L + A L+ + +++L + +I R + + ++ SG
Sbjct: 6 KPQLLQGILCMCGAIFLFAGSDALSKYLAGFYAVVMIIWVRYIIHSSLMLVVMLPRSGFA 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
G+ + +L I AL + ++TP+I L
Sbjct: 66 VFKTRNPGLQLLRGLCMVGTNMLF------ISALRYIPLAEGTAIVYLTPLIVTILSGPL 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ER+ LQ A L + +L+M G S+++ +A+ F+ +
Sbjct: 120 LGERVRPLQWFAVSLGFVGVLVMLRPGGALFTSVSLLAVGAAFTFSLYQLITRKLNATDS 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L F + + L L+ G+ + + K +T
Sbjct: 180 SATTNLLSGLVGSAALTFIAPFFWQTPSAHHALLLLALGVSALLSHLLMTEAYKHTNPAT 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ Y + + D I I+ ++ L
Sbjct: 240 LAPFTYGQLIFAGLIGYLFFGHIPDLYSVIGITIICAGGILVL 282
>gi|327191527|gb|EGE58542.1| hypothetical protein RHECNPAF_2970024 [Rhizobium etli CNPAF512]
Length = 331
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 91/295 (30%), Gaps = 5/295 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+++ A G L + A + W + +Y++ L V I+ R L+ + ++
Sbjct: 37 ARQLAGSEHEKGVLLIVAATLAWSASGVYSRLLTT-DVWTAIAWRSLFGGLFLLIPCLFL 95
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GG+S + + G FI AL + Y TP I
Sbjct: 96 EGGISRRQW---RSVLHPTGLAMIACQTFSQGCFIGALYMTTVANVTMIYATTPFIVALF 152
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G + LKER+ +IA + + + ++ S I + + + + +
Sbjct: 153 GWLILKERVARRTMIAGAVSLFGVGVIV-ASSIGGGTGWGDLLALGMTASFALVIIIPRI 211
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + F + G L + S +F G KR
Sbjct: 212 NAGVPSLPPTVVSAFLTLVIFAPFGSVGSLDLHNWIVLAAFGATNFSLALVLFLAGAKRM 271
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ +L + + I++ A+ + S
Sbjct: 272 PPAEAALIGTMEIVLTPFWVWLLFSEEPPIATYFGGAIILGAVFWHTAIDARRSR 326
>gi|291613806|ref|YP_003523963.1| hypothetical protein Slit_1339 [Sideroxydans lithotrophicus ES-1]
gi|291583918|gb|ADE11576.1| protein of unknown function DUF6 transmembrane [Sideroxydans
lithotrophicus ES-1]
Length = 308
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 100/305 (32%), Gaps = 14/305 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+A +G +F A + + + + +L+ V + +++ R+++S+P ++
Sbjct: 7 STSAHRDVFLGVVFALLAAVGFSAKAILVKLAYLDNVDAVTLLALRMVFSVPFFIGVAIW 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + +G+ + + L L F+ P ++V
Sbjct: 67 VRRHHAAPLNVHDRLLVLGLGLIGYYCSSF---LDFLGLQYISAGLERLILFLYPTMTVI 123
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFA 184
L ++ K + + A LL + ++ LH L A +++S Y
Sbjct: 124 LSALLYKRAIGRKVMAAMLLSYAGIALVFLHDVGAKEGGIVLGASLVFASTLSYSIYLVG 183
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
F ++ A + + L L +
Sbjct: 184 AGHAIARIGTLRFTSYAMVVACAASLLQFGAMRPLSALDLSWHVYGLSIAMAIFSTVLPV 243
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S+ I+R + ++ P+ I + IL + I ++ +V+ ++V L +
Sbjct: 244 FLLSFAIRRIGSGSASLIGSIGPVSTIYMAYAILGEEISLLQIAGSSLVLAGVLVISLNS 303
Query: 305 VINSG 309
Sbjct: 304 KREVK 308
>gi|194367330|ref|YP_002029940.1| hypothetical protein Smal_3558 [Stenotrophomonas maltophilia
R551-3]
gi|194350134|gb|ACF53257.1| protein of unknown function DUF6 transmembrane [Stenotrophomonas
maltophilia R551-3]
Length = 297
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 78/291 (26%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +LWG + T+ V +++ R L + + +
Sbjct: 3 YLFPILACLLWGANTIVTKLASGSVGPIDIGFFRWLVAAILLLPFALPRLCQNLPTVRAN 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
V + + YA + P+I++ L VF+ +
Sbjct: 63 LGRFLVLGCLGGVMYQCLA----YYAAHFTSATNMGVIQALIPLIALALSRVFMGHPVRG 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I+ A++ + ++ + G+ + V A+ +
Sbjct: 119 TSILGAVISSIGVVAVVSQGDLARLATQGLNRGDAIMLVGALAFAAYNVLMQRWKIPLSV 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E L A ++ + + G+ R +
Sbjct: 179 LESLFLQATAASLILLPLQLLIGTGVDNLTAVGCIGFAAVCASILAPLTWMTGLSRLGAA 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V P++ +V +L + + + V +V +
Sbjct: 239 RVSGFFNLVPIVTAALAVMLLGESLSGWVLGGGLLAVSGVVFAEYSARRAA 289
>gi|209551405|ref|YP_002283322.1| hypothetical protein Rleg2_3834 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537161|gb|ACI57096.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 289
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 102/292 (34%), Gaps = 7/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L AY+ + + L + V +++ R + + G
Sbjct: 1 MKNSVSLGILLTSLAYMAFTFHDAIIKILTSSIPVWQILFFRS------LTILTGCLAFG 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + ++ + +L W + A Q + Y+ P++ L +
Sbjct: 55 RGKLVRQTRRSPIIKPMIARSILLLCAWLSYYSAASRLQLAEVTTLYYAAPIVGTVLAWL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE + + +A + + +LI G+ + +A +A + + +
Sbjct: 115 ILKEEVTPARWLAVGVGFVGVLIACNPIGLTISWPVYLALQAAVLWASAMVLLRKTSLHE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + +F++V G + + ++ LI G++ G+++A +S
Sbjct: 175 KTIVQLTVSNVFFLVMTGIAVLYTWKTPDMTQLPLLIATGVVAGGAQFALFEGMRQAPVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ EYT+ + + I +++ A ++ ++ +
Sbjct: 235 VLAPFEYTSLVWAFLLGYLIWADIPTPNVVFGAALILAAGLIIIVSEKLRRR 286
>gi|226310293|ref|YP_002770187.1| hypothetical protein BBR47_07060 [Brevibacillus brevis NBRC 100599]
gi|226093241|dbj|BAH41683.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 300
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 92/288 (31%), Gaps = 12/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P +G L++F + +G+ ++ + VSV ++ R L + F +++ L
Sbjct: 2 NPLYVGVLYIFGSAAGFGVMSIFAVYAYEAGVSVSTLLFLRFLLATALFFGLLLWRKESL 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K + + M + + F A+ + + + PV L
Sbjct: 62 RLDK-----RQVLAMFCLGGILYTLQSLSFFSAVQYIPTSMAALLLYTFPVFVAILSYFV 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----WSAYCFARKTIPVGSS 193
KERL +IA L+ ++ L ++ S + + + + + + V
Sbjct: 117 EKERLTKKTVIAMLITLVGLGLVLGLSFGGIQPVGVLLALAAALFYSVYIVVGNRVVKGV 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + GG L F G++
Sbjct: 177 SSYVTSAYIALFATISTFFIALKDGGVDLSFAVQGWWAILGIVVFSTVVAISFFFRGLQL 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ P++ S + + ++ + V++ + +
Sbjct: 237 IGSTKASVLSTLEPVVTFGFSALLFGEAFSLLQLLGGCAVLVGAALIV 284
>gi|13475455|ref|NP_107019.1| hypothetical protein mlr6530 [Mesorhizobium loti MAFF303099]
gi|14026207|dbj|BAB52805.1| mlr6530 [Mesorhizobium loti MAFF303099]
Length = 317
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 89/301 (29%), Gaps = 3/301 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + +G L VF + ++W +F+ +I R +W+ + + +
Sbjct: 11 VASTFSPREERVGMLLVFLSALMWSFGGTIARFITVGDSWTIIFWRSVWAAAFLVLFMTW 70
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G +L+ + A+ F+ AL P+++
Sbjct: 71 RDGWRGMLRSF---RDMGLPGLGVGFCFAIASTAFVVALAYTTVANILLMQAGVPLLAAL 127
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L +ER+ + +A +I + IM S +S F V +
Sbjct: 128 LAWALFRERVGVVTWVAIAAVIAGVAIMVSESLDGAVSPIGDGLALLIAFMFSIATVITR 187
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M S F + + F+ G +
Sbjct: 188 RFASVRMTPATCLGTLLAAGFAASQAAAFTVSAADMGFLFAFGVVNLGIGLAFFATGARL 247
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ ++ P+L + I + + +VV A++V++ + +
Sbjct: 248 IPAAIAALLGTFEPILGPIWVWLIHSEVPSGRTIVGGAVVVTALLVHIGFEFKRQARPRR 307
Query: 314 K 314
Sbjct: 308 A 308
>gi|322436569|ref|YP_004218781.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX9]
gi|321164296|gb|ADW70001.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX9]
Length = 313
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/314 (13%), Positives = 92/314 (29%), Gaps = 25/314 (7%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
A +G A LWG + + L +++V ++ +R L+ + +
Sbjct: 1 MPQAPPNRTLGFAACALASSLWGCGFFFGKIALAEMNVGAMVFYRFLFGTVVLIPLLFTH 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ +L S + V + Y L S PVI
Sbjct: 61 KPRF-------TRRDWLILLAASFLGVPVQFLLQFYGLSLTTVSHASLMVGTMPVILAVG 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----------------AIAVT 177
++ ER++ +A L ++ L + + +
Sbjct: 114 AAIHAHERMDRTGWLALSPSTLGAALIALSAHPHGPNQATLTGDLIVVVSLLIALFWILM 173
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
S +L LF +V + + +
Sbjct: 174 NKHLMDGVSPEEKHSPIAVTSYGLLLGTVMLFAIVPPIWGLPPIHHISVKAWLALIASGV 233
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
L + ++++G+ + S G++ PLL + V +LK+ + + +++ A
Sbjct: 234 LCTATTTLLWNWGLTQVPASQAGVLLNMEPLLGSILGVVVLKETLGPTAWVGGLMILAAA 293
Query: 298 VVYLLPTVINSGKN 311
V + + K
Sbjct: 294 VTLTTHSKTHIRKE 307
>gi|225390681|ref|ZP_03760405.1| hypothetical protein CLOSTASPAR_04436 [Clostridium asparagiforme
DSM 15981]
gi|225043299|gb|EEG53545.1| hypothetical protein CLOSTASPAR_04436 [Clostridium asparagiforme
DSM 15981]
Length = 318
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 101/312 (32%), Gaps = 11/312 (3%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLW 62
T++ + G + + MG++ WG++ QFL V +++ R+L+
Sbjct: 3 TRQIPAVGKTSDQKRSREFMGSVMTIVGGACWGLSGCCGQFLFERRGVEAPWLVALRLLF 62
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+ + + + L+ +LVF+ + + A+ T +
Sbjct: 63 AGLMLIINGFILNR-KNNLRIFKHKRDVRHLLVFALCGITFCQLSYFMAVQTSNAGTATV 121
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC 182
+++PV+ +FL + R L+++A L + ++ H I L L
Sbjct: 122 LQYLSPVLILFLVCFKGRRRPAGLELLAIALSLTGTFLIGTHGNIHGLQLTPQGLTWGLL 181
Query: 183 FARKTIPVGSSEGFFIEMCVLA-------IPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
A + + G + + ++
Sbjct: 182 AAVSAVIYTTLPGTLVNRYDIYQVLGFGMFIGGLFMCLLVRPWNYTVVWDGGTWAAMFGV 241
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + F ++ G+ + P+ I+ SVF L + FG++++
Sbjct: 242 IVVGTAVAFGLYLQGVSIIGPLKGSLYSGVEPVSSIIISVFWLHTSFTLPDFLGFGLIMV 301
Query: 296 AMVVYLLPTVIN 307
+++
Sbjct: 302 TVLILAKTGGRQ 313
>gi|153832125|ref|ZP_01984792.1| permease of the drug/metabolite transporter [Vibrio harveyi HY01]
gi|148871740|gb|EDL70581.1| permease of the drug/metabolite transporter [Vibrio harveyi HY01]
Length = 299
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 93/291 (31%), Gaps = 16/291 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G F+ + + + + L + V E+++ R L SL + + K
Sbjct: 11 IGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDV--------KRK 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L + + Y++ T + ++ PV + L FLKER
Sbjct: 63 GISVWGNNKPLLFARGAVGTMALMCVYYSVTTLPLAEATIFQYIHPVFTALLAVFFLKER 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA------YCFARKTIPVGSSEGF 196
+ I L +L + +M P A+ + + + + V
Sbjct: 123 IQSSTFICIALCLLGVYVMVRPETGPDAEHALPMFSVMIAILGAFGSSIAYVIVRKLSQT 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L + + G+ F + ++ T+ L+ G+ + ++ +
Sbjct: 183 EDSSVIIFYFPLVALPASILLIGDQFVMPDLYLTMMLVLVGVFTQIGQLGLTKAMQTQEA 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + +V + + + ++V ++ + +
Sbjct: 243 GKASAYSYVQIIFSVVLGIVFFGELPSAWTYLGGALIVTGALINVFGQHLK 293
>gi|288800220|ref|ZP_06405678.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332433|gb|EFC70913.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 307
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 25/299 (8%), Positives = 96/299 (32%), Gaps = 5/299 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G + + I +G PL++ + E + L ++ +R ++ + ++
Sbjct: 4 NNNNIRGLVEASISAIAFGTIPLFSIPVLNEGIDSLSLLVYRFAFAGIIILLVLIANKRS 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + +L + I + ++ + + + + + F +
Sbjct: 64 MHINRGDAFRIMFISLLYAVSAISLIEGYKYMSSGIATTLLFSYPIWTALLMGIFFKERL 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA--YCFARKTIPVGSSEG 195
++ I ++++ ++ + L + + Y + +
Sbjct: 124 KFGSIISIFLAIGGVVLLSGVIDGDFQASYKGLLCELFSGFLYATYMVILPVMRIRKMSS 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ V L ++ F+ G + + + + +K+
Sbjct: 184 LKLTFYVFFFTMLLISFYSLFATGGIKGIPSTSSFINLALLGLVPTAISNITLIMALKKV 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ I+ P+ + V + +P + +++ +++ +L ++K
Sbjct: 244 SSTMAAILGAFEPVTAMFVGVLVFSEPFTMPIALGLLLIIASVIFLVLSNKKAQEQDKQ 302
>gi|73663297|ref|YP_302078.1| permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
gi|72495812|dbj|BAE19133.1| putative permease [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 295
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 97/287 (33%), Gaps = 6/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ + I + L
Sbjct: 2 NPKVKGIIAILVSAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLYFIYKYKQPL-- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 60 ----FGKLSSQPLLISRSTLGLIGVLLNIYAIDHMILSDADTLMKLNPFWTILLSLIFLN 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ + QIIA ++ I +L + + AI +S A V +
Sbjct: 116 EKVRNYQIIAMVIAIFGMLFVVKPEFSSSMIPAIGGLFSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + F +V F ++ ++LIG GL + + A +
Sbjct: 176 TIVFYFSFFSIVVLIPFTIFTFEPMSMMQVIYLIGAGLAAAAGQIGITLAYSYAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + + + + D + + I++ +
Sbjct: 236 IFTYASIIFTAFFGFILFGESPDFYAILGYVIIIASSYYMFEKARRQ 282
>gi|300692034|ref|YP_003753029.1| hypothetical protein RPSI07_2392 [Ralstonia solanacearum PSI07]
gi|299079094|emb|CBJ51757.1| conserved membrane protein of unknown functionDUF6, transmembrane
[Ralstonia solanacearum PSI07]
Length = 312
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 90/290 (31%), Gaps = 10/290 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G L + + +G ++T + + V +SL + +V + +
Sbjct: 17 KLLGVLLIAVSAASFGAMAIFTHYAYASGANTIGLLAVRFSLAALALMVVMRVRRIGIPP 76
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
P+ G+ A F AL L + ++ P+ L +VFL ER
Sbjct: 77 ----WPRVAGLAAMGGIGYAGQSFAFFTALHYAPASLVALLLYLYPMFVTVLAAVFLHER 132
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
L + ++A +L + + +G+ S A + +
Sbjct: 133 LTPVALLALVLCSVGAGLTVGGAGLSGGSALGVVLGVAAAVIYSVYITVGARVTRGVDPI 192
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ A+ Y F L GL F G+++
Sbjct: 193 ACTTVICTAAAVVYAGLTVAGAPAQFPGSVAGWAASLAIAGLSTVIAILAFFAGLQKLGA 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ P++ + + +L + I + +++ ++
Sbjct: 253 AQASMLSTLEPVVTVALAALLLGESIGAAQMAGGALILAGVLWLTRADTR 302
>gi|209549034|ref|YP_002280951.1| hypothetical protein Rleg2_1431 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534790|gb|ACI54725.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 293
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 85/286 (29%), Gaps = 5/286 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +F A ++ + ++ L + V R GGL T
Sbjct: 7 GYVFALLAITIFSLQDAISKHLASAYPPIFVTMIRYWAFALFTIILASKMRGGLKATART 66
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + V + +LAV I + + TP++ L L ER+
Sbjct: 67 KRPL----LQVVRSVLLAVQVVLAITCFAIIGLARSQAIFSATPILIALLSMPILGERVG 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +A + + +L++ G + S + FA I +
Sbjct: 123 WRRWMAIVAGLFGVLLILKPEGEFFDVKLLLAITSCFNFAFYVIATRLVSRDDSAITSFF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + G ++ + D ++ + + + V + Y
Sbjct: 183 YTGVIGGITMTIIGPFYWSWMSPGDWGWMALVCMTSISSHYFLIRAYDLLDAAAVQPLTY 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + V I + + I +VV A + + + +
Sbjct: 243 LSLVYASIIGVTIYDETLSLNTIIGSIVVVAAGIFTVWREHVVGRR 288
>gi|150376417|ref|YP_001313013.1| hypothetical protein Smed_4275 [Sinorhizobium medicae WSM419]
gi|150030964|gb|ABR63080.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 331
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 94/293 (32%), Gaps = 8/293 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + +++ + + ++L SV +V+ R + + + ++ SG L
Sbjct: 45 ARAGVIVMLLGMLMFSVNDVMGKWLVATYSVGQVVLIRSI-AAVLLLAPFLWVSGPKKLF 103
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ +A ++A ++ ++ + P+ + + LKE
Sbjct: 104 TLERPGLQLARVVASTAEVIAFYFA-----VVYLPLADVMTYWLAAPIYVAAISPLVLKE 158
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + A + + +++ S A+ + FA I S G
Sbjct: 159 PVGWRRWTAIAIGFVGVVVALEPSSQAFTLPAVISILGSMAFAFMMISGRSLRGTPDTTL 218
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V + DT L G++ + + +K A +TV
Sbjct: 219 AFWQI-AGAAVAGLVWAPFDWTPLKPLDTALLCLLGVVAMVAHVLVNRALKLADAATVAP 277
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++YT I I + G++V + + + + K
Sbjct: 278 LQYTLLFWAIFFGWLIFGDTPRLSMVLGAGLIVASGLFIFFREQQLKRQGRLK 330
>gi|110803468|ref|YP_697462.1| hypothetical protein CPR_0125 [Clostridium perfringens SM101]
gi|110683969|gb|ABG87339.1| putative membrane protein [Clostridium perfringens SM101]
Length = 297
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 6/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A + L ++ V+ + + + V F I G
Sbjct: 2 NSKFKGIIFMILASAAFATMNLLSKLAVGVNSYQKTFLTNVVATLIVCFIIASKKGSFFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K++ K + YAL + + P ++ + +
Sbjct: 62 KKESRKYLLVR------GVAGTLSILTNYYALDKMFLSDATILTKLAPFFTIIFSYLLIS 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q ++ L + + ++ SA +
Sbjct: 116 EKITKKQFTLLIVAFAGSLFVIKPQFSTAIIPSLIGVASAAFAGIAYTMIRVIGNKEDFW 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + S + + + L L+G G+ + + K A S +
Sbjct: 176 TIILSFTSIATIVMLPSMFMNTDNLTLQNILLLVGAGIAFTLGQVALTIAYKNAPASEIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +Y ++ + K+ D + + I+V + ++ +L S K
Sbjct: 236 MYDYIGLIIAAIYGFIFFKEIPDFLSFTGYIIIVGSSLLNILGNKKTSNKE 286
>gi|331003310|ref|ZP_08326814.1| hypothetical protein HMPREF0491_01676 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412659|gb|EGG92043.1| hypothetical protein HMPREF0491_01676 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 287
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 94/284 (33%), Gaps = 13/284 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +G + + I+WG + + L ++S E++S+R L + + +
Sbjct: 1 MKKNLGIIGLVIVTIIWGGGFVASDIALNELSPFEIMSYRFLIASIIMGVFAWRNLKTIR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ L + I L +F V+ F+
Sbjct: 61 --------KDEIIYGSILGIALFSGFALQIIGLKYTTPSNNAFLTATNVVMVPFIAYFIG 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA----YCFARKTIPVGSSEG 195
++ LN II + ++ + I++L S + + + + A + I
Sbjct: 113 RKNLNKADIIGSFTALIGVGILSLQSNFSIGTGDLFTLFCALGFAFQIYLTGIFGKKIRP 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + ++ FSG + L + + + + + + + K
Sbjct: 173 SILNFLQMFTAFCLSIIGLLFSGSINLSLSKQGFSAIIYLGVVSTALCYFLQTAAQKHVD 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I+ + + S+ +L + + I +++ A+++
Sbjct: 233 ETKSAIILSMEAVFGTLFSIILLGEKPNLKMVIGGIMILSAVLI 276
>gi|323484842|ref|ZP_08090198.1| membrane protein [Clostridium symbiosum WAL-14163]
gi|323693788|ref|ZP_08107983.1| integral membrane protein [Clostridium symbiosum WAL-14673]
gi|323401838|gb|EGA94180.1| membrane protein [Clostridium symbiosum WAL-14163]
gi|323502174|gb|EGB18041.1| integral membrane protein [Clostridium symbiosum WAL-14673]
Length = 307
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/297 (9%), Positives = 83/297 (27%), Gaps = 11/297 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
T G F +WG + Q+L + + V R++ + + + +
Sbjct: 11 KSKTARGIFFTLAGGTMWGFSGTCGQYLFTYKNLDSAWVTVTRMICAGIIL-LVLAFIKQ 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +FS L ++ A+ + ++ PV+ + +
Sbjct: 70 RKEMKEIMQDKRDRRQLFIFSIFGLMFCQYSYMTAISHSNAGTATVLQYLGPVLIMIVSC 129
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIP 189
K+ + ++ A +L + ++ H L+ + + +
Sbjct: 130 FMAKKLPSGREVFAIILAVAGTFLLATHGNIHSLVISNLGLAWGLLSAVALMSYTMLPEK 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ G + + ++ + + + F ++
Sbjct: 190 IIGRWGSTVVTGYGMLIGGIFLFFATRYWTVRVTFDLGTVLGLAAIVLIGTALSFTLYLQ 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
G+ ++ P+ V S L + ++ +++
Sbjct: 250 GVSDIGSVKASMLACIEPVSATVISALWLGTDFTVMDFAGLAAIITTVLLLTQRKRR 306
>gi|74318003|ref|YP_315743.1| integral membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74057498|gb|AAZ97938.1| integral membrane protein, DUF6 [Thiobacillus denitrificans ATCC
25259]
Length = 308
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 98/300 (32%), Gaps = 14/300 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++G LF A I + + + +L++V + +++ R+ +S P ++
Sbjct: 11 TRNALVGVLFALLAAIGFSAKAILVKLAYLDRVDAVTLLALRMAFSAPFFIGVALWARRQ 70
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
D L V +L + L L F+ P ++V L ++
Sbjct: 71 ---HADPLSPRDRVLVLGLGLLGYYLSSFLDFLGLQYISAGLERLILFLYPTMTVVLSAL 127
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTI 188
K + ++A + + ++ H L + +++S Y
Sbjct: 128 VYKRAIGRTVMVAMGVCYAGIALVFFHDLGTLQGGIVLGASLVFASTLSYSVYLVGAGHA 187
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F ++ + + E L L L + S
Sbjct: 188 IARIGAARFTAYAMIVATLASLLRFAFTHPIEALGLPLRVYELALAMAIFSTVLPVFLLS 247
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y I+R + ++ P+ I+ + L++ + ++ +V+ +++ L +
Sbjct: 248 YAIRRIGSGSTSLIGSIGPISTILMAYVFLQEGLSLLQIAGSALVLAGVLLVSLNSRRTR 307
>gi|310830081|ref|YP_003962438.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
gi|308741815|gb|ADO39475.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
Length = 299
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 96/285 (33%), Gaps = 1/285 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + WGI+ + T+ L+ SV +I R + +F
Sbjct: 1 MQKIKPYLAISYTLVFWGISFISTKICLQAFSVYALIFGRFAIAAIILFLVKRKLEPEQR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LLK L G++ F+ + G + L+ F + +V L F
Sbjct: 61 LLKKDLPRVLIAGLIGFTGYYVFEAVGVDLTGASMASILLSLVPIFCMLIDTVILKRRFT 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + +I++ L + ++ ++ G I
Sbjct: 121 FIKAGAVAFSVVGVIMIVGLSEIEINPWGCGAMILSGLGWLLYNYLAKPLYSRYTGLDIT 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A A + + FL L+++ + Y ++ + TV
Sbjct: 181 TYLSACIAGVTLPLAFAFPPDFSLFTGEIIINFLFLAVLVSATANLTYMYALRSIPILTV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ P++ IV S +L + ++ + +V+ ++ + LP
Sbjct: 241 TILVNFVPVVTIVFSALVLGETFTALQLLGAALVIASVCLTALPE 285
>gi|220924814|ref|YP_002500116.1| RarD protein, DMT superfamily transporter [Methylobacterium
nodulans ORS 2060]
gi|219949421|gb|ACL59813.1| RarD protein, DMT superfamily transporter [Methylobacterium
nodulans ORS 2060]
Length = 297
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 5/286 (1%)
Query: 25 MGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG ++ AY+ WG+ P++ + L+ VS +++HR+LWS V + +
Sbjct: 1 MGLIYALGAYLSWGLLVPVHFRLLDGVSPWMILAHRILWSSLFVVLLLWLLRRRRARFVP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ +L SA ++ V+W +++A+ + S YF+ P+++V LG++ L ERL
Sbjct: 61 DRRH----ALLGLSALLIGVNWSLYLWAVQNGRMLDASLGYFINPLVAVALGALVLGERL 116
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
LQ A L L + + +G A + + F L
Sbjct: 117 RPLQAAAVGLAALGVGVALAAAGTLPWVALALAVTFALYALIRKLVPIDPILGFCAETFL 176
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+PA + G + T+ L+ GL S F+ R KLST+G+M+
Sbjct: 177 LLPAALAYLAILAPDGAALSALDGRTTVLLVLTGLTTSVPLIWFAAAAARLKLSTLGLMQ 236
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y AP ++ SV + + ++ R IVFG+ IA+ +Y + V S
Sbjct: 237 YLAPSCLLGLSVIVYGETLEPARAIVFGLTWIALALYAVDAVRLSR 282
>gi|239833505|ref|ZP_04681833.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239821568|gb|EEQ93137.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 300
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 87/295 (29%), Gaps = 7/295 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A G LF A ++ +++L S + + R V + G
Sbjct: 7 AMTRKGQGYLFTLLAVTIFATQDGISKYLGTHYSPILITMIRYWVFAAFVLLLAIRSGGI 66
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +F +LA FI+AL + P++ L
Sbjct: 67 AKAAATN-----RPFLQLFRGILLAAEIVTFIFALSRAGMATAQSIFQGAPLLVTMLSVP 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E++ + A ++ ++ +L++ + + + FA + +
Sbjct: 122 FLGEKVGWRRWTAIIVGLIGVLLIINPVNAKFDASLLLPVAAMVMFAVYAVATRAVSKSD 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M + F G + D ++ +
Sbjct: 182 DAMTSFFYTGMAGAAALTFVGSFYLMPIARSDWFWMAALCACGIASHYFLIRAYDILEAG 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
V + Y ++ +V + + + + ++V+ ++ + GK+K
Sbjct: 242 EVQPITYLQLVIGACIAVTVFHEQLTWN-IVAGALIVVGAGLFSVFRERQLGKSK 295
>gi|170736056|ref|YP_001777316.1| hypothetical protein Bcenmc03_3674 [Burkholderia cenocepacia MC0-3]
gi|254248809|ref|ZP_04942129.1| hypothetical protein BCPG_03658 [Burkholderia cenocepacia PC184]
gi|124875310|gb|EAY65300.1| hypothetical protein BCPG_03658 [Burkholderia cenocepacia PC184]
gi|169818244|gb|ACA92826.1| protein of unknown function DUF6 transmembrane [Burkholderia
cenocepacia MC0-3]
Length = 307
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/301 (10%), Positives = 81/301 (26%), Gaps = 6/301 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + L + A +WG + + L+ + R L + ++
Sbjct: 1 MKPDARKHLRANLLMLGAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLMVN 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L + P + + +LAV L + F V+ V L
Sbjct: 61 AASRAQLAAIRREPALLLPGLALGGLLAVSISLQQVGLQYTRIANAGFI-SSLYVVIVPL 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ R+ ALL + L ++ A
Sbjct: 120 MGALARHRIGAGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHLA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + A+ + + + L G L + +
Sbjct: 180 KRHDPLVLAFLQFAVCGVACLAVGLAVEPVSAAMLRGALPTLLYGGLLSVGVGYTLQVVA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A + ++ + ++ L + + + +++ ++ L ++ K
Sbjct: 240 QRDAAPAHAAVIFSMEGVFAAIAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARK 299
Query: 311 N 311
Sbjct: 300 K 300
>gi|168205710|ref|ZP_02631715.1| putative membrane protein [Clostridium perfringens E str. JGS1987]
gi|170662840|gb|EDT15523.1| putative membrane protein [Clostridium perfringens E str. JGS1987]
Length = 297
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 6/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A + L ++ V+ + + + V F I Y G
Sbjct: 2 NSKFKGIIFMILASAAFATMNLLSKLAVGVNSYQKTFLTNVVATLIVCFIIAYKKGSFFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K++ K + YAL + + P ++ + +
Sbjct: 62 KKESRKYLLVR------GVTGTLSILTNYYALDKMFLSDATILTKLAPFFTIIFSYLLIS 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q ++ L + + ++ SA +
Sbjct: 116 EKITKKQFTLLIVAFAGSLFVIKPQFSTAIIPSLIGVASAAFAGIAYTMIRVIGDKEDFW 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + S + + + L L+ G+ + + K A S +
Sbjct: 176 TIILSFTSIATIVMLPSMFMNTDNLTLQNILLLVSAGIAFTLGQVALTIAYKNAPASEIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +Y ++ + K+ D + + I+V + ++ +L S K
Sbjct: 236 MYDYIGLIIAAIYGFMFFKEIPDFLSFTGYIIIVGSSLLNILGNKKTSNKE 286
>gi|107023266|ref|YP_621593.1| hypothetical protein Bcen_1716 [Burkholderia cenocepacia AU 1054]
gi|116690349|ref|YP_835972.1| hypothetical protein Bcen2424_2328 [Burkholderia cenocepacia
HI2424]
gi|105893455|gb|ABF76620.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia AU 1054]
gi|116648438|gb|ABK09079.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia HI2424]
Length = 309
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 91/290 (31%), Gaps = 16/290 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S + G +V + +G ++ ++ V VL ++ R + +
Sbjct: 7 SSSAALQGAFYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAIARHRRV 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 67 AWP------RGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A +L + +M L +A+A+ + ++ G
Sbjct: 121 WWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALAAAVIYSLYIVGGTKATRGV 180
Query: 197 FIEMCVLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I A+ V GF + L + F
Sbjct: 181 DPLATTAIICLSATATLVAIAVVRTAGFGAPPRWPATAGGWASMLAIALVSTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G++R + ++ P++ + + + + + ++ ++ A++
Sbjct: 241 AGLERLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVL 290
Score = 39.5 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%)
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + L + ++ A+ S V ++ Y P + + + +
Sbjct: 63 HRRVAWPRGRALAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWW 122
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPT 304
L + + + + + V + +
Sbjct: 123 LGERLTRAKAVALVLCVAGSALMVGGG 149
>gi|116254811|ref|YP_770647.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115259459|emb|CAK10597.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 301
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 91/290 (31%), Gaps = 5/290 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + A + W + +Y++ L V I+ R L+ + ++ GG+S
Sbjct: 17 KGVLLIIAATLAWSASGVYSRLLTT-DVWTAIAWRSLFGGLFLLIPCLFLEGGIS---RQ 72
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ FI AL + Y P I+ LG V L+ER++
Sbjct: 73 QWRSVFHPSGLAMIACQTFSQVCFIGALYMTTVANVTMIYATAPFIAALLGWVILRERVS 132
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+IA + +L + ++ S I + + + + + +
Sbjct: 133 RRTLIAGGISLLGVAVIV-ASSIGGGTGWGDLLALGMTASFALVIIIPRINPGVPSLPPT 191
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + F + G L + S +F G KR + ++
Sbjct: 192 VVSAFLTLAIFAPFGSVGSLDLHNWIVLAAFGATNFSLALVLFLAGAKRMPPAEAALIGT 251
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+L + + I++ A++ + V S +
Sbjct: 252 MEIVLTPFWVWLLFSEQPPVATFFGGAIILGAVLWHTAIDVNRSRRQHRA 301
>gi|21228695|ref|NP_634617.1| hypothetical protein MM_2593 [Methanosarcina mazei Go1]
gi|20907201|gb|AAM32289.1| hypothetical protein MM_2593 [Methanosarcina mazei Go1]
Length = 324
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 94/290 (32%), Gaps = 15/290 (5%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
V + +L+G+ ++ + +E + ++ +R+L+ + + + K+
Sbjct: 14 AVITSCVLFGMIGIFVKEIEGMEAGSILFYRLLFGFVVILGYLAVSGRIKKVHLKQKKSF 73
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + V + A+ + + P+ L + LKER+ L +
Sbjct: 74 MLL-----LGVLNTVTMFAYFSAIRHMGIPVAVLLLYTAPIYVTLLSPLLLKERITLLDM 128
Query: 149 IAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+A L I +L+ G + + + + E +
Sbjct: 129 LALTLSISGILLAINPLSALGSATPEDGNYITGVLLGLVSGLSYGCSIMTMNYLKESYPP 188
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ A+ V+ F + L + + ++ ++ G+ R K T
Sbjct: 189 VEEMFWSTAVSLVLLLPFGLSVTGPVLLGNLKLLIPLGVIASALASLLYFRGLARIKAQT 248
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ P+ I +L +P+ + +++ + T I
Sbjct: 249 AAVLSLIEPVSSICFCCILLGEPLQSNTVGGCLLILAGAALIGSSTSIQQ 298
>gi|116053952|ref|YP_788390.1| hypothetical protein PA14_02970 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115589173|gb|ABJ15188.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
Length = 292
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 93/296 (31%), Gaps = 5/296 (1%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA 70
+ S AS T+ G L + A L+ ++FL + ++ + A
Sbjct: 2 NASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPIVMVVWARYLVHTLLMVA 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ GL++++ + L T L G L + F+ P++
Sbjct: 62 VFVPRNGLAVIRTRRPLMQLARALCLIGTSLFFTTG-----LRYLPLAEATAVNFLAPLL 116
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L LKE+++ Q +A L + +L + G A+ SA CF +
Sbjct: 117 VTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLT 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ +F + + ++ L +I G + +
Sbjct: 177 RMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQA 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A +T+ Y + + + + D + ++ + +V
Sbjct: 237 FRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWALLGILVICASGLVVAWRRGR 292
>gi|315652755|ref|ZP_07905729.1| DMT superfamily drug/metabolite transporter [Eubacterium saburreum
DSM 3986]
gi|315484957|gb|EFU75365.1| DMT superfamily drug/metabolite transporter [Eubacterium saburreum
DSM 3986]
Length = 287
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 94/284 (33%), Gaps = 13/284 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +G + + I+WG + + L ++S E++S+R L + + +
Sbjct: 1 MKKTLGIIGLVIVTIIWGGGFVASDIALNELSPFEIMSYRFLIASIIMGVFAWRNLKTIR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ L + I L +F V+ F+
Sbjct: 61 --------KDEIIYGSILGIALFSGFALQIIGLKYTTPSNNAFLTATNVVMVPFIAYFIG 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA----YCFARKTIPVGSSEG 195
++ LN II + ++ + I++L S + + + + A + I
Sbjct: 113 RKNLNKADIIGSFTALIGVGILSLQSNFSISAGDLFTLFCALGFAFQIYLTGIFGKKIRP 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + ++ FSG + L + + + + + + + K
Sbjct: 173 SILNFLQMFTAFCLSIIGLLFSGSINLSLSKQGFSAIIYLGVVSTALCYFLQTAAQKHVD 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I+ + + S+ +L + + I +++ A+++
Sbjct: 233 ETKSAIILSMEAVFGTLFSIILLGEKPNLKMVIGGIMILSAVLI 276
>gi|209965557|ref|YP_002298472.1| integral membrane protein, putative [Rhodospirillum centenum SW]
gi|209959023|gb|ACI99659.1| integral membrane protein, putative [Rhodospirillum centenum SW]
Length = 303
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 84/285 (29%), Gaps = 6/285 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G A+ L+ + + L L +VI ++SL V G L+ L+
Sbjct: 22 RGIALAVTAFALFSGLDVIVKLLTARYALPQVIFLNAVFSLGPVLAYAAVRGGVLASLRT 81
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ A +A F P+I L LKE++
Sbjct: 82 RRLR-----LHGLRALCGVCSGFCTFFAYSRMPIADVYALAFAAPMIMTALSVPVLKEQV 136
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A + +L+M G + A+A A+ ++ I G +
Sbjct: 137 GWRRWTAVAVGFGGVLLMLRPGGGMVDVGALAALAGAFFYSSGMIISRLMRGTETSVSFA 196
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + + D G L I ++A + V +
Sbjct: 197 FYSAAAAMAVTAGMLPFFWQTPTLADLGLSALGGTLGGAALVILLTAFRQAPTAVVAPFQ 256
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
YT L + I D + GIV+ + + L +
Sbjct: 257 YTQLLWGVFYGWVIFGHLPDAWLFLGGGIVIGSGLYILHRETRRT 301
>gi|188580064|ref|YP_001923509.1| hypothetical protein Mpop_0796 [Methylobacterium populi BJ001]
gi|179343562|gb|ACB78974.1| protein of unknown function DUF6 transmembrane [Methylobacterium
populi BJ001]
Length = 339
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 86/297 (28%), Gaps = 9/297 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + A + + + L V L R ++ V +
Sbjct: 32 RRLAGIALMCVAPVFFASLDATGKVLAGTGVDPLLTTFMRYAVNVALVSAFL------NP 85
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + + + +L AL + Q T F P+ L L
Sbjct: 86 VTRPGVARSRRLPLQILRSLLLFGSTACNFLALRSLQLAETISIQFAAPLTVALLAGPLL 145
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++ A + +L++ + + + C+A I +
Sbjct: 146 GEWSSRMRLAAVAAGFVGVLVIVRPDALMAKPAILFSLGAMLCYAVYVIVTRKLAAYDST 205
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + + + LI GL + + RA S
Sbjct: 206 ATTVFYTGLGGLAVMSPLLPWIWTAPASGTVWALLIAVGLFGTIGHWLLVLAHARAPASL 265
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ YT L ++ + + GI+V + + L + + +
Sbjct: 266 LAPFIYTQILWSVLLGYLLFGDVPSAWTMLGAGIIVASGLALLAEDALMRRPPRRNE 322
>gi|224477842|ref|YP_002635448.1| putative transport protein [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222422449|emb|CAL29263.1| putative transport protein [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 304
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 89/292 (30%), Gaps = 14/292 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
L + WGI L+ Q L + +V++ R + + + ++
Sbjct: 2 QQLLKWRPYILTIIGAACWGIIGLFIQPLYNRGFTAWDVVTIRGVLTFIFLIVFMLVS-- 59
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + L + P+ L
Sbjct: 60 --NPKSLKSRWQDHFYFAGAGILSMVFFNYLYFEIFSQSSLSLAVTLLYTGPIFVTILSR 117
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTI 188
+F KE LN +IIA +L I + S +++ ++ +
Sbjct: 118 IFFKESLNSNKIIALILSITGCGFVVGLLPSFKVEVSIKIIVTGILSGVCYSLYTILTKP 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I +LF ++++ F + + + +++
Sbjct: 178 VTKRYSALTITTYNFLYTSLFMIIFSKTPSKIQKFAHPDVIGASIGLAFISTVMAYILYT 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
G+K + S I+ P++ I+ V L ++T + + V+ A ++
Sbjct: 238 AGLKHLEASKASILATLEPIVAILCGVIFLGDILNTWQILGIITVMCATIIV 289
>gi|197122080|ref|YP_002134031.1| hypothetical protein AnaeK_1673 [Anaeromyxobacter sp. K]
gi|196171929|gb|ACG72902.1| protein of unknown function DUF6 transmembrane [Anaeromyxobacter
sp. K]
Length = 324
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 82/287 (28%), Gaps = 2/287 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G + +LWGI L + + +S ++ R + ++ +L
Sbjct: 16 TRRGWILFVALCVLWGIPYLLIKVAVRDLSPASLVFLRTAAGAVLLLPFVLVRGNLRPVL 75
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +L + + L +
Sbjct: 76 ARWRPIALFTFGEMAVPWLLLADAERHVTSSLAGLVIAATPLVGALASRLSAGHEPLGAR 135
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ L + A ++ L L + + LA+ V A + +
Sbjct: 136 RLSGLAVGLAGVVALLGLDLGRGDARAVAELAVVVVGYALAPRIVARSLSDLPALDVVAV 195
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
LA+ AL Y + G + + L + F +F I +
Sbjct: 196 SLAMCALAYAPF-GIAQLPGAWPPAEALGAVAGLGVLCTALAFTLFFQLIAEVGPVRATV 254
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ Y P + + + V +L +P + F +++ + +
Sbjct: 255 VAYVNPAVAVAAGVTLLGEPFTVGTAVGFALILGGSWLATSGAARRA 301
>gi|15595436|ref|NP_248930.1| hypothetical protein PA0239 [Pseudomonas aeruginosa PAO1]
gi|107099228|ref|ZP_01363146.1| hypothetical protein PaerPA_01000239 [Pseudomonas aeruginosa PACS2]
gi|218888980|ref|YP_002437844.1| putative permease [Pseudomonas aeruginosa LESB58]
gi|254237524|ref|ZP_04930847.1| hypothetical protein PACG_03603 [Pseudomonas aeruginosa C3719]
gi|254243339|ref|ZP_04936661.1| hypothetical protein PA2G_04150 [Pseudomonas aeruginosa 2192]
gi|9946078|gb|AAG03628.1|AE004462_1 hypothetical protein PA0239 [Pseudomonas aeruginosa PAO1]
gi|126169455|gb|EAZ54966.1| hypothetical protein PACG_03603 [Pseudomonas aeruginosa C3719]
gi|126196717|gb|EAZ60780.1| hypothetical protein PA2G_04150 [Pseudomonas aeruginosa 2192]
gi|218769203|emb|CAW24963.1| putative permease [Pseudomonas aeruginosa LESB58]
Length = 292
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 93/296 (31%), Gaps = 5/296 (1%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA 70
+ S AS T+ G L + A L+ ++FL + ++ + A
Sbjct: 2 NASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPIVMVVWARYLVHTLLMVA 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ GL++++ + L T L G L + F+ P++
Sbjct: 62 VFVPRNGLAVIRSRRPLMQLARALCLIGTSLFFTTG-----LRYLPLAEATAVNFLAPLL 116
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L LKE+++ Q +A L + +L + G A+ SA CF +
Sbjct: 117 VTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLT 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ +F + + ++ L +I G + +
Sbjct: 177 RMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQA 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A +T+ Y + + + + D + ++ + +V
Sbjct: 237 FRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWALLGILVICASGLVVAWRRGR 292
>gi|294102590|ref|YP_003554448.1| protein of unknown function DUF6 transmembrane [Aminobacterium
colombiense DSM 12261]
gi|293617570|gb|ADE57724.1| protein of unknown function DUF6 transmembrane [Aminobacterium
colombiense DSM 12261]
Length = 302
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 92/295 (31%), Gaps = 10/295 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ N S M G+L V A + WG + F S V + R+ +F ++
Sbjct: 1 MRGGNISHQEMAGSLLVLFAGVFWGTSGTAQAFAPSGASPFTVGAIRITGGGIFLFILLI 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G L L + + +T T + P+ +
Sbjct: 61 FRKGLSWLKGGCPLKVLLPASLGMAGFQFFFF----VAIKMTGVAVGTMVAVGGAPMWAG 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKT 187
LG + KE + + L ++ ++++ +P + +A + +S
Sbjct: 117 LLGYIIYKEPPEKMWYFSTSLAVIGCVLLSAGGEGLQTSLPGIFMAFSAAFSYALCGMGL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ G + +++ F + + L + + + +F
Sbjct: 177 KGLRFLYGPIESAALTLCGGSLFLLPLLFFFDVSWLTQWRGVGVALHLGIVATALPYSLF 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
S GI ++ + T PL + V +L + + + + + L
Sbjct: 237 SMGIGIVPVAKAYTLTLTEPLTACILGVLLLGERLSFTSIAGIFFIFSGLALLSL 291
>gi|224371977|ref|YP_002606143.1| integral membrane protein [Desulfobacterium autotrophicum HRM2]
gi|223694696|gb|ACN17979.1| integral membrane protein [Desulfobacterium autotrophicum HRM2]
Length = 292
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 94/289 (32%), Gaps = 15/289 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G +++ A LWG+ + E V+ LEV R + ++ L
Sbjct: 10 KLGYIYILAAATLWGVLGPLGKMAFQEGVAPLEVAFWR------AMLAWFLFAVQALFQR 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +K G+ +F + + +G + A+ + S + P L +FL E
Sbjct: 64 RVAVKPRDLPGLALFGFLCVTLFFGSYQIAVEKGGAAMASVLLYTAPAWVFLLSRLFLNE 123
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSE 194
R+N + +A +L + +++++ + + L + SA G
Sbjct: 124 RVNLKKTVALVLTLAGVVLVSRNQQVQPLGITGGAGMSAVLFGLLSGFCYSLYYIFGKHF 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
VL + L + + + G++R
Sbjct: 184 SDKYSASVLFLYTLPFGAVCLLPWFSFAEKSATAWVALGSIAVFSTFGAYHFYYAGLRRI 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ I+ P++ + + + +++ A+V+ +
Sbjct: 244 EAGRASIIATAEPVVAALVAWCWWGESFTVYGYFGSVLILAAVVLMIRD 292
Score = 37.2 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 11/110 (10%), Positives = 38/110 (34%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E+ +++ + + L + F + +++ +
Sbjct: 41 LEVAFWRAMLAWFLFAVQALFQRRVAVKPRDLPGLALFGFLCVTLFFGSYQIAVEKGGAA 100
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ YTAP + + S L + ++ +T+ + + +V+ +
Sbjct: 101 MASVLLYTAPAWVFLLSRLFLNERVNLKKTVALVLTLAGVVLVSRNQQVQ 150
>gi|167749677|ref|ZP_02421804.1| hypothetical protein EUBSIR_00635 [Eubacterium siraeum DSM 15702]
gi|167657300|gb|EDS01430.1| hypothetical protein EUBSIR_00635 [Eubacterium siraeum DSM 15702]
Length = 296
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 92/292 (31%), Gaps = 8/292 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ P G L + + + + + + ++ R L + ++ G
Sbjct: 6 SKISPKHKGVLCIISSAFCFAFMGAFVRLAGDLPSVQKSFFRNLVAFIFAAVILIRQKGS 65
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +G L+ + + YA+ + ++P + ++
Sbjct: 66 F-----LPQKKSNIGALLIRSVCGTLGILCNFYAVDHLALSDAAMLNKMSPFFVIVFSAL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL+ER N +Q ++ L++ S L + + + A G
Sbjct: 121 FLRERTNLVQTFGVIVAFAGSLLIIKPSLANLELVPSLLGFLGGMGAGAAYTAVRWLGIR 180
Query: 198 IE--MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E ++ + F + F + L L+G GL + + K A
Sbjct: 181 GEKGPYIVFFFSGFSCLVTLPFLLFDFHVMTWQQWLVLLGAGLAAAGGQFSITAAYKFAP 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYLLPTVI 306
+ + +Y+ + + + Q D I + ++ + + ++L
Sbjct: 241 AKEISVYDYSQIIFSALLGFILFSQLPDIWSFIGYVVICGVGVAMFLYNNRR 292
>gi|260777087|ref|ZP_05885981.1| permease [Vibrio coralliilyticus ATCC BAA-450]
gi|260606753|gb|EEX33027.1| permease [Vibrio coralliilyticus ATCC BAA-450]
Length = 299
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 99/297 (33%), Gaps = 16/297 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F+ + + + + +++ + V E+++ R L SL + + K
Sbjct: 11 GVRFMLLSALGFALMSACVKYVSNYGIPVFEIVAARALVSLVISYLDV--------KRKR 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L+ + V Y++ T + +V PV + LG +FLKER+
Sbjct: 63 ISVWGHNKPLLMLRGAVGTVALMCVYYSVTTLPLAEATILQYVHPVFTALLGVLFLKERI 122
Query: 144 NHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+I L ++ L +M S L + A+ + + V
Sbjct: 123 QFSTMICIALCLVGLGVMVQPSMQTGSSSDLPLFSVMMALLGAFGSSIAYVIVRRLSQTE 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L + + G+ F ++ TL LI G+ + ++
Sbjct: 183 DSSVIIFYFPLMALPTSMMLIGDDFVWPSLFLTLMLILVGVFTQIGQYGLTKAMQTQAAG 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y + + ++ + + ++VI ++ + + + K
Sbjct: 243 KASAYSYVQIVFSALLGAWVFNEIPSYWTYLGGSLIVIGALINVFGQHLKPPFQRAK 299
>gi|167625550|ref|YP_001675844.1| hypothetical protein Shal_3644 [Shewanella halifaxensis HAW-EB4]
gi|167355572|gb|ABZ78185.1| protein of unknown function DUF6 transmembrane [Shewanella
halifaxensis HAW-EB4]
Length = 292
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 117/298 (39%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L + A +L+G T L+++ + +S L++ R + + + + LSL
Sbjct: 3 NKKTGLLELHFAVLLFGGTALFSKLI-PLSALDITVLRCVVAATVLALIVKLSKQRLSL- 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + I+++HW + ++ + ++F PV++V + + K
Sbjct: 61 ----NAGKDYLIAIALGIIISLHWVTYFASMQLSSVAIGMIAFFTYPVMTVLVEPIVTKT 116
Query: 142 RLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+L +I+ +++++ + ++ L +AI + +A AR + +
Sbjct: 117 KLKLSDVISGIVVLIGVSLLIPEASLGNDVTLGIAIGILSAALFTARNLLHKRYFTAYSG 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + ++ + E + L ++ + + +F+ ++ T
Sbjct: 177 KQAMFYQTSVAVFFLAPWLNVELSSIEQNVWWLIILLGVVFTAVPHALFTSALRLLSAKT 236
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
VG++ P + ++ +L + + I +VV + T N N+ KKS
Sbjct: 237 VGLVSCLQPFYGAMLALMLLGEELALKTVIGGTLVVATAL---FETQQNHKLNRAKKS 291
>gi|89893476|ref|YP_516963.1| hypothetical protein DSY0730 [Desulfitobacterium hafniense Y51]
gi|89332924|dbj|BAE82519.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 295
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 91/286 (31%), Gaps = 4/286 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLE--VISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + A + + P++ ++ V + ++ R L + + F ++ GL + K
Sbjct: 4 GYVLIVLAALGFAALPIFIKYGYNVGLTTEVILFLRFLIASVLLSFIMLVNKKGLHMNKS 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L G++ F ++ + A +T T V +F V L + L
Sbjct: 64 DLPKLVVQGLVFFGSSYCYTLAIKHMSASVTNILLYTYPLMVVLMATMIFKEKVSLVKAL 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--WSAYCFARKTIPVGSSEGFFIEMC 201
L L+++ ++ + H L L + + A + E I
Sbjct: 124 TLLLSFLGCLMVIDVIHTSTHQISMLGILYGIGSAIFYAIYNINGQYLSKTLEPVTISTY 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ +V + L L + GI S I
Sbjct: 184 TSVVCLFATMVIYPPVNIFAGHSFQAMWIVGLGTAILSTIIPLFCYQKGISLLGASQASI 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ P++ V + IL + + ++ +++ ++ L
Sbjct: 244 LSNIEPVIATVLAFLILGETLSIIQLSGAFLIISGGLLLKLDKGKQ 289
>gi|241204339|ref|YP_002975435.1| hypothetical protein Rleg_1608 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858229|gb|ACS55896.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 293
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 82/295 (27%), Gaps = 5/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +FV A ++ + ++ L + V R GG+
Sbjct: 2 TSKTQGYIFVLLALTIFSLQDAISKHLATAYPPIFVTMIRYWAFALFTIILASKMRGGIK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T + + V +LAV I + + TP++ L L
Sbjct: 62 ATARTKR----PFLQVTRGVLLAVQVVLAITCFAVIGLARSQAIFSATPILIALLAMPIL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ + A + +L++ G + S + FA I
Sbjct: 118 GERVGWRRWAAIGAGLFGVLLILKPEGEFFDLKLLLAVLSCFNFAFYVIATRLVSRDDSS 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M + V G ++ + D ++ + + + V
Sbjct: 178 MTSFFYTGVVGGVTMTLVGPFYWSWMSPGDWGWMALVCVTSISSHYFLIRAYDILDAAAV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y + + V + I + + IVV A + + + +
Sbjct: 238 QPLTYLSLVYASVIGMVIYDETLSLNMIAGSIIVVAAGIFTVWREHVVGRRAAAA 292
>gi|163850303|ref|YP_001638346.1| hypothetical protein Mext_0870 [Methylobacterium extorquens PA1]
gi|163661908|gb|ABY29275.1| protein of unknown function DUF6 transmembrane [Methylobacterium
extorquens PA1]
Length = 347
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 87/297 (29%), Gaps = 10/297 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + A + + + L V L R ++ V I
Sbjct: 38 RRLVGIALMCIAPVFFASLDATGKVLAGAGVDPLLTTFMRYAVNVALVTALI------NP 91
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + + + + +L AL + Q T F P+ L L
Sbjct: 92 VTRPGVAHSRRLPLQILRSLLLFGSTACNFLALRSLQLAETISIQFAAPLTVALLAGPLL 151
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++ A + +L++ + + + C+A I
Sbjct: 152 GEWSSRMRLAAVATGFVGVLVIVRPDALAAKPAILFSLGAMLCYAIYVIVTRKLAAHDST 211
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + + + L+ GL + + RA S
Sbjct: 212 ATTVFYTGLGGLAVMSPLLPWIWTAPASGTVWALLVAVGLFGTIGHWLLVLAHARAPASL 271
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKTK 314
+ YT L ++ + + GI+V + + ++ + +
Sbjct: 272 LAPFIYTQILWSVLLGYLLFGDVPSAWTMLGAGIIVASGLALLSEDALMRRHARRRQ 328
>gi|94500510|ref|ZP_01307041.1| hypothetical protein RED65_15608 [Oceanobacter sp. RED65]
gi|94427300|gb|EAT12279.1| hypothetical protein RED65_15608 [Oceanobacter sp. RED65]
Length = 292
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/280 (11%), Positives = 86/280 (30%), Gaps = 14/280 (5%)
Query: 29 FVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A +WG T + + + + + + R+ ++ I Y G +
Sbjct: 1 MLIFAMAVWGSTFVAMKLVVTGMPAMVAVFIRMCLAVAAFAVLIKYVRKG-----VVYRK 55
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+++ + +++ F AL + P++ ERL Q
Sbjct: 56 GDWRYLVLMALFEPCLYFLFESQALQYTSAGQAGMITSLFPILIAVSAFFAFGERLYRRQ 115
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + ++ ++ MTL + +A +A + + S
Sbjct: 116 WLGLFIAVVGVIWMTLAGEESDQAPNPLLGNLLELAAMGAAVGYTLLVKHLTSRYPALFL 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A + + + +G L + + +F+Y + +
Sbjct: 176 TAMQACVGVVFFLPFALDSQWPDSIGVDMWLLLIYLGVGATLGAYGLFNYALTHVDATVA 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P ++ SV L I+ + + +V + + +
Sbjct: 236 AGYVNLIPAFAVLFSVVFLGDEINLWQWLAIALVFVGVYL 275
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 27/77 (35%)
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
++ F S ++ G++ P+L+ VS+ F + + +
Sbjct: 57 DWRYLVLMALFEPCLYFLFESQALQYTSAGQAGMITSLFPILIAVSAFFAFGERLYRRQW 116
Query: 288 IVFGIVVIAMVVYLLPT 304
+ I V+ ++ L
Sbjct: 117 LGLFIAVVGVIWMTLAG 133
>gi|288556840|ref|YP_003428775.1| drug/metabolite transporter (DMT) superfamily permease [Bacillus
pseudofirmus OF4]
gi|288548000|gb|ADC51883.1| Permease of the drug/metabolite transporter (DMT) superfamily
protein [Bacillus pseudofirmus OF4]
Length = 307
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A WG + +F +E + R L + +F + +F
Sbjct: 12 MLTLATATWGSAFIAGKFAIESFEPATIAFLRFLGAAILLFPIMWFFEKNRPKPTI---- 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ T +A++ F A +S P++ V L +FLKE + Q
Sbjct: 68 KDWGMFALLGLTGIAIYNICFFLASKHAPVIKSSLFIAANPMLIVLLSGLFLKEVITKKQ 127
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEGFF 197
II L + ++++ +++ AV A + +
Sbjct: 128 IIGLFLALTGVVLIVTEGNAGVITQFQFEMIDLVLLGAVITWALYSVLGRVVLKKYSPIV 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+A +F + ++ L+ F ++ YGI++
Sbjct: 188 STTYAVAFGTVFLLPFSLVEQPWNAIGTATPAAWLSIAHMSVLVTVVSFILYYYGIQQIG 247
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ I PL ++ + L + I V+ + V + +
Sbjct: 248 AARASIFINVMPLSAVIMATIFLGETFTASSMIGALFVLSGVYVGTYVHKKRIKRLRHA 306
>gi|221211647|ref|ZP_03584626.1| putative membrane protein [Burkholderia multivorans CGD1]
gi|221169008|gb|EEE01476.1| putative membrane protein [Burkholderia multivorans CGD1]
Length = 309
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 88/291 (30%), Gaps = 16/291 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L+V + +G ++ ++ V VL ++ R +
Sbjct: 12 LQGALYVALSAAAFGAMAIFGRYAYAGGVDVLGLLIVRFAIGGTVLAAIA------WRRG 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ A + AL Q L + ++ P L + +L E
Sbjct: 66 VVWPRGRALMPLVAMGALGYVGQSFCYFTALRHAQASLVALLLYLYPAFVTLLAAWWLGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL + +A +L + +M +A+A+ + ++ G
Sbjct: 126 RLTRAKGVALVLCVAGSALMVGGGHGEPFGIALALGAAVVYSLYIVGGTKATRGVDPLAT 185
Query: 202 VLAIPA--------LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I + V F + L + F G++R
Sbjct: 186 TAIICVSATAALVLIALVRTVAFDAPPRWPATAGGWAAMLAIALVSTVAAMLAFFAGLER 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ P++ + + + + + ++ ++ A++ +
Sbjct: 246 LGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVLALVRAG 296
>gi|163737889|ref|ZP_02145305.1| membrane protein [Phaeobacter gallaeciensis BS107]
gi|161388505|gb|EDQ12858.1| membrane protein [Phaeobacter gallaeciensis BS107]
Length = 335
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 95/280 (33%), Gaps = 1/280 (0%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
G++ + + V E + R +++P + + LK T + ++ +
Sbjct: 50 GLSAIIKATSDVVPAGEAVFFRSFFAIPVILIWLTLRGQLPRGLKTTRPGGHFLRGILGT 109
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI-IAALLIIL 156
+ G + L + F + +V LG R++ + I + +L++L
Sbjct: 110 TAMGMTFMGLGMLPLPEVTAIGYATPIFTLILAAVLLGERIRLIRISAVTIGLIGVLVML 169
Query: 157 SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF 216
+ + + G AI + + I + ++ +L + +
Sbjct: 170 WPRLGSGNLGDTATLGAILILIATVARGLVQIHIRRMVMTEHTAAIVFYFSLTASILSLC 229
Query: 217 SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVF 276
+ + + LIG GL+ + + + A S + +Y++ L I+
Sbjct: 230 TLPFGWVWPDPTTLALLIGAGLVGGVAQILVTSSYRFAPASMLAPYDYSSMLFAILLGYI 289
Query: 277 ILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ V I G+V+ V+ + + +S
Sbjct: 290 WFNELPTLVMLIGAGLVIAGNVLVIWRESRLGLERGKARS 329
>gi|21232967|ref|NP_638884.1| hypothetical protein XCC3538 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66766960|ref|YP_241722.1| hypothetical protein XC_0622 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21114808|gb|AAM42808.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572292|gb|AAY47702.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 294
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 52/295 (17%), Positives = 95/295 (32%), Gaps = 4/295 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L F Y + I+ + + LE + ++ VL + V F
Sbjct: 2 RSMLKGVLLGFACYAAYSISDAFVKLLEG----TLPAYEVLCLGALLMLVAVPFLKKPED 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L K + + A A+ + A T F+ P+ L VFLK
Sbjct: 58 RLRELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVVFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + A ++ + +LI+ L +A A I + + +
Sbjct: 118 EEVRWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVITLRMAGHSEKRL 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + +V F + L GYGLL Y + A +S V
Sbjct: 178 TLYGAGVIGPLVMGAILMLPTFVWPTLYQWGLLAGYGLLAGLAAICLMYATRMAPVSVVA 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 PTQYSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 292
>gi|225873601|ref|YP_002755060.1| membrane protein [Acidobacterium capsulatum ATCC 51196]
gi|225793408|gb|ACO33498.1| membrane protein [Acidobacterium capsulatum ATCC 51196]
Length = 299
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 83/299 (27%), Gaps = 24/299 (8%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++G A LWG + + L ++ V ++ +R L++ G+ + +
Sbjct: 1 MTRVLGYGACALAGCLWGTGFYFGKIALTELPVGHMVLYRFLFACVGLLPVVRWPRFTRR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+L S + V + Y L S PVI +F
Sbjct: 61 A---------WAWLLTASFVGIPVQFLVQFYGLSMTTVSHASLMVGTMPVILAVGAWLFA 111
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL--------------AIAVTWSAYCFAR 185
E+L+ +A + ++ L + +
Sbjct: 112 GEKLDWKGWLALAGSTTGVALIVLGGRHGAAGGKGPSLAGDLLVVLAMVFALGWILVNQK 171
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
S + + L V L +
Sbjct: 172 LMREGHSPLSVTVWGLLTGTAMLAVWVVWRQGMPPVHGLSGQVWFALAASGLACTAATTL 231
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++++G+ R S G+ P L + V +L + + +++ A VV +
Sbjct: 232 LWNWGMHRVPASRAGVFLNIEPALGSILGVELLGDRLGPGAWLGGALIITAAVVLTMTG 290
Score = 38.7 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 34/131 (25%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
A C G + + + + + L
Sbjct: 8 GACALAGCLWGTGFYFGKIALTELPVGHMVLYRFLFACVGLLPVVRWPRFTRRAWAWLLT 67
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ F + YG+ +S +M T P+++ V + + +D +
Sbjct: 68 ASFVGIPVQFLVQFYGLSMTTVSHASLMVGTMPVILAVGAWLFAGEKLDWKGWLALAGST 127
Query: 295 IAMVVYLLPTV 305
+ + +L
Sbjct: 128 TGVALIVLGGR 138
>gi|77464437|ref|YP_353941.1| RhaT family transporter [Rhodobacter sphaeroides 2.4.1]
gi|126463277|ref|YP_001044391.1| hypothetical protein Rsph17029_2517 [Rhodobacter sphaeroides ATCC
17029]
gi|221640328|ref|YP_002526590.1| hypothetical protein RSKD131_2229 [Rhodobacter sphaeroides KD131]
gi|332559326|ref|ZP_08413648.1| hypothetical protein RSWS8N_09725 [Rhodobacter sphaeroides WS8N]
gi|77388855|gb|ABA80040.1| Putative transporter, RhaT family, DMT superfamily [Rhodobacter
sphaeroides 2.4.1]
gi|126104941|gb|ABN77619.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17029]
gi|221161109|gb|ACM02089.1| Hypothetical Protein RSKD131_2229 [Rhodobacter sphaeroides KD131]
gi|332277038|gb|EGJ22353.1| hypothetical protein RSWS8N_09725 [Rhodobacter sphaeroides WS8N]
Length = 317
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 90/298 (30%), Gaps = 8/298 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L A+ ++ + + L + ++++ L P ++
Sbjct: 1 MAKSNTRGALLALLAFAIYATHDVVVKVLGRDYTAVQILFFATLLGFPLASMMLM----- 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
D P+ ++ + YA T F P++ L
Sbjct: 56 -RDRADGNLRPRHPWWVLLRTCCIVTTGLCAFYAFSVLPLAQTYAILFTMPLLVTLLAIP 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E + + A +L +LI+ PL A +A + ++ V
Sbjct: 115 LLGETIGLHRGAAIATGLLGVLIVLRPGAEPLSLGHAAALLAAVTSSLGSVIVRKIGQDE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ +L P + G + + + + + + + A+
Sbjct: 175 RSVVLLLYPMVANFFVLGAALPFVYRPMPVEHLGMMGIIAAFSFVAMLLTITAYRMAEAV 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKTK 314
V M+Y+ + + I + D + G+++ + + + N +N+
Sbjct: 235 IVAPMQYSQMVWAAIFGWLIFGERSDVWTWVGAGVIIASGLYIVGRESRRNVSENRPA 292
>gi|241554216|ref|YP_002979429.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240863522|gb|ACS61184.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 301
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 93/292 (31%), Gaps = 5/292 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
AS G + A + W + +Y++ L V I+ R L+ + ++ GG+
Sbjct: 11 ASSEHEKGVFLIVAATLAWSASGVYSRLLTT-DVWTAIAWRSLFGGLFLLIPCLFLEGGI 69
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + G FI AL + Y P I+ LG V
Sbjct: 70 S---RQQWRFIFHPSSLAMIACQTFSQGCFIGALYMTTVANVTMIYATAPFIAAMLGWVI 126
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L+ER++ +IA + +L + ++ S I + + + + + +
Sbjct: 127 LRERVSRRTLIAGGISLLGVAVIV-ASSIGGGTGWGDLLALGMTASFALVIIIPRISPDV 185
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + F + G L + S +F G KR +
Sbjct: 186 PSLPPTVVSAFLTLALFAPFGSVGSLDLHNWIVLAAFGATNFSLALVLFLAGAKRMPPAE 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ +L + + I++ A++ + V S +
Sbjct: 246 AALIGTMEIVLTPFWVWLLFSEEPPVATFFGGAIILGAVIWHTAIDVSRSRR 297
>gi|39937359|ref|NP_949635.1| DMT family permease [Rhodopseudomonas palustris CGA009]
gi|192293139|ref|YP_001993744.1| hypothetical protein Rpal_4778 [Rhodopseudomonas palustris TIE-1]
gi|39651217|emb|CAE29740.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Rhodopseudomonas palustris CGA009]
gi|192286888|gb|ACF03269.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris TIE-1]
Length = 309
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 80/285 (28%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + + + R W+ + A + ++ K
Sbjct: 21 YLLLSLTSLFWAGNAIVGRAIAGHFPPVTLSFLR--WTCAFLIVAPFAWRHLIADWKVIR 78
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + ++ AL P+ + L+ RL
Sbjct: 79 RHLPLMMSVSIIG--ISTFNTLQYTALQYTSALNVLLLQSTAPLFVALWALIVLRMRLTL 136
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q I ++ ++++ LH I +L + ++ Y + P +
Sbjct: 137 TQAIGIGSSMIGVVVIILHGNIAELAAIDLNRGDVLFVCALASFGLYTTLTQKRPPMHAL 196
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F L + S + + ++ G++
Sbjct: 197 SFLGFTFGCGALFLIPLEIWELSTTPLPAFDWANLGALAYVAVFPSILAYLCYNRGVRLI 256
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ L + + + +V+ +V+
Sbjct: 257 GANRSAPFFHLVPVFGSAMAILFLGEQPHLYHAVGYALVLTGVVI 301
>gi|225028895|ref|ZP_03718087.1| hypothetical protein EUBHAL_03184 [Eubacterium hallii DSM 3353]
gi|224953779|gb|EEG34988.1| hypothetical protein EUBHAL_03184 [Eubacterium hallii DSM 3353]
Length = 314
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 106/306 (34%), Gaps = 11/306 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
A + GT F WG++ + + L ++ +++ R+++ + +
Sbjct: 10 AMNAKVKGTAFALFGGACWGLSSVVGKLLFDMRGMNAEWLVTARLVFGGFIMLCFAAFQK 69
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + K + A M++F+A + + + + + +PV+ + L
Sbjct: 70 KG-EIFKIWKEKKTAFSMILFAALGMLACQLTYFLCVQYSNPATATVLQYTSPVMIMLLC 128
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTI 188
++ + II + +++ + +M+ H I L+++ I + + +
Sbjct: 129 LFLDRKLPRIIDIIVLIAVVVGVFLMSTHGNIHSLAISQKALILGITTAITVVFYTVWPV 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + + ++ + TL I F +
Sbjct: 189 RLLREYGSTLVIGWGMFIGGIMLMPFSKFWAPPGRWDWVTITLVAIVVVFGTIVSFSCYL 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + PL+ + ++F+L Q + ++++++ + VI
Sbjct: 249 KGVMYLGPVKSSLFACMEPLVSTILTIFLLHQAFVAADIVGIALIIVSVTSLAVNDVIKE 308
Query: 309 GKNKTK 314
+ K K
Sbjct: 309 AREKEK 314
>gi|207725278|ref|YP_002255674.1| hypothetical protein RSMK00173 [Ralstonia solanacearum MolK2]
gi|206590512|emb|CAQ37474.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 312
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 88/287 (30%), Gaps = 14/287 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G L + + +G ++T + + + +++ R + + + G+
Sbjct: 17 KLLGVLLIGVSAASFGAMAIFTHYAYASGANTVGLLAVRFCLAALALMVVMRVRRIGIPP 76
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G+ A F AL L + ++ P+ L + FL
Sbjct: 77 WSR------VAGLAAMGGIGYAGQSFAFFTALHYAPASLVALLLYLYPMFVTVLAAAFLH 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVGSSE 194
ERL ++A +L + + +G+ S A + +
Sbjct: 131 ERLTPAALVALVLCSVGAGLTVGGAGLAGGSPLGVVLGVAAAVIYSVYITVGARVTRGVD 190
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ Y F L GL F G++R
Sbjct: 191 PIACTTVICTAAAVVYAGLAAAGVPARFPGSVAGWAASLAIAGLSTVIAILAFFAGLQRL 250
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ P++ +V + +L + I + +++ ++
Sbjct: 251 GAAQASMLSTLEPVVTVVLAALLLGESIGAAQMAGGALILAGVLWLT 297
>gi|114564481|ref|YP_751995.1| hypothetical protein Sfri_3320 [Shewanella frigidimarina NCIMB 400]
gi|114335774|gb|ABI73156.1| protein of unknown function DUF6, transmembrane [Shewanella
frigidimarina NCIMB 400]
Length = 290
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 112/287 (39%), Gaps = 9/287 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + A +L+G T L+++ + +S L + R + + + I L L +
Sbjct: 9 GLVELHLAVLLFGGTALFSKLI-PLSALNITFLRCIIAAMVLAAIIKAAKRPLRLQRQQD 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ T++ +HW + A+ + ++F PV++V + + K +L
Sbjct: 68 -----YWAALALGTLVCLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVLIEPLINKTQLKP 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLS---LAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +I+A+ ++ ++++ + + + + + + +A +R + + +
Sbjct: 123 VDVISAIAVLAGVIMLIPEANLNNDTTLGIIVVIISAALFTSRNLLHKRVFSQYSGPHAM 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ + + + L L+ + + +F+ ++ TVG++
Sbjct: 183 FYQTLITLILLSPWQDVAAQHISQTTWGLILLLGIVFTALPHALFTTALRFLSAKTVGLV 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P V ++ IL + + T I I+V + + S
Sbjct: 243 SCLQPFYGAVLALLILDEQLTTPTLIGGTIIVATALFETQQSHQKSR 289
>gi|312116036|ref|YP_004013632.1| hypothetical protein Rvan_3348 [Rhodomicrobium vannielii ATCC
17100]
gi|311221165|gb|ADP72533.1| protein of unknown function DUF6 transmembrane [Rhodomicrobium
vannielii ATCC 17100]
Length = 320
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 85/294 (28%), Gaps = 10/294 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
+ +S ++G F+ A + +FL E + V+E+I R L + + +
Sbjct: 18 QRPSSDRRLVGIGFMLTAVSFFAFLDTSAKFLGTIEHIPVVEIIWVRFLMNAVLIVVMLR 77
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + +L F AL Q TS YF+ P
Sbjct: 78 PRGVMRAAPSKRPGQQILR------SALLLATTAFNFAALQFLQLDQTSTIYFLAPFFVA 131
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L L E + ++ A + ++ +T + S +C + ++
Sbjct: 132 ALAGPLLGEWVGWHRLAAICVGFTGIIFVTKPGFGGIHWAVALALGSVFCHSLYSLWTRY 191
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLNSFVFCIFSYGI 251
F L L V ++ + ++ LL
Sbjct: 192 LARFDAPRTTLVYTPLAGAVIMAPVALWNWQMPPNALAWGILLSMGLLGGMGHWFLILAH 251
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
RA + Y LL+ + D + I+V + + L
Sbjct: 252 DRAPAPVIAPFTYINLLLVTCLGYLVFGDVPDIWTLVGAAIIVASGIYLLFRER 305
>gi|258647284|ref|ZP_05734753.1| putative membrane protein [Prevotella tannerae ATCC 51259]
gi|260852939|gb|EEX72808.1| putative membrane protein [Prevotella tannerae ATCC 51259]
Length = 321
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/301 (10%), Positives = 93/301 (30%), Gaps = 22/301 (7%)
Query: 23 TMMGTLFVFCAYILWGITPL----------YTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ GT+ A I +G+ P + + + L ++ +R + + + ++
Sbjct: 27 ALQGTICALIAAICYGLLPTLVLPMSESNAAAKPEDFMPNLSILFYRFMSAALIIGLVML 86
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + L + L + + + + +F+ P +
Sbjct: 87 IKRKSFRITRGELVTLLYLAFLSDGSALFL------FGGYQYMSTGVATTLHFMYPAFTT 140
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARK 186
L +F E IIA L ++ + +++ S + + A+ ++ Y
Sbjct: 141 ILMMMFYNEARKLSTIIAVTLAVVGVGVLSWQSDGTVDWRGVIIELISALCYALYLIRVN 200
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
V + + ++ A+ ++ + I +
Sbjct: 201 RSRVRDMDALKMTFYIMLFGAMIFMGYALLENKFEMITTQTQLVSLSIMGLVSTVVTNLC 260
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+K + ++ PL + + +P+ T I +++ A+++ +
Sbjct: 261 LIVAVKNIGSTMTSVLGALEPLTAVTLGLIFFNEPLTTSILIGLSLIIPAVIMIIFTRGR 320
Query: 307 N 307
Sbjct: 321 K 321
>gi|25011750|ref|NP_736145.1| hypothetical protein gbs1710 [Streptococcus agalactiae NEM316]
gi|24413290|emb|CAD47369.1| Unknown [Streptococcus agalactiae NEM316]
Length = 304
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 104/300 (34%), Gaps = 10/300 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
GT+ A + WGI+ + Q+L V V + S R+L + + ++ L+
Sbjct: 6 KGTMMTLAAGLAWGISGISGQYLMSHGVHVNLLTSLRLLITGIFLL-SLARSKQKEHLVA 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +L+FS L ++ F+ A+ + ++ P++ + + + ++R
Sbjct: 65 AWKQPKFLKQVLLFSIFGLVLNQYAFLRAIHLTNAGTATVLQYMAPILILSIVCILNRQR 124
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+IIA + IL ++ H L + + + + + G
Sbjct: 125 PTSFEIIAIAMAILGTYMIATHGKLGSLAITPKGLMWGLGSAITYSIYILLPVKLIHEWG 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + + + ++ G+ F + F G+
Sbjct: 185 STIVIGSGMFIGGILFSLVTKAWQYPLQINVMSILAYIGIIGIGTIFAYTFFLKGVSIVG 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ P+ + +V +L + + + + +A+ + +I K K K
Sbjct: 245 AVKGSLLASVEPVSSVFLTVLVLGEIFYPIDLLGMLFIFLAVTLISYKDLIALKKMKRVK 304
>gi|307257092|ref|ZP_07538866.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306864402|gb|EFM96311.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
Length = 297
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 120/294 (40%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L +S + R++ +LP +FFAI
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ ++TI+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KRLKQQPHLILVILITSTIVGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVAFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + Y R+T + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPVYFHIRRTFQLSNIYSFIFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + + N F+ +++ ++ + +G
Sbjct: 183 IFLIPISLYFIW---NTDMDFIYAQNPNIYYFIAVLSVVSGTALLSYTLASTILPFNMLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|296284375|ref|ZP_06862373.1| hypothetical protein CbatJ_12151 [Citromicrobium bathyomarinum
JL354]
Length = 314
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/305 (16%), Positives = 102/305 (33%), Gaps = 9/305 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
+ A + A + + + + V +LE+I R +L +
Sbjct: 1 MDASVAQSRPLTAIGLRLLAAFSLTTLSMLVKLVGEDGVHLLEIIFWRQAVTLLAMIAFA 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
G +L ++ L A++ + F P+ +
Sbjct: 61 AATVGFATLKPVRFRSHAIRSAYGIVGMALV------YGAVIMLPLAEATTINFTAPIWA 114
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-WSAYCFARKTIPV 190
V L + +KER+ + A + +LI+ G P+ L IAV A+ A +I +
Sbjct: 115 VILSMLLMKERIGRYRWSAIAIGFAGILIVAQPGGNPVDPLGIAVGLGGAFMVALTSIQI 174
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ L V + + L L G GL + + +
Sbjct: 175 QDLNKTESPTSIVFWFCLLTVPLLALALPFVAKAHSSETWLLLGGVGLSGAAAQLLLTTS 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ +TV +M+YTA L + + + I ++++A + L+ + K
Sbjct: 235 LRFGSAATVIVMDYTALLWATLYGWQVFDELPVPNTWIGAPLIILAGTIILVREGHLARK 294
Query: 311 NKTKK 315
+ +
Sbjct: 295 ARRAR 299
>gi|237668569|ref|ZP_04528553.1| transporter [Clostridium butyricum E4 str. BoNT E BL5262]
gi|237656917|gb|EEP54473.1| transporter [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 294
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 97/298 (32%), Gaps = 7/298 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N G +F+ + + + + + + + R S+ IV
Sbjct: 4 NKLSNRTKGIIFIIMSAFGFAMMSAFIKLSGDLPSFQKTFFRNSISVIVALTLIV----- 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L+ +T + YA+ + ++P + ++
Sbjct: 59 -KNKGSFFGKKDNQKLLILRSTFGTIGILLNYYAIDRLVLSDANMLNKLSPFFVIIFSAI 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKE++ Q A + L L + S + A+A T A V S G
Sbjct: 118 FLKEKIKPNQFFALAVAFLGALFIIKPSFSFEMIPALAGTLGGISAAAAYTCVRSLGGKE 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ +LF + + +I +LI G+ S ++ K A
Sbjct: 178 KPDTIVFYFSLFSSIVTLPLMLISYKPMSIIQFTYLILAGIFASLGQFGITFAYKFAPGK 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ I +YT + + S+ + D + I + +++ +Y+ K + K
Sbjct: 238 EISIFDYTNIIFSAIISLCLFGVLPDYLSVIGY-LIIFGSSLYMFINNKKLDKEQNNK 294
>gi|157963364|ref|YP_001503398.1| hypothetical protein Spea_3550 [Shewanella pealeana ATCC 700345]
gi|157848364|gb|ABV88863.1| protein of unknown function DUF6 transmembrane [Shewanella pealeana
ATCC 700345]
Length = 292
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 115/296 (38%), Gaps = 9/296 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L + A +L+G T L+++ + +S L++ R + + + + L L
Sbjct: 3 NKKTGLLELHFAVLLFGGTALFSKLI-PLSALDITLLRCVVAAIVLALIVKLSKQRLLL- 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + I+++HW + ++ + ++F PV++V + + K
Sbjct: 61 ----NANKDYFIAIGLGIIVSLHWVTYFASMQLSSVAIGMIAFFTYPVMTVLVEPIVTKT 116
Query: 142 RLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+L +I+ +++++ + ++ L +AI + +A+ AR + +
Sbjct: 117 KLKLADVISGIVVLIGVSLLIPEANLGNDVTLGIAIGILSAAFFTARNLLHKRYFSAYSG 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + ++ + E + L ++ + + +F+ ++ T
Sbjct: 177 KQAMFYQTSVAVFFLAPWLSVEISSIEQNVWWLIILLGVVFTAAPHALFTSALRLLSAKT 236
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
VG++ P + ++ +L + + I +VV + + ++ KT
Sbjct: 237 VGLVSCLQPFYGAMLALILLGEDLALKTVIGGTLVVATALFETQQSHRSNRIKKTA 292
>gi|317121444|ref|YP_004101447.1| hypothetical protein Tmar_0599 [Thermaerobacter marianensis DSM
12885]
gi|315591424|gb|ADU50720.1| protein of unknown function DUF6 transmembrane [Thermaerobacter
marianensis DSM 12885]
Length = 299
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 84/270 (31%), Gaps = 13/270 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G +V A LWG + + + EV+ R + +
Sbjct: 4 RGIAYVLAAASLWGTLGIVARLAYAGGAGPGEVVFFRAAIAFGLALLVA-----WRQGVP 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + + + + + +A+ + + + PV L + L E
Sbjct: 59 LGVPRRQWPLLGAYGTVSVGLFYLSYFWAVRLLPVAVAAVLLYTAPVFVAVLARLLLGEP 118
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
L +++A + + +++++ ++ +A A + + +
Sbjct: 119 LGPRRVLALAVAVAGVVLVSAPDPAAGITWTGVAAGLLAGLTYALYSIFGKLALRDLDPA 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + L I AL + ++ + +++ G++
Sbjct: 179 AVVVYTLGIGALVLLAALPPGRLLAIQWPPAVWGWVVLLGVGPTFLAYRLYTAGLQWVPA 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
ST I+ P++ +L + + +
Sbjct: 239 STAAIVATVEPVVAAGLGWLVLGEALTAGQ 268
Score = 36.8 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 38/122 (31%)
Query: 165 SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL 224
+ + A + + G + A A + + G +
Sbjct: 2 GARGIAYVLAAASLWGTLGIVARLAYAGGAGPGEVVFFRAAIAFGLALLVAWRQGVPLGV 61
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
L + + + + ++ ++ ++ YTAP+ + V + +L +P+
Sbjct: 62 PRRQWPLLGAYGTVSVGLFYLSYFWAVRLLPVAVAAVLLYTAPVFVAVLARLLLGEPLGP 121
Query: 285 VR 286
R
Sbjct: 122 RR 123
>gi|237748384|ref|ZP_04578864.1| permease [Oxalobacter formigenes OXCC13]
gi|229379746|gb|EEO29837.1| permease [Oxalobacter formigenes OXCC13]
Length = 290
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 88/290 (30%), Gaps = 13/290 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + + WG + L + L+ + +I+ R + + L+
Sbjct: 1 MNSRKAEWLMASVALAWGSSYLLMKLGLDGIGPYNLIALRFGIAFFVMSVLFFPRYRLLT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + IL + + + + F T V+ L +
Sbjct: 61 VSTLAKG--------IVMGIILFLIFYGMVNGVNHTTASTAGFLTSTTVVMVPVLECLLK 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL----SLAIAVTWSAYCFARKTIPVGSSEG 195
+ + +I LL + L ++T GI L I + A +
Sbjct: 113 RTLPSKTIVIGTLLAVAGLFLLTAKDGISLDLGAIYCLIGALFYAIYIIVIDKVAKGPDA 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F I + L I +L ++ + L + +++ F + +
Sbjct: 173 FLISIIQLGIASLLGALFMCLLETPSLPQTPLQWGAILGLGLICSAYGFVVQPIAQRYTS 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+G++ P+ + S L + + I ++ A++ L
Sbjct: 233 PEKIGLIFSLEPVFSALLSYIFLHEILGIQGYIGAALIFSAVIFTELSKR 282
>gi|222086537|ref|YP_002545071.1| transporter [Agrobacterium radiobacter K84]
gi|221723985|gb|ACM27141.1| transporter [Agrobacterium radiobacter K84]
Length = 368
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 85/290 (29%), Gaps = 6/290 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A T+ G L F +Y ++ + + L + +V L+ V F
Sbjct: 59 AGHSTLRGVLVAFASYAVFAFSDASIKMLHGTLPSYQVAFIGALFGFAAVPFL-----KR 113
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + A I A F+ P L V
Sbjct: 114 RDDNWVDMVRTSNRPLWILRFACGATGAICSIVAFTKLSMAEAFALLFLLPSFVTILSVV 173
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKE + + A +L + +LI+ L + A + +
Sbjct: 174 FLKEDVRWQRWTAVILGFIGVLIVLRPGFRELSIGHLCAAIGGLAAAIGIVINRALGAKE 233
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ +G + LFL YGLL + + + +
Sbjct: 234 KRISLYGAGLFGTLIVSGLLMLSEVSMPTAWQWLFLASYGLLGAVGNVLLMTAARMVPAN 293
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V +Y+ + I + ID + +++ + ++ L
Sbjct: 294 LVAPPQYSQMIWAIGFGYLLFNDDIDLPMALGIALIIFSGLLTLARERKR 343
Score = 36.0 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 50/203 (24%)
Query: 104 HWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTL 163
S + I L + L + S +
Sbjct: 1 MICQQHPPHRFETIVYFSANRNSAHFIIQLLAATRFSFPPFALLNPMTSITADSKSLAAG 60
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF 223
HS + + +A A + + + + A+ V +
Sbjct: 61 HSTLRGVLVAFASYAVFAFSDASIKMLHGTLPSYQVAFIGALFGFAAVPFLKRRDDNWVD 120
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ + I + + ++ + + P + + SV LK+ +
Sbjct: 121 MVRTSNRPLWILRFACGATGAICSIVAFTKLSMAEAFALLFLLPSFVTILSVVFLKEDVR 180
Query: 284 TVRTIVFGIVVIAMVVYLLPTVI 306
R + I +++ L P
Sbjct: 181 WQRWTAVILGFIGVLIVLRPGFR 203
>gi|168185816|ref|ZP_02620451.1| transporter [Clostridium botulinum C str. Eklund]
gi|169296131|gb|EDS78264.1| transporter [Clostridium botulinum C str. Eklund]
Length = 282
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 105/287 (36%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
L++ + + + + + V+E + R SL F + +G +
Sbjct: 2 NNKTKAVLYMLLSALGFAFMGAMVKLAGNLPVIEKVFFRNFISLFVAFGVLKKATGPILG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ K A +L + L + Y++ + ++ ++P +FLK
Sbjct: 62 KKENQKYLLARALLGLTGMFL------YFYSIDHLKLADSAMLNKLSPFFITLFAIMFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L ++I++ +++ + L++ + A+A SA V +
Sbjct: 116 EELTGMKIVSMIIVFVGALLVIKPQWDLSIIPALAGFLSAAFAGGAYTLVRFLKDRENPS 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +L V+ + +F + L+LI G+ + +Y K A S V
Sbjct: 176 TIVFYFSLVSVLGSFPFMLMNFIMPTKIQFLYLILTGVFAAIAQFSLTYSYKYAPASEVA 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVI 306
I Y + + FI + D + + I++I A +VY
Sbjct: 236 IYNYVNIVFSGIIGFFIWNEIPDKLSILGGVIILIMATIVYFYNKKR 282
>gi|188990052|ref|YP_001902062.1| putative transporter [Xanthomonas campestris pv. campestris str.
B100]
gi|167731812|emb|CAP49996.1| putative transporter [Xanthomonas campestris pv. campestris]
Length = 291
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 95/292 (32%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L F Y + I+ + + LE + ++ VL + V F
Sbjct: 2 LKGVLLGFACYAAYSISDAFVKLLEG----TLPAYEVLCLGALLMLVAVPFLKKPEDRLR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L VFLKE +
Sbjct: 58 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVVFLKEEV 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A ++ + +LI+ L +A A I + + + +
Sbjct: 118 RWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVITLRMAGHSEKRLTLY 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V F + L GYGLL Y + A +S V +
Sbjct: 178 GAGVIGPLVMGAILMLPTFVWPTLYQWGLLAGYGLLAGLAAICLMYATRMAPVSVVAPTQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 289
>gi|167759384|ref|ZP_02431511.1| hypothetical protein CLOSCI_01731 [Clostridium scindens ATCC 35704]
gi|167662941|gb|EDS07071.1| hypothetical protein CLOSCI_01731 [Clostridium scindens ATCC 35704]
Length = 287
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 89/292 (30%), Gaps = 8/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L++ + + + L+ + + ++ R + ++
Sbjct: 2 SGSRRYKGILYIILSAFCFALMNLFVRLAGDLPSIQKSFFRNFVAAIFACMILLKDGVPF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K+ LK ++ + + YA+ S ++P +V +
Sbjct: 62 RCRKENLK------FMLLRSVFGTLGILCNFYAVDHLVLADASMLNKMSPFFAVLFSFLI 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE++ Q + + + + + + + A + G
Sbjct: 116 LKEQVKVPQALMVAGAFAGSMFVVKPTLTNMDLVPSMIGLLGGIGAGAAYTMVRKLGENG 175
Query: 199 E--MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E ++ + F ++ + ++ T L+ G+ + + A
Sbjct: 176 EKGPFIVFFFSTFSCLFTLPWLIFDYHPMSLSQTATLLMAGIAAAGGQFSITAAYCHAPA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + +Y+ + I Q D + +GI+ V+ L + N
Sbjct: 236 REISVYDYSQIIFSAGLGFVIFGQVPDAFSWVGYGIICTMAVLMFLYNIRNQ 287
>gi|77464566|ref|YP_354070.1| RarD family transporter [Rhodobacter sphaeroides 2.4.1]
gi|77388984|gb|ABA80169.1| Putative transporter, RarD family, DMT superfamily [Rhodobacter
sphaeroides 2.4.1]
Length = 318
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 99/305 (32%), Gaps = 14/305 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S+ + G + +++ + + V E + R +++P +F + +
Sbjct: 12 SMHPLRGIGLKVASVLIFIVMSALIKATSDRVPAGEAVFFRSFFAMPVIFVWLAWRHELR 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ LK V+ + + G L + + P+++V ++F
Sbjct: 72 TGLKAV-----NPMGHVWRGVVGTMAMGLGFAGLAYLPLPEVTTLGYAAPLLTVIFAAMF 126
Query: 139 LKERLNHLQIIAALLIILSL--------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L E + +I A L ++ + +++ G A V A + +
Sbjct: 127 LGEEVRAFRISAVALGLVGVLIVLSPRLTVLSGGMGHREAFGAALVVGGAVFAGLAQVFI 186
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ +L + + + + + LIG G+L + +
Sbjct: 187 RKLVHTEATSAIVFYFSLTATLLSFVTLPFGWVWPTPAEAALLIGAGVLGGVAQILLTSA 246
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A S V EY + + ++ + V +VV A ++ + +
Sbjct: 247 YRFADASLVAPFEYASMIFALLIGYLAFDEVPTLVMLGGASLVVAAGILIIWRERRLGLE 306
Query: 311 NKTKK 315
++
Sbjct: 307 RARQR 311
>gi|154245148|ref|YP_001416106.1| hypothetical protein Xaut_1200 [Xanthobacter autotrophicus Py2]
gi|154159233|gb|ABS66449.1| protein of unknown function DUF6 transmembrane [Xanthobacter
autotrophicus Py2]
Length = 311
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 88/295 (29%), Gaps = 16/295 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +LW I + + + V + + R W+ + L
Sbjct: 18 YLLLTVTALLWAINIVIGRVVAGHVPPVTLAFVR--WTGATLILLPFALGQVRRDLPLIR 75
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + +L + +A + Y L Q P++ +ERL+
Sbjct: 76 RHFWLLVLLAATG--IACYNAMSYYGLQYTQALNGLLVQSTAPLLVALWTFFIFRERLSL 133
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q+ + ++ +L++ H + + V ++ Y + P
Sbjct: 134 GQMAGIVTSLVGVLVIISHGSLDTFLHLKPNIGDVWIICALVIYAFYAAILRKRPGLGPL 193
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F + + L L + G ++ + + + F+ G++
Sbjct: 194 SFLVSIMALGSVLLAPFALWEAAQGRILHFDHMTLGVLAYVMIGPSIVAYLFFNRGVELV 253
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + P+ ++ L + I + +V+ + + L
Sbjct: 254 GANAAAPFLHLMPVFGTALAIIFLGETIAWYHIAGYALVITGIALATLAARAKRR 308
>gi|213158605|ref|YP_002319903.1| hypothetical protein AB57_2559 [Acinetobacter baumannii AB0057]
gi|215482941|ref|YP_002325146.1| hypothetical protein ABBFA_001243 [Acinetobacter baumannii
AB307-0294]
gi|213057765|gb|ACJ42667.1| hypothetical protein AB57_2559 [Acinetobacter baumannii AB0057]
gi|213987813|gb|ACJ58112.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
Length = 296
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 100/287 (34%), Gaps = 9/287 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ L +GTL + A +L G L+ S ++ R L S + ++
Sbjct: 1 MDDHHLKRKVGTLEMVVAMLLSGSIGLFV-IKSGQSPFNIVFFRCLISALCLIPICYFYG 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
K K + ++V S ++ +W A L + Y V P + FLG
Sbjct: 60 H----FKKVYFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVISFLG 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ E+LN ++ ++ + L+++ + S +
Sbjct: 116 ALVFHEKLNKNDVLWTIVAFIGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITK 175
Query: 196 FFIEMCVLAIPALF----YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
L I + +V F + L +F++ + I
Sbjct: 176 KLSNTPPLLIVFIQTLSGAIVMAPFMSVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
K+ L+ + I+ + P+ IV F + + + + G++++ ++
Sbjct: 236 KKIPLNNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVL 282
>gi|310780377|ref|YP_003968709.1| protein of unknown function DUF6 transmembrane [Ilyobacter
polytropus DSM 2926]
gi|309749700|gb|ADO84361.1| protein of unknown function DUF6 transmembrane [Ilyobacter
polytropus DSM 2926]
Length = 307
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 82/290 (28%), Gaps = 13/290 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G F +WG T T+ L + EV+ R L + + F+ +
Sbjct: 2 NSKYIGYTMAFITIFVWGTTYAITKNLLNYFTPFEVLFLRFLIAYLFLLIVKPTFNFKFN 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + + + L S + I
Sbjct: 62 FKFNFQEEKLFLLLGLTGGMLYFLVENMALKYTSASNVGLIVSSIPIFSSIIAHF--TTE 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP---------- 189
E+ + I+ L I + ++ + L I + C I
Sbjct: 120 DEKFDKNLILGFALAITGIFLILYNGNKVLKINPIGDILAVVCSIIWAIYSNLLRKVDKS 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ L + + + +S F ++S
Sbjct: 180 YSGLLVVRKTFFYGLMFMLPGLYLLKVKIHFEYLFNKDVSFSIFYLALVASSICFIMWSR 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I + Y PL+ ++SSV IL + I + +++ +++
Sbjct: 240 SINIIGIIKTTNFIYLIPLVAMISSVVILDEKITPLMITGGLLILSGVLI 289
>gi|19705065|ref|NP_602560.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296329326|ref|ZP_06871827.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|19712985|gb|AAL93859.1| Transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296153682|gb|EFG94499.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 293
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 94/283 (33%), Gaps = 12/283 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
LF+ A ILWG L+++ + +++ R L+S+ + +FS +
Sbjct: 6 YLFIIAAAILWGSIGLFSKIAGNKGFTPIDICFIRSLFSVAILGI---FFSIKDRNIFKL 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +++ +I A+ + + + P I + L E++
Sbjct: 63 ESVADMKYFIGTGIISFSLYNWSYIAAIKETSMGVAAILLYTAPSIIMILSVFLFHEKIT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFF 197
++I+ ++ + +++T + ++ +
Sbjct: 123 RIKILVIIITFIGCMMVTGIFEGDNIISWKGFLYGVLSGIGYGLYSIFGKYALKKYSSVT 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + V + + + + ++ G+ + + S
Sbjct: 183 VVFYTFLMSTFLFSVIGKPAIVISKINKSHSWIFIISFALFSAVIPYIFYTKGLSKIEAS 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
I+ P++ V V I + I+ ++ + +V+ A+ +
Sbjct: 243 KASIIANIEPVIAAVIGVCIFSEKINFLKILGIILVLGAVCII 285
>gi|195156984|ref|XP_002019376.1| GL12375 [Drosophila persimilis]
gi|194115967|gb|EDW38010.1| GL12375 [Drosophila persimilis]
Length = 329
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 89/281 (31%), Gaps = 7/281 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + + L V+ +E+ + R + L ++Y
Sbjct: 36 LGIILATLSSLFFSLCSVIVKGLVDVNPMELAAFRFVGVLLPTIPILIYTRQP------- 88
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +L+ + YA S F TPV FLKE
Sbjct: 89 VFPQGTRVILLMRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT 148
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+I + ++ ++++T + + + R + F + M
Sbjct: 149 MFNVITINITLVGVVLITRPPFVFGETTPPPDRTADGQAIRHLGTPLKNLHFSVIMTNFG 208
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
AL Y + S G + D ++ G+ + + + ++ + V I
Sbjct: 209 ATALVYTLIVCASIGAVCWPSCGRDRWLVLVLGVFSFLGQILLTLSLQIEQAGPVAIARC 268
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + + + +V+ ++++ L
Sbjct: 269 ADIVFAFIWQMIFFGETPNGYSLFGALMVISSVILTALKKW 309
>gi|149913017|ref|ZP_01901551.1| Putative transporter, RarD family, DMT superfamily protein
[Roseobacter sp. AzwK-3b]
gi|149813423|gb|EDM73249.1| Putative transporter, RarD family, DMT superfamily protein
[Roseobacter sp. AzwK-3b]
Length = 307
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 104/306 (33%), Gaps = 15/306 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G C+ +L+ + + V + + R +++P + + +
Sbjct: 1 MSPFKGIALKLCSVMLFVVMSALIKAASDHVPPGQAVFFRSFFAIPVILLWLALRGDLRT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ + + + G L + + P+++V ++FL
Sbjct: 61 GLRVQSR-----MGHFWRGVVGTTAMGLMFAGLGLLPLPEVTALGYTAPLLTVVFAAMFL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPV 190
ER+ +I A L ++ +LI+ L + V A C A I V
Sbjct: 116 DERVGLFRISAVALGLVGVLIVLSPRLNTLTGETVQTLEAIGAVVVLLGAVCAALAQIYV 175
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ +L + + + + + +T+FLI GLL +
Sbjct: 176 RKMVATEQTSAIVFYFSLTSTLLSLLTIPFGWVIPGATETVFLILAGLLGGTAQIFLTSS 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A S V +Y + L ++ F+ + + +V++A ++ +L +
Sbjct: 236 YRFADASVVAPFDYASMLFALLIGYFVFAEAPTGPMLLGAALVILAGIIIILRERHLGIQ 295
Query: 311 NKTKKS 316
++
Sbjct: 296 RGKARA 301
>gi|77461129|ref|YP_350636.1| hypothetical protein Pfl01_4908 [Pseudomonas fluorescens Pf0-1]
gi|77385132|gb|ABA76645.1| conserved integral membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 292
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 79/287 (27%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L + A L+ +++L + ++ + ++ L
Sbjct: 11 NQPFKGILLIVVATFLFSSHDALSKYLSGFYPIVMVVW-----ARYLVHTLLMAGIFLPQ 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K + A L FF ALL + F+ PV+ L LK
Sbjct: 66 SGLRVLRTKRPLWQLARALCLLGTSLFFTTALLYIPLAEATAVNFLAPVLVTALSVPLLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q IA + + +LI+ G + SA F +
Sbjct: 126 ERVTRGQWIAVVCGFIGVLIIVHPGGELFTPAILLPFCSALFFCFYQLLTRKLAEVDSPT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + ++ L ++ G + + A + +
Sbjct: 186 TSNFFAGLCNTLVMSALVPFFWQVPSLGHALLMLALGSCGMTAHLFLTQAFRHAAPALLA 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + + I ++ + +
Sbjct: 246 PFGYCQIVFAGLLGWLLFAHTPTLMTVIGIAVICCSGLAAAWQQSRR 292
>gi|223042726|ref|ZP_03612774.1| transporter [Staphylococcus capitis SK14]
gi|222443580|gb|EEE49677.1| transporter [Staphylococcus capitis SK14]
Length = 288
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/288 (15%), Positives = 102/288 (35%), Gaps = 6/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I+ + +
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIIKYKQPI-- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 60 ----FGKLSSQPLLISRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + +IA +S A V +
Sbjct: 116 EKVRKYQISAMIIAILGMLLIVKPEFSSSVIPSIAGLFSGIFAASAYTCVRALSTREKPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF VV F L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVVVLIPFSIFTFEPMTTVQVLYLLGAGLSAAVGQIGITLAYSFAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I Y + + + + + D + T+ + +++ A S
Sbjct: 236 IFTYASIIFTALFGFILFGETPDMLATLGYVVIISASYYMFEKARRES 283
>gi|165976469|ref|YP_001652062.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|165876570|gb|ABY69618.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 297
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 120/294 (40%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L +S + R++ +LP +FFAI
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ ++TI+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KRLKQQPHLILVILITSTIVGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVAFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + Y R+T + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPVYFHIRRTFQLSNIYSFIFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + + N F+ +++ ++ + +G
Sbjct: 183 IFLIPISLYFIW---NTDMDFIYAQNPNIYYFIAILSVVSGTALLSYTLASTILPFNMLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|115522579|ref|YP_779490.1| hypothetical protein RPE_0551 [Rhodopseudomonas palustris BisA53]
gi|115516526|gb|ABJ04510.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisA53]
Length = 303
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 87/295 (29%), Gaps = 9/295 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + + G + A + + + + SV +++ R L + I
Sbjct: 9 TEADQRRAHLAGIALMLAAMFCFAFGDAFGKLVVATYSVGQLLLLRACAGLVVMAPLIWQ 68
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L+ L+ + + + Y + +
Sbjct: 69 QRAALTTLERPRLQLVRIVVATLEVAAFFLA-------TRYLPLADVITYYLASSLFVTV 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
S+FL E+++ ++IA + L +LI S A+ ++ FA + S
Sbjct: 122 GASLFLGEQVDRARLIAVAVGFLGVLIALQPSSQSFSWPALIALAASALFAALMLITRSL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+M + A + + D L+ G++ + + ++
Sbjct: 182 RN-TPDMVLAAQQFIGTAALGAVLAPAGWITPAPIDWLWFALAGIVAAAGLVCVNRALRS 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
A S V +Y+ + + + I++ A + +
Sbjct: 241 APASVVVPYQYSMIIWAALFGYLFFGDIPTLATWVGVAIIIGAGLFIFFREQRSR 295
>gi|229162254|ref|ZP_04290222.1| Transporter, drug/metabolite exporter [Bacillus cereus R309803]
gi|228621212|gb|EEK78070.1| Transporter, drug/metabolite exporter [Bacillus cereus R309803]
Length = 294
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 97/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYAILKITEK-KQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T+ + + S TP V ++ L
Sbjct: 61 QKKATISKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLIITTYAIFFSLFFITPFMIWEFQSNLIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|110667149|ref|YP_656960.1| transporter of the drug/metabolite transporter (DMT) superfamily
[Haloquadratum walsbyi DSM 16790]
gi|109624896|emb|CAJ51305.1| transporter of the drug/metabolite transporter (DMT) superfamily
[Haloquadratum walsbyi DSM 16790]
Length = 299
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 98/301 (32%), Gaps = 9/301 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G +FV A +G ++ + V + + ++ + ++ SL
Sbjct: 2 RDATLGAIFVLIAAAGFGTIGIFGELAAIVDLELAALLPIRFAFATIIITLLAVIRDWSL 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + I F ++L + L + + P+ V V
Sbjct: 62 PP----TRREWVITLGLGGIYTAMTLLFFFSLRSLTAGLATIVLYTYPIFLVAFSVVLQT 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + +++A IL ++I+ + S I ++ A S
Sbjct: 118 ETMTPQKLVALTTTILGVIIVIGIDSPNIDSFGILLSLGAALCYAIYTMGSRSVVTQATP 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGN-----IPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L I L G + + L +F G+ R +
Sbjct: 178 QGLTIGVLIGTTVTMIGYGVIDGGLSLPREQTHWGIILGIVIFSTVLPHILFYQGVSRLE 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S VGI+ P++ ++ V L + + I G V+I +V P+ +S ++ +
Sbjct: 238 ASRVGIISTIEPVVTVILGVIFLNEALTIPIIIGGGFVLIGVVFAQRPSGRSSPQSDLSE 297
Query: 316 S 316
S
Sbjct: 298 S 298
>gi|187779356|ref|ZP_02995829.1| hypothetical protein CLOSPO_02952 [Clostridium sporogenes ATCC
15579]
gi|187772981|gb|EDU36783.1| hypothetical protein CLOSPO_02952 [Clostridium sporogenes ATCC
15579]
Length = 311
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/307 (13%), Positives = 104/307 (33%), Gaps = 17/307 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+N + +++ LF+ ++WG + + L+ ++ +++ R + + G+ +++F
Sbjct: 6 KNRKIRSLIADLFLLLVALMWGGGFVAVKDALDSITPYYMMTIRFICA--GLLLGLIFFK 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + K + N + L + L +F V VI F
Sbjct: 64 QMIKITKKDIVNGVII------GIFLFGGFAVQTIGLQYTTAGKQAFLTAVYVVIIPFFA 117
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIP 189
K + + I++ +L ++ + ++T+ G I A
Sbjct: 118 WFVDKTKPDCYTIVSTVLALIGIGLLTITKGFEFNINIGDTLTLIGAVLFAAHIVAVGHF 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S+ + + + + + + + + F I +
Sbjct: 178 AKKSDPIILSVIQMIFAGILSFICALIFEPKFTGVSKGAFSAIFYLVFFSTMLAFFIQNI 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + VGI+ + + +V L I I+ IA++ T ++
Sbjct: 238 AQRYTHPNHVGIILCLESVFGAILAVIFLNDVFTVNMIIGCAIIFIAII--TSETKLSFL 295
Query: 310 KNKTKKS 316
K+K+ K+
Sbjct: 296 KSKSNKN 302
>gi|288573438|ref|ZP_06391795.1| protein of unknown function DUF6 transmembrane [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569179|gb|EFC90736.1| protein of unknown function DUF6 transmembrane [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 302
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 93/303 (30%), Gaps = 14/303 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G L + +LWG++ T+ ++ + L +++ R +S +
Sbjct: 8 KKKMALGDLGILTCALLWGVSFAATKEVMKYMGPLWLLAFRFTFSFLLIAGL-------- 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + + + + ++L V L ++F VI F+
Sbjct: 60 SPKRLKKLTARDIKVGGIIGSLLLVAMALQTIGLQYTTTGKSAFITACYVVIVPFITWAA 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +A+ + +L + +TL G L A S
Sbjct: 120 DRRSPGFKAFVASGICLLGMGAITLDGVNMGIGFGELLTLGCALAFAIQLVVIDRMAQES 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + M A+ A+ VV + + +
Sbjct: 180 DALTLTMVETALSAVACVVGALIWEPMPQVRSMAVVGWMAYLVVGCTLIPYALQIKSQQL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ I+ + + + L +P+ + + G++ ++++ L S K +
Sbjct: 240 TSPTHASILLIMESVFAMTVGIVFLDEPLTSRLALGCGLIFFSILLTELDLASLSKKLRR 299
Query: 314 KKS 316
+++
Sbjct: 300 QEA 302
>gi|152988880|ref|YP_001347943.1| hypothetical protein PSPA7_2579 [Pseudomonas aeruginosa PA7]
gi|150964038|gb|ABR86063.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 294
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 93/296 (31%), Gaps = 8/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S+ G + + + + + + V+ V+ R L + +
Sbjct: 4 SQPQRRNSPTQGAAMLALSALFFALMGGLIREASSTVNNETVVFFRNLVGVLFFLPLALT 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + L + T + YAL + PV +
Sbjct: 64 RGIGPLRTRRPLSHLLR-------TTYGLGGMYCYFYALAHLPLTDAMLFSYAAPVFTPL 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +++KE L + A L+ L +L++ SG + +A+ S+ A + +
Sbjct: 117 IAHLWIKEPLTRRMMGATLVGFLGVLLVARPSGAVVAPIALVGVASSLMAACAFVSIREM 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ ALF +++ + N + L L+ GL S S
Sbjct: 177 SDSEPAYRIVFYFALFGALFSAVPLAWAWQPLNGHELLLLLAAGLFASLGQLTMSQAYAL 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +G + Y A + V + + + ++ A ++ LL
Sbjct: 237 ASPGVIGPIAYMAIVFAGVIAWLRWDELPSHTSLLGAALIFAASLIPLLGNRSAER 292
>gi|221640477|ref|YP_002526739.1| hypothetical protein RSKD131_2378 [Rhodobacter sphaeroides KD131]
gi|221161258|gb|ACM02238.1| Hypothetical Protein RSKD131_2378 [Rhodobacter sphaeroides KD131]
Length = 318
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 99/305 (32%), Gaps = 14/305 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S+ + G + +++ + + V E + R +++P +F + +
Sbjct: 12 SMHPLRGIGLKVASVLIFIVMSALIKATSDRVPAGEAVFFRSFFAMPVIFVWLAWRHELR 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ LK V+ + + G L + + P+++V ++F
Sbjct: 72 TGLKAV-----NPMGHVWRGVVGTMAMGLGFAGLAYLPLPEVTALGYAAPLLTVIFAAMF 126
Query: 139 LKERLNHLQIIAALLIILSL--------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L E + +I A L ++ + +++ G A V A + +
Sbjct: 127 LGEEVRAFRISAVALGLVGVLIVLSPRLTVLSGGMGHREAFGAALVVGGAVFAGLAQVFI 186
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ +L + + + + + LIG G+L + +
Sbjct: 187 RKLVHTEATSAIVFYFSLTATLLSFVTLPFGWVWPTPTEAALLIGAGVLGGVAQILLTSA 246
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A S V EY + + ++ + V +VV A ++ + +
Sbjct: 247 YRFADASLVAPFEYASMIFALLIGYLAFDEVPTLVMLGGASLVVAAGILIIWRERRLGLE 306
Query: 311 NKTKK 315
++
Sbjct: 307 RARQR 311
>gi|330862573|emb|CBX72727.1| protein rarD [Yersinia enterocolitica W22703]
Length = 254
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
++ S ++ +KN K + +L +A ++A +W FI+A+ S Y
Sbjct: 5 FFFMLILLTVSRNWPQVRSAIKNRKRLLLLAVTAVLIASNWLLFIWAVNHNHMLEASLGY 64
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCF 183
F+ P+++V G +FL ER +Q +A L +LI G P++ L +A+T++ Y
Sbjct: 65 FINPLVNVLFGMLFLGERFRRMQWVAVALAFGGVLIQLWQFGSLPVIGLGLAITFALYGL 124
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
RK + + + G +E L A Y+ + S H + L G++ +
Sbjct: 125 IRKKLGIDAQTGMLVETMWLLPIAAVYLFFIADSPTSHMGANAWSLNILLAAAGVITTIP 184
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F+ R +LST+G +Y P LM + +V + I + + F + A++++ L
Sbjct: 185 LLFFTAAATRLRLSTLGFFQYLGPTLMFILAVTFYGETIGNDKMVTFVFIWAALLLFTLD 244
Query: 304 TVINSGKNKT 313
+ K +
Sbjct: 245 ALYTQRKLRA 254
>gi|227535916|ref|ZP_03965965.1| DMT superfamily drug/metabolite transporter [Sphingobacterium
spiritivorum ATCC 33300]
gi|227244159|gb|EEI94174.1| DMT superfamily drug/metabolite transporter [Sphingobacterium
spiritivorum ATCC 33300]
Length = 304
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 113/291 (38%), Gaps = 9/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L F A +WG + +++ +++ R+L ++ ++ I+ F
Sbjct: 15 FLAAFLAPFIWGFMSIPVRWIRGWPAEDILYFRILTAMLILWIFILIFRRKKLKEDIYHY 74
Query: 87 N-------PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K V + + ++ + +W +IY + +F+Y + P+I+ L
Sbjct: 75 KELVQKDKRKYVWLTILASLFIFGNWYTYIYCINHISIQAAAFAYMLCPLITTAAAHFIL 134
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+E L+ ++ A + S++++ S I +L A+ + + G +
Sbjct: 135 REELSLIKKTALFFALCSVIMLATGSLIEVLWSIAIGGLYAFYLIIQRVVQGFDK--LNI 192
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + + V+ + I L + + + + STV
Sbjct: 193 LAIQLLLCMVIVIPKLLFNHHALPTAPVFWYTTFIIALLFTIIPLYLSMFALNKISSSTV 252
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
GIM Y P++ +VF K+ +D + +G++++A++++ + K
Sbjct: 253 GIMLYINPIIAFFLAVFYFKEQVDPHKFWAYGLLIVALLLFNSKVLTKILK 303
>gi|126348584|emb|CAJ90308.1| putative integral membrane protein [Streptomyces ambofaciens ATCC
23877]
Length = 320
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 79/297 (26%), Gaps = 12/297 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFA 70
+S LP G L++ A + WG + + + + R L +
Sbjct: 1 MSNAFTGLPVGRGLLYLIVAGVAWGTAGAAASLVYRASDMGPVALSFWRCAVGLALLLAV 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
S A LV + +F T T + PV+
Sbjct: 61 RPLTSRRPRGAVRAPFARTARRALVTGLGLAVFQTAYFAAVRSTGLAVATVVTLGAGPVL 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS---------LAIAVTWSAY 181
+ L ERL A L + L ++ L G + A +
Sbjct: 121 IALGARLALGERLGWGGTTAVLGALAGLAVLVLGGGTASVRLSGVLLALLSAAGYSLMTL 180
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
G+ G H L + + +
Sbjct: 181 LTRWWGRDGGADAGSTSVGAFAVTSLCLLPFALVEGVVPHTAEPARLLWLLVYVAAVPTA 240
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ ++ G + +TV ++ P+ +V +L + + +++ ++
Sbjct: 241 LAYGLYFAGAAVVRSATVSVIMLLEPVSAAGLAVLVLGEHLTAATLAGTLLMLGSVA 297
>gi|325924954|ref|ZP_08186380.1| putative membrane protein [Xanthomonas perforans 91-118]
gi|325544617|gb|EGD15974.1| putative membrane protein [Xanthomonas perforans 91-118]
Length = 289
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 91/282 (32%), Gaps = 8/282 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + +G+ + + ++ E+ R + L + IV L + +
Sbjct: 1 MLTSTFAFGLMAITIRLASSTIATTEIAFFRNAFGLLALLPLIVRPGKPLPRTRQLPQ-- 58
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
I +A+ + TP+ L V+L E++ +
Sbjct: 59 -----YFARTLIGLASMLCGFWAIGHLPLSQAISLSYSTPLFVTVLAVVWLHEQVRLRRW 113
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A + +L++ + +A A I + V+ +
Sbjct: 114 LAVAAGFIGVLVILRPGSSTFTPGLLIALLAAVISAIVAIQIKQLSRSDDSDTVVFYTYV 173
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F+V + + ++L+ G+ + ++ +K ++S + + +
Sbjct: 174 FWVPMSLIPALFQWNWPQGIGWVWLVATGIFGTAGQLFWTRALKLGEVSALQPISFMQLP 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L+ + ++ + I+ + I++ A V + + +
Sbjct: 234 LVALLGWWLFGEAIERHTVVGAVIIIGANVYIAHRETVLARR 275
>gi|283470023|emb|CAQ49234.1| transporter [Staphylococcus aureus subsp. aureus ST398]
Length = 288
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 102/290 (35%), Gaps = 7/290 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L VFL
Sbjct: 56 HQPMFGKLSSQPLLLTRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + + L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFTAYTYEPMSQTQILYLLGAGLAAAVGQIGVTLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I Y + + + + + D T+ + +++ A Y+ K
Sbjct: 236 IFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASY-YMFEKARRDAK 284
>gi|242372962|ref|ZP_04818536.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis M23864:W1]
gi|242349288|gb|EES40889.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis M23864:W1]
Length = 288
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 98/288 (34%), Gaps = 6/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + + + ++ + + V + R ++ F I
Sbjct: 2 NPKVKGIIAILISAVGFSFMSVFFRLAGDLPVFQKSLARNFVAMFIPLFFIF------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 56 KQPMFGKLSSQPLLISRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTILLSLIFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + +IA +S A V +
Sbjct: 116 EKVRKYQISAMIIAILGMLLIVKPEFSSSVIPSIAGLFSGIFAASAYTCVRALSTREKPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF VV F L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVVVLIPFSIFTFEPMTTVQILYLLGAGLSAAVGQIGITLAYGFAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I Y + + + + + D T+ + +++ A S
Sbjct: 236 IFTYASIIFTALFGFILFGETPDMFATVGYVVIIGASYYMFEKARRES 283
>gi|291299540|ref|YP_003510818.1| hypothetical protein Snas_2030 [Stackebrandtia nassauensis DSM
44728]
gi|290568760|gb|ADD41725.1| protein of unknown function DUF6 transmembrane [Stackebrandtia
nassauensis DSM 44728]
Length = 308
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/292 (9%), Positives = 79/292 (27%), Gaps = 8/292 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAI 71
S ++ P G LF+ A + WG T + + L + R + + +
Sbjct: 3 SHPDSRTPVARGLLFLSIAGVAWGTTGAAVDLIFGSSDLGPLAMSFWRYVGGFLVLLAVL 62
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF-----SYFV 126
+ P + + + + + + +
Sbjct: 63 AVRRALGRRPRAGSGRPGPRIFTGLALAVFQTAYFVAVAETGVAVATVVTLGAAPVLTAI 122
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK 186
+ I+ +++L T+ + +LA A ++A +
Sbjct: 123 GGRFLLKERLGGGGLLAVAGAIVGLAVLVLGNDATTVRPLGVVFALASAAAFAACNVLAR 182
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + L + + + +
Sbjct: 183 RHGDDQDPYTMTVWAFGIGAVAMFPFALAEGMIPTMTDPVLVFALLVYVAVVPTGMAYPL 242
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G + +T I+ P+ V ++ +L +P+ ++ +++ ++
Sbjct: 243 YFTGAGAVRAATGSIVMLIEPVAAAVLAITLLGEPLTLATSLGTVVLLASVA 294
>gi|20808974|ref|NP_624145.1| DMT family permease [Thermoanaerobacter tengcongensis MB4]
gi|20517640|gb|AAM25749.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Thermoanaerobacter tengcongensis MB4]
Length = 298
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 92/292 (31%), Gaps = 17/292 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + A LWG T L+ + + + +V R+ + F I SL
Sbjct: 2 RRGEVLALSAGALWGTTGLFVRMIVKLGFTTADVAFLRMFFGALLAFSIIAVLRQSFSLP 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K +L L + + A+ + + P V L +F E
Sbjct: 62 LWSWK-----YLLGTGILSLTLFNWSYFQAIKLTTLPIAVALLYTAPAFVVVLARIFYGE 116
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----------CFARKTIPVG 191
R+ + IA +L + +L+++ + I+ Y G
Sbjct: 117 RITLRKSIALILTLTGVLLVSGALRSFITGEEISWLGVLYGLLSAVGYGLYTIFAKPLSG 176
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I I + V + F L + + + +++ +
Sbjct: 177 HIPPERIAAFTFLIATIALVPISSVLAKPSIFFNTHVILLGFLFGAFSTALPYFLYTRAL 236
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ I P++ + VF+LK+P + + ++ A+++ L
Sbjct: 237 TFMEAGRAAIFTTMEPVVATLIGVFVLKEPFNLFEFLGITCIISAVILLSLS 288
>gi|261420353|ref|YP_003254035.1| hypothetical protein GYMC61_2992 [Geobacillus sp. Y412MC61]
gi|319768019|ref|YP_004133520.1| hypothetical protein GYMC52_3015 [Geobacillus sp. Y412MC52]
gi|261376810|gb|ACX79553.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y412MC61]
gi|317112885|gb|ADU95377.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y412MC52]
Length = 302
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 95/290 (32%), Gaps = 13/290 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T+ +F + + ++ ++ Q + +R+ ++ + + L +
Sbjct: 5 STIKAYAALFIGALAVSTSAIFVKW-SQAPSAVIAFYRLFLAVAIMTPLFLRHRSELRGI 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + S +LA H+ + +L + + P+ + G++F +E
Sbjct: 64 -----SRRDWLFSLCSGVLLAFHFILWFESLDYTSVASSVVLVTLQPLFAFAGGALFFRE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
RL + +A+L ++ ++++ ++ + +
Sbjct: 119 RLTVGAVGSAVLAMIGSVLISWGDFRVSGEALYGDGLALLSCAFVTAYWLFGQEVRQRLS 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V +I A ++ FL + + ++ +K
Sbjct: 179 LMTYTYIVYSISAAVLWLYAMLFRLSLTAYQLTDWLCFLALAVIPTLLGHSVMNWAVKWV 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
STV + P+ + ++ +PI + I ++ + +YL
Sbjct: 239 SASTVSMAILFEPIGASALAYWLFGEPIRPFQWIGGIFILTGIALYLWEK 288
>gi|313234794|emb|CBY24739.1| unnamed protein product [Oikopleura dioica]
Length = 311
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 90/308 (29%), Gaps = 16/308 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
K S P G L F + I + + + L VS ++ + R + Y
Sbjct: 5 KSEESSPKPFGLLLAFLSAIFFSFNGVIIKQLS-VSPIQAVFWRCTSQFIMLLPVCSYRM 63
Query: 76 GG-------LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
L+ P L F TI ++ +
Sbjct: 64 SKGQKDGDLFGQLRKKNSVPSRFLWLCFRGTIGSISMATIFTSFKMLPIGDCFALINTGV 123
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSA 180
V S + ++L ++ + + +++ + IL ++I + S I + +
Sbjct: 124 VWSTLIAWLWLGDKPHFVDLLSLPVSILGIVIFSKPSFIFAVQTDVNINGVIVAVAGAIG 183
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
A T+ F + E L D +L+ G
Sbjct: 184 ASIAHTTVRKLGKSVHFTVSITYFSFFGVVLSALYIHFIEGHQLPCSSDIPWLLFIGPNG 243
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ ++R K V I+ + +F+ + DT+ + +++ +
Sbjct: 244 LLGLSCLTLALQREKPGRVTIIRSLEIPIAYCFQIFLFDETPDTMTIVGVILIMAGGFMI 303
Query: 301 LLPTVINS 308
+ ++
Sbjct: 304 TIRKLLKK 311
>gi|282859626|ref|ZP_06268728.1| putative membrane protein [Prevotella bivia JCVIHMP010]
gi|282587544|gb|EFB92747.1| putative membrane protein [Prevotella bivia JCVIHMP010]
Length = 327
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 99/292 (33%), Gaps = 5/292 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
N T+ G L+ + +G PL++ L ++ V+ +R + + ++
Sbjct: 12 NMKSETLKGNLYAILSASTFGTIPLFSVPLMKAGFALPSVLIYRYAFGCIFMLAVLLLLK 71
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + K +L +++I ++ + + + + +I
Sbjct: 72 KNMRIDKKEALEIAFCSLLYTASSICLFEGYNYMPSGVATTLLFSYPVWTELLLIIFVHE 131
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA--YCFARKTIPVGSS 193
+ L+ + + + + + T I + + Y + +
Sbjct: 132 KLTLRISFAIIFAVLGVAFLGGIANSTGAYPIQGVLFELGSGLCYAVYMVIFPRMKICRV 191
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI-PDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + L+ ++++G + G L N ++ + + ++
Sbjct: 192 PALKVNFYIFIAAMLYLLIYSGITTGGIQRLDNWEACLSLILLGLIPTTISNLALVKAMR 251
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ V I+ PL I+ +F+L +P+ +I +++ A+ ++
Sbjct: 252 FTSSANVAILGAFEPLTAIIIGIFLLGEPLTLSISIGIVLIIAAVSSLIIHG 303
>gi|224372183|ref|YP_002606555.1| integral membrane protein DUF6 [Nautilia profundicola AmH]
gi|223589250|gb|ACM92986.1| integral membrane protein DUF6 [Nautilia profundicola AmH]
Length = 299
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 105/282 (37%), Gaps = 7/282 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + A +WG TPL + + + + RVL++ P + + V +G
Sbjct: 20 KNEKKGLIEMIGATFIWGSTPLMSIY-SSLPSGVFVFFRVLFAFPFILYFAVRRTGIREF 78
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK P + S L V+W FF +A Y+ PVIS+ L +VFLK
Sbjct: 79 LKLRPFWPLLI-----SGIALGVNWVFFFWAFDYADVATVVTIYYAGPVISLILAAVFLK 133
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E +N +IAA+L + + I++ IA+ + A ++
Sbjct: 134 EEINVFIVIAAVLAFVGV-IVSNGGVSLSKGAFIALLAAVSYGALGFFSKIATMHHRAAA 192
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + F + L + I + + ++ + K+S
Sbjct: 193 VTAWQIIISVFITAPFLFLSDWRLSVQAIVIAFITGTVHTALALFLWYDALNYIKVSIAS 252
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+++Y + +V + L Q + + I ++ A V+
Sbjct: 253 VLQYLDIVFAMVLAFLFLGQVPNLNQLIGAVLISFAGVLSTF 294
>gi|46143562|ref|ZP_00135004.2| COG2962: Predicted permeases [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208518|ref|YP_001053743.1| hypothetical protein APL_1044 [Actinobacillus pleuropneumoniae L20]
gi|126097310|gb|ABN74138.1| hypothetical protein APL_1044 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 297
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 119/294 (40%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L +S + R++ +LP +FFAI
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ ++ I+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KRLKQQPHLILVILITSAIVGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVAFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + Y R+T + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPVYFHIRRTFQLSNIYSFIFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + + N F+ +++ ++ + +G
Sbjct: 183 IFLIPISLYFIW---NTDMDFIYAQNPNIYYFIAVLSVVSGTALLSYTLASTILPFNMLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|24373260|ref|NP_717303.1| hypothetical protein SO_1692 [Shewanella oneidensis MR-1]
gi|24347497|gb|AAN54747.1|AE015615_3 membrane protein, putative [Shewanella oneidensis MR-1]
Length = 301
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 90/298 (30%), Gaps = 12/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ P + A L G ++ +F + + +R+L + ++
Sbjct: 1 MTPPPTQAIVLAILAASLMGTIGVFARFAT-MPAEHITFYRLLLGAMFLTAYMLLTGKRD 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K +LA F+I A+ Q ++ PV++
Sbjct: 60 QIRHRPSKRTLIN------GAMLAGFMAFYIEAIEYTQMATVIMIIYLAPVVTSLFAHFV 113
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-----IPLLSLAIAVTWSAYCFARKTIPVGSS 193
ERLN I + L ++ ++M + + + ++ +
Sbjct: 114 FNERLNRFSIASVALALMGFILMLPVTSSQSLYQSEIMGYFYAILALITYSGFILINRKP 173
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L ++ + T L L + +
Sbjct: 174 SAVSPYQSTLVQLSVGALCLLPLMLTTPLVPSLNQLTWLLAIGFLPGFLAILCAVKALNQ 233
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T G + Y P++++V + ++ + + + + ++++A + + + K+
Sbjct: 234 LPSVTYGTLSYVEPVVVVVLAWWLFNEALTAQQLMGVALIILAGIAQGWQSQRKALKS 291
>gi|291296561|ref|YP_003507959.1| hypothetical protein Mrub_2185 [Meiothermus ruber DSM 1279]
gi|290471520|gb|ADD28939.1| protein of unknown function DUF6 transmembrane [Meiothermus ruber
DSM 1279]
Length = 291
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 87/290 (30%), Gaps = 14/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + L+ S + R L + + + L +D
Sbjct: 6 LLAIALTILPWASAFAGIRAGLQDYSPAHLTLLRFLVASSVMLVYALLVRMPLPERRDWP 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + V+ + +T + + V PV + FL+ERL+
Sbjct: 66 AIFGLGFLG------ITVYHTALNFGQVTVKAGPAALLIAVGPVFVALMSYFFLRERLSA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + + ++ + + + ++ ++ F +
Sbjct: 120 WGWLGIAVAFTGVALIAVGNHPGSFQLEPGALLIVLSALVTSVYFVFQRRLARKYNPLNF 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L +V+ E + L + ++Y + RA S
Sbjct: 180 TAYTIWAGTLPLLVFWPGLFSEVQAASPQATWSVIYLGVLPGGLSYLTWNYALSRAPASQ 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V Y +P+L + + L + + + GI ++ +++ +
Sbjct: 240 VTSFLYVSPVLATLIAYLWLGEVPGLLALVGGGIALVGVIIVNTLGRVTR 289
>gi|156976854|ref|YP_001447760.1| hypothetical protein VIBHAR_05630 [Vibrio harveyi ATCC BAA-1116]
gi|156528448|gb|ABU73533.1| hypothetical protein VIBHAR_05630 [Vibrio harveyi ATCC BAA-1116]
Length = 292
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 93/291 (31%), Gaps = 16/291 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G F+ + + + + L + V E+++ R L SL + + K
Sbjct: 4 IGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDV--------KRK 55
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L + + Y++ T + ++ PV + L FLKER
Sbjct: 56 GISVWGNNKPLLFARGAVGTMALMCVYYSVTTLPLAEATIFQYIHPVFTALLAVFFLKER 115
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA------YCFARKTIPVGSSEGF 196
+ I L +L + +M P A+ + + + + V
Sbjct: 116 IQSSTFICIALCLLGVYVMVRPETGPDTEHALPMFSVMIAILGAFGSSIAYVIVRKLSQT 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L + + G+ F + ++ T+ L+ G+ + ++ +
Sbjct: 176 EDSSVIIFYFPLVALPASILLIGDQFVMPDLYLTMMLVLVGVFTQIGQLGLTKAMQTQEA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + +V + + + ++V ++ + +
Sbjct: 236 GKASAYSYVQIIFSVVLGIVFFGELPSAWTYLGGALIVTGALINVFGQHLK 286
>gi|126729994|ref|ZP_01745806.1| hypothetical protein SSE37_16488 [Sagittula stellata E-37]
gi|126709374|gb|EBA08428.1| hypothetical protein SSE37_16488 [Sagittula stellata E-37]
Length = 322
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/289 (17%), Positives = 91/289 (31%), Gaps = 7/289 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P G LF A+ ++ + ++L S +VI L S P V F ++
Sbjct: 2 SPNAKGALFALTAFGIFATHDVIIKYLGASYSPFQVIFFSTLMSFPLVSFMLM------R 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
P ++ YA T F TP++ L L
Sbjct: 56 DPLPGTLRPVHPWWTAIRTAAAMLNGMCAFYAFSVLPLAQTYAILFATPLLITLLSIPLL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A + +L +L++ P+ +A SA A +I V
Sbjct: 116 GESVGWRRGLAVCVGLLGVLVVLRPGSTPMSMGHLAGMGSAIFGALASIIVRKIGNDERS 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L P + G + I D + K + + V
Sbjct: 176 VVLLLYPMAANYIVVGALMIAVYKPMPILDVGAAALISAMGFVAGLFLIAAYKAGEATIV 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
M+Y+ L + + +D I GI++ + + +L S
Sbjct: 236 APMQYSQILWATAYGYLLFDEGVDRYTVIGAGIIIASGIYIVLRESAKS 284
>gi|15923719|ref|NP_371253.1| putative transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|15926406|ref|NP_373939.1| hypothetical protein SA0684 [Staphylococcus aureus subsp. aureus
N315]
gi|148267188|ref|YP_001246131.1| hypothetical protein SaurJH9_0752 [Staphylococcus aureus subsp.
aureus JH9]
gi|150393238|ref|YP_001315913.1| hypothetical protein SaurJH1_0770 [Staphylococcus aureus subsp.
aureus JH1]
gi|156979057|ref|YP_001441316.1| hypothetical protein SAHV_0726 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253315838|ref|ZP_04839051.1| hypothetical protein SauraC_06765 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255005520|ref|ZP_05144121.2| hypothetical protein SauraM_03595 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257794950|ref|ZP_05643929.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258418266|ref|ZP_05682531.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258421564|ref|ZP_05684489.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258430758|ref|ZP_05688470.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258441750|ref|ZP_05691022.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258445809|ref|ZP_05693986.1| integral membrane protein [Staphylococcus aureus A6300]
gi|258449620|ref|ZP_05697722.1| integral membrane protein [Staphylococcus aureus A6224]
gi|258454020|ref|ZP_05701992.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|269202348|ref|YP_003281617.1| integral membrane domain-containing protein [Staphylococcus aureus
subsp. aureus ED98]
gi|282894496|ref|ZP_06302725.1| hypothetical protein SGAG_01845 [Staphylococcus aureus A8117]
gi|282926593|ref|ZP_06334223.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|295406450|ref|ZP_06816256.1| hypothetical protein SMAG_01615 [Staphylococcus aureus A8819]
gi|296275138|ref|ZP_06857645.1| integral membrane domain-containing protein [Staphylococcus aureus
subsp. aureus MR1]
gi|297245176|ref|ZP_06929050.1| hypothetical protein SLAG_01268 [Staphylococcus aureus A8796]
gi|13700620|dbj|BAB41917.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246498|dbj|BAB56891.1| putative transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|147740257|gb|ABQ48555.1| protein of unknown function DUF6, transmembrane [Staphylococcus
aureus subsp. aureus JH9]
gi|149945690|gb|ABR51626.1| protein of unknown function DUF6 transmembrane [Staphylococcus
aureus subsp. aureus JH1]
gi|156721192|dbj|BAF77609.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257788922|gb|EEV27262.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257839059|gb|EEV63538.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842490|gb|EEV66914.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257849430|gb|EEV73400.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257852219|gb|EEV76146.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257855385|gb|EEV78323.1| integral membrane protein [Staphylococcus aureus A6300]
gi|257857128|gb|EEV80027.1| integral membrane protein [Staphylococcus aureus A6224]
gi|257863885|gb|EEV86641.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262074638|gb|ACY10611.1| integral membrane domain-containing protein [Staphylococcus aureus
subsp. aureus ED98]
gi|282591486|gb|EFB96558.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282763209|gb|EFC03340.1| hypothetical protein SGAG_01845 [Staphylococcus aureus A8117]
gi|285816431|gb|ADC36918.1| Integral membrane domain protein [Staphylococcus aureus 04-02981]
gi|294968595|gb|EFG44618.1| hypothetical protein SMAG_01615 [Staphylococcus aureus A8819]
gi|297177847|gb|EFH37096.1| hypothetical protein SLAG_01268 [Staphylococcus aureus A8796]
gi|312829221|emb|CBX34063.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129410|gb|EFT85403.1| hypothetical protein CGSSa03_00375 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329724590|gb|EGG61097.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21172]
Length = 288
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 102/290 (35%), Gaps = 7/290 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F +
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFLY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L VFL
Sbjct: 56 HQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSSREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + + L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I Y + + + + + D T+ + +++ A Y+ K
Sbjct: 236 IFTYASIIFTAILGFVLFGESPDFYATLGYVVIIGASY-YMFEKARRDAK 284
>gi|170721414|ref|YP_001749102.1| hypothetical protein PputW619_2233 [Pseudomonas putida W619]
gi|169759417|gb|ACA72733.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
W619]
Length = 292
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V A L+ ++FL + + ++ + ++ L
Sbjct: 11 NHPLRGIALVVVATFLFASHDALSKFLGGLYPIIMVVW-----ARYLVHTLLMAGIFLPK 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + A L F L + F+ PV+ L + LK
Sbjct: 66 SGLNVLRTRRPVLQTLRALSLLSTSLLFTTGLQYLPLAEATSVNFLAPVLVTALSAPLLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A +L + +L++ G + SA F +
Sbjct: 126 ERVTPGQWVAVVLGFIGVLVVVHPGGAMFTPAILYPFGSALGFCFYQLLTRILAAHDSPT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + L L ++ G + + + A + +
Sbjct: 186 TSNFYAGLCNTLVMSALVPFFWELPRWDHALLMLALGGFGMSAHLLLTQAFRHAAPALLA 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I Q D+ + I+ ++ +
Sbjct: 246 PFSYCQIVFAGLLGLLIYGQVPDSTTLLGIAIICLSGLGAAWMQRRK 292
>gi|49482986|ref|YP_040210.1| hypothetical protein SAR0783 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257424849|ref|ZP_05601276.1| integral membrane protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427517|ref|ZP_05603916.1| integral membrane domain-containing protein [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257430148|ref|ZP_05606532.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432849|ref|ZP_05609209.1| integral membrane protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435753|ref|ZP_05611801.1| integral membrane protein [Staphylococcus aureus subsp. aureus
M876]
gi|282903358|ref|ZP_06311249.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus C160]
gi|282905137|ref|ZP_06312995.1| integral membrane protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908114|ref|ZP_06315945.1| integral membrane protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910373|ref|ZP_06318177.1| integral membrane protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913568|ref|ZP_06321357.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus M899]
gi|282918521|ref|ZP_06326258.1| hypothetical protein SASG_02076 [Staphylococcus aureus subsp.
aureus C427]
gi|282923487|ref|ZP_06331167.1| hypothetical protein SARG_00807 [Staphylococcus aureus subsp.
aureus C101]
gi|283957561|ref|ZP_06375014.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293509561|ref|ZP_06668272.1| integral membrane protein [Staphylococcus aureus subsp. aureus
M809]
gi|293524147|ref|ZP_06670834.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus M1015]
gi|295427306|ref|ZP_06819941.1| hypothetical protein SIAG_01841 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590342|ref|ZP_06948981.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus MN8]
gi|49241115|emb|CAG39793.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272419|gb|EEV04542.1| integral membrane protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275710|gb|EEV07183.1| integral membrane domain-containing protein [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257279345|gb|EEV09946.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282264|gb|EEV12399.1| integral membrane protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257284944|gb|EEV15063.1| integral membrane protein [Staphylococcus aureus subsp. aureus
M876]
gi|282314355|gb|EFB44745.1| hypothetical protein SARG_00807 [Staphylococcus aureus subsp.
aureus C101]
gi|282317655|gb|EFB48027.1| hypothetical protein SASG_02076 [Staphylococcus aureus subsp.
aureus C427]
gi|282322600|gb|EFB52922.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus M899]
gi|282325765|gb|EFB56073.1| integral membrane protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327779|gb|EFB58061.1| integral membrane protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331962|gb|EFB61473.1| integral membrane protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596313|gb|EFC01274.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus C160]
gi|283791012|gb|EFC29827.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290921110|gb|EFD98171.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus M1015]
gi|291467658|gb|EFF10173.1| integral membrane protein [Staphylococcus aureus subsp. aureus
M809]
gi|295128694|gb|EFG58325.1| hypothetical protein SIAG_01841 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297576641|gb|EFH95356.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus MN8]
gi|312438847|gb|ADQ77918.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|315194348|gb|EFU24740.1| hypothetical protein CGSSa00_11485 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 288
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 102/290 (35%), Gaps = 7/290 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L VFL
Sbjct: 56 HQPMFGKLSSQPLLLTRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + + L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFTAYTYEPMSQTQVLYLLGAGLAAAVGQIGVTLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I Y + + + + + D T+ + +++ A Y+ K
Sbjct: 236 IFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASY-YMFEKARRDAK 284
>gi|332970570|gb|EGK09557.1| DMT superfamily drug/metabolite transporter [Psychrobacter sp.
1501(2011)]
Length = 332
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/304 (16%), Positives = 112/304 (36%), Gaps = 2/304 (0%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVL--WSLPGVFFAI 71
+ ++ ++G L + L+G Y+ L+ ++ +V R+L W F I
Sbjct: 19 TASDDQQRTMILGVLLAVISNFLFGALYFYSNLLQPLTGTQVFIWRMLSMWVALIGFLVI 78
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
G + LK PK L+ I F++A + QG + YF+ P++
Sbjct: 79 RGRLGYHLNIIGQLKTPKQWAWLLLPTPIFFSQLWLFMWAPVNGQGVQVAMGYFLFPLMM 138
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
V G +F ERL+ LQ +A ++ + + + + + + +
Sbjct: 139 VLFGYLFFGERLSKLQWLAVGFAMIGIGMEIARTQSVSWATLWVCGTYPIYYIMRRLQGI 198
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ + L +P + F G+ L + G+L+
Sbjct: 199 TAMTGMLVDLTLFLPIALAYLLFIAPENLAFVSGSGLYMLLVASLGILSVVALKTNIDAS 258
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ G++ Y P+ + ++ +L + +G++ I ++ + + N
Sbjct: 259 QILPVNVFGMLSYLEPVFLFFLAITVLGDSFEPGMLYSYGLIWIGIMFLIAHGIRQIRAN 318
Query: 312 KTKK 315
+ K
Sbjct: 319 RRNK 322
>gi|254229222|ref|ZP_04922641.1| sugar transport protein [Vibrio sp. Ex25]
gi|262395572|ref|YP_003287425.1| permease [Vibrio sp. Ex25]
gi|151938307|gb|EDN57146.1| sugar transport protein [Vibrio sp. Ex25]
gi|262339166|gb|ACY52960.1| permease [Vibrio sp. Ex25]
Length = 301
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 93/300 (31%), Gaps = 16/300 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + +G F+ + + + + L + V E+++ R L SL + +
Sbjct: 2 SNSFNTLVPIGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDV-- 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
K +L + + Y++ T + ++ PV +
Sbjct: 60 ------KRKRISVWGNNKPLLFARGAVGTMALMCVYYSVTTLPLAEATIFQYIHPVFTAL 113
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKT 187
L FLKER+ + L +L + IM + + A+ +
Sbjct: 114 LAVFFLKERIQPSTFLCIALCLLGIYIMVSPETGQEAERTLPMFSVMIAILGAFGSSIAY 173
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ V ++ L + + G+ F + ++ T L+ G+
Sbjct: 174 VIVRKLSQTEDSSVIIFYFPLVALPASLLLIGDDFVMPDLYLTFMLVLVGVFTQVGQLGL 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ + Y + ++ + + I ++V ++ + +
Sbjct: 234 TKAMQTQQAGKASAYSYIQIVFSVLLGIIFFGEIPLIWTYIGGALIVAGALINVFGHHLR 293
>gi|18309113|ref|NP_561047.1| hypothetical protein CPE0131 [Clostridium perfringens str. 13]
gi|18143788|dbj|BAB79837.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 297
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 87/291 (29%), Gaps = 6/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A + L ++ V+ + + + V F I Y G
Sbjct: 2 NSKFKGIIFMILASAAFATMNLLSKLAVGVNSYQKTFLTNVVATLIVCFIIAYKKGSFFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K++ K + YAL + + P ++ + +
Sbjct: 62 KKESRKYLLVR------GVTGTLSILTNYYALDKMFLSDATILTKLAPFFTIIFSYLLIS 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q ++ L + + ++ SA +
Sbjct: 116 EKITKKQFTLLIVAFAGSLFVIKPQFSTAIIPSLIGVASAAFAGIAYTMIRVIGDKEDFW 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + S + + + L L+ G+ + + K A S +
Sbjct: 176 TIILSFTSIATIVMLPSMFMNTDNLTLQNILLLVSAGIAFTLGQVALTIAYKNAPASEIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +Y ++ + K+ D + + I+V + ++ +L S K
Sbjct: 236 MYDYIGLIIAAIYGFMFFKEIPDFLSFTGYIIIVGSSILNILGNKKTSTKE 286
>gi|332886128|gb|EGK06372.1| hypothetical protein HMPREF9456_00246 [Dysgonomonas mossii DSM
22836]
Length = 293
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/290 (10%), Positives = 89/290 (30%), Gaps = 2/290 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + +G+ ++ L + + ++ +R L + + +
Sbjct: 1 MSKSKGIALALISSGTFGLIAFFSIPLLKSGMHIPSILFYRSLLAAAFLGIVCLIRKRNF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +G+L ++ ++ FI + + +I + +
Sbjct: 61 RISPKLATQLLFLGLLYTMTSMGLIYSYNFISSGVATTIHFLYPVVVACMMIIFYKEKLS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + ++ +++ L L T+SAY + + S +
Sbjct: 121 RNLLFAAFLALVGVALLCWSDTGFINTRGLLSVLMTVFTYSAYIVSLNRNSIKSLDPEVF 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+ A + V++ F+ G + + +K A +
Sbjct: 181 TFYVMLFGAFIFSVFSYFTTGIEIVPNAMSWFNLIGLALFATVLSGLALVSAVKYAGSTI 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ P++ + + +P +V+ A+ + ++ + S
Sbjct: 241 TSILGSMEPVVATLVGILHFGEPFGWNSFFGLALVIGAVTLVIVTSKEKS 290
>gi|295402012|ref|ZP_06811973.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
gi|312110959|ref|YP_003989275.1| hypothetical protein GY4MC1_1907 [Geobacillus sp. Y4.1MC1]
gi|294975903|gb|EFG51520.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216060|gb|ADP74664.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y4.1MC1]
Length = 314
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/308 (11%), Positives = 82/308 (26%), Gaps = 17/308 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +F +WG + + + + + V R + +F + +
Sbjct: 1 MKTSKIKTYALLFLTTTIWGGAFIAGKIATESLHPVAVAFFRFFGASLILFPLMWW---- 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + T + ++ F A +S V + ++
Sbjct: 57 KEPKQPVPTKKDWGMFALLGLTGIFLYNICFFIATKYAPIVKSSLVIAVNAPLITLFSAI 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------------VTWSAYCFAR 185
FLKE ++ I+ + + L + + + ++ +
Sbjct: 117 FLKEEISWKDILGVITALFGALYIITNGQLSVILELGFAPIDLVLISACLSWSIYSVIGK 176
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ S L + S G L ++++ F
Sbjct: 177 VVMKKYSPLTATTYATGFGTILLSPLAIYYTSLNSIKSSGWEVWLSVLYVAIIVSAISFV 236
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ GI+ ST + P+ V +P+ I V ++ +
Sbjct: 237 WWYRGIQNVGASTASVFINVMPISATVMGTVFFHEPLTITHGIGALFVFSGILFMIYSNY 296
Query: 306 INSGKNKT 313
K K+
Sbjct: 297 SKQNKEKS 304
>gi|322418247|ref|YP_004197470.1| hypothetical protein GM18_0713 [Geobacter sp. M18]
gi|320124634|gb|ADW12194.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M18]
Length = 308
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/295 (10%), Positives = 87/295 (29%), Gaps = 13/295 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ T ++ + WG + ++ + ++ + + +R + + +
Sbjct: 10 RSSKATFWLILTTLFWGGSFIFNKIGFREIPPVTFLFYRFALATLLMGLLCL-------- 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ N + LA F+ + F + ++ L VF +
Sbjct: 62 PRLKRFNWATCRTGLLVGLALAATNLCFVLGVSGTSVSRAGFLNNLFVLLIPLLCFVFWR 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS----EGF 196
ERL+ +L + L ++ + T A A I V + +
Sbjct: 122 ERLDRWSAAGLVLALAGLWLLARGGVDGFNKGDLLSTLCALFIALHIISVSKLLRDEDIY 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ A V + + + + F + + +
Sbjct: 182 LLSFVQFATVTAVGGVLDLLLPSAPLSVTWVSLGSLIYCAIFPTVICFTLQNTYQRYTTP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ G++ P+ ++ +L + + ++ A+V+ L + ++
Sbjct: 242 TKAGLIYTMDPVWSMLGGTLLLGERLTADEWTGCALIFAAVVLPLTVKRLRERQS 296
>gi|3169320|gb|AAC17852.1| YojD [Bacillus subtilis subsp. subtilis str. 168]
Length = 263
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 121/259 (46%), Gaps = 3/259 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G ++ ++I+WG+ PLY + LEQ+ L++++HR++WS + + +
Sbjct: 5 ETKKGVIYTAVSFIMWGLFPLYWKLLEQLPALDILAHRIIWSFVFMCIVLFFLRQWKIGW 64
Query: 82 K--DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +LK + L ++ +++++W +I+A+ S Y++ P++SV LG +FL
Sbjct: 65 QELRSLKKNGGILSLFLASILISINWFVYIWAVNHGFLLEASLGYYINPLVSVLLGILFL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+LN LQ++A + ++I G + +A+ + +S + +
Sbjct: 125 KEKLNRLQLVAVSIAAAGVIISAFQYG-SIPYVALLLAFSFGLYGLSKKRTSLPSAIGLT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ I + + + L L G+ + +F+ G KR L V
Sbjct: 184 LETFMIMPIALGYLLFSGHVQPAGAESGGTWLLLFLAGVFTALPLLLFAEGAKRLPLYQV 243
Query: 260 GIMEYTAPLLMIVSSVFIL 278
GI++Y AP + ++ +F L
Sbjct: 244 GILQYIAPTITLLIGLFCL 262
>gi|126463406|ref|YP_001044520.1| hypothetical protein Rsph17029_2646 [Rhodobacter sphaeroides ATCC
17029]
gi|126105070|gb|ABN77748.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17029]
Length = 318
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 99/305 (32%), Gaps = 14/305 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S+ + G + +++ + + V E + R +++P +F + +
Sbjct: 12 SMHPLRGIGLKVASVLIFIVMSALIKATSDRVPAGEAVFFRSFFAMPVIFVWLAWRHELR 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ LK V+ + + G L + + P+++V ++F
Sbjct: 72 TGLKAV-----NPMGHVWRGVVGTMAMGLGFAGLAYLPLPEVTALGYAAPLLTVIFAAMF 126
Query: 139 LKERLNHLQIIAALLIILSL--------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L E + +I A L ++ + +++ G A V A + +
Sbjct: 127 LGEEVRAFRISAVALGLVGVLIVLSPRLTVLSGGMGHREAFGAALVVGGAVFAGLAQVFI 186
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ +L + + + + + LIG G+L + +
Sbjct: 187 RKLVHTEATSAIVFYFSLTATLLSFVTLPFGWVWPTPAEAALLIGAGVLGGVAQILLTSA 246
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A S V EY + + ++ + V +VV A ++ + +
Sbjct: 247 YRFADASLVAPFEYASMIFALLIGYLAFDEVPTLVMLGGASLVVAAGILIIWRERRLGLE 306
Query: 311 NKTKK 315
++
Sbjct: 307 RARQR 311
>gi|163814326|ref|ZP_02205715.1| hypothetical protein COPEUT_00477 [Coprococcus eutactus ATCC 27759]
gi|158449961|gb|EDP26956.1| hypothetical protein COPEUT_00477 [Coprococcus eutactus ATCC 27759]
Length = 312
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/309 (10%), Positives = 88/309 (28%), Gaps = 18/309 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +L + +WG+ + + V R L + I
Sbjct: 1 MKSRQVRNSLLLVLTAFIWGVAFVAQRQGGDTVGPFSFNGIRSLIGGAVLIPVIFIIDRI 60
Query: 78 LSLLKDTLKNPKAVGMLV---FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ L +++ T+L + L + ++ V +
Sbjct: 61 KPSDRKPLNRSDRKRLVIGGICCGTVLFLASSAQQLGLYMGTPAGKAGFLTACYILLVPI 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
S+FLK++ + ++ ++ L ++ + + S + + A FA + +
Sbjct: 121 LSLFLKKKCGWNIWLGIVIAVVGLYLLCMSGSLSFQSSDLMMLVCALLFAGHILVIDHFS 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN--------------IPDTLFLIGYGLLN 240
+ + I + + F + L L
Sbjct: 181 PLVDGVRMSCIQFWVCGILSIFPAFFSEMHHSVAGIAAWVQPLGTLSAWIPILYAGVLSC 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + G + ++ + +++ IL + + + G++ A+++
Sbjct: 241 GVAYTLQIVGQNGLNPTVASMIMSLESVFSVIAGWLILGEKMGGRQLAGCGLIFAAILLA 300
Query: 301 LLPTVINSG 309
+P
Sbjct: 301 QIPAGREKK 309
>gi|126735113|ref|ZP_01750859.1| hypothetical protein RCCS2_14589 [Roseobacter sp. CCS2]
gi|126715668|gb|EBA12533.1| hypothetical protein RCCS2_14589 [Roseobacter sp. CCS2]
Length = 300
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/295 (10%), Positives = 95/295 (32%), Gaps = 8/295 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
K + ++G L++ +++ + + + V + R + L + I
Sbjct: 2 KAQSHSRPIVGILWMLFTGLMFVAVTAVVKHVGDDVPAAQAAFLRYVLGLVFLIPMI--- 58
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + + + +A+ + +++PV
Sbjct: 59 ----KPILAAHLTGRQKKLFWARGLVHTLAVILWFFAMARIPIAEVTAMNYLSPVYVSLG 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++FL ERL ++ A ++ ++ +I+ + IA+ +A CFA +
Sbjct: 115 AALFLGERLPPRRLAAVIIALIGAMIILRPGVKEVELGHIAMLGTAVCFAAGYLIAKQLS 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G V+ + ++ V + +P +L + + A
Sbjct: 175 GEVSAPVVVGMLSITVTVGLAPFAWAVWVTPTLPQLGWLFLVACFATAGHYSMTLAFAAA 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
L+ + + + ++ + + +D +++ ++ +
Sbjct: 235 PLTVTQPVTFLQLVWAVLLGAIVFGEAVDGWVIFGGAVIMASVSFITWREAVARR 289
>gi|83859201|ref|ZP_00952722.1| hypothetical membrane protein [Oceanicaulis alexandrii HTCC2633]
gi|83852648|gb|EAP90501.1| hypothetical membrane protein [Oceanicaulis alexandrii HTCC2633]
Length = 314
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 91/294 (30%), Gaps = 10/294 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ ++S + G + + ++ G + + + + R+ LP + A+++
Sbjct: 1 MTASSSSRTPIPGVAVLAVSAVVLGFASILVKA-SDLGPQAIAFWRLSLGLPLLALALIH 59
Query: 74 -FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + P L + A F+ + + +TP++
Sbjct: 60 GLRKQRRAGRPFILRPPGWKALALAGVFFAGDLAFWHAGIKITTAANATLLANLTPILVA 119
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFA 184
+ER ++A L IL + + + +LS AV ++ Y +
Sbjct: 120 IAAWFLFQERPTRGMVLAGALAILGAVCLAAGNVRFAPERVSGDILSALTAVWYTGYLLS 179
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + + A ++ L +++
Sbjct: 180 IRAARRAGAATVEVMFWSAFVGAPIALLIALGFNEPLLPPEPSDWWPLLALALIVHVGGQ 239
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+YG+ + ++ P++ + + + ++ V+I +
Sbjct: 240 GGVAYGLGHTPAALATLIILIQPVVSALVGWILFGEAFTPLQWAGAAFVLIGVY 293
Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 28/77 (36%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
L G+ + + GIK + ++ P+L+ +++ F+ ++ +
Sbjct: 78 WKALALAGVFFAGDLAFWHAGIKITTAANATLLANLTPILVAIAAWFLFQERPTRGMVLA 137
Query: 290 FGIVVIAMVVYLLPTVI 306
+ ++ V V
Sbjct: 138 GALAILGAVCLAAGNVR 154
>gi|288928391|ref|ZP_06422238.1| integral membrane protein domain protein [Prevotella sp. oral taxon
317 str. F0108]
gi|288331225|gb|EFC69809.1| integral membrane protein domain protein [Prevotella sp. oral taxon
317 str. F0108]
Length = 307
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/302 (11%), Positives = 88/302 (29%), Gaps = 14/302 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
+++ ++ ++ + F +WG T + T+ L +S + + R L + +
Sbjct: 1 MTRPTSTHANLLYHVVAFVTVAIWGSTFISTKLLIYAGLSPAHIFTLRFLIAYVLMLGFT 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILA-VHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ K N G ++ + AL S P+
Sbjct: 61 LVGPRRAGGRKLLCNNLSDEGCMMLLGITGGSAFFLMQNEALRFSTATNVSLIVCSCPLF 120
Query: 131 SVFLGSVFLKER-----------LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS 179
++ L + + + + + A +L +L ++ L +A +
Sbjct: 121 TMVLMRLLVHGTRLGTLQVAGTLFSFVGMAAVVLNGKFVLHLSPLGDFLALCACLAWAFY 180
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
+ R S + L Y + H L L
Sbjct: 181 SIIMKRMNERYDSLFITRKVFFYGLLTMLPYYILVPQMPPLHALTRPDVIGHLLFLGVLG 240
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ F +++ + + Y P+ IV + +L + I +++ + +
Sbjct: 241 SMICFLTWTWVMGKLGAMRATNYIYVNPITTIVFAWLVLHETITPYFIAGTVFILVGLFL 300
Query: 300 YL 301
Sbjct: 301 SS 302
>gi|239831460|ref|ZP_04679789.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823727|gb|EEQ95295.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 351
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 93/298 (31%), Gaps = 14/298 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M+G + ++ + + V V ++I R +++ + + +
Sbjct: 47 ETNPMLGIGLKIASVAVFVAMSTLLKATDGVPVGQLIFFRSFFAIFAILLYLAWRGQLSG 106
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + +AL + +P+ISV LG+V L
Sbjct: 107 VFRTQNG-----FSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLISVILGAVVL 161
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A L+ + + + G A+A A A + V
Sbjct: 162 HEVVRLYRWSAVLIGLGGVTFILWPRLTVFSGGDIGFEEAVGALAALGGAVMSAVAMMLV 221
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ ++ V + S + + + P LIG G + +
Sbjct: 222 RHLVQTERTSTIVIYFSISASVISLASFPFGWIVPSWPQLAMLIGAGFAGGVGQILLTEC 281
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ A +ST+ EYT+ LL + + IV+ A + S
Sbjct: 282 YRHAPMSTIAPFEYTSMLLGLAIGFLLFGDIPTLEMLAGSAIVMAAGGFIIYREHKLS 339
>gi|206560785|ref|YP_002231550.1| hypothetical protein BCAL2426 [Burkholderia cenocepacia J2315]
gi|198036827|emb|CAR52727.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 309
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 88/290 (30%), Gaps = 16/290 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S + G L+V + +G ++ ++ V VL ++ R +
Sbjct: 7 PSSAALQGALYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGAVLAAIA----- 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A + AL Q L + ++ P L +
Sbjct: 62 -RQRRVAWPRGRSLAPLVTMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ERL + +A +L + +M L +A+A+ + ++ G
Sbjct: 121 WWLGERLTRAKAVALVLCVAGSALMVGGGHGEPLGIALALAAAVIYSLYIVGGTKATRGV 180
Query: 197 FIEMCVLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I A+ V F + L + F
Sbjct: 181 DPLATTAIICLSASATLVAIAVVRTAAFGAPPRWPATAGGWASMLAIALISTVAAMLAFF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G+ R + ++ P++ + + + + + ++ ++ A++
Sbjct: 241 AGLARLGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVL 290
Score = 39.5 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 27/82 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRSLAPLVTMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPT 304
+ + + V + +
Sbjct: 128 TRAKAVALVLCVAGSALMVGGG 149
>gi|196039593|ref|ZP_03106898.1| YdzE [Bacillus cereus NVH0597-99]
gi|229094212|ref|ZP_04225291.1| Transporter [Bacillus cereus Rock3-42]
gi|196029753|gb|EDX68355.1| YdzE [Bacillus cereus NVH0597-99]
gi|228689204|gb|EEL43026.1| Transporter [Bacillus cereus Rock3-42]
Length = 292
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 99/294 (33%), Gaps = 15/294 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G+L++ A +WG + + L + LE++ R L ++ +
Sbjct: 2 KNTLLGSLYLILASSIWGGMYVVVKVLVSVIPPLELVWLRYLVAIVALLIIGFVTKQKWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + ++ A+ + + + TP V + L
Sbjct: 62 IEK-----RYFLIIITIGVIGYAISIVTQETGTMLSSAQMGAVITSSTPAFMVLFAWLIL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
KE L + I+ L + ++I+ GI LL A+ + R
Sbjct: 117 KEHLTFKKGISVCLATIGVIIIVGIGDLNTSSVLGGISLLIAALTWALMSVLVKRLPSDY 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
V I +V+ + L + + F +++ G
Sbjct: 177 SQIVVTTYSTLVALIVLTPFVLPRLHAIDISQLTRPTIWGGLLYLGIISTAVAFLLWNRG 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ S+ G+ + P++ + IL + I + + +++I +++ +
Sbjct: 237 LQMLNASSGGLFFFFQPVVGTLLGWLILGEKIGVMFWVGSALILIGVLLVIREK 290
>gi|91978360|ref|YP_571019.1| hypothetical protein RPD_3897 [Rhodopseudomonas palustris BisB5]
gi|91684816|gb|ABE41118.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisB5]
Length = 345
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/285 (10%), Positives = 79/285 (27%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + + R W+ + A + ++ K
Sbjct: 55 YLLLSLTSLFWAGNAIVGRAAAGHFPPVTLSFLR--WAFAFLLVAPFAWRHLIADWKVIR 112
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + + ++ AL P+ + L RL
Sbjct: 113 KHLVVMVAISIIG--ISTFNTLQYTALQYTTALNILLLQSTAPLFVAIWALIVLGARLTL 170
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + + + ++++ LH L+ + T+ Y + P +
Sbjct: 171 TQALGIMASMAGVVVIILHGDLAQITAIDLNRGDLMFIGALATFGLYTTLTQRRPAMHAL 230
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F L ++ + L + + ++ G++
Sbjct: 231 SFLAFTFGCGALFLIPLLIWELTVRPAPALDVANAASLAYVVIFPSILAYLCYNRGVRLI 290
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ L + I + +V+ +VV
Sbjct: 291 GANRSAPFFHLIPVFGSAMAILFLGEQPHLYHAIGYAMVLAGVVV 335
Score = 36.0 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 40/131 (30%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + A G + A L + + + + +
Sbjct: 60 LTSLFWAGNAIVGRAAAGHFPPVTLSFLRWAFAFLLVAPFAWRHLIADWKVIRKHLVVMV 119
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ S + ++ + +++ TAPL + + ++ +L + + +
Sbjct: 120 AISIIGISTFNTLQYTALQYTTALNILLLQSTAPLFVAIWALIVLGARLTLTQALGIMAS 179
Query: 294 VIAMVVYLLPT 304
+ +VV +L
Sbjct: 180 MAGVVVIILHG 190
>gi|258406505|ref|YP_003199247.1| hypothetical protein Dret_2387 [Desulfohalobium retbaense DSM 5692]
gi|257798732|gb|ACV69669.1| protein of unknown function DUF6 transmembrane [Desulfohalobium
retbaense DSM 5692]
Length = 303
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 97/308 (31%), Gaps = 16/308 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
++ P+++ TL + A LWG + + + L + R+ S
Sbjct: 2 QKTTFSPSVLPTLALLGAVFLWGSSFSAMKVAVAAFGPLFTVWSRMCISTALFVPL---- 57
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
LLK+ +L+ + +++ +A+ V P++
Sbjct: 58 --SWKLLKNGGPGRDWGWILLVAIFQPCLYFLCEGFAVHYTTSAQAGMVSAVLPLLVAAG 115
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCFAR 185
+ LKE I L L ++ +TL S + A+ +A
Sbjct: 116 AHLVLKETSGPGIWIGGGLSCLGVVWLTLASSPSATAPNPFLGNTLEFAAMLSAAGYMLT 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
G + + ++ LF++ + P L L L+ F
Sbjct: 176 VRRLAGRYSSWLLTGLQFSLGVLFFLPGGMQGPSGGWPETVWPYLLLLYLGALVTLGAFN 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++++GI R P+ V L + + T + +V+ + + +
Sbjct: 236 LYNWGIARVPAGRAATFVNLVPVTAAVLGALFLDEVLSTSQIAASILVLAGVALAQSTFL 295
Query: 306 INSGKNKT 313
+ + +
Sbjct: 296 ERTARRQR 303
>gi|148266413|ref|YP_001233119.1| hypothetical protein Gura_4403 [Geobacter uraniireducens Rf4]
gi|146399913|gb|ABQ28546.1| protein of unknown function DUF6, transmembrane [Geobacter
uraniireducens Rf4]
Length = 305
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 95/297 (31%), Gaps = 11/297 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+N+ + ++ +LWG + ++ + ++ + + R L + + +
Sbjct: 6 DNSPVSNGKALFWLVVTTVLWGGSFVFNKIGFREIPPVMFLFLRFLLATIVMGLICI--- 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ N + + LA F+ + F + +I L
Sbjct: 63 -----PRLRQVNLEIIKKGGLLGMALAAANLSFVIGVNGTTVTRAGFLNNLFVLIVPLLC 117
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +++++ L L + + L I + A + + S
Sbjct: 118 FIIWRDKVDRLTFAGIFLAAFGIGGLASGGGFSHGDLYSTICALFIAIHIIAVSRLLRSG 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + A + + F +G + L F + + +
Sbjct: 178 DVYLVTLSQFATVTAIGGILTVILPEQPFHIGPVSAGALLYCAIFPTVICFTLQNTFQRY 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ G++ P+ ++ +L + ++T + G++ A+ V LL + +
Sbjct: 238 TTPTRAGLIYTLDPVWSMLGGFVLLGERLNTREWLGCGLIFGAVAVPLLVKLSIERR 294
>gi|291561373|emb|CBL40172.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[butyrate-producing bacterium SS3/4]
Length = 297
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 83/297 (27%), Gaps = 11/297 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFA 70
++ +G L WG++ ++ L V V + R+ + + F
Sbjct: 1 MTDTKDKKREKLGILCCTAGATSWGLSGTCSEALFSQYPVDTTWVTAVRMTSAGIILLFL 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
L+L + + +++F+ LA+ ++ A+ + ++ V
Sbjct: 61 AFA-KHSLNLKELGKDKKGLIEIVLFAIAGLALCQYAYLSAIKWTNSGTATVIQNLSIVF 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCF 183
+ + + + +L + + ++ + + A +
Sbjct: 120 IAVYVCLTTRTAPDKRTVFCIILALFGVWLLATGGKPGNMELTPRGLFWGLMAGIGAASY 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + G + + S L + L
Sbjct: 180 SLLSRAPVKHRGSIPVSGMGMFIGGLALSLIAQSWKIPAGLDGRAILYMAVIVLLGTVGA 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F +F GI ++ PL SV L I F ++ +V+
Sbjct: 240 FTLFLQGIALVGPVKAALLSCLEPLTAATLSVVWLHSSFSPTDLIGFACILATVVLM 296
>gi|254559553|ref|YP_003066648.1| hypothetical protein METDI1008 [Methylobacterium extorquens DM4]
gi|254266831|emb|CAX22630.1| conserved hypothetical protein, DUF6; putative integral membrane
protein [Methylobacterium extorquens DM4]
Length = 313
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 86/296 (29%), Gaps = 10/296 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + A + + + L V L R ++ V I
Sbjct: 18 RRLVGIALMCVAPVFFASLDGTGKVLAGAGVDPLLTTFMRYAVNVALVTALI------NP 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + + + + +L AL + Q T F P+ L L
Sbjct: 72 VTRPGVAHSRRLPLQILRSLLLFGSTACNFLALRSLQLAETISIQFAAPLTVALLAGPLL 131
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++ A + +L++ + + + C+A I
Sbjct: 132 GEWSSRMRLAAVAAGFVGVLVIVRPDALAAKPAILFSLGAMLCYAVYVIVTRKLAAHDST 191
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + + + LI GL + + RA S
Sbjct: 192 ATTVFYTGLGGLAVMSPLLPWIWTAPASGTVWALLIAVGLFGTIGHWLLVLAHARAPASL 251
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKT 313
+ YT L ++ + + GI+V + + ++ +
Sbjct: 252 LAPFIYTQILWSVLLGYLLFGDVPSAWTMLGAGIIVASGLALLSEDALMRRHARRR 307
>gi|254456549|ref|ZP_05069978.1| integral membrane protein, putative [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083551|gb|EDZ60977.1| integral membrane protein, putative [Candidatus Pelagibacter sp.
HTCC7211]
Length = 318
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 89/312 (28%), Gaps = 28/312 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGG 77
A G L + A L+ + +F+ + S L E+ R + +FF I +
Sbjct: 3 AKDNNSKGILLIIIAMTLFAMQDSLIKFIFEKSALYEIFFGRYFVAAVLLFFYIKFKKQ- 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + F +L + +F P
Sbjct: 62 -----KVNLKTHYPVLTFVRVILHFLAFSAFFISLTYMPLATANALFFSCPFFVSIFAKF 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKE + + A L + I+ + ++ A+ +A +
Sbjct: 117 FLKEYIGIRRWSAIAFGFLGVFIVLNPNFSEFEYKSLLPVGCAFFYAASMTITKYTSDKD 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEH--------------------FFLGNIPDTLFLIGYG 237
L L + G +F F++ +G
Sbjct: 177 DVNTQLFYFYLIAIALCGLIYIYMGNGQFNNANYDSTTQFIFREWFSNIEYTWKFILFFG 236
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IA 296
+ S F A S V + EY+ ++ ++ F+ + T I ++
Sbjct: 237 VAASIAFVCIFSAYIIASPSVVSLFEYSLIIMSMIPGYFLFNEIPSTRTFIGVACIISAG 296
Query: 297 MVVYLLPTVINS 308
+ +Y V
Sbjct: 297 IYIYSREKVREQ 308
>gi|33593280|ref|NP_880924.1| hypothetical protein BP2284 [Bordetella pertussis Tohama I]
gi|33563655|emb|CAE42558.1| conserved hypothetical integral membrane protein [Bordetella
pertussis Tohama I]
gi|332382689|gb|AEE67536.1| hypothetical protein BPTD_2244 [Bordetella pertussis CS]
Length = 316
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/311 (11%), Positives = 89/311 (28%), Gaps = 14/311 (4%)
Query: 9 EYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPG 66
++ LS + G +L+ + +F + + +I+ R+L+++P
Sbjct: 2 NRNRQLSDPSRFSGMAAGFFMATLGAVLFSGKAIVVKFTYRYGIDAVTLIAFRMLFAMPF 61
Query: 67 VFFAIVY-FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ L + + + L L F
Sbjct: 62 FAAVAWWQARRAARGELPVLSWRERGQLCALGLLGYYLSSFLDFLGLRHITAGLERLILF 121
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH-----------SGIPLLSLAI 174
++P + V L + +LK + Q A LL + + ++ H
Sbjct: 122 LSPSLVVLLSAWWLKRPVTRRQWGAMLLSYVGVALVLSHDLSQSGAGADVLTGSFFVFCS 181
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
A+++S Y + + +L + + +I
Sbjct: 182 ALSYSVYLICSGELVERVGATRLVTYAMLVSCVASLIQFFLIHPASVLVQPAAVYGYSVI 241
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ + + + T ++ P+ ++ + + L +PI + +V+
Sbjct: 242 HATVNTVLPVFMLMWAVALVGAPTASLLGMVGPVSVLFLAAWFLDEPITVWQLAGTALVL 301
Query: 295 IAMVVYLLPTV 305
+ V
Sbjct: 302 AGVFVLAGRRR 312
>gi|294626041|ref|ZP_06704650.1| integral membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664646|ref|ZP_06729982.1| integral membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292599643|gb|EFF43771.1| integral membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605581|gb|EFF48896.1| integral membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 302
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 97/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + L++ + + +G+ + + ++ E+ R + L + I+
Sbjct: 2 TPAQASRRAALWMLTSTVAFGLMAITIRLASSTIATAEIAFFRNAFGLLTLLPLILRPGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 62 PLPRTRQLPR-------YFARTLIGLASMLCGFWAIGHLPLSQAISLSYSTPLFVTVLAV 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V+L E++ + +A + +L++ + +A A I +
Sbjct: 115 VWLHEQVRLRRWLAVAAGFIGVLVILRPGSSTFTPGLLIALLAAVISAIVAIQIKQLSRS 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + D ++L+ G+ + ++ +K ++
Sbjct: 175 DDSDTVVFYTYVFWVPMSLIPALFQWTWPQGIDWVWLVATGIFGTAGQLFWTRALKLGEV 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + + + L+ + ++ + I+ I I++ A V + + +
Sbjct: 235 SALQPISFMQLPLVALLGWWLFGEAIERHTVIGAAIIIGANVYIAHRETVLARR 288
>gi|89099511|ref|ZP_01172386.1| hypothetical protein B14911_11017 [Bacillus sp. NRRL B-14911]
gi|89085664|gb|EAR64790.1| hypothetical protein B14911_11017 [Bacillus sp. NRRL B-14911]
Length = 304
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/286 (11%), Positives = 89/286 (31%), Gaps = 16/286 (5%)
Query: 36 LWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + L+ + L + V+ R L+ ++ + + + VG++
Sbjct: 20 IWGTSFLFIKILLHDLGPEAVVFGRCLFGAAALWGISFIKREKIQWKRLPFRLLILVGLI 79
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ + + S TP+ ++ +G +F +L Q ++
Sbjct: 80 NNALPWYFISKSE-----TAISSSMASVINATTPIWTIIIGWLFFGSKLRKSQWAGIMIG 134
Query: 155 ILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ I++ +GI +S+A ++K + S + A
Sbjct: 135 FFGIFILSGFRTGDLAEGNTAGIVFMSMAAFCYGLGTHLSKKYLEGVSVLQISLFTLTSA 194
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A +I L + + ++ + +++ ++ Y
Sbjct: 195 ALASGLYTGIASPSSIPLLFAPERLGSLVILGALGSGAAYLLYYFLVQKGSPEFASLVTY 254
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P+ I F+L + I + ++ + + + +
Sbjct: 255 IVPVSAIAWGYFLLGEHIKPGMAVGLAVIFLGIYISSYKVKRVKKQ 300
>gi|269962934|ref|ZP_06177272.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832296|gb|EEZ86417.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 299
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 93/291 (31%), Gaps = 16/291 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G F+ + + + + L + V E+++ R L SL + + K
Sbjct: 11 IGVRFMVLSAFGFALMSATVKHVSLHGIPVFEIVAARALVSLVISYLDV--------KRK 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L + + Y++ T + ++ PV + L FLKER
Sbjct: 63 GISVWGNNKTLLFARGAVGTMALMCVYYSVTTLPLAEATIFQYIHPVFTALLAVFFLKER 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA------YCFARKTIPVGSSEGF 196
+ I L +L + +M P A+ + + + + V
Sbjct: 123 IQSSTFICIALCLLGVYVMVRPETGPDAEHALPMFSVMIAILGAFGSSIAYVIVRKLSQT 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L + + G+ F + ++ T+ L+ G+ + ++ +
Sbjct: 183 EDSSVIIFYFPLVALPASILLIGDQFVMPDLYLTMMLVLVGVFTQIGQLGLTKAMQTQEA 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + +V + + + ++V ++ + +
Sbjct: 243 GKASAYSYVQIIFSVVLGIVFFGELPSAWTYLGGALIVTGALINVFGQHLK 293
>gi|303234383|ref|ZP_07321022.1| putative membrane protein [Finegoldia magna BVS033A4]
gi|302494499|gb|EFL54266.1| putative membrane protein [Finegoldia magna BVS033A4]
Length = 302
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 105/296 (35%), Gaps = 4/296 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G +F + +++G TP+ + +V+ R + +P + ++ + L
Sbjct: 1 MRKARGMMFAIISALIFGFTPIMVRETLSNGSNVIMTSFLRGFFVIPFLAISLKSRNISL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K LK + + T+ ++ + ++ F VT +FL
Sbjct: 61 KVTKQELKKLILMCSIGGCITMTMLYASYQYISVGLATSIHFIFPTIVTVYSVMFLNEKM 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP--VGSSEGF 196
K + L +I+L+ + ++ + LA+A + + + + +
Sbjct: 121 TKYKFVSLIASIIGVILLANNVGGSNNFPLGMFLAVASGCTYSFYLIYMDVSGLKNMDSV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ I + ++ +G L + + L++ F I A +
Sbjct: 181 KVTFYNCTINSTMLFIFGLITGDFTLSLSRYAWIIAFVISILVSVFGTLFIQLSIVNAGV 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
ST I P+ ++ + + + D R + ++ +++++ + K K
Sbjct: 241 STYTIFSTLEPITSVILGIILFNETTDPRRLLGCFMIFMSVMILAVSMRFQERKAK 296
>gi|91786576|ref|YP_547528.1| hypothetical protein Bpro_0672 [Polaromonas sp. JS666]
gi|91695801|gb|ABE42630.1| protein of unknown function DUF6, transmembrane [Polaromonas sp.
JS666]
Length = 325
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 100/291 (34%), Gaps = 15/291 (5%)
Query: 23 TMMGTLFVFCAY-ILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G ILWG T + + + + R +++ + A+ + G ++
Sbjct: 32 RLLGIYLRLTCVPILWGGTFIAGRVISAHLPPATAGFVRFVFATLALLVALHFTQGLRAI 91
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ T + +G L AT + ++ F AL TS + PV+++ L + L
Sbjct: 92 TQVT--RGQLLGTLALGATGIFIYNLLFFTALSVLPAGRTSLIIALNPVVTLLLAAALLG 149
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG----- 195
+RL+ ++ + L +L + ++ + + ++ + A V + G
Sbjct: 150 DRLSAVRWLGVGLALLGVWVVVTRGDLSQIMQSLGKGELSMFGAVCAWAVYTLLGRKLLQ 209
Query: 196 ------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L + S + L + F +
Sbjct: 210 SLSPLLATLWAAIWGTLLLGLLALRDISSVHAGSFTPEVWAGLVFLGVLGTAVAFVWYYE 269
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI++ + + P+ ++ IL +P+ G+ + + +
Sbjct: 270 GIRQLGAARTVVFNNLVPVFGVLLGWLILGEPLSASLLAGGGLAIFGVFLV 320
>gi|22537806|ref|NP_688657.1| hypothetical protein SAG1666 [Streptococcus agalactiae 2603V/R]
gi|22534699|gb|AAN00530.1|AE014267_13 membrane protein, putative [Streptococcus agalactiae 2603V/R]
Length = 304
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/300 (14%), Positives = 104/300 (34%), Gaps = 10/300 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
GT+ A + WGI+ + Q+L V V + S R+L + + ++ L+
Sbjct: 6 KGTMMTLAAGLAWGISGISGQYLMSHGVHVNLLTSLRLLITGIFLL-SLARSKQKEHLVA 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +L+FS L ++ F+ A+ + ++ P++ + + + ++R
Sbjct: 65 AWKQPKFLKQVLLFSIFGLVLNQYAFLRAIHLTNAGTATVLQYMAPILILSIVCILNRQR 124
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+IIA + IL ++ H L + + + + + G
Sbjct: 125 PTSFEIIAIAMAILGTYMIATHGKLGSLAITPKGLMWGLGSAITYSIYILLPVKLIHEWG 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + + + ++ G+ F + F G+
Sbjct: 185 STIVIGSGMFIGGILFSLVTKAWQYPLQINVMSILAYIGIIGIGTIFAYTFFLKGVSIVG 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ P+ + +V +L + + + + +A+ + +I K K +
Sbjct: 245 AVKGSLLASVEPVSSVFLTVLVLGEIFYPIDLLGMLFIFLAVTLISYKDLIALKKMKRVR 304
>gi|56460048|ref|YP_155329.1| DMT superfamily permease [Idiomarina loihiensis L2TR]
gi|56179058|gb|AAV81780.1| Predicted permease, DMT superfamily [Idiomarina loihiensis L2TR]
Length = 289
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 93/294 (31%), Gaps = 8/294 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE-VISHRVLWSLPGVFFAIVY 73
++E++ ++ +L + A + +++ Q E ++ R L + + +
Sbjct: 3 TRESSQKAVIIASLLILSAEASFAGVSALVKYISQDQPFEQLVFFRNLMAFLVLLPWLWR 62
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + F YA+ T + ++P +
Sbjct: 63 KG-------LGNLKTERLKLHLIRGAAGIAAMYLFFYAIATIPLAQATLVLLLSPFLIPV 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G ++L + + +A L + + I L + +A A +
Sbjct: 116 IGWLWLHDYVAKQTWLAIGLGFIGVFIFLDPMNSELSPVIGLAFLAAAFAAFTKTVIRRM 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ + + +G + L ++ GLL + +
Sbjct: 176 SDTESTSKIVFYFSTLATIASGLPLLWLWQPIPTQHWLGVVVMGLLAVYGQLAMTKAFSI 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + VG+ Y++ L + ++ + + I+V+A + +
Sbjct: 236 APPAKVGVFTYSSVLFAALLGYWLFGEELAWHMLWGALIIVVAGYFAIRTRRKS 289
>gi|15805539|ref|NP_294235.1| hypothetical protein DR_0512 [Deinococcus radiodurans R1]
gi|6458202|gb|AAF10091.1|AE001910_4 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 301
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 87/284 (30%), Gaps = 13/284 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + W + LE S + +R L + + +
Sbjct: 22 AIVVTLVFWASAFTGIRIGLEHFSPGHLALYRFLVASVTLLLVMAVTR------LPVPAP 75
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ V S ++++ + S PVI+ L + FL E LN L
Sbjct: 76 RDLWQIGVLSVAGISLYHVLLNMGERSVPAGTASLIIAAGPVITALLAARFLGESLNPLG 135
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIA------VTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + + + ++ L G L A A +++ F + + +
Sbjct: 136 WLGTAVSLGGVALIVLGQGQGLGFSAGALLVLGAAFFTSLYFVFQKGVLARVGSLRFTVW 195
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + +V+ G E L ++ + +++ I R
Sbjct: 196 SLILGTVPLLVFLPGFGTELRAAPLPAHLAVLYLGVFPSALAYLTWTFAISRVGAGVTSS 255
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y +P+ ++ + +L + V + I + +++
Sbjct: 256 FLYVSPVFALLMAWALLGEVPGAVTLLGGVIALAGVLLVNTRGR 299
>gi|56421450|ref|YP_148768.1| hypothetical protein GK2915 [Geobacillus kaustophilus HTA426]
gi|56381292|dbj|BAD77200.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 302
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 93/290 (32%), Gaps = 13/290 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T +F + + ++ ++ Q + +R+ ++ + + L +
Sbjct: 5 STAKAYAALFIGALAVSTSAIFVKW-SQAPSAVIAFYRLFLAVAIMTPLFLRHRSELRGV 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + S +LA H+ + +L + + P+ + G++F +E
Sbjct: 64 -----SRRDWLFSLCSGVLLAFHFILWFESLDYTSVASSVVLVTLQPLFAFAGGALFFRE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
RL + +A+L I+ +++ +A + +
Sbjct: 119 RLTVGAVGSAVLAIIGSSLISWGDFRVSGEALYGDGLALLACAFVTAYWLFGQEVRQRLS 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V +I A ++ FL + + ++ +K
Sbjct: 179 LMTYTYIVYSISAAVLWLYAMLFRLSLTAYQLTDWLCFLALAVIPTLLGHSVMNWAVKWV 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
STV + P+ + ++ +PI + I ++ + +YL
Sbjct: 239 SASTVSMAILFEPIGASALAYWLFGEPIRPFQWIGGIFILTGIALYLWEK 288
>gi|45358115|ref|NP_987672.1| hypothetical protein MMP0552 [Methanococcus maripaludis S2]
gi|44920872|emb|CAF30108.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 296
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 106/294 (36%), Gaps = 13/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + GT + + + +GI P T+F + + + R L + ++ + + L
Sbjct: 1 MNKVKGTAYTIYSSVAFGIMPFLTKFAYDGGANAVTTLMFRFLIAGLILYVFLKFKKISL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + V +L + A + A++ F A + + +F+ PV L
Sbjct: 61 KISR-----HNFVEILFYGAFLYALNTVFLYEAYNYIPTGIATTLHFIYPVTVTLLMISI 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVT----WSAYCFARKTIPVGS 192
KE L +++A + L + + + G + + +A ++ Y +
Sbjct: 116 FKENLGINKVLALIFSFLGMYCLLGGNCAGFDIYGVLLAAGSGLVYAGYIVSAGKCKYSK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + ++ ++ F+ + + F GIK
Sbjct: 176 IDSYVTIFYLSILSSVLLFIYGLFTNTLTLNMAFSSYASIGLISIFCTVLALIAFLEGIK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S I+ P++ I+ + +L + + + +V+I++++ +
Sbjct: 236 LIGPSNTAILSTLEPIVSIILGILLLNEVLSFKIGLGSVLVLISVIIVTIEKSK 289
>gi|240137375|ref|YP_002961844.1| hypothetical protein MexAM1_META1p0637 [Methylobacterium extorquens
AM1]
gi|240007341|gb|ACS38567.1| conserved hypothetical protein, DUF6; putative integral membrane
protein [Methylobacterium extorquens AM1]
Length = 313
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 86/296 (29%), Gaps = 10/296 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + A + + + L V L R ++ V I
Sbjct: 18 RRLVGIALMCVAPVFFASLDATGKVLAGAGVDPLLTTFMRYAVNVALVTALI------NP 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + + + + +L AL + Q T F P+ L L
Sbjct: 72 VTRPGVAHSRRLPLQILRSLLLFGSTACNFLALRSLQLAETISIQFAAPLTVALLAGPLL 131
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++ A + +L++ + + + C+A I
Sbjct: 132 GEWSSRMRLAAVPAGFVGVLVIVRPDALAAKPAILFSLGAMLCYAVYVIVTRKLAAHDST 191
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + + + LI GL + + RA S
Sbjct: 192 ATTVFYTGLGGLAVMSPLLPWIWTAPASGTVWALLIAVGLFGTIGHWLLVLAHARAPASL 251
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKT 313
+ YT L ++ + + GI+V + V ++ +
Sbjct: 252 LAPFIYTQILWSVLLGYLLFGDVPSAWTMLGAGIIVASGLAVLSEDALMRRHARRR 307
>gi|295108919|emb|CBL22872.1| Predicted membrane protein [Ruminococcus obeum A2-162]
Length = 290
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/282 (10%), Positives = 82/282 (29%), Gaps = 8/282 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + + + + + + ++ R L + +
Sbjct: 2 KQENYIKGMVMIILSAFFFACMNVSVRLAGDLPSIQKSFFRNLVAAIFAAIIL------G 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ G L+ + YA+ S ++P ++ +
Sbjct: 56 KNHIVPKVQKQYWGALLLRCAFGTLGILCNFYAIDHLLVADASILNKLSPFFAIIFSFLI 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE++ +Q LL + L + + + A + G
Sbjct: 116 LKEKITPVQGTCVLLAFIGCLFVVKPGFQNAALIPALIGVCGGLGAGIAYTMVRVLGTHG 175
Query: 199 E--MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ + F ++ + + L+ GL + + A
Sbjct: 176 VKGPIIVFYFSAFSCLFVLPYLIFDYTPMTGKQLVTLLMAGLFAAGGQFTITAAYTYAPA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ I +Y+ + + F+ + D I +G++++A +
Sbjct: 236 GKISIFDYSQIIFATLLGFFLFGEIPDCYSFIGYGLIILASL 277
>gi|257784184|ref|YP_003179401.1| hypothetical protein Apar_0379 [Atopobium parvulum DSM 20469]
gi|257472691|gb|ACV50810.1| protein of unknown function DUF6 transmembrane [Atopobium parvulum
DSM 20469]
Length = 321
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 92/294 (31%), Gaps = 11/294 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
+ G LFV WG ++L V + +I R L +
Sbjct: 27 TPDNKKKIYRGMLFVLIGGASWGAFGTAAKYLLDTYHVDPMWLIDIRELCACWLFLGTAF 86
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F +L+ + + + V S + +IYA+ + + + +
Sbjct: 87 AFDR-KNLMTVIRQPKELAKIFVVSLFAILFSQVAYIYAVNATNSGTATIMQSLGMLGVL 145
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
V + +I+ +L ++ ++ L+L A + A +
Sbjct: 146 AFVCVVGRRWPRRREILGIVLALIGTYLLVTGGNPGKLNLPTAGIFWGVMCAFAQAALSI 205
Query: 193 SE-------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
G F + + + + L L +IG + +
Sbjct: 206 LPKPLMEKWGSFTVNGLAFLFSGMLIAVFYQPWNHMPQLDAFGVLLVVIGVFVGTFLAYG 265
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ G+K A ++ PL+ +++V +L I F +++ +V+
Sbjct: 266 LYLQGVKDAGSLRAVLLGTVEPLMATITTVLVLGTTFSIADLIGFALILAMVVL 319
>gi|126729926|ref|ZP_01745738.1| Putative transporter, RarD family, DMT superfamily protein
[Sagittula stellata E-37]
gi|126709306|gb|EBA08360.1| Putative transporter, RarD family, DMT superfamily protein
[Sagittula stellata E-37]
Length = 304
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 95/303 (31%), Gaps = 12/303 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M G + L+ I + +V + + R +++P + + +
Sbjct: 1 MSPMRGIALKLASVFLFTIMASLIKASSSEVPAGQAVFFRSFFAMPVIVLWLTLRGDLST 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K M V+ + G AL + + P+++V L ++ L
Sbjct: 61 GFKAK-----RPLMHVWRGLVGVTAMGCNFAALGLLPLPEVTVLGYAAPMLTVILAALML 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY------CFARKTIPVGSS 193
ERL ++ A LL + + I P A+ + A I +
Sbjct: 116 GERLRLFRMSAVLLGLAGVTIALWPRLSPDAWNHAAMMGLIFIGVSTVMRALAQIQIRRM 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ +L +++ + + L+ G++ + +
Sbjct: 176 VSSEETSAIVFYFSLTATLFSLLTVPFGWTWPGWAVVWMLVAAGVIGGVAQIFLTSSYRF 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
A + + EY + L + + + I I+V+A V+ + K
Sbjct: 236 AGAAVLAPFEYASILFAVFFGYAVFDEVPTASVLIGAAIIVLAGVLIIWRERQLGLKRGQ 295
Query: 314 KKS 316
+S
Sbjct: 296 ARS 298
>gi|78061245|ref|YP_371153.1| hypothetical protein Bcep18194_B0393 [Burkholderia sp. 383]
gi|77969130|gb|ABB10509.1| protein of unknown function DUF6, transmembrane [Burkholderia sp.
383]
Length = 334
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 82/276 (29%), Gaps = 11/276 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A + I + L + E+ R + V+ + +
Sbjct: 60 GVLLAVLASFTFSIMNALVKELSATLPPAEIGFFRGVIGAALVYLLM--------RRESV 111
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + MLV + A + + YA+ S ++PV + L ++FLKE +
Sbjct: 112 PFSRNGLSMLVVRGLLGAFYLVCYFYAIAHIPLADASILAHLSPVFIILLSAIFLKEHIP 171
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +I++ +++ S+ + + FA +
Sbjct: 172 RQVWLLLPVILVGAVLIVKPYQYSSYSIYAGLGLLSAVFAGGAHVAIRQLSIKHHAYEIV 231
Query: 205 IPALFYVVWN--GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + L+ G ++ F + + S V I
Sbjct: 232 FYFLAIAALVSVPLMWKDFVWPDTPRQYGLLLALGGVSLFGQLFLTKAFTHERASVVAIT 291
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y + + +D ++++A +
Sbjct: 292 RYIGIVFNASWGWIFWHESMDVGSIAGGILIIVACI 327
Score = 39.9 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 46/133 (34%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
S + +++ F+ V + + +
Sbjct: 57 WKSGVLLAVLASFTFSIMNALVKELSATLPPAEIGFFRGVIGAALVYLLMRRESVPFSRN 116
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L+ GLL +F + Y I L+ I+ + +P+ +I+ S LK+ I +
Sbjct: 117 GLSMLVVRGLLGAFYLVCYFYAIAHIPLADASILAHLSPVFIILLSAIFLKEHIPRQVWL 176
Query: 289 VFGIVVIAMVVYL 301
+ ++++ V+ +
Sbjct: 177 LLPVILVGAVLIV 189
>gi|317471831|ref|ZP_07931166.1| integral membrane protein DUF6 [Anaerostipes sp. 3_2_56FAA]
gi|316900604|gb|EFV22583.1| integral membrane protein DUF6 [Anaerostipes sp. 3_2_56FAA]
Length = 290
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 90/293 (30%), Gaps = 8/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + + + + + + + +E R L +L F I G
Sbjct: 2 SKNQKIRGIICIVLSAFCFAWMNAFVKLSGDLPSIEKSFFRNLVALIFAFVMIKRSGAGF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K + + + + YA+ S ++P + +
Sbjct: 62 RF------QMKNLHWFILRSLAGTLGIFCNFYAVDHLVLSDASTLNKLSPFFVIVFSYLI 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L+E++ Q+ + + + S + L + + FA G
Sbjct: 116 LREKITVFQLTCITSAFIGSMFIVKPSFAAVSVLPALIGFLGGMFAGCAYACVRKLGTRG 175
Query: 199 E--MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E ++ + F + +F + ++L+ GL + + A
Sbjct: 176 ERGPFIVFFFSTFSCISCIPFMIGNFHPISGLQLVYLLLAGLAAAGGQFAITAAYTYAPG 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I +YT + + +F+ Q D + + I++ A VV +
Sbjct: 236 KEISIYDYTQIIFSTLLGLFLFGQMPDGFSILGYVIIITAAVVMFFYNNRRNK 288
>gi|253702039|ref|YP_003023228.1| hypothetical protein GM21_3447 [Geobacter sp. M21]
gi|251776889|gb|ACT19470.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M21]
Length = 308
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 80/293 (27%), Gaps = 13/293 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ T ++ WG + ++ + ++ + + R + + +
Sbjct: 10 RSSKATFWLILTTFFWGGSFIFNKIGFREIPPVTFLFFRFALATLLMAAICLPRLKRF-- 67
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
N + + LA F+ + F + +I L F +
Sbjct: 68 ------NRNILRKGLIVGVALAATNLSFVLGVSGTSVSRAGFLNNLFVLIIPLLCFAFWR 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG----F 196
ER + L + L + + T A A I V +
Sbjct: 122 ERFDRWTATGLFLALAGLWQLAQGGVEGFNKGDLLSTLCALFIALHIISVSKLLRDEDVY 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + A + F + + + F + + +
Sbjct: 182 LLSLVQFATVTAVGGLLFLVLPAPPFTISPVSGWSLVYCAIFPTVICFTLQNAYQRYTTP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ G++ P+ ++ IL + + + ++ ++++ L +
Sbjct: 242 TKAGLIYTMDPVWSMLGGTLILGERLTASEWLGCSLIFASVILPLSIKRLRER 294
>gi|21219868|ref|NP_625647.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|13122108|emb|CAC32287.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length = 334
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/296 (7%), Positives = 71/296 (23%), Gaps = 29/296 (9%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G + + +G + + + L + L V+ RV + + V
Sbjct: 17 IGLGLALASAVAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVMLPLAVRHRALPRRRP 76
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + +A + A+ + ++ P + + +
Sbjct: 77 AL--------VAGYGLFAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRP 128
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI---- 198
+ + +L + L + + + V S +G
Sbjct: 129 VTRAAALGVVLAVGGLACVVEVWSGLGFDALGLLLALGAACCQVGYFVLSDQGSDAGEEA 188
Query: 199 ---------------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + L +
Sbjct: 189 PDPLGVIAYGLLVGAAVLTIVARPWSMDWSVLAGSAPMDGTPVAAALLLAWIVLIATVLA 248
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++R G++ ++ V + +L + + + + +V+ +
Sbjct: 249 YVTGIVAVRRLSPQVAGVVACLEAVIATVLAWVLLGEHLSAPQVVGGIVVLAGAFI 304
>gi|330811876|ref|YP_004356338.1| hypothetical protein PSEBR_a4912 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379984|gb|AEA71334.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 292
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/287 (11%), Positives = 76/287 (26%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L + A L+ +++L + ++ + I GL +
Sbjct: 11 NQAFKGILLILVATFLFSSHDALSKYLSGFYPIIMVVWARYVVHTLLMAGIFLPRSGLRV 70
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + L T L LL + F+ PV+ L L
Sbjct: 71 LRTKRPLWQLARALCLLGTSLFFTTA-----LLYIPLAEATAVNFLAPVLVTALSVPLLG 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + Q IA + + +LI+ G I SA F +
Sbjct: 126 EHVTRGQWIAVIFGFIGVLIIVHPGGDLFTPAVILPFCSALFFCFYQLLTRKLSEIDSPT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + ++ ++ G + + + A + +
Sbjct: 186 TSNFFAGLCNTLVMSALVPFFWQVPSLLHGAMMLALGACGMTAHLMLTQAFRFAAPALLA 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + + ++ ++ +
Sbjct: 246 PFGYCQIVFAGLLGWLLFNHTPTLTTVVGITLICLSGLAAAWQQRRA 292
>gi|310815129|ref|YP_003963093.1| Putative transporter, RhaT family, DMT superfamily protein
[Ketogulonicigenium vulgare Y25]
gi|308753864|gb|ADO41793.1| Putative transporter, RhaT family, DMT superfamily protein
[Ketogulonicigenium vulgare Y25]
Length = 320
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 88/284 (30%), Gaps = 7/284 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + A+ ++ + + + + ++I V++S P +V +
Sbjct: 6 KGAVLALIAFAIFATHDVIVKAMGGIYATPQLIFFSVMFSFPLALLMLV------QDPRP 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
P G + V YA F TP+I L FL ER+
Sbjct: 60 GTLKPVHPGWVALRTGTGIVSGLTVFYAFTALPLTQVYAIIFATPLIITILSVPFLGERV 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ IA + + +L++ L A A C A I + + +L
Sbjct: 120 RMRRWIAVGVGLFGVLVVVRPGTAELGLGHAAALIGALCGALSAITLRKVGSKERPVVLL 179
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
P + G + + I L K + V M+
Sbjct: 180 LYPLFGNFIVMGAALPFVYQPMPITHLGLFALMAALGLMGGLFSIQAYKHGEAVVVAPMQ 239
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y+ + V I ++ +D T+ I++ + + ++ +
Sbjct: 240 YSQIIWASVFGYLIFRETMDFWTTVGTLIIIGSGIYIVVREGRS 283
>gi|226313283|ref|YP_002773177.1| hypothetical protein BBR47_36960 [Brevibacillus brevis NBRC 100599]
gi|226096231|dbj|BAH44673.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 298
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 92/297 (30%), Gaps = 6/297 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + L + + WG + ++ Q L+ + +I R + + + A ++
Sbjct: 2 KPQVKADLAMILVTLFWGTSYVFMQMGLKDLETFNLIGIR--FGIAFLLAAALFHKRLRG 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T+ + +G L+F + A + + I +
Sbjct: 60 TNRKTMLHAFILGALLFGVFATITNGVKSTTASQAGFLVSLTVIFVPLLSILLRNRPEKR 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
L +I L+ LS + + A S+ +
Sbjct: 120 VFVGAGLAMIGIGLLTLSAEFRISQGDLL---CIAGALFYATHITVTGRWANQSDTIQLG 176
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L AL +V++ L L ++ F + + K +
Sbjct: 177 IYQLGFTALLGIVFSFTLETPTLPQTTEAWIAVLALSVLCSAIGFVVQTVAQKYTTATHT 236
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
G++ P+ + + + + + I G+V+I++++ + + K+
Sbjct: 237 GVIFSLEPVFAALFAFLVTGETLSLRGYIGAGLVLISVLIAEIDVKSLLRPKQLTKN 293
>gi|134296516|ref|YP_001120251.1| hypothetical protein Bcep1808_2417 [Burkholderia vietnamiensis G4]
gi|134139673|gb|ABO55416.1| protein of unknown function DUF6, transmembrane [Burkholderia
vietnamiensis G4]
Length = 309
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 88/291 (30%), Gaps = 16/291 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G +V + +G ++ ++ V VL ++ R +
Sbjct: 12 LRGAFYVALSAAAFGAMAIFGRYAYAAGVDVLGLLIVRFAIGGVILAAIARRRRVAWP-- 69
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ A + AL Q L + ++ P L + +L E
Sbjct: 70 ----RGRRLAPLVAMGALGYVGQSFCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL + +A +L + +M L + +A+ + ++ G
Sbjct: 126 RLTRAKAVALVLCVAGSALMVGGGHGEPLGIGLALAAAVIYSLYIVGGTKATRGVDPLAT 185
Query: 202 VLAIP--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I A+ V F + L + F G++R
Sbjct: 186 TAIICLSATATLVAIAVVRTAAFGAPPRWPATAGGWASMLAIALVSTVAAMLAFFAGLER 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ P++ + + + + + ++ ++ A++ +
Sbjct: 246 LGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGIAILAAVLALVRAG 296
>gi|325475081|gb|EGC78267.1| membrane protein [Treponema denticola F0402]
Length = 299
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/299 (16%), Positives = 103/299 (34%), Gaps = 13/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
LF A + + + +++F L S + R + + + G +
Sbjct: 2 SNKTKSYLFAAIAIVCFASSFPFSRFALTHFSSGALGFLRCVLASIFLLII-----GKFN 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ K + A ++ F L T +S TP+++ S+
Sbjct: 57 NLRPPFKIKHIGLFFISGALGFGLYLLVFNMGLKTITAATSSIIIATTPIMTAVAASIIY 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
E++ I+ L ++I+ L G L +++ AV++ Y + +
Sbjct: 117 DEKIGKAGYISILTAFCGVIIIILWEGLLSVEIGILWTVSAAVSFCGYNILSRKLTKMGY 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I + A+ + E G L L ++ + F+ GI+
Sbjct: 177 TSIEIVTYSVICAAIILSPFCVDGYKELSSAGFKYIGSLLCLGILTSALGYFFFNKGIEI 236
Query: 254 AK-LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
A+ S V + PLL + L + ++ I I++ +++V+ L N K
Sbjct: 237 AEKTSDVTNFLFFNPLLASILGYLALGETLNAGAAIGGTIIIASIIVFALKGGPNREKK 295
>gi|302870411|ref|YP_003839048.1| hypothetical protein Micau_5969 [Micromonospora aurantiaca ATCC
27029]
gi|315503312|ref|YP_004082199.1| hypothetical protein ML5_2526 [Micromonospora sp. L5]
gi|302573270|gb|ADL49472.1| protein of unknown function DUF6 transmembrane [Micromonospora
aurantiaca ATCC 27029]
gi|315409931|gb|ADU08048.1| protein of unknown function DUF6 transmembrane [Micromonospora sp.
L5]
Length = 344
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 82/290 (28%), Gaps = 9/290 (3%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
FV A +WG + L+ + + ++ + + +RV + + L +
Sbjct: 39 FVALAA-IWGSSFLFIKVGVTELHPVHLTLYRVATGALTLLVVLAVLRDRLPRDPRVWAH 97
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS--FSYFVTPVISVFLGSVFLKERLNH 145
V + +G + + + V+ + ++ +
Sbjct: 98 MLVVAAFGVAVPFTLFGYGEQRVESMLAGIWNATTPLIVLPLAVLVFRTERLTVRRAVGL 157
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA-----YCFARKTIPVGSSEGFFIEM 200
A +L++L + + + Y S
Sbjct: 158 GLGFAGVLVVLGVWEGVGGAHFVGQLMCFGAAACYGLAIPYQKKFVAGSAYSGLSLSAAQ 217
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++A L V + L L L F I I+ A ST
Sbjct: 218 LLVATAQLALVAPFVGTPPSPTGLSPRVIASVLALGALGTGLAFVINMRNIRLAGASTAS 277
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ Y P+ ++ +L + ++ + + +V++ + V +
Sbjct: 278 TVTYLIPVFAVLVGAVVLGERMNWHQPVGAFVVLVGVAVAQGLFGRRRPR 327
>gi|256789035|ref|ZP_05527466.1| integral membrane protein [Streptomyces lividans TK24]
gi|289772928|ref|ZP_06532306.1| integral membrane protein [Streptomyces lividans TK24]
gi|289703127|gb|EFD70556.1| integral membrane protein [Streptomyces lividans TK24]
Length = 334
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/295 (7%), Positives = 70/295 (23%), Gaps = 29/295 (9%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + +G + + + L + L V+ RV + + V
Sbjct: 18 GLGLALASAVAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVMLPLAVRHRALPRRRPA 77
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +A + A+ + ++ P + + + +
Sbjct: 78 L--------VAGYGLFAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRPV 129
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI----- 198
+ +L + L + + + V S +G
Sbjct: 130 TRAAALGVVLAVGGLACVVEVWSGLGFDALGLLLALGAACCQVGYFVLSDQGSDAGEEAP 189
Query: 199 --------------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + L + +
Sbjct: 190 DPLGVIAYGLLVGAAVLTVVARPWSMDWSVLAGSAPMDGTPVAAALLLAWIVLIATVLAY 249
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R G++ ++ V + +L + + + + +V+ +
Sbjct: 250 VTGIVAVRRLSPQVAGVVACLEAVIATVLAWVLLGEHLSAPQVVGGIVVLAGAFI 304
>gi|146306479|ref|YP_001186944.1| hypothetical protein Pmen_1447 [Pseudomonas mendocina ymp]
gi|145574680|gb|ABP84212.1| protein of unknown function DUF6, transmembrane [Pseudomonas
mendocina ymp]
Length = 301
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 89/279 (31%), Gaps = 16/279 (5%)
Query: 37 WGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + + ++ L VI+ R+L A + + +L
Sbjct: 20 WGSSFIALKLAFAELPALWVIAGRMLLGALVFLAAWRWRGR------VDYRRGDWKYLLA 73
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+A +++ F AL + P++ +FL ERL + L +
Sbjct: 74 LTACEPCLYFIFEALALQHTSASQAGMITALLPLLVALGAYLFLHERLTRTTLAGFALAL 133
Query: 156 LSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
L ++L + +A+ + G F + +
Sbjct: 134 GGALWLSLAGSADEHAPNPLLGNFFELLAILCATAYTLLLKHLTGRYSPFILTALQALVG 193
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+LF+V + ++ + +F++G+ R S
Sbjct: 194 SLFFVPLAAWQADWPSSFSPQGLAAVAYLGVVVTVGAYGLFNFGVSRLPASQATAFTNLI 253
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
PL +V + +L + + + + G+V + +++ +
Sbjct: 254 PLFTLVFAAVLLGERLSAEQMVAAGLVFVGVLLSQWRSR 292
>gi|228992097|ref|ZP_04152033.1| Transporter, drug/metabolite exporter [Bacillus pseudomycoides DSM
12442]
gi|228767826|gb|EEM16453.1| Transporter, drug/metabolite exporter [Bacillus pseudomycoides DSM
12442]
Length = 295
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 94/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKTTKRKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + V S TP V ++ L
Sbjct: 62 TTIQINKKDWLLFAWI-GFIGYFVSITCQFVGTKLSDAHTGSLVTSATPAFMVVFATLIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L +I++ +L L + I+ G +L A + +
Sbjct: 121 KEKLTTRRILSTVLATLGVTIVIGWDIEVGSYFIGTIILVGAAITWALLSIYVKIASQQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + L L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPCMIWELQSNPIGDLNTTIILGILYLGIISTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + ++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNRNFFIGGALIIFSVIIATFEK 293
>gi|190150369|ref|YP_001968894.1| hypothetical protein APP7_1100 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303253677|ref|ZP_07339815.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307248089|ref|ZP_07530118.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|307263713|ref|ZP_07545321.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|189915500|gb|ACE61752.1| hypothetical protein APP7_1100 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302647597|gb|EFL77815.1| permease [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306855487|gb|EFM87661.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306870967|gb|EFN02703.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 297
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 120/294 (40%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L +S + R++ +LP +FFAI
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ ++ I+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KRLKQQPHLILVILITSAIIGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVAFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + Y R+T + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPVYFHIRRTFQLSNIYSFIFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + + N + F+ +++ ++ + +G
Sbjct: 183 IFLIPISLYFIW---NTDMDFIYAQNPNISYFIAILSVVSGTALLSYTLASTILPFNMLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|148553486|ref|YP_001261068.1| hypothetical protein Swit_0562 [Sphingomonas wittichii RW1]
gi|148498676|gb|ABQ66930.1| protein of unknown function DUF6, transmembrane [Sphingomonas
wittichii RW1]
Length = 328
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 12/303 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G L +L+ I + + + Q+ +++ R++ SLP F +
Sbjct: 12 RLIGFLLSAVGSMLFAIKGVLIKLIYVYQIDTTALLAVRMMLSLPVFFGVGLLEWRRRPA 71
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + LV V L + + F P + + G +
Sbjct: 72 AQRPDARSVGLAALVGILGYH-VSSWLDFAGLQSVEAQAERLILFTYPFLVILFGRLIFG 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVG 191
RL + A L LL+M G + LA A T++ Y + + +
Sbjct: 131 HRLRFHALAGAGLSYAGLLVMFGSDPARLTPAMIGGAGMILAAAGTFALYQLFARELILR 190
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + + A + G L + + S G
Sbjct: 191 CGPALFTAIAMSAAGLSVIAHFALTHGIALPSAPPRAWALMIGLAVFSTIVPTFMMSAGT 250
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
R I+ +P++ I ++ +L +P +V+ + ++ +
Sbjct: 251 ARIGAQGTAIISTISPVVTIALAIVVLGEPFGIGEAAGTLLVIGGVGLFTWIESRPGRRR 310
Query: 312 KTK 314
Sbjct: 311 SKS 313
>gi|49083090|gb|AAT50945.1| PA0239 [synthetic construct]
Length = 293
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 91/296 (30%), Gaps = 5/296 (1%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA 70
+ S AS T+ G L + A L+ ++FL + ++ + A
Sbjct: 2 NASTSPLPASDQTLRGILLICAAVFLFASHDGLSKFLSGFYPIVMVVWARYLVHTLLMVA 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ GL++++ + L T L L + F+ P++
Sbjct: 62 VFVPRNGLAVIRSRRPLMQLARALCLIGTSLFFT-----TGLRYLPLAEATAVNFLAPLL 116
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L LKE+++ Q +A L + +L + G A+ SA CF +
Sbjct: 117 VTALSVPLLKEKVSLGQWLAVLTGFIGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLT 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ +F + + ++ L +I G + +
Sbjct: 177 RMLANSDSPTTSNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQA 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A +T+ Y + + + + D ++ + +V
Sbjct: 237 FRHAPPATLAPFSYGQIIFAGLLGLLVFGHVPDAWALPGILVICASGLVVAWRRGR 292
>gi|169831295|ref|YP_001717277.1| hypothetical protein Daud_1134 [Candidatus Desulforudis audaxviator
MP104C]
gi|169638139|gb|ACA59645.1| protein of unknown function DUF6, transmembrane [Candidatus
Desulforudis audaxviator MP104C]
Length = 319
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/280 (10%), Positives = 77/280 (27%), Gaps = 13/280 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WGIT + + L ++ ++ R + +
Sbjct: 13 LALLFVAFVWGITFVVVKEALTEIGPYYFLAIRFTVAFLFLALICW--------RSTLRV 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + L + F AL F ++ V+ + + + L
Sbjct: 65 NRANLTAGFVIGLALFGGYAFQTVALQHTTAANAGFITGLSVVLVPLFVAGLTRTLPSPL 124
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++ + L ++ + G + A + + +
Sbjct: 125 AVLGVACATIGLGLLAVQGDFTVGYGDFLVFCCALCFATHIILVGRYAPCLDPVLLAIIQ 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ A + L L + F I + K + ++
Sbjct: 185 IGTVAFISFLIAPVLESFPVTLAPSVQIALLATAIPATALAFLIQNKAQKFTSPTHTAVI 244
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+ +++ + ++ + I ++V+ M++ +
Sbjct: 245 FTMEPVFAGLAAWLWGGETLEIRQWIGGAVIVLGMLITVW 284
>gi|17545721|ref|NP_519123.1| hypothetical protein RSc1002 [Ralstonia solanacearum GMI1000]
gi|17428015|emb|CAD14704.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 312
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 88/290 (30%), Gaps = 10/290 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G L + + +G ++T + V V +SL + V + L
Sbjct: 17 KLLGVLLIAVSAASFGAMAIFTHYAYASGADTVGLLAVRFSLAALALTAVMRVRRIGLPP 76
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
P+ G+ A F AL L + ++ P+ L +VFL ER
Sbjct: 77 ----WPRVAGLAAMGGIGYAGQSFAFFTALHYAPASLVALLLYLYPMFVTVLAAVFLHER 132
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
L ++A +L + + +G+ S A + +
Sbjct: 133 LTPAALLALVLCSVGAGLTVGGAGLAGGSATGVVLGVAAAVIYSVYITVGARVTRGVDPI 192
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ A+ Y F L GL F G++R
Sbjct: 193 ACTTLICTAAAVVYAGAAVAGVPARFPGSVAGWAAALAIAGLSTVIAILAFFAGLQRLGA 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ P++ + + +L + I + +++ ++
Sbjct: 253 AQASMLSTLEPVVTVALAALLLGESIGAAQMAGGALILAGVLWLTRADAR 302
>gi|325298609|ref|YP_004258526.1| hypothetical protein Bacsa_1481 [Bacteroides salanitronis DSM
18170]
gi|324318162|gb|ADY36053.1| protein of unknown function DUF6 transmembrane [Bacteroides
salanitronis DSM 18170]
Length = 293
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 91/284 (32%), Gaps = 19/284 (6%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ ++WG T + T+ L +S +E++ +R + +
Sbjct: 14 VLAILTVMIWGTTFVSTKILINSGLSPVEILFYRFALAYICLLLV-------SHKRFIAR 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ ++++ AL S P+ ++FL +F KERL
Sbjct: 67 SWKDEGLLMLSGLCGGSLYFIAENTALGITLASNVSLLICTAPIFTLFLSRLFYKERLRR 126
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +L+ ++ + ++ L+ + L + + + + L +
Sbjct: 127 KVLYGSLIALIGVSMVVLNGSLVLKINPLGDFLTLIAAIFWALYCLILKQLGGRYSTLFV 186
Query: 206 PALFYVVWNGFSGGEHFFLG----------NIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ F + L + + + +++ ++
Sbjct: 187 TRKVFFYGLVSLLAYLCFFPTDFALPLLHKPVVYLNLLFLGIVASMLCYMVWNAAVQVLG 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S Y PL+ +++S L + + V + ++ + +
Sbjct: 247 ASRTANYIYINPLVTLLTSALFLSETLTPVSLLGTACIIGGVYM 290
Score = 36.8 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 46/151 (30%)
Query: 159 LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
+ L S + +T + + + + G + AL Y+ S
Sbjct: 1 MKTALRSHTWFYHVLAILTVMIWGTTFVSTKILINSGLSPVEILFYRFALAYICLLLVSH 60
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ L ++ S F + + S V ++ TAP+ + S
Sbjct: 61 KRFIARSWKDEGLLMLSGLCGGSLYFIAENTALGITLASNVSLLICTAPIFTLFLSRLFY 120
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K+ + I +I + + +L +
Sbjct: 121 KERLRRKVLYGSLIALIGVSMVVLNGSLVLK 151
>gi|284034781|ref|YP_003384712.1| hypothetical protein Kfla_6924 [Kribbella flavida DSM 17836]
gi|283814074|gb|ADB35913.1| protein of unknown function DUF6 transmembrane [Kribbella flavida
DSM 17836]
Length = 324
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 84/280 (30%), Gaps = 13/280 (4%)
Query: 32 CAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+LW + + + S + R++ + +V +D
Sbjct: 24 VTVVLWASAFVAIRHVGHEFSAGALSLGRLVVGSLMLGAVVVSRPRRWPEKRDWKL---- 79
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+LV V+ A T+ + P++ L + L E +I
Sbjct: 80 --LLVCGLLWFGVYNVALNAAEQRLDAGTTAMLINIGPLLIAVLAGLLLGEGFPRRLVIG 137
Query: 151 ALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + +L++ + S ++ +A A + +G +
Sbjct: 138 SAVAFGGVLLIGVSSSDGTAETWSVILCVVAAIAYAVGVVAQKPLLGRLPALEVTWLACT 197
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
I A+ + + E + + F ++Y + R +G Y
Sbjct: 198 IGAISCLPFAPALVRETAAARPATIWWVVFLGAFPTALAFTTWAYALARTSAGRMGATTY 257
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P L IV +L + T+ + ++ + + L +
Sbjct: 258 LVPPLAIVLGWLLLGETPATLAYAGGALCLLGVAISRLRS 297
>gi|220916848|ref|YP_002492152.1| protein of unknown function DUF6 transmembrane [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954702|gb|ACL65086.1| protein of unknown function DUF6 transmembrane [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 324
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 2/287 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G + +LWGI L + + +S ++ R + ++ +L
Sbjct: 16 TRRGWILFVALGVLWGIPYLLIKVAVRDLSPASLVFLRTAAGAVLLLPFVLVRGNLRPVL 75
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +L + + L +
Sbjct: 76 ARWRPIALFTFGEMAVPWLLLADAERHVTSSLAGLVIAATPLVGAVASRLSAGHEPLGAR 135
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R++ L + A ++ L L + + LA+ V A + +
Sbjct: 136 RMSGLAVGLAGVVALLGLDLGRGDARAVAELAVVVVGYALAPRIVARRLSDLPALDVVAV 195
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
LA+ AL Y + G + + L + F +F I +
Sbjct: 196 SLAMCALAYAPF-GIAQLPGAWPPAEAVGAVAGLGVLCTALAFTLFFQLIAEVGPVRATV 254
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ Y P + + + V +L +P + F +++ + +
Sbjct: 255 VAYVNPAVAVAAGVTLLGEPFTVGTAVGFALILGGSWLATSGAARRA 301
>gi|167753708|ref|ZP_02425835.1| hypothetical protein ALIPUT_01989 [Alistipes putredinis DSM 17216]
gi|167658333|gb|EDS02463.1| hypothetical protein ALIPUT_01989 [Alistipes putredinis DSM 17216]
Length = 305
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/301 (11%), Positives = 96/301 (31%), Gaps = 18/301 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ PL++ L +S ++ +R + + + L
Sbjct: 1 MNNLRGVLYAVVSSATFGLIPLFSIPLLQGGMSSPAILFYRFGLAAAMMGLIALATRRPL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +V + + + + F+ P+ + ++F
Sbjct: 61 RITWPQTGTLLL------LGAMYSVTALGLLRSYTYIPSSVATTINFLYPLGVAIVMTLF 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT----------WSAYCFARKTI 188
+E+ + ++A L+ ++ + +++ S V ++ Y K
Sbjct: 115 FREKNSVWLLVAILISLVGVALLSWGDIGGPQSDRAIVGVGFAGATVLTYTIYIVGVKKS 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + VL A F++V+ + G L+ +
Sbjct: 175 RISRLDPMIQAFYVLLFSACFFLVYALSTTGAPLPGKWHLWQNLLLLALVPTVVSNLTLV 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
IK + I+ PL ++ V + +++ A+++ +L
Sbjct: 235 LAIKEIGSTMTSILGSMEPLTAVLVGVLHFGEKFGLDSASGLILIITAVIIVILQAKKKE 294
Query: 309 G 309
Sbjct: 295 H 295
>gi|170722964|ref|YP_001750652.1| hypothetical protein PputW619_3801 [Pseudomonas putida W619]
gi|169760967|gb|ACA74283.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
W619]
Length = 296
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/296 (10%), Positives = 90/296 (30%), Gaps = 8/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + + +G+T ++ + S ++ R +++ + G
Sbjct: 1 MNQRTALGALHIGALFFGLTGVFGKLAASASPAIIVFGRAAFAVFALALFASLSGPGWQR 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +G ++ + ++ A+ + + + P +V L + +
Sbjct: 61 LRSQDVQRLLLGGVLLAGHWVSF-----FIAVKVGGVAIATLGFASFPAFTVILEGLLFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER+ + + LL+ + L+++TL L A+ S
Sbjct: 116 ERIRRNEALLVLLVSIGLVLVTLSFDLASEATGGLLWALLSGLLFSLLSLTNRAGSGRLP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F+ + + + +F + K
Sbjct: 176 AVQAALWQNLVVGLCLLPFAVHGLGAVKPMDWLWIALLGVFCTGVAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
T ++ P+ I + + + + +++ A+V+ + +T
Sbjct: 236 TAAVVFAMEPVYGIAVAWVVFAETPTLRMLLGGALIIFAIVLSSRLGAEQPPRPRT 291
>gi|119385022|ref|YP_916078.1| hypothetical protein Pden_2291 [Paracoccus denitrificans PD1222]
gi|119374789|gb|ABL70382.1| protein of unknown function DUF6, transmembrane [Paracoccus
denitrificans PD1222]
Length = 313
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 101/302 (33%), Gaps = 7/302 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE----QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L + +++ I + V + + R L+++P + + +
Sbjct: 7 SPLRGILLKCLSVLVFTIMASIVKATAEGGLGVPPGQQVFFRSLFAIPVILVWLAFRHEL 66
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
LK ++ +A + W + + ++FLG
Sbjct: 67 GVGLKTFRPMGHFYRGVIGTAAMGLGFWALALLPFPEVTAIGYAAPLLTVIFAAMFLGED 126
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
RL+ + + ++I+ ++ G A+ A C A I V
Sbjct: 127 VRLFRLSMVVLGLVGVVIVLSPRLSFGAEMGYKESLGAMVTLSGAACTALAQIFVRKLVQ 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ ++ + + + + + L+ GLL + + + A
Sbjct: 187 EERTSAIVFWFSVTSTLLGLLTVPFGWVMPDAETAALLVTIGLLGGLGQILLTSAYRYAD 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV-INSGKNKTK 314
S V EY + LL ++ FI + V I +V+ A ++ + + +N+ +
Sbjct: 247 ASLVAPFEYASMLLALLIGWFIFDEAPTLVMLIGAALVITAGILIIWRERQLGLERNRQR 306
Query: 315 KS 316
K+
Sbjct: 307 KA 308
>gi|222082823|ref|YP_002542188.1| hypothetical protein Arad_9579 [Agrobacterium radiobacter K84]
gi|221727502|gb|ACM30591.1| conserved hypothetical membrane protein [Agrobacterium radiobacter
K84]
Length = 295
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 85/297 (28%), Gaps = 6/297 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F A ++ I ++ + L V R + GGL
Sbjct: 2 KSNTAGYVFTLLAISIFAIQDGISKHLVSAYPPLFVAMIRYWGFMLFAIALAARSPGGLR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T K G+ V +LA+ I + + + + P+I L L
Sbjct: 62 AAVHTKK----PGLQVVRGLLLALQIVIAISSFVMVGLAHSQAIFSSGPLIVALLSVPIL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ + +A + + +L++ + A F+ +
Sbjct: 118 GEKVGWRRWLAISVGFVGVLLILKPESGFFDIRFLVPLAGALVFSLYVVITRYVSRVDSS 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M + V G + D +F+ L +
Sbjct: 178 MTSFFYTGVVGAVAMSTVGPFFWTPLLPSDWVFMGLLCLTGMTSHYFLIRAYDLLDAVVI 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y + + V I + + + +V+ ++ + K+++K +
Sbjct: 238 QPLTYLQLVFSAIIGVTIFGETLGINMIVGAV-IVVGAGIFTIWRENALAKSRSKSA 293
>gi|307245955|ref|ZP_07528038.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306853174|gb|EFM85396.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
Length = 297
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 121/294 (41%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L +S + R++ +LP +FFAI
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ ++TI+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KRLKQQPHLILVILITSTIIGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVTFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + Y R+T + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPVYFHIRRTFQLSNIYSFIFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + + N + F+ +++ ++ + +G
Sbjct: 183 IFLIPISLYFIW---NTDMDFIYAQNPNISYFIAILSVVSGTALLSYTLASTILPFNMLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|228998148|ref|ZP_04157746.1| Transporter, drug/metabolite exporter [Bacillus mycoides Rock3-17]
gi|228761540|gb|EEM10488.1| Transporter, drug/metabolite exporter [Bacillus mycoides Rock3-17]
Length = 295
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 93/293 (31%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKTTKRKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + V S TP V ++ L
Sbjct: 62 TTIQINKKDWLLFAWI-GFIGYFVSITCQFVGTKLSDAHTGSLVTSATPAFMVVFATLIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE L +I++ +L L + I+ G +L A + +
Sbjct: 121 KENLTTRRILSTVLATLGVTIVIGWDIEVGSYFIGTIILVGAAITWALLSIYVKIASQQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + L L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPCMIWELQSNPIGDLNTTIILGILYLGIISTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + ++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNRNFFIGGALIIFSVIIATFEK 293
>gi|288573812|ref|ZP_06392169.1| protein of unknown function DUF6 transmembrane [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569553|gb|EFC91110.1| protein of unknown function DUF6 transmembrane [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 300
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 93/300 (31%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G+ V A + WG T E S L V R+ + +++ G +
Sbjct: 5 SSVRSGSAIVLLAAVFWGTTGTLQALAPEGASPLVVGVLRMTLGGLFLAAFVLFRYGSDA 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + L L T T + +P+++ L L
Sbjct: 65 LTGRWPWKTLLMASSSMAVYQLFFFS----AVLRTGVAVGTMVTIGSSPILAGLLARAVL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-----IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+E L +A + I ++++L G I + LA+ S + +
Sbjct: 121 REPLTPRWAVATVSAIGGCVLLSLGDGAVRVDIVGVFLAVGAGASYGFIGLGMKQLQRTR 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + ++ L + + + +FS +
Sbjct: 181 NPLAVIAAAMLGGAVLGSPLFLFHPLAWLATVRGASVALALGLVGTAIPYGMFSVALTMI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ST + PL + VF+L + + ++ +++ LP ++ K +
Sbjct: 241 PISTACTLTLMEPLTASLLGVFLLGEILGVRSFAGIALIFTGIMILSLPDGMSRKKEERS 300
>gi|67078134|ref|YP_245754.1| drug/metabolite exporter [Bacillus cereus E33L]
gi|66970440|gb|AAY60416.1| transporter [Bacillus cereus E33L]
Length = 292
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 99/289 (34%), Gaps = 5/289 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G+L++ A +WG + + L + LE++ R L ++ +
Sbjct: 2 KNTLLGSLYLILASSIWGGMYVVVKVLVSVIPPLELVWLRYLVAIVALLIIGFVTKQKWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K +G++ ++ +I+ G + +S F+ + L
Sbjct: 62 IEKRYFLIIITIGVIGYAISIVTQETGTMLSLAQMGAVITSSTPAFMVLFAWLILKERLT 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ + + +II+ + GI LL A+ + R
Sbjct: 122 FKKGISVCLATIGVIIIVGIGDLNTSSVLGGISLLIAALTWALMSVLVKRLPSDYSQIVV 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
V I +V+ + L + + F +++ G++
Sbjct: 182 TTYSTLVALIVLTPFVLPRLHAIDISQLTRPTIWGGLLYLGIISTAVAFLLWNRGLQMLN 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S+ G+ + P++ + IL + I + +++I +++ +
Sbjct: 242 ASSGGLFFFFQPVVGTLLGWLILGEKIGVTFWVGSALILIGVLLVIREK 290
>gi|209546567|ref|YP_002278485.1| hypothetical protein Rleg2_4489 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537811|gb|ACI57745.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 301
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 95/300 (31%), Gaps = 5/300 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A G L + A + W + +Y++ L V I+ R L+ + ++
Sbjct: 7 TTRLAGSEHEKGVLLIVAATLAWSASGVYSRLLTT-DVWTAIAWRSLFGGLFLLIPCLFL 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GG+S + + G FI AL + Y TP I+
Sbjct: 66 EGGISRRQW---RSVFHPSGLAMIACQTFSQGCFIGALYMTTVANVTMIYATTPFIAALF 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G + L+ER+ +IA + + + ++ S I + + + + +
Sbjct: 123 GWLILRERVARRTLIAGAVSLFGVGVIV-ASSIGGGTGWGDLLALGMTASFALVIIIPRI 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + F + G L + S +F G KR
Sbjct: 182 NPGVPSLPPTVVSAFLTLVIFAPFGSVGSLDLHNWIVLAAFGATNFSLALVLFLAGAKRM 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ +L + + +++ A+ + V S +++ +
Sbjct: 242 PPAEAALIGTMEIVLTPFWVWLLFSEQPPVATYFGGAVILGAVFWHTAIDVSRSQRSRDR 301
>gi|114705116|ref|ZP_01438024.1| hypothetical protein FP2506_09266 [Fulvimarina pelagi HTCC2506]
gi|114539901|gb|EAU43021.1| hypothetical protein FP2506_09266 [Fulvimarina pelagi HTCC2506]
Length = 312
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 101/294 (34%), Gaps = 14/294 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + + + + + V EV+ R ++L V + + +
Sbjct: 10 SPIFGVSLKLLSILSFVAMQTAIKAAGETVPAGEVVFFRCFFALVPVAIYLAWLGDLRTA 69
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
A+ I G +++ + TP+I+V ++FL
Sbjct: 70 FSTDDLKGHAIR-----GLIGVSAMGLGFFSITRLPYPEWITINYATPLITVIFAALFLG 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
ER+ + A ++ + + ++T+ S ++ IA + A I V
Sbjct: 125 ERVRAYRWTAVVIGLCGVAVVTVPSLTVGAEALSGSHVAGIIACLVGSVFAAVAMIQVRR 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ L + + FS + + + +FL+ G+L + + +
Sbjct: 185 LAQTEKTATIVLYFMLAATIISAFSAPFGWIVPSFEQAVFLVLAGILGGVGQLLLTAAYR 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
A STV EY++ +L I + + I+ + IV+ A + +
Sbjct: 245 YADTSTVAPFEYSSLILAIAIGALVFGEAINVSTLVGGAIVIAAGIFIIWRESR 298
>gi|323692462|ref|ZP_08106697.1| hypothetical protein HMPREF9475_01560 [Clostridium symbiosum
WAL-14673]
gi|323503514|gb|EGB19341.1| hypothetical protein HMPREF9475_01560 [Clostridium symbiosum
WAL-14673]
Length = 306
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 98/306 (32%), Gaps = 18/306 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV------ 72
+ + G+++ + I++G P+ ++L E + + ++ +R +LP + +
Sbjct: 1 MKELKGSVYAVISAIIFGCMPIVAKYLYAEGCNPVSLVVYRYSLALPVLLILALREQGKD 60
Query: 73 -----YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+ + +T ++ + + +F
Sbjct: 61 ERERKATGEPSKRDSGMRITMSQLRQFIILSTGFSLTPILLFSSYNYISSGSATTIHFSY 120
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYC 182
PV+ + KE+ +I + + ++ L++ + + VT++ Y
Sbjct: 121 PVLVILASVFIFKEKATWTKIASVVFCVIGLVLFYEPGQANGAAGILLALASGVTYTFYM 180
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + + F + + A+ V + +G F +L
Sbjct: 181 MYFERSTLKFMKPFKTNFYMSLVSAVMVFVLSLATGTFVLFHSIRGWAAAFGFSFMLIVV 240
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+F GI I+ PL IV V + + I ++ +++ L
Sbjct: 241 ACVLFQLGIAMTGAQKTAILSTFEPLTSIVLGVVCFGEAVGIKTGIGVAFILASVISITL 300
Query: 303 PTVINS 308
N+
Sbjct: 301 FGRKNA 306
>gi|317485594|ref|ZP_07944470.1| RarD protein [Bilophila wadsworthia 3_1_6]
gi|316923131|gb|EFV44341.1| RarD protein [Bilophila wadsworthia 3_1_6]
Length = 298
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 81/292 (27%), Positives = 149/292 (51%), Gaps = 4/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
MG LF Y+ +G++PLY L VS LE++SHR LW + +V+ + +
Sbjct: 1 MGILFGV--YLSFGLSPLYWNLLHGVSALEMVSHRSLWGSLIIAAFMVWKGQFPAFFRAI 58
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + S L +W +I+A+ + S +++ P+IS LG +F +ER
Sbjct: 59 RDRREIALIGLCSLAHLW-NWWIYIWAVTNGKVLECSMGHYIVPMISTILGFLFFRERPG 117
Query: 145 HLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
LQ + + + +LI+ + G +P SL +A++ + + F RK VG++ G +E+
Sbjct: 118 RLQWMGIIFAGIGVLILLMGYGAVPWASLNVALSAALFAFFRKRATVGAAPGMLMELLFS 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A Y++W G G HF G L LIG G +++ S GI+ + ++GIM+
Sbjct: 178 APFLWGYLIWLGERGQGHFLAGGAYMDLLLIGCGFVSAIPQLGLSLGIRSVPMISLGIMQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y P + + F++++PI + +VF + + + +L TV ++G+ K ++
Sbjct: 238 YILPTTVFMLGAFVMREPISASKLLVFLFIWVGVGCFLSGTVFSTGRKKLRQ 289
>gi|296158655|ref|ZP_06841485.1| RarD protein, DMT superfamily transporter [Burkholderia sp. Ch1-1]
gi|295891223|gb|EFG71011.1| RarD protein, DMT superfamily transporter [Burkholderia sp. Ch1-1]
Length = 298
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/289 (17%), Positives = 109/289 (37%), Gaps = 4/289 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSL 80
G A ++ + Y L +S L++ + R++W++PG I L
Sbjct: 7 KRGIALSVGASAMFALLSAYATLLAPLSGLDIFAWRIVWTVPGALLLIALRKRLPILRQL 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + P+ + SA +L F++A L + S YF+ P++ V +G +
Sbjct: 67 LYRMVTEPRLGAAMTVSAALLGAQLWVFLWAPLHGRMLEVSLGYFLLPLVMVLVGRFYYH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ LQ +A + +G + F + S F
Sbjct: 127 ERLDGLQWLAVACAAAGVGHELWMTGAFSWPTLLVALGYPPYFVLRRKINQDSLAMFTVE 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L +P + ++ S ++ L L++ + + ++ G
Sbjct: 187 MMLLLPVAIVLAFSSDSLALIVGRADMWCLLLPGLG-ALSTIALASYLKASRLLPVALFG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ Y P+L+++ S+ +L + + + + + IA+ + L +V
Sbjct: 246 ILGYVEPVLLVLVSITLLGETLGAAQLATYIPIWIAVALTALHSVRLVR 294
>gi|220933333|ref|YP_002512232.1| hypothetical protein Tgr7_0144 [Thioalkalivibrio sp. HL-EbGR7]
gi|219994643|gb|ACL71245.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 299
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 99/293 (33%), Gaps = 19/293 (6%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFA-IVYFSGGLSLLKDTL 85
L + A + W + + L V +++ R +L + + +L++
Sbjct: 10 LALSLASLFWAGNFIVGRALRDAVPAIDMNFWRWTIALVILLPFGALALRRDWALIRSQW 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ + T + F AL T V+PV+ + + + ++
Sbjct: 70 R-----LVVFLALTGIVGFHVFVYTALQTTTAVNALLFLSVSPVMILVGSWLRYGDPISR 124
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+Q++A + ++ ++++ H G + LA+++ + + +
Sbjct: 125 VQVLAMGISLVGVVVLVTHGELERLLGLEFNIGDLWMLLAVSLWSAYSVVLKTKPAELNQ 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++A+ + V G E L + + ++YG+ R
Sbjct: 185 TPLITGTVIVAMLVMTPVYLATLPGDEPVAFTGPVVAGLLYIGVFASVIAYFCWNYGVAR 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S G+ + PL V S+ L + I+ ++ +V V
Sbjct: 245 LGPSRAGVFLHLNPLFGAVLSIIFLGEGIEPYHLAGAALIATGLVFSSRGAVK 297
>gi|15894162|ref|NP_347511.1| permease [Clostridium acetobutylicum ATCC 824]
gi|15023771|gb|AAK78851.1|AE007603_2 Predicted permease [Clostridium acetobutylicum ATCC 824]
gi|325508290|gb|ADZ19926.1| permease [Clostridium acetobutylicum EA 2018]
Length = 306
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 101/300 (33%), Gaps = 13/300 (4%)
Query: 14 LSKENA--SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVF 68
++ EN S G +F A LWGI+ + Q+L E S ++ R++ S +
Sbjct: 1 MTNENIVDSNLRKKGLIFAVLASTLWGISGIAAQYLFQMEDFSPEWLVVIRLIISGVLLL 60
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
A + ++ K ++F + + A+ + +++P
Sbjct: 61 AATYVATK-KNIFKVFKNRHDIFSFIMFGFGGMLAVQYTYFVAIKYSNAATATILQYLSP 119
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AY 181
VI V LK+ + ++I +L ++ + I ++++ + A
Sbjct: 120 VIITIYLIVHLKKLPSLYEVIGIILALIGTFFIITKGDIKTINISGITLFWGILSAIAAA 179
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ + + G + + + + + + + + +
Sbjct: 180 VNTLQPRRILAKWGSNLVAGWGMVIGGVLMSFVHSPFQFKGHISLVSISCVAVVVIIGTL 239
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F ++ IK K + I+ PL + S+ + + G +++ ++
Sbjct: 240 IPFWLYMESIKYIKPTEASILGAFEPLSAAILSLAFFNLHFSVLEWLGSGCIILTTIILS 299
>gi|322389311|ref|ZP_08062871.1| DMT superfamily drug/metabolite transporter [Streptococcus
parasanguinis ATCC 903]
gi|321144055|gb|EFX39473.1| DMT superfamily drug/metabolite transporter [Streptococcus
parasanguinis ATCC 903]
Length = 350
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 81/295 (27%), Gaps = 6/295 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +F F A + + I ++ L+ V + + L + G+ ++
Sbjct: 1 MEKNKLKAIMFAFLAAVFYAINVPISKVLLQYVGPTTMAALLYLGAGIGIGMMSLFNKKD 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + + F + + S V + + +
Sbjct: 61 REKAESLTKAELPYIVGMIVLD--IAAPIFLMLGISYGSSANASLLGNFEIVATTVIALI 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSE 194
KE + +A LI LS ++++ + + + S
Sbjct: 119 LFKEAVTKRLWLAIGLITLSSILLSFEGTDSFHFSYGSLLVIMATVCWGLENNCTRELSS 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ +L F G + L + ++
Sbjct: 179 KSTYQIVMLKGLCSGLGALVIALIKRESFPGIGYIAIALALGFVAYGLSIFMYVRAQNVL 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ PL+ + + L + + + I ++VI + ++ T I
Sbjct: 239 GAAKTSAYYAVNPLIGALLAFVFLSESLSWMYVIALIVMVIGSALVVVDTFIRQH 293
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 58/171 (33%), Gaps = 6/171 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G+L V A + WG+ T+ L S +++ + L S G + +
Sbjct: 155 GSLLVIMATVCWGLENNCTRELSSKSTYQIVMLKGLCSGLGALVIALIKRESFPGI---- 210
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
L + ++ A TS Y V P+I L VFL E L+
Sbjct: 211 --GYIAIALALGFVAYGLSIFMYVRAQNVLGAAKTSAYYAVNPLIGALLAFVFLSESLSW 268
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ +IA +++++ ++ + + I T++
Sbjct: 269 MYVIALIVMVIGSALVVVDTFIRQHDHEHQHTFTHSHGGSTHTHTVRHSHV 319
>gi|294675643|ref|YP_003576258.1| hypothetical protein RCAP_rcc00086 [Rhodobacter capsulatus SB 1003]
gi|294474463|gb|ADE83851.1| protein of unknown function DUF6, transmembrane [Rhodobacter
capsulatus SB 1003]
Length = 322
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 96/287 (33%), Gaps = 7/287 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + ++ + L S +++I L S P + ++
Sbjct: 3 SGKQNAKGAGLGLLSMAIYATHDAVVKQLGYSYSAVQIIFFAALLSFPLLTVILL----- 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ P ++ A YA F P++ +
Sbjct: 58 -RDPRAGSLRPVRPFWVILRAVATVATSVSAFYAFAHLPLAQVYPLLFAMPLLLTIMAIP 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER+ + A ++ ++ ++I+ L +A ++A+C A ++ V
Sbjct: 117 ILGERVGWHRWAAVVVGLIGVIIVVRPGQAELGLGHLAAVFAAFCGALASVIVRKIGHEE 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ +L P L + G + + +PD + L + + +
Sbjct: 177 RSVVLLLSPLLGNFLAMGAALPFVWVPLQLPDLGLMAVVALFGLVAAFLSILAYRLGEAV 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
V M+Y+ L + + ++P+DT + G+V+++ + +
Sbjct: 237 IVAPMQYSQILWAVFFGWVLFREPVDTQTVVGAGVVILSGLYIVWRE 283
>gi|317128861|ref|YP_004095143.1| hypothetical protein Bcell_2151 [Bacillus cellulosilyticus DSM
2522]
gi|315473809|gb|ADU30412.1| protein of unknown function DUF6 transmembrane [Bacillus
cellulosilyticus DSM 2522]
Length = 302
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 90/294 (30%), Gaps = 17/294 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A WG + + + V R ++ + ++
Sbjct: 10 YLMLALATSSWGSAFIAGNYATRDFDPITVAFLRFFFAAIILIPLMLI----KEKNHVLP 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + + T +A++ F A +S PV+ + L FLKE++
Sbjct: 66 KGKEWFLLASLGLTGIALYNICFFIATKEAPIVKSSLFIASNPVLIIILSGFFLKEKITS 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTIPVGSSEG 195
II +L ++ I+ + IAV A + +
Sbjct: 126 RNIIGLILALVGAAIIITEGNFMEVIRAGFQPIDIVLFIAVICWALYSVLGKVALQRFSS 185
Query: 196 FFIEMCVLAIPALFYVVWNGFS--GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L + + E+ + L +++ F ++ GI+
Sbjct: 186 LESTTYAVVFGTLMLLPFAMIEGEWNEYIQATTLTWVSILHMSIIVSVISFIMYYQGIRT 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I PL ++ ++ +L +P+ + + V+ + + P
Sbjct: 246 IGAAKASIFINLMPLSAVILAILLLDEPLLPIHIVGAAFVLTGVTIGTRPKRKK 299
>gi|257791301|ref|YP_003181907.1| hypothetical protein Elen_1550 [Eggerthella lenta DSM 2243]
gi|317490437|ref|ZP_07948920.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
gi|325831268|ref|ZP_08164560.1| putative membrane protein [Eggerthella sp. HGA1]
gi|257475198|gb|ACV55518.1| protein of unknown function DUF6 transmembrane [Eggerthella lenta
DSM 2243]
gi|316910481|gb|EFV32107.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
gi|325486869|gb|EGC89316.1| putative membrane protein [Eggerthella sp. HGA1]
Length = 315
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/302 (11%), Positives = 86/302 (28%), Gaps = 28/302 (9%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P + G ++W +T + T+ L ++ +E++ R + +
Sbjct: 16 QRRPAVRGHALALVTVVVWAVTFVSTKVLLVHLAPIEILFFRFVIGFVALALL------- 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + ++ AT + V++ AL + P+ + +V
Sbjct: 69 RPRILHVRGFKEERWFMLAGATGVTVYYLLENIALTFTTASIVGVVVAAAPLFTGVASAV 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPL--------------------LSLAIAVT 177
LKERL + + + + +++ G +
Sbjct: 129 VLKERLRAPFFVGFAVAMAGVCLVSFAGGASGGLVAEGGLGQAGLIGVALALAAAGTWAV 188
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
+S T S L + GFS +
Sbjct: 189 YSIVTKKLSTFGYDSILVTRRTFAWGLAFMLPALPLLGFSPDWGSLAAPEMWGNLVFLGL 248
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++ F ++ +K + Y P L +++S +L P+ + + +
Sbjct: 249 GASALCFVTWNMAVKELGPVKTSLYIYLVPALTVLASAAVLGDPLTPPVVAGVLLTIAGL 308
Query: 298 VV 299
+
Sbjct: 309 FL 310
Score = 38.0 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 40/133 (30%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
A+A+ + + +V G +
Sbjct: 24 HALALVTVVVWAVTFVSTKVLLVHLAPIEILFFRFVIGFVALALLRPRILHVRGFKEERW 83
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
F++ + + + + + S VG++ APL V+S +LK+ + + F
Sbjct: 84 FMLAGATGVTVYYLLENIALTFTTASIVGVVVAAAPLFTGVASAVVLKERLRAPFFVGFA 143
Query: 292 IVVIAMVVYLLPT 304
+ + + +
Sbjct: 144 VAMAGVCLVSFAG 156
>gi|320530121|ref|ZP_08031191.1| integral membrane protein DUF6 [Selenomonas artemidis F0399]
gi|320137554|gb|EFW29466.1| integral membrane protein DUF6 [Selenomonas artemidis F0399]
Length = 292
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 91/289 (31%), Gaps = 6/289 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G L + A WG T + +E + + R + V + G +
Sbjct: 1 MGNLRGVLMLLAASFFWGTTFVAQVVGMEGLGPYSYAALRFALGAACLTLLWVLYRGKRA 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + + V ALL T+F ++ V +G+ L
Sbjct: 61 QMRRAGTYRSGFRAGLPVGLAMFVGVTMQQVALLYTTAGKTAFIT-TLYIVLVPIGAALL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK----TIPVGSSEG 195
+R+ + I A+L L + ++ + L + V SA+ + + + +G
Sbjct: 120 GQRIRPVNWIGAILAFLGVYFLSAYGSFDLNIGDVIVFVSAFFWMVQILLIDRFARAVDG 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L + + + L G + G +
Sbjct: 180 IELCLSQLLVCVVGSTILAVLYEICTLAAIAGAAVPILYGGIFSCGVAYTCQILGQAYVR 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ + V+ IL + + + +++ ++ +P
Sbjct: 240 PAQAAVILSLEAAIAAVTGWLILGEVMSAAQLGGCALLLAGALITQIPA 288
>gi|116253137|ref|YP_768975.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257785|emb|CAK08883.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 298
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 87/296 (29%), Gaps = 11/296 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +++ A + G T + ++ + + + R + P + + L
Sbjct: 2 SRQVQGYVYLALAMLTVGSTVVASKLIASGLPPFGATALRFAIAFPVLLLLMWATGARLP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +++ + + I L PV+S + + L
Sbjct: 62 RFSRHDR----LILVIQAGAGSVGYTTLLISGLSLTSAADAGVIIGTLPVVSAAISILLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ER ++A L +L + S + +AV
Sbjct: 118 RERPQRALLLAVALATSGVLSIAFTPDAAGGSLTGNALIFLAVVCEGLFILLNKRLKTEI 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + I + + F + + + F ++ G +R
Sbjct: 178 APLALSTLMAGIGFIVAAIPAIFEAPFADGISASAVAAVVYYALVPTVGGFLLWYAGAER 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + AP+ ++ + IL +P+ + G V+ A++
Sbjct: 238 VSGTEAALFTALAPVSAVMLAFIILGEPVGLSQIAGIGCVLAAVLGLAFAGSRTVK 293
>gi|259503447|ref|ZP_05746349.1| drug/metabolite exporter family transporter [Lactobacillus antri
DSM 16041]
gi|259168525|gb|EEW53020.1| drug/metabolite exporter family transporter [Lactobacillus antri
DSM 16041]
Length = 307
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 99/298 (33%), Gaps = 11/298 (3%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFF 69
+ N S M G + A ++WGI+ Q + Q + ++S R L + +
Sbjct: 2 KMDNSNLSRQVMKGIGWAALASVMWGISGTVLQLISQNLAIPATWMLSTRTLITGVILLA 61
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
G A+ ++ ++ L ++ F YA+ T + +++P+
Sbjct: 62 ISFCIYG-KRTFDVFKTKETAISVVTYAIFGLMLNLLTFYYAVQTGNASAATILQYLSPL 120
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYC 182
V V L+ER IIA +L ++ +++ + LS + +A
Sbjct: 121 FIVLGDVVILRERPLRSDIIAFILAMVGIVMCVTRGNLHSLSLPVVSLLWGLGSGITAAF 180
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + + + + A +
Sbjct: 181 YVVLPKRAVAKNPPLVVLGWGTMIAGVLFNLYRPMWVNPPHISTTLVLSVGTVILFGTIL 240
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F + + A V IM+ P++ V SV ++ V I +V++A+ +
Sbjct: 241 PFGLLLHATNFAPSDVVSIMDALQPIVTSVLSVIFFHIFMNWVEIIGIILVLVAIYLL 298
>gi|319401193|gb|EFV89408.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
Length = 289
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 99/287 (34%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + + + ++ + + V + R ++ F I +
Sbjct: 2 NPKVKGIIAILISAVGFSFMSVFFRLAGDLPVFQKSLARNFVAMFIPLFFIYKYRQ---- 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 58 --PMFGKLSSQPLLISRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTIVLSLIFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + +IA S A V +
Sbjct: 116 EKVRKYQITAMIIAILGMLLIVKPEFSSSVIPSIAGLLSGIFAASAYTCVRALSTREKPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF VV + LFL+G GL + + A +
Sbjct: 176 TIVFYFSLFSVVVLIPFSIFTYTPMTTIQILFLLGAGLSAAVGQIGITLAYSFAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + + + + + D + T+ + +++ A Y+
Sbjct: 236 IFTYASIIFTALFGFILFGESPDMLATVGYIVIIGASY-YMFDKARR 281
>gi|297203034|ref|ZP_06920431.1| transmembrane drug/metabolite transporter [Streptomyces sviceus
ATCC 29083]
gi|297148279|gb|EDY56063.2| transmembrane drug/metabolite transporter [Streptomyces sviceus
ATCC 29083]
Length = 322
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 87/287 (30%), Gaps = 7/287 (2%)
Query: 31 FCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
++WG + + E V+ + V R + + + + L + T +
Sbjct: 22 LALSVVWGSSFALIKVALDEGVAPVWVAFGRCFFGVLALGAICLVRRDALPGSRATWSHA 81
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQG--FLTSFSYFVTPVISVFLGSVFLKERLNHL 146
AV L+ + + +G + + +T S + + V + +
Sbjct: 82 LAVAALLNALPFSFLAFGETHVSSVLAGVFNAVTPLSTLLFALALVPQEQLTARRLSGLA 141
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA---YCFARKTIPVGSSEGFFIEMCVL 203
+L++L + + + IA T + + R+ + L
Sbjct: 142 VGFCGVLVVLGVWQGLGGASLVGSLACIASTVCLGAGFAYTRRFFSGRDGSAVALSTVQL 201
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + G G + L + + I+ A + +
Sbjct: 202 ICATVELALLAPLLNGAPEVPGAKGLAALAVLGALGTGIAYILNLRVIRVAGPTIASTVT 261
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y PL + +L +P+ + +VV+ +V+ P +
Sbjct: 262 YVIPLWSTLFGTLLLSEPLSWNTLVGACLVVVGVVLTRAPGGRTPHR 308
>gi|221636320|ref|YP_002524196.1| protein of unknown function DUF6, transmembrane [Thermomicrobium
roseum DSM 5159]
gi|221157933|gb|ACM07051.1| protein of unknown function DUF6, transmembrane [Thermomicrobium
roseum DSM 5159]
Length = 306
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 90/290 (31%), Gaps = 6/290 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A T+ G L + +LWG + + T+ + V L + R L + +
Sbjct: 9 RRAARQHTIGGHLLLATTAVLWGSSYIGTRAIVGDVPPLLLGFLRALSATVVLGVLAKLA 68
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L +G+L + + ++ + +FL
Sbjct: 69 GESLRARSSAWIPLAGLGVLGVAYFYIGLNLALQWTTATAASFLSLPYPALTAVGGWLFL 128
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ + + A L++ + G + +A++ + A +
Sbjct: 129 RERLGARQIAGIGLAALGATWLTVASAQDNVGGAWIGNLLALSITVAWTAYTLLGRRLLL 188
Query: 195 GFFIEMCVLAIP-----ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L + GG + L + + ++
Sbjct: 189 KWTPLAATFHMMAAGTLVLALAAGLEYFGGGRPRWTVESTLITLYLGVVCTGLGYAFWNA 248
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G++R + +T + Y P+ ++V + +L + V + +V+ +
Sbjct: 249 GLRRVRAATASVYLYLQPVTVVVLGIALLGEQPSLVTLVAGALVIAGTAL 298
Score = 36.8 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 6/79 (7%), Positives = 23/79 (29%)
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+ L ++ + + ++ + + P L V L++ +
Sbjct: 76 SSAWIPLAGLGVLGVAYFYIGLNLALQWTTATAASFLSLPYPALTAVGGWLFLRERLGAR 135
Query: 286 RTIVFGIVVIAMVVYLLPT 304
+ G+ + + +
Sbjct: 136 QIAGIGLAALGATWLTVAS 154
>gi|327193956|gb|EGE60831.1| putative permease protein [Rhizobium etli CNPAF512]
Length = 346
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 100/310 (32%), Gaps = 15/310 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
+ M G + +++ + + + +V R ++L + + Y
Sbjct: 35 MHSVLRNPMRGIALKVSSVVVFLAMQTFIKLAGPDIPPGQVTFCRSFFALFPIIAYLAYI 94
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + TI + F Y LL + P+++V
Sbjct: 95 GQLRPAF-----HTENPVGHLKRGTIGILSMAFGFYGLLHLPLPEAIALGYALPLVAVIF 149
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFAR 185
+VFL E + + A L+ + + I++ + V +SA
Sbjct: 150 AAVFLGETVRIYRWSAVLVGMAGVAIISWPKLTLFRDGGMETEQAVGALCVLFSAVLGGM 209
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I V ++ +L +++ S + + P LFLI G
Sbjct: 210 AMIQVRRLVEEEKTATIVLYFSLTASLFSLASLPFGWLVLPWPSALFLIAAGFCGGVAQI 269
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A +ST+ EYT+ LL + F+ I IVV A + +
Sbjct: 270 LLTESYRHADVSTIAPFEYTSILLGGIVGYFVFGDVPSVTMLIGTVIVVSAGIFIIYREH 329
Query: 306 INSGKNKTKK 315
+ + +
Sbjct: 330 QLGIEQREAR 339
>gi|282922024|ref|ZP_06329721.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282593682|gb|EFB98674.1| conserved hypothetical protein [Staphylococcus aureus A9765]
Length = 288
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 101/293 (34%), Gaps = 6/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IY + + P ++ L VFL
Sbjct: 56 HQPMFGRLSSQPLLITRSTLGLIGVLLNIYTIDHMVLSDADSLMKLNPFWTILLSIVFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + + L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I Y + + + + + D T+ + +++ A ++ K
Sbjct: 236 IFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK 288
>gi|221209656|ref|ZP_03582637.1| integral membrane protein DUF6 [Burkholderia multivorans CGD1]
gi|221170344|gb|EEE02810.1| integral membrane protein DUF6 [Burkholderia multivorans CGD1]
Length = 316
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 87/290 (30%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P + +
Sbjct: 2 KTRLVGYLYLAAAMAGVGSTVVASRVAAGGLPPFTATALRFLIATPLLLALM----RMRR 57
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L AV +++ +A + I P +S + +V L
Sbjct: 58 LRWTRPSTRDAVLLVIQAAAGGVGYTVLLICGTKLASPIDAGVMLGTLPAMSTLIAAVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPV 190
+ER +AA L +L +T G + S+ AV A
Sbjct: 118 RERQTRRDWVAAALATSGVLFVTFAPGHAMPSMRALVGDALVLAAVACEAVFILLNRRLT 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSG-GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + A+ + ++ F + + + +
Sbjct: 178 VPLPPLTLSTAMSALGFVLALIPAAFEWRAVVSGWTFGAVSAIAYYALVPTVLGYVCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + R +VV ++V
Sbjct: 238 GSARTSGTEAALFTAIAPVSAVLFAVVLFGDALTATRVAGIALVVAGVLV 287
>gi|312879121|ref|ZP_07738921.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
gi|310782412|gb|EFQ22810.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
Length = 297
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 85/291 (29%), Gaps = 15/291 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G A + WG++ + + L ++ ++ R A + L + +D
Sbjct: 11 RGRACALGAVLFWGVSFVAAKAALRELPPGLLVWVRCTLGAGVFTLAALLRGSELRIPRD 70
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + V + H LLT T++ V+P + LG FL ERL
Sbjct: 71 Q-----RLYLAVLGVMGIPFHLMIQSVGLLTVSASATAWILAVSPALVALLGWAFLGERL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L + + ++ PL V S G +
Sbjct: 126 GAKGAGGIALAMTGVFLVAGGGKGPLGYTLGDGLVLLSALNWAAFCVASRRGLKVLSPAQ 185
Query: 204 AIPALFYVVWNGFSG---------GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
A+ + W L L + + ++ +
Sbjct: 186 MGWAIMVLGWIASFPLLALPGCDLTVLARLSPAGWGAALFLGVGCSGLAYALWYDALLVL 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ G +Y PL+ +++ F+L + G ++ + +
Sbjct: 246 PVAQAGAFQYLQPLVAVLTGWFLLGETPTWPLLAGGGAILAGVSILSRSGR 296
>gi|229592748|ref|YP_002874867.1| hypothetical protein PFLU5369 [Pseudomonas fluorescens SBW25]
gi|229364614|emb|CAY52515.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 292
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 81/283 (28%), Gaps = 5/283 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + A L+ +++L + ++ + ++ L
Sbjct: 15 KGILLIVLATFLFSSHDALSKYLAGFYPIVMVVW-----ARYLVHTLLMAGIFLPQSGLR 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ K GM V A L FF AL + F+ P++ L L E +
Sbjct: 70 VLRSKRPGMQVVRALCLLGTSLFFTAALHYIPLAEATAVNFLAPILVTALSVPLLGEHVT 129
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A + + +L++ G + SA F + F
Sbjct: 130 RGQWLAVICGFIGVLVIIHPGGELFAPAVLLPLCSALFFCFYQLLTRILSKFDTPTTSNF 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L + + + + + ++ G + + + A + + Y
Sbjct: 190 FAGLCNTLVMSAMVPFFWQIPTLWHGVLMLALGTCGMTAHLMLTQAFRFAAPALLAPFGY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + D + G++ ++ +
Sbjct: 250 CQIVFAGLLGWLVFNHTPDVTTVVGIGVICMSGLAAAWQQRRR 292
>gi|70728714|ref|YP_258463.1| hypothetical protein PFL_1334 [Pseudomonas fluorescens Pf-5]
gi|68343013|gb|AAY90619.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
Length = 294
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 6/291 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSG 76
N + + G + A +L+ +++L + ++ R + + V SG
Sbjct: 9 NGAEHPIKGIALICLAVLLFASHDTLSKYLSAFYPIVMVVWARYVVHTLLMLVVFVPRSG 68
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++++ + + L T L L + F+ P++ L
Sbjct: 69 FSAVVRTKRPGLQLLRALCLIGTSLLFT-----TGLRYIPLAEATAVNFLAPLLVTALSV 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ER++ Q +A L + +LI+ G + SA CF + G
Sbjct: 124 PFLGERVSRAQWLAVLAGFVGVLIVVRPGGALFTPAILLPLGSALCFGFYQLLTRKLSGV 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + + + LF+IG G + + + A
Sbjct: 184 DSPTTSNFLTGILNSLIMSALLPFFWSTPTLVHGLFMIGLGTCGMLGHMLLTQAFRHAAP 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + Y L + I D + ++ ++ +
Sbjct: 244 AMLAPFSYGQILFAGLFGYLIFDHTPDQYALVGIAVICLSGLAVAWAQRKR 294
>gi|138896501|ref|YP_001126954.1| hypothetical protein GTNG_2864 [Geobacillus thermodenitrificans
NG80-2]
gi|196250856|ref|ZP_03149541.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
gi|134268014|gb|ABO68209.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196209585|gb|EDY04359.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
Length = 302
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 95/290 (32%), Gaps = 13/290 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ + + + + ++ ++ Q + +R+ +++ + + L +
Sbjct: 5 SSAKAYVALLIGALAVSTSAIFVKW-SQAPSAVIAFYRLFFAVVIMTPFCLRHIDELKRI 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + V S +LA H+ + +L + + P+ + G++F +E
Sbjct: 64 -----SRRDWLFSVCSGVLLAFHFILWFESLDYTSVASSVVLVTLQPLFAFAGGAIFFRE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
RL I +ALL I+ ++++ + +A +
Sbjct: 119 RLTIGAIGSALLAIVGSILISWGDFRASGEALYGDVLALLACAMVTAYWLFGQELRQRLS 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V I A ++ S FL + F + ++ +K
Sbjct: 179 LMTYTYIVYGISAATLYLYTVLSRFSLTAYQPTDWLCFLALAIIPTLFGHSVMNWAVKWV 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
STV + P+ + ++ + I + I ++ + +YL
Sbjct: 239 SASTVSMAILLEPIGASALAYWLFDEQIRLFQWIGGIFILTGIGLYLWEK 288
Score = 36.4 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 12/119 (10%), Positives = 36/119 (30%)
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S + A+ + + + D LF + G+L +F F ++
Sbjct: 28 KWSQAPSAVIAFYRLFFAVVIMTPFCLRHIDELKRISRRDWLFSVCSGVLLAFHFILWFE 87
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ +++ ++ PL ++ + + ++ ++ S
Sbjct: 88 SLDYTSVASSVVLVTLQPLFAFAGGAIFFRERLTIGAIGSALLAIVGSILISWGDFRAS 146
>gi|330502247|ref|YP_004379116.1| transporter DMT superfamily protein [Pseudomonas mendocina NK-01]
gi|328916534|gb|AEB57365.1| transporter DMT superfamily protein [Pseudomonas mendocina NK-01]
Length = 300
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/294 (22%), Positives = 121/294 (41%), Gaps = 7/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G A +L+ + P Y Q+L + +++ + RVLWS+P V +V
Sbjct: 6 RGVALSVGASMLFALLPGYVQWLNPLDGVQIFAQRVLWSIPLVLLLVVLTRQTASLRETF 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + +A ++ V WG F++A L S YF+ P+ V G +F E
Sbjct: 66 IRLRREPLLLAACPLAAALIGVQWGLFLWAPLAGHMLEVSMGYFLLPLAMVLTGRLFYGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL LQ +A +L +L L+L A+ + Y R+ + + + GF +EM
Sbjct: 126 RLRPLQQLAVTCAMLGVLHELWRTQAFSWLTLVTALGYPPYFMLRRWMRLDALSGFVLEM 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+LA A++ ++ G +G + G L + S L G
Sbjct: 186 LMLAPLAIWLIIAYGPAGAFAERPQLWLLVPVMALIGTLAFAAYMASSR---LLSLRLFG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I+ Y P+L+ ++ +L + D + + + + A+++ + K +
Sbjct: 243 ILSYVEPVLLFGVALLVLGETFDAGQWLTYLPIWAAVLLVGWDSARLLRKQREN 296
>gi|254519088|ref|ZP_05131144.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226912837|gb|EEH98038.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 291
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 93/281 (33%), Gaps = 6/281 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N G LF+ + + + + + + + R L S F I+
Sbjct: 2 NNLSNRTKGILFLVFSAFGFAVMSAFVKLAGDLPSFQKTFFRNLVSCIVALFFII----- 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + +L+ + + V Y++ + ++P + ++
Sbjct: 57 -KNKESFFGKKENQKVLLLRSALGTVGIVLNFYSIDKLVLSDANMLNKLSPFFVIIFSAL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E++N Q IA ++ + L + S + A A A + G
Sbjct: 116 FLSEKINFKQFIAIIIAFVGTLFIIKPSFNLDMIPAFMGILGAIFAAGAYTCLRVLGGRE 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ +LF +V + +I +L+ GL S + K A
Sbjct: 176 KHYTIVFYFSLFSLVVIFPFMMAVYTPMSIKQFFYLLMAGLFASIGQFGITIAYKYAPAK 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ I +Y+ L + S + DT+ I + I+ +
Sbjct: 236 EISIFDYSNILFSAMISFLVFGVLPDTLSFIGYFIIFASSY 276
>gi|118444168|ref|YP_879104.1| transporter [Clostridium novyi NT]
gi|118134624|gb|ABK61668.1| Transporter [Clostridium novyi NT]
Length = 282
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/287 (16%), Positives = 105/287 (36%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
L++ + + + + + V+E + R SL F A+ +G +
Sbjct: 2 NNKTKAVLYMLLSALGFAFMGAMVKLAGNLPVIEKVFFRNFISLFVAFGALKKTTGPILG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ K A +L + L + Y++ + ++ ++P +FLK
Sbjct: 62 KRENQKYLLARALLGLTGMFL------YFYSIDHLKLADSAMLNKLSPFFITLFAIMFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L +++++ +++ + L++ + AIA SA V +
Sbjct: 116 EELTSMKVVSMIIVFMGALLVIKPQWDLSIIPAIAGFLSAAFAGGAYTLVRFLKDRENPS 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +L V+ +F + L+LI G+ + +Y K A S V
Sbjct: 176 TIVFYFSLVSVLGAFPFMAMNFIMPTKIQFLYLILTGVFAAIAQFSLTYSYKYAPASEVA 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVI 306
I Y + + FI + D + + I+++ A +VY
Sbjct: 236 IYNYVNIVFSGIIGFFIWNEIPDKLSILGGVIILVMATIVYFYNKKR 282
>gi|77359585|ref|YP_339160.1| inner membrane protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874496|emb|CAI85717.1| conserved protein of unknown function ; putative inner membrane
protein [Pseudoalteromonas haloplanktis TAC125]
Length = 343
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 95/291 (32%), Gaps = 17/291 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
LP M +L + A LWG + + ++ + VI R+L +L
Sbjct: 11 KLPAMPASLCLIIATFLWGSSFIALKYAIAIYDPALVIFLRMLTTLFLSLCL------WR 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+++ + ++ S +++ F +A+ P+I L
Sbjct: 65 YVIRFEYRVGDWKYLIAMSLAEPCLYFLFEGHAMEYTSASQAGVIVSCLPIIIAVLAFFM 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTL----------HSGIPLLSLAIAVTWSAYCFARKTI 188
LKE ++ II I +++T+ L L V + Y K +
Sbjct: 125 LKEYISKSIIIGFTFCIGGSILLTVLSPNSDQAPNPLLGNFLELMAMVCAAFYTVCIKHL 184
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S I + ++ F L + + +++
Sbjct: 185 ASRYSPLTLIALQGISGSLFFAPFLLFIDLPSENQHNITALLSILYLGSFVTLGGYGMYN 244
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y I + + T P+ ++ S IL + ++ + + +V + +++
Sbjct: 245 YAISKVSVLTAAAYSNLIPIFTLILSAIILNEVLNLWQWLSIFVVFVGVMI 295
Score = 39.1 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 34/103 (33%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + ++ + F + F + ++ S
Sbjct: 47 VIFLRMLTTLFLSLCLWRYVIRFEYRVGDWKYLIAMSLAEPCLYFLFEGHAMEYTSASQA 106
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G++ P+++ V + F+LK+ I I F + ++ +
Sbjct: 107 GVIVSCLPIIIAVLAFFMLKEYISKSIIIGFTFCIGGSILLTV 149
>gi|262067139|ref|ZP_06026751.1| putative membrane protein [Fusobacterium periodonticum ATCC 33693]
gi|291379141|gb|EFE86659.1| putative membrane protein [Fusobacterium periodonticum ATCC 33693]
Length = 287
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 96/283 (33%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R SL F + + +
Sbjct: 4 SNKTKGVFWMLVSVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSLMLSAFILFRQKESIKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + YAL + ++PV +FLK
Sbjct: 64 ------EKENIPFVFGRSFFGFIGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ Q+I +L++L+++ + S P + ++A +SA + G
Sbjct: 118 ERVDKKQVIGIILMLLAVVFVIKPSFSPEVIPSLAGLFSAVLAGFSYTIIRYLNGKVKSE 177
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L + + L G G+ + +Y A S V
Sbjct: 178 INVFYFSLLSVICTFPLMMMNFIKPTLNEFLILLGGIGISAAMGQFGLTYAYTFAPASEV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYL 301
I Y + ++ + D I +++ A+ +YL
Sbjct: 238 SIYNYVIIITSMLMDYILFSTIPDLFSFIGGFMIMSTAIYLYL 280
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 33/76 (43%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
F+ G Y ++ ++ ++ +P+ + + + LK+ +D + I
Sbjct: 68 IPFVFGRSFFGFIGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLKERVDKKQVIG 127
Query: 290 FGIVVIAMVVYLLPTV 305
++++A+V + P+
Sbjct: 128 IILMLLAVVFVIKPSF 143
>gi|260424855|ref|ZP_05733491.2| putative membrane protein [Dialister invisus DSM 15470]
gi|260403393|gb|EEW96940.1| putative membrane protein [Dialister invisus DSM 15470]
Length = 343
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 86/288 (29%), Gaps = 4/288 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
S++ +G + A + + + L +S E+ R L L + +
Sbjct: 21 SRKRTRGNIFLGVVTTILASLSFTAMSACAKALAPISSEEMTFFRGLVGLIFIPLLTL-- 78
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
T K + + F + + + I + + S I +
Sbjct: 79 --QTKEPFFTGKYKFMLSLRGFFGSAALLFYFLSIEGMTLGDSQILSQLAAFFMCILSPI 136
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ L L ++ + + +L A I + +
Sbjct: 137 FLKEKLPKEAIPGLVVIALGTLCVVQIWNFDSFNVYALFGIGGGFFSAAAYIVISMLAER 196
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F ++ +F + F + ++LIG GL ++ +
Sbjct: 197 DFKSNTEIVFYFQIFSIAVGAALMKGSFTMPEGIQWVWLIGLGLFALSAQMFMTWAFQHV 256
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
V + Y+ L ++ + + + + ++V+ ++ ++
Sbjct: 257 NSLIVSFLMYSEILFHVLFGWYFWDEILTWASWLGGTLIVLGSIMLMV 304
>gi|116251728|ref|YP_767566.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256376|emb|CAK07457.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 293
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 83/291 (28%), Gaps = 5/291 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F A ++ + ++ L + V R GG+
Sbjct: 2 TSKTQGYIFALLAITIFSLQDAISKHLATAYPPIFVTMIRYWAFALFTIILAAKMRGGIK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T + + V +LAV I + + TP++ L L
Sbjct: 62 ATARTKRPL----LQVTRGVLLAVQVVLAITCFAMIGLARSQAIFSATPILIALLAMPIL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ + A + +L++ G + S + FA I
Sbjct: 118 GERVGWRRWAAIGAGLFGVLLILKPEGEFFDVKLLLAVISCFNFAFYVIATRLVSRDDSS 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M + V G ++ + D +++ + + + V
Sbjct: 178 MTSFFYTGVVGGVTMTLVGPFYWSWMSSGDWVWMALVCVTSISSHYFLIRAYDVLDAAAV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ Y + + V + + + + I IVV A + + + +
Sbjct: 238 QPLTYLSLVYASVIGMAVYDETLSLNTIIGSIIVVAAGIFTVWREHVVGSR 288
>gi|62181496|ref|YP_217913.1| hypothetical protein SC2926 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62129129|gb|AAX66832.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322715979|gb|EFZ07550.1| Multidrug resistance efflux transporter EmrE [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
Length = 304
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + A+ + + D
Sbjct: 6 RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIP-LLLAVRFLFRQRTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 VWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA I L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGICGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDSGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLTIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|229005642|ref|ZP_04163346.1| Transporter, drug/metabolite exporter [Bacillus mycoides Rock1-4]
gi|228755576|gb|EEM04917.1| Transporter, drug/metabolite exporter [Bacillus mycoides Rock1-4]
Length = 295
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 93/293 (31%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKTTKRKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + V S TP V ++ L
Sbjct: 62 TTIQINKKDWLLFAWI-GFIGYFVSITCQFVGTKLSDAHTGSLVTSATPAFMVVFATLIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE L +I++ +L L + I+ G +L A + +
Sbjct: 121 KENLTTRRILSTVLATLGVTIVIGWDIEVVSYFIGTIILVGAAITWALLSIYVKIASQQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + L L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPCMIWELQSNPIGDLNTTIILGILYLGIISTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + ++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNRNFFIGGALIIFSVIIATFEK 293
>gi|163739289|ref|ZP_02146700.1| hypothetical protein RGBS107_04536 [Phaeobacter gallaeciensis
BS107]
gi|161387359|gb|EDQ11717.1| hypothetical protein RGBS107_04536 [Phaeobacter gallaeciensis
BS107]
Length = 321
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 26/311 (8%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
++++ ASLP ++G + A + + I + +FL + +V+ R + ++ + I+
Sbjct: 1 MTQQQASLP-ILGVIAAVGAAVCFSIIDVIFKFLSGDYPLYQVVMLRSVVAMVVLLALII 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
GG +L+ + + + + F L F TP++
Sbjct: 60 PLEGGYGILRTRQPR-----LHLLRSLAVLFANLCFFTGLAIMPMAEAVAIAFATPLVVT 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L +FLKER+ + +A + +LI+ AI A +A +
Sbjct: 115 SLSVLFLKERVGPWRWMAVAIGFTGILIIMRPGPGTFQPAAILPFLGACGYATLHVLTRR 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGF-------------------SGGEHFFLGNIPDTLFL 233
+ G + P L +++ + + D +
Sbjct: 175 AGGADKAATLSFYPTLGFLLVSTLVGLTTGDGRFAGSDNAGLQFILRAWIWPEPQDWILF 234
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ GL S + S ++ + V EY A + ++ + + + D I ++
Sbjct: 235 LTVGLAGSIGGYLVSQAYRQCEAGLVAPFEYIAMPMAVIWGILVFDEWPDAPVWIGSTLI 294
Query: 294 VIAMVVYLLPT 304
+ A +V +
Sbjct: 295 IGAGLVSVWRE 305
>gi|86360166|ref|YP_472055.1| hypothetical protein RHE_PC00122 [Rhizobium etli CFN 42]
gi|86284268|gb|ABC93328.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 310
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 91/296 (30%), Gaps = 5/296 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A G L + A + W + +Y++ L V I+ R L+ + ++
Sbjct: 19 TTRLAGSEHEKGVLLIVAATLAWSASGVYSRLLTT-DVWTAIAWRSLFGGLFLLIPCLFL 77
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GG+S + + G FI AL + Y TP I+
Sbjct: 78 EGGISRRQW---RSVLHPSGLAMIACQTFSQGCFIGALYMTTVANVTMIYATTPFIAALF 134
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G + LKER+ +IA + + + ++ S I + + + + +
Sbjct: 135 GWLILKERVARRTLIAGAVSLFGVGVIV-ASSIGGGTGWGDLLALGMTASFALVIIIPRI 193
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + F + G L + S +F G KR
Sbjct: 194 DPGVPSLPPTVVSAFLTLAIFAPFGSVGSLDLHNWIVLAAFGATNFSLALVLFLAGAKRM 253
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ +L + + I++ A+ + + +
Sbjct: 254 PPAEAALIGTMEIVLTPFWVWLLFSEQPPIATYFGGAIIIGAVFWHTAVDFNRARR 309
>gi|33597032|ref|NP_884675.1| hypothetical protein BPP2444 [Bordetella parapertussis 12822]
gi|33600877|ref|NP_888437.1| hypothetical protein BB1892 [Bordetella bronchiseptica RB50]
gi|33566483|emb|CAE37739.1| conserved hypothetical integral membrane protein [Bordetella
parapertussis]
gi|33568477|emb|CAE32389.1| conserved hypothetical integral membrane protein [Bordetella
bronchiseptica RB50]
Length = 316
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/311 (11%), Positives = 89/311 (28%), Gaps = 14/311 (4%)
Query: 9 EYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPG 66
++ LS + G +L+ + +F + + +I+ R+L+++P
Sbjct: 2 NRNRQLSDPSRFSGMAAGFFMATLGAVLFSGKAIVVKFTYRYGIDAVTLIAFRMLFAMPF 61
Query: 67 VFFAIVY-FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ L + + + L L F
Sbjct: 62 FAAVAWWQARRAARGELPVLSWRERGQLCALGLLGYYLSSFLDFLGLRHITAGLERLILF 121
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH-----------SGIPLLSLAI 174
++P + V L + +LK + Q A LL + + ++ H
Sbjct: 122 LSPSLVVLLSAWWLKRPVTRRQWGAMLLSYVGVALVLSHDLSQSGAGADVLTGSFFVFCS 181
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
A+++S Y + + +L + + +I
Sbjct: 182 ALSYSVYLICSGELVERVGATRLVAYAMLVSCVASLIQFFLIHPASVLVQPAAVYGYSVI 241
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ + + + T ++ P+ ++ + + L +PI + +V+
Sbjct: 242 HATVNTVLPVFMLMWAVALVGAPTASLLGMVGPVSVLFLAAWFLDEPITVWQLAGTALVL 301
Query: 295 IAMVVYLLPTV 305
+ V
Sbjct: 302 AGVFVLAGRRR 312
>gi|89076476|ref|ZP_01162793.1| hypothetical protein SKA34_10915 [Photobacterium sp. SKA34]
gi|89047840|gb|EAR53435.1| hypothetical protein SKA34_10915 [Photobacterium sp. SKA34]
Length = 301
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/308 (15%), Positives = 104/308 (33%), Gaps = 17/308 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAI 71
++ N SL +G F+ + + + + +++ + V E+++ R + SL + I
Sbjct: 1 MTNSNESL-IPLGARFMLFSALGFALMSSTVKYVSQIGIPVFEIVAARAVVSLIISYLDI 59
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
K +LV + + YA+ T + + PV +
Sbjct: 60 --------KRKGIPVWGNNKPLLVVRGIMGTIGLSCVYYAVTTLPLAEATILQYTNPVFT 111
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFAR 185
L FLKER+ ++ L I+ L + + L + A+ A
Sbjct: 112 ALLAVFFLKERIQLSTMVCIGLSIMGLFFIVNPTTLTTGASHLPLYSVMIALIGAFVSAI 171
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I V ++ L + + ++F + ++P T+ LI G+
Sbjct: 172 SYIIVKKLSNTEDSSVIIFYFPLITLPLSLILIADNFVVPDLPTTICLIFVGIFTQVGQV 231
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ Y +L I+ I + I +++ +V L +
Sbjct: 232 GLTKAMQTQAAGKATAYSYIQIVLSIILGFIIFNEVPSIWTYIGGILIISGALVNLFGSN 291
Query: 306 INSGKNKT 313
I +T
Sbjct: 292 IIKKLKRT 299
>gi|160891312|ref|ZP_02072315.1| hypothetical protein BACUNI_03761 [Bacteroides uniformis ATCC 8492]
gi|270294555|ref|ZP_06200757.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317481180|ref|ZP_07940255.1| integral membrane protein DUF6 [Bacteroides sp. 4_1_36]
gi|156859533|gb|EDO52964.1| hypothetical protein BACUNI_03761 [Bacteroides uniformis ATCC 8492]
gi|270276022|gb|EFA21882.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316902676|gb|EFV24555.1| integral membrane protein DUF6 [Bacteroides sp. 4_1_36]
Length = 312
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 89/294 (30%), Gaps = 3/294 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + A +G+ PL+ L + V+ R L+++P + I + +
Sbjct: 6 KGYILGSIAAASYGMNPLFALPLYKAGMDPDSVLFFRYLFAIPLLGIMIKARGRSFKIQR 65
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+G+LV +++ ++ A + + VF + L+
Sbjct: 66 KETFPLIIMGLLVALSSLTLFLSYNYMAAGIASTLLFVYPIMVALIMAMVFKEKLALQTI 125
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ L + + ++ + S I L + + A +
Sbjct: 126 VCMLLALGGIGLLYKSEDGSTLSLIGTLLVFASSLSYAIYIVGINQTSLKNVATLKVTFY 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDT-LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + L V G L + F + I+ + I
Sbjct: 186 VLLFGLSLFVARLLYSGVLNTPDQWYLWANLLALAVFPTAISFLCTTGAIQYIGSTPTAI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ P+ I + + + + + ++++A+ + I S + +K
Sbjct: 246 LGALEPVTAIFFGIAVFGESLTVRESFGLVMIIVAVTFVIAGGNITSQLVRFRK 299
>gi|323484448|ref|ZP_08089814.1| hypothetical protein HMPREF9474_01565 [Clostridium symbiosum
WAL-14163]
gi|323402226|gb|EGA94558.1| hypothetical protein HMPREF9474_01565 [Clostridium symbiosum
WAL-14163]
Length = 306
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 98/306 (32%), Gaps = 18/306 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV------ 72
+ + G+++ + I++G P+ ++L E + + ++ +R +LP + +
Sbjct: 1 MKELKGSVYAVISAIIFGCMPIVAKYLYAEGCNPVSLVVYRYSLALPVLLILALREQGKD 60
Query: 73 -----YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+ + +T ++ + + +F
Sbjct: 61 ERERKAAGEPSKRDSGMRITMSQLRQFIILSTGFSLTPILLFSSYNYISSGSATTIHFSY 120
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYC 182
PV+ + KE+ +I + + ++ L++ + + VT++ Y
Sbjct: 121 PVLVILASVFIFKEKATWTKIASVVFCVIGLVLFYEPGQANGAAGILLALASGVTYTFYM 180
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + + F + + A+ V + +G F +L
Sbjct: 181 MYFERSTLKFMKPFKTNFYMSLVSAVMVFVLSLATGTFVLFHSIRGWAAAFGFSFMLIVV 240
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+F GI I+ PL IV V + + I ++ +++ L
Sbjct: 241 ACVLFQLGIAMTGAQKTAILSTFEPLTSIVLGVVCFGEAVGIKTGIGVAFILASVISITL 300
Query: 303 PTVINS 308
N+
Sbjct: 301 FGRKNA 306
>gi|218782204|ref|YP_002433522.1| hypothetical protein Dalk_4375 [Desulfatibacillum alkenivorans
AK-01]
gi|218763588|gb|ACL06054.1| protein of unknown function DUF6 transmembrane [Desulfatibacillum
alkenivorans AK-01]
Length = 284
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 87/285 (30%), Gaps = 9/285 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L++ A +LWG+ +++ E V +E+ R +
Sbjct: 2 RVKGYLYIAAAAMLWGMLGPFSRLALSEGVQPMEIAFWRATLAWGFFATHAAAARTVRMS 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++D +F+ + +G + A+ + + + P + K
Sbjct: 62 VRDFP------MTALFALVGVTAFYGSYQIAIRAGGAAMAAVLLYTAPAWVCVIARFTFK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER +I+A ++ + + I + + +A +G
Sbjct: 116 ERFTRPKILALAFTLIGVACVAGGGGSIQVTWSGVLFGLTAGFCYSLYYIIGKHFSDKYS 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L + L F E T L + ++ G+K + S
Sbjct: 176 APNLFLYMLPIGAITLFPWVEFSPKSPTAWTALFCIAALCTYAAYFLYYIGLKHLEASRA 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I P++ V + F + +++ ++++ +
Sbjct: 236 AITATIEPVVAAVVAFFWWGESFGLTAYAGSALILSSVLLIIRDR 280
>gi|322418565|ref|YP_004197788.1| hypothetical protein GM18_1037 [Geobacter sp. M18]
gi|320124952|gb|ADW12512.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M18]
Length = 361
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 88/299 (29%), Gaps = 4/299 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + LP G LF + +L+G++P++ + L +S + L S G+ ++
Sbjct: 8 NRRDHQLPAFTGQLFAILSAVLFGVSPVFCKLLIGDMSPALLAGLLYLGSGLGLQSVLLV 67
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + ++ + V + + S + V +
Sbjct: 68 QRKKSLEELRRLSPRHRLKLVGAIISGGIVAPVSLAFGIKYGAASEVSLLLNLETVATTL 127
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTL---HSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ + KE + +LI++ ++ L LS + + + +
Sbjct: 128 IAWLVFKEYIGPYVWSGKVLILIGACLVVLRAEGGLSFSLSGLLVIIACIFWGIDNNLTR 187
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
E + + + A L L +F
Sbjct: 188 DVDEISSMVLASVKGLAAGLFSVALALLFSGGPATTGQVAGTLAVGALSYGLSLVLFVEA 247
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+++ + P + SV +L + I +++ + + L +
Sbjct: 248 LRKIGAARTATFFAVGPFFGTLLSVALLGERPPMPYWIATVLMLAGIFLLYLEVHRHRH 306
>gi|329667953|gb|AEB93901.1| putative permease [Lactobacillus johnsonii DPC 6026]
Length = 304
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 96/303 (31%), Gaps = 12/303 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 3 KQSKSRLWTILAALAAVMWGISGLFAESLFKVSSKITPIWLTQVRLIISGIVLLIIATVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ ++ + L F+ A+ + + F+ P +
Sbjct: 63 --HQKPFSVLKDKKNTLHIIAYGIFGLLPVQVFYFIAIEMANASIATILQFIGPFFVLTY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTI 188
+V ++ L L ++AA+L + + +++ H PL ++
Sbjct: 121 LAVTHQQVLRKLDVLAAILAFIGVFLLSTHGNFNQLAITPLALFFGLLSAVGEASYTLIP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + + F I +
Sbjct: 181 VKLVKRVSSLVVTGWGMLFAGIGLMIVYPRFPAIPNTPRAWLDVSAIIIIGTIIPFQIMA 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K STV +++ PL V SV I + + + +V+ A++ N
Sbjct: 241 NALRYVKPSTVSLLDAFEPLSATVGSVLIFGLVMSGMDWLGTLLVIGAVLALNFTPKRNI 300
Query: 309 GKN 311
K
Sbjct: 301 KKK 303
>gi|219871423|ref|YP_002475798.1| DMT superfamily drug/metabolite transporter [Haemophilus parasuis
SH0165]
gi|219691627|gb|ACL32850.1| DMT superfamily drug/metabolite transporter [Haemophilus parasuis
SH0165]
Length = 293
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 120/295 (40%), Gaps = 6/295 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSL 80
+ G F A IL+G+ + L+ +S E+ R+ SLP V A+ F
Sbjct: 2 IKGITFSVTASILFGVLYYLSTHLKPLSGEEIYGFRMWVSLPFVISALFIFKKTDEFNRY 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK ++P + +L+ + + + F+YA S Y + P+ V +G
Sbjct: 62 LKRLKQHPHLILVLLTTTAVTGLQMWLFLYAPNNGYAIDVSIGYLLMPIAMVAVGRFLFN 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ L+II+ + + + I + +G + + + F+ + S F+
Sbjct: 122 ETLSLLKIISIISASVGVFITLITAGSLSWATLMVLIGYPVYFSLRKHFDMSHLSSFVCE 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L +P Y + N N L G+++ + ++ +G
Sbjct: 182 IILMLPIATYFMLNTDMQFVTENNPNFYFWLV--LLGIVSGTALIGYIMASSLVPINVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ Y PL ++ FI+ + +D I+ +++++ + +L +I K + ++
Sbjct: 240 LLSYIEPL-AMLIVAFIIGEVLDQSSYILMACLMLSICLLVLDGIITIRKQRRRE 293
>gi|153953402|ref|YP_001394167.1| transporter protein [Clostridium kluyveri DSM 555]
gi|146346283|gb|EDK32819.1| Predicted transporter protein [Clostridium kluyveri DSM 555]
Length = 297
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 81/280 (28%), Gaps = 14/280 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
A +LWG + + L + ++S R S + +
Sbjct: 12 IALGLIA-LLWGTSYAIIKDILSDIRPFTLMSLRFGISTIFLCVIFPKKLRNIRKKDILH 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + + + + SF +I FLG + K+ N
Sbjct: 71 GSII--------GIFLFLAFLNLVTGIFYTTASKQSFLVGSYVLIVPFLGWIIYKKPPNI 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLL----SLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ A+L + + ++TL+ + + A S+ +
Sbjct: 123 YSVFGAVLAVFGIGLLTLNGSFYINKGDSISILCSLSFACHMIAIEYFNKDSDPIVSTII 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ +++ G +L + F + + K ++ +
Sbjct: 183 QFLVTSILFIILTGIFESFTIYLSSKVLKSIAYLTIFTTVIPFVVQNIAQKYISSTSTAL 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + +V +L + + I ++ +++
Sbjct: 243 ILTLESAFGGIFAVILLNEILSFQMLIGCVLIFTGIIIQT 282
>gi|39995681|ref|NP_951632.1| hypothetical protein GSU0574 [Geobacter sulfurreducens PCA]
gi|39982444|gb|AAR33905.1| membrane protein, putative [Geobacter sulfurreducens PCA]
Length = 308
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 94/305 (30%), Gaps = 14/305 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV---SVLEVISHRVLWSLPGVFFAI 71
+ A + G + + +LWG + T+ L + + L + R+ ++P + A
Sbjct: 3 TASRAHADSRHGLFLILFSAMLWGTVGITTKALYGLADTTPLSIGFFRLALAVPVLVAAC 62
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+G M+V A +F T + PVI
Sbjct: 63 RLATGPAMFRVA---RRDLGTMIVVGAMTALYQVCYFAAIRQIGVAAATLVTLCTAPVIV 119
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCF 183
L ++ ER + +++ + ++ + ++ A+ +S
Sbjct: 120 ALLSAILTGERPSGRVLLSLACALAGTALLVGLRPLAGEGGNIPLGIAQALGSAFSYASV 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + + +++ + G L L + +
Sbjct: 180 TVASRTLAGRYHPLQPVAIGFAAGALFLLPTALADGLVLTYPAAGWVLLLYLGVVPTALA 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +F G++ + I PL+ V + I + + + + ++ A+ + P
Sbjct: 240 YALFLAGMRTTTATAASICTLLEPLVSTVLAWLIFGERLGPLGAVGAVLLFGAIGLLARP 299
Query: 304 TVINS 308
Sbjct: 300 VRRRQ 304
>gi|119468933|ref|ZP_01611958.1| hypothetical protein ATW7_04197 [Alteromonadales bacterium TW-7]
gi|119447585|gb|EAW28852.1| hypothetical protein ATW7_04197 [Alteromonadales bacterium TW-7]
Length = 333
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 94/283 (33%), Gaps = 17/283 (6%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A LWG + + ++ + VI R+L +L +++ +
Sbjct: 19 LCLIIATFLWGSSFIALKYAIAIYDPALVIFLRMLTTLVISLCL------WRYVIRFEYQ 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ S +++ F +A+ P+I FL LKE ++
Sbjct: 73 KGDWKYLVGMSLAEPCLYFLFEGHAMEYTSASQAGVIVSCLPIIVAFLAFFMLKEYISKA 132
Query: 147 QIIAALLIILSLLIMTL--HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ L I +++TL S + + S + L
Sbjct: 133 IVVGFTLCIGGSILLTLLSPSSEQAPNPILGNFLELMAMVCAAFYTVSIKHLANRYSPLT 192
Query: 205 IPALFYVVWNGFSGGEHFFLGNIP--------DTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ AL + + F FF+ L + + +++Y I + +
Sbjct: 193 LIALQGISGSLFFAPFLFFIDLPSENQHDLTALMSILYLGSCVTLGGYGMYNYAISKVSV 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T P+ ++ S IL + + + + +V I ++V
Sbjct: 253 LTAAAYSNLIPIFTLILSAIILGEVLTLWQWLSIFVVFIGVMV 295
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 33/103 (32%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + + + F + F + ++ S
Sbjct: 47 VIFLRMLTTLVISLCLWRYVIRFEYQKGDWKYLVGMSLAEPCLYFLFEGHAMEYTSASQA 106
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G++ P+++ + F+LK+ I + F + + ++ L
Sbjct: 107 GVIVSCLPIIVAFLAFFMLKEYISKAIVVGFTLCIGGSILLTL 149
>gi|83646350|ref|YP_434785.1| DMT superfamily permease [Hahella chejuensis KCTC 2396]
gi|83634393|gb|ABC30360.1| predicted permease, DMT superfamily [Hahella chejuensis KCTC 2396]
Length = 323
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/306 (10%), Positives = 92/306 (30%), Gaps = 14/306 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ P G + + A IL+G+ + L +S L++ + R + + A++
Sbjct: 4 NHPFAFGIIAITVAAILFGVAGALAKVLFHADISPLDLTAVRSIVACAVFSLAMLLT--- 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
A+ +L+ + F YA+ + P + + V
Sbjct: 61 --QPGVFRIKKSALPLLIATGLAFTAVNITFYYAISMISVAAAITLEYTAPFFVLLISVV 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPV 190
R++ + L + ++T A + ++ +
Sbjct: 119 SASRRVDARDVGIVALSVAGCFLLTGGEAELFSLNAGVLVGLACGLAFAVFNMLGNACKR 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + I + ++ + + + YG
Sbjct: 179 RGVGATTVTLYAFLISSALWLAALPTLTVHEIDYSGDVILYIAFIAIIATIIPYWLLMYG 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ I+ PL+ + + ++ + + V + G++++A+ + +
Sbjct: 239 LRHVDALPATIIGMFDPLVAGLVAYALVGERLTVVNMVGIGVIIVAVCLITIKEKNAPSS 298
Query: 311 NKTKKS 316
++ +
Sbjct: 299 SQKNNA 304
>gi|150389014|ref|YP_001319063.1| hypothetical protein Amet_1196 [Alkaliphilus metalliredigens QYMF]
gi|149948876|gb|ABR47404.1| protein of unknown function DUF6, transmembrane [Alkaliphilus
metalliredigens QYMF]
Length = 314
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 98/300 (32%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G L + A ILWG L + L ++ ++ ++L +F +
Sbjct: 4 NDRTKGYLLIALASILWGTMGLVGKLLFSYELRPQDITFWKLLIGFIMMFVYLYIKKIDS 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + A++ F A+ + + P+ + +F
Sbjct: 64 IKIDRCG----MWQLALVGLFCQALYNLFIFSAIEKTTIATATILLYTAPIFVTIMARIF 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIPV 190
KERL +++A L IL + ++ A A +
Sbjct: 120 YKERLTSYKVVALLFCILGCYLTITGGSLGAIKLDTEGMMLGLGAGFTYALTTITSRALL 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ I + + ALF +++ + F I + + + ++ G
Sbjct: 180 KRYSQWTILLYIFGFGALFSLLFANPTTVFQFGFNLNIWLGLFILGLVPTTLAYGLYITG 239
Query: 251 IKR-AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + S GI+ ++ +++S L + I + I +V+ ++++ +
Sbjct: 240 LSYEVESSKAGIITTLEVVVAVLASYVFLGEVILGWKLIGVIMVLCSVIIVQSDQYLTGK 299
Score = 39.5 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 39/113 (34%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I L I + V+ + + + + I++ ++
Sbjct: 40 ITFWKLLIGFIMMFVYLYIKKIDSIKIDRCGMWQLALVGLFCQALYNLFIFSAIEKTTIA 99
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T I+ YTAP+ + + + K+ + + + + ++ + + + + K
Sbjct: 100 TATILLYTAPIFVTIMARIFYKERLTSYKVVALLFCILGCYLTITGGSLGAIK 152
>gi|167759442|ref|ZP_02431569.1| hypothetical protein CLOSCI_01789 [Clostridium scindens ATCC 35704]
gi|167662999|gb|EDS07129.1| hypothetical protein CLOSCI_01789 [Clostridium scindens ATCC 35704]
Length = 299
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 76/295 (25%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL- 78
+ G + V A +WG + ++ + R L + I F G
Sbjct: 1 MKIKNGIMLVLTA-FIWGTAFVAQSVGMDYLGPFTFNGVRSLIGGAALLPCIWLFQKGNG 59
Query: 79 --SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L + F VI LG
Sbjct: 60 KDPEKRSGGARKDLIAGGIACGFLLFAASSLQQIGIQYTTAGKAGFITAFYIVIVPVLGI 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTL----HSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
K+ + A + + L + + G + + + +
Sbjct: 120 FLHKK-IGWKVWGAVTIALAGLYFLCITEKVAMGKGDILIFLCALVFSIHILVIDYFSPK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+G + + + + F L L + + G K
Sbjct: 179 VDGVKMSCIQFFVCGIVSLPPMFFKETPKIGAMVEGWAPLLYAGVLSCGVAYTLQIIGQK 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ +++ +L + + ++ ++ A+++ LP
Sbjct: 239 NVNPAVASLILSLESCFSVLAGWMVLGEKLSVRESVGCVLMFAAIILAQLPDRKK 293
>gi|294498976|ref|YP_003562676.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Bacillus megaterium QM B1551]
gi|294348913|gb|ADE69242.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Bacillus megaterium QM B1551]
Length = 296
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 95/281 (33%), Gaps = 8/281 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + CA +LWG T + + + + R+ + A + + ++
Sbjct: 8 ILILCAAVLWGTTGTAQALASSEAHSVAIGAVRLAVGGLSLLAACLI---QKKKVDVDVR 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + V +A++ A FF + T T + P++S L + ++
Sbjct: 65 RLPILPLTVAAASMAAYQPLFFSAVIKTGVAVGTMVAIGSAPLLSGVLNYIVYSKKPTKK 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV---- 202
++A IL + L + + + + A V +++ V
Sbjct: 125 WLLATFTGILGCCCLLLKKDSQIDVIGLGMAIGAGASFACYTTVNKKIVQYVDPQVGASL 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ A ++ F + + + L L + + +FS +K ST +
Sbjct: 185 VFTTAAVLLIPCWFMYDMSWLVSLNGIGIALHLGILTTALAYVLFSTALKSVHASTAVTL 244
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + VF+L + + V +V +++
Sbjct: 245 SLAEPVTAFLLGVFLLGESLTLVNICGAVLVFVSLAFLTYS 285
>gi|161520350|ref|YP_001583777.1| hypothetical protein Bmul_3801 [Burkholderia multivorans ATCC
17616]
gi|189353473|ref|YP_001949100.1| drug/metabolite transporter (DMT) superfamily permease
[Burkholderia multivorans ATCC 17616]
gi|160344400|gb|ABX17485.1| protein of unknown function DUF6 transmembrane [Burkholderia
multivorans ATCC 17616]
gi|189337495|dbj|BAG46564.1| drug/metabolite transporter (DMT) superfamily permease
[Burkholderia multivorans ATCC 17616]
Length = 319
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P + +
Sbjct: 5 KTRLIGYLYLAAAMAGVGSTVIASRVAAGGLPPFAATALRFLIATPLLLALM----RMRR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L AV +++ +A + IY P +S + +V L
Sbjct: 61 LRWTRPSTRDAVLLVIQAAAGGVGYTVLLIYGTKLASPIDAGVMLGTLPAMSTLIAAVVL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPV 190
+ER +AA L +L +T G + S+ AV A
Sbjct: 121 RERQTRRDWVAAALATSGVLFVTFAPGHAMPSMRALVGDALVLAAVACEAVFILLNRRLT 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSG-GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + A+ + ++ F + + + +
Sbjct: 181 VPLPPLTLSAAMSALGFVLALIPAAFEWRAVVSGWTFGAVSAIAYYALVPTVLGYVCWYA 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + R +VV ++V
Sbjct: 241 GSARTSGTEAALFTAIAPVSAVLFAVVLFGDALTATRIAGIALVVAGVLV 290
>gi|153000034|ref|YP_001365715.1| hypothetical protein Shew185_1502 [Shewanella baltica OS185]
gi|151364652|gb|ABS07652.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS185]
Length = 292
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 89/293 (30%), Gaps = 12/293 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ + +F A IL G + +F + + +R++ + ++ G +
Sbjct: 3 SSALAIIFALLAAILMGTIGVLARFAA-LPAEHITFYRLMLGALFLLAYMLLTGKGQQIR 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K +LA F+I A+ Q ++ PV+S F E
Sbjct: 62 HRPSKRTLVN------GAMLAGFMAFYIEAIQYTQMANVIMIIYLAPVVSAIFAHYFFAE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAYCFARKTIPVGSSEGF 196
+L L + + ++ ++ ++M + + + +
Sbjct: 116 KLTRLSMASVVVALMGFMLMIPTGPQQASNHTELLGYFYALLALLTYCGFMLINRKPSLS 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L ++ + + + +++
Sbjct: 176 SPYQSTLVQLSVGALCLLPLVINAPLTPSLPQIVWLIAIGFFPGFLAILLAVKALRQLPA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T G + Y P++++ + +I + + ++ G++++A + +
Sbjct: 236 VTFGTLAYVEPVIVVTLAWWIFGESLSPMQLSGVGLIILAGISQGFISQRKVR 288
>gi|326780632|ref|ZP_08239897.1| protein of unknown function DUF6 transmembrane [Streptomyces cf.
griseus XylebKG-1]
gi|326660965|gb|EGE45811.1| protein of unknown function DUF6 transmembrane [Streptomyces cf.
griseus XylebKG-1]
Length = 393
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + E + +V R+L + A+ L T +
Sbjct: 53 SLIWGFSFLLIKVGTEGYAPFQVTFGRLLAGTAVLVAAMAMRRERLPRSARTWGHLTVAA 112
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L+ + + + + + + L R + L
Sbjct: 113 LLLNALPFSLFSYAELTIPSTLAGICNATSPLWGMALSVIALSEDRPTRRRVAGLGVGFL 172
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L SG+ L +A+ S + G + L +
Sbjct: 173 GVLTVLGAWQGFSGLDLPGTGMALLASFCYPVGWIYVRRTLAGTGASTLALTGSQLFLGT 232
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L V +P L GL + ++ +T ++ Y P
Sbjct: 233 LQLAVVTPVFTSAPTSFPLLPTLSVLALGGLGTGLAVLLQYGLVQEVGPTTAQMVTYFIP 292
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + V +L + + + IV++ +
Sbjct: 293 VIATAAGVALLGEQLAWNTPVGALIVLVGAAL 324
>gi|160940420|ref|ZP_02087765.1| hypothetical protein CLOBOL_05310 [Clostridium bolteae ATCC
BAA-613]
gi|158437000|gb|EDP14767.1| hypothetical protein CLOBOL_05310 [Clostridium bolteae ATCC
BAA-613]
Length = 335
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 93/275 (33%), Gaps = 12/275 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + + +G + + + + E+ +R L + +F + G +
Sbjct: 5 LEIIGSMAAFGTIGAFVRHI-PLPSGELALYRALIAAGAIFLWQLCSGQGTGIKDA---- 59
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ +L+ S + ++W F A + + SY+ PVI KE+L Q
Sbjct: 60 KAELHLLILSGAAIGINWILFFEAYRYTTVAMATLSYYFAPVIVTVASPFLFKEKLTARQ 119
Query: 148 IIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ ++ L L+++ S + + + + G
Sbjct: 120 VFCFIMSTLGLVLVIGVSRGGSSSDLIGILFGLGAAVFYASVVLLNKSIRHVSGINRTFF 179
Query: 202 VLAIPALFYVVWNGFSGG-EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + +GG + + L+ +C++ ++ K
Sbjct: 180 QFLAAILVLTPYVCLTGGSHLLDMDALGVINLLVVGVFHTGICYCMYFSSLRYLKGQEAS 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
I+ Y PL+ I+ SV L + I + + G+++
Sbjct: 240 ILSYIDPLVAILVSVTFLHETITVFQVVGGGMILG 274
>gi|152988358|ref|YP_001345719.1| hypothetical protein PSPA7_0323 [Pseudomonas aeruginosa PA7]
gi|150963516|gb|ABR85541.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 292
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 85/285 (29%), Gaps = 5/285 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G + A L+ ++FL + ++ + + GL+++
Sbjct: 13 QPLRGIFLICAAVFLFASHDGLSKFLSGFYPIVMVVWARYLVHTLLMVVVFVPRNGLAVI 72
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + L T L L + F+ P++ L LKE
Sbjct: 73 RTRRPFMQLARALCLIGTSLFFT-----TGLRYLPLAEATAVNFLAPLLVTALSVPLLKE 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++ Q +A L + +L + G A+ SA CF +
Sbjct: 128 KVSPGQWLAVLTGFVGVLFIVRPGGALFTPAALFPLGSALCFGLYQLLTRMLANSDSPTT 187
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ +F + + ++ L +I G + + + A +T+
Sbjct: 188 SNFLAGIFNTLIMSLLVPFFWQTPSLLHGLMMIALGGCGMGGHLLLTQAFRHAPPATLAP 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y + + + + D + ++ + ++
Sbjct: 248 FSYGQIIFAGLLGLLVFGHAPDAWALLGILVICASGLLVAWRRGR 292
>gi|329891121|ref|ZP_08269464.1| hypothetical protein BDIM_28320 [Brevundimonas diminuta ATCC 11568]
gi|328846422|gb|EGF95986.1| hypothetical protein BDIM_28320 [Brevundimonas diminuta ATCC 11568]
Length = 334
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 120/283 (42%), Gaps = 4/283 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
Y+LWG PL Q + + E++ HR +W L +V S + + +
Sbjct: 19 GVLCYLLWGFIPLVFQQMAHQGANAWEIMGHRAVWGLVW-ALILVMLSRQWAQVVAVFRQ 77
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
P+ +G L SA ++A +W ++ A+ + S Y++ P++++ G+ +ER++
Sbjct: 78 PRVLGWLALSAVLIAANWTTYVMAVNNGRTLDASLGYYLNPLLNMAAGAWLFRERIDRFG 137
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+IA +L + +++ + G + A + ++ C+L
Sbjct: 138 VIAIVLAAIGVVLQAVALGHMPWVSLLLAFSFAGYGIIRKRVSVDAQTGLFMECLLLALP 197
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
V + G+ F + T +L+ G +F++ +R LS++G +++ AP
Sbjct: 198 GLAWVVFIEATGQGHFTASPAATAWLLFAGPATVIPLALFAWAARRMPLSSMGFLQFLAP 257
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ V + + ++R F + + V+ L V+ +
Sbjct: 258 TIVFVIGALQ-GEALGSLRIASFAFIWVGAAVFALGAVLKVRR 299
>gi|71898285|ref|ZP_00680459.1| Protein of unknown function DUF6 [Xylella fastidiosa Ann-1]
gi|71732024|gb|EAO34081.1| Protein of unknown function DUF6 [Xylella fastidiosa Ann-1]
Length = 311
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 100/291 (34%), Gaps = 8/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + + + +G+ + ++ Q+ E+ R + L + I+ L
Sbjct: 6 QLPLRAAMLMLFSTLSFGMMAITIRYASTQIPTTEIAFFRNAFGLLVLLPLILGPGKPLP 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + +A+ + TP+ + L S++L
Sbjct: 66 RTQHGPRYIARSML-------GLISMLCNFWAISHLPLTQAITLSYSTPLFATILASLWL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++A L +L++ + +A A TI +
Sbjct: 119 HEVVRLRRLLAILAGFAGILVLLQPWSGTFSPALLVALAAALLNAVITIQMKQLSHLDPP 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V+ F+V + + + ++LI G+ + ++ ++ ++ST+
Sbjct: 179 DTVVFYTYAFWVPLSLLLALWQWHWPEGVEWVWLIATGIFGTIGQLLWIRALRLGEVSTL 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + L+ + ++ + +D + I++ A V + + +
Sbjct: 239 QPIGFMQLPLVTLLGWWLFGEHLDRYTALGASIIIGANVYITHREAVLARR 289
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 38/141 (26%)
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
M +PL + + + + +S A +V G
Sbjct: 1 MVTQGQLPLRAAMLMLFSTLSFGMMAITIRYASTQIPTTEIAFFRNAFGLLVLLPLILGP 60
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
L I +L + I L+ + Y+ PL + + L +
Sbjct: 61 GKPLPRTQHGPRYIARSMLGLISMLCNFWAISHLPLTQAITLSYSTPLFATILASLWLHE 120
Query: 281 PIDTVRTIVFGIVVIAMVVYL 301
+ R + ++V L
Sbjct: 121 VVRLRRLLAILAGFAGILVLL 141
>gi|332653459|ref|ZP_08419204.1| putative transmembrane transporter [Ruminococcaceae bacterium D16]
gi|332518605|gb|EGJ48208.1| putative transmembrane transporter [Ruminococcaceae bacterium D16]
Length = 311
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 81/302 (26%), Gaps = 16/302 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L + WG T + T+ LE + LE++ R + + A
Sbjct: 1 MESKLSFGHLAALFTVVNWGTTFIATKVLLEAFTPLEILIFRFVLGYVALAVAC-----P 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K + L T S L
Sbjct: 56 RRLKVGDWKKEGLFAAAGLTGVCLYYLLENIALTFSTASNVGVIVSASPLFAALFSLVLS 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP----------LLSLAIAVTWSAYCFARKT 187
+R + LL + + +++ + +++ + +S +
Sbjct: 116 RGADRPKWNFLGGFLLSMGGICLISFNGSQMSLDLRGDLLAVIAAMVWAVYSLLTKKIGS 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + F + L + F +
Sbjct: 176 FGWNVILTTRRIFFYGILFMIPASAFLPFRWDLGRLANGSYAAMLLYLGLGACAMCFVTW 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y IK + Y P++ ++ SV IL + ++ + + + + +V+ ++
Sbjct: 236 NYAIKTLGPVKTMVYIYLVPVITVICSVLILHETVNVLSGVGTALTLAGLVLSQWDSLKA 295
Query: 308 SG 309
Sbjct: 296 LR 297
>gi|259418206|ref|ZP_05742124.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259345601|gb|EEW57445.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 318
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 98/277 (35%), Gaps = 7/277 (2%)
Query: 34 YILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y ++ + +++ +VS +++ L S P + +V P G
Sbjct: 13 YGIFSTHDVVVKYVSAEVSAFQIVFFSSLLSFPLLTLMMV------RDATPGTLRPNRPG 66
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + +A+ YA T F TP + L L E++ ++ A +
Sbjct: 67 WIALRSLAMAIIPACAFYAFSVLPLAQTYALLFATPFLITILSIPLLGEKVGLPRMAAVI 126
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ +L++ L A +A+ A +++ + + ++ P L VV
Sbjct: 127 AGFVGVLVVLRPGETELGLGHAAALLAAFGNAFQSVILRKLRHVERRVVLMLFPILTTVV 186
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
G + + L+ + Y + + V M+Y+ + I+
Sbjct: 187 VMGVALPFVYVPLTGAQMGGLVIISAFGFCATLLLVYSYSLGESAVVAPMQYSQMIWAIL 246
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
VF+ ++ +D + + GI++ + V +L
Sbjct: 247 FGVFLFQESVDLLTILGAGIIIASGVFIVLREARGGR 283
>gi|126741016|ref|ZP_01756699.1| membrane protein [Roseobacter sp. SK209-2-6]
gi|126717942|gb|EBA14661.1| membrane protein [Roseobacter sp. SK209-2-6]
Length = 345
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/311 (14%), Positives = 98/311 (31%), Gaps = 13/311 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAI 71
+ K S M+ A L+ + + + V E + R +++P + +
Sbjct: 32 AMVKSLTSHRPMVAISLKVTAIALFTGLSALIKAVSETVPAGEAVFFRSFFAIPVIVVWL 91
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
Y L V+ + G L + + TP+ +
Sbjct: 92 AYRGELRHGLITK-----KPMFHVWRGLVGTSAMGMTFMGLALLPLPEVTAIGYATPIFT 146
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFA 184
+ L ++FL ER+ ++I A L ++ +LIM + + V +
Sbjct: 147 LVLAAIFLGERIRLIRISAVALGLIGVLIMIWPRLGGGTGMTEGATLGVLLVLGATVARG 206
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
I + ++ +L + + + L + LIG GL+
Sbjct: 207 FVQIHIRRMVQSEHTAAIVFYFSLTASALSLLTLPFGWVLPDAKTFALLIGAGLVGGVAQ 266
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + A S + +Y + L IV ++ V +V+ ++ +
Sbjct: 267 ILVTSSYRFAPASMLAPYDYVSMLFAIVIGYLWFEEWPTLVMLAGAALVIAGNILVIWRE 326
Query: 305 VINSGKNKTKK 315
+ K
Sbjct: 327 SRLGLERGKAK 337
>gi|57641727|ref|YP_184205.1| DMT family permease [Thermococcus kodakarensis KOD1]
gi|57160051|dbj|BAD85981.1| permease, drug/metabolite transporter (DMT) superfamily
[Thermococcus kodakarensis KOD1]
Length = 281
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 99/272 (36%), Gaps = 4/272 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
V + ++WG ++ + L +S L V RV +F I L L + +
Sbjct: 7 VVVSMLIWGSVGIFGR-LSGLSGLGVAFARVFLGALVLFMVIGLTRMEL-LRELPMIFRS 64
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
L+ T LA++W F A Y++ P+++ + FL E ++ +
Sbjct: 65 NWKPLLGLGTALALNWAFLFTAFNYTTIANAVMVYYIAPILATLMSWRFLGETIDRKTLS 124
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM--CVLAIPA 207
+L L L+++ I + A+ A + + F E+ +L +
Sbjct: 125 LIILAFLGLILIMSGQEISFENRDFVGILLAFTAAFFYAMIPNLGRFLKEVDGKILTLSQ 184
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + +G L+ + F ++ G+K ++ ++ Y P
Sbjct: 185 LGIASFVLLPFVLLQDVGKPVWWTVLVLVLIHTVFALFLYMEGLKEVEVKDAALLSYLDP 244
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+V + + + T I ++++A +
Sbjct: 245 ASAVVYAFLVFGEVPGTRTVIGGVLILLASAL 276
>gi|257094283|ref|YP_003167924.1| hypothetical protein CAP2UW1_2712 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046807|gb|ACV35995.1| protein of unknown function DUF6 transmembrane [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 319
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 14/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +LW I + +++LE EV R L++ + A++ G
Sbjct: 1 MSHRRAVALMILVALLWSIAGVVSRYLESAGSFEVTFWRSLFNTLALSVALLAMRGPALW 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ FS +V + F+ A+ + + P+I+ +FL
Sbjct: 61 RGLAQASWPL----WFSGFCWSVMFTAFMLAITLTTVANVLVTMAIGPLITALFTRLFLN 116
Query: 141 ERLNHLQIIAALLIILSLLIMTL----------HSGIPLLSLAIAVTWSAYCFARKTIPV 190
RL +A L + + M + + L A V
Sbjct: 117 HRLPARTWMAIALAGVGIGWMFWQEAHSGLSLAGTSVALAVPLAAALNFTTLQHVGHRQV 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+M + F L + + + +
Sbjct: 177 DGDTATRQDMLPAVLIGALLSSAFTLPLAYPFRASAHDIGLLAMLGVVQLAIPCLLLVRL 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + ++ + + + + +V+ A++
Sbjct: 237 SRVLAAPEIALLGLLEVVFGVAWAWLGAGEQPGASTLTGGALVLGALI 284
>gi|241889457|ref|ZP_04776758.1| transporter [Gemella haemolysans ATCC 10379]
gi|241864000|gb|EER68381.1| transporter [Gemella haemolysans ATCC 10379]
Length = 295
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 104/292 (35%), Gaps = 11/292 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
G +F WG++ + ++L ++ + +I++R+ +S + A+++
Sbjct: 3 QSTMKKGIVFTLLGATCWGLSGVLGEYLLNISKIDPVWIIANRLFFSGIVMV-AMLFLKD 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L++ + +L FS L + G F + + + ++ PVI +
Sbjct: 62 KNNLVRVFSDKKDILKLLNFSFFGLLICQGTFFLTIKYTNAGMATVIQYIGPVIIMLYYC 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIP 189
V + ++IA ++ + +++ H L + + + +I
Sbjct: 122 VIGRRWPLPREVIAIVVSLFGTVLIATHFDFSKLNISTLGLFWGLLSAFGLASYNIFSIS 181
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + G M + + V + S I + F +
Sbjct: 182 LTTKYGVMPIMAWGLLFSGIVVYFLTGSYYIPDNFKLIDLICMSGVILVGTILSFSTYLE 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G++ T I+ P+ I+ S +L T+ I G ++ A++V
Sbjct: 242 GVRLIGAVTGSIIGCFEPIAAIMFSFLLLGTTFGTIDLIGAGFILSAVIVLS 293
>gi|114764193|ref|ZP_01443431.1| hypothetical protein 1100011001320_R2601_09907 [Pelagibaca
bermudensis HTCC2601]
gi|114543345|gb|EAU46361.1| hypothetical protein R2601_09907 [Roseovarius sp. HTCC2601]
Length = 323
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 91/293 (31%), Gaps = 9/293 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L + ++ +G T + L ++ L+V+ R L GV + +
Sbjct: 22 NMKGILLITLGFLFFGATDAMAKLLTTELPPLQVVWMRQLGLFSGVVVMLAMRGFQVMRT 81
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + SAT + + + F+ P I +G +FLKE
Sbjct: 82 RHPAAQISRGVLATCSATFFILA-------VQHVPLADATAVTFIAPFIVTVIGGLFLKE 134
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + A + L ++I+ + +A FA + I G
Sbjct: 135 PVGWRRWAAVAVGFLGMMIVIRPGMGVFHPAIFLIVAAATAFATRQILSRVLSGDDTIAT 194
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF-CIFSYGIKRAKLSTVG 260
+A ++ + + + L + + A+ V
Sbjct: 195 TVAYTSITSTALLTLPIPFVWEMPTEGWIWLVAAAMALCAATGEIFIIRALDVAQAVVVA 254
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
M+Y+ L + + D + I+V + + L + + + +
Sbjct: 255 PMQYSMILWSTLYGFLLFADLPDLWTLVGCAIIVASGLYTLNRERVVARRQRK 307
>gi|110679302|ref|YP_682309.1| integral membrane protein, putative [Roseobacter denitrificans OCh
114]
gi|109455418|gb|ABG31623.1| integral membrane protein, putative [Roseobacter denitrificans OCh
114]
Length = 301
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 97/296 (32%), Gaps = 8/296 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + G ++ I + +F+ + ++ R L L + AI
Sbjct: 2 SMTKTSQPLTGIFWMLVTGICFISVTALVKFMGTGLPPAQMAFLRYLLGLVFLIPAI--- 58
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L+ P+ + F I + + YA+ + ++ P+
Sbjct: 59 ----GALRAAHLTPRQWKLFGFRGVIHGLGVISWFYAMTRIPLADVTAMNYLAPIYVTIG 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+VFL E+L +I A ++ ++ I+ + S A+ ++A F + +
Sbjct: 115 AAVFLGEKLAFRRIAAVVMALIGAFIILRPGFRDISSGHFAMLFTALAFGASYLTAKVTA 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V+A+ ++F + ++ + + L + A
Sbjct: 175 DEVKPSVVVAMLSIFVTIVLAPFALINWVTPTLWELFLLFCIACCAVAGHYTMTLAFAAA 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ + +T + ++ F + +D I +++ ++ + K
Sbjct: 235 PVTVTQPVTFTQLIWAVLLGYFAFGEAVDIWVVIGGVVILSSVTFITWREAVLKRK 290
>gi|86140047|ref|ZP_01058611.1| membrane protein, putative [Roseobacter sp. MED193]
gi|85823297|gb|EAQ43508.1| membrane protein, putative [Roseobacter sp. MED193]
Length = 306
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 100/293 (34%), Gaps = 8/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S ++G ++F + + ++L + E R L L + +
Sbjct: 10 TSKHPLIGVFWMFTTGLCFVAVTALVKYLGHRIPPAESAFLRYLLGLVFLIPML------ 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ PK + + + + +A+ + +++P+ ++
Sbjct: 64 -GSLRRASLTPKLWFLFASRGLVHSGGVILWFFAMTQIPLAEVTAMNYLSPIYVTLGAAM 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E+L +I A L+ ++ +I+ + IA+ ++A F + +
Sbjct: 123 FLGEKLAARRIAAVLVALIGAVIILRPGFREISPGHIAMMFTALAFGASYLLAKFTVDGT 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ V+A+ +++ + + + + + L + + A ++
Sbjct: 183 NPVVVVAMLSIWVTLGLAPFALAVWVTPTLEELVILFAVACFATAGHFTMTLAFAAAPVT 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + + + +P+D + G+++ A+ + +
Sbjct: 243 VTQPVTFLQLIWATLLGALVFSEPVDIWVVLGGGLILAAISFITWREAMLKRR 295
>gi|330973985|gb|EGH74051.1| hypothetical protein PSYAR_26214 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 295
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 85/293 (29%), Gaps = 5/293 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + G F+ A L+ +++L + ++ + ++
Sbjct: 6 TPSSGVNQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVW-----ARYLVHTLLMA 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K G+ V A L F +L+ + F P++ L
Sbjct: 61 CIFMPSAGLRVLRTKRPGLQVLRALALLGTSLLFTSSLMFIPQAEATAVNFFAPLLVTAL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L ER+ Q IA ++ + ++I+ G + SA CFA +
Sbjct: 121 SVPLLHERVTRGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVS 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F LF + + + + FL+ G + + + A
Sbjct: 181 PFDSPTTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFA 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + Y + + + I+ ++ +
Sbjct: 241 APAMLAPFSYCQIVFAGLLGYLVFDHTPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|212224927|ref|YP_002308163.1| permease [Thermococcus onnurineus NA1]
gi|212009884|gb|ACJ17266.1| permease [Thermococcus onnurineus NA1]
Length = 283
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/283 (18%), Positives = 100/283 (35%), Gaps = 4/283 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M G L + + ++WG ++ +F +S L V RV + F L +
Sbjct: 1 MNGRLKIIVSMLIWGSVGIFARF-SNLSGLGVAFFRVSLGAL-LLFLTFGTGKMAWLREV 58
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ L+ LA++W F A Y++ PVI+ + FL ERL
Sbjct: 59 KRSLKEKTKPLIALGVALALNWVFLFTAFNYTTIAKAVLVYYLAPVIATIISWRFLGERL 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF--IEMC 201
+ L L LL++ + A A + + F +E
Sbjct: 119 TPKRWALIGLAFLGLLLIMSGEKLNFNDRDFLGVIFALTAAFFYALIPNLGRFLRDVEGS 178
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL L +G+ +I + + ++ G+K +++ V I
Sbjct: 179 VLTFLQLAIASLVLAPFMVVSGIGDPVWWAIIILVVIHTALALFLYMDGLKDVEVNEVAI 238
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ Y P+ +V + I + + I ++++A ++ +
Sbjct: 239 LSYLDPMSAVVYAFLIFGEVPELRTVIGGALILLASMLDVWAR 281
>gi|306833630|ref|ZP_07466757.1| DMT superfamily drug/metabolite transporter RarD [Streptococcus
bovis ATCC 700338]
gi|304424400|gb|EFM27539.1| DMT superfamily drug/metabolite transporter RarD [Streptococcus
bovis ATCC 700338]
Length = 295
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 69/297 (23%), Positives = 145/297 (48%), Gaps = 7/297 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS---GG 77
T +G LF YILWG LY + L V+ S+R+++++ + +V
Sbjct: 2 KKTNLGILFGLITYILWGFLSLYWKLLSGVNSYNTFSYRIIFTVLTMLVYMVLSKNKERY 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + + + + M V ++ ++A++W +I+A+ +Q SF Y++ P++S+ L V
Sbjct: 62 RGEIRQLISHKQELAMAVLASFLIALNWLTYIFAVSHQQATQASFGYYIMPLVSILLALV 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL+ A ++ + + I+ +++G PL+S+ +AVT++ Y +K + + S
Sbjct: 122 FLHERLSPWMTAAIIIAGIGVGILAINTGQPPLVSILLAVTFALYGLVKKNVKLSSDVAM 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E V+A L Y+++ + L L +F+ +KRA L
Sbjct: 182 LVESSVVAPFVLIYLLFFSKETLLDYSLLENVLLLASGIVTA---IPLLLFAEAVKRAPL 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ +G ++Y P + + +VF+ + + F + IA+ +++L +++ K
Sbjct: 239 NIIGFIQYINPTIQLAIAVFVFHEKVGNGEVSGFIFIWIAIAIFILGQLMSLRKKSR 295
>gi|50085642|ref|YP_047152.1| chloramphenicol-sensitive protein [Acinetobacter sp. ADP1]
gi|49531618|emb|CAG69330.1| chloramphenicol-sensitive protein [Acinetobacter sp. ADP1]
Length = 310
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 6/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G A + +G+ YTQ L + R++ +LP + + +L
Sbjct: 3 QGVCLSVLASVTFGVLYFYTQLLTGFGSEQTFGWRMISTLPFLTLLMWMIGDLHYIKQVL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
KNP + +L+ S+ ++++ F++A + +G S YF+ P++ V +GS+F KE
Sbjct: 63 TQIKKNPWFIWLLIVSSVLVSLQLWLFLWAPMNGRGLEVSLGYFLLPLVLVLIGSLFYKE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+L+ Q IA LL IL + G A+ + F + G F
Sbjct: 123 KLSRFQQIAVLLAILGVAHEIWQQGTIAWETALVAVGYSAYFFLRKKMKTDHLGGFWWDI 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ +P FY V+ + + L + L G G L++ + + + G+
Sbjct: 183 VIILPIAFYFVFMPTDISQPWPLSCLVW--ILAGLGFLSALGLGSYILASRFLPMVLFGL 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ + S +L + I + + + + +A+++ ++ I+ + K K
Sbjct: 241 LSYLEPILLALVS-LMLGEKISSQEWLTYIPIWVAVLLLVIEGAIHLYQQKQK 292
>gi|88800170|ref|ZP_01115739.1| hypothetical protein MED297_09461 [Reinekea sp. MED297]
gi|88777151|gb|EAR08357.1| hypothetical protein MED297_09461 [Reinekea sp. MED297]
Length = 303
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 83/285 (29%), Gaps = 4/285 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T+ L + A ++WG + + +F + ++ + V+ R+ + G
Sbjct: 1 MDQATLRAHLALVLAMVIWGSSFIALKFAVTEIPPMIVVFLRMAVGSVSFLVVWPWLRHG 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K K + + L + + V +FLG
Sbjct: 61 FVYQKGDWKYLVGMALFEPCLYFLFEAQALQYTSAGQAGMVTSILPIMVAATAFIFLGER 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP---LLSLAIAVTWSAYCFARKTIPVGSSE 194
+ I ++ +++ L A + +
Sbjct: 121 NSLRQWTGFFIAVTGVVWMTVTSEVSDQAPNALLGNFLEFMAMSMAVGYTLLVKHLTKRY 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F+ + + + + + L + ++ + +++Y +
Sbjct: 181 SAFLLTALQSFVGALFFLPLSLASEWPAHLSMPVIGAIVYLGLVVTIGGYGLYNYSMHHV 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
ST P++ ++ SV +L + + ++ + +V + +
Sbjct: 241 TASTAAGYTNLIPVVSLMFSVLLLGERLVLMQWLAVVLVFAGVFL 285
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 40/131 (30%), Gaps = 1/131 (0%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+A+ F V + +A+ ++ ++V + + +
Sbjct: 14 LAMVIWGSSFIALKFAVTEIPPMIVVFLRMAVGSVSFLVVWPWLRHGFVYQ-KGDWKYLV 72
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F + ++ G++ P+++ ++ L + + F I
Sbjct: 73 GMALFEPCLYFLFEAQALQYTSAGQAGMVTSILPIMVAATAFIFLGERNSLRQWTGFFIA 132
Query: 294 VIAMVVYLLPT 304
V +V + +
Sbjct: 133 VTGVVWMTVTS 143
>gi|21282420|ref|NP_645508.1| hypothetical protein MW0691 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485601|ref|YP_042822.1| hypothetical protein SAS0694 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651566|ref|YP_185664.1| integral membrane domain-containing protein [Staphylococcus aureus
subsp. aureus COL]
gi|82750432|ref|YP_416173.1| hypothetical protein SAB0679c [Staphylococcus aureus RF122]
gi|87160042|ref|YP_493417.1| integral membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|151220910|ref|YP_001331732.1| hypothetical protein NWMN_0698 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161508994|ref|YP_001574653.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221141147|ref|ZP_03565640.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|253731354|ref|ZP_04865519.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|258423378|ref|ZP_05686269.1| integral membrane domain-containing protein [Staphylococcus aureus
A9635]
gi|258452937|ref|ZP_05700931.1| integral membrane protein [Staphylococcus aureus A5948]
gi|262052336|ref|ZP_06024539.1| hypothetical protein SA930_1062 [Staphylococcus aureus 930918-3]
gi|282916070|ref|ZP_06323833.1| hypothetical protein SATG_01594 [Staphylococcus aureus subsp.
aureus D139]
gi|283769892|ref|ZP_06342784.1| integral membrane protein [Staphylococcus aureus subsp. aureus H19]
gi|284023750|ref|ZP_06378148.1| integral membrane protein [Staphylococcus aureus subsp. aureus 132]
gi|294849399|ref|ZP_06790142.1| hypothetical protein SKAG_01482 [Staphylococcus aureus A9754]
gi|297208545|ref|ZP_06924974.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912637|ref|ZP_07130080.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381654|ref|ZP_07364303.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|21203857|dbj|BAB94556.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244044|emb|CAG42470.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285752|gb|AAW37846.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus COL]
gi|82655963|emb|CAI80367.1| probable membrane protein [Staphylococcus aureus RF122]
gi|87126016|gb|ABD20530.1| Integral membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|150373710|dbj|BAF66970.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160367803|gb|ABX28774.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253724879|gb|EES93608.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|257846439|gb|EEV70462.1| integral membrane domain-containing protein [Staphylococcus aureus
A9635]
gi|257859448|gb|EEV82302.1| integral membrane protein [Staphylococcus aureus A5948]
gi|259159776|gb|EEW44817.1| hypothetical protein SA930_1062 [Staphylococcus aureus 930918-3]
gi|269940306|emb|CBI48683.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282320018|gb|EFB50365.1| hypothetical protein SATG_01594 [Staphylococcus aureus subsp.
aureus D139]
gi|283460039|gb|EFC07129.1| integral membrane protein [Staphylococcus aureus subsp. aureus H19]
gi|294823931|gb|EFG40357.1| hypothetical protein SKAG_01482 [Staphylococcus aureus A9754]
gi|296886800|gb|EFH25704.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|298694059|gb|ADI97281.1| hypothetical protein SAOV_0764c [Staphylococcus aureus subsp.
aureus ED133]
gi|300886883|gb|EFK82085.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|302332439|gb|ADL22632.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750626|gb|ADL64803.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304339757|gb|EFM05702.1| integral membrane domain protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315196400|gb|EFU26751.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus CGS01]
gi|320139940|gb|EFW31801.1| integral membrane protein DUF6 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320141971|gb|EFW33799.1| integral membrane protein DUF6 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438922|gb|EGA96657.1| integral membrane protein [Staphylococcus aureus O11]
gi|323441870|gb|EGA99510.1| integral membrane protein [Staphylococcus aureus O46]
gi|329313450|gb|AEB87863.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus T0131]
gi|329728527|gb|EGG64960.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21189]
Length = 288
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 102/293 (34%), Gaps = 6/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L VFL
Sbjct: 56 HQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + + L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I Y + + + + + D T+ + +++ A ++ K
Sbjct: 236 IFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK 288
>gi|160889143|ref|ZP_02070146.1| hypothetical protein BACUNI_01564 [Bacteroides uniformis ATCC 8492]
gi|317480674|ref|ZP_07939761.1| integral membrane protein DUF6 [Bacteroides sp. 4_1_36]
gi|156861150|gb|EDO54581.1| hypothetical protein BACUNI_01564 [Bacteroides uniformis ATCC 8492]
gi|316903181|gb|EFV25048.1| integral membrane protein DUF6 [Bacteroides sp. 4_1_36]
Length = 298
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 85/294 (28%), Gaps = 5/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ G ++ + +G+ P +T L S EV+++R + + +
Sbjct: 1 MQNVSIKGFIYAALSSATFGLAPFFTISLLLAGFSSFEVLAYRWGIASLALVVFGIMLGE 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L + + V I + + ++ F
Sbjct: 61 TFRISRKDWGTVFILSLLRAATSFSLVIAYQNIASGVASTIHFMYPLAVALAMMGFFGEK 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS---S 193
L ++ ++ S I + +A ++ Y +
Sbjct: 121 RSFAILFAVLVSLSGAGLLSSGKIDFEGGNTTIGLIAAGLSVFFYGGYIVGVRKSRAVQI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V+ + ALF+++ +GG L + IK
Sbjct: 181 PSTALTCYVMGLGALFFIIGGYLTGGIRLANDTHTWLNILGLALPATAISNITLVKAIKY 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I PL +V I + I +++ A+ V ++
Sbjct: 241 IGPTLTSIFGALEPLTAVVIGCLIFNESFTPASAIGMALIITAVTVVVVHEKKK 294
>gi|66045368|ref|YP_235209.1| hypothetical protein Psyr_2128 [Pseudomonas syringae pv. syringae
B728a]
gi|63256075|gb|AAY37171.1| Protein of unknown function DUF6 [Pseudomonas syringae pv. syringae
B728a]
Length = 295
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 86/293 (29%), Gaps = 5/293 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + G F+ A L+ +++L + ++ + ++
Sbjct: 6 TPSSGVNQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVW-----ARYLVHTLLMA 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K G+ V A L F +L+ + F+ P++ L
Sbjct: 61 CIFMPSAGLRVLRTKRPGLQVLRALALLGTSLLFTSSLMFIPQAEATAVNFLAPLLVTAL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L ER+ Q IA ++ + ++I+ G + SA CFA +
Sbjct: 121 SVPLLHERVTRGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVS 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F LF + + + + FL+ G + + + A
Sbjct: 181 PFDSPTTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFA 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + Y + + + I+ ++ +
Sbjct: 241 APAMLAPFSYCQIVFAGLLGYLVFDHTPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|298484350|ref|ZP_07002511.1| membrane protein [Bacteroides sp. D22]
gi|298269504|gb|EFI11104.1| membrane protein [Bacteroides sp. D22]
Length = 295
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 86/294 (29%), Gaps = 5/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+S+R + +
Sbjct: 1 MNRIKGILYAAVSSSTFGLAPFFSLTLLLAGFSAFEVLSYRWGVATIALTLFGWCSGCSF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K + +L + + I + ++ F
Sbjct: 61 RLEKKDFLVVLLLSLLRAVTSFSLLIAYQNIATGVASTIHFMYPLAVSLVMMYFFQEKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEG 195
L + ++ S + + + +A +++ Y +
Sbjct: 121 LWVMFAVFMSLLGAALLSSGELEAKNGDTIVGLVAACVSVFSYAGYIVGVRMTRAVRINS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V+ + + Y + + G + L + IK A
Sbjct: 181 TVLTCYVMGLGTVLYFIGALTTSGLQLVADGYTWLIILGLALPATAISNITLVRAIKYAG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL +V VF+ K+ I ++++A+ V + N
Sbjct: 241 PTLTSILGAMEPLTAVVIGVFVFKELFTLNSAIGIILILLAVSVVIFRKQKNER 294
>gi|257470061|ref|ZP_05634153.1| hypothetical protein FulcA4_12018 [Fusobacterium ulcerans ATCC
49185]
gi|317064285|ref|ZP_07928770.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689961|gb|EFS26796.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 300
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/306 (12%), Positives = 89/306 (29%), Gaps = 18/306 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G + ++WG T + T+ L + +E++ R +
Sbjct: 1 MNNKNTLGHISAILTVLIWGTTFISTKVLLTHFTPIEILFFRFTLGFVALLII----YPH 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L D + + + T+ + + + I
Sbjct: 57 RLILTDKKQEKLFMLAGLCGVTLYFLFENIALTYSFASNIGVIVSISPFITGILTHF--F 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----------WSAYCFARK 186
+E+L + L+ I + +++ + L I +S
Sbjct: 115 LKQEKLKLTFFLGFLVSITGVALISFNGSTVLKLNPIGDILAVLAAATWSVYSIVTKKIS 174
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + I L + + F G F + L ++ F
Sbjct: 175 DYQYNTIQATRRIFFYGLIFMLPGLFFFDFRLGAERFRDPLVLFNILFLGFGASAVCFVT 234
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ +K + + Y P++ + S ILK+ I + + + + + +
Sbjct: 235 WNLSLKLLGVLKTSVYIYAVPVITVAFSALILKEKITPIAMFGTFLTLAGLFISENRLTL 294
Query: 307 NSGKNK 312
KNK
Sbjct: 295 KKEKNK 300
>gi|332559459|ref|ZP_08413781.1| hypothetical protein RSWS8N_10390 [Rhodobacter sphaeroides WS8N]
gi|332277171|gb|EGJ22486.1| hypothetical protein RSWS8N_10390 [Rhodobacter sphaeroides WS8N]
Length = 306
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 98/304 (32%), Gaps = 14/304 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + +++ + + V E + R +++P +F + + +
Sbjct: 1 MHPLRGIGLKVASVLIFIVMSALIKATSDRVPAGEAVFFRSFFAMPVIFVWLAWRHELRT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK V+ + + G L + + P+++V ++FL
Sbjct: 61 GLKAV-----NPMGHVWRGVVGTMAMGLGFAGLAYLPLPEVTALGYAAPLLTVIFAAMFL 115
Query: 140 KERLNHLQIIAALLIILSL--------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + +I A L ++ + +++ G A V A + +
Sbjct: 116 GEEVRAFRISAVALGLVGVLIVLSPRLTVLSGGMGHREAFGAALVVGGAVFAGLAQVFIR 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ +L + + + + + LIG G+L + +
Sbjct: 176 KLVHTEATSAIVFYFSLTATLLSFVTLPFGWVWPTPAEAALLIGAGVLGGVAQILLTSAY 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ A S V EY + + ++ + V +VV A ++ + +
Sbjct: 236 RFADASLVAPFEYASMIFALLIGYLAFDEVPTLVMLGGASLVVAAGILIIWRERRLGLER 295
Query: 312 KTKK 315
++
Sbjct: 296 ARQR 299
>gi|223939853|ref|ZP_03631722.1| protein of unknown function DUF6 transmembrane [bacterium Ellin514]
gi|223891445|gb|EEF57937.1| protein of unknown function DUF6 transmembrane [bacterium Ellin514]
Length = 299
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 91/296 (30%), Gaps = 3/296 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ +G + A +L G T L+ ++L VS + + + R ++ + I + L
Sbjct: 1 MNKRLGLFQIHGAAVLAGFTGLFGKWL-DVSPVIITAGRTVFGSVALLITIRLMGSTVRL 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +A L + + +SF FVT + L
Sbjct: 60 NSRKELLALMISGGLLAAHWLTFFKSIQVSTVAVGVLAFSSFPIFVT--LLEPLAFKERF 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ ++ + + + ++ + + + S
Sbjct: 118 QFVDLITAAVVVAGLALVVPVLDLRNNITQGVLWGILSGLTYALLSLFSRSSIRTIPALT 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ F+ H + L L+ + + + + ++ + T
Sbjct: 178 VAFYQQLFVVLLTLPFAFASHEKITINSFWLLLLLGLVFTALLQSLLVASLRHIRAQTAS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
I+ P+ +V + +L + I ++ A+ +L + + KS
Sbjct: 238 IVISLEPVYSVVLATVLLHEIPTARTLIGGVLICGAVFAAMLQHMKAKAQGAELKS 293
>gi|323465096|gb|ADX77249.1| putative permease [Staphylococcus pseudintermedius ED99]
Length = 293
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 99/295 (33%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L + + I + ++ + + V + R ++ F I+ +
Sbjct: 2 NTKVKGILAILISAIGFSFMAVFFRLSGDLPVFQKSLARNFVAMFIPLFFILKYKQPF-- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +LV + + + IYA+ + P ++ L +FLK
Sbjct: 60 ----FGKLSSQPLLVTRSVLGLMGVLLNIYAIDHMVLSDADILMKLNPFWTILLSLIFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + QI + ++ I+ +L + + AI S A V +
Sbjct: 116 EFIQKYQITSMVIAIIGMLFVVKPEFSSDVIPAIVGLLSGVFAASAYTAVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + F V+ F ++ ++LI GL + + A +
Sbjct: 176 TIVFYFSFFSVIVLIPFVAFTFEPMSLIQIVYLILAGLSAAVGQIGITVAYSYAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I Y + + + + + D I + I++ A Y+ S +K ++
Sbjct: 236 IFTYASIIFTAIIGFILFNESPDFYAIIGYIIILSASY-YMFEKARRSTSSKHRQ 289
>gi|115358933|ref|YP_776071.1| hypothetical protein Bamb_4184 [Burkholderia ambifaria AMMD]
gi|115284221|gb|ABI89737.1| protein of unknown function DUF6, transmembrane [Burkholderia
ambifaria AMMD]
Length = 319
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 84/290 (28%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P + +
Sbjct: 2 KTRLIGYLYLAAAMAGVGSTVIASRLAAGGLPPFAATALRFLIATPLLCALMRAQRMRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ AV ++V +A + I P +S + ++ L
Sbjct: 62 RICA----RDAVLLVVQAAAGGVGYTVLLISGTKLSSPIDAGVMLGTLPAMSTLIAALVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
+ER AA L +L +T G + SL AV A
Sbjct: 118 RERQTPRDWGAAALATAGVLFVTFAPGQAMPSLRTLAGDALVLAAVACEAVFILLNRRLS 177
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L V + + + +
Sbjct: 178 TPLPPLALSTAMSGLGFMLALVPAAFEWHALAAGWTTSAISAIAYYALVPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + R + +VV M+V
Sbjct: 238 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLGGTRLLGIALVVTGMLV 287
>gi|157165095|ref|YP_001466018.1| phosphate acetyltransferase (phosphotransacetylase) [Campylobacter
concisus 13826]
gi|112801239|gb|EAT98583.1| transporter [Campylobacter concisus 13826]
Length = 300
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 91/290 (31%), Gaps = 10/290 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G L +LWG + + Q+L + +S ++ +R+L + + F
Sbjct: 2 SSHQLGVLLTLVGGVLWGFSGVCGQYLFLQGISADFLVPYRLLLAGA-LIVLYYAFKAKK 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + +++ L + + Y++ + + + PV+ + + +
Sbjct: 61 AVFAPVTDVKLMAELFIYALLGLMMTQYAYFYSIELSNAAVATVIQYTAPVLILAIICLK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ L+I+A L +L + + H+ L + + +
Sbjct: 121 ERRAPRPLEILALLCAMLGVFFLATHAQISALVISPEALFWCLVSAVCVCVYNLAPARLN 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + + + G FL L F F + G+
Sbjct: 181 AKYSVTLTLGWGMVIGGVVLCLYMRVWEFAGLSGTAQWLAFLAVITLGTIFAFSFYMTGV 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
K S ++ PL F L + F +++ + +
Sbjct: 241 KLIGASKASMIACIEPLSAAFFGYFWLGTKFVFWDFLGFVLIISCIFLLS 290
>gi|239636657|ref|ZP_04677659.1| integral membrane domain protein [Staphylococcus warneri L37603]
gi|239598012|gb|EEQ80507.1| integral membrane domain protein [Staphylococcus warneri L37603]
Length = 289
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 99/293 (33%), Gaps = 6/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I
Sbjct: 2 NPKIKGIIAILISAIGFSFMSVFFRLSGDLPVFQKSLARNLVAMFIPLFFIF------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYAL + P ++ L +FL
Sbjct: 56 KQPMFGKLSSQPLLISRSTLGLIGVLLNIYALDHMVLSDADTLMKLNPFWTILLCFIFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ A+ S A V +
Sbjct: 116 EKVRKYQISAMIVAILGMLLIVKPEFSSSFIPALIGLLSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ F + L+L G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFSIFTFEPMSKLQLLYLFGAGLSAAVGQIGITLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I Y + + + + + D + TI + +++ A S + +
Sbjct: 236 IFTYASIIFTAIFGFILFGETPDLLSTIGYVVIISASYYMFEKARRESNQQQQ 288
>gi|27382166|ref|NP_773695.1| transport protein [Bradyrhizobium japonicum USDA 110]
gi|27355336|dbj|BAC52320.1| hypothetical transport protein [Bradyrhizobium japonicum USDA 110]
Length = 310
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 73/284 (25%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + + + R WS + +
Sbjct: 23 YLLLSITALCWAGNAIVGRLAAGHIPPVTLSFLR--WSFAFLLVLPFAWKHLAQDWPAIR 80
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + + +AL Q T P++ L RL
Sbjct: 81 GKLGLMVTLSITG--IGAFNTLQYWALEHTQALNTLLLQSAAPLLVALWSLAILGIRLTA 138
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q LL + +L + LH L+ L + ++ Y P
Sbjct: 139 AQAFGVLLSMCGVLTILLHGDFTTLSNIEFNKGDLIFLLALLIFALYSVLSLKRPAMHGL 198
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F L + S ++ + F+ G++
Sbjct: 199 SFLAFTFGAGAACLIPLEIWELSARPVMKFDAPNLLTLFYVAVFPSTLAYLCFNRGVRLI 258
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + P+ + ++ L + I F +V+ +
Sbjct: 259 GANRAAPFFHVVPVFGSIMAMVFLGERPQAFHFIGFALVLSGVF 302
>gi|329957575|ref|ZP_08298050.1| putative membrane protein [Bacteroides clarus YIT 12056]
gi|328522452|gb|EGF49561.1| putative membrane protein [Bacteroides clarus YIT 12056]
Length = 303
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 100/299 (33%), Gaps = 18/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G LF A ILWG+ + L + S L V + R++ + + ++
Sbjct: 2 NKNIQGHLFALTANILWGLMAPIGKSALVEFSALSVTTFRMVGAAACFWLLSLFCKREQV 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+D LK + S L + G +I+ L S P++++ + +V+L
Sbjct: 62 DHRDMLK------IFFASLFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTMIVAAVYL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTI 188
KE + + +++ + + LI+ + S G L +A +
Sbjct: 116 KEPVTNKKVLGIFVGAMGALILIMSSQNASSGNGSIIGDLLCLVAQISFSIYLTVFKGLS 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S M V A ++ + + + + F +
Sbjct: 176 QKYSPITLNKWMFVYASMCYIPFSYHDVAAIQWTEISTAALLQVGYVVVGGSFFAYICIM 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ + +V I + + I +V + + +
Sbjct: 236 TAQRLLRPTVVSMYNYMQPIVASIVTVIIGMAVFNLEKGIAIALVFLGVYIVTQSKSRK 294
>gi|298504692|gb|ADI83415.1| membrane protein, putative [Geobacter sulfurreducens KN400]
Length = 308
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 94/305 (30%), Gaps = 14/305 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV---SVLEVISHRVLWSLPGVFFAI 71
+ A + G + + +LWG + T+ L + + L + R+ ++P + A
Sbjct: 3 TASRAHADSRHGLFLILFSAMLWGTVGITTKALYGLADTTPLSIGFFRLALAVPVLVAAC 62
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+G M+V A +F T + PVI
Sbjct: 63 RLATGPAMFRVA---RRDLGTMIVVGAMTALYQVCYFAAIRQIGVAAATLVTLCTAPVIV 119
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCF 183
L ++ ER + +++ + ++ + ++ A+ +S
Sbjct: 120 ALLSAILTGERPSGRVLLSLACALAGTALLVGLRPLAGEGGNIPLGIAQALGSAFSYAAV 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + + +++ + G L L + +
Sbjct: 180 TVASRTLAGRYHPLQPVAIGFAAGALFLLPTALADGLVLTYPAAGWVLLLYLGVVPTALA 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +F G++ + I PL+ V + I + + + + ++ A+ + P
Sbjct: 240 YALFLAGMRTTTATAASICTLLEPLVSTVLAWLIFGERLGPLGAVGAVLLFGAIGLLARP 299
Query: 304 TVINS 308
Sbjct: 300 VRRRQ 304
>gi|237740092|ref|ZP_04570573.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229422109|gb|EEO37156.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
Length = 286
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 94/283 (33%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R SL F +
Sbjct: 3 SNKTKGVFWMLVSVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSLMLSAFILF------KE 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + YAL + ++PV +FLK
Sbjct: 57 KESIKVEKANIPFVFGRSFFGFIGMVANFYALEHLTMAEANMLNKLSPVFVTICACIFLK 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ Q+I +L++L+++ + S P + ++A +SA + G
Sbjct: 117 ERVDKKQVIGIILMLLAVVFVIKPSFSPEVIPSLAGLFSAVLAGFSYTIIRYLNGKVKSE 176
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L V + L G G+ + +Y A S V
Sbjct: 177 INVFYFSLLSVVCTFPLMMMNFVKPTLDEFLILLGGIGISAAMGQFGLTYAYTFAPASEV 236
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYL 301
I Y + ++ + D I +++ A+ +Y+
Sbjct: 237 SIYNYVIIITSMLMDYVLFSTIPDLFSFIGGFMIMTTAIYLYI 279
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 33/76 (43%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
F+ G Y ++ ++ ++ +P+ + + + LK+ +D + I
Sbjct: 67 IPFVFGRSFFGFIGMVANFYALEHLTMAEANMLNKLSPVFVTICACIFLKERVDKKQVIG 126
Query: 290 FGIVVIAMVVYLLPTV 305
++++A+V + P+
Sbjct: 127 IILMLLAVVFVIKPSF 142
>gi|329902041|ref|ZP_08273011.1| transporter of the DMT superfamily [Oxalobacteraceae bacterium
IMCC9480]
gi|327548889|gb|EGF33514.1| transporter of the DMT superfamily [Oxalobacteraceae bacterium
IMCC9480]
Length = 302
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 95/296 (32%), Gaps = 15/296 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF 74
A ++G IL+ + + + V + +I+ R+L+SLP ++
Sbjct: 7 SAARKTFLIGLAIAVTGAILFSTKAIVAKLIYRYNVDAVTLIAFRMLFSLPFFLVIALWK 66
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + + ++V + L L F+TP + +
Sbjct: 67 MRTEPSLSNAERGR----IVVLGLLGYYLSSFLDFLGLQYISAGLERLILFLTPSFVLLI 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFAR 185
++FLK+++ L+ A L+ + +L++ +H + + AV++S Y A
Sbjct: 123 SALFLKKKITPLEWGALLISYVGMLLVFVHDARTGGANVLLGASLVLGAAVSYSLYLLAS 182
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + A + L L
Sbjct: 183 GEMVRRVGVLRLVSYAMCVSSAACIGQFFLLRPAGMLVQPMEVYWLSLFNAFFCTVLPVL 242
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + + R T P+ + IL +PI + G+V+ + +
Sbjct: 243 MTMFAVARIGAGTASQAGMVGPVSTLFLGAMILDEPITGFQLAGTGLVLAGIYLLS 298
>gi|327440022|dbj|BAK16387.1| permease of the drug/metabolite transporter superfamily
[Solibacillus silvestris StLB046]
Length = 315
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 95/300 (31%), Gaps = 10/300 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSG 76
M+G L V WGI Q L + V ++S R++ + + A F
Sbjct: 1 MKNKRMIGFLLVVSGSFFWGIGGTMAQQLFSLGIEVSWLVSTRLVIAGILLLIAQAIFKD 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ K + A +LVF+ + ++ ++ + + ++ PV+ + +
Sbjct: 61 QGQIFKIWRERRDAFRLLVFAIVGMLGVQYTYMASIKEGNAAVATLLQYLAPVMIIIWVT 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKTI 188
V + + +L + + + + ++ + A+
Sbjct: 121 VRGLSKFTKKDAVTIVLALSGSFFLLTNGSLSAFAVPLPAILWGLLSGVTLAFYTLYVIP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + L + L +I F +
Sbjct: 181 LLKRFDSLVVVGWAMLLAGLTISFVQPPWDVDVSVLTGATLVYLVIVIIFGTMLAFWFYI 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ ++ PL ++++V LK+P + + ++++ M+ L
Sbjct: 241 ESLQTLTAKETSLLGNIEPLTAVLATVLWLKEPFGGFQWLGTSLILVMMIYIALKADRQK 300
>gi|306831521|ref|ZP_07464679.1| DMT superfamily drug/metabolite transporter RarD [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|304426306|gb|EFM29420.1| DMT superfamily drug/metabolite transporter RarD [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
Length = 302
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 68/297 (22%), Positives = 144/297 (48%), Gaps = 7/297 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS---GG 77
T +G L YILWG LY + L V+ S+R+++++ + +V
Sbjct: 9 KKTNLGILLGLITYILWGFLSLYWKLLSGVNSYNTFSYRIIFTVLTMLVYMVLSKNKERY 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + + + + M V ++ ++A++W +I+A+ +Q SF Y++ P++S+ L V
Sbjct: 69 RGEIRQLISHKQELAMAVLASFLIALNWLTYIFAVSHQQATQASFGYYIMPLVSILLALV 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL+ A ++ + + I+ +++G PL+S+ +AVT++ Y +K + + S
Sbjct: 129 FLHERLSPWMTAAIIIAGIGVGILAINTGQVPLVSILLAVTFALYGLVKKNVKLSSDVAM 188
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E V+A L Y+++ + L L +F+ +KRA L
Sbjct: 189 LVESSVVAPFVLIYLLFFSKESLLDYSLLENVLLLVSGIVTA---IPLLLFAEAVKRAPL 245
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ +G ++Y P + + +VF+ + + F + IA+ +++L +++ K
Sbjct: 246 NIIGFIQYINPTIQLAIAVFVFHEKVGNGEVSGFIFIWIAIAIFILGQLMSLRKKSR 302
>gi|139438032|ref|ZP_01771585.1| Hypothetical protein COLAER_00572 [Collinsella aerofaciens ATCC
25986]
gi|133776229|gb|EBA40049.1| Hypothetical protein COLAER_00572 [Collinsella aerofaciens ATCC
25986]
Length = 303
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 14/301 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G A +L+G + + + +++ R + +
Sbjct: 4 GLFTYLAALLLFGSNGIIAAAIA-LPSSDIVLLRTFLGALSLVTILAITQRHKLQAPSRP 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ A+ + + + A T ++S Y+ P+I + L + E+L
Sbjct: 63 REAAALLLSGAALGASWIF---LFRAYQTIGVGVSSLLYYCGPIIVMALSPLIFGEKLTG 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLS-----LAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+I + + ++ + IA + + EG
Sbjct: 120 GKITGFIAVACGAFLIAAQGLGGNMPIAGIVCGIASAFCYALMVIASKGAPHIEGLENST 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNI-----PDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + +V + FL + + ++ + +
Sbjct: 180 LQVSAAFVTALVLTLITQSAPSFLSTGVAASIDWRAVAMLGIVNTGIGCLLYFSAVAKLP 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ TV ++ Y PL +V S +L + I VR + +++ + L S K +
Sbjct: 240 VQTVAVVGYLEPLSAVVFSAVLLGEAITPVRLMGAALIIGGAIFCELAGKRASAKAGIAQ 299
Query: 316 S 316
+
Sbjct: 300 T 300
>gi|78224170|ref|YP_385917.1| hypothetical protein Gmet_2977 [Geobacter metallireducens GS-15]
gi|78195425|gb|ABB33192.1| protein of unknown function DUF6, transmembrane [Geobacter
metallireducens GS-15]
Length = 309
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 96/304 (31%), Gaps = 13/304 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
++E+A +P T + +LWG + L+ + + ++ ++ R + + +
Sbjct: 4 TRESAPMPQGKVTAILVFTTVLWGGSFLFNKIGMREIPPIQFFFFRFALAALLMGIICI- 62
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + N V LA F+ + + + +
Sbjct: 63 -------PRLSRLNRDIVRRGAMVGVALAAVNLTFVLGVSGTTISRAGYLNNLFVLFIPL 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + +ERL+ + L + L + + T A A I V
Sbjct: 116 ISFLIWRERLDRITFAGVFLAVAGLWELASGGAEGFNRGDLLSTVCAVFIAIHIITVSRV 175
Query: 194 EG----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + AL F +G F + +
Sbjct: 176 LRDEDVYLVTFVQFSTVALAGAAITLAMPWPAFTIGAAGGWSLAYCAIFPTVICFTLQNA 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + G++ P+ +++ VFIL + + + ++++A+ LL +
Sbjct: 236 FQRFTTPTKAGLIYTLDPVWSMLAGVFILGERLTPRELVGCMLILVAVAGPLLGRLYLEQ 295
Query: 310 KNKT 313
+++
Sbjct: 296 RHRR 299
>gi|330898118|gb|EGH29537.1| hypothetical protein PSYJA_11385 [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 295
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 78/288 (27%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLS 79
+ G F+ A L+ +++L + ++ R L + + SG
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYLVHTLLMACIFMPSSGLRV 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + ++L FI + + L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATAVNFLAPL------LVTALSVPLL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ Q A ++ + ++I+ G + SA CFA + F
Sbjct: 126 HERVTRGQWTAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSP 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + + + + FL+ G + + + A + +
Sbjct: 186 TTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAML 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 246 APFSYCQIVFAGLLGYLVFDHTPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|296119643|ref|ZP_06838201.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306]
gi|295967526|gb|EFG80793.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306]
Length = 321
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 93/307 (30%), Gaps = 15/307 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S T++G L V A LWG T F V L + + + +
Sbjct: 3 SQGTLLGILAVLGAAALWGTTGTAATFAPDVGPLAMGAAALGIGGILQALIALPALYRAR 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
G + LA + + + S P+ S L V
Sbjct: 63 TELRAHLPVVFAGAVGVFIYPLAFYSSMHLAGVAVGTV----VSLGSAPIASEVLERVSE 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFARKTI 188
K L+ ++AA L I + L + S +A T A
Sbjct: 119 KRHLSRRWMLAAALGITGATTLCLSTMHNAPSQVAPTIAGIALGLVAGTTYALYSWSAHQ 178
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+G + G M + ++ + G T+ + + +F
Sbjct: 179 LIGRTIGRAAGMGAIFGLGGLALIPVLLATGAPLLSSTQSFTVGAYMALIPMFLGYLLFG 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
YG+ R S+ + P + + +V I+ + +D + + + A++V L
Sbjct: 239 YGLTRVNASSATTLTLAEPAIAAILAVVIVGERLDPLGWVGIAAIGAALLVLSLGPATGE 298
Query: 309 GKNKTKK 315
++ +
Sbjct: 299 SNRQSTR 305
>gi|333030227|ref|ZP_08458288.1| protein of unknown function DUF6 transmembrane [Bacteroides
coprosuis DSM 18011]
gi|332740824|gb|EGJ71306.1| protein of unknown function DUF6 transmembrane [Bacteroides
coprosuis DSM 18011]
Length = 306
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 102/291 (35%), Gaps = 4/291 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLY-TQFLEQVSVLE--VISHRVLWSLPGVFFAIVYFSGGLS 79
+ G ++ + +G+ PL+ +E + V E ++ +R S + ++ S L
Sbjct: 6 SFKGIIYAMISSGTFGLIPLFTIPLVEDLGVNEANILFYRFFLSAIMMGIICLFRSDSLK 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + A+G L + V+ +I + + ++ F
Sbjct: 66 IEKKQILPIFALGGLYALTALFLVYSYNYIASGVATTIHFLYPICVSLLMVLFFKEQKSK 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ L + + ++ ++++ L+ +T+ Y A + VG +
Sbjct: 126 SLIIAALLSLLGVALMCWTDGVSMNLLGVFLASLTILTYGTYIVALNQMKVGQLPADVLT 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNI-PDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+ A+ + V+ F GG + + + L +K A +
Sbjct: 186 FYVILAGAIIFFVYAQFDGGGVQAIPSFKAGVYLIALAFLATVISDFALILAVKYAGSTV 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ PL+ + + + + + I +++ ++V+ +L
Sbjct: 246 TAILGSMEPLVAVSVGILVFSEYFTSQSMIGLILILASVVLVILSDQRKKK 296
>gi|330508412|ref|YP_004384840.1| integral membrane protein [Methanosaeta concilii GP-6]
gi|328929220|gb|AEB69022.1| integral membrane protein (DUF6) [Methanosaeta concilii GP-6]
Length = 299
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 95/292 (32%), Gaps = 18/292 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ LF+ + WG + + T+ L Q+ + + R + + + +++
Sbjct: 4 QKEYQLAVLFIILDVLFWGFSFISTKVVLSQIPPVSIAFFRQIIAASTLIMLVLFTRTSF 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +++ S + +++ LL S P+ ++F ++
Sbjct: 64 KIGRRDMG-----YIVLASFFGIVMYFSLENTGLLYTTASNASMIVAALPIFTLFAEAML 118
Query: 139 LKERLNHLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFARK 186
+ ++ I+ + + + ++ + ++ I + R
Sbjct: 119 FRLKVTWKMILCLIFSTIGVALVVTVDGKVDLSSARFFGNLLVMGAIICWVFYTLLNRRL 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + V I + ++ + L + F +
Sbjct: 179 SENYPCLALTAAQSTVSIILFIPLIIPEIERWPAISEISLPVFANLLFLGVFCSGFAYIF 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ Y +R + V P++ +V IL + ++ + +++IA+
Sbjct: 239 YIYATRRLGATVVSAFLNLIPVVTVVFGYLILHDTLSWMQVLGMALIMIALY 290
>gi|251773485|gb|EES54033.1| conserved hypothetical protein [Leptospirillum ferrodiazotrophum]
Length = 313
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 89/297 (29%), Gaps = 10/297 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G V + + + + + E V V+ R+L LP +++F +L
Sbjct: 14 RLGVFLVLLSATGFAAKGILAKLAYAEGVGASTVLDMRMLSVLPVYLGGLLWFGRKGTLA 73
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L++P +++ LL L F+ P VFL + +
Sbjct: 74 RPGLRDPDFWKIVLLGLLGFDFSALLDFEGLLRIGAGLERLVLFLYPTFVVFLSGLLGRR 133
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ +++A+LL L I+ L + + + E +
Sbjct: 134 GIHLREVLASLLAYGGLAIVAGGKVTADPDLRTGMLLVLGSAIFYAVYLVGVERLVRRVD 193
Query: 202 VLAIPALFY--------VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L + +L + L + + GI
Sbjct: 194 PLYLTSLVMVVATAALLLQSFASGHFHPETADRTALLLIGAMGIFSTALPTFFMTVGISI 253
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S ++ + P++ + + L + + I +++ + S +
Sbjct: 254 IGSSRAALLSFFGPVVTLAMAGVFLGERVTFAEGIGALLIMGGVGWVAAEGKKGSFR 310
>gi|317127358|ref|YP_004093640.1| hypothetical protein Bcell_0627 [Bacillus cellulosilyticus DSM
2522]
gi|315472306|gb|ADU28909.1| protein of unknown function DUF6 transmembrane [Bacillus
cellulosilyticus DSM 2522]
Length = 306
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 97/303 (32%), Gaps = 17/303 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + I + L + + + + RV + + + + L K
Sbjct: 7 YILMILVVIFYSGNILIGKAINDLPPYTIAFFRVAIAFIVLLPIGLRSAMENRSLFWKYK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P +L+ + + + F +L + + PV++V L + LKE+L ++
Sbjct: 67 KP----LLIMTLSGVTFFNTFIYASLQFTTASNVAVLETIIPVVTVILSAYILKEKLRNI 122
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGSS 193
Q +L +L + + L I ++ + + + + +
Sbjct: 123 QTTGVILSVLGAIWVVLDGRIFQMTTMDWNIGDAIMIGAILTWSIYSIYVKQYMHLFPTY 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + I L V+ G + L + ++ +
Sbjct: 183 GVLCVMTGISVIVLLPVVLIEWSILGVPTIHVSNHMAGLLYLGIFPSFVALVFYNRAVAM 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S + P+ I+ + F L + I ++ + IV++ +++ T K
Sbjct: 243 LGASQASVFLNFLPVFTIIGAYFWLGETITWMQVVGACIVILGVLLTTQNTSKQQAIAKK 302
Query: 314 KKS 316
K+
Sbjct: 303 SKA 305
>gi|307254930|ref|ZP_07536751.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307259370|ref|ZP_07541097.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306862118|gb|EFM94091.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866606|gb|EFM98467.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 297
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 123/294 (41%), Gaps = 8/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLL 81
+G ++ A L+G L +S + R++ +LP +FFAI +
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRPLSGESLFGIRMVVTLPFLFFAIFVLKKQHEFFAFA 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + P + +++ ++ I+ F++A + + S Y + P++ V G + KE
Sbjct: 63 KHLKQQPHLILVILITSAIIGSQMWLFLWAPNSGKALEVSMGYLLMPIVMVAFGRLVYKE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ ++ +A + L + + GI + + V + Y R+T + + F E+
Sbjct: 123 SLSRVKWLAIIFATLGVLNSVIFAGGISWEGVFVFVGYPVYFHIRRTFQLSNIYSFIFEI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +L+++ + + + N + F+ +++ ++ + +G
Sbjct: 183 IFLIPISLYFIW---NTDMDFIYAQNPNISYFIAILSVVSGTALLSYTLASTILPFNMLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P M++ S I + +D + +VIA+ +L + + K + K
Sbjct: 240 LLGYLEPTFMMIISFLI-GERLDPNSYFLMMCLVIAVFFLILDGIFSIRKQRKK 292
>gi|159043266|ref|YP_001532060.1| hypothetical protein Dshi_0714 [Dinoroseobacter shibae DFL 12]
gi|157911026|gb|ABV92459.1| protein of unknown function DUF6 transmembrane [Dinoroseobacter
shibae DFL 12]
Length = 322
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 89/296 (30%), Gaps = 8/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++ + G L++ + + + + + + R + L + +
Sbjct: 22 AMTDSQSRPLAGMLWMVATGVSFVAVTALVKSIGSDIPAAQAAFLRYVLGLVFILPVLAS 81
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + + + I + +A+ + + +PV
Sbjct: 82 LLRTLP-------SRANLSIFALRGLIHTGAVIAWFFAMTQIPIAEVTAMNYFSPVYVTI 134
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++FL E+L +I A + +L LI+ L A+ +A FA +
Sbjct: 135 GAALFLGEKLAARRIAAICVALLGALIILRPGFRELSPGHFAMLGTALGFAISYLLAKRL 194
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
V+A ++F + + + + L G + + +
Sbjct: 195 VRDLSPGLVVAWLSIFVSIGLAPFAIAVWVTPSPWHLVVLFGVACFATLGHYTMTRAFQA 254
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +S + + + + + +D + G++V A+
Sbjct: 255 APMSVTQPVTFLQLVWATALGALVFGEAVDGFVVLGGGLIVAAISFLSWREARLRR 310
>gi|253581619|ref|ZP_04858844.1| integral membrane protein DUF6 [Fusobacterium varium ATCC 27725]
gi|251836689|gb|EES65224.1| integral membrane protein DUF6 [Fusobacterium varium ATCC 27725]
Length = 287
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/285 (17%), Positives = 101/285 (35%), Gaps = 9/285 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A L+GI+ L+ +F+ Q + ++ RV +S + I L L K
Sbjct: 8 LLQIHIAVFLFGISGLFAKFIVQ-PSIIIVLGRVFFSSIFLLLGICISKEDLKL-----K 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N K + ++ ILA+HW F + + ++ P+ F+ F E+L
Sbjct: 62 NKKDLIIIFIMGIILAIHWCTFFQGIKFSTVAIGLLTFSTFPIFITFMEPFFFCEKLKKE 121
Query: 147 QIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I A + + +L + + + + S + + + +
Sbjct: 122 DIFLAFMTFVGILFVIPSFQIKNEMTMGVIFGIISSFSYAVLSLLNKKYVKEYKGVIIAF 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V+ F + L L+ + +F +K K T GI+
Sbjct: 182 YEQFISFVILLPFFFIIKPVIAEKEILLLLLLGIVFTGIAHTLFINSLKNIKTQTAGIIS 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
PL I+ S+F L + + I++ + + + N
Sbjct: 242 SLEPLYGILLSIFFLNEIPSIKEIVGGIIILGTVFYSTMKNLKNK 286
>gi|327440266|dbj|BAK16631.1| permease of the drug/metabolite transporter superfamily
[Solibacillus silvestris StLB046]
Length = 290
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 100/296 (33%), Gaps = 13/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPL-YTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + ++WG + + LE +V ++++ R L + + F
Sbjct: 1 MQKYKGELLMLITAVMWGSGFVGMAKGLEHWTVFQLMAGRFLLASIILSFIFY------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K L + + IL + + L +F + +I + V
Sbjct: 54 -KKLKLISKAVIWKGAILGAILFIAFTLQTMGLEYTTPSKNAFLTAINVIIVPIIAYVIY 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEG 195
K R++ + IAA + ++ + ++L + + + A+ + V + +
Sbjct: 113 KRRIDRFEFIAAGVAVVGIGFLSLQDSMTINFGDFLSILCAVGFAFDIFYTNVFVKTEDA 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V+ G + + + + + + G++ A
Sbjct: 173 LALTIVQFYTATVLSVISVVMLGEVPTTYTSEGLGIIVYLAIFCTAVAYVCQNIGMQYAN 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ I+ T L + SV IL + + + ++ A++ + K+
Sbjct: 233 PTKSAIILSTESLFGTMFSVLILNEILTGRMLVGCVLIFFAILFAEVKPTFRRKKS 288
>gi|270296079|ref|ZP_06202279.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273483|gb|EFA19345.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 298
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 85/294 (28%), Gaps = 5/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ G ++ + +G+ P +T L S EV+++R + + +
Sbjct: 1 MQNVSIKGFIYAALSSATFGLAPFFTISLLLAGFSSFEVLAYRWGIASLTLVVFGIMLGE 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +L + + V I + + ++ F
Sbjct: 61 TFRISRKDWGTVFILSLLRAATSFSLVIAYQNISSGVASTIHFMYPLAVALAMMGFFGEK 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS---S 193
L ++ ++ S I + +A ++ Y +
Sbjct: 121 RSFAILFAVLVSLSGAGLLSSGKIDFEGGNTTIGLIAAGLSVFFYGGYIVGVRKSRAVQI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V+ + ALF+++ +GG L + IK
Sbjct: 181 PSTALTCYVMGLGALFFIIGGYLTGGIRLANDTYTWLNILGLALPATAISNITLVKAIKY 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I PL +V I + I +++ A+ V ++
Sbjct: 241 IGPTLTSIFGALEPLTAVVIGCLIFNESFTPASAIGMALIITAVTVVVVHEKKK 294
>gi|242242098|ref|ZP_04796543.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis W23144]
gi|242234411|gb|EES36723.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis W23144]
Length = 291
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 99/287 (34%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + + + ++ + + V + R ++ F I +
Sbjct: 4 NPKVKGIIAILISAVGFSFMSVFFRLAGDLPVFQKSLARNFVAMFIPLFFIYKYRQ---- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 60 --PMFGKLSSQPLLISRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTIVLSLIFLH 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + +IA S A V +
Sbjct: 118 EKVRKYQITAMIIAILGMLLIVKPEFSSSVIPSIAGLLSGIFAASAYTCVRALSTREKPY 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF VV + LFL+G GL + + A +
Sbjct: 178 TIVFYFSLFSVVVLIPFSIFTYTPMTTIQILFLLGAGLSAAVGQIGITLAYSFAPAKDIS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + + + + + D + T+ + +++ A Y+
Sbjct: 238 IFTYASIIFTALFGFILFGESPDMLATVGYIVIIGASY-YMFDKARR 283
>gi|229060966|ref|ZP_04198320.1| Transporter, drug/metabolite exporter [Bacillus cereus AH603]
gi|228718335|gb|EEL69969.1| Transporter, drug/metabolite exporter [Bacillus cereus AH603]
Length = 295
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 97/294 (32%), Gaps = 10/294 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYVILKITEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + + + S TP V + L
Sbjct: 62 KKRPIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAFIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTTRRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASTRF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLIITTYAIFFSLFFITPFMVWEFQTNPIEHMNMYVVLGVLYLGIISTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVIITTFEKR 294
>gi|195977535|ref|YP_002122779.1| drug/metabolite transporter (DMT) superfamily protein
[Streptococcus equi subsp. zooepidemicus MGCS10565]
gi|195974240|gb|ACG61766.1| drug/metabolite transporter (DMT) superfamily protein
[Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 314
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 107/298 (35%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G+ + A I WG++ + Q+L +V + + S R++ S + ++ Y ++++
Sbjct: 6 KGSTMILLAGIAWGLSGVSGQYLIAHEVGINALTSLRLIISGLVLS-SMAYMRQRDAVIR 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L++S L ++ ++ A+ + +++P++ + S +
Sbjct: 65 LLKDKRLLRELLIYSLFGLTLNQYAYLLAIRYSNAGTATVLQYLSPILVLVYLSFKSRRL 124
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ A L IL +IM H L + + K + + G
Sbjct: 125 PAAGESCAICLAILGTVIMACHGDLSHLAINPIGLFWGLFAAVTYAYCVIKPAKLIADWG 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + + + G+ F + F G
Sbjct: 185 SLLIVGLAMLMGGVIFPILTRAWQYPLAMTYGNLRALFGIIGIGTIFAYTFFLKGASIIG 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ P+ + ++ ++K+ + + +++IA++V L ++ + + K
Sbjct: 245 PIKATLLASIEPVASVFFAIILMKETFHPIDLLGMALILIAVLVISLRDLLLAQRKKQ 302
>gi|182417580|ref|ZP_02626329.2| transporter [Clostridium butyricum 5521]
gi|237668599|ref|ZP_04528583.1| transporter [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182378593|gb|EDT76121.1| transporter [Clostridium butyricum 5521]
gi|237656947|gb|EEP54503.1| transporter [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 299
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 88/296 (29%), Gaps = 9/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G + + ++WG + ++ V I+ R + + I
Sbjct: 1 MNKSNIKGNVILMITALIWGTAFVAQSVGMDYVGPFTFITARYIVGGVFLIPCIYLLDKI 60
Query: 78 LSLLKDTLKNPKAVGMLVF---SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + V L F + + F + VI L
Sbjct: 61 GKKTVKESSHKDKKTLFVAGVLCGIALFTASCFQQIGIQYTTVGKSGFITSLYIVIVPIL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G +F K+ + I+ ++ ++ L ++ + G + + A+CF+ + +
Sbjct: 121 GILFKKKVPIKV-WISVVISLVGLYLLCMKEGFSISKGDFLILICAFCFSIHILIIDKYS 179
Query: 195 GFF----IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + V+ L + + + + G
Sbjct: 180 SIVDGVRMSCIQFFVAGFLGVILMILFENPSITDILSAYNPILYAGIMSSGVAYTLQIMG 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
K ++ + ++S IL + + I +V IA+++ LP
Sbjct: 240 QKYTTPVLATLIMSLESVFAVISGWIILGEVLSFKEFIGCCLVFIAIILAQLPDRK 295
>gi|254302807|ref|ZP_04970165.1| DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148322999|gb|EDK88249.1| DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 287
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 97/283 (34%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R S + + + +
Sbjct: 4 SNKTKGVFWMLISVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSFITSAYILYKTRESIKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + V YAL + ++PV +FLK
Sbjct: 64 AKE------NIPFVFGRSFFGFVGMMANFYALENLTMAEANMLNKLSPVFVTICACIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q+I +L++++++ + S P + ++A +SA + G
Sbjct: 118 EKVDKKQVIGIILMLIAVVFVIKPSFSPEVIPSLAGLFSAVLAGFSYTIIRYLYGKVKAE 177
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L V + ++G G+ + +Y A S V
Sbjct: 178 INVFYFSLLSVVCTFPLMMMNFVKPNLFEIFMLVVGIGVSAAMGQFGLTYAYTFAPASEV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYL 301
I Y + ++ + D I I++ A+ +YL
Sbjct: 238 SIYNYVIIITSMLMDYILFSTIPDLFSFIGGFIIMTTAIYLYL 280
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 33/76 (43%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
F+ G Y ++ ++ ++ +P+ + + + LK+ +D + I
Sbjct: 68 IPFVFGRSFFGFVGMMANFYALENLTMAEANMLNKLSPVFVTICACIFLKEKVDKKQVIG 127
Query: 290 FGIVVIAMVVYLLPTV 305
+++IA+V + P+
Sbjct: 128 IILMLIAVVFVIKPSF 143
>gi|313898574|ref|ZP_07832109.1| putative membrane protein [Clostridium sp. HGF2]
gi|312956458|gb|EFR38091.1| putative membrane protein [Clostridium sp. HGF2]
Length = 291
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 100/282 (35%), Gaps = 2/282 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L+ + +L+GITPL T+ + + V+ +R L+ +P + + S+
Sbjct: 4 KGILYTVLSAVLFGITPLITRAVYGYGANSMTVVFYRSLFVIPMLAAIMKGRHISFSISA 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L+N + + T + + + + + FV+ + + + +
Sbjct: 64 HDLRNTGIIAIFGSGLTTILLFTSYSYIDVGCATTLHFLYPVFVSLLCFAVYHEILSRRK 123
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L L + + L + LL+ +T++ Y + + + I +
Sbjct: 124 LTALSLALLGALCFFDLSNSGSMLGLLLAAGSGLTYAFYMVQLEKTRLSHQNAYKISFYL 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L +V++ F L L L+ + + + GI+ ST +
Sbjct: 184 AIFILLETLVYHLLFSSIQFILPWNAYGLILLLSLVSSFLAVVLLQKGIQYLGSSTASLF 243
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P+ +V LK+ + + I I+ A+++
Sbjct: 244 CLFEPVTSVVCGALFLKEALTPAKIIGCCIIFTALIIMSREQ 285
>gi|167764954|ref|ZP_02437075.1| hypothetical protein BACSTE_03346 [Bacteroides stercoris ATCC
43183]
gi|167697623|gb|EDS14202.1| hypothetical protein BACSTE_03346 [Bacteroides stercoris ATCC
43183]
Length = 303
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 98/299 (32%), Gaps = 18/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G LF A ILWG+ + L + S L V + R++ + + ++
Sbjct: 2 NKNIQGHLFALTANILWGLMAPVGKSALVEFSALSVTTFRMVGAAACFWLLSLFCKREQV 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+D LK + + L + G +I+ L S P++++ + +++L
Sbjct: 62 DHRDMLK------IFFAALFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTMIVAAIYL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTI 188
KE + + +++ + + LI+ + S G L +A +
Sbjct: 116 KEPVTNKKVLGIFVGAMGALILIMSSSNAGSGNGSIMGDLLCLIAQISFSIYLTVFKGLS 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S M V A ++ + + + +
Sbjct: 176 QKYSPITLNKWMFVYASMCYIPFSYHDVAAIQWAETSTAALLQVGYVVVGGSFLAYICIM 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ + +V + + + I +V + + +
Sbjct: 236 TAQRLLRPTVVSMYNYMQPIVASIVTVIVGMATFNMEKGIAIALVFLGVYIVTQSKSRK 294
>gi|289551414|ref|YP_003472318.1| Integral membrane domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|289180945|gb|ADC88190.1| Integral membrane domain protein [Staphylococcus lugdunensis
HKU09-01]
Length = 289
Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 98/287 (34%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R ++ F I
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNFVAMFIPLFFIY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + I+A+ + P ++ L +FL
Sbjct: 56 KQPMFGKLRNQPLLIGRSTLGLIGVLLNIFAIDHMVLSDADTLMKLNPFWTILLSLLFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ I+ +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQISAMIIAIMGMLLIVKPEFSSAMLPSLAGLFSGIFAASAYTCVRALSRREQPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ F L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFSIATFEPMTTTQILYLLGAGLAAAVGQIGITLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + + + + + D + + I++ A Y+
Sbjct: 236 IFTYASIIFTALFGFILFGETPDMYAIVGYIIIISASY-YMFDQARR 281
>gi|121534788|ref|ZP_01666608.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
gi|121306583|gb|EAX47505.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
Length = 308
Score = 77.3 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 88/287 (30%), Gaps = 12/287 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G L + + + ++ +F + V+++R + I +
Sbjct: 6 LGVLLIIFSACGFATLAIFIKFAYAAGANTVTVLAYRFTIAALLFGAVIRLCGLDFRVT- 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+AV + + + F +L L + P + L + E
Sbjct: 65 ----GKQAVQLCLLGGIGYGLMSTLFALTVLYLPASLAGIILYTYPALVSVLSFLVGDEL 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----WSAYCFARKTIPVGSSEGFF 197
+ +A ++ L+++ S L + A + + +
Sbjct: 121 FGWRKGVALVICFTGLVLVLGVSLTGLNTTGAAFGLGSALVYSCYIVAGNRLLKGIDPLV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V A+ +V SG + L L F G+ R +
Sbjct: 181 STFYVCTAAAVVFVAGGMLSGTLIWSLSLQGWLAILGIAVFATCIGILGFFAGMYRIGAT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ P++ ++ S +L++ I ++ +++ ++V L
Sbjct: 241 NASIISTFEPVITVLLSALLLEERITAIQGFGGLLILAGVLVLQLTG 287
>gi|255320765|ref|ZP_05361940.1| RarD protein [Acinetobacter radioresistens SK82]
gi|262379459|ref|ZP_06072615.1| chloramphenicol-sensitive protein [Acinetobacter radioresistens
SH164]
gi|255302142|gb|EET81384.1| RarD protein [Acinetobacter radioresistens SK82]
gi|262298916|gb|EEY86829.1| chloramphenicol-sensitive protein [Acinetobacter radioresistens
SH164]
Length = 311
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/295 (18%), Positives = 124/295 (42%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A + +G+ +T FL ++ + + R+L +LP + F + + +
Sbjct: 3 KGVVLSVTASLTFGVLYFFTTFLAPLNSEQTFAWRMLSTLPFLTFFMYWIGDFKYISAIW 62
Query: 85 LK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P+ + ML+ S+ + F++ + +G S YF+ P++ V +G + KE
Sbjct: 63 QRLKAKPQFILMLLVSSILCTSQLWLFLWGPMNGRGLQVSLGYFLLPLVMVLIGCILFKE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+L+ Q++A L + + GI + +AV + Y F RK I GF+ ++
Sbjct: 123 KLSRFQVVAVALAAIGVGHELWRIGGIAWETAYVAVAYPFYFFLRKKIHTDHLGGFWWDI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A++ S + + G G L++ + + + G
Sbjct: 183 VLILPVAIYLSSIGLHSYSQFLAYP--HLFPAIAGLGALSALGLGSYILASRYLPMVIFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ Y P+L + + L + I + + + A++V ++ ++ + + K
Sbjct: 241 LLSYLEPVL-LALASVALGEAISGDEWLTYIPIWCAVLVLVVEGSLHLYRQQKNK 294
>gi|253732825|ref|ZP_04866990.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus TCH130]
gi|253729190|gb|EES97919.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus TCH130]
Length = 288
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 102/293 (34%), Gaps = 6/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R + ++ F I
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNIVAMFIPLFFIY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L VFL
Sbjct: 56 HQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + + L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I Y + + + + + D T+ + +++ A ++ K
Sbjct: 236 IFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK 288
>gi|237723155|ref|ZP_04553636.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229447677|gb|EEO53468.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|295087947|emb|CBK69470.1| Predicted permeases [Bacteroides xylanisolvens XB1A]
Length = 295
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 86/294 (29%), Gaps = 5/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+S+R + +
Sbjct: 1 MNRIKGILYAAVSSSTFGLAPFFSLTLLLAGFSAFEVLSYRWGVATIALTLFGWCSGCSF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K + +L + + I + ++ F
Sbjct: 61 RLEKKDFLVVLLLSLLRAVTSFSLLIAYQNIATGVASTIHFMYPLAVSLVMMYFFQEKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEG 195
L + ++ S + + + +A +++ Y +
Sbjct: 121 LWVMFAVFMSLLGAALLSSGELEAKNGDTIVGLVAACVSVFSYAGYIVGVRMTRAVRINS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V+ + + Y + + G + L + IK A
Sbjct: 181 TVLTCYVMGLGTVLYFIGALTTSGLRLVADGYTWLIILGLALPATAISNITLVRAIKYAG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL +V VF+ K+ I ++++A+ V + N
Sbjct: 241 PTLTSILGAMEPLTAVVIGVFVFKELFTLNSAIGIILILLAVSVVIFRKQKNER 294
>gi|163816333|ref|ZP_02207699.1| hypothetical protein COPEUT_02520 [Coprococcus eutactus ATCC 27759]
gi|158448330|gb|EDP25325.1| hypothetical protein COPEUT_02520 [Coprococcus eutactus ATCC 27759]
Length = 315
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/306 (11%), Positives = 98/306 (32%), Gaps = 12/306 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFA 70
++ + G + V I+WGI+ + Q++ V+ +++ R S + F
Sbjct: 1 MTNTQTAHSQKFGIILVLSCGIMWGISGVLGQYIFQASDVNSIQLSIIRQFISGIVLLFI 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
L K + ++ FS T + + ++ + F ++
Sbjct: 61 S-ALKKDKKALSIWSKPKSVISLIFFSLTGVMGVQFTYFASIEHSNAATGTVIQFTYIIM 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCF 183
+ ++F+ ++ + + I+ + + ++ H P L + +
Sbjct: 120 ILIYTAIFMHKKPQNYETISVICAFAGIFLIATHGRLNSLAISFPALFWGLISAVCFTIY 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ +S G + ++ A ++ + I + +
Sbjct: 180 CLYPQKLYNSYGLVNVIGWASLFASIILLLVTRTFTFPHMNIQILTASLA-VAIVGSLIP 238
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F I+ GI + P+ + + +L + F +++ ++ + +
Sbjct: 239 FTIYGIGISILGSVKASLFVTVEPVTSALLTWLVLGTKFSGMDLAGFLLILGSIQMVAIQ 298
Query: 304 TVINSG 309
T N
Sbjct: 299 TFRNEK 304
>gi|317475224|ref|ZP_07934491.1| integral membrane protein DUF6 [Bacteroides eggerthii 1_2_48FAA]
gi|316908677|gb|EFV30364.1| integral membrane protein DUF6 [Bacteroides eggerthii 1_2_48FAA]
Length = 303
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 101/299 (33%), Gaps = 18/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G LF A ILWG+ + L + S L V + R++ + + ++
Sbjct: 2 NKNIQGHLFALTANILWGLMAPIGKSALAEFSALSVTTFRMVGAAACFWLLSLFCKREQV 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+D LK + + L + G +I+ L S P++++ + +++L
Sbjct: 62 DHRDMLK------IFFATLFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTMIVAAIYL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTI 188
KE + + +++ + + LI+ ++S G L +A +
Sbjct: 116 KEPVTNKKVLGIFVGAMGALILIMNSQNTGSGGGSVIGDLLCLIAQISFSIYLTVFKGLS 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S M V A ++G + + + + +
Sbjct: 176 QKYSPITLNKWMFVYASMCYIPFSYHGIAAIQWAEVSTAALVQVGYVVVGGSFLAYICIM 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ + +V I + + I +V + + +
Sbjct: 236 TAQRLLRPTVVSMYNYMQPIVASIVTVVIGMATFNLEKGIAIALVFLGVYIVTQSKSRK 294
>gi|315658922|ref|ZP_07911789.1| integral membrane domain protein [Staphylococcus lugdunensis
M23590]
gi|315496046|gb|EFU84374.1| integral membrane domain protein [Staphylococcus lugdunensis
M23590]
Length = 289
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 99/293 (33%), Gaps = 6/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R ++ F I
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNFVAMFIPLFFIY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + I+A+ + P ++ L +FL
Sbjct: 56 KQPMFGKLRNQPLLIGRSTLGLIGVLLNIFAIDHMVLSDADTLMKLNPFWTILLSLLFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ I+ +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQISAMIIAIMGMLLIVKPEFSSAMLPSLAGLFSGIFAASAYTCVRALSRREQPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ F L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFSIATFEPMTTTQILYLLGAGLAAAVGQIGITLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I Y + + + + + D + + I++ A S ++
Sbjct: 236 IFTYASIIFTALFGFILFGETPDMYAIVGYIIIISASYYMFDQARRESNAQQS 288
>gi|212691926|ref|ZP_03300054.1| hypothetical protein BACDOR_01421 [Bacteroides dorei DSM 17855]
gi|212665528|gb|EEB26100.1| hypothetical protein BACDOR_01421 [Bacteroides dorei DSM 17855]
Length = 304
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 92/304 (30%), Gaps = 22/304 (7%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G + + A IL+G++ ++L V + R +++ +F ++
Sbjct: 1 MKGHILILSANILFGVSMPVFKYLLTSDVPPEAITIMRAIFACMMFWFVSLFMPKEK--- 57
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + + ++ F+ L + S P+ + L +V LKE
Sbjct: 58 ---VLPKDLRTLFICALCGVGINQWLFVVGLKSSSPVNASIIATAVPIFVLLLAAVVLKE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI--------PLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + L + +++ +S +L + + + P+
Sbjct: 115 PVTAKKSFGVFLGVSGGVLLVFNSAHTSDGTASLWGDTLMLLNQLMYSVYLVLSKPLSRY 174
Query: 194 EGFFIEMCVLAIP------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
M + + L F +
Sbjct: 175 YSSVTMMKWMFLFSTLTLAPFCLPHVQHVPIFHRETFDITQMCALLYLLFGATFVAFMLI 234
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+K + +TV + Y P++ V ++ + + + + + +V + +
Sbjct: 235 PMALKHIRPTTVSMYNYVQPIVASVIAIAVGQDTLSIQKLLSAALVFAGVYLVTKSKKKE 294
Query: 308 SGKN 311
KN
Sbjct: 295 EMKN 298
>gi|330977674|gb|EGH77577.1| hypothetical protein PSYAP_13000 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 295
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 81/287 (28%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F+ A L+ +++L + ++ + I S GL +
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYVVHTLLMACIFMSSSGLRV 71
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +A+ L T L F+ P++ L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATA-----VNFLAPLLVTALSVPLLH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q A ++ + ++I+ G + SA CFA + F
Sbjct: 127 ERVTRGQWTAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSPT 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LF + + + + FL+ G + + + A + +
Sbjct: 187 TSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAMLA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 247 PFSYCQIVFAGLLGYLVFDHTPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|329115660|ref|ZP_08244382.1| S-adenosylmethionine uptake transporter [Acetobacter pomorum DM001]
gi|326695088|gb|EGE46807.1| S-adenosylmethionine uptake transporter [Acetobacter pomorum DM001]
Length = 312
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/295 (16%), Positives = 98/295 (33%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P G L + + I+ +++ L ++ EV S +V F
Sbjct: 4 SPPTKGLLLSLLGFAAFSISDAFSKLLTGRLNPFEVAF-----SGGVFGLLLVPFVKSRG 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + GM A + + + + F+ P I+ L V L
Sbjct: 59 QSWLNILPIQKPGMWWIRAVATFIATAASVESFMLLSMPEALSLMFLMPFIATILSVVAL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI-PVGSSEGFFI 198
KE+++ +A + +L++ PL +A A I + G
Sbjct: 119 KEKVSLWGWVAVAIGFAGVLVVLRPGVRPLHFGHACALAAAIASAVNVIAYRVAGTGTTK 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + A + + + + D FL GYG L + + S
Sbjct: 179 LGVLGSSLAGPLLGDGLLALPNFTWPHTVTDWSFLFGYGFLAALGQLLIMLAATLTPASR 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V + +YT + ++ S + +P+D I IV ++ ++ + + K +
Sbjct: 239 VALPQYTQMVWAVLFSYLLFHEPLDKWTIIGVTIVTLSGMLDWFRKHLLALKQRR 293
>gi|300869865|ref|YP_003784736.1| putative transmembrane protein [Brachyspira pilosicoli 95/1000]
gi|300687564|gb|ADK30235.1| putative transmembrane protein [Brachyspira pilosicoli 95/1000]
Length = 303
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 100/289 (34%), Gaps = 16/289 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G +F A I+W + ++L +S +E+ +R L + + + + L
Sbjct: 9 GYIFAILAVIIWSTNFVAARYLTGLSPIEISFYRWLVTFLVLTPFCIVSL----IKNIHL 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ S + + F A T S ++P+I + V K+ L+
Sbjct: 65 LKGLWIKIIIISVLGITIFNTFVYLAAHTSNATNMSLIATLSPIIIALISRVLWKKHLSK 124
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
Q +IIL ++I+ G + A+ + R
Sbjct: 125 PQKQGLFIIILGVIILLTKGSIEVISKLKFSIGDLYMIFAVILFAVYTLTLRIKPKDFPQ 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
FF M + + L ++ + + L + + ++ F ++ + +
Sbjct: 185 TTFFYLMVAIGLIPLAILMIPKYINNQAHVLNFNLAIVLIYIGIFPSALGFIFWNIAVSK 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I+ + P V ++ +L + + I +++I ++ L
Sbjct: 245 IGAMKASIIYDSVPFFSTVGAIILLHEKPYIAQIIGGALILIGIIYSSL 293
>gi|288905440|ref|YP_003430662.1| hypothetical protein GALLO_1239 [Streptococcus gallolyticus UCN34]
gi|288732166|emb|CBI13731.1| putative membrane protein [Streptococcus gallolyticus UCN34]
Length = 310
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/297 (22%), Positives = 144/297 (48%), Gaps = 7/297 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS---GG 77
T +G L YILWG LY + L V+ S+R+++++ + +V
Sbjct: 17 KKTNLGILLGLITYILWGFLSLYWKLLSGVNSYNTFSYRIIFTVLTMLVYMVLSKNKERY 76
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + + + + M V ++ ++A++W +I+A+ +Q SF Y++ P++S+ L V
Sbjct: 77 RGEIRQLISHKQELAMAVLASFLIALNWLTYIFAVSHQQATQASFGYYIMPLVSILLALV 136
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL ERL+ A ++ + + I+ +++G PL+S+ +AVT++ Y +K + + S
Sbjct: 137 FLHERLSPWMTAAIIIAGIGVGILAINTGQVPLVSILLAVTFALYGLVKKNVKLSSDVAM 196
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E V+A L Y+++ + L L +F+ +KRA L
Sbjct: 197 LVESSVVAPFVLIYLLFFSKESLLDYSLLENVLLLASGIVTA---IPLLLFAEAVKRAPL 253
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ +G ++Y P + + +VF+ + + F + IA+ +++L +++ K
Sbjct: 254 NIIGFIQYINPTIQLAIAVFVFHEKVGNGEVSGFIFIWIAIAIFILGQLMSLRKKSR 310
>gi|268679459|ref|YP_003303890.1| hypothetical protein Sdel_0824 [Sulfurospirillum deleyianum DSM
6946]
gi|268617490|gb|ACZ11855.1| protein of unknown function DUF6 transmembrane [Sulfurospirillum
deleyianum DSM 6946]
Length = 301
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/303 (11%), Positives = 98/303 (32%), Gaps = 17/303 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N +G LF+ A + W + + + + + + V+ R++ + + I
Sbjct: 2 NQPKTDPIGILFLLIAMLTWASSFIALKSAIGPLGPMSVVFGRMVIASLCFVYFI----- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +L+ + ++ F AL + P+++ S
Sbjct: 57 -KQFRALSFTRHDIKYILLLTLFEPCFYFIFEAKALQLTTASQAGMITSMMPLMTAIAAS 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP----------LLSLAIAVTWSAYCFARK 186
LKE L+ +I ++L ++ + ++L + L + + Y + +
Sbjct: 116 FVLKEYLSKRIVIGSVLAVVGAIWLSLGAQSSENASNPLLGNFLEFCAMICGTWYAISVR 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ S F + F+ + L ++ + +
Sbjct: 176 YLSQKFSALFLTAIQAFVGTIFFFPLAIWEYFTLPMHLSLEVFGWLCYLGIVVTLGGYGM 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F+ + R + S + P+ ++ + L + + + ++ +++ LP +
Sbjct: 236 FNLALSRIEASKASVFVNLIPVFTVLLAYLFLNERLSQTEMLASFVIFGGIIISQLPNLT 295
Query: 307 NSG 309
Sbjct: 296 KKK 298
>gi|257784107|ref|YP_003179324.1| hypothetical protein Apar_0302 [Atopobium parvulum DSM 20469]
gi|257472614|gb|ACV50733.1| protein of unknown function DUF6 transmembrane [Atopobium parvulum
DSM 20469]
Length = 301
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 84/286 (29%), Gaps = 12/286 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A I+ G + + + +++ R+L + K PK
Sbjct: 13 LIALIICGSNGIVASLI-NLPSYQIVFFRMLLGTLFLLTV----KFVQKEAFTIQKYPKD 67
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
L+ S L + W F A + + Y+ PVI + L E+ +I+
Sbjct: 68 FQALIGSGIALGLQWTFLFEAYQLVGVGIATLEYYCGPVIVMALTPFLFGEKFTTKKILG 127
Query: 151 ALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L++++ ++ + L L + + G L I
Sbjct: 128 FLVVVIGAALIIGYGVGLNLSPTGLLLGALSAVLYAIMVICNRQLKNVSGIEGTSIQLGI 187
Query: 206 PALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ L ++ + + + V +
Sbjct: 188 GCAVVALVTIVFHSIELPADPASVNWLAVLTIGLFNTGLGSFLYFPQLTKIPVQRVAVFG 247
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y PL ++ S IL +P ++ I ++ + L ++
Sbjct: 248 YLEPLSAVIFSALILGEPFGLLKIIGTACIIGGAIFAELSGASSNK 293
>gi|186477629|ref|YP_001859099.1| hypothetical protein Bphy_2881 [Burkholderia phymatum STM815]
gi|184194088|gb|ACC72053.1| protein of unknown function DUF6 transmembrane [Burkholderia
phymatum STM815]
Length = 336
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/306 (10%), Positives = 82/306 (26%), Gaps = 13/306 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ A+ + L + A +WG + + L+ + R L V A
Sbjct: 22 KTATRQHLRANLLMLVAATIWGSAFVAQRLSLDSIGPFLFTGLRFLLGAFVVLIAWSIAR 81
Query: 76 GGLS-------LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
+P ++AV L + F
Sbjct: 82 RRKPADARDAAASLSPSASPALWRDGALLGLLVAVSISCQQIGLQYTKVANAGFI-SSLY 140
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL----LSLAIAVTWSAYCFA 184
V+ V L V L+ + + A L L + +++ + +
Sbjct: 141 VVIVPLMGVVLRHQTGIGVWLGATLAALGMYFLSVDEHFSIVYGDWLQLAGSLVISAQVV 200
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + + + A+ + L G L +
Sbjct: 201 LVSRFARRHDPLALALVQFVVCAVVSLAVGLAVDPLRIGDIVRAAPAILYGGALSVGVAY 260
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I K A + ++ + ++ +L + + + +++ ++V +
Sbjct: 261 TIQVVAQKHAAPAHAAVIFSMEGVFAALAGWLVLGETLAPRALLGCALMLAGLIVCQVMP 320
Query: 305 VINSGK 310
+ + +
Sbjct: 321 MWTTRR 326
>gi|237742335|ref|ZP_04572816.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|256845663|ref|ZP_05551121.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_36A2]
gi|294785090|ref|ZP_06750378.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_27]
gi|229429983|gb|EEO40195.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|256719222|gb|EEU32777.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_36A2]
gi|294486804|gb|EFG34166.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_27]
Length = 287
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 96/283 (33%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R S + + + +
Sbjct: 4 SNKTRGVFWMLVSVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSFITSAYILYRQKESIKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + V YAL + ++PV +FLK
Sbjct: 64 AKE------NIPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q+I +L++++++ + S P + ++ +SA + G
Sbjct: 118 EKVDKKQVIGIILMLMAVVFVIKPSFSPEVIPSLVGLFSAILAGFSYTIIRYLHGKVKSE 177
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L V + ++G G+ + +Y A S V
Sbjct: 178 INVFYFSLLSVVCTFPLMMMNFIKPNLFEVFMLIVGIGVSAAMGQFGLTYAYTFAPASEV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYL 301
I Y + ++ + D I I++ A+ +YL
Sbjct: 238 SIYNYVIIITSMLMDYILFSTIPDLFSFIGGFIIITTAIYLYL 280
Score = 36.0 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 33/76 (43%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
F+ G Y ++ ++ ++ +P+ + + + LK+ +D + I
Sbjct: 68 IPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLKEKVDKKQVIG 127
Query: 290 FGIVVIAMVVYLLPTV 305
++++A+V + P+
Sbjct: 128 IILMLMAVVFVIKPSF 143
>gi|29833539|ref|NP_828173.1| hypothetical protein SAV_6997 [Streptomyces avermitilis MA-4680]
gi|29610662|dbj|BAC74708.1| putative membrane protein [Streptomyces avermitilis MA-4680]
Length = 335
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/308 (9%), Positives = 86/308 (27%), Gaps = 31/308 (10%)
Query: 15 SKENASLPTMMGTLF--VFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFA 70
+ + + G + + +G + + + L + L V+ RV + +
Sbjct: 5 TSQASQGNRGKGVGLGLALASAVAFGGSGVAAKPLIEAGLDPLHVVWLRVSGAALVMLPL 64
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
V L ++ F +A + A+ + ++ P +
Sbjct: 65 AVRHRALLRRRPAL--------LIGFGLLAVAGVQACYFAAISRIPVGVALLVEYLAPAL 116
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMT-LHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + + + +L + L + + SG+ +L + + +A C
Sbjct: 117 VLGWVRFVQRRPVTRAAALGVVLAVGGLACVVEVWSGLGFDALGLLLALAAACCQVGYFV 176
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL------------------ 231
+ E + + + + G D
Sbjct: 177 LSDQGSETGEDAPDPLGVIAFGLLIGALVLTVVARPWTMDWSVLGGRADMNGDSVPAALL 236
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ + ++R G++ ++ V + +L + + + I
Sbjct: 237 LGWIVLIATVVAYVTGVLSVRRLSPQVAGVVACLEAVIATVLAWVLLGEHLSAPQIIGGA 296
Query: 292 IVVIAMVV 299
+V++ +
Sbjct: 297 VVLVGAFI 304
>gi|297528943|ref|YP_003670218.1| hypothetical protein GC56T3_0590 [Geobacillus sp. C56-T3]
gi|297252195|gb|ADI25641.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
C56-T3]
Length = 302
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 94/290 (32%), Gaps = 13/290 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T+ +F + + ++ ++ Q + +R+ ++ + + L +
Sbjct: 5 STIKAYAALFIGALAVSTSAIFVKW-SQAPSAVIAFYRLFLAVAIMTPLFLRHRSELRGI 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + S +LA H+ + +L + + P+ + G++F +E
Sbjct: 64 -----SRRDWLFSLCSGVLLAFHFILWFESLDYTSVASSVVLVTLQPLFAFAGGALFFRE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
RL + +A+L I+ ++++ ++ + +
Sbjct: 119 RLTVGAVGSAVLAIIGSVLISWGDFRVSGEALYGDGLALLSCAFVTAYWLFGQEVRQRLS 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V I A ++ FL + + ++ +K
Sbjct: 179 LMTYTYIVYGISAAVLWLYAMLFRLSLTAYQLTDWLCFLALAVIPTLLGHSVMNWAVKWV 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
STV + P+ + ++ +PI + I ++ + +YL
Sbjct: 239 SASTVSMAILFEPIGASALAYWLFGEPIRPFQWIGGIFILTGIALYLWEK 288
>gi|295093530|emb|CBK82621.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Coprococcus sp. ART55/1]
Length = 292
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 87/297 (29%), Gaps = 7/297 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++K G LF+ A + + + + + ++ R + ++
Sbjct: 1 MAKRLVIKDKYKGILFIIMAGFFFSLMTFFVRLSGDLPTMQKAFFRNAVAAVVAIAMLMR 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ K + A + + I YA+ + ++P ++
Sbjct: 61 TEEKFKIKKSSWPGIAARSICGTTGLI------CNFYAIDKLNIADANILNKLSPFFAII 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LKER N ++ + +L L + S A+ V
Sbjct: 115 ASYFVLKERANRVEWASVVLAFAGALFVVKPSFHMDFLYAMVGVAGGLGAGIAYTYVRKL 174
Query: 194 EGF-FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ ++F + + L+ GL + + +
Sbjct: 175 GKQGERGPVIVMCFSVFSCLVTLPFIILDHAPMTWQQIVCLLCAGLAAAGGQFSITAAYQ 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+A + + +Y+ + + L Q D + I + I++ + V T+
Sbjct: 235 KAPAREISVFDYSQVIFAAILGFVFLDQIPDMLSIIGYVIIIGSAVFKWWYTMRQDR 291
>gi|239623674|ref|ZP_04666705.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521705|gb|EEQ61571.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 303
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 81/291 (27%), Gaps = 11/291 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL- 85
+ + +WG+ + ++ V L R L + I YF +
Sbjct: 7 VLLLLTAAIWGVAFVAQSVGMDYVGPLTFNCVRSLIGGVVLLPCIWYFDKKRKRERQVPV 66
Query: 86 ---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V V L + F + + F +I LG F K+
Sbjct: 67 IPGARKTLVAGGVCCGVALCLASNFQQFGIQYTTVGKAGFITACYIIIVPILGLFFKKKC 126
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLS-----LAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + + A L ++ L ++ + G ++ + + + +G
Sbjct: 127 -SPVIVGAVALSVVGLYLLCMTGGDLAVNKGDLLMLVCALLFSVHIMVIDFFSPVVDGVK 185
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + L + + + G K +
Sbjct: 186 MSCIQFFVCGAISGIGMLLYETPDMGQILAAWAPVLYAGVMSCGVAYTLQIIGQKGVNPT 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ + +++ IL Q + ++ A+++ LP S
Sbjct: 246 VASLILSLESSISVLAGWAILGQKLSAKELAGCALMFGAIILAQLPVGRKS 296
>gi|169342204|ref|ZP_02863289.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
gi|169299688|gb|EDS81745.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
Length = 297
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 85/286 (29%), Gaps = 6/286 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A + L ++ V+ + + + V F I Y G
Sbjct: 2 NSKFKGIIFMILASAAFATMNLLSKLAVGVNSYQKTFLTNVVATLIVCFIIAYKKGSFFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K++ K + YAL + + P ++ + +
Sbjct: 62 KKESRKYLLVR------GVTGTLSILTNYYALDKMFLSDATILTKLAPFFTIIFSYLLIS 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q ++ L + + ++ SA +
Sbjct: 116 EKITKKQFTLLIVAFAGSLFVIKPQFSTAIIPSLIGVASAAFAGIAYTMIRVIGDKEDFW 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + S + + + L L+ G+ + + K A S +
Sbjct: 176 TIILSFTSIATIVMLPSMFMNTDNLTLQNILLLVSAGIAFTLGQVALTIAYKNAPASEIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ +Y ++ + K+ D + + I+V + ++ +L
Sbjct: 236 MYDYIGLIIAAIYGFMFFKEIPDFLSFTGYIIIVGSSILNILGNKK 281
>gi|116334517|ref|YP_796044.1| DMT family permease [Lactobacillus brevis ATCC 367]
gi|116099864|gb|ABJ65013.1| permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus brevis ATCC 367]
Length = 328
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/312 (12%), Positives = 95/312 (30%), Gaps = 13/312 (4%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWS 63
+K+Y + + + M G + A +WGI+ QF+ + +S R + +
Sbjct: 9 RKDYQGLENSKATTENVMKGIFWATMASAMWGISGTVLQFISQSQDIPASWFLSTRTMGT 68
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ + G + + +L ++ L + F A+ T +
Sbjct: 69 GIVLLVVSLVMYG-KKTFAVFRSGREIMWLLTYAIFGLGANLLTFYIAVQTGNAAAATIL 127
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF 183
+++P+ V VF +R +IA ++ ++ + + I L++ +
Sbjct: 128 QYLSPLFIVVGSLVFKHDRPLRSDLIAFVVAMVGVFLAITRGHISQLAIPLNSLLWGIGS 187
Query: 184 ARKTIPVGSSEGFFI---------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
+ + + +
Sbjct: 188 GITAACYVVLPRPLVKDEGHAPIVVLGWGMFLSGIVFNLYHPFFLNTPPITGGLVASMST 247
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ F + Y A + I++ T P++ + S+ L I I +VV
Sbjct: 248 VILVGTILPFSLVLYSTHFAPSDVISIVDATQPVMTFILSIIFLSLKITVAEVIGSVLVV 307
Query: 295 IAMVVYLLPTVI 306
+A+ +
Sbjct: 308 VAIYLLQRGRRK 319
>gi|90407414|ref|ZP_01215598.1| hypothetical protein PCNPT3_10223 [Psychromonas sp. CNPT3]
gi|90311445|gb|EAS39546.1| hypothetical protein PCNPT3_10223 [Psychromonas sp. CNPT3]
Length = 282
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 84/288 (29%), Gaps = 16/288 (5%)
Query: 30 VFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + + + + + V E+++ R + S+ S K
Sbjct: 1 MLLSAFAFALMSSCVKLVSTYGIPVFEIVAARAIVSVLI--------SYTDVKRKKISLW 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L+ + YAL T + ++ PV + L +FL+E++
Sbjct: 53 GNNKILLISRGLAGTLALFCIYYALSTLPLAEATLLQYLHPVFTAILAIIFLREKIQLST 112
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGSSEGFFIEMC 201
I+ +L LL++ A+ A A C A I V
Sbjct: 113 ILCISCCLLGLLLIVGTGLDQSAEHALPLLSVAAAIVGALCSAVAYIMVKRLSTTEDSSV 172
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ L G F + + L+ G+ + ++ + S
Sbjct: 173 IIFYFPLIAFPIAATLLGSDFVMPSTEALFLLLFVGIFTQIGQVGLTKAMQTEEASKATA 232
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y + I ++ I +++ + + +
Sbjct: 233 YSYIQVVFSITIGWLFFQESPSVWTLIGGSLIIAGAFINVFYNLKKKR 280
>gi|84684478|ref|ZP_01012379.1| Putative transporter, RhaT family, DMT superfamily protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84667457|gb|EAQ13926.1| Putative transporter, RhaT family, DMT superfamily protein
[Rhodobacterales bacterium HTCC2654]
Length = 318
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 97/285 (34%), Gaps = 7/285 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L+ A+ L+ + +FL S ++I L+S P V F ++
Sbjct: 2 NLAGPLYALLAFALYATHDVIIKFLGGTYSPFQLIFFSTLFSFPLVTFMLM------KDA 55
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P + ++ YA T F +P++ L L E
Sbjct: 56 TAGHLRPVHPWWTALRTVLASITGFTAFYAFSVLPLAQTYVLLFASPLLITLLSIPMLGE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R+ ++ A ++ ++ +L++ L +A SA C A ++ V +
Sbjct: 116 RVGIHRLGAVVVGLIGVLVVLRPGATDLTLGHLAGITSAVCNALASVIVRKIGRDERPVV 175
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ P V G + I L L + K + + V
Sbjct: 176 LMLYPMASNFVLMGILLAFVYKPMPIEHLGGLGVISALGFVAGLVLIAAYKNGEAAIVAP 235
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
M+Y+ + V FI + ++T + GI++ + + +
Sbjct: 236 MQYSQIIWASVFGFFIFGESLETATMVGAGIIIFSGLYIVFREAR 280
>gi|331013594|gb|EGH93650.1| hypothetical protein PSYTB_28860 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 306
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 9/305 (2%)
Query: 7 KKEYSKGLSKENAS----LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLW 62
K E +S + + G F+ A L+ +++L + ++
Sbjct: 5 KLEQGSAMSTASTPLSGVNQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYV 64
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+ I S GL +L+ +A+ L T L
Sbjct: 65 VHTLLMACIFMPSAGLRVLRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATA----- 119
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC 182
F+ P++ L L ER+ Q +A ++ + ++I+ G + SA C
Sbjct: 120 VNFLAPLLVTALSVPLLHERVTRGQWVAVVVGFIGVMIIIHPGGELFTPAILLPLSSALC 179
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
FA + F LF + + + + FL+ G
Sbjct: 180 FALYQLLTRLVSPFDSPTTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMS 239
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + A + + Y + + + I+ ++ +
Sbjct: 240 AHLLLTQAFRFAAPAMLAPFSYCQIVFAGLLGFVVFDHMPSPTAQAGIAIICLSGLAAAW 299
Query: 303 PTVIN 307
Sbjct: 300 QQRRK 304
>gi|320159296|ref|YP_004191674.1| hypothetical protein VVM_03043 [Vibrio vulnificus MO6-24/O]
gi|319934608|gb|ADV89471.1| protein of unknown function DUF6 transmembrane [Vibrio vulnificus
MO6-24/O]
Length = 834
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/329 (11%), Positives = 91/329 (27%), Gaps = 20/329 (6%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVL 61
+ + E + ++ L + I WG + L + + + R
Sbjct: 502 QPSKSLESKPTKGSNISFAQFVIAILCLLGTAISWGAMFPIAKNALTTMDAVHISLIRYG 561
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
+ + G SLL + +F + A L + +
Sbjct: 562 TASLIFVAMLAAKEGLSSLLPG----RDFFKLWLFGSFGFAGFSILAFAGLAYTKPQHGA 617
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT--------LHSGIPLLSLA 173
+ P+IS + K R ++ I++ +L + ++++ + +
Sbjct: 618 IIMALMPLISAVMMWTLKKARPSNFTIVSIVLALFGVVLVITKGELSALSGGSLFPSLVI 677
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL------FYVVWNGFSGGEHFFLGNI 227
+A + + V AL + + GF+
Sbjct: 678 LAGAFCWVTYTLGASYVSGYSVLRYTALSCFFGALTIVLVACFTNFAGFTHAPSLSQVLA 737
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ +++GI + P+ + + I
Sbjct: 738 VKWELIYLITFAGVIAVFSWNHGINTLGPINGVLFINMVPITAFTIG-MLRGETITNTEI 796
Query: 288 IVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
GI ++ +V+ + + ++S KS
Sbjct: 797 YGAGITILVLVLNNIYSRLSSKPKTVIKS 825
>gi|310826253|ref|YP_003958610.1| hypothetical protein ELI_0631 [Eubacterium limosum KIST612]
gi|308737987|gb|ADO35647.1| hypothetical protein ELI_0631 [Eubacterium limosum KIST612]
Length = 298
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 92/291 (31%), Gaps = 13/291 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ T++ L + ++WG+ + ++ L ++ L V++ R L S + +
Sbjct: 1 MKNIQTKNKTLLADLALITVALIWGVGFIASKAALVTITPLWVMTFRFLGSGVLLLILFL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + V M + + + F L +F V+
Sbjct: 61 --------KRVRRLDKRTVLMGMVVGSFMFTGMVFQTIGLDHTTASNQAFLIPSYVVLVP 112
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F+ + + + L + AALL + +++L + A ++ + + +G
Sbjct: 113 FVSWMMTRVKPRALDVAAALLTFAGVAVISLKPDFSMNLGDALTLIFAVVYSFQIVFLGL 172
Query: 193 SE----GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + L + F I +
Sbjct: 173 FVKETDVMSFTVVQMLTAGGLSLFAALVFAPPLDGVSATSAFGILYLVVFNTALAFLIQN 232
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ + ++ SV L P + G+V A+++
Sbjct: 233 IAQQYTTSTHASLLISLESVFGLIVSVIFLHDPFGPRMALGCGLVFAAVLL 283
>gi|281208025|gb|EFA82203.1| hypothetical protein PPL_04626 [Polysphondylium pallidum PN500]
Length = 556
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 89/302 (29%), Gaps = 26/302 (8%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G +F+ + + I L + + LE+ R + L G +
Sbjct: 262 KAKLGLIFMVASSFFFSIMALLVNIISKKGIQSLEIAFIRSAFGLIGCLLVLGSLRVN-- 319
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + L V + + + F +PVI+ L +V L
Sbjct: 320 ----PLGDKPKRLFLTIRGLSGTVSLAAYFFTITVLPLSEAVCISFTSPVITAALAAVVL 375
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------------IAVTWSAYC 182
KE+ I A+L ++ + I++ + I I ++ +
Sbjct: 376 KEKWGKFDAICAVLSLVGVGIISKPAFIFGSMAHDPNVPSEGHRLLYILIGIGGSFFSAL 435
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+G F+ + + A + + + L +
Sbjct: 436 SFVAVRKIGPGTNPFVLVAYFSAVASAVTLPASILFQKFVWPSGHEWLLLSTLGVIALIA 495
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + GI+ K + M YT + + + L + D + I +++ V
Sbjct: 496 QSLV-NRGIQLEKAAKAASMNYTQIIFTFLWELIFLNEKPDWLTIIGALLILSCAGVTAF 554
Query: 303 PT 304
Sbjct: 555 RK 556
Score = 36.0 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 45/135 (33%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+A ++ A + +E+ + LG+ P L
Sbjct: 269 FMVASSFFFSIMALLVNIISKKGIQSLEIAFIRSAFGLIGCLLVLGSLRVNPLGDKPKRL 328
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
FL GL + + + I LS + +T+P++ + +LK+ I
Sbjct: 329 FLTIRGLSGTVSLAAYFFTITVLPLSEAVCISFTSPVITAALAAVVLKEKWGKFDAICAV 388
Query: 292 IVVIAMVVYLLPTVI 306
+ ++ + + P I
Sbjct: 389 LSLVGVGIISKPAFI 403
>gi|186472947|ref|YP_001860289.1| transporter DMT superfamily protein [Burkholderia phymatum STM815]
gi|184195279|gb|ACC73243.1| RarD protein, DMT superfamily transporter [Burkholderia phymatum
STM815]
Length = 296
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/285 (19%), Positives = 112/285 (39%), Gaps = 4/285 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---L 81
G A L+ + +Y + L ++ L++ + RV+W++PG F I S L L
Sbjct: 8 RGIALSVSASTLFALLSVYAKLLTPLTGLDIFAWRVIWTVPGAFTLIALRSRLPQLQMLL 67
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ P+ +LV SA +L F++A L + S YF+ P+ V LG + E
Sbjct: 68 QRAIREPRTALLLVASAILLGAQLWVFLWAPLHGRMLEVSLGYFLLPLTMVLLGRFYYHE 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL LQ +A + +L + + V + + + +
Sbjct: 128 RLEPLQWLAVGCAAVGVLHELWVT-RAFSWPTLLVAIGYPPYFVLRRKINADSLTAFALE 186
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + L L G G L++ + + ++ GI
Sbjct: 187 MSLMLPFALAMAFSGGSFALLSGRVDMWLLLLPGLGALSTVALATYLKASRLLPMALFGI 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y P+L+++ SV +L + + + + + IA+ + L +
Sbjct: 247 LGYVEPVLLVIVSVTLLGETLTAQQLGTYVPIWIAVGLTALHSAR 291
>gi|71275205|ref|ZP_00651492.1| Protein of unknown function DUF6 [Xylella fastidiosa Dixon]
gi|71901976|ref|ZP_00684026.1| Protein of unknown function DUF6 [Xylella fastidiosa Ann-1]
gi|170731198|ref|YP_001776631.1| hypothetical protein Xfasm12_2145 [Xylella fastidiosa M12]
gi|71164014|gb|EAO13729.1| Protein of unknown function DUF6 [Xylella fastidiosa Dixon]
gi|71728262|gb|EAO30443.1| Protein of unknown function DUF6 [Xylella fastidiosa Ann-1]
gi|167965991|gb|ACA13001.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 311
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 100/291 (34%), Gaps = 8/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + + + +G+ + ++ Q+ E+ R + L + I+ L
Sbjct: 6 QLPLRAAMLMLFSTLSFGMMAITIRYASTQIPTTEIAFFRNAFGLLVLLPLILGPGKPLP 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + +A+ + TP+ + L S++L
Sbjct: 66 RTQHGPRYIARSML-------GLISMLCNFWAISHLPLTQAITLSYSTPLFATILASLWL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++A L +L++ + +A A TI +
Sbjct: 119 HEVVRLRRLLAILAGFAGILVLLQPWSSTFSPALLVALAAALLNAVITIQMKQLSHLDPP 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V+ F+V + + + ++LI G+ + ++ ++ ++ST+
Sbjct: 179 DTVVFYTYAFWVPLSLLLALWQWHWPAGVEWVWLIATGIFGTIGQLLWIRALRLGEVSTL 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + L+ + ++ + +D + I++ A V + + +
Sbjct: 239 QPIGFMQLPLVTLLGWWLFGEHLDRYTALGASIIIGANVYITHREAVLARR 289
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 38/141 (26%)
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
M +PL + + + + +S A +V G
Sbjct: 1 MVTQGQLPLRAAMLMLFSTLSFGMMAITIRYASTQIPTTEIAFFRNAFGLLVLLPLILGP 60
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
L I +L + I L+ + Y+ PL + + L +
Sbjct: 61 GKPLPRTQHGPRYIARSMLGLISMLCNFWAISHLPLTQAITLSYSTPLFATILASLWLHE 120
Query: 281 PIDTVRTIVFGIVVIAMVVYL 301
+ R + ++V L
Sbjct: 121 VVRLRRLLAILAGFAGILVLL 141
>gi|322688470|ref|YP_004208204.1| hypothetical protein BLIF_0279 [Bifidobacterium longum subsp.
infantis 157F]
gi|320459806|dbj|BAJ70426.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 302
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 99/289 (34%), Gaps = 13/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M + +WG + + L ++ +++++ R L + F S
Sbjct: 1 MKRGMAVAGLIVVTAIWGGGFVASDIALNSLTPMQIMAIRFLLGAVLMSFI--------S 52
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + N K +G V L + I L +F + V+ F+ + L
Sbjct: 53 VREFRNINLKEIGAGVLMGIALFAAFALQIIGLQYTTPSKNAFLTALNVVMVPFIAFLVL 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEG 195
++R+ ++ A L ++ + +++L+ + L + A+ + V
Sbjct: 113 RKRVGWRGVLGACLSVVGVAVLSLNGNMTLGLGDALSLLCAVGFAFQIFFTGLFVQRYRA 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + VV G H L + + + + + +
Sbjct: 173 TVLNCVQMVTAFVLSVVAMVAMGQVHLTPTTDGWWSVLYLGVVSTTICYLLQTACQQYID 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ + + S+ +L + + + I+++A+V+ L
Sbjct: 233 ETKAAIILSMESVFGTLFSILLLGEVVTPRMIVGCTIILVAVVISNLAA 281
>gi|229190771|ref|ZP_04317765.1| Uncharacterized transporter [Bacillus cereus ATCC 10876]
gi|228592731|gb|EEK50556.1| Uncharacterized transporter [Bacillus cereus ATCC 10876]
Length = 304
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 91/286 (31%), Gaps = 13/286 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ L VFL E++ I
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILAFVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGVFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTICMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y P+ + L + V I I ++ +V+ +P +
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVSIIGGVITILGIVIAHIPVLRKEK 294
>gi|91975065|ref|YP_567724.1| hypothetical protein RPD_0585 [Rhodopseudomonas palustris BisB5]
gi|91681521|gb|ABE37823.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisB5]
Length = 306
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 81/283 (28%), Gaps = 8/283 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A + + + + V +++ R L + I + L+
Sbjct: 20 GIALMLLAMLAFSFGDAVGKKVVATYPVGQLLLLRAFAGLVVLAPLIWRQRAAFTRLERP 79
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
V + F + + Y + + +VFL E+++
Sbjct: 80 GLQLVRVLISAFEVAAFFLA-------TVYLPLADVITFYLASALFVSVGAAVFLGEKID 132
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q+IA L+ L +LI S + A+ ++ FA +
Sbjct: 133 RPQMIAILIGFLGVLIALQPSPQTMSWPALIAILASILFAALMLITRFLRQTPEIALASQ 192
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
++ + + D ++ G+ ++ + ++ A S V +Y
Sbjct: 193 QFVGTALLGSALMAPSGWITPAPADWIWFALAGVASAAGLLCVNRSLRLAPASVVIPYQY 252
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
T + I +++ A + L
Sbjct: 253 TMIGFAAAFGWLFFGELPTLSTLIGVVVIIGAGLFLALRERKA 295
>gi|323703477|ref|ZP_08115124.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
gi|323531567|gb|EGB21459.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
Length = 308
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 109/297 (36%), Gaps = 12/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + + + + G + ++T+ L Q L + +R+ +++ + G
Sbjct: 6 QPKINPYVVILLGVVGAGFSSIFTK-LAQAPPLIIAFYRLSFTVLLIAAPTYVTGGS--- 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + +LA+H+ +I +L ++ + P+ + G +F +
Sbjct: 62 -ELRNISRRDLKWACLAGILLALHFAVWITSLNYTSIASSTVLVTMQPLFVISGGYLFYR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAV---TWSAYCFARKTIPVGSS 193
E++ L ++ + L + +I+ L+ G L +A + A
Sbjct: 121 EQIGKLGLLGSALALTGSVIIGLNDFRIGGQALYGDILAFAGAIFIAGYVLIGRELRARM 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
V + A+ + N G + + F+ + IF++ +K
Sbjct: 181 SLLPYTFLVYGVAAVALAMLNLALGCAFYPYPPMTWVWFMALAVIPTICGHSIFNWALKY 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
K + V + P+ V + FI ++ ++ I I++ + +++ K
Sbjct: 241 VKAAVVSVSILGEPVGATVLAYFIFREIPSMMQLIGGLIIITGLYIFISSQRQPEPK 297
>gi|218675018|ref|ZP_03524687.1| hypothetical protein RetlG_28105 [Rhizobium etli GR56]
Length = 301
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 91/297 (30%), Gaps = 5/297 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A G L + A + W + +Y++ L V I+ R L+ + ++
Sbjct: 7 TARLAGSEHEKGVLLIVAATLAWSASGVYSRLLTT-DVWTAIAWRSLFGGLFLLIPCLFL 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GG+S + + G FI AL + Y TP I+
Sbjct: 66 EGGISRRQW---RSVFHPSGLAMIACQTFSQGCFIGALYMTTVANVTMIYATTPFIAALF 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G + LKER+ +IA + + + ++ S I + + + + +
Sbjct: 123 GWLILKERVARRTMIAGAVSLFGVGVIV-ASSIGGGTGWGDLLALGMTASFALVIIIPRI 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + F + G L + S +F G KR
Sbjct: 182 DPGVPSLPPTVVSAFLTLAIFAPFGSVGSLDLHNWIVLAAFGATNFSLALVLFLAGAKRM 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ +L + + I++ A+ + ++
Sbjct: 242 PPAEAALIGTMEIVLTPFWVWLLFSEQPPVATYFGGAIILGAVFWHTAVDFNRGRRS 298
>gi|148253366|ref|YP_001237951.1| DMT family permease [Bradyrhizobium sp. BTAi1]
gi|146405539|gb|ABQ34045.1| putative permease of the drug/metabolite transporter (DMT)
superfamily [Bradyrhizobium sp. BTAi1]
Length = 324
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/301 (11%), Positives = 88/301 (29%), Gaps = 16/301 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A + W + +++ V L + R + + F + F+
Sbjct: 19 YVLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGT----FLMLWPFARTHLARDWRT 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ + T AV+ +A+ Q P+ RL+
Sbjct: 75 LLAHWPLLLLLALTGFAVNNALSYWAMQYTQALNGLLIQSSAPLFVALWSLALFGVRLSV 134
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q+ + + +L++ L L+ + + + Y P
Sbjct: 135 GQLTGIAMSLTGVLVILLRGDLGALGAIQFNRGDLMFASALLVFGLYSAVMTRRPAVHQL 194
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + +S G + ++ + F+ GI
Sbjct: 195 SLISCCTAMGAVLLLPLAIWEYSSGSVLTPDLLSIATLGYVVVFASALAYLFFNRGISLI 254
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + PL V ++ +L + + + +V+ ++V + + +
Sbjct: 255 GPNRAAPFLHLVPLFGSVLAIVLLGEELKAFHLAGYALVIGGVIVASRSPLRPARAGDQR 314
Query: 315 K 315
K
Sbjct: 315 K 315
Score = 39.9 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 15/144 (10%), Positives = 43/144 (29%)
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
+ P + L +A + A G + L +
Sbjct: 11 FAWLNNQPYVLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGTFLMLWPFARTHLAR 70
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ L L+ + + + ++ + +++ +APL + + S+ +
Sbjct: 71 DWRTLLAHWPLLLLLALTGFAVNNALSYWAMQYTQALNGLLIQSSAPLFVALWSLALFGV 130
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + + ++V LL
Sbjct: 131 RLSVGQLTGIAMSLTGVLVILLRG 154
>gi|42519700|ref|NP_965630.1| DMT permease [Lactobacillus johnsonii NCC 533]
gi|41583989|gb|AAS09596.1| DMT permease [Lactobacillus johnsonii NCC 533]
Length = 303
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 97/303 (32%), Gaps = 12/303 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 3 KQSKSRLWTILAALAAVMWGISGLFAESLFKVSSKITPIWLTQVRLIISGIVLLIIATVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ ++ + L F+ A+ + + F+ P +
Sbjct: 63 --HQKPFSVLKDKKNTLHIIAYGIFGLLPVQVFYFIAIEMANASIATILQFIGPFFVLTY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTI 188
+V ++ L L ++AA+L + + +++ H PL ++
Sbjct: 121 LAVTHQQVLRKLDVLAAILAFIGVFLLSTHGNFNQLAITPLALFFGLLSAVGEASYTLIP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + + F I +
Sbjct: 181 VKLVKRVSSLVVTGWGMLFAGIGLMIVYPRFPAIPNTPRAWLDVSAIIIIGTIIPFQIMA 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K STV +++ PL V SV I + + + +V+ A++ N
Sbjct: 241 NALRYVKPSTVSLLDAFEPLSATVGSVLIFGLVMSGMDWLGTLLVIGAVLALNFTPKRNI 300
Query: 309 GKN 311
K+
Sbjct: 301 KKS 303
>gi|45358233|ref|NP_987790.1| hypothetical protein MMP0670 [Methanococcus maripaludis S2]
gi|44920990|emb|CAF30226.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 296
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 95/292 (32%), Gaps = 21/292 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L +F I WGI+ + T+ LE + + + RV+ + + F I F+
Sbjct: 2 NDRSLGILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFIRNFTKYSK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
V +++ + ++ F AL S P+ + + +
Sbjct: 62 E--------DFVYIVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVE 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--- 196
K+ + ++ +L+ + + I+ L+ L + + +
Sbjct: 114 KKIPSKIKYFGSLIGLFGVFILILNGKFVLELNPLGDILMFGAVCTWVLYTFVIQKLQKH 173
Query: 197 ---------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ V IP + L L ++ + +
Sbjct: 174 DDLKVTRDITLIGAVFFIPFTIMELGYNGMFEFTILLNPYIAFSLLYLAIFCSAIAYLFW 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I+ A ST Y P++ +++ ILK + I +V+ + +
Sbjct: 234 NMAIRLAGASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYI 285
>gi|170703795|ref|ZP_02894502.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria IOP40-10]
gi|170131298|gb|EDS99918.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria IOP40-10]
Length = 307
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 81/297 (27%), Gaps = 6/297 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + L + A +WG + + L+ + R L + + + +
Sbjct: 5 ARKHLRANLLMLGAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLIPLLTFNTASR 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L + P + + +LAV + L + F V+ V L VF
Sbjct: 65 AQLAAIRRAPALLAPGLALGALLAVSISLQQFGLQYTRIANAGFV-SSLYVVIVPLIGVF 123
Query: 139 LKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ R+ ALL + L ++ A +
Sbjct: 124 VRHRIGAGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHFAKRHD 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + L G L + + + A
Sbjct: 184 PLVLAFLQFVTCGALCLAAGLVIEPVSVAMLRSALPTLLYGGLLSVGVGYTLQVVAQRDA 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ + ++ L + + + +++ ++ L ++ K
Sbjct: 244 APAHAAVIFSMEGVFAAIAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKK 300
>gi|134299364|ref|YP_001112860.1| hypothetical protein Dred_1505 [Desulfotomaculum reducens MI-1]
gi|134052064|gb|ABO50035.1| protein of unknown function DUF6, transmembrane [Desulfotomaculum
reducens MI-1]
Length = 305
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/290 (7%), Positives = 87/290 (30%), Gaps = 18/290 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G ++ A +WG + ++F L+ + ++ R L + + + + L
Sbjct: 2 KEHYVGAFYLSLAASIWGGMYVVSKFALDTIPPFTLLFIRYLIASGLLLAILYFKGAQL- 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + ++PV L
Sbjct: 61 -----IPRQQRNLVFQIGFVGYFLSIAAQFIGTKLSSAHMGAVITTLSPVFLSAFAIPLL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFARKTI 188
KE++ Q+++ + + +L++ G + + + + +
Sbjct: 116 KEKITLKQVVSIAIAFIGVLVVVGMPGSQGPDKTIIGKLFLLEAALFWGYYSVISRKIST 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + + + L + + F ++
Sbjct: 176 IYTPLQITTWGILIATVLTFPCIFFERNIWSFEDLIQLPMVLSILYIAIISTALAFFSWN 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G+ G+ + P++ + + L++ + + +++ +
Sbjct: 236 KGLSMLPSHQAGLFFFFQPVVGTLLGLLFLQEQLSNTFFLGSFFIILGVY 285
>gi|90425572|ref|YP_533942.1| hypothetical protein RPC_4097 [Rhodopseudomonas palustris BisB18]
gi|90107586|gb|ABD89623.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisB18]
Length = 310
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/285 (9%), Positives = 73/285 (25%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + + R W++ + + +
Sbjct: 21 YLLLSLTSLFWAGNAIVGRAAAGHFPPVTLSFLR--WAVAFLLVLPFAWPHLKRDWHEIR 78
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + ++ AL P+ + L RL
Sbjct: 79 RRLGVMIAISVAG--ISTFNTLQYTALEYTTALNALLLQSTAPLFVAIWSLIVLGIRLTL 136
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + L+ +L + ++ LH L+ + + Y + P
Sbjct: 137 AQALGVLVSMLGVAVILLHGDLGQLAHIDLNRGDLIFITAMAIFGLYSALSQKRPAIHGL 196
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F L ++ L + + ++ GI+
Sbjct: 197 SFLAFTFGCGALGLVPLLIVELMLRPPPELTLGNFASLGYVAVFPSILAYLCYNRGIQLI 256
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ L + + +V+ + V
Sbjct: 257 GANRAAPFFHLIPVFGSAMAIGFLGERPQLYHAFGYALVLAGVYV 301
Score = 36.8 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 45/146 (30%)
Query: 159 LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
S P L L++ + A G + A+ L + +
Sbjct: 11 HRFAWLSDQPYLLLSLTSLFWAGNAIVGRAAAGHFPPVTLSFLRWAVAFLLVLPFAWPHL 70
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ + + S + ++ +++ TAPL + + S+ +L
Sbjct: 71 KRDWHEIRRRLGVMIAISVAGISTFNTLQYTALEYTTALNALLLQSTAPLFVAIWSLIVL 130
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + + ++ + V LL
Sbjct: 131 GIRLTLAQALGVLVSMLGVAVILLHG 156
>gi|126726146|ref|ZP_01741988.1| hypothetical protein RB2150_08058 [Rhodobacterales bacterium
HTCC2150]
gi|126705350|gb|EBA04441.1| hypothetical protein RB2150_08058 [Rhodobacterales bacterium
HTCC2150]
Length = 298
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 92/292 (31%), Gaps = 5/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G + + I++ + ++ L + +V V+ R + V GGL
Sbjct: 3 QNNVRLGIILMIATTIIFAVQDGLSKHLAQEYNVFMVVMIRYWFFGLFVVTLAARSQGGL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ T + +F +L + A + + + P+I L
Sbjct: 63 KVAIQTK----QPILQIFRGLLLIAEICILVSAFIVIGLVESHAIFAAYPLIVAALSGPI 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L E++ + IA + + +LI+ AI S FA ++
Sbjct: 119 LGEKVGWRRWIAIGVGFIGVLIILRPGFAVFSPFAIVPIISCTMFALYSLLTRYVARKDS 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ G ++ + D ++ G + ++ A+ S
Sbjct: 179 AATSFFYTGFVGAIGMTAVGIWYWEPMSATDWAYMAGLCITGVSGHFCLIKCLEVAEASA 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
V Y + + + + + ++ I IV+ A + + + S K
Sbjct: 239 VQPFAYLQLVFAALIGITVFSEVLELHVAIGSAIVMTAGIFTVWREHVKSKK 290
>gi|114777234|ref|ZP_01452245.1| hypothetical protein SPV1_09213 [Mariprofundus ferrooxydans PV-1]
gi|114552379|gb|EAU54862.1| hypothetical protein SPV1_09213 [Mariprofundus ferrooxydans PV-1]
Length = 308
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 93/295 (31%), Gaps = 15/295 (5%)
Query: 16 KENASLPTMM-GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIV 72
N S P+++ G L A + + I ++ + V + ++ R+ ++LP +
Sbjct: 10 NNNYSDPSLIPGLLLAVGAALGFSIKAIFVKLAYNYDVDAITLLLFRMAFALPFFVVIAI 69
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L + + + + + + L L F+ P I V
Sbjct: 70 ---REEHLATEPVGLRNLLMIALLGLIGYYLSSLLDFTGLQYITAGLERLILFIYPTIVV 126
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI---------PLLSLAIAVTWSAYCF 183
+ ++ +R+ +IA LL + H LL A V++S +
Sbjct: 127 IISTLCFGKRITREAVIALLLSYTGIAFAMYHDLQLSGESTVPGSLLIFAATVSYSLFLV 186
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ F ++ ++ + L
Sbjct: 187 GSGEMIPRVGARRFTAYAMIVSCLAVFLQFALLRDVSDLRQPLPVYGYGLAMALFSTVIP 246
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + I+R T ++ P+ I + +L +P+ ++ + V+ ++
Sbjct: 247 AFLLASAIQRIGAGTTSVIGALGPVATIAMAALVLNEPLSWMQVVGALFVITGIM 301
>gi|91780042|ref|YP_555250.1| RarD protein [Burkholderia xenovorans LB400]
gi|91692702|gb|ABE35900.1| RarD protein [Burkholderia xenovorans LB400]
Length = 298
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 52/289 (17%), Positives = 107/289 (37%), Gaps = 4/289 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSL 80
G A ++ + Y L +S L++ + R++W++PG I L
Sbjct: 7 KRGIALSVGASAMFALLSAYATLLAPLSGLDIFAWRIVWTVPGALLLIALRKRLPILRQL 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + P + SA +L F++A L + S YF+ P++ V +G +
Sbjct: 67 LYRMVTEPTLGAAMTVSAALLGAQLWVFLWAPLHGRMLEVSLGYFLLPLVMVLVGRFYYH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ LQ +A + +G + V + + +
Sbjct: 127 ERLDGLQWLAVACAAAGVGHELWMTG-AFSWPTLLVALGYPPYFVLRRKINQDSLAMFTV 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + + V+ G L L G G L++ + + ++ G
Sbjct: 186 EMMLLLPVAIVMALGSDSLALIAGRADMWCLLLPGLGALSTIALASYLKASRLLPVALFG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ Y P+L+++ S+ +L + + + + + IA+ + L V
Sbjct: 246 ILGYVEPVLLVLVSITLLGETLGAAQLATYIPIWIAVALTALHGVRLVR 294
>gi|237744105|ref|ZP_04574586.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|229431334|gb|EEO41546.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
Length = 286
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 96/283 (33%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R S + + + +
Sbjct: 3 SDKTKGVFWMLISVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSFILSAYILYRQKESIKV 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + V YAL + ++PV +FLK
Sbjct: 63 AKE------NIPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLK 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q+I +L++++++ + S P + ++ +SA + G
Sbjct: 117 EKVDKKQVIGIILMLMAVVFVIKPSFSPEVIPSLVGLFSAILAGFSYTIIRYLHGKVKSE 176
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L + + ++G G+ + +Y A S V
Sbjct: 177 INVFYFSLLSVICTFPLMMMNFVKPNLFEVFMLIVGIGVSAAMGQFGLTYAYTFAPASEV 236
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYL 301
I Y + ++ + D I I++ A+ +YL
Sbjct: 237 SIYNYVIIITSMLMDYILFSTIPDLFSFIGGFIIITTAIYLYL 279
Score = 35.7 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 33/76 (43%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
F+ G Y ++ ++ ++ +P+ + + + LK+ +D + I
Sbjct: 67 IPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLKEKVDKKQVIG 126
Query: 290 FGIVVIAMVVYLLPTV 305
++++A+V + P+
Sbjct: 127 IILMLMAVVFVIKPSF 142
>gi|309389507|gb|ADO77387.1| protein of unknown function DUF6 transmembrane [Halanaerobium
praevalens DSM 2228]
Length = 299
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 90/294 (30%), Gaps = 15/294 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + + + L + L +R+L+S+ + + +
Sbjct: 8 YILLTIGLFFLSLAGILIK-LAEAPPLITAFYRMLFSVLILTPFFLLKYRSKIRYFLDYR 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V +LA+H+ +I ++ + + P+ ++ L F +E L
Sbjct: 67 -------PVVVGFLLAIHFILWISSIQYTDISNSVIFVALQPLFTIILEYFFAREDLQKG 119
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+I ++ +L +I+++ L + + G ++
Sbjct: 120 AVIGIIMAVLGSVIISIGDFYQLGDKLFGNFLALSAAFFAAAYLFIGRGVRKKLDYFPYL 179
Query: 207 ALFYVVWNGF-------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ Y F G +FL I +Y ++ S V
Sbjct: 180 YILYSYATVFLGIGAYLFKIPFTGYGVKNYFIFLALALGPTLVGHSILNYSVRFLSTSVV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P++ + +LK+ + + ++ + + + K+K
Sbjct: 240 SLFVLGEPIITTTLAWLLLKEEVMLTTILGGVFILGGIYLASVYNYHQQQKDKK 293
>gi|258543054|ref|YP_003188487.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-01]
gi|256634132|dbj|BAI00108.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-01]
gi|256637192|dbj|BAI03161.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-03]
gi|256640244|dbj|BAI06206.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-07]
gi|256643301|dbj|BAI09256.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-22]
gi|256646356|dbj|BAI12304.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-26]
gi|256649409|dbj|BAI15350.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-32]
gi|256652395|dbj|BAI18329.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655453|dbj|BAI21380.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-12]
Length = 312
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 96/295 (32%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P G L + + I+ +++ L ++ EV S +V F
Sbjct: 4 SPPTKGLLLSLLGFAAFSISDAFSKLLTGRLNPFEVAF-----SGGFFGLLLVPFVKTRG 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + GM A + + + + F+ P I+ L V L
Sbjct: 59 QSWLNILPIQKPGMWWIRAVATFIATAASVESFMLLSMPEALSLMFLMPFIATILSVVAL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI-PVGSSEGFFI 198
KE+++ +A + +LI+ PL +A A I + G
Sbjct: 119 KEKVSPWGWVAVAIGFAGVLIVLRPGVRPLHFGHACALAAAIASAVNVIAYRVAGTGTTK 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + A + + + + D L GYG L + + S
Sbjct: 179 LGVLGSSLAGPLLGDGLLALPNFTWPDTVADWGNLFGYGFLAALGQLLIMLAATLTPASR 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V + +YT + ++ S + +P+D I +V ++ ++ + K +
Sbjct: 239 VALPQYTQMVWAVLFSYTLFHEPLDKWTIIGVTVVTLSGMLDWFRKHLLILKQRR 293
>gi|242399740|ref|YP_002995165.1| Permease, drug/metabolite transporter (DMT) superfamily
[Thermococcus sibiricus MM 739]
gi|242266134|gb|ACS90816.1| Permease, drug/metabolite transporter (DMT) superfamily
[Thermococcus sibiricus MM 739]
Length = 285
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 110/281 (39%), Gaps = 7/281 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G + + + ++WG ++ ++ + L + +RVL + F + K
Sbjct: 2 LQGRVKIILSMLIWGSVGIFARY-SGLDGLRLAFYRVLLGSLVLIFVHSLKDIMWAK-KA 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L + +L F +LA++W FF A++ + Y++ P++ V L SVFL+ER+
Sbjct: 60 FLAVRHKLLLLCFLGLVLALNWVFFFSAVIYTDIAKATLIYYLAPILVVVLSSVFLRERI 119
Query: 144 NHLQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ L L LI+ L + A+ + + + + +
Sbjct: 120 TRKRLFLVFLAFLGALIIGTQAEFSLGNRDFLGVVFALLGAIFYASVTVLGRYLKDVDST 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + +++ G F + + + LI I+ G+K + +
Sbjct: 180 YLTFFQLLFATLILFPVLVGVGTFHVTSSSLAIILIIAIFHTVVALFIYMDGLKEVEANE 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ Y PL IV + + + I ++++A ++
Sbjct: 240 AAILSYLDPLSAIVYAAILFGEIPTFKTVIGGSLILVASLL 280
>gi|221195301|ref|ZP_03568357.1| integral membrane protein DUF6 [Atopobium rimae ATCC 49626]
gi|221185204|gb|EEE17595.1| integral membrane protein DUF6 [Atopobium rimae ATCC 49626]
Length = 301
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 89/276 (32%), Gaps = 12/276 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A ++ G + ++ + +++ R++ + ++ +
Sbjct: 3 LVALLICGSNGIVASYI-NLPSYQIVFFRMMLGALFLGVLLLIT----HSKPSCTDHVSQ 57
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ L+FS L + W A + + Y+ P+I + L + ERL ++
Sbjct: 58 IKYLIFSGLALGLQWSLLFEAYRQVGVGVATLEYYCGPIIVMALSPILFHERLTWQKVSG 117
Query: 151 ALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+++++ + ++ + + LS +G L I
Sbjct: 118 LVVVMVGMGLIVGYGVGEKLSLAGLSFGAIAAVLYAAMIISNRYAPDIKGIESTTIQLGI 177
Query: 206 PALFYVVWNGFSGGEHFFL--GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
ALF + G ++ ++ ++ + + + V +
Sbjct: 178 GALFVGLLTLVLHGIELPPDGSSVNWGALVLLGLFNTGVGGGLYFPQLTKIPVQRVAVFG 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL ++ S +L + + ++ ++ +
Sbjct: 238 YLEPLSAVIFSAILLGEQLGPLKIAGACCIIGGAIF 273
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 43/116 (37%)
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + I + + ALF V + + ++ +LI GL + +
Sbjct: 18 YINLPSYQIVFFRMMLGALFLGVLLLITHSKPSCTDHVSQIKYLIFSGLALGLQWSLLFE 77
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ + + Y P++++ S + + + + +V++ M + + V
Sbjct: 78 AYRQVGVGVATLEYYCGPIIVMALSPILFHERLTWQKVSGLVVVMVGMGLIVGYGV 133
>gi|171320766|ref|ZP_02909775.1| RarD protein, DMT superfamily transporter [Burkholderia ambifaria
MEX-5]
gi|171093983|gb|EDT39094.1| RarD protein, DMT superfamily transporter [Burkholderia ambifaria
MEX-5]
Length = 299
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/294 (17%), Positives = 114/294 (38%), Gaps = 6/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G + A L+ + Y + L ++ L++ + R++W+ PG I +L+
Sbjct: 9 RGIMLSVLASTLFALMSAYAKLLAPLTGLDIFAWRIVWTAPGALALIALRGRWPALVELV 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +++N + + L SA +L + F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSVRNRRLLIALPASAALLGLQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L ++ + + F + S F
Sbjct: 129 RLDPLQWAAVAFAALGVVHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAVEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + + + L G G+L++ + + ++ GI
Sbjct: 189 VLL---CPVALAMVSTSPTPVASHPLLWAALLPGLGVLSTVALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ Y P+L++ S+ +L + + + + + +A+ + + + + ++
Sbjct: 246 LGYVEPVLLVAVSLLLLGETLSVAQLATYAPIWVAVALTAWHSTMLMRRLPARR 299
>gi|313497697|gb|ADR59063.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 296
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 88/295 (29%), Gaps = 8/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + + +G+T ++ + S ++ R +++ + G
Sbjct: 1 MNHRTALGALHIGALFFGLTGVFGKLATSASPAIIVFGRAAFAVLALALFASLAGPGWQR 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +G ++ + ++ A+ + + + P +V L S+ +
Sbjct: 61 LSSQDARRLLLGGVLLAGHWVSF-----FIAVKVGGVAIATLGFASFPAFTVILESLLFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER++ + + +L+ + L+++T L A+ S
Sbjct: 116 ERIHRNEAVLVVLVSIGLILVTPAFDLASEATGGLLWALLSGLLFSLLSLTNRAGSGRLP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F+ + + +F + K
Sbjct: 176 AVQAALWQNLVVGLCLLPFAAPGLTDVAAPDWLWIALLGIFCTGVAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T ++ P+ I + + + + +++ A+V+ + +
Sbjct: 236 TAAVVFGMEPVYGIAVAWAVFAETPTVRMLLGGALIIFAIVLSSRLAAEQPPRQR 290
>gi|239834172|ref|ZP_04682500.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822235|gb|EEQ93804.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 313
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 10/305 (3%)
Query: 2 GKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVL 61
G ++ K + S + + I G +P++ + L +V L R+
Sbjct: 8 GANSSLKMSHTTAASPAPSNAQRVAMTALIVGGIAIGSSPIFVR-LSEVGPLATGFWRLA 66
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
++ + F P L +A G + +L +
Sbjct: 67 LAVLPLLFM--DGRERRDEKDAAPLTPTDCLRLALPGLFIAFDLGAWHLSLHMTSVANAT 124
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAI 174
+ P+ + K R++ +I + ++ ++++ G L +
Sbjct: 125 LLANMAPIFVTLGAWLLFKSRVSTSFMIGLAVAVIGVIVLKGGPGELLQSRSSGDAMALL 184
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
A + A I + AI A+F + F G+ +
Sbjct: 185 AAVFYAGYILSVGRLRSRFSTMRIMLWSSAIAAVFSLPIAYFMEGQILPATLYGWLILAG 244
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ ++ + +Y + S + P++ + IL +PI ++ + IV+
Sbjct: 245 LAWVTHAAGQSMIAYALAYLPASFSSLTLLLQPVVAAFLAWTILSEPIGMLQALGGIIVI 304
Query: 295 IAMVV 299
+++
Sbjct: 305 SGILI 309
>gi|114769313|ref|ZP_01446939.1| Putative transporter, RhaT family, DMT superfamily protein [alpha
proteobacterium HTCC2255]
gi|114550230|gb|EAU53111.1| Putative transporter, RhaT family, DMT superfamily protein [alpha
proteobacterium HTCC2255]
Length = 315
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 101/287 (35%), Gaps = 7/287 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ L+ A+ ++ ++ + L + S +++ VL+ +P V ++ S
Sbjct: 1 MKKSNIKAALYSLTAFAIYATHDVFVKILGAEYSAFQIVFFNVLFGMPLVALIMIQDSRP 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+LL + +LA Y+ F P++ L
Sbjct: 61 GTLLPVHPIWSGIRTIATMMTGLLA------FYSFSVLPLAQVYSILFAMPLLITVLAIP 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ + +A L ++ +LI+ + L +A +A+ A ++ +
Sbjct: 115 ILGEKVGFHRWVAVLTGLIGVLIVLRPDDVQLGIGHLAALGAAFSGATASVIMRKIGKDE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ P L GF+ ++ I D +L + + +
Sbjct: 175 RLVVLMIYPMLITFFIMGFALQFNYRPMPIEDMRISFLIAILGLVATLFVIASYREGEAA 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
V M+Y+ + + F+ + I + I++++ + ++
Sbjct: 235 IVAPMQYSQIIWASIFGYFLFDEKISSSVIAGATIIILSGLYIVVRE 281
>gi|256028075|ref|ZP_05441909.1| transporter [Fusobacterium sp. D11]
gi|289766020|ref|ZP_06525398.1| transporter [Fusobacterium sp. D11]
gi|289717575|gb|EFD81587.1| transporter [Fusobacterium sp. D11]
Length = 287
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 96/283 (33%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R S + + + +
Sbjct: 4 SDKTKGIFWMLVSVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSFILSAYILYRQKESIKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + V YAL + ++PV +FLK
Sbjct: 64 AKE------NIPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q+I +L++++++ + S P + ++ +SA + G
Sbjct: 118 EKVDKKQVIGIILMLMAVVFVIKPSFSPEVIPSLVGLFSAILAGFSYTIIRYLHGKVKSE 177
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L + + ++G G+ + +Y A S V
Sbjct: 178 INVFYFSLLSVICTFPLMMMNFVKPSLFEVFMLVVGIGVSAAMGQFGLTYAYTFAPASEV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYL 301
I Y + ++ + D I I++ A+ +YL
Sbjct: 238 SIYNYVIIITSMIMDYILFSTIPDLFSFIGGFIIITTAIYLYL 280
Score = 35.7 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 33/76 (43%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
F+ G Y ++ ++ ++ +P+ + + + LK+ +D + I
Sbjct: 68 IPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLKEKVDKKQVIG 127
Query: 290 FGIVVIAMVVYLLPTV 305
++++A+V + P+
Sbjct: 128 IILMLMAVVFVIKPSF 143
>gi|225571485|ref|ZP_03780481.1| hypothetical protein CLOHYLEM_07583 [Clostridium hylemonae DSM
15053]
gi|225159961|gb|EEG72580.1| hypothetical protein CLOHYLEM_07583 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 92/292 (31%), Gaps = 14/292 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + +++G + + + + E+ R + + + A + +
Sbjct: 11 IILSMVIFGTIGAFVKNI-PLPSAEIALWRAVTAFLMLTGAAAAGGRLKQIRAVKGRILI 69
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+G S LA +W A +++ Y+ P + V + +E+L Q +
Sbjct: 70 LLG----SGAALAFNWILLFEAYRYTSVAVSTLCYYFAPTLIVLSSVLIFREKLKVRQAV 125
Query: 150 AALLIILSLLIMTLHSGIPLLS-----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L+++ SG + +G +G
Sbjct: 126 CFAASTAGLVLVIGVSGGGSNDTAGALYGLGAAVCYAGVVFFNKTLGDIDGLVRTWLQFG 185
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + F+ G L L LI + +C++ + K I+
Sbjct: 186 AAMLIMFPYVIFTCGFAVTGLDAKGTVLLLIVGVVHTGITYCMYFASLTGLKGQQAAILS 245
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y P++ I+ S +L + + + +++ L V + K K+
Sbjct: 246 YIDPMVAILVSFIVLGETVTVPQIAGGAMIIG---FAFLNEVKGRSRRKAKE 294
>gi|298383474|ref|ZP_06993035.1| integral membrane protein [Bacteroides sp. 1_1_14]
gi|298263078|gb|EFI05941.1| integral membrane protein [Bacteroides sp. 1_1_14]
Length = 303
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 98/298 (32%), Gaps = 15/298 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A +G+ PL+ + +SV V+ +R +++ + +
Sbjct: 2 NNKTKGFIYGAIAAASYGMNPLFALPLYAAGMSVDTVLFYRYAFAVIVLGVLMKLQGQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K + + + + + + S FV PV+ + VF
Sbjct: 62 TLRKADILPLVIM------GLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVAVIMGVF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
KE+++ + I + LL + + ++ G + L +++++ Y +
Sbjct: 116 FKEKISAITIFSILLALSGIALLYQGDGNKPLSTAGIIFVLLSSLSYAIYIVGVNRSSLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y+V F + L L + + I
Sbjct: 176 TLPTTKLTFYAILFGLSVYIVRLNFCTELQIIPSPLLWADVLALAILPTAVSLICTALAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ P+ + V + + + + +++ A+ + ++ +
Sbjct: 236 HYIGSTPTAILGALEPVTALFFGVLLFHEKLTPRLMVGILMIITAVTLIIIGRSLIKK 293
>gi|257468431|ref|ZP_05632525.1| integral membrane protein [Fusobacterium ulcerans ATCC 49185]
gi|317062697|ref|ZP_07927182.1| EamA family protein [Fusobacterium ulcerans ATCC 49185]
gi|313688373|gb|EFS25208.1| EamA family protein [Fusobacterium ulcerans ATCC 49185]
Length = 289
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 101/278 (36%), Gaps = 14/278 (5%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A +++G L+ + + ++ E+ R + + + +S
Sbjct: 8 VSAMLIFGTIGLFVKNI-DLTSSEIALVRGVIGGIVLVVVSLLIKNKVSFKDV----KAN 62
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S + ++W F A + SY+ PV + L LKE+L +I+
Sbjct: 63 LLLLLLSGGAIGLNWIFLFQAYKYTTISNATLSYYFAPVFVMLLSPFILKEKLTLKKILC 122
Query: 151 ALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+L ++ + +SG +S +A + + +
Sbjct: 123 VACAMLGMMCIVGNSGGATEGRNDFLGISYGLAAAAFYASVVLMNKFLKNLKSLETTYIQ 182
Query: 203 LAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + A+ + + G F + LI + + ++ +K K T+ +
Sbjct: 183 LILAAVVLMPYVFTVEGFNIFRMPASSIPYILILGVVHTGLAYLLYFSSLKELKGQTIAV 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
M Y P+ ++ S L++ + ++ +++ + ++
Sbjct: 243 MSYIDPISAVIISAIFLRERMGLLQIAGGVLILGSTLI 280
>gi|237709991|ref|ZP_04540472.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237725344|ref|ZP_04555825.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265753642|ref|ZP_06088997.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229436031|gb|EEO46108.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229456084|gb|EEO61805.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263235356|gb|EEZ20880.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 304
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 92/298 (30%), Gaps = 15/298 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G L A +G+ PL+T L +SV V+ +R ++ + +
Sbjct: 3 NNKTKGFLLGAIAAASYGMNPLFTLPLYSAGMSVDSVLFYRYALAIVVLGIMMKMQKQSF 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ K + + + + F + + S FV PV+ + +V
Sbjct: 63 AIKKADVLPLCIM------GLLFSFSSLFLFMSYNYMDAGIASTILFVYPVLVAIIMAVV 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIPVG 191
KE+++ + + + L + + ++ G ++ ++ Y +
Sbjct: 117 FKEKVSPVTMFSIALAFVGISLLCKSPGGQTLSLVGITFVFLSSLAYAIYIVGVNRSSLK 176
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ VL YVV F G + + + I
Sbjct: 177 DMPIAKLTFYVLLFGLSVYVVRLKFCTGLQLIPTPLLWVNAISLAVFPTVISLVTMTKAI 236
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ P+ + V I + + + +V+ A+ + + +
Sbjct: 237 HYIGSTPTAILGALEPVTALFFGVLIFGEQLTPRIILGILMVITAVTLIIGGKTLLKK 294
>gi|229178956|ref|ZP_04306314.1| Uncharacterized transporter [Bacillus cereus 172560W]
gi|228604513|gb|EEK61976.1| Uncharacterized transporter [Bacillus cereus 172560W]
Length = 304
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 90/286 (31%), Gaps = 13/286 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+F A ++ Y T S VTP+++ L VFL E++ I
Sbjct: 72 ---FFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILSFVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTICMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y P+ + L + V I I ++ +V+ +P +
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVSIIGGVITILGIVIAHIPVLRKEK 294
>gi|160872390|ref|ZP_02062522.1| transporter, dme family [Rickettsiella grylli]
gi|159121189|gb|EDP46527.1| transporter, dme family [Rickettsiella grylli]
Length = 300
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/288 (10%), Positives = 90/288 (31%), Gaps = 9/288 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L++ + G P++ + L +V + RV + P + +
Sbjct: 10 SEKKHKRALLYLVIGAVAIGFAPIFVR-LSEVDPIATGFWRVAIAFPILTLLSLGQGYTR 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L+ + + ++ +S +P++ G +
Sbjct: 69 PDDRHKPILKDYLWLLLC-GVLFGGDLSTWHLSIQYTTIANSSLIVNFSPILIALWGWIV 127
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-------TWSAYCFARKTIPVG 191
LK+ I+ LL +L ++I+ + ++ + + A
Sbjct: 128 LKKPPQKKLIVGLLLALLGIVILIQPTVPMDKTIRVGDGLAFITAFFYAGYLLVLNHARK 187
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F L + + + + + L + + +Y +
Sbjct: 188 KFTAFTSMAISTFSSMLTLLFISCITHELTLPETPMAWIILLALALFAHVLGQGLIAYAL 247
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ I P++ ++ F K+ ++ ++ I I ++ + +
Sbjct: 248 PYLPVTFSSIALLIQPMVAAIAGFFFFKETLNVIQIIGIFIALVGIFL 295
>gi|153010306|ref|YP_001371520.1| hypothetical protein Oant_2983 [Ochrobactrum anthropi ATCC 49188]
gi|151562194|gb|ABS15691.1| protein of unknown function DUF6 transmembrane [Ochrobactrum
anthropi ATCC 49188]
Length = 313
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 84/294 (28%), Gaps = 6/294 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A G LF A ++ +++L S + + R V + G
Sbjct: 20 AMTRKGQGYLFTLLAVTIFATQDGISKYLGTHYSPILITMIRYWVFAAFVLLLAIRSGGI 79
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ VF +LA FI+AL + P++ L
Sbjct: 80 AKAAATK-----RPFLQVFRGILLAAEIVTFIFALSRAGMATAQSIFQGAPLLVTMLSVP 134
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E++ + A ++ ++ +L++ + + + FA + +
Sbjct: 135 FLGEKVGWRRWTAIIVGLIGVLLIINPVNATFDASLLLPVAAMVMFAVYAVATRAVSKSD 194
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M + V F G + D ++ +
Sbjct: 195 DAMTSFFYTGIAGAVALTFVGSFYLMPIARSDWFWMAALCACGIASHYFLIRAYNILEAG 254
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V + Y ++ +V + + + IVV A + + +N
Sbjct: 255 EVQPLTYLQLVIGACIAVTVFHEQLTWNIIAGAVIVVSAGLFSVFRERQLGKRN 308
>gi|34762238|ref|ZP_00143244.1| Transporter, Drug/Metabolite Exporter family [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27888096|gb|EAA25156.1| Transporter, Drug/Metabolite Exporter family [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 287
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 93/288 (32%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R S + + + +
Sbjct: 4 SNKTRGVFWMLVSVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSFITSAYILYRQKESIKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + V YAL + ++PV +FLK
Sbjct: 64 AKE------NIPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q+I +L++++++ + S P + ++ +SA + G
Sbjct: 118 EKVDKKQVIGIILMLMAVVFVIKPSFSPEVIPSLVGLFSAILAGFSYTIIRYLHGKVKSE 177
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L V + ++G G+ + +Y A S V
Sbjct: 178 INVFYFSLLSVVCTFPLMMMNFIKPNLFEVFMLIVGIGVSAAMGQFGLTYAYTFAPASEV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + ++ + D I I++ + L
Sbjct: 238 SIYNYVIIITSMLMDYILFSTIPDLFSFIGGFIIITTSIYLYLHNKKK 285
>gi|313157785|gb|EFR57196.1| putative membrane protein [Alistipes sp. HGB5]
Length = 294
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 95/292 (32%), Gaps = 5/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L+ + +G+ PL+T S E +S+R + + V+
Sbjct: 1 MERAQGILYAALSSSTFGLAPLFTLLLLAGGYSPFEALSYRWGVAALFLGVLAVFSGRSF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATI--LAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + L + + + ++ + + T GS
Sbjct: 61 RLGRRELVTVFLLSLFRAATSLSLIIAYQHIASGVASTIHFMYPLAVALAMMCFFREKGS 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-AVTWSAYCFARKTIPVGSSEG 195
++ + + A LL + ++ +S + ++S + ++ Y + +
Sbjct: 121 AWVFAAIGMSVVGAVLLSLGNVDFTVENSALGMVSACVSVFSYGGYIVGVRKSRAVEIDS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V+ + AL++++ +GG + L + IKR
Sbjct: 181 AVLTCYVMGLGALYFILGGLLTGGVRIETDGMTWLCILGLALPATALSNMTLVQAIKRIG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I PL +V V + +P ++V A+ V +L T
Sbjct: 241 PTLTSIFGALEPLTAVVIGVAVFGEPFTAQGAAGILLIVAAVSVVVLRTGRR 292
>gi|222149167|ref|YP_002550124.1| permease [Agrobacterium vitis S4]
gi|221736152|gb|ACM37115.1| permease [Agrobacterium vitis S4]
Length = 342
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/314 (10%), Positives = 103/314 (32%), Gaps = 16/314 (5%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLP 65
+ S S+ G + + ++ + ++++ Q + E+ R + +
Sbjct: 24 PRATSGTSSQATVFSGVTFGLGMMVLSVLITPLVDVFSKLATQTMPAAEISLARFFFQIL 83
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ ++ L + + + +L + F+ AL T + +F
Sbjct: 84 FMLPVLIIRRTWPKLSWSNTR------LHMVRGGVLCLSMLTFVTALRTMEVADAVAIFF 137
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAV 176
V P+I L + LKE++ + +A + +++ S + + IA+
Sbjct: 138 VEPIILTILSGIILKEKIGWQRYLACGTGFIGAMLVVQPSFQEVGAVAFLPIITAFCIAI 197
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
+ + ++ + + ++ T++L+
Sbjct: 198 FAILTRLLSRHQDPFVMQVETGCWAMVFCTIMIAIGQTMNLTMFDLVQPDLTGTIWLVCT 257
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
G + + + + A S + ++Y + + + D ++ + I++ +
Sbjct: 258 GATAAVGGVLGVFAYRAAPPSMLAPLQYLEIVTATLFGWLVFHDLPDALKWLGIAIIIGS 317
Query: 297 MVVYLLPTVINSGK 310
+ + ++ +
Sbjct: 318 GLTIIWRERKHASR 331
>gi|19703737|ref|NP_603299.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296327961|ref|ZP_06870496.1| DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|19713869|gb|AAL94598.1| Transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296154917|gb|EFG95699.1| DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 286
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 95/283 (33%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R S + + + +
Sbjct: 4 SDKTKGIFWMLVSVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSFITSAYILYRKKESIKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + + + V YAL + ++PV +FLK
Sbjct: 64 AKQ------NIPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q+I +L++++++ + S P + ++ +SA + G
Sbjct: 118 EKVDKKQVIGIILMLIAVVFVIKPSFSPEVIPSLVGLFSAILAGFSYTIIRYLYGKVKAE 177
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L + + ++G G+ + +Y A S V
Sbjct: 178 INVFYFSLLSVICTFPLMMLNFIKPNLFETFMLIVGIGVSAAMGQFGLTYAYTFAPASEV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYL 301
I Y + ++ + D I I++ A+ +YL
Sbjct: 238 SIYNYVIIITSMLMDYILFSTIPDLFSFIGGFIIMATAIYLYL 280
Score = 36.8 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 33/76 (43%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
F+ G Y ++ ++ ++ +P+ + + + LK+ +D + I
Sbjct: 68 IPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLKEKVDKKQVIG 127
Query: 290 FGIVVIAMVVYLLPTV 305
+++IA+V + P+
Sbjct: 128 IILMLIAVVFVIKPSF 143
>gi|227819332|ref|YP_002823303.1| permease [Sinorhizobium fredii NGR234]
gi|227338331|gb|ACP22550.1| permease [Sinorhizobium fredii NGR234]
Length = 302
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 8/299 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ AS G L + +++ + + ++L SV +V+ R L + + +
Sbjct: 8 ATSAASNAARTGVLVMLLGMLMFSLNDVMGKWLVATYSVGQVVLIRSLAAAILLVPFLWL 67
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + G+ + F +A++ + P+
Sbjct: 68 NGPKKLLA------LERPGLQLARVAASTAEVFAFYFAVVYLPLADVMTYWLAAPIYVAA 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ LKE + + A + + +LI S A+ + CFA + S
Sbjct: 122 ASPLLLKEHVGWRRWTAIAIGFVGVLIALEPSSEAFTLPALISILGSMCFAIMMVSGRSL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G + + DT L G++ + + +K
Sbjct: 182 RGTPDTTLAFWQLVGAAL-VGLLWAPFDWTPPKPLDTALLCLLGVVAMIAHVLVNRALKL 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A +TV ++YT I+ I + G++V + + + +
Sbjct: 241 ADAATVAPLQYTLLFWAIIFGWLIFGDTPRLSMVLGAGLIVASGLFIFFREQQLKRQGR 299
>gi|171317603|ref|ZP_02906790.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria MEX-5]
gi|171097231|gb|EDT42079.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria MEX-5]
Length = 319
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 86/290 (29%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P ++ +
Sbjct: 2 KTRLIGYLYLAAAMAGVGSTVIASRLAAGGLPPFAATALRFLIATPLLYALMRAQRMRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + AV ++V +A + I P +S + ++ L
Sbjct: 62 RI----RTRDAVLLIVQAAAGGVGYTVLLISGTKLSSPIDAGVMLGTLPAMSTLIAALVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
+ER AA L +L +T G + SL AV A
Sbjct: 118 RERQTPRDWSAAALATAGVLFVTFAPGQAMPSLRTLAGDALVLAAVACEAVFILLNRRLS 177
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L V + + + +
Sbjct: 178 APLPPLALSTAMSGLGFMLALVPAAFEWHALATGWTVGAISAIAYYALVPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + R + +VV M+V
Sbjct: 238 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLGGTRLLGIALVVTGMLV 287
>gi|237737870|ref|ZP_04568351.1| EamA family protein [Fusobacterium mortiferum ATCC 9817]
gi|229419750|gb|EEO34797.1| EamA family protein [Fusobacterium mortiferum ATCC 9817]
Length = 285
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 101/276 (36%), Gaps = 12/276 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A +++G L+ + +E +S E+ R + A ++ +S
Sbjct: 8 ITAMLIFGTIGLFVKNIE-LSSSEIALTRGFIGGVTLILATIFLKKKISF----EAIKNN 62
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+FS + ++W F + SY+ PV L LKE+L + +
Sbjct: 63 LYLLIFSGLAVGLNWIFLFQGYKYTSISNATLSYYFAPVFVTILAPFILKEKLTLSKFLC 122
Query: 151 ALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L+ ++ + + GI ++ +A + A G + ++
Sbjct: 123 VLMALVGMFCIVGVDGINGGSDLIGIVYGLLAAGFYASVILMNKFLKGIDSIEITVIQLI 182
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ G + ++ LI + + ++ ++ K T+ ++
Sbjct: 183 SATITLLPYVLYVEGFGILSVSSVSIPYILILGIVHTGIAYLLYFSSLQGLKGQTIAVLS 242
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P+ I+ S ILK+ + ++ I +++ + +
Sbjct: 243 YIDPVFAIIISAVILKEQLGFLQIIGGVLILGSSFL 278
>gi|163742049|ref|ZP_02149438.1| integral membrane protein [Phaeobacter gallaeciensis 2.10]
gi|161384770|gb|EDQ09150.1| integral membrane protein [Phaeobacter gallaeciensis 2.10]
Length = 321
Score = 77.3 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 108/311 (34%), Gaps = 26/311 (8%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
++++ A LP ++G L A I + I + +FL + +V+ R + ++ + I+
Sbjct: 1 MTQQQAGLP-ILGVLAAVGAAICFSIIDVIFKFLSGDYPLYQVVMLRSVVAMVVLLALII 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
GG +L+ + + + + F L F TP++
Sbjct: 60 PLEGGYGILRTRQPR-----LHLLRSLAVLFANLCFFTGLAIMPMAEAVAIAFATPLVVT 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L +FLKER+ + +A + +LI+ AI A +A +
Sbjct: 115 SLSVLFLKERVGPWRWMAVAIGFTGILIIMRPGPGTFQPAAILPFLGACGYATLHVLTRR 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGF-------------------SGGEHFFLGNIPDTLFL 233
+ G + P L +++ + + D +
Sbjct: 175 AGGADKAATLSFYPTLGFLLVSTLVGLTTGDGRFAGSDNAGLQFILRAWIWPEPQDWILF 234
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ GL S + S ++ + V EY A + ++ + + + D I ++
Sbjct: 235 LTVGLAGSIGGYLVSQAYRQCEAGLVAPFEYIAMPMAVIWGILVFDEWPDAPVWIGSTLI 294
Query: 294 VIAMVVYLLPT 304
+ A +V +
Sbjct: 295 IGAGLVSVWRE 305
>gi|317153172|ref|YP_004121220.1| hypothetical protein Daes_1460 [Desulfovibrio aespoeensis Aspo-2]
gi|316943423|gb|ADU62474.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
aespoeensis Aspo-2]
Length = 295
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 97/294 (32%), Gaps = 17/294 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P +G ++ A ++W + F++ + + + + R W +FFA
Sbjct: 3 QPQTLGYVYALLAVVIWSGNFVIASGFVDALPPITLAALR--WGTATLFFAPFVVGRMRR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
N + + + T + V Y+ T + TP+ V L +FL
Sbjct: 61 EWPAIRAN--LLPLCGAAFTGVTVFNTLIYYSARTTDTVNLALLTGTTPIFVVILSRLFL 118
Query: 140 KERLNHLQIIAALLIILS------------LLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
E++ + + + L +T +G + LA + ++
Sbjct: 119 GEKITPFRAAGLAVAVGGMVAIATRGDLDMLRTLTFRTGDLTMLLAGLLWAVYSILIKRR 178
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
P S F ++ + L + + L + F ++
Sbjct: 179 SPSVSLFSFLGVTFLIGLIPLIPAALIEQHFHPAWAMTPAIVGAALYTGLGASLAAFFLW 238
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + T + +Y P+ +++ F+L QPI + F ++ +V+
Sbjct: 239 SSAVCLIGPGTSSLFQYLTPVFSGITAYFLLGQPITVWHGVGFVLIFTGVVLAT 292
Score = 36.0 bits (81), Expect = 7.1, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 39/144 (27%)
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
M + + +AV + F + V + + LF+ +
Sbjct: 1 MLQPQTLGYVYALLAVVIWSGNFVIASGFVDALPPITLAALRWGTATLFFAPFVVGRMRR 60
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ + + Y + + ++ T P+ +++ S L +
Sbjct: 61 EWPAIRANLLPLCGAAFTGVTVFNTLIYYSARTTDTVNLALLTGTTPIFVVILSRLFLGE 120
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPT 304
I R + V MV
Sbjct: 121 KITPFRAAGLAVAVGGMVAIATRG 144
>gi|319784545|ref|YP_004144021.1| hypothetical protein Mesci_4863 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170433|gb|ADV13971.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 325
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 98/307 (31%), Gaps = 16/307 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T+ G + + ++ + V +++ R +++ + + + +
Sbjct: 19 HDTLTGIMLKIVSVAVFVGMQTCIKAAGTVPAGQIVFFRSFFAIFPIIAFLAFRKELGTA 78
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + + G +AL + P++ V S+FL
Sbjct: 79 F-----TTKRPFNHIARGLVGVCAMGLGFFALTRLPLPEAITLNYAQPLLVVVFSSIFLG 133
Query: 141 ERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A + ++ +LI++ + +A +A A + V
Sbjct: 134 EAIRVYRWSAVAVGLVGVLIISWPELTLLSSDQALDDQEVLGVMAALVAAAISAVAMLLV 193
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ ++ ++ V + S + L+ G + +
Sbjct: 194 RNLVQSERTATIVLWFSVTASVMSLLSLPFGWQALTPLQAALLVAAGFCGGLGQILMTAA 253
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV-INSG 309
+ A+ S V EYT+ +L +V + + IVV A + + +
Sbjct: 254 YRHAEASVVAPFEYTSMILGLVVGYLVFGDVATLHMLVGGLIVVAAGIFIIWRERQLGLE 313
Query: 310 KNKTKKS 316
+ +T+K+
Sbjct: 314 RTRTRKA 320
>gi|315127491|ref|YP_004069494.1| inner membrane protein [Pseudoalteromonas sp. SM9913]
gi|315016005|gb|ADT69343.1| inner membrane protein [Pseudoalteromonas sp. SM9913]
Length = 333
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 91/283 (32%), Gaps = 17/283 (6%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A LWG + + ++ + VI R+L +L +++
Sbjct: 19 LCLIIATFLWGSSFIALKYAIAIYDPALVIFLRMLTTLLISLCL------WRYVIRFEYL 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L S +++ F +A+ P+I FL LKE ++
Sbjct: 73 KGDWKYLLGMSLAEPCLYFLFEGHAMEYTSASQAGVIVSCLPIIVAFLAFFMLKEHISKA 132
Query: 147 QIIAALLIILSLLIMTL----------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ L I +++TL L L V + Y K + S
Sbjct: 133 IVVGFTLCIGGSILLTLLSPSSSQAPNPLLGNFLELMAMVCAAFYTVCIKHLANRYSPLT 192
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I + ++ F L + + +++Y I + +
Sbjct: 193 LIALQGVSGSLFFAPFLLFIDLPSENQHDLTALMSILYLGSCVTLGGYGMYNYAISKVSV 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T P+ ++ S IL + + + I +V I +++
Sbjct: 253 LTAAAYSNLIPIFTLILSAIILNEVLTLGQWISIFVVFIGVMI 295
>gi|229079863|ref|ZP_04212395.1| Uncharacterized transporter [Bacillus cereus Rock4-2]
gi|228703447|gb|EEL55901.1| Uncharacterized transporter [Bacillus cereus Rock4-2]
Length = 304
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 90/286 (31%), Gaps = 13/286 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+F A ++ Y T S VTP+++ L VFL E++ I
Sbjct: 72 ---FFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILAFVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTICMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y P+ + L + V I I ++ +V+ +P +
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVSIIGGVITILGIVIAHIPVLRKEK 294
>gi|254250239|ref|ZP_04943559.1| hypothetical protein BCPG_05125 [Burkholderia cenocepacia PC184]
gi|124876740|gb|EAY66730.1| hypothetical protein BCPG_05125 [Burkholderia cenocepacia PC184]
Length = 389
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P +F +
Sbjct: 81 KTRLIGYLYLAAAMAGVGSTVVASRLAAGGLPPFAATALRFLIATPLLFALMRAQRMRWP 140
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ AV +++ +A + I P +S + +V L
Sbjct: 141 RISA----RDAVLLVIQAAAGGVGYTVLLISGTKLSSPLDAGVMLGTLPAMSTLIAAVVL 196
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIP 189
+ER +AA L +L +T G + SL + + + +
Sbjct: 197 RERQTPRDWLAAALATAGVLFVTFAPGHAMPSLQTLAGDALVLAAVACEAVFILLNRRLA 256
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
L V + + + + +
Sbjct: 257 APLPPLALSTAMSGLGFMLALVPAAFEWQAVASGWTVRAVSAIVYYALIPTVLGYLCWYA 316
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + R +VV M+V
Sbjct: 317 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLTGTRVAGIALVVAGMLV 366
>gi|312880811|ref|ZP_07740611.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
gi|310784102|gb|EFQ24500.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
Length = 298
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 73/279 (26%), Gaps = 13/279 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A LWG+ + L+ + ++ R L + +
Sbjct: 14 ILLAAALWGVGFGVLKDVLDYLPPFTLLVLRFLPGGVLLGLFFLRRFRETG--------W 65
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ +L + L +F ++ F +
Sbjct: 66 DDLRDGALVGLLLFGGFACQTTGLQWTTAGKQAFLTATYVLLVPFFSWGIHRAFPGGRVF 125
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVT----WSAYCFARKTIPVGSSEGFFIEMCVLA 204
A+ + + + ++TL + + A + + +
Sbjct: 126 AASGICLAGMSLLTLRGASGINLGDGLTLVSAVFFAGHLMAVERFTRRRDPLVLASLQMV 185
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ L + + F + + F F + + K + ++
Sbjct: 186 VLGLCALPFALFERPDLGGIPLRGWIGFGYMLLFCTIGAFALQNLAQKYTPSTHAALLFS 245
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
T L S V +L + +++ A+++ LP
Sbjct: 246 TEALFGAASGVLLLGETFTPPMATGAALMMGAILLVELP 284
>gi|294101363|ref|YP_003553221.1| protein of unknown function DUF6 transmembrane [Aminobacterium
colombiense DSM 12261]
gi|293616343|gb|ADE56497.1| protein of unknown function DUF6 transmembrane [Aminobacterium
colombiense DSM 12261]
Length = 294
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 93/287 (32%), Gaps = 17/287 (5%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
V A + WG + T+ + +VS + V+ R + + L +
Sbjct: 11 VLLAVLFWGGSYTATKIAVSRVSPVAVLWLRFGIGAAVLGLVLFLKKRLQLLPLHQM--- 67
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + +H + L T +++ TPVI L + LKE+L Q
Sbjct: 68 --TELCFLGFFGVFLHNYIQAWGLRTAAAGISALIIACTPVIIALLSAFLLKEKLVQRQS 125
Query: 149 IAALLIILSLLIMTLHSGIPLLSL-----------AIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ +L + + L A TW+ + +
Sbjct: 126 LGIIMAAFGVLFILSKGNLAFLKEGNYSFGELLVVCSAFTWALFSVFSRKALKTIPPALA 185
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ +L+ + + E L L ++ + + +K S
Sbjct: 186 MFYVILSGWFFSSIPFLFQGVREISKLDMAGWGSTLFLGVFCSALAYVFWYDALKLLPAS 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
VG+ Y +P++ + + L +P+ I G+V+ + +
Sbjct: 246 EVGVFLYISPIVAVAVAWIFLGEPLLLSSIIGGGLVLTGVSIVNYRK 292
>gi|329729630|gb|EGG66031.1| putative membrane protein [Staphylococcus aureus subsp. aureus
21193]
Length = 288
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/293 (15%), Positives = 102/293 (34%), Gaps = 6/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G + + + I + ++ + + V + R L ++ F I
Sbjct: 2 NPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFMPLFFIY------KY 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ +T+ + IYA+ + P ++ L VFL
Sbjct: 56 HQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ IL +L++ + ++A +S A V +
Sbjct: 116 EKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF V+ + + L+L+G GL + + A +
Sbjct: 176 TIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I Y + + + + + D T+ + +++ A ++ K
Sbjct: 236 IFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK 288
>gi|288556312|ref|YP_003428247.1| putative chloramphenicol efflux protein DMT family [Bacillus
pseudofirmus OF4]
gi|288547472|gb|ADC51355.1| putative chloramphenicol efflux protein DMT family [Bacillus
pseudofirmus OF4]
Length = 319
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 97/303 (32%), Gaps = 19/303 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A WG ++++ + E V L++ R W+L +FF + L
Sbjct: 13 YFLLVLATFFWGTNFVFSRLIVEYVPPLQLSLIR--WTLASLFFLPFVYKELRQHKTVLL 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
N K + ++ F+ +A A+ S ++P++ V L FLKER +
Sbjct: 71 ANWKVLTLMAFTG--VAGFNSLIYIAIQYTTSINASLVNSLSPLLIVILSVFFLKERFSA 128
Query: 146 LQIIAALLIILSLLIMTLHSGIP--------------LLSLAIAVTWSAYCFARKTIPVG 191
+Q ++ ++ ++I+ L+ + +S
Sbjct: 129 VQFAGVMVSLVGVIIVISQGSFERLLSLTFNPGDLIVLVGVFCWSIYSVVMKKFSVGLPK 188
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ F++ ++ L + + F ++ GI
Sbjct: 189 RPTFLVTMYIGIIGLFPFFLFERTYAPAAIAELPLEVILGVVYLAIFPSIVSFVCWNEGI 248
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + + L + +V I + + + I ++ +++ P +
Sbjct: 249 IQVGPAKSSNFLHLIVLFTAIIAVIIGAETLTLNQVIGGAAILTGVILASNPDYLYKRLR 308
Query: 312 KTK 314
K
Sbjct: 309 KAS 311
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 50/135 (37%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
P L +A + F + V + + + +LF++ + +H +
Sbjct: 11 YPYFLLVLATFFWGTNFVFSRLIVEYVPPLQLSLIRWTLASLFFLPFVYKELRQHKTVLL 70
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+ + + + I+ ++ +PLL+++ SVF LK+ V+
Sbjct: 71 ANWKVLTLMAFTGVAGFNSLIYIAIQYTTSINASLVNSLSPLLIVILSVFFLKERFSAVQ 130
Query: 287 TIVFGIVVIAMVVYL 301
+ ++ +++ +
Sbjct: 131 FAGVMVSLVGVIIVI 145
>gi|229008370|ref|ZP_04165845.1| Permease, drug/metabolite transporter superfamily [Bacillus
mycoides Rock1-4]
gi|228752897|gb|EEM02451.1| Permease, drug/metabolite transporter superfamily [Bacillus
mycoides Rock1-4]
Length = 316
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 107/299 (35%), Gaps = 18/299 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWGI T++ LE + ++ R+ ++ FS
Sbjct: 8 ISMLLVAVILWGIAIAPTKWALESIQPFTLLFLRLCFAGGICLL----FSFQPLRKSIVN 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+N + + S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 64 RNVPWKRISLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + ++ +T+ SG S ++ A ++ + +
Sbjct: 124 NYWIGIILGFIGVVCITIPSGNNDQSASLIGDILILLSTFLFAFYTILLKRPKQEKNLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ + V F G F + ++ ++
Sbjct: 184 EVFTTLTLIIGAMILFPFAVIETFYYGLPQIDTWKTGLSFTYLVVCATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
R S G+ P + I++SV +L + + I +V+ ++ + ++
Sbjct: 244 RVSASVSGLYLNALPPISIIASVILLNESLTWKILIGGCLVLFGVIWADQDKLRVLMRS 302
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGFMKEISMLLVAVILWGIAIAPTKWALESIQPFTLLFLRLCFAGGICLLFSFQPLRKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
N+P + + F SYGI V I++ PL+ I+ S LK+
Sbjct: 61 IVNRNVPWKRISLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I +V +P+
Sbjct: 121 IQLNYWIGIILGFIGVVCITIPS 143
>gi|163801547|ref|ZP_02195445.1| hypothetical protein 1103602000597_AND4_08842 [Vibrio sp. AND4]
gi|159174464|gb|EDP59266.1| hypothetical protein AND4_08842 [Vibrio sp. AND4]
Length = 297
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/304 (13%), Positives = 93/304 (30%), Gaps = 16/304 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + + +G F+ + + + + + L + + E+++ R L SL + +
Sbjct: 2 QNSLNSMIPIGARFMVLSALGFALMTATVKHVSLYGIPLFEIVAARALVSLVISYLDV-- 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
K +L + V Y++ T + ++ PV +
Sbjct: 60 ------KRKGISIWGNNKPLLFARGAVGTVALVCVYYSVTTLPLAEATIFQYIHPVFTAL 113
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA------RKT 187
L FLKER+ I L +L L I+ P A+ +
Sbjct: 114 LAVFFLKERIQLSTFICIALCLLGLYILVRPETGPDAEHALPLLSVMIAIIGALGSSVAY 173
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ V ++ L + + G+ F + ++ T+ LI G+
Sbjct: 174 VIVRKLSQTEDSSVIIFYFPLVALPASILLMGDQFVMPDLHLTIMLILIGVFTQIGQLGL 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ S Y + +V + + I+V ++
Sbjct: 234 TKAMQTQNASKASAYSYVQIIFSVVLGFIFFGEQPSFWTYLGGTIIVSGALINAFGQHFR 293
Query: 308 SGKN 311
+
Sbjct: 294 LLRR 297
>gi|289829848|ref|ZP_06547363.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
Length = 304
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + + F + D
Sbjct: 6 RSGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQ-RTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 AWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q I L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIVRFFWCLWPDFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDTGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|241205586|ref|YP_002976682.1| hypothetical protein Rleg_2883 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859476|gb|ACS57143.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 318
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 102/303 (33%), Gaps = 16/303 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+++ G + + + ++ + ++ + + V E+ + R + + +V+
Sbjct: 10 SSASDVTTGLVLMVLSVMVSPLIDIFAKLAITTVPSGEITAGRFVVQALCMLPIVVWRRS 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + I+ V F+ L +FV P++ LG
Sbjct: 70 FAEF------SWRQSLFHAIRGAIITVSMISFVTTLKYMAVADAIAIFFVEPIMVTILGG 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+FLKE + + A + +++ S + +A+ SA C A + +
Sbjct: 124 IFLKETIGWRRYTACCVGFFGAMLIIQPSFEEVGYIALLPVVSALCIAIFVLMTRALSHR 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGG---------EHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ +++ +++ + ++ G G + + +
Sbjct: 184 EDPWSMQFQMSIWGLLFCAILLLLGQGTGSDLFDPVMPEGRAWFYVAGVGAMAAITGILG 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + A ST+ ++Y + + + + D V+ + I+V + L
Sbjct: 244 VYAYRAAPASTLAPLQYFEIVSATIFAWLVFGDFPDAVKWLGIAIIVASGFYILWRERRF 303
Query: 308 SGK 310
+ K
Sbjct: 304 ASK 306
>gi|90424685|ref|YP_533055.1| hypothetical protein RPC_3194 [Rhodopseudomonas palustris BisB18]
gi|90106699|gb|ABD88736.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisB18]
Length = 310
Score = 76.9 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/309 (14%), Positives = 101/309 (32%), Gaps = 10/309 (3%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLP 65
++ ++ L++ + P G + + A + + ++L + +EV R L +
Sbjct: 4 PRDVARKLTRRHDERP-FRGIVLIIAATVFLACSDALGKYLTLTLPSIEVAWLRFLVFVL 62
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ + + G+ V L FI +L + S + F
Sbjct: 63 IMVPVAMASG-------SSPLKSVRPGLQVLRGLALVFSSVIFISSLRYQPIAQASATSF 115
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
V P+ L V L E + + IA L+ ++ +LI+ A+ SA +A
Sbjct: 116 VAPLFVTALSVVVLGETVGPRRWIATLVGLVGVLIVVQPGTAAFNPAALLTLASALLWAA 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ G + +A A+ + ++ D +G G+ ++
Sbjct: 176 TLVMTRMISGADRVVTTMAFAAIVGFAVLSVLVPFVWVTPSLSDLGLGLGVGIASTAGQW 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
I + A S + Y + + + V + + + I++ +Y
Sbjct: 236 IVVLAFRHAAASMLAPFSYIQLVWVTIIGVVVFGELPGLWTFVGAAIII-GSGIYTAHRE 294
Query: 306 INSGKNKTK 314
+
Sbjct: 295 RLRHLRQVA 303
>gi|303247505|ref|ZP_07333777.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
gi|302491201|gb|EFL51093.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
Length = 297
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 89/294 (30%), Gaps = 17/294 (5%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + +LWG T + + L + R L + +FF G + L
Sbjct: 8 LIGSAVLWGGTWVAGRVLGRYLEPFSAAFMRFLIASIFLFFLTARLEGRVPKLTRQT--- 64
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+L+ +AT + + F L T + P + ++ KER L+
Sbjct: 65 -LPWLLLLAATGIFAYNALFFAGLRTVPAGRAAMIVASIPAVVALFSALLFKERFTVLKA 123
Query: 149 IAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + ++ G + + + +K + + G
Sbjct: 124 CGIAVSFAGVGLIVSGGDPGALLRQGLSFGDVCIFGCVLTWAAYTLAGKKAMERVAPYGA 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
C+L L + G + L L F F + G++
Sbjct: 184 VTWSCILGAAMLLPPALATGLVRDVAAAGPVAWGCLLFFGVLATGFGFSWYYEGVRAIGP 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ G+ P+ + +L +P+ + + +V+ + + + +
Sbjct: 244 TKAGVFINLVPVTAVFLGWLLLGEPLSSSLALGGTLVLAGVWLTNRRPLQTKNR 297
>gi|182434466|ref|YP_001822185.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178462982|dbj|BAG17502.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 323
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 85/289 (29%), Gaps = 18/289 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S P + A +WG T L L L + R L +
Sbjct: 2 TSRPNIRTAALTGLAPAVWGSTYLVATELLPPDRPLLATTVRALPGGLVLLAL------- 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ V + A G + + P+ V L ++
Sbjct: 55 ---GRRLPAGVWWWRAPVLGVLNIGAFNFLLFLAAYRLPGGIAAVIMSAQPMFVVVLAAL 111
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
FL ER+ L +A ++ + ++ L PL +L + I + G
Sbjct: 112 FLGERIRALHALACVMGAGGVALLVLRGAAPLDALGVLAAVGGALCMGLGITLTKRWGRP 171
Query: 196 -----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
L L + + G L F L + ++ G
Sbjct: 172 EGVGLLTFTGWQLTAGGLVLLPFWLSLEGLPDSLTGSNVLGFAHLITLGAVLSYFVWFRG 231
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+R V + +P++ + + + + ++ + +++ A+V+
Sbjct: 232 IERLPAVAVSFLALGSPVVATLLGYLVRGETLSVLQLVGMAVILGAVVL 280
Score = 43.7 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 7/81 (8%), Positives = 23/81 (28%)
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ + L + R ++ P+ ++V + L + I
Sbjct: 59 PAGVWWWRAPVLGVLNIGAFNFLLFLAAYRLPGGIAAVIMSAQPMFVVVLAALFLGERIR 118
Query: 284 TVRTIVFGIVVIAMVVYLLPT 304
+ + + + + +L
Sbjct: 119 ALHALACVMGAGGVALLVLRG 139
>gi|157373926|ref|YP_001472526.1| hypothetical protein Ssed_0787 [Shewanella sediminis HAW-EB3]
gi|157316300|gb|ABV35398.1| protein of unknown function DUF6, transmembrane [Shewanella
sediminis HAW-EB3]
Length = 292
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 116/298 (38%), Gaps = 9/298 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ AS G L + A +L+G T L+++ + +S L++ R + + +
Sbjct: 1 MDQASQLKQSGLLELHLAVLLFGGTALFSKLI-PLSALDITLLRCFVAALVLALIVKASK 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L L + + + + ++++HW + ++ + ++F PV++V +
Sbjct: 60 HRLLL-----NSGRDYLIALGLGIVVSLHWVTYFASMQLSSIAIGMIAFFTYPVMTVLIE 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ ++ + +++ + +++ ++++ L +A+ V +A+ AR +
Sbjct: 115 PIITGNKIQRVDVVSGITVLIGVILLIPEANLGNDVTLGIAVGVLSAAFFTARNLLHKQY 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + A+ V + E + L L+ + + +F+ ++
Sbjct: 175 FSAYSGPQAMFYQTAVATVFLAPWHTVEINTIEQNVWGLILLLGIVFTAAPHALFTSALR 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV ++ P V ++F L + ++ + +VV + + + K
Sbjct: 235 HLSAKTVSLVSCLQPFYGAVLALFFLGENLEIKTILGGLLVVTTAIFETRRSRRSYRK 292
>gi|13474425|ref|NP_105993.1| hypothetical protein mlr5305 [Mesorhizobium loti MAFF303099]
gi|14025178|dbj|BAB51779.1| mlr5305 [Mesorhizobium loti MAFF303099]
Length = 318
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 97/308 (31%), Gaps = 5/308 (1%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV 60
M G L G L AY + + + L + +
Sbjct: 1 MSSGCAPSASIFKLLSPRKWKNVPNGILLALLAYASYSGSDAVIKSLGG----QFTVFEI 56
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ + ++F+ K + A +YA
Sbjct: 57 GFFVTLFAGFFLFFARPAGERWRDFWRMKRPWAVQARAWAGIASGVLSVYAFTHIPLAEV 116
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA 180
F+ P++ L +V LKE++ + +A + ++++ L +A +A
Sbjct: 117 YALIFLAPLLVTILSTVILKEKVGPWRWLAVVAGFAGVMLVVRPGFRELNLGHLAAFVNA 176
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF-SGGEHFFLGNIPDTLFLIGYGLL 239
+ A I + S +L + + +++NG + F L N ++L G
Sbjct: 177 FLAATSVILLRSLAQQEKRTSMLGVLVGYGLLFNGAGAAATSFTLPNAVQLVWLAMAGAF 236
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + K A + + Y+ + ++ ++ D + + IV + ++
Sbjct: 237 TAGGQFMQLLAAKYAPANRIAPTHYSQIVWAVILGALFFQEYPDWLTLVGLAIVGGSGLL 296
Query: 300 YLLPTVIN 307
++ +
Sbjct: 297 TMVREEVR 304
>gi|297192825|ref|ZP_06910223.1| DMT superfamily permease [Streptomyces pristinaespiralis ATCC
25486]
gi|197722374|gb|EDY66282.1| DMT superfamily permease [Streptomyces pristinaespiralis ATCC
25486]
Length = 320
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 95/286 (33%), Gaps = 7/286 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + A+ T GT+ + A +L G ++ S EV+ R L+ + +
Sbjct: 5 TAQTAANATRRGTVELTLAMVLSGTLGIFVVE-SGASPFEVVFFRCLFGALALGAYCLA- 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
D P+ + + + +W F A L + Y P V L
Sbjct: 63 ---RGYFTDHAFTPRKLALAALGGVFIVFNWVFLFEAYEESSISLATAVYHTQPFYVVLL 119
Query: 135 GSVFLKERLNHLQ--IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
G++ KERL + L L+ S L+ +A +A T+
Sbjct: 120 GALLFKERLTAATFGWLGVAFAGLLLVSGVSPSDPGSLTGLGFALLAALFYAVSTVITKR 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + L + + F+ + + ++ + +
Sbjct: 180 VTGVRPHLVALVQVLVGIPLLLPFADLAAVNGLGAGWAWLVGLGVIHTCLMYVLMYSAYQ 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ S + ++ + P + +V+ + I V+ + ++++A +
Sbjct: 240 KLTTSKIAVLAFVYPAVAMVADGVVYGNRIGLVQALGVPLILVASL 285
>gi|167758144|ref|ZP_02430271.1| hypothetical protein CLOSCI_00482 [Clostridium scindens ATCC 35704]
gi|167664041|gb|EDS08171.1| hypothetical protein CLOSCI_00482 [Clostridium scindens ATCC 35704]
Length = 296
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 94/287 (32%), Gaps = 15/287 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVL--EVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LFV A +LWG + T+++ + + + R+ + + ++ ++
Sbjct: 9 LFVLMASVLWGSMGIVTRYVADIGFTTRQTAAVRICSAAAVLILFLLITDHRKLKIEKQD 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
L ++ + + + + P + + +F KE+L
Sbjct: 69 LKWFLGT----GLGSLFINNLAYAETVQRASLSVAVVLLYTAPFFVMIMSILFFKEKLTL 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCFARKTIPVGSSEGF 196
+++A LL +++ SG S +S Y K +
Sbjct: 125 QKVVALLLSFAGCVLVVGLSGANAGSNGAVTLLIGLCAGFGYSLYSIFGKVLVGKYDSLT 184
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ ++ S + + L +IG + + + +S G+K +
Sbjct: 185 VTVYTFIFSSIGTLIICQPASMAQRIVENSSKMPLVIIGSVVTLALPYVSYSIGLKYMES 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S I+ + + V + + +D I VV A+++ +
Sbjct: 245 SKASIISSFEVVAASLFGVALYHETLDAYNMIGIICVVSALILLQVN 291
Score = 36.8 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 46/134 (34%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
PL L +V W + + + + A +++ + +
Sbjct: 8 PLFVLMASVLWGSMGIVTRYVADIGFTTRQTAAVRICSAAAVLILFLLITDHRKLKIEKQ 67
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
FL ++ ++RA LS ++ YTAP +++ S+ K+ + +
Sbjct: 68 DLKWFLGTGLGSLFINNLAYAETVQRASLSVAVVLLYTAPFFVMIMSILFFKEKLTLQKV 127
Query: 288 IVFGIVVIAMVVYL 301
+ + V+ +
Sbjct: 128 VALLLSFAGCVLVV 141
>gi|56695150|ref|YP_165497.1| hypothetical protein SPO0228 [Ruegeria pomeroyi DSS-3]
gi|56676887|gb|AAV93553.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 402
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/307 (15%), Positives = 100/307 (32%), Gaps = 25/307 (8%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ T+ G LF+ A ++ I + + L + +V +++ R +++LP +Y
Sbjct: 83 QPEGATTLTGILFLLLATTIFPIQDVIIKSLSSEFAVHQIVFWRSVFALPIAAAMALYEG 142
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + A + + AL T+ F TP+ L
Sbjct: 143 SLWPW------KIGSWPLQLTRAVAAFSSYLVYYMALAAIGLAETAAITFSTPIFVTLLA 196
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+VFL E++ + +A L + +L++ A+ +A +A I
Sbjct: 197 AVFLGEKIGLWRWLAVFLGMAGVLVIVQPGASVFEPAALLALAAALFYAISIIATRRLGN 256
Query: 196 FFIEMCVLAIPALFYV------------------VWNGFSGGEHFFLGNIPDTLFLIGYG 237
+ + L Y+ + + D L L G
Sbjct: 257 RTNGGTMTLVTLLVYIVGGTVLGLVFSGLETASPHPSLAFLYRDWIAPAPMDWLALAALG 316
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + F S + A+ S V EYT ++ + I ++V +
Sbjct: 317 VTSGIGFFALSQAYRMAEASVVTPFEYTYLPWAVLWGYLVFGVLPVMSTWIGLTLIVGSG 376
Query: 298 VVYLLPT 304
++ L
Sbjct: 377 LLILFRE 383
>gi|86140121|ref|ZP_01058684.1| integral membrane protein [Roseobacter sp. MED193]
gi|85823216|gb|EAQ43428.1| integral membrane protein [Roseobacter sp. MED193]
Length = 320
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 102/305 (33%), Gaps = 25/305 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + + + I + +FL + +++ R L ++P + +V GG +L+
Sbjct: 10 IGLAAAAGSAVCFSIIDVLVKFLSGDYPLYQMVLLRSLIAMPILLLVMVPLEGGYHVLRT 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + F L T F TP+I L V L ER
Sbjct: 70 RQPK-----LHLIRCGAVLFANICFYTGLATMPMADAVAIAFATPLIVTLLSVVLLGERP 124
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A + L +LI+ + A+ + A +A + + G +
Sbjct: 125 GIWRWSAVAVGFLGVLIIMRPGPGTFQAAALLPFFGACGYATLHVLTRRAGGADSPAALT 184
Query: 204 AIPALFYVVWNGF-------------------SGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
P+L +++ + + D + GL S
Sbjct: 185 FYPSLAFMIVSAVLGLSTGDGRFASGDSAALDFILRAWVWPASGDWWAFVALGLTASIGG 244
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S+ ++ + V EY A + + + + ++ D + +++ A +V L
Sbjct: 245 YLISFAYRQCEAGLVAPFEYIAMPMAVFWGILVFQEWPDLPVWLGSALIIGAGLVSLWRE 304
Query: 305 VINSG 309
N+
Sbjct: 305 TRNNR 309
>gi|294668655|ref|ZP_06733751.1| integral membrane protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
gi|291309417|gb|EFE50660.1| integral membrane protein [Neisseria elongata subsp. glycolytica
ATCC 29315]
Length = 374
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 80/275 (29%), Gaps = 16/275 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++W + + +F + ++ R+L S+ V L
Sbjct: 82 VFYQILALLIWSSSFIAAKFAYTMLDAALMVQARLLISVLIVLPV------CRRYLDKIP 135
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + + +AV L + P++ VF+G F +++
Sbjct: 136 KDKWKPLLWLSFLNYVAVLML-QFIGLKYTSAASAETVIGLDPLLMVFIGHFFFRDKAEW 194
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ L ++IM A ++ ++ A
Sbjct: 195 YHWLCGLTAFAGVVIMIAGGHNGGNIGFWGCLMIVAGSAVFCSITRPTQNLIADIGAPAY 254
Query: 206 P--------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L + F + +++ G+ R +
Sbjct: 255 TSLSLAVSAVMCLPFSLLLAESYQINWSWSGGIALLYLGICCSWFGYWLWNKGMSRVPAN 314
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
G++ P+ I+ +V +L + I V + I
Sbjct: 315 LSGLLLTLEPVFGILMAVIVLDEYISAVSGLGMMI 349
>gi|223983880|ref|ZP_03634042.1| hypothetical protein HOLDEFILI_01323 [Holdemania filiformis DSM
12042]
gi|223964159|gb|EEF68509.1| hypothetical protein HOLDEFILI_01323 [Holdemania filiformis DSM
12042]
Length = 284
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 92/279 (32%), Gaps = 9/279 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G F+ + + + L+ + + ++ R L + ++ G
Sbjct: 4 KGVQFILLSAFFFAVMNLFVKLSGDLPSVQKSFFRNLVAAGVAAVILIRSHQGFGF---- 59
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K + +L+ +T+ + YA+ S ++P + ++FLKE+ +
Sbjct: 60 --QKKNLPLLILRSTLGTIGILCNFYAVDHLVMSDASMLSKLSPFFVIIFSALFLKEKAD 117
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++Q ++ + + L + + V ++ A E L
Sbjct: 118 NVQKLSVVAAFVGSLFIIKPGLRIEQIVPSLVGFAGAMAAGSAYTCVRGLSQRGERGPLI 177
Query: 205 IPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ F + + L+ G+ + + A + +
Sbjct: 178 VFFFSAFSCLVTLPYLIFSFAPMTLLQLISLLLAGVAAACAQFSVTAAYSYAPAKEISVF 237
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVY 300
+Y+ + + + Q D + + + +++ +A+++Y
Sbjct: 238 DYSQVVFSAILGWIVFGQIPDALSFVGYALIITVAVLLY 276
>gi|90577648|ref|ZP_01233459.1| hypothetical protein VAS14_11394 [Vibrio angustum S14]
gi|90440734|gb|EAS65914.1| hypothetical protein VAS14_11394 [Vibrio angustum S14]
Length = 301
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/308 (16%), Positives = 106/308 (34%), Gaps = 17/308 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAI 71
++ N SL +G F+ + + + + +++ + V E+++ R SL + I
Sbjct: 1 MTTSNESL-IPLGARFMLLSALGFALMSSTVKYVSQVGIPVFEIVAARAAVSLIISYLDI 59
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
K +LV + + YA+ T + + PV +
Sbjct: 60 --------KRKGIPVWGNNKPLLVVRGIMGTIGLSCVYYAVTTLPLAEATILQYTNPVFT 111
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFAR 185
L +FLKER+ ++ +L I+ L + + L + A+ A
Sbjct: 112 AVLAVIFLKERVQLSTMVCIILSIMGLFFIVNPTTLTTGASHLPLYSVMIALIGAFVSAI 171
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I V ++ L + + ++F + ++P T+ LI G+
Sbjct: 172 SYIIVKKLSNTEDSSVIIFYFPLITLPLSLIIIADNFVVPDLPTTICLIFVGIFTQVGQV 231
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ Y +L I+ I K+ I +++ VV L +
Sbjct: 232 GLTKAMQTQAAGKATAYSYVQIVLSIILGFIIFKEVPSIWTYIGGVLIISGAVVNLFGSN 291
Query: 306 INSGKNKT 313
I +T
Sbjct: 292 ILKKIKRT 299
>gi|56695977|ref|YP_166331.1| hypothetical protein SPO1080 [Ruegeria pomeroyi DSS-3]
gi|56677714|gb|AAV94380.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 308
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 93/295 (31%), Gaps = 8/295 (2%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ A + G L++ A + + + + + + + ++ R L + V A+
Sbjct: 10 QTADSRPLAGILWMLAAGLCFVVMTAMVKSMGQGMHPIQSAFLRYLLGIVFVLPAL---- 65
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + M I AV + +A+ + ++TP+
Sbjct: 66 ---RSLLAARLTRRHWTMFGLRGAIHAVGVMLWFFAMTRIPLAEVTAMNYLTPIYVSLGA 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++FL E L +I A + ++ I+ + +A+ + + ++
Sbjct: 123 ALFLGETLAARRITAIFVALIGAAIILRPGFREISPGHLAMLGTTLTLGGSYLLAKAAVA 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
V+A +++ V + + L + + ++ A
Sbjct: 183 DLSPAVVVAHLSIWVTVAMIPFAVAVWQTPSWQQLAVLFAIASFATAGHYFMTLALQAAP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ + + + + + + +D +++ ++ + +
Sbjct: 243 VAVTQPVTFLQLIWATLLGALVFGEGVDIWVVAGGTLILASVSFITWREAVLKRR 297
>gi|331082720|ref|ZP_08331843.1| hypothetical protein HMPREF0992_00767 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400339|gb|EGG79981.1| hypothetical protein HMPREF0992_00767 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 302
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 91/292 (31%), Gaps = 9/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + ++ + + ++ R + + ++
Sbjct: 17 KKQYKGIFYIILSAFCFSLMDMFVRMSGDLPSIQKSFFRNVVAAVFGCILVLKEKDSFQW 76
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + K M + YA+ S ++P V + LK
Sbjct: 77 KKGSGKYLILRSM------FGTLGILCNFYAIDHLALADASMLNKMSPFFVVIFSFLLLK 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E++ Q + + L + S + L+ I + A T+
Sbjct: 131 EKVTITQTLLVIGAFCGSLFVVKPTVSNLDLVPSLIGLLGGLGAGAAYTMVRKLGTIGVK 190
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F V + + T+ L+ GL + + A S
Sbjct: 191 GPFIVFFFSTFSCVVTLPWLIFDYHTMTLAQTVILLMAGLCAAGGQFAITAAYCYAPASE 250
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV-VIAMVVYLLPTVINSG 309
V I +YT + ++ + +Q D + + I+ ++A+ ++ ++
Sbjct: 251 VSIYDYTKVIFSMILGFVMFQQIPDFYSWVGYIIICLMAIFMFFYNKRRSAR 302
>gi|326801612|ref|YP_004319431.1| RarD protein, DMT superfamily transporter [Sphingobacterium sp. 21]
gi|326552376|gb|ADZ80761.1| RarD protein, DMT superfamily transporter [Sphingobacterium sp. 21]
Length = 297
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 59/292 (20%), Positives = 119/292 (40%), Gaps = 9/292 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG L + L + L+++ HRV+++ + F F +
Sbjct: 4 YLSAVLGFAIWGTFALVLKPLSAYAALDILIHRVIFAAISIAFVCFMFRRKQTFASIHYV 63
Query: 87 NPKAV-------GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + FSA +L ++W FIY + TS +Y + P+++ L S+FL
Sbjct: 64 KTISPKERVKLLINMFFSAIMLGLNWFSFIYVMNAVSVNATSLAYLICPILTTVLASLFL 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+E+LN Q A LL ++S LI+ + L+ + A + + F +
Sbjct: 124 REKLNIGQWFAVLLSLISCLILAYGHFMDLIYSMVIALSYAIYLVLQKNTFQMDKFFTLT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ L + + I + + +K S V
Sbjct: 184 IHIVVSTFLLLPILTVIDTTVPKTMTFYGL--VAIIAVGYTIIPLFLNIFALKGLDSSIV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G + Y P++ + ++ K+PI+TV+ I FG++ A+V++ + + +N
Sbjct: 242 GTLLYLNPIISFLLAILYYKEPINTVQLIAFGMIFTAVVIFNIAYLYGRKRN 293
>gi|218130850|ref|ZP_03459654.1| hypothetical protein BACEGG_02445 [Bacteroides eggerthii DSM 20697]
gi|217987194|gb|EEC53525.1| hypothetical protein BACEGG_02445 [Bacteroides eggerthii DSM 20697]
Length = 320
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 92/292 (31%), Gaps = 15/292 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + A +G+ PL+ L V V+ +R +++ + +
Sbjct: 17 MTNDRLKGFTYGALAAASYGLNPLFALPLYGAGMKVDSVLFYRYFFAIVMLGILMKVKKQ 76
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L K + + + + F + + S FV PV+ + +
Sbjct: 77 SFALKKTDILPLAVM------GLLFSFSSLFLFESYNYMDAGIASTILFVYPVMVAIIMA 130
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIP 189
+F E+++ + + + L + ++ L + ++T++ Y
Sbjct: 131 IFFHEKVSFITMFSIALAFTGISLLYEGGDGRTLNLLGVLFVILSSLTYAIYIVGVNRSS 190
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + L + YVV F + +
Sbjct: 191 LKNLPTAKLTFYALLFGIIIYVVRLDFCTALQPVPAPLLWVNVFSLALFPTIISLIAMTL 250
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I R + I+ P+ + V + + + + +++ A+ + +
Sbjct: 251 SIHRIGSTPAAILGALEPVTALFCGVVVFGEQLTPRIMLGVLMILTAVTLII 302
>gi|66820286|ref|XP_643774.1| hypothetical protein DDB_G0275205 [Dictyostelium discoideum AX4]
gi|60471929|gb|EAL69883.1| hypothetical protein DDB_G0275205 [Dictyostelium discoideum AX4]
Length = 514
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/332 (9%), Positives = 102/332 (30%), Gaps = 38/332 (11%)
Query: 15 SKENASLPTMMGTLF--------VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLP 65
S + T+ G F + +++ + + + ++ + + R++ + P
Sbjct: 7 SLKTRIKKTIKGITFEDLKVHLVLLSVCLVFSVFYIVAKLAMDNIPPFVFLMFRLVIATP 66
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
++ + S + + + + + + ++ F+Y L +
Sbjct: 67 LLWLMAIILSPD--TVFKLPTKKEFILLSISGIFSVTINQSLFLYGLYLSGATNAAIVQP 124
Query: 126 VTPVISVFLGSVFLK--------ERLNHLQIIAALLIILSLLIMT-----------LHSG 166
+TPV S L + + +I + ++ ++M ++
Sbjct: 125 LTPVFSAILAVLLKFERKTKLKLYVRVCVCVIGVAIAVIGAVLMVDFTHLKSNDSNRNNI 184
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS--------G 218
+ + T + F P+ G C+ + +
Sbjct: 185 LFGNLCFLGNTLAYAIFLLSQKPLIDDGGMSASKCMAWSFTIGTPPVIAIALLIAKSEIS 244
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ + + ++ F S+ + ++ +TV + PLL V + L
Sbjct: 245 SQVAQISLFGWLSVIYCAIFATAYAFFASSWAVAKSDSTTVSVYLTVEPLLTGVLAYIFL 304
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + + +++ + ++ + K
Sbjct: 305 SEILTPLNIVGGFVILFGVGAVMVSKYRENKK 336
>gi|332715544|ref|YP_004443010.1| hypothetical protein AGROH133_09645 [Agrobacterium sp. H13-3]
gi|325062229|gb|ADY65919.1| hypothetical protein AGROH133_09645 [Agrobacterium sp. H13-3]
Length = 303
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 8/307 (2%)
Query: 8 KEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGV 67
+ K + +G L + A + G+T L +++ R + L +
Sbjct: 5 DQSEKQENPRENDARAGIGWLLMDMALVSGGMTALVKAQGVTYPAFQLVFIRAMIGLIFI 64
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
I G ++ +K +N + A+ A+ + F
Sbjct: 65 LPLIWRHRGEMARVKYPWRNLFRIC-------CNAIALTSNFVAITLLPLATVNAVGFSR 117
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
P++++ + VFL E+++ + + A L + +L++ G + + + V S A
Sbjct: 118 PLVTMAMAVVFLGEKVSRYRWVGACLAFVGVLVVIGPGGAEINAGVLVVLVSVVFGALAV 177
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I + ++ + V + D + L+ GLL F
Sbjct: 178 IQTRALRQ-ENTTVMMVFYTVGLAVITAVPAIWTWKPVMPLDWVALLAIGLLAQMGQYCF 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ A S + + Y + L +I F+ + + + I+++++ +
Sbjct: 237 LRAYRIADASVLAPVGYLSILFVIAVGYFLFDEVPEARVVLGIAIILVSLQATAFAEYLL 296
Query: 308 SGKNKTK 314
+
Sbjct: 297 RKLRGRR 303
>gi|269114764|gb|ACZ26226.1| SxtPER [Lyngbya wollei]
Length = 405
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/289 (11%), Positives = 83/289 (28%), Gaps = 7/289 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + ++G L + A +++ T+ + +S +++ R + +
Sbjct: 72 TTSAPENNRYLLGVLLIILATLIYSSIFPVTKGLISHISKEVLVAVRFTMAAVVFAPFL- 130
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+L +++ +G+L + A A F S + + + +
Sbjct: 131 -----RNLNIRLVRDGAIMGLLFLGTYVSATFGLETFSANRGAFTFGLSAIFVMLFDLLL 185
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L ++ +G LL +
Sbjct: 186 GKRIAPRAILGAVLAFNGIGVMFWGSGESLNGAGWLLLCALFNSAFLIAIQQFVQRHPTV 245
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L+ ++ + + I G +
Sbjct: 246 QLVAVGLWVPAVAGLLWAAPELTGHFEAIVASLSVNLGGLIYLVVVDTIVFTWIEMIGQR 305
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V I++ PL+ + S ++L + +T I G+V+ AM++ +
Sbjct: 306 WVPATEVAILQTLEPLMTAIISFWLLGETFETHDFIGAGMVLAAMILVV 354
>gi|320547442|ref|ZP_08041729.1| DMT superfamily drug/metabolite transporter [Streptococcus equinus
ATCC 9812]
gi|320447919|gb|EFW88675.1| DMT superfamily drug/metabolite transporter [Streptococcus equinus
ATCC 9812]
Length = 318
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/303 (14%), Positives = 108/303 (35%), Gaps = 10/303 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
N + G++ VF A I WG++ + QFL ++V ++IS R+L S +
Sbjct: 15 NNMNKNLKGSIMVFIAGIAWGLSGVCGQFLMSRGMNVSQLISMRLLISGTVLTAIA-ATK 73
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+L+K VG+L+F+ ++ ++ A+ + +++P++ +F
Sbjct: 74 YRENLVKVLRSKGVLVGILLFAILGFLMNQYSYLVAIDYTNAGTATVLQYMSPIVVLFFV 133
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
++ + + +A +L I+ H L + +A
Sbjct: 134 ALKERRIPEINEFLAIFFAVLGTFIIVTHGRLDGLAITPKGLVFGLLSAVTAAFCVVLPA 193
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G F + + + + + L G+ + +F
Sbjct: 194 KYVREYGSFPVIGLGMLMGGTISFFTTQAWQYPLVLNQGNLIGLFGIIGIGTILNYSLFF 253
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G +M P+ +V +V ++ + + ++++A+++ L +I
Sbjct: 254 MGTAIIGSVKGSLMAAVEPISSVVFTVILMHDVFYPMDFLGMLLIIVAVLLISLRDLIAL 313
Query: 309 GKN 311
+
Sbjct: 314 RRR 316
>gi|242280734|ref|YP_002992863.1| hypothetical protein Desal_3273 [Desulfovibrio salexigens DSM 2638]
gi|242123628|gb|ACS81324.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
salexigens DSM 2638]
Length = 315
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/305 (11%), Positives = 81/305 (26%), Gaps = 17/305 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+ S T++ + A +LWG + + L ++ V+ R + + I
Sbjct: 2 STSKSNTTIIPVFSILAAVLLWGSSFAAMKHLVGNLNPWAVMWMRTGIATLALTPFI--- 58
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L K + + + + +++ YAL P++
Sbjct: 59 ---SRLAAPVKKGKDRFALAIMALFMPCLYFLSESYALTFTTATQAGLISASLPLMVSAG 115
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS- 193
F KE+ + L +L + ++TL A+ A
Sbjct: 116 AGFFFKEKTTLAGWLGLALSMLGVAVLTLSGSPSGNGSNPALGNMLELLAMICAAGYMLL 175
Query: 194 ---------EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ A F + + F
Sbjct: 176 VKRLSASYGPWTLTAVQNSAGCIFFLPGMYLLIRDGLGPDPLNVILIAGYLGAFVTLGAF 235
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++ G+ R P + F+L + ++ + + ++ + +
Sbjct: 236 GLYNVGMSRLPAGKASAFINLVPAIAAFFGWFLLGETLNFTQMLASLVIFAGVGLAQSGG 295
Query: 305 VINSG 309
IN
Sbjct: 296 RINWK 300
>gi|163759104|ref|ZP_02166190.1| hypothetical protein HPDFL43_05050 [Hoeflea phototrophica DFL-43]
gi|162283508|gb|EDQ33793.1| hypothetical protein HPDFL43_05050 [Hoeflea phototrophica DFL-43]
Length = 303
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 102/301 (33%), Gaps = 14/301 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G L + ++ + + + +++ R +++ + +
Sbjct: 1 MTGILLKVASVSVFVTMSTLIKSGGEALPAGQIVFFRSAFAILPILAYLALRGQ-----L 55
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
DT + + G Y ++ + P+++V ++FL E+
Sbjct: 56 DTAWRTANPLSHFRRGLVGVLAMGCGFYGIMHLPLPDAIAIGYAMPLLAVVFAALFLGEK 115
Query: 143 LNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ + A ++ + +LI++ G A+AV SA A I V
Sbjct: 116 VRIFRWSAVVVGLGGVLIISWPRLNLFGDGFGSTEAFGALAVLTSATLGATAMILVRKLV 175
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ +L V + + + + + P L + G + + + A
Sbjct: 176 LTEKTPTIVLYFSLTATVLSLVTVPFGWVVPDWPTLLMMALAGFCGGLGQILLTQSYRHA 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+STV EYT+ +L I+ F+ IVV A + ++ + + +
Sbjct: 236 DVSTVAPFEYTSIILGILIGYFLFGDVPTWTMLTGTTIVVGAGLFVIMREHRLGLERRDQ 295
Query: 315 K 315
+
Sbjct: 296 R 296
>gi|119384637|ref|YP_915693.1| hypothetical protein Pden_1902 [Paracoccus denitrificans PD1222]
gi|119374404|gb|ABL69997.1| protein of unknown function DUF6, transmembrane [Paracoccus
denitrificans PD1222]
Length = 308
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 94/302 (31%), Gaps = 9/302 (2%)
Query: 11 SKGLSKENASLPT-MMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVF 68
+ G+S+ L + G L++ A + + G+ + + E R + L +
Sbjct: 2 AGGMSRATPILRNDLPGILWMLAAGLCFVGVNGTVRWLGQALPAAEGAFIRFAFGLLFLV 61
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
A+ P+ + V + + + YAL + ++ P
Sbjct: 62 PAL-------GPALRRGFAPRIWALFVLRGGLHVLAVILWFYALARITVAEVTAIGYLNP 114
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
++ ++ + ER++ + +A + + +I+ L +A ++ F +
Sbjct: 115 IVVTLGATLLMGERISWRRALAIAVALAGAMIVLRPGIRVLEPGHVAQLGASVIFGMSYL 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V+A+ +L + + L L + +
Sbjct: 175 VAKRLSELVPATVVVAMMSLTVCIGLAPIAALVWVPPTPLQYAVLACTALFATAGHYAMT 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
A L+ + + + + + +P+D + I++ A+
Sbjct: 235 RAFVAAPLTVTQPVTFLQLIWASLLGALVFAEPVDLWVLVGGAIMIGAISYITWREARLR 294
Query: 309 GK 310
+
Sbjct: 295 RQ 296
>gi|315186062|gb|EFU19825.1| protein of unknown function DUF6 transmembrane [Spirochaeta
thermophila DSM 6578]
Length = 302
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/276 (9%), Positives = 86/276 (31%), Gaps = 12/276 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G + + ++WGI+ + T+ L + + R + + +
Sbjct: 1 MERDKLIGVAAMLFSVVVWGISFVSTKIALAAFGPMMLAFIRFAMGVGVLALLLRLQGKN 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + ++ + +++ F L+ S P++S+ V
Sbjct: 61 FRV-----SQREVPLLIAGGVIGVTLYFYFENNGLVHLPASDASLIVASIPIVSLLAEVV 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVG 191
R+ + I ALL + ++ L +A A +
Sbjct: 116 VFHRRMEVREGIGALLSFAGVYLIVREGLRLTGRPAGYLLMAGAAASWVAYGFLSRPVLE 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ + L ++ + L + + ++ + + I
Sbjct: 176 RNDRLVVVFWHFVAGTLAFLPFLPTEAQHVELLDGLILVHVVFLGVGCSALAYWTYQVAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
R ++ + P + +++++ +L + + ++
Sbjct: 236 HRLGVAVANVFINLIPFITVLAALVVLGEALSPLKW 271
Score = 39.5 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 13/138 (9%), Positives = 47/138 (34%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+ T ++ G + + + + G++F + L
Sbjct: 12 MLFSVVVWGISFVSTKIALAAFGPMMLAFIRFAMGVGVLALLLRLQGKNFRVSQREVPLL 71
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ G + + F + G+ S ++ + P++ +++ V + + ++ I +
Sbjct: 72 IAGGVIGVTLYFYFENNGLVHLPASDASLIVASIPIVSLLAEVVVFHRRMEVREGIGALL 131
Query: 293 VVIAMVVYLLPTVINSGK 310
+ + + + +G+
Sbjct: 132 SFAGVYLIVREGLRLTGR 149
>gi|225869896|ref|YP_002745843.1| membrane protein [Streptococcus equi subsp. equi 4047]
gi|225699300|emb|CAW92657.1| putative membrane protein [Streptococcus equi subsp. equi 4047]
Length = 314
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 103/298 (34%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G+ + A I WG++ + Q+L V + + S R++ S + Y +++
Sbjct: 6 KGSTMILLAGIAWGLSGVSGQYLIAHGVGINALTSLRLIISGLVLSAMA-YVRQREAVIS 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L++S L ++ ++ A+ + +++P++ + S +
Sbjct: 65 LLKDKRLLRELLIYSLFGLTLNQYAYLLAIRYSNAGTATVLQYLSPILVLVYLSFKSRRL 124
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ A L IL +IM H L + + K + + G
Sbjct: 125 PAVGESCAICLAILGTVIMACHGDLSHLAINPIGLFWGLFAAVTYAYCVIKPAKLIADWG 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + + + G+ F + F G
Sbjct: 185 SLLIVGLAMLMGGVIFPILTRAWQYPLAMTYGNLRALFGIIGIGTIFAYTFFLKGASIIG 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ P+ + ++ ++K+ + + +++IA++V L ++ + + K
Sbjct: 245 PIKATLLASIEPVASVCFAIILMKEIFHPIDLLGMALILIAVLVISLRDLLLTKRKKQ 302
>gi|194289246|ref|YP_002005153.1| hypothetical protein RALTA_A1121 [Cupriavidus taiwanensis LMG
19424]
gi|193223081|emb|CAQ69086.1| conserved hypothetical protein, DUF6; putative TRANSMEMBRANE
PROTEIN [Cupriavidus taiwanensis LMG 19424]
Length = 323
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 93/297 (31%), Gaps = 11/297 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + G L + + +G ++ +F V + L A V
Sbjct: 18 TAPTDARDKLAGVLLIAVSASAFGAMAIFARFAYAAGADVYGLLLVRFLLAAAALAWVMR 77
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ G++L + + + F AL Q L + ++ P+ L
Sbjct: 78 TRGIALPP----WRRVLALAAMGGIGYVGQSFCFFSALNHAQASLVALLLYLYPLFVTIL 133
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+VFLKERL ++A +L + + L +A+ + + + +
Sbjct: 134 AAVFLKERLTTAAVVALVLCSVGAGLTVGGGAGSPLGIALGLAAAVIYSVYIIVGARLTA 193
Query: 195 GFFIEMCVLAIPALFYVVWN-------GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
G I +V+ G F L F
Sbjct: 194 GVNPIATTTVICTAAALVYGAVGLLRAGAGTPPQFPADAGGWLALAGIALLSTVLAILTF 253
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G++R + ++ P++ + + +L + I + + G+++ ++
Sbjct: 254 FAGLQRLGAAQASMLSTLEPVVTVALAALLLGEQIGPAQAVGGGLILAGVLWLTRRG 310
>gi|313107665|ref|ZP_07793848.1| putative permease [Pseudomonas aeruginosa 39016]
gi|310880350|gb|EFQ38944.1| putative permease [Pseudomonas aeruginosa 39016]
Length = 294
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 8/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S+ G + + + + + + V+ V+ R L + +
Sbjct: 4 SQPQRRNSPTQGAAMLALSALFFALMGGLIREASSTVNNETVVFFRNLVGVLFFLPLALT 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + L + T + YAL + PV +
Sbjct: 64 RGIGPLRTRRPLSHLLR-------TTYGLGGMYCYFYALAHLPLTDAMLFSYAAPVFTPL 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +++KE L ++A L+ L +L++ SG + +A+ S+ A + +
Sbjct: 117 IAHLWIKEPLTRRMMVATLVGFLGVLLVARPSGAVVAPIALVGIASSLMAACAFVSIREM 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ ALF +++ + N + L L+G GL S S
Sbjct: 177 SDSEPAYRIVFYFALFGTLFSAVPLAWAWQPLNGQELLLLLGAGLFASLGQLTMSQAYAL 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +G + Y A + V + + + ++ A ++ LL
Sbjct: 237 ASPGVIGPIAYMAIVFAGVIAWLRWDELPSHTSLLGAALIFAASLIPLLGNRPAER 292
>gi|197337702|ref|YP_002157608.1| transporter, drug/metabolite exporter family [Vibrio fischeri MJ11]
gi|197314954|gb|ACH64403.1| transporter, drug/metabolite exporter family [Vibrio fischeri MJ11]
Length = 302
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 16/285 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F+F + + + + +++ + V E+++ R L SL + + K
Sbjct: 12 GVRFMFLSALGFALMSACVKYVSNYGIPVFEIVAARALVSLIISYADV--------KRKG 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K +L+ + YA+ T + +V P+ + LG +FLKE +
Sbjct: 64 ISIWGKNRPLLLARGAVGTTALMCVYYAVTTLPLAEATILQYVHPIFTALLGVLFLKEHI 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA------RKTIPVGSSEGFF 197
+I + L +M S + + + A + V
Sbjct: 124 QKSTMICIAFCLAGLFVMVQPSMNSGSTSELPIFSIAVALCGALGSSIAYVIVRKLSQTE 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L + + F ++ T+ LI G+ + ++
Sbjct: 184 DSSVIIFYFPLVALPISSVLIWNDFVWPSLFLTMILILIGIFTQIGQYGLTKAMQTQAAG 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + + V+I + + G++V ++ +
Sbjct: 244 KASAYSYVQIVFSALLGVWIFNEIPSIWTYLGGGLIVTGALINVF 288
Score = 39.5 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 24/62 (38%)
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
Y + L+ I++Y P+ + V LK+ I I + + V + P
Sbjct: 85 LMCVYYAVTTLPLAEATILQYVHPIFTALLGVLFLKEHIQKSTMICIAFCLAGLFVMVQP 144
Query: 304 TV 305
++
Sbjct: 145 SM 146
>gi|163858146|ref|YP_001632444.1| hypothetical protein Bpet3831 [Bordetella petrii DSM 12804]
gi|163261874|emb|CAP44176.1| putative membrane protein [Bordetella petrii]
Length = 315
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 83/290 (28%), Gaps = 12/290 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L++ A G T + ++ + + + R +LP + +
Sbjct: 1 MMTRRTQGYLYLALAMATVGSTVVASKLIAAGLPPFTATALRFAVALPLFALLMAWTRTP 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +L+ + + I L PV++ V
Sbjct: 61 WPRPSRHDG----LVLLLQAGAGSVGYTALLILGLRHTSAADAGIIIGTMPVVATATAIV 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPV 190
L ER + A L +L + + SG+ L + A+ +
Sbjct: 117 ALGERPRPATLGAIALAAAGVLFIAVQAHGGQPQSGLGSLLIFGAIVCESLFILLNKRLR 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
C+ A+ L + + F ++ G
Sbjct: 177 QPLRPLAQSACMSALGLAMAAPAALLEAPWPGGLPPGALSAVAYYAVVPTVAGFLLWYAG 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+R + + AP+ ++ S +L + I + + + V+ ++ +
Sbjct: 237 AERVSGAEAALFTAVAPVAALLLSAGVLGEQISSRQLLGVACVLASVFML 286
>gi|332534872|ref|ZP_08410694.1| permease of the drug/metabolite transporter (DMT) superfamily
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035671|gb|EGI72160.1| permease of the drug/metabolite transporter (DMT) superfamily
[Pseudoalteromonas haloplanktis ANT/505]
Length = 319
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 93/283 (32%), Gaps = 17/283 (6%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A LWG + + ++ + VI R+L +L +++
Sbjct: 5 LCLIIATFLWGSSFIALKYAIAIYDPALVIFLRMLTTLVLSLCL------WRFVIRFEYL 58
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ S +++ F +A+ P+I L V LKE ++
Sbjct: 59 KGDWKYLVGMSLAEPCLYFLFEGHAMEYTSASQAGVIVSCLPIIIALLAFVLLKEHISKA 118
Query: 147 QIIAALLIILSLLIMTL----------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ L I +++TL L L V + Y + K + S
Sbjct: 119 IVVGFTLCIGGSILLTLLSPSTDQAPNPLLGNFLELMAMVCAAFYTVSIKHLANRYSPLT 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I + ++ F L + + +++Y I + +
Sbjct: 179 LIALQGISGSLFFAPFLFFIDLPSENQHDLTALMSILYLGSCVTLGGYGMYNYAISKVSV 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T P+ ++ S IL + ++ + + +V I +++
Sbjct: 239 LTAAAYSNLIPIFTLILSAIILGEVLNVWQWLSIFVVFIGVMI 281
Score = 39.9 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 11/103 (10%), Positives = 33/103 (32%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + + + F + F + ++ S
Sbjct: 33 VIFLRMLTTLVLSLCLWRFVIRFEYLKGDWKYLVGMSLAEPCLYFLFEGHAMEYTSASQA 92
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G++ P+++ + + +LK+ I + F + + ++ L
Sbjct: 93 GVIVSCLPIIIALLAFVLLKEHISKAIVVGFTLCIGGSILLTL 135
>gi|312869968|ref|ZP_07730107.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
gi|311094553|gb|EFQ52858.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
Length = 305
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 98/297 (32%), Gaps = 11/297 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFA 70
+ N S M G + A ++WGI+ Q + Q + ++S R L + +
Sbjct: 1 MDNGNLSRQVMKGIGWAALASVMWGISGTVLQLISQNLAIPATWMLSTRTLITGVILLAI 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
G A+ ++ ++ L ++ F YA+ T + +++P+
Sbjct: 61 SFCIYG-KRTFDVFKTKETAISVVTYAIFGLMLNLLTFYYAVQTGNASAATILQYLSPLF 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCF 183
V L+ER IIA +L ++ +++ + LS + +A +
Sbjct: 120 IVLGDIFILRERPLRSDIIAFVLAMIGIVMCVTRGNLHSLSLPVVSLLWGLGSGITAAFY 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + + A +
Sbjct: 180 VVLPKRAVAKNPPLVVLGWGTMIAGVLFNLYRPMWVNPPHISTTLVLSVGTVILFGTILP 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F + + A V IM+ P++ V SV ++ V I +V++A+ +
Sbjct: 240 FGLLLHATNFAPSDVVSIMDALQPIVTSVLSVIFFHLFMNWVEIIGIILVLVAIYLL 296
>gi|239978126|ref|ZP_04700650.1| putative transmembrane protein [Streptomyces albus J1074]
gi|291450022|ref|ZP_06589412.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291352971|gb|EFE79873.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 347
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/304 (16%), Positives = 99/304 (32%), Gaps = 20/304 (6%)
Query: 21 LPTMMGT--LFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G A ++WG T L T QFL L + R L + A
Sbjct: 1 MRQRAGFDSALTVLAPVVWGSTYLVTTQFLPPDRPLLAAAVRALPGGLILTLA------- 53
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + +L A + + A G + + + PV + L ++
Sbjct: 54 ---GRKLPQGHWWWRILALGALNIGFFFYLLFVAAYHLPGGVAALVGSIQPVFVLLLSAL 110
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
L+E++ Q+ A +L + ++ L L ++ +A I + G
Sbjct: 111 LLREKIRSWQVGACVLGTAGVGMLVLGPEAGLDAVGVAAGLGGAACMAAGIVLTKRWGRP 170
Query: 196 -----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
LA+ L + G L F + + ++ G
Sbjct: 171 PGVGLLTFTGWQLAVGGLLIAPVALAAEGLPDRLTWPNFAGFAYLSLIGALLAYAVWFRG 230
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+R TV ++ + +PL V L+Q + V+ V+ A+++ + S
Sbjct: 231 IERLPALTVSLLGFASPLAATVLGYLFLRQGLTLVQGAGAVAVISAVLLAQRSSARESRV 290
Query: 311 NKTK 314
+
Sbjct: 291 ARKS 294
>gi|168335160|ref|ZP_02693267.1| hypothetical protein Epulo_08973 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 300
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 98/296 (33%), Gaps = 7/296 (2%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPG 66
+ +K K G LF+ + + + + + + + + + + R L SL
Sbjct: 1 MQTMNKSKLKFTRLNNRTKGILFILVSALSFALMSACIKIVGPLPIFQKVFFRNLISLFI 60
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
++ + K +L + I YA+ + +
Sbjct: 61 ATALVLKHKSSFVGKPENRKYLILRAVLGTAGIIF------NFYAIEKLVLSDATMLNKL 114
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK 186
+P+ + +FLKE +N QI+A + L L++ S + I+ A
Sbjct: 115 SPLFVILFSYLFLKEHINRNQIVAITIAFLGALLILKPSFNSDMIPGISGILGALSAGAG 174
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + V A A+ + F+ + + + + G+ +
Sbjct: 175 YTCLRILKTEPYYRTVFAFSAVSCAIVLPFAIYFYLPMTSFQFLTL-MLAGVFATITQFS 233
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ A + I +Y+ + + S F+ + D + I + ++ A + L
Sbjct: 234 LTLAYSFAPAREISIFDYSNIIFSAIISYFLFYELPDILSVIGYFVIFGASLYMFL 289
>gi|221642286|ref|YP_002533373.1| hypothetical protein BCQ_PI196 [Bacillus cereus Q1]
gi|221243221|gb|ACM15930.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 292
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/294 (14%), Positives = 99/294 (33%), Gaps = 15/294 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G+L++ A +WG + + L + LE++ R L ++ +
Sbjct: 2 KNTLLGSLYLILASSIWGGMYVVVKVLVSVIPPLELVWLRYLVAIVALLIIGFVTKQKWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + ++ A+ + + + TP V + L
Sbjct: 62 IEK-----RYFLIIIAIGVIGYAISIVTQETGTMLSSAQMGAIITSSTPAFMVVFAWLIL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
KERL + I+ L + ++I+ GI LL A+ + R
Sbjct: 117 KERLTFKKGISVCLATIGVIIIVGIGDLNMSNMLGGISLLIAALTWALMSVLVKRLPSDY 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
V I +V+ + L + + F +++ G
Sbjct: 177 SQIVVTTYSTLVALIVLTPFVLPRLHAIDVSQLTRPTIWGGLLYLGIISTAVAFLLWNRG 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ S+ G+ + P++ + IL + I + +++I +++ +
Sbjct: 237 LQMLNASSGGLFFFFQPVVGTLLGWLILGEKIGVTFWVGSTLILIGVLLVIREK 290
>gi|118444870|ref|YP_878777.1| integral membrane protein [Clostridium novyi NT]
gi|118135326|gb|ABK62370.1| Integral membrane protein, putative [Clostridium novyi NT]
Length = 297
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/277 (9%), Positives = 89/277 (32%), Gaps = 13/277 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G ++ + +G P++ + V++ R L + +F +
Sbjct: 1 MKRINGIIYALLSSTAFGFMPIFAKVAYNHGSNCFSVLTFRFLIAALILFVYFMIKKIDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + + L + +FV P + + +
Sbjct: 61 KI-----NKKQLNEVFLIGSIGYTSTGIGLFLSYKYISVGLATTMHFVYPAAVILMSYIL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
K+ +++A + + + ++ +G + L + +T++A A +
Sbjct: 116 YKDNFTKNKVLALIFSLAGVYVLAGKAGQCINPLGVSLAILSGLTYAACIIAMNKEEIKE 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + ++++ + + L + +F +K
Sbjct: 176 LDNTVVVFYFSLFSGITLLIFSLLTKNFVVTFDLYANVSILGISVISTIAATVLFIKALK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
S+ I+ P++ I+ + + K+ + +
Sbjct: 236 IIGASSTSILATCEPIVSIIMGILLFKEKLTSAIIFG 272
>gi|313894845|ref|ZP_07828405.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976526|gb|EFR41981.1| putative membrane protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 292
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 94/289 (32%), Gaps = 6/289 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + + A + WG T + +E + + R + + + G +
Sbjct: 1 MGNLRGVMMLLTASLFWGTTFVAQVVGMEGLGPYTYAALRFTLGAACLTLLWLLYRGKRT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + + V ALL T+F ++ V +G+V L
Sbjct: 61 QMRRAGTYRSGFRAGLPVGLAMFVGVTMQQVALLYTTAGKTAFIT-TLYIVLVPIGAVLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK----TIPVGSSEG 195
+R+ + I ALL L + ++ + L + V SA+ + + + +G
Sbjct: 120 GQRIRAVNWIGALLAFLGVYFLSAYGSFDLNIGDVIVFVSAFFWMAQILLIDRFASAVDG 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + + V + L G + G +
Sbjct: 180 IELCLVQILVCVVGSTVLAVLYETCTWAAVVGAAVPILYGGIFSCGVAYTCQILGQAYVR 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ + V+ IL + + + +++ ++ +P
Sbjct: 240 PAQAAVILSLEAAIAAVTGWLILGEVMSAAQLGGCALLLAGALITQIPA 288
>gi|328545060|ref|YP_004305169.1| transporter permease [polymorphum gilvum SL003B-26A1]
gi|326414802|gb|ADZ71865.1| Putative transporter, permease protein [Polymorphum gilvum
SL003B-26A1]
Length = 315
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/303 (15%), Positives = 96/303 (31%), Gaps = 16/303 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYF 74
+ T+ G + + A ++ + + ++L V LE+ R +
Sbjct: 4 APSTPADTLRGIVLMTAAMLIVPLMDIVAKYLSAVLPPLEIAFGRFAFQGAFAVLTAAIG 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G +L + + +LA F A+ +FV P+I L
Sbjct: 64 PGFAALRTRRWR------ANLLRGVLLAGATFAFFTAVKVMPVADAIAIFFVEPMILTGL 117
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+VFL+E + + IA + + L++ +A+ +A+ FA +
Sbjct: 118 SAVFLRETVGFRRWIAIAVGLAGALLIIRPGFAEFGPVAVLPLVTAFLFALYLLITRHLS 177
Query: 195 GFFIEMCVLAIPALF---------YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
G + + AL VV + E L +P+ L G ++ F
Sbjct: 178 GEDSMLSIQFTTALGGAAVLGAALLVVGATGATAEPLVLPGVPELGLLAVIGAISFFAHG 237
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ A S + Y + + + D ++V + +
Sbjct: 238 LIVRAFALAPASVLAPFNYLEIVSATLFGFLVFGDFPDLPTWGGIALIVGSGLYIAHRER 297
Query: 306 INS 308
+ +
Sbjct: 298 VRA 300
>gi|331082042|ref|ZP_08331170.1| hypothetical protein HMPREF0992_00094 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405637|gb|EGG85167.1| hypothetical protein HMPREF0992_00094 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 294
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 86/292 (29%), Gaps = 20/292 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L +WG T + T+ L+ + +E++ R L +
Sbjct: 2 KENAKGHLLALFTICVWGTTFIATKVLLKAFTPIEILFMRFLIGYFLLLLM-------NR 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-SVF 138
+ + + T + ++ AL P + LG
Sbjct: 55 QGLSVSNKKQELYFIGAGLTGVTFYFLLENIALTYTYASNVGIIIATAPFFTAILGRMFL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP--------- 189
+E+L + L I ++++++H +
Sbjct: 115 KEEKLKTGFFVGFLTSITGIILISIHGSSAFSLNPKGDILAFLAAFVWACYSVLVKKIGS 174
Query: 190 --VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + + V GF F I L ++ F +
Sbjct: 175 FGISIIQSTRHIFFYGILFMIIPVFLMGFEWKLERFSNPIYLGNMLFLGVGASALCFVTW 234
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +K + Y +P++ I++S IL + I + I G+V +++
Sbjct: 235 NLAVKLLGAVRTAVYLYLSPVVTILASAIILGEKITVISVIGAGLVFAGLLL 286
>gi|260575294|ref|ZP_05843294.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
gi|259022554|gb|EEW25850.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
Length = 307
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 93/291 (31%), Gaps = 5/291 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G L + +L+ + + V E + R ++LP + ++ +
Sbjct: 1 MRPLRGILLKLVSGVLFIAMSALIKATAQHVPPGEAVFFRSFFALPVIVVWLLLRRELST 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ L+ + G L + ++FLG
Sbjct: 61 GLRAQNPIGHVWRGLMGIMAMGLGFAGLGYLPLPEVTAIGFAAPLLTVVFAAMFLGEEVR 120
Query: 140 KERLNHLQI-IAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEG 195
R++ + + +A +LI+L+ + G + A+ V A A + V
Sbjct: 121 AFRISAVVLGLAGVLIVLAPRLSVASGGAAGQAEALGAVLVLGGAVFAALAQVFVRKLIL 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ +L V + + + L + L+ G+L F + + A
Sbjct: 181 TDRTPTIVFYFSLTGSVLSLVTLPFGWVLPTPTEGALLVMAGILGGFGQIFLTSSYREAD 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S V +Y + L + + + +VV A ++ +
Sbjct: 241 ASVVAPFDYASILFALAIGYWGFGEVPSWSMLGGAALVVTAGILIIWRERK 291
>gi|237750136|ref|ZP_04580616.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229374323|gb|EEO24714.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 306
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 101/305 (33%), Gaps = 9/305 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
M G LF+F A + + + + L+ +S +E+I R +++ + ++
Sbjct: 1 MRQSAMSGILFMFAASLTFSLMNACVKLLDSMSSMELIFFRHVFTAICIGIWWCFYPPFK 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K K ++ + Y + T S P+ V +F
Sbjct: 61 PDSKPRKKGGYFRLLMRSLT--GGLAMLAMFYNIATISLGTASAFAQTMPIYIVLFTLLF 118
Query: 139 LKERLNHLQIIAALLIILSLLIM-------TLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
KE + I+A ++ + ++ + I + + AY +
Sbjct: 119 TKEHVRLPIILATMIGFVGVICICDIRTESLGIDNIIAGIINGIMMALAYMSLKDLKEYF 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + ++ F + N+ + + ++ G+L + +
Sbjct: 179 NESSMIMGFAITMAVVGGVFMFIEIPHLSGFSIPNVREWIGILILGILGTLGQMFLTRAF 238
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
A + ++Y + ++ V + + + +++I+ V+ +P + K
Sbjct: 239 ILAPAGLISPLDYMRIVWGVIFGVMLGDSLPNMMTLSGITLIIISGVLIAMPVFLQDYKK 298
Query: 312 KTKKS 316
KS
Sbjct: 299 YKNKS 303
>gi|295704300|ref|YP_003597375.1| hypothetical protein BMD_2172 [Bacillus megaterium DSM 319]
gi|294801959|gb|ADF39025.1| integral membrane protein (DUF6) [Bacillus megaterium DSM 319]
Length = 294
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 94/281 (33%), Gaps = 10/281 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + CA +LWG T + + + + R+ + A + K ++
Sbjct: 8 ILILCAAVLWGTTGTAQALASAEAHSVAIGAVRLAVGGLSLLAACLIQKK-----KVDVR 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + V +A++ A FF + T T + P++S L + +++
Sbjct: 63 NLPILPLTVAAASMAAYQPLFFSAVIKTGVAVGTMVAIGSAPLLSGVLDYIVYRKKPTKK 122
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV---- 202
++A I+ + L + + + + A V ++ V
Sbjct: 123 WLLATFTGIIGCCSLLLKKDSQIDVIGLGMAIGAGASFACYTTVNKKIVQHVDPQVGASL 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ A ++ F + + + L L + + +FS +K ST +
Sbjct: 183 VFTAAAVLLIPCWFMYDMSWLVSLNGMGIALHLGILTTALAYVLFSTALKSVHASTAVTL 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + VF L + + V +V ++
Sbjct: 243 SLAEPVTAFLLGVFFLGESLTLVNICGAALVFASLAFLTYS 283
>gi|149199043|ref|ZP_01876083.1| hypothetical protein LNTAR_24079 [Lentisphaera araneosa HTCC2155]
gi|149137832|gb|EDM26245.1| hypothetical protein LNTAR_24079 [Lentisphaera araneosa HTCC2155]
Length = 284
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 93/272 (34%), Gaps = 1/272 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
V A ILWG + +Y + + + VL + R L ++ + +L+ K
Sbjct: 7 VILASILWGASGVYVKEADNMPVLAMAFFRSLIPSLFIYIFLKTRKAPQKILRKNHK-WM 65
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ + SA + F + Q L S+ + + F+ +++ L +
Sbjct: 66 LLSSSLNSARTVLFFISFAYTTIGNAQITLYSWPIWAAILAYFFMKEQLSLTQVSLLCLT 125
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
LI + + + +A + I E + E V A+
Sbjct: 126 FIGLIFIFIQNELSFDDHNFIGIAAMALSAFLHSCSVIIFKKYGEEYRSEEIVFYQNAMT 185
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
++ F L + + F +F +K+ K ++ + Y PL
Sbjct: 186 PLLLFAFCIPLFPELSTKQVIIASSFGFINGIIAFSLFFSALKQMKTASAAQITYIEPLC 245
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ F+ ++ I+ ++ I +++ +
Sbjct: 246 GLLWGYFLYQEQINLMQIIGGSLILGSTFALS 277
>gi|253572117|ref|ZP_04849521.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251838297|gb|EES66384.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 303
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 15/298 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A +G+ PL+T + +SV V+ +R +++ + +
Sbjct: 2 NNKTKGFIYGAIAAASYGMNPLFTLPLYAAGMSVDTVLFYRYAFAVIVLGVLMKLQGQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K + + + + + + S FV PV+ + F
Sbjct: 62 TLRKADILPLVIM------GLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVAVIMGAF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
KE+++ + + + LL + + ++ G + L +++++ Y +
Sbjct: 116 FKEKISAITVFSILLALSGIALLYQGDGNKPLSTVGIIFVLLSSLSYAIYIVGVNRSSLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y+V + F + L L + + I
Sbjct: 176 TLPTTKLTFYAILFGLSVYIVRSNFCTELQIIPSPLLWADVLALAILPTAVSLICTALAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + I+ P+ + V + + + + +++ A+ + ++ +
Sbjct: 236 QSIGSTPTAILGALEPVTALFFGVLLFHEKLTPRLMVGILMIITAVTLIIIGKSLIKK 293
>gi|284031872|ref|YP_003381803.1| hypothetical protein Kfla_3953 [Kribbella flavida DSM 17836]
gi|283811165|gb|ADB33004.1| protein of unknown function DUF6 transmembrane [Kribbella flavida
DSM 17836]
Length = 303
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 90/291 (30%), Gaps = 13/291 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MG + + +G ++ + + V V++++ R + + + +
Sbjct: 1 MGPVLCLLSAACFGAMAIFGKFGYDAGVGVVDLLLVRFAIAAALLLAIAGTTGALRGVPR 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V L A G F AL L + ++V P + + V +ER
Sbjct: 61 -----RSVVAGLALGGIGYATQSGLFFGALERMNASLLALIFYVYPALVTIVAIVLRRER 115
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVGSSEGF 196
+ ++ A L+ + ++ + L A +
Sbjct: 116 ASSRRLAALLIASIGTALVLGGAATGDLDRWGAALGFGAAVAYTVYILAGDHVGAGTPPV 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ V A + + + GG + F G+ R
Sbjct: 176 ALSALVCTGAACTFAIVSAGHGGPQLDFAPSGWLWLTAIAVVSTVAAILAFFAGMARVGP 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
ST I+ P++ +V + + + + +V+ + V+ A++V P
Sbjct: 236 STASILSTLEPVVTVVLAAMLFTESLSSVQLLGGACVLGAVLVIQWPQRRR 286
>gi|193596709|ref|XP_001949581.1| PREDICTED: transmembrane protein 20-like [Acyrthosiphon pisum]
Length = 339
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/306 (11%), Positives = 95/306 (31%), Gaps = 2/306 (0%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL 64
+T + ++ + ++G L + + + ++ L ++L+ + LE+ + R + L
Sbjct: 18 STSSPVTPNVTSSPKTQIKILGLLLAAISSLFFSLSTLIVKWLDDIDPLELAAFRFVGIL 77
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
++Y L S +++ A + F
Sbjct: 78 IPSVPILIYNKQNPFPKGQRLMLLLRAFAGATSVSLIFYAIRHMPLADASVIVFSVPVIV 137
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA 184
+ I + L +I LLI + + + +A S + A
Sbjct: 138 AIFARIFLKEPCGLFHYFTLFLTMIGVLLITRPPFLFGQSTKQYNILGPLAALLSTFFGA 197
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
I + + + + ++ + ++ G + + + +I G +
Sbjct: 198 IVYILLRALKNLHFSVIMVTFATYSIIQTTSMAWATGNLCWPKCGTERILVIALGAFSFS 257
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + + V I + V + + + I +V ++V+ L
Sbjct: 258 GQMLLTIAAQLEEAGLVAIARTVDVVFAFVWQIIFFNEVPNIFSIIGAVLVTSSVVLIGL 317
Query: 303 PTVINS 308
+ S
Sbjct: 318 RKWMMS 323
>gi|170700734|ref|ZP_02891728.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria IOP40-10]
gi|170134341|gb|EDT02675.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria IOP40-10]
Length = 319
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 85/290 (29%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P ++ +
Sbjct: 2 KTRLIGYLYLAAAMAGVGSTVIASRLAAGGLPPFAATALRFLIATPLLYGLMRAQRMRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ AV ++V +A + I P +S + ++ L
Sbjct: 62 RICA----RDAVLLVVQAAAGGVGYTVLLISGTKLSSPIDAGVMLGTLPAMSTLIAALVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
+ER AA L +L +T G + SL AV A
Sbjct: 118 RERQTPRDWGAAALATAGVLFVTFAPGQAMPSLRTLAGDALVLAAVACEAVFILLNRRLS 177
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L V + + + +
Sbjct: 178 TPLPPLALSTAMSGLGFMLALVPAAFEWHALAAGWTVGAISAIAYYALVPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + + + +VV M+V
Sbjct: 238 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLGGTQLLGIALVVTGMLV 287
>gi|317476044|ref|ZP_07935296.1| integral membrane protein DUF6 [Bacteroides eggerthii 1_2_48FAA]
gi|316907682|gb|EFV29384.1| integral membrane protein DUF6 [Bacteroides eggerthii 1_2_48FAA]
Length = 304
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 92/292 (31%), Gaps = 15/292 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + A +G+ PL+ L V V+ +R +++ + +
Sbjct: 1 MTNDRLKGFTYGALAAASYGLNPLFALPLYGAGMKVDSVLFYRYFFAIVMLGILMKVKKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L K + + + + F + + S FV PV+ + +
Sbjct: 61 SFALKKTDILPLAVM------GLLFSFSSLFLFESYNYMDAGIASTILFVYPVMVAIIMA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIP 189
+F E+++ + + + L + ++ L + ++T++ Y
Sbjct: 115 IFFHEKVSFITMFSIALAFTGISLLYEGGDGGTLNLLGVLFVILSSLTYAIYIVGVNRSS 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + L + YVV F + +
Sbjct: 175 LKNLPTAKLTFYALLFGIIIYVVRLDFCTALQPVPAPLLWVNVFSLALFPTIISLIAMTL 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I R + I+ P+ + V + + + + +++ A+ + +
Sbjct: 235 SIHRIGSTPAAILGALEPVTALFCGVVVFGEQLTPRIMLGVLMILTAVTLII 286
>gi|154502736|ref|ZP_02039796.1| hypothetical protein RUMGNA_00550 [Ruminococcus gnavus ATCC 29149]
gi|153796619|gb|EDN79039.1| hypothetical protein RUMGNA_00550 [Ruminococcus gnavus ATCC 29149]
Length = 306
Score = 76.9 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/291 (9%), Positives = 84/291 (28%), Gaps = 17/291 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++WGI ++ + L + E+ + F +++
Sbjct: 2 NNRTKGISLAIITAVMWGIMGMFVRGLTGYAFTTFEISFFLCALAGGAYFLFLLFTKPS- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ V L++ A ++ + + A+ + + F++P+ LG
Sbjct: 61 ---ALKINLKGLVICLLYGAVAYSISFVSYSVAVSRIPVGVATVLMFMSPIWVAILGRFM 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-----------LLSLAIAVTWSAYCFARKT 187
E+L +++ L+ ++ + + G + + V
Sbjct: 118 FGEKLPKSKMVTILICLIGAVFVANLIGGGDIKLDGIGILAGVINGVGVALQILLPKYFA 177
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
A+ +F + + S + L
Sbjct: 178 KDYERDTLLVYGFLGAAVVLMFGMDFGAVSSHMSSTPTGVLLWNLFGIGILCTMVANVSC 237
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + +T I+ ++ + + + + ++ + I+V+ +
Sbjct: 238 VKSTQYVEATTTSILSALEVVVGTLVGFVVFHEHMTMLQILGAVIIVVGAI 288
Score = 40.7 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 46/126 (36%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
AV W + + + F I + A+ Y ++ F+ + + L+
Sbjct: 15 AVMWGIMGMFVRGLTGYAFTTFEISFFLCALAGGAYFLFLLFTKPSALKINLKGLVICLL 74
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ S F +S + R + ++ + +P+ + + F+ + + + + I +
Sbjct: 75 YGAVAYSISFVSYSVAVSRIPVGVATVLMFMSPIWVAILGRFMFGEKLPKSKMVTILICL 134
Query: 295 IAMVVY 300
I V
Sbjct: 135 IGAVFV 140
>gi|218890585|ref|YP_002439449.1| putative permease [Pseudomonas aeruginosa LESB58]
gi|254241910|ref|ZP_04935232.1| hypothetical protein PA2G_02631 [Pseudomonas aeruginosa 2192]
gi|126195288|gb|EAZ59351.1| hypothetical protein PA2G_02631 [Pseudomonas aeruginosa 2192]
gi|218770808|emb|CAW26573.1| putative permease [Pseudomonas aeruginosa LESB58]
Length = 299
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 96/292 (32%), Gaps = 9/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +L+G+T ++ + L S ++ R L+++ +
Sbjct: 1 MNRRSALAALHGGALLFGLTGVFGK-LASASPGVIVFGRALFAVLALGLFARLVGQAWRA 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L P L +LA HW F A+ T + + + P +V L + +
Sbjct: 60 L-----GPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFR 114
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER++ + + +L+ L L+++T + L L A+ +S
Sbjct: 115 ERIHLAEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLANRSNSGQVG 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F+ GE L + + +F + K
Sbjct: 175 PVQAALWQNLVVALCLLPFAVGELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKAR 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T ++ P+ I + + + + ++++A+V+
Sbjct: 235 TAALVFALEPVYGIAFAWLLFHETPGPRMFLGGALIILAIVLSARLGARGRK 286
>gi|319786841|ref|YP_004146316.1| hypothetical protein Psesu_1237 [Pseudoxanthomonas suwonensis 11-1]
gi|317465353|gb|ADV27085.1| protein of unknown function DUF6 transmembrane [Pseudoxanthomonas
suwonensis 11-1]
Length = 306
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/288 (10%), Positives = 91/288 (31%), Gaps = 8/288 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ L + + L+G+ + + + EV R + L ++ GL
Sbjct: 12 LRAALLMLGSTALFGMMVVAIRLASASLHTFEVAFFRNFFGLLAATPLLLRHGPGLLRTA 71
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + S +A+ + TP+ + + L E+
Sbjct: 72 HFPRYLFRCLVGICS-------MLAGFWAIGHLPLAQAISLSYSTPLFATIAAAAMLGEQ 124
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A +L + +L++ + + +A A I + +
Sbjct: 125 VRARRWAAVVLGFIGVLLIVRPGSTGFSTGTLVAVMAALLSAIVAIQIKQLSATEPADRI 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L +V + + +++ G+ + +++ +K ++S + +
Sbjct: 185 VIWTTLLWVPMSLVPALGVWTWPQGITWVWVAAAGVFGTGGHMLWTRALKLGEVSALTPI 244
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ V + + +D +++ A + + +
Sbjct: 245 GFMQLPIVAVFGWLLFDEVLDGWTLAGALVILAANAYIAHREAVLARR 292
>gi|282882682|ref|ZP_06291292.1| transporter protein [Peptoniphilus lacrimalis 315-B]
gi|281297495|gb|EFA89981.1| transporter protein [Peptoniphilus lacrimalis 315-B]
Length = 300
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 86/294 (29%), Gaps = 5/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ + A I+WG + + V L R L + F +
Sbjct: 2 SRELKSTIMLLTAAIIWGFAYVAQVSGMSHVGPLTFNFARFLVGGVFLIIIYNIFKRTIP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + +L L T ++ + L F
Sbjct: 62 YYKNEIYSLNKTIKYGVICGLLLTVGNNLQQLSLLGTSAGKVGFLTSTYIVIIPLIQFFF 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT----WSAYCFARKTIPVGSSEG 195
+R+++ I + + + ++++ + + S I V + A E
Sbjct: 122 GKRISNRIIFCIFIAMCGVYLLSVKENLSINSYDILVLVSVLFFAIHIMIMATCPDDCEK 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ M + ++ ++ L + + + + K
Sbjct: 182 ILVSMIQFFVTSILSIILAFLFEDIVIINLFKAYKEILFVGIISSGIAYTLQMLAFKDID 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + ++ + L Q ++ I++IA VV LP+
Sbjct: 242 PTIGSLVASLESVFSVIGAWIFLNQRMNLREISGCVIILIATVVAQLPSKGKRK 295
>gi|224052579|ref|XP_002189525.1| PREDICTED: similar to transmembrane protein 20 [Taeniopygia
guttata]
Length = 468
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 98/307 (31%), Gaps = 22/307 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + L+ + L + +E V +EV + R ++ + V ++Y+
Sbjct: 166 LGLFYTILSAFLFSVASLLLKKIEDVHSVEVSAFRCVFQMAFVLPGLIYYK------TGF 219
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L L F + + YA + F +PV + L +FLKE+ +
Sbjct: 220 LGPKGKRIFLFFRGFLGSTAMVLLYYAYQVMSLADATVITFTSPVFTSLLAWIFLKEKYS 279
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC----------------FARKTI 188
++ L + ++++ + + +
Sbjct: 280 LWDLLFTLFAVTGVILIARPPFLFGSHVTGIEGSYSDHLKGTIAATASTLSAASTIVILR 339
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
VG S +F+ + A+ L V F E D +FLI GLL +
Sbjct: 340 KVGKSVHYFLSIWYYAVIGLIGCVITLFVLNEWRLPHCGRDRVFLILIGLLGLGGQIFLT 399
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K V IM + + V L VV + + +S
Sbjct: 400 KALQIEKAGPVAIMRTMDVVFAFILEVLFLNHLPTWWTVGGALCVVASSSGTAIRKWRHS 459
Query: 309 GKNKTKK 315
K ++
Sbjct: 460 VKKAKQR 466
>gi|164687335|ref|ZP_02211363.1| hypothetical protein CLOBAR_00976 [Clostridium bartlettii DSM
16795]
gi|164603759|gb|EDQ97224.1| hypothetical protein CLOBAR_00976 [Clostridium bartlettii DSM
16795]
Length = 323
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 91/296 (30%), Gaps = 14/296 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + I+WG T + + +S + + R + + +
Sbjct: 14 LCLIVCSIIWGSTFVVIKDATNTMSSGFINASRFTIAAVILLAVYF-------KKIKNIN 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++ + ++ + +F V+ FL K+ +
Sbjct: 67 KSELKHGIIMGVALFGGYYLQVLGMEYGSTAGKCAFLSATFCVMVPFLSWGVFKKVPDKY 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIEM 200
+IAA+L I+ + ++++ +G + + SA+ +A + +
Sbjct: 127 SVIAAILCIIGVALVSIENGAHITVGDGIILISAFFYAVNIMFTSEFSTRENNDTIILAF 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+A+ + + G + + + G+K ++
Sbjct: 187 LQIAVVGILSWIVVLIKGEMPQVYHARAVMGVVYLGIFATALCLLMQVIGLKHINSTSAS 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
I+ + ++ S+ + + F ++ I ++V K KKS
Sbjct: 247 IILSLESVFGVMISIAFYNEVVTPKLMAGFVVIFIGIIVCETKLNFLKQKISIKKS 302
>gi|308798669|ref|XP_003074114.1| COG0697: Permeases of the drug/metabolite transporter (ISS)
[Ostreococcus tauri]
gi|116000286|emb|CAL49966.1| COG0697: Permeases of the drug/metabolite transporter (ISS)
[Ostreococcus tauri]
Length = 344
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 8/270 (2%)
Query: 40 TPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSA 98
+ ++ + V +V+ R L++ + +V V + + +
Sbjct: 82 NDVIMKYTGSNLGVAQVVFLRFLFATLTMVPVMVAMGKE-------SWKTDRVPLHIARS 134
Query: 99 TILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL 158
+LA ++ L + + F P+ ++ L +FLKE ++ + I L+ +
Sbjct: 135 ALLAGGIFMYVKGLTIAPIAVVTTLNFTIPLFTLVLARIFLKETVDATRWIGTLVGFAGV 194
Query: 159 LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
I+ G + + V SA FA + G ++ ALF +
Sbjct: 195 TIVMQPGGAVFNPMWLVVLLSATMFASLDVLNKVFIGKESFWAMIFYTALFTTCIVAYPA 254
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ + + G + + S + YT +L +
Sbjct: 255 LTSWVAPTMTQYGLMAILGAGANGLLYCLLKSFSMVDASALAPFRYTELILSAGVGFLLF 314
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + +++ + + + S
Sbjct: 315 GEVPAMSTFLGACVIIPSTLYVVWKENQKS 344
>gi|325972554|ref|YP_004248745.1| hypothetical protein SpiBuddy_2742 [Spirochaeta sp. Buddy]
gi|324027792|gb|ADY14551.1| protein of unknown function DUF6 transmembrane [Spirochaeta sp.
Buddy]
Length = 289
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 92/267 (34%), Gaps = 10/267 (3%)
Query: 37 WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
+G + + Q L ++ R G+ + S +T +G+LV
Sbjct: 15 FGSNGVIASHI-QADSLTIVFFRTTLGFFGLLLVHLLSSKSKHAATETK----QIGLLVQ 69
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
S + + W A ++S Y+ P+I + + V KE NH ++A LL+I+
Sbjct: 70 SGVYMGLGWASLYKAYTLIGVGVSSLLYYTGPIIVLVVSIVRKKEPYNHRILVACLLVIM 129
Query: 157 SLLIM-----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
+L++ + + VG G +C L L
Sbjct: 130 GMLLIQGDADLQGKSTQGMLYGLFSGCMYAVMVLTNRQVGKGSGLVHTLCQLGGSTLVVT 189
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ S + + L+ + ++ I L +V I+ Y P+ +
Sbjct: 190 LVIFLSHRFTYPQTAVSWLNILVLGLGNTALGCFLYFNSIAALPLKSVAILGYLEPVSAV 249
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMV 298
S+ LK+ + I +V+A +
Sbjct: 250 FFSILFLKESFGLEKLIGCACIVLAAL 276
>gi|296125622|ref|YP_003632874.1| hypothetical protein Bmur_0574 [Brachyspira murdochii DSM 12563]
gi|296017438|gb|ADG70675.1| protein of unknown function DUF6 transmembrane [Brachyspira
murdochii DSM 12563]
Length = 307
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 107/307 (34%), Gaps = 16/307 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S+ S G + A I+W + +FL ++ +E+ +R + + +
Sbjct: 1 MSENKTSNSNNAGYILAILAVIIWSGNFVAARFLTHLTPIEISFYRWIVTFIVLTP---- 56
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
F + + + +++ S + V F A T S ++P+I
Sbjct: 57 FCMKKLIKNIKYIKGRWIKVIIISILGVTVFNTFVYLAAHTSNATNMSLLATLSPIIMAI 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAY 181
+ + K +L Q + L++I+ ++I+ G + A+ +
Sbjct: 117 ISRIVWKTKLTINQKLGLLIVIIGVVILITKGSIDVLMNLKFAVGDLYMLFAVILFAVYT 176
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ S FF M ++ + L + ++ L + + ++
Sbjct: 177 LTLKVRPKEISQSAFFYLMVIIGLIPLIAAMIFKYASNNAHTLDTKSALILIYVGVFPSA 236
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F +++ I + GI+ P + +V +L + + + I +++ ++
Sbjct: 237 LGFILWNMAIAKIGAIKGGIIYDAIPFFSSLEAVILLHENLLISQVIGGILILAGIIYST 296
Query: 302 LPTVINS 308
+ I
Sbjct: 297 IGDKIKK 303
>gi|167755516|ref|ZP_02427643.1| hypothetical protein CLORAM_01030 [Clostridium ramosum DSM 1402]
gi|237734268|ref|ZP_04564749.1| integral membrane protein [Mollicutes bacterium D7]
gi|167704455|gb|EDS19034.1| hypothetical protein CLORAM_01030 [Clostridium ramosum DSM 1402]
gi|229382498|gb|EEO32589.1| integral membrane protein [Coprobacillus sp. D7]
Length = 289
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 103/281 (36%), Gaps = 11/281 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + +++G TP+ + + + + R L+ +P +F + +
Sbjct: 2 KTKGYFLTILSAVIFGFTPILAKITYSMGSNGITMAFFRHLFVIPILFLIMKCQRLPYKI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LKN VG++ + T+ A++ + + + +F+ P+ + + K
Sbjct: 62 TLHQLKNICLVGIIGNALTVAALYTSYSFIQVGSATV-----LHFLYPMFVSLICFFYYK 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT----WSAYCFARKTIPVGSSEGF 196
ERL+ I +L G L L +A+ ++ Y + + + S +
Sbjct: 117 ERLSKAVKICLGTASFGILFFIELGGSSFLGLFLALFSGITFAYYMVGIEKLGLQSLNPY 176
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + ++ ++ SG L + L + G++
Sbjct: 177 VLNFYFAIVISISLLMIGLISGQLELILPVEAYGYSFLIAVLTSIVGIICLQQGVRYLGA 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+T I+ P+ ++ + IL + + V+ I I++ A+
Sbjct: 237 ATASILSMFEPVTSVIFGIIILHEQLTIVKLIGCFIILSAI 277
>gi|332653333|ref|ZP_08419078.1| putative integral membrane protein DUF6 [Ruminococcaceae bacterium
D16]
gi|332518479|gb|EGJ48082.1| putative integral membrane protein DUF6 [Ruminococcaceae bacterium
D16]
Length = 307
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 91/296 (30%), Gaps = 12/296 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + + + GTL VF A +L+ I L + + + + R +L + +++
Sbjct: 14 MERGHDMTKSQKGTLCVFAAALLYSIGGLCIKLI-PWGGMAINGSRTAIALVVIGAYLIW 72
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L L A+G + + + FV + +F
Sbjct: 73 VKHPLRL-----NRWVALGAISVFGCNALFSIANKLTTAANTIVLQFTAPIFVLLITLLF 127
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
K + ++ ++ L + + G+ + ++ A F +P +
Sbjct: 128 FHRRPDKLDVITCVVVFGGVVFFFLDSLEMGGGLGNVLALLSGLAYAGVFLLNDMPDSDA 187
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + T L+ + + + + G+K
Sbjct: 188 ISS------VFWGDVLSAITGLPFLVKETDFSPTAITSLLVLGVFQVAVAYILLTIGLKT 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T ++ P+L + + + + I IV+ ++VY +
Sbjct: 242 TPPVTASLVSGIEPVLNPILVAVFYGEKMGPMALIGAAIVIGGVIVYNVCRAKKQK 297
>gi|330942248|gb|EGH44892.1| hypothetical protein PSYPI_22012 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 295
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 77/288 (26%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLS 79
+ G F+ A L+ +++L + ++ R + + + SG
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYVVHTLLMACIFMPSSGLRV 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + ++L FI + + L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATAVNFLAPL------LVTALSVPLL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ Q A ++ + ++I+ G + SA FA + F
Sbjct: 126 HERVTRGQWTAVVVGFVGVMIIIHPGGELFTPAILLPLSSALFFALYQLLTRLVSPFDSP 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + + + + FL+ G + + + A + +
Sbjct: 186 TTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAML 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 246 APFSYCQIVFAGLLGYLVFDHTPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|116254359|ref|YP_770197.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115259007|emb|CAK10116.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 289
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 103/292 (35%), Gaps = 7/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L AY+ + + L + V +++ R L L G G
Sbjct: 1 MKNSVSLGILLTTLAYMAFTFHDAIIKVLASTIPVWQILFFRSLTILVGCLAY------G 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + ++ + +L W + A Q + Y+ PV+ L
Sbjct: 55 RGKLVRQTMRSPIIKPMIARSILLLCAWLSYYSAASRLQLAEVTTLYYAAPVVGTLLAWF 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE++ + +A + + +LI G+ + +A +A + + +
Sbjct: 115 ILKEKVTPARWLAVGVGFVGVLIACNPIGLTISWPVYLALQAAVLWACAMVLLRKTSLHE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ LA+ +F++ G + + ++ LI G++ G+++A +S
Sbjct: 175 KTIIQLAVSNVFFLAMTGVAVIWTWRTPDMTQLALLIATGVVAGCAQFALFEGMRQAPVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ EY++ + + I + +++ A ++ ++ +
Sbjct: 235 VLAPFEYSSLIWAFLLGYLIWADIPTPNVVVGAAMILGAGLIIIVSEKLRRR 286
>gi|161506469|ref|YP_001573581.1| hypothetical protein SARI_04674 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867816|gb|ABX24439.1| hypothetical protein SARI_04674 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 295
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 6/289 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + + F + D K+
Sbjct: 1 MFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQ-RTRFHDAWKD 59
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L+ Q
Sbjct: 60 KKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCLFLKEKLSLFQ 119
Query: 148 IIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 120 AIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLWALPV 179
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+L +++ + + +F+ + L G+ +Y
Sbjct: 180 SLLIFIFSDAGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLAQYIE 235
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P L + ++ I + I+ + F V + + + + + K
Sbjct: 236 PSLQFLLAIMIFGEHINYAELLCFSAVWFGLFLCISENLYSHYLRSRLK 284
>gi|302867584|ref|YP_003836221.1| hypothetical protein Micau_3116 [Micromonospora aurantiaca ATCC
27029]
gi|302570443|gb|ADL46645.1| protein of unknown function DUF6 transmembrane [Micromonospora
aurantiaca ATCC 27029]
Length = 307
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 79/291 (27%), Gaps = 16/291 (5%)
Query: 40 TPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL--------LKDTLKNPK 89
++ + V ++ R + ++ ++ G T +
Sbjct: 1 MAVFGKLAYDAGVPPTSLLLVRFGLAAALLWLVLLTRPGLRRAAPGDAGGGRPATRRGRV 60
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
L A A F AL L + + PV+ + ++RL +
Sbjct: 61 VAVALGLGAIGYATQASLFFSALELMDASLLALILYTYPVMVTVAAVLLGRDRLTPGRGA 120
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP------VGSSEGFFIEMCVL 203
A + L++ L +G A+ A V + V+
Sbjct: 121 ALVAASGGTLLVLLGAGGAGFHPLGALLAFAAAVTYTVYILVSDTVVHRLAPVALSALVM 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + G G + F G++R ST I+
Sbjct: 181 TGAAGTLGARALVTDGVDLSFGWRGWFWLAAIAVVSTVVAMLAFFAGLRRTGPSTAAILS 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P++ + L + + + +V+ ++ V L + +
Sbjct: 241 TFEPVVTAALATLALGEALTLAQLAGGALVLSSVAVLQLRPGRVRRREQAA 291
>gi|222086862|ref|YP_002545396.1| hypothetical protein Arad_3539 [Agrobacterium radiobacter K84]
gi|221724310|gb|ACM27466.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 298
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 100/290 (34%), Gaps = 5/290 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G +V + + W + L+ + + ++ ++ R + + GVF Y G
Sbjct: 6 QQQYRLGVTYVALSALAWSTSGLFVRSI-HADLMTILFCRGIVAGLGVFALFFYIERGNG 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ +FS T + I ++ Y P ++ + VF+
Sbjct: 65 WRIIRSMRWPSLAATIFSTTAMIGG----IGSIYYTSIADAMVIYATVPFVTAGVAYVFI 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ER + ++A+++ ++ +L+M S A + V + +
Sbjct: 121 RERPSATTLVASVVALVGVLVMLSGEAEGDGSWLGKGLAVIMTLAVAGLAVIMRQHRDVP 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M + + + F + L + + ++ ++++G + +
Sbjct: 181 MLPAMALSAWLCSFVTFWFASPSMVSGHDLGLIVAFGLVQSAMGLSLYTFGSRLIPAADA 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ L + + L + + IV+ A+ ++L V +
Sbjct: 241 TLLTALEVPLTPLWTWMFLAELPSKATLVGGPIVLAALFGHILLEVRRNR 290
>gi|229816002|ref|ZP_04446324.1| hypothetical protein COLINT_03056 [Collinsella intestinalis DSM
13280]
gi|229808461|gb|EEP44241.1| hypothetical protein COLINT_03056 [Collinsella intestinalis DSM
13280]
Length = 340
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 83/296 (28%), Gaps = 11/296 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
+ + ++G + I WG + +L Q+ + ++S R L + IV
Sbjct: 46 NDREARRLIVGVVATLLGGIFWGFSGTSASYLFAHYQIDTIWLLSVRQLLAGAMFMVVIV 105
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F ++ M VF+A + + ++ A+ + VI +
Sbjct: 106 LFDRA-RFIQLLKNPRHLAIMAVFTAFGVFGNSFSYLLAVRLTNAGTATVMQCFQLVIIM 164
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFAR 185
+ ++ +L ++ L + A C +
Sbjct: 165 VYTCIVTHRLPRRRELAGVILAFAGAFLIATGGDPSTLVIPPEGLAVGFISAVGAACMSI 224
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ G I + I + + +
Sbjct: 225 VPTKILPIYGSSIVTGSAMFASGVVTSVFVRPWESVPAFDASGLIALAILIVVGSFLAYN 284
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ G+K ++ P+ V+S +L I F +++ + + +
Sbjct: 285 LYMQGVKDIGSVRASLIGTVEPVSATVTSALVLGTVFAPTDLIGFALIIAMVFLTV 340
>gi|148546639|ref|YP_001266741.1| hypothetical protein Pput_1399 [Pseudomonas putida F1]
gi|148510697|gb|ABQ77557.1| protein of unknown function DUF6, transmembrane [Pseudomonas putida
F1]
Length = 296
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 89/295 (30%), Gaps = 8/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + + +G+T ++ + S ++ R +++ + G
Sbjct: 1 MNHRTALGALHIGALFFGLTGVFGKLATSASPAIIVFGRAAFAVLALALFASLAGPGWQR 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +G ++ + ++ A+ + + + P +V L S+ +
Sbjct: 61 LSSQDTRRLLLGGVLLAGHWVSF-----FIAVKVGGVAIATLGFASFPAFTVILESLLFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER++ + + +L+ + L+++T L A+ S
Sbjct: 116 ERIHRNEAVLVVLVSIGLILVTPAFDLASEATGGLLWALLSGLLFSLLSLTNRAGSGRLP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F+ + + + +F + K
Sbjct: 176 AVQAALWQNLVVGLCLLPFAAPGLADVATLDWLWIALLGIFCTGVAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T ++ P+ I + + + + +++ A+V+ + +
Sbjct: 236 TAAVVFGMEPVYGIAVAWAVFAETPTVRMLLGGALIIFAIVLSSRLAAEQPPRQR 290
>gi|330871176|gb|EGH05885.1| rarD protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 343
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/198 (27%), Positives = 103/198 (52%), Gaps = 2/198 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + AY +WG++P+Y + + V +E+I HRVLWS ++++
Sbjct: 2 QAANPRRGYILGLSAYTIWGLSPIYFKAISAVPAIEIIIHRVLWSALFGSIVLMFWK-HP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+D NP+ + +L S T++A +W +++A+ + S Y++ P+++V LG +
Sbjct: 61 GWWRDLRNNPQRLAVLALSGTLIAANWIVYVWAVNNGRMLEASLGYYINPLVNVLLGMLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ERL LQ++A + + + +P +SLA+A+T++ Y RK PV + G
Sbjct: 121 LGERLRRLQMLAVAFATIGVAQQVWNVGSLPWVSLALALTFAFYGLIRKKAPVAALPGLV 180
Query: 198 IEMCVLAIPALFYVVWNG 215
+E +L AL ++ N
Sbjct: 181 VETWMLVPLALIWLTLNP 198
>gi|163737718|ref|ZP_02145135.1| hypothetical protein RGBS107_19343 [Phaeobacter gallaeciensis
BS107]
gi|161389244|gb|EDQ13596.1| hypothetical protein RGBS107_19343 [Phaeobacter gallaeciensis
BS107]
Length = 349
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 77/261 (29%), Gaps = 8/261 (3%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
+ L++ R +++ + + G+ + + +
Sbjct: 79 APLHPLQISFGRFVFAFLAISTLVAVRRPRF--------TAPHWGLHLGRTSFGWMGVTL 130
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
A+ + F+ PV + L L E + + AA++ +L +++ +
Sbjct: 131 MFAAVAYIPLADATAITFLNPVFGMLLAIPLLGETVGRWRWAAAVIALLGAMVLLRPTPA 190
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
++ +A + I + G + +L L V + +
Sbjct: 191 SFQPASLLALAAAAVMGLELIFIKRLAGREKPLQILWFNNLLGSVIASVAVIAVWQPPTA 250
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
++ G + + F G+ RA S V Y + + + + D +
Sbjct: 251 EQWALMVALGSMMACAQGCFINGMARADASFVAPFSYATLIFAAIYDFAVFAEAPDAITI 310
Query: 288 IVFGIVVIAMVVYLLPTVINS 308
+ I++ +
Sbjct: 311 LGAVIILAGAALLAWREGRLR 331
>gi|311746761|ref|ZP_07720546.1| transporter, drug/metabolite exporter family [Algoriphagus sp. PR1]
gi|126578440|gb|EAZ82604.1| transporter, drug/metabolite exporter family [Algoriphagus sp. PR1]
Length = 270
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 94/270 (34%), Gaps = 8/270 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A + + + + +++ + +E+I R +SL F + +
Sbjct: 1 MLLAGVFFALMNVSVKYIPHIPAIEIILFRSFFSLIFSFMLL--------RRQRVNIFGN 52
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+LV + +V F + L +++P+++ LG +KE++ +Q +
Sbjct: 53 NRKLLVLRGVVGSVGLISFFFTLQNIPLASAVTLQYLSPILTTLLGIFIVKEKVKPIQFV 112
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ L ++++ L A SA + + + ++ L
Sbjct: 113 FFTISFLGVMMVQGFDTRVNLLYAGIGFISALFSGLAYNVIRKLKNTEHPLVIIFYFPLV 172
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ G + D L L+ GL + + A +S + + Y
Sbjct: 173 TLPIAGVISFFTWVQPVGWDWLILLWIGLCTQTAQYFMTVAYQNANVSKISSLSYLGVFY 232
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ F + + I G++++ +++
Sbjct: 233 ALIFGFFFFGETYSLMAYIGMGMLLLGVIL 262
>gi|241890042|ref|ZP_04777340.1| transporter [Gemella haemolysans ATCC 10379]
gi|241863664|gb|EER68048.1| transporter [Gemella haemolysans ATCC 10379]
Length = 287
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 93/288 (32%), Gaps = 6/288 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+MG + + + + L+ + + ++ R + ++ ++ +
Sbjct: 3 KKNNILMGIFCIILSGFGFSLMALFIKLAGDLPSMQKGFFRNIIAVGISSIPLIKHWKNI 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L + + + +F L + YA+ ++ ++P + + L +F
Sbjct: 63 NLPSNKVSWSVLISRSIFGTIGLVFN----FYAISHISLADSTIIQKLSPFVIIILSYIF 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KER+ Q IA ++ + + + +G L+S + G
Sbjct: 119 FKERMTKFQFIAIVIAFIGVGFIIKPTGDGLISTGALAALLGAFCSGIAYTCVRYLGTHN 178
Query: 199 EMCVLAIPALFYVVWNGFSGG--EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I + + + + LI G + ++ K A
Sbjct: 179 VSGEFIIFFFSSLSTILLLPYLIFDYRVMTMYQLSMLILAGASATIGQYGVTFAYKYAAA 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + +Y+ L + + D I + IV+ ++ ++ +
Sbjct: 239 KNISVFDYSQVLFSGILGFIFFSELPDLQSLIGYIIVISVGIILVIKS 286
>gi|239834057|ref|ZP_04682385.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822120|gb|EEQ93689.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 303
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 95/285 (33%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F +Y + ++ +FL+ +S EV + + F+ +
Sbjct: 2 LYGIFLAFASYAAFAVSDACVKFLDGTLSPYEVAFF-----GAVLGLLAIPFTKKADDVW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L VFLKE+
Sbjct: 57 LDMFRTTNIQMWLLRTVTAAMGTIGSVTAFTHLSMAEAFALIFLLPAYVTILSVVFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A L+ + +LI+ L + + A I + +
Sbjct: 117 VGWRRWSAVLIGFVGVLIVLRPGFRELSIGHLGALAAGMGGAMSIIIFRVMGKQEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G F N ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLIGPIIICGALMAPSFEAPNTEQWIYLAGYGLLAALANILLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ IDT I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDTPMMIGIVLITISGLFTFIRERQR 281
>gi|90420292|ref|ZP_01228200.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335626|gb|EAS49376.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 294
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 88/285 (30%), Gaps = 6/285 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L F +Y + + + + + E+ +++ F+
Sbjct: 4 GILLAFASYFAFACGDASLKAIGDRLPIFEIGFFVSIFA-----LLPALFTKRPEDNWGN 58
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ P G++ + + A + F+ P+ V LKE +
Sbjct: 59 VFVPNRPGLVALRMASGTLGGILGVIAFTSLPLAEAYALIFLLPIFVTVFSFVVLKEPIG 118
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +A + ++ +L++ +L A A C A I + + ++
Sbjct: 119 WRRWLAVIGGLIGVLLVVRPGFREILPGHFAAIGVAICGAITVIVLRVLGPSERRITLIG 178
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +V NG F + +I GL + + + A + V +Y
Sbjct: 179 AVLVAAIVVNGVLMVPDFEIPANDLWPIMILAGLCAGMGHLLIVFATRLAPAARVAPTQY 238
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + + D + I +V + + + +
Sbjct: 239 SQIVWATIIGASFFSEFPDLIAIIGMVLVAASGLFTFVRETERTR 283
>gi|16077583|ref|NP_388397.1| permease [Bacillus subtilis subsp. subtilis str. 168]
gi|221308343|ref|ZP_03590190.1| hypothetical protein Bsubs1_02908 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312665|ref|ZP_03594470.1| hypothetical protein BsubsN3_02884 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317588|ref|ZP_03598882.1| hypothetical protein BsubsJ_02843 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321864|ref|ZP_03603158.1| hypothetical protein BsubsS_02914 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|3123125|sp|P96661|YDED_BACSU RecName: Full=Uncharacterized transporter ydeD
gi|1881324|dbj|BAA19351.1| ydeD [Bacillus subtilis]
gi|2632816|emb|CAB12323.1| putative permease [Bacillus subtilis subsp. subtilis str. 168]
Length = 319
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 96/296 (32%), Gaps = 11/296 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ MG +V WGI + L Q+ V +++ R+L + + ++
Sbjct: 3 TSNRRMGLFYVITGATCWGIGGTVAKKLFQEYQIDVNWLVTTRLLTAGMLLLMLQLFRKD 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+++ A +L+F + ++ ++ + + +++PVI +
Sbjct: 63 RSQVIEVWKHKASAGQLLIFGLLGMLAVQYTYMASIQHGNAAVATLLQYLSPVIVIIYTL 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKTI 188
+ + L II +L ++ + + + LS+ A A+
Sbjct: 123 LRKQTVLTKQDIITVVLALVGCFFLLTNGSMSQLSVPAAAVVWGVLSGFAAAFYTLYAVG 182
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + I + + L L F F
Sbjct: 183 LLNKFDSLVVVGWAMIIGGFALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFI 242
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ ++ PL +V++V LK P + + I ++ ++ L
Sbjct: 243 KSLESLSPKETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALHK 298
>gi|251783226|ref|YP_002997531.1| drug/metabolite transporter superfamily protein [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242391858|dbj|BAH82317.1| drug/metabolite transporter superfamily protein [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 313
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 108/302 (35%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ G+L V A + WGI+ Q+L V + S R++ S + +++
Sbjct: 2 SKTVKGSLMVLLAGLAWGISGASGQYLMAHGTDVHLLTSLRLMISGVVLTALVLWRHKE- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +L++S L ++ ++ A+ + +++P++ + S
Sbjct: 61 KVIALVTTKKHFKELLIYSLLGLGLNQYAYLMAIRYSNAGTATVLQYLSPILVLIFVSAT 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVG 191
K + +A LL IL +IM H + L + + K + +
Sbjct: 121 AKRLPTITESLAILLAILGTVIMACHGDLSHLAIRPIGLFWGVFSALTYAYCVIKPVNMI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G I + + + + L + G+ F + F G
Sbjct: 181 KTWGSLIVIGLAMLMGGVVFPIVTRAWRYPLMLTVGNLVALIGIIGIGTIFAYTFFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + ++ ++K+ + + ++++A+++ ++ K
Sbjct: 241 SLIGPVKATLLASIEPVASVFFAIVLMKELFYVIDLLGMALILVAVLLISFRDLLLYQKE 300
Query: 312 KT 313
+
Sbjct: 301 RR 302
>gi|229000675|ref|ZP_04160198.1| Permease, drug/metabolite transporter superfamily [Bacillus
mycoides Rock3-17]
gi|228759075|gb|EEM08098.1| Permease, drug/metabolite transporter superfamily [Bacillus
mycoides Rock3-17]
Length = 316
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 107/299 (35%), Gaps = 18/299 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWGI T++ LE + ++ R+ ++ FS
Sbjct: 8 ISMLLVAVILWGIAIAPTKWALESIQPFTLLFLRLCFAGGICLL----FSFQPLRKSIVN 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+N + + S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 64 RNVPWKRISLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + ++ +T+ SG S ++ A ++ + +
Sbjct: 124 NYWIGIILGFIGVVCITMPSGNNDQSASLIGDILILLSTFLFAFYTILLKRPKQEKNLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ + V F G F + ++ ++
Sbjct: 184 EVFTTLTLIIGAMILFPFAVIETFYYGLPQIDTWKTGLSFTYLVVCATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
R S G+ P + I++SV +L + + I +V+ ++ + K+
Sbjct: 244 RVSASVSGLYLNALPPISIIASVILLNESLTWKILIGGCLVLFGVIWADQDKLRVLMKS 302
Score = 40.7 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGFMKEISMLLVAVILWGIAIAPTKWALESIQPFTLLFLRLCFAGGICLLFSFQPLRKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
N+P + + F SYGI V I++ PL+ I+ S LK+
Sbjct: 61 IVNRNVPWKRISLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I +V +P+
Sbjct: 121 IQLNYWIGIILGFIGVVCITMPS 143
>gi|15903345|ref|NP_358895.1| hypothetical protein spr1302 [Streptococcus pneumoniae R6]
gi|182684405|ref|YP_001836152.1| membrane protein [Streptococcus pneumoniae CGSP14]
gi|15458945|gb|AAL00106.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|182629739|gb|ACB90687.1| membrane protein [Streptococcus pneumoniae CGSP14]
Length = 318
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 22 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 81
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 82 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 140
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 141 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 200
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 201 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 260
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + I+ + + + +++ A+ + L +
Sbjct: 261 SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 318
>gi|306840547|ref|ZP_07473305.1| protein of unknown function DUF6 transmembrane [Brucella sp. BO2]
gi|306845892|ref|ZP_07478460.1| protein of unknown function DUF6 transmembrane [Brucella sp. BO1]
gi|306273784|gb|EFM55622.1| protein of unknown function DUF6 transmembrane [Brucella sp. BO1]
gi|306289464|gb|EFM60687.1| protein of unknown function DUF6 transmembrane [Brucella sp. BO2]
Length = 297
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 85/292 (29%), Gaps = 6/292 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P G +F A ++ +++L S + + R V + G
Sbjct: 3 PKSQGYIFTLLAVTIFATQDGISKYLASHYSPIFITMIRYWVFAAFVVLLALRSGGIAKA 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +F +LA FI+ L + + P++ L FL
Sbjct: 63 AATK-----RPLLQIFRGLLLATEIVTFIFGLSRAGMAMAQSIFQGAPLLVTMLSVPFLG 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ + A + + +L++ + + + FA + + M
Sbjct: 118 EKVGWRRWTAIITGLCGVLLIINPINAHFDANMLFPVAATTMFAVYVVATRAVSKSDSAM 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ VV G H D ++ + + V
Sbjct: 178 TSFFYTGIGGVVVLTIVGMFHITPIAPHDWPWMAALCVCGIASHYFLIRAYDILEAGEVQ 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ Y ++ + I + + IVV A + +L + ++K
Sbjct: 238 PLTYFQLVIGAFIATLIFHEKLTWNIVAGAFIVVGAGLFAMLRERWLALEHK 289
>gi|291529837|emb|CBK95422.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Eubacterium siraeum 70/3]
Length = 294
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 92/292 (31%), Gaps = 8/292 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ P G L + + + + + + ++ R L + ++ G
Sbjct: 6 SKISPKHKGVLCIISSAFCFAFMGAFVRLAGDLPSVQKSFFRNLVAFIFAAAILIRQKGS 65
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +G L+ + + YA+ + ++P + ++
Sbjct: 66 F-----LPQKKSNIGALLIRSVCGTLGILCNFYAVDHLALSDAAMLNKMSPFFVIVFSAM 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL+ER N +Q + ++ L++ S L + + + A G
Sbjct: 121 FLRERTNLVQTLGVIVAFAGSLLIIKPSLANLELVPSLLGFLGGMGAGAAYTAVRWLGIR 180
Query: 198 IE--MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E ++ + F + F + L L+G GL + + K A
Sbjct: 181 GEKGPYIVFFFSGFSCLVTLPFLLFDFHVMTWQQWLVLLGAGLAAAGGQFSITAAYKFAP 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYLLPTVI 306
+ + +Y+ + + + Q D I + I+ + + ++
Sbjct: 241 AKEISVYDYSQIIFSALLGFILFSQLPDIWSFIGYVIICGVGVAMFFYNNRK 292
>gi|229086041|ref|ZP_04218262.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-44]
gi|228697251|gb|EEL50015.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-44]
Length = 295
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 99/295 (33%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ V L ++ R + + V + I+ + +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVISKYVLDFVPPLTLVWLRFIIAF-FVLYTILKITERKN 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + S TP V ++ L
Sbjct: 61 KKKIHIHKRDWFLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVVFATLIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L +I++ +L + ++I+ G +L A + +
Sbjct: 121 KEKLTTRRILSTILATIGVIIVIGWDIEVGSYFIGTIILVGAAITWALLSIYVKIASTRF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + L L + + F +++ G+
Sbjct: 181 SSLLITTYAIFFSLFFITPCMIWELQSSPVGNLNTTIILGILYLGIISTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ S + + P++ + F+L + ++ I +++ ++V+ L
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWFLLDETLNRNFFIGGALIIFSVVITTLEKKK 295
>gi|187478677|ref|YP_786701.1| membrane protein [Bordetella avium 197N]
gi|115423263|emb|CAJ49796.1| putative membrane protein [Bordetella avium 197N]
Length = 316
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/306 (13%), Positives = 92/306 (30%), Gaps = 14/306 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY 73
+ M G IL+ + +F + + +I+ R+L+++P +
Sbjct: 9 SPSRQRQIMAGYFLAGLGAILFSAKAVVVKFTYRYGIDAVTLIAFRMLFAMPFFAAVAWW 68
Query: 74 -FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L + + V + L L F++P + V
Sbjct: 69 QMRRVKRGDIAALTATQRWQIGVLGLLGYYLSSLLDFVGLQYVSASLERLILFLSPSLVV 128
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAY 181
L + +LK + Q A +L L ++++ H L A+++S Y
Sbjct: 129 LLSAWWLKRAVTRRQAWAMVLSYLGVVLVFAHDLSDARAGSDVIRGSLFVFGSALSYSVY 188
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ + +L + + LI L
Sbjct: 189 LICSGELVKRVGATRLVAYAMLVSCVACVIQFFVVHPPSVLLQPAGVYGYSLIHATLNTV 248
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + + T ++ P+ ++ + ++L +PI + +V+ +VV
Sbjct: 249 LPVFMMMWAVALIGAPTASLLGMLGPVSVLFLAAWLLAEPITVWQLAGTALVLAGVVVLT 308
Query: 302 LPTVIN 307
+
Sbjct: 309 GRRAVQ 314
>gi|322421858|ref|YP_004201081.1| hypothetical protein GM18_4398 [Geobacter sp. M18]
gi|320128245|gb|ADW15805.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M18]
Length = 308
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/284 (16%), Positives = 88/284 (30%), Gaps = 12/284 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L V A ILWG + VS V + R+L + G
Sbjct: 24 GALLVLGAGILWGTSGTSQALAPAGVSPWSVGALRLLVGGAALMLLAFLRGG------LG 77
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
G L+ + FF T T + +PVI+ LG VF ER
Sbjct: 78 TGRWPFRGTLMAGGFVAVYQLAFFTAVSRTGVAVGTLVAIGSSPVIAGVLGFVFRGERPG 137
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFFIE 199
IA +L + ++ G + + +A S C+ +
Sbjct: 138 RAWGIATVLALAGCTLLVCGGGALAIDVVGVLLALAAGTSYACYTMAIKVLLPGRTSEAV 197
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M V+ + F + + L ++ + + +F+ G++ +++
Sbjct: 198 MAVVFSLGALLLSPVLFMSDLAWVANPRGIAVILYLGVVVTAVSYWLFAMGLRSVPVASA 257
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ PL+ + + L + + ++ + V
Sbjct: 258 VTLSLAEPLVAALLGILFLGERLTPTALSGIPLLFAGLAVLAYS 301
>gi|182419892|ref|ZP_02951130.1| putative integral membrane protein [Clostridium butyricum 5521]
gi|237667787|ref|ZP_04527771.1| putative integral membrane protein [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182376261|gb|EDT73845.1| putative integral membrane protein [Clostridium butyricum 5521]
gi|237656135|gb|EEP53691.1| putative integral membrane protein [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 306
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 93/292 (31%), Gaps = 13/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G ++ + I +GI P++ + + + R L S + + + +
Sbjct: 1 MNNYKGIIYAILSSIAFGIMPIFAKIAYKNGSNPTSSLLFRFLISGLILLLYLNFKKVSI 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +GM ++ T + + + P + +
Sbjct: 61 KISVKQFLLLFFIGMFGYTITTITLFVSYNYLDSGLATALHYI-----YPALVCIFSFIL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
KE + +I + +L I+ + + L L I + ++ + + S
Sbjct: 116 YKENITKEKIFSLVLSIIGVYSLIAFESKTLNILGILLALFSGLGYALNVISLSFKSIKS 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + M + +L +++ F+ F + ++ + IK
Sbjct: 176 IDNRVVTMYICFGASLGMIIYGAFTESLTFTINLEMMISYIGLSIISTITSMLFLLKAIK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ I+ ++ I+ + L + + + +++I+ +
Sbjct: 236 LIGSTSASILATFEAVVSIIMGIIFLNEKLTFALILGTSLIIISTTILAREK 287
>gi|107102752|ref|ZP_01366670.1| hypothetical protein PaerPA_01003819 [Pseudomonas aeruginosa PACS2]
gi|254236184|ref|ZP_04929507.1| hypothetical protein PACG_02149 [Pseudomonas aeruginosa C3719]
gi|126168115|gb|EAZ53626.1| hypothetical protein PACG_02149 [Pseudomonas aeruginosa C3719]
Length = 299
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 81/289 (28%), Gaps = 3/289 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +L+G+T ++ + L S ++ R L+++ +
Sbjct: 1 MNRRSALAALHGGALLFGLTGVFGK-LASASPGVIVFGRALFAVLALGLFARLAGQAWRA 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L A+ L+ + ++ + SF F + +
Sbjct: 60 LGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFRERIHL 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ +++ L++++ L AI + G
Sbjct: 120 AEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLANRSNSGQVG--PVQ 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + F+ GE L + + +F + K T
Sbjct: 178 AALWQNLVVALCLLPFAVGELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKARTAA 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + + + + ++++A+V+
Sbjct: 238 LVFALEPVYGIAFAWLLFHETPGPRMFLGGALIILAIVLSARLGARGRK 286
>gi|107102149|ref|ZP_01366067.1| hypothetical protein PaerPA_01003199 [Pseudomonas aeruginosa PACS2]
Length = 296
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 8/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S+ G + + + + + + V+ V+ R L + +
Sbjct: 6 SQPQRRNSPPQGAAMLALSALFFALMGGLIREASSTVNNETVVFFRNLVGVLFFLPLALT 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + L + T + YAL + PV +
Sbjct: 66 RGIGPLRTRRPLSHLLR-------TTYGLGGMYCYFYALAHLPLTDAMLFSYAAPVFTPL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +++KE L ++A L+ L +L++ SG + +A+ S+ A + +
Sbjct: 119 IAHLWIKEPLTRRMMVATLVGFLGVLLVARPSGAVVAPIALVGIASSLMAACAFVSIREM 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ ALF +++ + N + L L+G GL S S
Sbjct: 179 SDSEPAYRIVFYFALFGTLFSAVPLAWAWQPLNGQELLLLLGAGLFASLGQLTMSQAYAL 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +G + Y A + V + + + ++ A ++ LL
Sbjct: 239 ASPGVIGPIAYMAIVFAGVIAWLRWDELPSHTSLLGAALIFAASLIPLLGNRPAER 294
>gi|49085956|gb|AAT51317.1| PA2628 [synthetic construct]
Length = 297
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 8/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S+ G + + + + + + V+ V+ R L + +
Sbjct: 6 SQPQRRNSPTQGAAMLALSALFFALMGGLIREASSTVNNETVVFFRNLVGVLFFLPLALT 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + L + T + YAL + PV +
Sbjct: 66 RGIGPLRTRRPLSHLLR-------TTYGLGGMYCYFYALAHLPLTDAMLFSYAAPVFTPL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +++KE L ++A L+ L +L++ SG + +A+ S+ A + +
Sbjct: 119 IAHLWIKEPLTRRMMVATLVGFLGVLLVARPSGAVVAPIALVGIASSLMAACAFVSIREM 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ ALF +++ + N + L L+G GL S S
Sbjct: 179 SDSEPAYRIVFYFALFGTLFSAVPLAWAWQPLNGQELLLLLGAGLFASLGQLTMSQAYAL 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +G + Y A + V + + + ++ A ++ LL
Sbjct: 239 ASPGVIGPIAYMAIVFAGVIAWLRWDELPSHTSLLGAALIFAASLIPLLGNRPAER 294
>gi|321314166|ref|YP_004206453.1| putative permease [Bacillus subtilis BSn5]
gi|320020440|gb|ADV95426.1| putative permease [Bacillus subtilis BSn5]
Length = 319
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 96/296 (32%), Gaps = 11/296 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ MG +V WGI + L Q+ V +++ R+L + + ++
Sbjct: 3 TSNRRMGLFYVITGATCWGIGGTVAKKLFQEYQIDVNWLVTTRLLTAGMLLLMLQLFRKD 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+++ A +L+F + ++ ++ + + +++PVI +
Sbjct: 63 RSQVIEVWKNKASAGQLLIFGLLGMLAVQYTYMASIQHGNAAVATLLQYLSPVIVIIYTL 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKTI 188
+ + L II +L ++ + + I LS+ A A+
Sbjct: 123 LRKQTVLTKQDIITVVLALVGCFFLLTNGSISQLSVPAAAVVWGVLSGFAAAFYTLYAVG 182
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + I + + L L F F
Sbjct: 183 LLHKFDSLVVVGWAMIIGGFALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFI 242
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ ++ PL +V++V LK P + + I ++ ++ L
Sbjct: 243 KSLESLSPKETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALHK 298
>gi|312963183|ref|ZP_07777668.1| protein of unknown function DUF6, transmembrane [Pseudomonas
fluorescens WH6]
gi|311282694|gb|EFQ61290.1| protein of unknown function DUF6, transmembrane [Pseudomonas
fluorescens WH6]
Length = 292
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 81/283 (28%), Gaps = 5/283 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + A L+ +++L + ++ V ++ L
Sbjct: 15 KGILLIVLATFLFSSHDALSKYLAGFYPIVMVVW-----ARYVVHTLLMAGIFLPQSGLR 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ K GM V A L FF AL + F+ P++ L L E +
Sbjct: 70 VLRSKRPGMQVVRALCLLGTSLFFTTALHYIPLAEATAVNFLAPILVTALSVPLLGEHVT 129
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A + + +L++ G + SA F + +
Sbjct: 130 RGQWLAVICGFVGVLVIIHPGGELFTPAVLLPLCSAMFFCFYQLLTRILSQYDTPTTSNF 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L + + + + + ++ G + + + A + + Y
Sbjct: 190 FAGLCNTLVMSAMVPFFWQVPTLWHAVLMLALGTCGMTAHLMLTQAFRFAAPALLAPFGY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + D + G++ ++ +
Sbjct: 250 CQIVFAGLLGWLVFSHTPDMTTVVGIGVICMSGLAAAWQQRRR 292
>gi|134300757|ref|YP_001114253.1| hypothetical protein Dred_2925 [Desulfotomaculum reducens MI-1]
gi|134053457|gb|ABO51428.1| protein of unknown function DUF6, transmembrane [Desulfotomaculum
reducens MI-1]
Length = 308
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 92/272 (33%), Gaps = 12/272 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L V + G + ++T+ L + + ++R+ +++ + Y +
Sbjct: 11 YLVVILGVLAAGFSSIFTK-LAEAPPFIIAAYRLGFTVLIIATPTFYTGR----RELFCI 65
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N K + + S LA+H+ +I +L ++ + P+ + G KE++
Sbjct: 66 NKKDLALACLSGVFLALHFALWISSLSYTSVASSTVLVAMQPLFVITGGYFLYKEQVGRT 125
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIPVGSSEGFFIE 199
++ A+L + +++ ++ + + A
Sbjct: 126 GLLGAVLALFGSVLIGINDFHVGGQALLGDLLAFGGAVFVAGYVLIGRNLRNRMSLLPYT 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V + ++ N F G + ++ FL F +F++ +K K + V
Sbjct: 186 FLVYGAATMVLIILNLFYGSSFYPYPSMTWVWFLCLAIFPTIFGHSLFNWALKYVKAAVV 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ P+ + + F + ++
Sbjct: 246 SVSNLGEPVGATILAYFFFGEVPSLMQLAGGC 277
>gi|55376845|ref|YP_134696.1| hypothetical protein pNG7294 [Haloarcula marismortui ATCC 43049]
gi|55229570|gb|AAV44990.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 331
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/300 (14%), Positives = 98/300 (32%), Gaps = 15/300 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV A +L+G + + + L ++ + R + + IV+
Sbjct: 21 LFVLLA-VLFGGSFVAIKTGLRELPPVLFAGLRFDLAAVTLLGYIVFTR--PRSTWLPRT 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
VG+ + + ++A++ G S Y + P+++ L +RL+ L
Sbjct: 78 RGDFVGIGMAALFLIALNNGLLFLGQGATTPAAASVMYGLNPILAPVFAWWLLGDRLSWL 137
Query: 147 QIIAALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + + ++++ + +L A AV + R + S+
Sbjct: 138 GALGIGVALSGVILIVQPSPSTFTDASAIGQLLVLGAAAAVALGSVLLQRVGPQMDSTPL 197
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
M V A+ + G +G + + + I+ I R
Sbjct: 198 TAWAMAVGAVLLHVASLLVGEPPTAVIGIGPETIASIVAVGIPSTAVAYAIYFGLINRIG 257
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ Y P+ + +L + + F +VV + T+ + ++
Sbjct: 258 PVRANLVAYVVPIFAALMGWVLLGSSVSLWTLVGFLVVVAGFALIERVTIRMELRRLYRR 317
>gi|227873792|ref|ZP_03992019.1| DMT superfamily drug/metabolite transporter [Oribacterium sinus
F0268]
gi|227840363|gb|EEJ50766.1| DMT superfamily drug/metabolite transporter [Oribacterium sinus
F0268]
Length = 288
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 81/277 (29%), Gaps = 7/277 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + + + + + + V ++ R + F +
Sbjct: 9 KDRKIKGIISIILSAAGFAGMAFFVKLSGDVPTMQKAMFRNCVAALIAFVMM------RQ 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ L+ + +++ + S + P ++ + L
Sbjct: 63 QGLHYSVPKELRIPLLLRCCFGTLGILCNFWSITYLKLGDASILQKMAPFFAIVMSIFIL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E+ N + I++ LL +L + GI L +A+ T G
Sbjct: 123 GEKPNKMAIVSVLLALLGAAFVVKPGQGIVGLPALVALFGGFSAGTAYTFVRKVGLGGVK 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+ ++F V+ + T+FLI G + + A
Sbjct: 183 GPVVVFSFSMFSVLALLPFFLLQYKPMTAQQTIFLILAGCSAAVGQIFVTKAYAYAPAKE 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + +Y+ L V + + D + + ++
Sbjct: 243 ISVFDYSQVLFAAVLGFVVFGEIPDVYSFVGYALIFG 279
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 35/108 (32%)
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ + + + + + L+ + + I KL
Sbjct: 41 TMQKAMFRNCVAALIAFVMMRQQGLHYSVPKELRIPLLLRCCFGTLGILCNFWSITYLKL 100
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I++ AP IV S+FIL + + + + + ++ + P
Sbjct: 101 GDASILQKMAPFFAIVMSIFILGEKPNKMAIVSVLLALLGAAFVVKPG 148
>gi|166032852|ref|ZP_02235681.1| hypothetical protein DORFOR_02569 [Dorea formicigenerans ATCC
27755]
gi|166027209|gb|EDR45966.1| hypothetical protein DORFOR_02569 [Dorea formicigenerans ATCC
27755]
Length = 291
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 88/287 (30%), Gaps = 21/287 (7%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + ++WG T + T+ L+ ++++ R L ++ K
Sbjct: 9 GHIAAIVTCLIWGTTFVSTKVLLQDFGPVDLLFSRFLLGYFTLWLM--------RPKKLR 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF-LKERL 143
+ + + + + +++ F AL+ Q S P+ + F +E+L
Sbjct: 61 TEKGQEIIFVGAGLCGVCLYYLFENIALIYTQASNVSVIVSTAPLFVTIMAHFFLKEEKL 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP-----------VGS 192
+ I +++++ G + I
Sbjct: 121 QKYFFFGFVCAIAGIVLLSFGGGENVSVNLIGDLLCVAGSFVWGAYSILIKKISGFGYNV 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + ++ +G + + L + F ++Y +K
Sbjct: 181 IQTTRRVFFYGLMFMIPILIGSGAKFHSSAYTKPLNLANLLYLGIGACAVCFVTWNYAVK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P++ IV SV IL + + + V+ +V+
Sbjct: 241 MLGAIKTSAYIYAIPVITIVMSVIILHEKVTPFMLGGTALTVLGLVI 287
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 40/133 (30%), Gaps = 1/133 (0%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
IA + + + F + +L L + + +F
Sbjct: 10 HIAAIVTCLIWGTTFVSTKVLLQDFGPVDLLFSRFLLGYFTLWLMRPKKLRTEKGQEIIF 69
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ-PIDTVRTIVFG 291
+ + + + + S V ++ TAPL + + + F LK+ + F
Sbjct: 70 VGAGLCGVCLYYLFENIALIYTQASNVSVIVSTAPLFVTIMAHFFLKEEKLQKYFFFGFV 129
Query: 292 IVVIAMVVYLLPT 304
+ +V+
Sbjct: 130 CAIAGIVLLSFGG 142
>gi|78044848|ref|YP_359361.1| hypothetical protein CHY_0503 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996963|gb|ABB15862.1| putative membrane protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 298
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 83/284 (29%), Gaps = 14/284 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ + + WG T + + L + +S R L S + ++
Sbjct: 4 KTKQLLADISLIVVTAFWGTTFVIIKNILANIEPFSFLSFRFLLSTFFLLPLLL------ 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +PK V + L + + L + F + V+ L S+
Sbjct: 58 ---QKEGFSPKGVFFGSIAGFFLWLGYILQTIGLKYTSAANSGFITGLAVVMVPVLSSIL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSE 194
K+ + I L L L IM+ + + + + +
Sbjct: 115 NKKPVTPGVIFGTGLSFLGLFIMSFDFKAGFNTGDLLTLAGALFFSMQIVSVERFSPNFS 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + +A + + + N + F + S +
Sbjct: 175 ATSLTLGQIATVGVLSLPAALWLEEPFKPYPNEVFYAIVFTAIFATVLAFLVQSKAQQFT 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S V ++ P+ ++ +V + + + I ++ M+
Sbjct: 235 SASHVALIFTLEPVFALLFAVLFGGESLVAKQGIGAFFILAGML 278
>gi|325263131|ref|ZP_08129866.1| putative membrane protein [Clostridium sp. D5]
gi|324031524|gb|EGB92804.1| putative membrane protein [Clostridium sp. D5]
Length = 312
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/288 (10%), Positives = 74/288 (25%), Gaps = 11/288 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS------- 79
+ + ++WG + ++ + S R L + I
Sbjct: 13 VMLVLTALIWGSAFVAQSVGMDYIGPFTFNSLRCLLGGIVLLPVIWVMGRKKKTAETEEQ 72
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +F LAV L+ F + +I LG
Sbjct: 73 RAEAKKSSKTLWIGGLFCGLALAVASSLQQIGLVYTSAGKAGFITALYILIVPVLGLFLG 132
Query: 140 KE---RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ ++ +A + + + + + I + ++G
Sbjct: 133 RKAGGKIWFSVGLAVVGMYFLCIKEGFSISYGDVLMIICAFVFSLHILIIDYYSPKADGV 192
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ I + V S L L + + K
Sbjct: 193 KLSCIQFFICGILCAVPMFVSENPDLGSILDAYLPLLYAGVLSCGVAYTLQIIAQKNTDP 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ + ++ I+ + + +V A+++ LP
Sbjct: 253 TVASLILSLESVFAALTGWLIIHETLSAKELFGCALVFAAIILAQLPE 300
>gi|323691530|ref|ZP_08105799.1| hypothetical protein HMPREF9475_00661 [Clostridium symbiosum
WAL-14673]
gi|323504424|gb|EGB20217.1| hypothetical protein HMPREF9475_00661 [Clostridium symbiosum
WAL-14673]
Length = 300
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 102/296 (34%), Gaps = 9/296 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +LWG+ P +T+ L +S + + + + + + L
Sbjct: 5 YILAGGTIMLWGMMPPFTKLLLSGLSNAKTVFISSMIAFIFMAVLNLACGNLKRFL--QY 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V M+ ++ + Y L ++ PV++V ++L ER
Sbjct: 63 RPKDYVKMIALGFMGKFLYSVLYFYGLSGLAAGDACIINYLWPVMTVVFSCLWLGERFTW 122
Query: 146 LQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ +A ++++ + L + V + A + + F+
Sbjct: 123 RKSMAIFASFSGVVLVASKGSMEGLLSGNLRGIVSCVAAAVCYGAFNVLNKKENRDQFVS 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M V A + + GE L + +++ F +++ ++ + +
Sbjct: 183 MTVYFFSAALFSGIWFLAEGESIALTGSQTAGIIWLGVFMDAAAFLMWALALQNGDTAKL 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y P + ++ S +L +PID I +++ + V + + + K K+
Sbjct: 243 SNFAYITPFMAVLYSALLLNEPIDRYSVIGLLLIMGGIFVQMGGSERGASLFKRKR 298
>gi|196248589|ref|ZP_03147290.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
gi|196212314|gb|EDY07072.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
Length = 292
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/288 (9%), Positives = 82/288 (28%), Gaps = 4/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ ++++ A +WG + +++ L+ + ++ R +L + + L
Sbjct: 2 KQPVLASVYLSLAASIWGGMYVVSKYVLDYIPPFTLVWLRYAIALVVLVAIVAAKREPLP 61
Query: 80 LLKDTLKN---PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+G +V + + +F + +
Sbjct: 62 KHGRDWGMVIAIGVIGYIVSISLQFVGTKWSNAHTASLITASTPAFVVLFARWLLGEALT 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L +++ L + +G L A + S
Sbjct: 122 WRKLAALLLATAGVIVIVGLGDGGESTFAGNMALVGAAVTWALLSVLVKMASARLSVLSI 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++A + ++ + L + + F +++ G++
Sbjct: 182 TTFAILVAFIGMTPMLIVESPELTAVHWNALVVLGVLYLGIVSTAGAFFLWNKGLEMIDA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + PL+ + L + +D I ++V +VV +
Sbjct: 242 GIGSLFFFFQPLVGSLFGWLFLHEQLDVSFWIGGVLIVAGVVVAVRSE 289
>gi|330445679|ref|ZP_08309331.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489870|dbj|GAA03828.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 309
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 89/294 (30%), Gaps = 12/294 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIV 72
+ E + G F L+ I P++ + Q + +++ R S+P +
Sbjct: 12 NSETSYPNINKGIFFALIGTALFSIKPVFIKLAYQFGGDAVSIMALRAFSSVPIYIIMMF 71
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + ++ A + LA + I A+ L F+ P V
Sbjct: 72 WLLRKTENRTNFKRHGVAASAVGILGYYLASYL--DIAAMAYISAQLERLLIFLFPSFVV 129
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW--------SAYCFA 184
+ + LK+ A L + + ++ H + + + + A
Sbjct: 130 LISWIVLKQTPVKGTFKAIFLGYIGVALIVFHDMNNIGNNILLGSGLAVASAFIFACYLI 189
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + ++ + + G L L +
Sbjct: 190 MSKKLISQMGSQLFTCIGMGSAGIVILIQSQWQGINVITLDPQLIGLGIALGIFCTVLPS 249
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +++ S + + P + V ++ IL +P + VV ++V
Sbjct: 250 FFVAAAMQKLTPSQLSLTSNVGPAITAVFAITILSEPFTWFHAVGMVFVVYSVV 303
>gi|332521309|ref|ZP_08397765.1| protein of unknown function DUF6 transmembrane [Lacinutrix algicola
5H-3-7-4]
gi|332043037|gb|EGI79235.1| protein of unknown function DUF6 transmembrane [Lacinutrix algicola
5H-3-7-4]
Length = 284
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 95/287 (33%), Gaps = 8/287 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L++ + I + ++ + L SV +++ R L SL I+
Sbjct: 3 KKAILYMVLSAIAFTFLNVFVKSLGDFSVYQIVFFRSLGSLFFTIPFII--------KNK 54
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L+F + + F +L ++ PV + FLKE++
Sbjct: 55 IPILGNQKKILIFRSVFGLISMTLFFLSLKHIATGTAVSIRYIAPVFAAIFAVFFLKEKI 114
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q +L + ++I+ + SA I + + V+
Sbjct: 115 KIMQWFLFVLAFIGVIILKGIGNNLQTQGILYALISAIFAGLVYISIRKIGDKDHPVIVV 174
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ V+ G ++ L L+ G F + ++ + + + ++
Sbjct: 175 NYFMVISVIVGGLLSISNWKTPIGSQWLTLLSLGFFGYFAQLYMTKAMQLGETNQIAPLK 234
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y + ++ V L + + ++++A+V L+ K
Sbjct: 235 YLEVIFTMLIGVIWLSEKYTFWSIVGISLILLALVFNLIIKNKKRPK 281
>gi|326775000|ref|ZP_08234265.1| protein of unknown function DUF6 transmembrane [Streptomyces cf.
griseus XylebKG-1]
gi|326655333|gb|EGE40179.1| protein of unknown function DUF6 transmembrane [Streptomyces cf.
griseus XylebKG-1]
Length = 323
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 85/289 (29%), Gaps = 18/289 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S P + A +WG T L L L + R L +
Sbjct: 2 TSRPNIRTAALTGLAPAVWGSTYLVATELLPPDRPLLATTVRALPGGLVLLAL------- 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ V + A G + + P+ V L ++
Sbjct: 55 ---GRRLPAGVWWWRAPVLGVLNIGAFNFLLFLAAYRLPGGIAAVIMSAQPMFVVVLAAL 111
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
FL ER+ L +A ++ + ++ L PL +L + I + G
Sbjct: 112 FLGERVRALHALACVMGAGGVALLVLRGAAPLDALGVLAAVGGALCMGLGITLTKRWGRP 171
Query: 196 -----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
L L + + G L F L + ++ G
Sbjct: 172 EGVGLLTFTGWQLTAGGLVLLPFWLSLEGLPDSLTGSNVLGFAHLITLGAVLSYFLWFRG 231
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+R V + +P++ + + + + ++ + +++ A+V+
Sbjct: 232 IERLPAVAVSFLGLGSPVVATLLGYLVKGETLSVLQLVGMAVILGAVVL 280
Score = 43.4 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 6/81 (7%), Positives = 23/81 (28%)
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ + L + R ++ P+ ++V + L + +
Sbjct: 59 PAGVWWWRAPVLGVLNIGAFNFLLFLAAYRLPGGIAAVIMSAQPMFVVVLAALFLGERVR 118
Query: 284 TVRTIVFGIVVIAMVVYLLPT 304
+ + + + + +L
Sbjct: 119 ALHALACVMGAGGVALLVLRG 139
>gi|158319311|ref|YP_001511818.1| hypothetical protein Clos_0259 [Alkaliphilus oremlandii OhILAs]
gi|158139510|gb|ABW17822.1| protein of unknown function DUF6 transmembrane [Alkaliphilus
oremlandii OhILAs]
Length = 287
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/276 (13%), Positives = 93/276 (33%), Gaps = 9/276 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L++ + + + + +F + +E + R + SG
Sbjct: 6 KGILYMLSSSLFFALMAAAVKFSGDIPTMEKVFFRNIIGFLF--------SGYRIFKMGE 57
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L + + + + YA+ + P + L ++FL E++
Sbjct: 58 SFKGNNTRYLSYRGILGFLGVLLYFYAIDHLPLADAVVLNQLNPFFVILLAALFLGEKIK 117
Query: 145 HLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
LQI A + ++ +L + L A+ + S + + T+ + V
Sbjct: 118 KLQIPAIVSALMGVLFIAQPQFDYAFLPAALGIASSIFAASAYTMIRHLRLTDTPNLIVF 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ F F + N L L+ G+ ++ + + + A+ + I
Sbjct: 178 YFTGISTIITIPFITVGDFIIPNTITFLSLLSVGIFSTAAQYLMTIAYRYAEAGDLSIYS 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y + I+ + + + + + +I V+ +
Sbjct: 238 YGNTVFSILIGILLWGEVPNLMSSIGVIFVLGGAYI 273
>gi|329723276|gb|EGG59806.1| putative membrane protein [Staphylococcus epidermidis VCU144]
Length = 289
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 97/287 (33%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + + + + + ++ + + V + R ++ F I +
Sbjct: 2 NSKVKGIIAILISAVGFSFMSVFFRLAGDLPVFQKSLARNFVAMFIPLFFIYKYRQ---- 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 58 --PMFGKLSSQPLLISRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTIVLSLIFLH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ I+ +L++ + +IA S A V +
Sbjct: 116 EKVRKYQITAMIIAIIGMLLIVKPEFSSSVIPSIAGLLSGIFAASAYTCVRALSTREKPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF VV + LFL+G GL + + A +
Sbjct: 176 TIVFYFSLFSVVVLIPFSIFTYTPMTTIQILFLLGAGLSAAVGQIGITLAYSFAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + + + + + D T+ + +++ A Y+
Sbjct: 236 IFTYASIIFTALFGFILFGESPDMFATVGYIVIIGASY-YMFDKARR 281
>gi|167620000|ref|ZP_02388631.1| hypothetical protein BthaB_27077 [Burkholderia thailandensis Bt4]
Length = 311
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 83/302 (27%), Gaps = 15/302 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + + R L + ++ +
Sbjct: 2 KTKLVGYLYLVAAMTGVGSTVVASRIAGDGLPPFTAAALRFLIASVPLYALMRAQRHRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L ++V +A + + P +S L +V L
Sbjct: 62 RLAP----RDVGLLVVQAACGGVGYTVVLLAGTHLSSPVDAGVMLGTLPAMSTLLAAVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPV 190
+ER AA L +L++T G S+ AV A
Sbjct: 118 RERQTPRDWSAAALATAGVLLVTFTPGRATPSMRALVGDALVLAAVACEAVFILMNRRLA 177
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L V + + +
Sbjct: 178 VPLAPLVQSTAMSVLGLTLALVPAAFEWRAATAAWQPAALAATAYYALVPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G R + + AP ++ + + + +R +VV ++V L +
Sbjct: 238 GSARTSGTEAALFTAVAPASAVLFAAAVFGESPGGMRFAGIAMVVAGVLVGALRPRRGAK 297
Query: 310 KN 311
++
Sbjct: 298 RS 299
>gi|134100345|ref|YP_001106006.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
gi|291007684|ref|ZP_06565657.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
gi|133912968|emb|CAM03081.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338]
Length = 313
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/296 (8%), Positives = 76/296 (25%), Gaps = 24/296 (8%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P + +G + + + L + L+V R+ + +
Sbjct: 9 QHPRSGALAVAVASAFCFGGSGPFAKPLINAGIPPLQVAWLRLAGGALLMLPFAL----- 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + +L + +A + A+ + F+ PV+ +
Sbjct: 64 ---RHAAVVRREPKLLLGYGVFAVAGVQACYFAAIARIPVSVALLIEFLGPVLVLGWIRF 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ + ++ + L + + A + V S
Sbjct: 121 VRRRPVSRSAAVGVVIALAGLACVVEVWSGLTFDPLGLLLGLAAAACQAAYFVLSDSSAE 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGN--------------IPDTLFLIGYGLLNSFV 243
+ L L + + +
Sbjct: 181 ADPRALTSYGLLVGAVVVAVIARPWEIEWSRLAGQVQLAGYAVPALVCVAWVVLVGTVLA 240
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++R G + + P++ V + +L + + V+ + +++ +
Sbjct: 241 YLTGIVAVRRLSAPVAGAVAFLEPVVATVLAWSLLAEHLGPVQLVGGALILAGAFI 296
>gi|126138296|ref|XP_001385671.1| hypothetical protein PICST_73086 [Scheffersomyces stipitis CBS
6054]
gi|126092949|gb|ABN67642.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 460
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/307 (9%), Positives = 76/307 (24%), Gaps = 32/307 (10%)
Query: 26 GTLFVFCAYILWGITPLYTQFL-------EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + + I + L + L+++ R+ + ++
Sbjct: 64 GISLLILSQFFNSIMVTTCKLLVTDKDFNTPIHPLQILFVRMFITYFCCLLYMLLTRSVP 123
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + F F + L +F + ++
Sbjct: 124 DAPFGPRNLRWLLALRGFVGFFGVFGLYFSLQYLSLSDAVAITFLIPMVTGFLAWVILHE 183
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------------------------I 174
+ + I +L ++ + G S
Sbjct: 184 RYSVIEGVCSIVSLGGVILIAKPHFIFGAQSDSETSSVDEAVESSSTEKRLLATGVGLVG 243
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
S + I + + L + +V N +
Sbjct: 244 VCGASTVYIVLRKIGKAAHPLLSVSYFALTCCVITFVSILVIPSLHFVLPSNRYQWVLFC 303
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
G F+ + GI+R + + +M YT + ++ + I + + +++
Sbjct: 304 LIGFSGFFMQFSLTAGIQRVRAAKASLMSYTNMVFALIWDLTIWGHFPGLLSVLGIVLII 363
Query: 295 I-AMVVY 300
A+++
Sbjct: 364 GNAVIII 370
Score = 40.7 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 35/116 (30%), Gaps = 1/116 (0%)
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I + I +++ + G L G + F +
Sbjct: 94 PIHPLQILFVRMFITYFCCLLYMLLTRSVPDAPFGPRNLRWLLALRGFVGFFGVFGLYFS 153
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ LS + + P++ + IL + + + + + +++ P I
Sbjct: 154 LQYLSLSDAVAITFLIPMVTGFLAWVILHERYSVIEGVCSIVSLGGVILIAKPHFI 209
>gi|16421537|gb|AAL21864.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|261248122|emb|CBG25957.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|332989856|gb|AEF08839.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 295
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 6/289 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + + F + D K+
Sbjct: 1 MFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQ-RTRFHDAWKD 59
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L+ Q
Sbjct: 60 KKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKLSLFQ 119
Query: 148 IIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 120 AIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLWALPV 179
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+L +++ + + +F+ + L G+ +Y
Sbjct: 180 SLLIFLFSDTGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLAQYIE 235
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P L + ++ I + I+ + F V + + + + + K
Sbjct: 236 PSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 284
>gi|297154648|gb|ADI04360.1| hypothetical protein SBI_01239 [Streptomyces bingchenggensis BCW-1]
Length = 313
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 78/277 (28%), Gaps = 14/277 (5%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ I+WG + L + + VL V+ R S + +D ++
Sbjct: 16 LLLVAIVWGSSYLAAKTATYALPVLMVLFARYAISAIACLALVAARRRNGRYTRDEVRVG 75
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
A Y + +T V++ L RL
Sbjct: 76 SL------LGVTQAAVLVLETYGVAHTSAANAGLIISLTIVLTPLLDRTASNGRLPPRFF 129
Query: 149 IAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
A + +L++ ++ SG L+ A V + +
Sbjct: 130 AATGVCLLAVTLLMSGSGFQTPRIGDLLMVAAAVVRAVHVALVGRLTKGRVVRPLHLTAV 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + V + + + + F F ++ ++ + S +
Sbjct: 190 QTVVGSALFAVPASSGLPRLTQVDAAVWSQLVYLALFCSVFAFLAQTWAVQNSSASRASL 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ T P+ + + + + T+ + ++V
Sbjct: 250 LLGTEPVWAVAVGIGLGGEKFSTLAALGAALMVTGTY 286
>gi|224438049|ref|ZP_03658988.1| hypothetical protein HcinC1_08745 [Helicobacter cinaedi CCUG 18818]
Length = 376
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 82/280 (29%), Gaps = 14/280 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L A + + L +S + + +R+ +LP + + +
Sbjct: 98 ILLALLAESFIIYASVLVK-LTDMSPINLGFYRIALALPIFWLMANTRRNVFKIPLKDIA 156
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ + A FF AL + + I + +G F KER
Sbjct: 157 ------FMMLAGIFFAFDLLFFNLALRHTSVANVNLFASLACFILMPIGIFFFKERFKKS 210
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ A++ + + I+ G ++V + A I
Sbjct: 211 LLVGAIVALFGIFILVGGKGELSVATPFGDFMAFLSVLCYSCFLAVIYSLRKRYGTLEIM 270
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L + G + + F+Y + + T
Sbjct: 271 FFACIGSSLMLLALALVFEGFEVPKDMKDFGIIALIALCGQVIGQGFFNYILGKVNTQTS 330
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ +P++ + FIL + + + +++ + V
Sbjct: 331 SLLLLFSPIIAALMGFFILGEKLGIFEILGILVIIFGVFV 370
Score = 36.0 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 36/91 (39%)
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ W + + F + D F++ G+ +F F+ ++ ++ V + A ++
Sbjct: 136 IFWLMANTRRNVFKIPLKDIAFMMLAGIFFAFDLLFFNLALRHTSVANVNLFASLACFIL 195
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +F K+ + + + + + +
Sbjct: 196 MPIGIFFFKERFKKSLLVGAIVALFGIFILV 226
>gi|167757314|ref|ZP_02429441.1| hypothetical protein CLORAM_02864 [Clostridium ramosum DSM 1402]
gi|167703489|gb|EDS18068.1| hypothetical protein CLORAM_02864 [Clostridium ramosum DSM 1402]
Length = 286
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 86/286 (30%), Gaps = 4/286 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + A + ++ + + ++ R L + FF ++
Sbjct: 2 NNIRKGMMCIILAAFFFAAMNVFVKLAGDLPSIQKSFFRNLVAALFAFFILL---KSKQG 58
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + T+ + + + LL + + +I L
Sbjct: 59 FTYKQKDLPMLLLRSVFGTLGILCNFYAVDHLLVSDASMLNKLSPFFVIICSSLFLKEKA 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R+ + II A + L ++ + + + S+ + A + +G
Sbjct: 119 TRIQKISIIVAFIGSLFVIKPSFNLLNNVDSIIGVLGALGAGIAYTCVRKLGKQGVNGAK 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V + + + + + L G GL+ + + A +
Sbjct: 179 IVFFFSCFSCLSVLPYLIINYQPMSLEQFLILL-GAGLMAAGGQFAITAAYNNAAGKDIS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I +Y+ L + L Q D + + I++ A + L
Sbjct: 238 IYDYSQILFAAILGFIFLNQIPDIWSIVGYIIIIGAALGVYLYQRR 283
>gi|163796294|ref|ZP_02190255.1| acetylornithine deacetylase [alpha proteobacterium BAL199]
gi|159178436|gb|EDP62978.1| acetylornithine deacetylase [alpha proteobacterium BAL199]
Length = 326
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 9/290 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
A ++ F+ A ++ + + L ++ ++I R + A++
Sbjct: 20 APDQPLLAIGFLLGANFVFTAMDGFAKGLAGSGMAAEQIILLRYALVSVLLVPAVLRHWY 79
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
A G+L+ + L VH + S Y L
Sbjct: 80 ARPWRTSRPVAHIARGVLLIGSATLFVHAMVHLPLETATAIGFVSPLY------VTALSI 133
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL E++ + A + +L++ + S+ C+A I G
Sbjct: 134 PFLGEKVGIRRWAAVGAGFVGVLLILRPGSDVFQLAMLLPLVSSLCWAAGLILTRQMRGT 193
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +L + +V G + + FL+ + + + A
Sbjct: 194 EGPLTILIWSTVSGLVAIIPLGILDWRNPTPAEWSFLVAIAICHVAGQYLTIRAFMLASA 253
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S + Y+ + I+ VF D I + ++A +Y+
Sbjct: 254 SLIAPFSYSTLVWAILIGVFAFGSYPDAPTLIGGAL-LVAAGIYVWHRER 302
>gi|85703978|ref|ZP_01035081.1| membrane protein, putative [Roseovarius sp. 217]
gi|85671298|gb|EAQ26156.1| membrane protein, putative [Roseovarius sp. 217]
Length = 306
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 86/297 (28%), Gaps = 7/297 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L + + + + + L V + +V+ R L + V
Sbjct: 2 PRSDNLTGALLMMGSMAAFTLNDAMIKALAGQVPLFQVMFLRGLVTTILVALIAWKMGAL 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L P M+ + + AL S P+ ++
Sbjct: 62 KRHLPREDWGPVFWRMVGEIGSAYFF-----VSALYNMPLANISAIMQALPLTLTLAAAL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F +E + ++ A L + ++++ ++ + + +
Sbjct: 117 FFREPVGWKRMSAILAGFIGVMLIVRPGTEGFNVYSVYGLAAVAFVTLRDLATRKLSRDV 176
Query: 198 IEMC-VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
M L + S + + L + G ++ + ++ ++
Sbjct: 177 PSMLVTLFNSFFIMAFFGLGSLTGEWEPIDARAALIICGAAVMIIGGYLFSIMVMRVGEI 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S V YT+ + ++ + T+ I IVV + + L S + K
Sbjct: 237 SFVAPFRYTSLIWALLLGWLVFGDWPQTLTLIGAAIVVASGLFTLYREAQISRRAKA 293
>gi|289643124|ref|ZP_06475254.1| protein of unknown function DUF6 transmembrane [Frankia symbiont of
Datisca glomerata]
gi|289507088|gb|EFD28057.1| protein of unknown function DUF6 transmembrane [Frankia symbiont of
Datisca glomerata]
Length = 322
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 91/291 (31%), Gaps = 16/291 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S T+ G L + A L+G+ + L + +S + + + R + + IV+
Sbjct: 8 KSQRTLSGYLCISAASALFGLAGAVAKVLFNDNMSAVSLTALRSFCAAVALVPVIVFARA 67
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + ++ L A+ + + PV + +G
Sbjct: 68 RILPVNRAQLGHLGIMTILLIMVNLTF-----YIAISRTDVAVAIMLEYTAPVFVILIGL 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKT 187
LN + + +L ++T + + ++ Y A
Sbjct: 123 GQGTHLLNRASVTVLGMSVLGCYLLTGAYDADIFRANRLGLAAGLLCGLAFALYNMAGNR 182
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
E + + A+ ++V + L + +
Sbjct: 183 ARRLDLETTTLTFHTFVMSAVGWLVLVPVLPLDRIDYRPSTVAYILFIGVFATVVPYWLL 242
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G+++ ++ P++ +++ ++ + + + ++++A+V
Sbjct: 243 LRGLRQVDAFPATVIGMLDPVVAGLAAYLLVDERLALPQLAGIALLLVALV 293
>gi|189351118|ref|YP_001946746.1| drug/metabolite transporter (DMT) superfamily permease
[Burkholderia multivorans ATCC 17616]
gi|189335140|dbj|BAG44210.1| drug/metabolite transporter (DMT) superfamily permease
[Burkholderia multivorans ATCC 17616]
Length = 309
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 87/285 (30%), Gaps = 16/285 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L+V + +G ++ ++ V VL ++ R +
Sbjct: 12 LQGALYVALSAAAFGAMAIFGRYAYAGGVDVLGLLIVRFAIGGTVLAAIA------WRRG 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ A + AL Q L + ++ P L + +L E
Sbjct: 66 VVWPRGRALMPLVAMGALGYVGQSFCYFTALRHAQASLVALLLYLYPAFVTLLAAWWLGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL + +A +L + +M +A+A+ + ++ G
Sbjct: 126 RLTRAKGVALVLCVAGSALMVGGGHGEPFGIALALGAAVVYSLYIVGGTKATRGVDPLAT 185
Query: 202 VLAIPA--------LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I + V F + L + F G++R
Sbjct: 186 TAIICVSATAALVLIALVRTVAFDAPPRWPATAGGWAAMLAIALVSTVAAMLAFFAGLER 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ ++ P++ + + + + + ++ ++ A++
Sbjct: 246 LGAARTSMLSTLEPVVTVALAALLFGEALSPLQWAGGVAILAAVL 290
Score = 37.6 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 27/82 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 68 WPRGRALMPLVAMGALGYVGQSFCYFTALRHAQASLVALLLYLYPAFVTLLAAWWLGERL 127
Query: 283 DTVRTIVFGIVVIAMVVYLLPT 304
+ + + V + +
Sbjct: 128 TRAKGVALVLCVAGSALMVGGG 149
>gi|169836590|ref|ZP_02869778.1| Predicted permease [candidate division TM7 single-cell isolate
TM7a]
Length = 296
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 90/288 (31%), Gaps = 11/288 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L A LW I+ + + L S ++S R L S +F +++ S
Sbjct: 6 KLQGMLLAGLASSLWSISGISGEILFKKYNFSSDWLVSIRTLISGILLFMVVIFIEK-KS 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+LK +G+++F + + + + ++ F P S+
Sbjct: 65 ILKPLKNKKDFIGIILFGTAGMYLVQYTYFKTIELSNVSFSTILQFTAPFFIFIYESIKN 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
++ ++ + +L ++ + L L + ++ +
Sbjct: 125 RKIPAVSTLLLLSMTVLGVVFIATKGKISSLSVSPEALLLGLISAIMIAFYSIYPKRLLK 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + I + + I L S + I+ +
Sbjct: 185 KYGSITVVGRGMIVGSIISNIVHPIWKIQGDVNSKSIIQVAIVVILGTSIAYLIYIASLN 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S GI+ P+L V SV I V I F +V ++ +
Sbjct: 245 YISSSLAGILTAFEPVLAAVLSVVIFGLRFSFVELIGFILVFASIFIL 292
>gi|159035898|ref|YP_001535151.1| hypothetical protein Sare_0225 [Salinispora arenicola CNS-205]
gi|157914733|gb|ABV96160.1| protein of unknown function DUF6 transmembrane [Salinispora
arenicola CNS-205]
Length = 364
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 86/294 (29%), Gaps = 11/294 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + ++L + + A +WG + L+ + + ++ L++ +RV + +
Sbjct: 6 TPDRSALRSWLPGFLALAA--IWGSSFLFIKIGVRELHPLQLTLYRVGTGALTLLILLAV 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + G L + +G + + + V P+ +
Sbjct: 64 LRVRLPREPRIWAHLVVTGALGVALPFTLFGYGEQRVESMLAGIWNATTPLVVLPMAVLA 123
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ L ++ L +++ L + G + + +
Sbjct: 124 FRTERLTAARAGGLLLGFLGVLIVLGVWEGVGGAHFTGQLMCLGAATCYGIAIPYQKKFV 183
Query: 194 EGFFIEMCVL--------AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
G L + + L + F
Sbjct: 184 VGQSYSGLALSTAQLLTALALLAVVTPFVAGAPPAPTALTGPVVVSVAALGAVGTGLAFV 243
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I I+ A ST + Y P+ ++ VF L + + + + +V++ + V
Sbjct: 244 IHFRNIRVAGASTAATVTYLIPVFAVLIGVFALGERLTWHQPVGALVVLLGVAV 297
>gi|302340748|ref|YP_003805954.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
gi|301637933|gb|ADK83360.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
Length = 302
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 107/288 (37%), Gaps = 11/288 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + V + + +G+ P++ + + S L ++ R + +F I+
Sbjct: 5 NKIEGVVLVAISAVSFGLMPVFAKIAYTANTSTLTLLFLRFSVAAIFMFLLILMKRLVFP 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L+ A + AL + S + PV+ + ++FL
Sbjct: 65 ------SKKEILIFLLMGAVGYTGQSFCYFTALNFASASVVSLLLYTYPVMVMIGSALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE++ +I+A + +++ G I SA ++ + +E
Sbjct: 119 KEKITFRKILALGFALTGAVVIIGAKGSANSIGIILSVASAVVYSGYILISSKVIKAGME 178
Query: 200 MCVLAIPALFYVVWNG---FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ A L + G F+ G + ++ + F F G+++
Sbjct: 179 VQSSAFIMLGASIVYGIVNFTSGFSAPQNIKGISAVVMIALISTVLAFWSFFSGLEKIGP 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S+ ++ P++ + SSV IL + I I +V+++++V L
Sbjct: 239 SSAALVSILEPVVTVFSSVMILSEKITLNIIIGGFLVIVSLLVILTSA 286
>gi|301054206|ref|YP_003792417.1| drug/metabolite exporter family transporter [Bacillus anthracis CI]
gi|300376375|gb|ADK05279.1| transporter, drug/metabolite exporter family [Bacillus cereus
biovar anthracis str. CI]
Length = 303
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAVLAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGAIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTICMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYITLAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|300690623|ref|YP_003751618.1| hypothetical protein RPSI07_0959 [Ralstonia solanacearum PSI07]
gi|299077683|emb|CBJ50319.1| conserved membrane protein of unknown function, DUF6, putative
transporter [Ralstonia solanacearum PSI07]
Length = 310
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 81/278 (29%), Gaps = 4/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + LWG + L+ + + +I+ RV + + + GGL L+
Sbjct: 6 VLELLTLAALWGGSFLFMRVAAPPFGPVALIALRVAIASAFLLPVL-AMRGGLGALRAHW 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ AVG+L + + + F V V+LG R+
Sbjct: 65 PHLLAVGVLNSAIPFCLFAYAELTLTAGFTSVLNAAAPLFAAIVAFVWLGERMSSWRMLG 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--FIEMCVL 203
L I +I+L L +G ++A A+ + + G
Sbjct: 125 LAIGFVGVIVLVGGSSALDAGQGGRAVAAALGATVLYGLASSYTKRHLTGVPPLAVATGS 184
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A + + + +F + + +
Sbjct: 185 QLAAAVVLAPLAVWLWPAHTPTGSVWFHVIGLGIACTGIAYILFFRLVAHVGPTRAVSVT 244
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P+ ++ + L + + ++++ +
Sbjct: 245 FLIPVFGVLWGILFLGEQLTLNMVAGCAVILLGTSLST 282
>gi|294339935|emb|CAZ88298.1| putative permease of the drug/metabolite transporter (DMT)
superfamily [Thiomonas sp. 3As]
Length = 300
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 100/295 (33%), Gaps = 7/295 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ P + L + A ++W + + T+ L + L+++ R ++ GV +++ G
Sbjct: 3 AKPHLRAVLAMVGATLMWSVAGVITRHLHHQNGLDLVFWRSSFAALGVLAWLLWRQGPRG 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +D A +L SA V + F+ AL T + ++P+I+ LG + L
Sbjct: 63 LARDV---RHASPLLWLSAGFWGVMFTAFMVALTLTTVAQTLIAESLSPLIAALLGWLVL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEG 195
+ L +A L + + + + L + V + A G
Sbjct: 120 RHALPARTWLAIALALTGMGWIVWQNLHHLNGSTQLLGMLVALAVPFSAAANWVSLRRAG 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ M + + V + + + + +R
Sbjct: 180 AAVPMQATVMLGALFSVLAVAFPAWPVSVDLHDLLWLAFLGVFQLAAPGLLAVWAAQRLA 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ VG++ + I+ + + + G+++ A+V L +
Sbjct: 240 PAEVGLLGLLEIVFGILWAWIGAGEQPSFGTLMGGGLIMFALVGNELLGWRQIKR 294
>gi|229029495|ref|ZP_04185577.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1271]
gi|228731848|gb|EEL82748.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1271]
Length = 321
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 96/297 (32%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 4 NRLKGIIMVVIGACLWGLSGTAAQQLFQYEHVSAEWLVTIRLLISGVILLIISSFGTNKK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 64 EIFGIWKQKSDATKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 124 WNVRPSKIDFISIALSLVGTFLLLTNGSVHNLAVSTPAIVWGILSGLSLAFYSLYSKELL 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + S E L + + +F
Sbjct: 184 DRWSSSVIVGWGMIIGGIGVTIVHFISTREFILLSTMKYVKLSTLPLITFVVIFGTLIAF 243
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 244 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGALCVIVMVLILS 300
>gi|218682212|ref|ZP_03529813.1| transporter, DME family protein [Rhizobium etli CIAT 894]
Length = 318
Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 97/290 (33%), Gaps = 4/290 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ T+ G L F Y ++ + + L S ++ ++ + + + F G
Sbjct: 2 TTASTTLRGVLVAFVGYAVFAFSDASIKALHGAVP----SFQIAFTGAVLSLSALPFIKG 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + A I A F+ P + L +
Sbjct: 58 PGDSWLDIFATTNRPLWMARFAAGATGSIASIIAFTKLPMAEAFCLLFLLPSVVTILSVI 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKE + + A ++ L +L++ L + +A T A A + + +
Sbjct: 118 FLKEDVRWQRWAAVIVGFLGVLVVLRPGFRELSAGHLAATIGAVSAAVAIVILRALGPAE 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L ++ +G + + +F+ GYGLL + + + A +
Sbjct: 178 KRLSLYGASLLGTLIVSGVLMLSEIVVPSPQQWIFIAGYGLLGAAGNVMLMTAARLAPAT 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V +Y+ + I +D + +++ + ++ L+
Sbjct: 238 LVATPQYSQMIWAIGFGYLFFNDHVDLPMALGIVLIICSGLLTLIRERKR 287
>gi|187934435|ref|YP_001887208.1| transporter [Clostridium botulinum B str. Eklund 17B]
gi|187722588|gb|ACD23809.1| transporter [Clostridium botulinum B str. Eklund 17B]
Length = 293
Score = 76.5 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 90/281 (32%), Gaps = 6/281 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N G +F+ + + + + + + L+ R L + I+
Sbjct: 4 NNLSNRSKGIIFIILSAFGFAMMSAFVKLSGDLPSLQKSFFRNLVASLIALSLIIKHKES 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K + +L Y + + ++P + ++
Sbjct: 64 FFGKRENQKILILRSLFGTLGIVL------NFYTIDKLVLSDANMLNKLSPFFVIIFSAL 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E++N QI + ++ L L + S + A+A A A + G
Sbjct: 118 FLSEKINTKQIASLIIAFLGALFIIKPSFNLEVISALAGVGGAIFAAAAYTCLRVLGGKE 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+ + F + + + +LI G+ S + K A
Sbjct: 178 KHYTVVFYFSTFSSIVLFPFMMMSYKSMTMMQLTYLILAGVFASVGQFGVTLAYKYAAAK 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ I +Y+ L + S+ I D + I + I+ A +
Sbjct: 238 EISIFDYSNILFSAIISLVIFGALPDYLSVIGYVIIFAASL 278
>gi|257055606|ref|YP_003133438.1| DMT(drug/metabolite transporter) superfamily permease
[Saccharomonospora viridis DSM 43017]
gi|256585478|gb|ACU96611.1| DMT(drug/metabolite transporter) superfamily permease
[Saccharomonospora viridis DSM 43017]
Length = 327
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 81/282 (28%), Gaps = 8/282 (2%)
Query: 32 CAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+LW + + + +V S + R+ + + I + L L +
Sbjct: 24 VTMVLWSSAFVGIRAIGEVFSPAPLALLRLAVASVTLTVLIGSSTRRLPPLPRDRTSWLF 83
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ + L + A L + + P++ F V L E ++
Sbjct: 84 --VASYGVLWLCCYTVALNAAELHLDAGTAALLVNIAPLLVTFGAGVVLAEGFPRPLLLG 141
Query: 151 ALLIILSLLIMTLHSGIPLLS-----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + ++I+ L + +A A + + + I I
Sbjct: 142 GSIGMSGIVIIGLGTDGEGDWIGVALCLLAAVLYAAGVLIQKKALDRIDATTITWLGCLI 201
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ W E + + F ++Y +KR + + + Y
Sbjct: 202 GTAVLLPWTPRLASELATAPTSAVLGAVYLGVFPTAIGFSTWAYALKRTEAGRLSVSTYA 261
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
P L +V S +L + + + + + V
Sbjct: 262 VPALSVVLSWVLLAEVPTGYGLVGGVVCLAGVAVSRYRPRRA 303
>gi|229591986|ref|YP_002874105.1| hypothetical protein PFLU4581 [Pseudomonas fluorescens SBW25]
gi|229363852|emb|CAY51312.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 319
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 82/275 (29%), Gaps = 1/275 (0%)
Query: 35 ILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
+ W +P+ L S ++ R L + + + G ++D
Sbjct: 18 LCWAYSPIGVHMGLHSYSPGQLALLRFLIASVFMAGVALVLGIGRPRVRDLPWLLVLSFF 77
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
VF + F+ A + ++ + V V L L + +L
Sbjct: 78 GVFLHHTSLNYGQQFVTAAASSVLAQSAPLFSVLLAFFCLKERVSLWRWSCVLLGLLGVL 137
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
+++ L + +A + FA + + ++ L V
Sbjct: 138 VVIWGDHGVGDIDPRGLLILLAAVSWSLYFAIQKHYAHRYSPLTMACYMVWAGTLMLCVN 197
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
+ L+ ++ + + Y +K ++S + Y P + +
Sbjct: 198 LPGLPSAVMKAPLPENLAVLVLGIFPSALAYLAWGYVLKHVEVSRASVAMYLIPPVAMTM 257
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ +L + I + IV+ ++ L S
Sbjct: 258 AATLLGEHIALQVVLGGVIVLASVAAISLEGRWRS 292
>gi|225568407|ref|ZP_03777432.1| hypothetical protein CLOHYLEM_04484 [Clostridium hylemonae DSM
15053]
gi|225162635|gb|EEG75254.1| hypothetical protein CLOHYLEM_04484 [Clostridium hylemonae DSM
15053]
Length = 297
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 81/293 (27%), Gaps = 8/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L++ C+ + + ++ + + ++ R L + I + L
Sbjct: 11 SGKQKYKGILYIVCSAFCFSLMNMFVRLSGDLPSVQKSFFRNLVAFFFALIMIRREAVPL 70
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LK + V YA+ S ++P V
Sbjct: 71 RCRAGNLKYLLLRSL------FGTVGILCNFYAVDHLVLADASMLNKMSPFFVVVFSIFI 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKER+ ++ L + S + L + + A
Sbjct: 125 LKERVTVPHMLFVGGAFAGSLFVIKPSFSNMDLLPSLIGLAGGLGAGAAYTFVRKLSLRG 184
Query: 199 EMCVLAIPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
E L + + ++ + L+ GL + + A
Sbjct: 185 EKGPLIVCFFSAFSCLATLPFLIYGYEPMSLRQIVLLLFAGLAAAGGQFGITAAYSHAPA 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +Y+ + + + + Q D + + + ++ V+ +
Sbjct: 245 REISVYDYSQIMFSALLGLLVFGQVPDALSWLGYAVICTMAVLMFFYNLKREK 297
>gi|319891735|ref|YP_004148610.1| Integral membrane domain protein [Staphylococcus pseudintermedius
HKU10-03]
gi|317161431|gb|ADV04974.1| Integral membrane domain protein [Staphylococcus pseudintermedius
HKU10-03]
Length = 293
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 98/295 (33%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L + + I + ++ + + V + R ++ F I+ +
Sbjct: 2 NTKVKGILAILISAIGFSFMAVFFRLSGDLPVFQKSLARNFVAMFIPLFFILKYKQPF-- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +LV + + + IYA+ + P ++ L +FLK
Sbjct: 60 ----FGKLSSQPLLVTRSVLGLMGVLLNIYAIDHMVLSDADILMKLNPFWTILLSLIFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + QI + ++ I+ +L + + AI S A V +
Sbjct: 116 EFIQKYQITSMVIAIIGMLFVVKPEFSSDVIPAIVGLLSGVFAASAYTAVRALSTREAPY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + F V+ F ++ ++LI GL + + A +
Sbjct: 176 TIVFYFSFFSVIVLIPFVAFTFEPMSLIQIVYLILAGLSAAVGQIGITVAYSYAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I Y + + + + D I + I++ A Y+ S +K ++
Sbjct: 236 IFTYASIIFTATIGFILFNESPDFYAIIGYIIILSASY-YMFEKARRSTSSKHRQ 289
>gi|310828357|ref|YP_003960714.1| hypothetical protein ELI_2770 [Eubacterium limosum KIST612]
gi|308740091|gb|ADO37751.1| hypothetical protein ELI_2770 [Eubacterium limosum KIST612]
Length = 311
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/304 (12%), Positives = 88/304 (28%), Gaps = 20/304 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G + F ++WG T + T+ L ++ +E++ R ++
Sbjct: 6 KSTSFGHIAAFFTIVIWGTTFIATKVLLRVLTPVEILFCRFFLGYLILWLV------TPK 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ + + M + LT + ++F
Sbjct: 60 GLRLDNRRQEFYFMAAGLLGVTLYFLLENFALTLTLAANVGVIIAIAPFFTALFDYFFLH 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP---------- 189
ER I ++ I + +++ + +
Sbjct: 120 GERPGPRFFIGFIVAITGICLISFRGDNTVQLNPAGDLLAITAAVVWAGYSTFTKKISSF 179
Query: 190 -VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G+ + + + GF F+ L ++ F ++
Sbjct: 180 GYGTILTTRRIFFYGLLFMVPALFIFGFHLDLSVFIEFKNLANILFLGFGASALCFVTWN 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K + Y P++ +V+SV IL + I + G+ + + + + +N
Sbjct: 240 LAVKLLGPVKTSVYIYMVPVITVVTSVIILHEHITLPAILGIGLTIAGLFLS--ESRLNF 297
Query: 309 GKNK 312
+ K
Sbjct: 298 KRQK 301
>gi|187919025|ref|YP_001888056.1| hypothetical protein Bphyt_4309 [Burkholderia phytofirmans PsJN]
gi|187717463|gb|ACD18686.1| protein of unknown function DUF6 transmembrane [Burkholderia
phytofirmans PsJN]
Length = 301
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 16/301 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L+ A I G T + ++ + + + R + P A+ +
Sbjct: 2 NSRYAGYLYCALAMIGVGSTVVVSKPIAAGLPPFSATALRFAIAFPLFVLAMRWRGVRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + ++ + + I + P +S + + L
Sbjct: 62 RLD----RRDTLLVIAQAGAGSVGYTVLLISGMKLASAADAGVIAGTLPAVSAGVAVLAL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----------AIAVTWSAYCFARKTI 188
ER I A LL +L+ T+H G +A+ A
Sbjct: 118 GERPAPALIGAILLATAGVLVCTVHPGEFSAPHAVSSLAGNALVFLAIVCEALFILLNRK 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + I +V F + L + F ++
Sbjct: 178 LSTAVAPLPLSALMCGIGFAVALVPACFEKPWALPVDASALGGVLYYALVPTVVGFVLWY 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G R + G+M P+ + + +L +P+ + V+ A+++ +
Sbjct: 238 AGAARISGAEAGLMTALVPVSAVALAAMVLGEPVSAAQLAGVACVLGAVLLATFGQLRMR 297
Query: 309 G 309
Sbjct: 298 R 298
>gi|228994383|ref|ZP_04154265.1| Permease, drug/metabolite transporter superfamily [Bacillus
pseudomycoides DSM 12442]
gi|228765359|gb|EEM14031.1| Permease, drug/metabolite transporter superfamily [Bacillus
pseudomycoides DSM 12442]
Length = 307
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 48/284 (16%), Positives = 104/284 (36%), Gaps = 18/284 (6%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A ILWGI T++ LE + ++ R+ ++ ++
Sbjct: 1 MLLIAIILWGIAIAPTKWALESIQPFTLLFLRLCFAGGICLLFFF----QQLRKSIVNRD 56
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ V S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 57 VPWKRISVLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEKIQLNY 116
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGSSE 194
I +L + ++ +T+ SG S ++ A ++ + +
Sbjct: 117 WIGIILGFIGVICITIPSGNDNQSASLVGDILILLSTFLFAFYTILLKRPKQEKNLSNEV 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + AI + V F G F + ++ ++R
Sbjct: 177 FTTLTLIIGAIILFPFAVIETFYYGLPQIETWKTGLSFTYLVVCATILAYWFWNKALERI 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S G+ PL+ I++SV +LK+ + I +V+ ++
Sbjct: 237 SASVSGLYLNALPLISIIASVILLKESLTWKILIGGCLVLFGVI 280
Score = 40.3 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 46/131 (35%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
IA+ A + S + F + L +++ + ++P
Sbjct: 4 IAIILWGIAIAPTKWALESIQPFTLLFLRLCFAGGICLLFFFQQLRKSIVNRDVPWKRIS 63
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + F SYGI V I++ PL+ I+ S LK+ I I +
Sbjct: 64 VLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEKIQLNYWIGIILG 123
Query: 294 VIAMVVYLLPT 304
I ++ +P+
Sbjct: 124 FIGVICITIPS 134
>gi|290894368|ref|ZP_06557332.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290556075|gb|EFD89625.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 319
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/311 (12%), Positives = 98/311 (31%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLILLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
L+E++ +++ L I + ++ L +G + +++ A ++
Sbjct: 117 FLLREQIGAWRVLGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIVKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + F ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFVFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|237735607|ref|ZP_04566088.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229381352|gb|EEO31443.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 290
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 86/286 (30%), Gaps = 4/286 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + A + ++ + + ++ R L + FF ++
Sbjct: 6 NNIRKGMMCIILAAFFFAAMNVFVKLAGDLPSIQKSFFRNLVAALFAFFILL---KSKQG 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + T+ + + + LL + + +I L
Sbjct: 63 FTYKQKDLPMLLLRSVFGTLGILCNFYAVDHLLVSDASMLNKLSPFFVIICSSLFLKEKA 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R+ + II A + L ++ + + + S+ + A + +G
Sbjct: 123 TRIQKISIIVAFIGSLFVIKPSFNLLNNVDSIIGVLGALGAGIAYTCVRKLGKQGVNGAK 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V + + + + + L G GL+ + + A +
Sbjct: 183 IVFFFSCFSCLSVLPYLIINYQPMSLEQFLILL-GAGLMAAGGQFAITAAYNNAAGKDIS 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I +Y+ L + L Q D + + I++ A + L
Sbjct: 242 IYDYSQILFAAILGFIFLNQIPDIWSIVGYIIIIGAALGVYLYQRR 287
>gi|15597824|ref|NP_251318.1| hypothetical protein PA2628 [Pseudomonas aeruginosa PAO1]
gi|218891211|ref|YP_002440077.1| putative permease [Pseudomonas aeruginosa LESB58]
gi|254235613|ref|ZP_04928936.1| hypothetical protein PACG_01541 [Pseudomonas aeruginosa C3719]
gi|9948695|gb|AAG06016.1|AE004691_7 hypothetical protein PA2628 [Pseudomonas aeruginosa PAO1]
gi|126167544|gb|EAZ53055.1| hypothetical protein PACG_01541 [Pseudomonas aeruginosa C3719]
gi|218771436|emb|CAW27203.1| putative permease [Pseudomonas aeruginosa LESB58]
Length = 296
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 8/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S+ G + + + + + + V+ V+ R L + +
Sbjct: 6 SQPQRRNSPTQGAAMLALSALFFALMGGLIREASSTVNNETVVFFRNLVGVLFFLPLALT 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + L + T + YAL + PV +
Sbjct: 66 RGIGPLRTRRPLSHLLR-------TTYGLGGMYCYFYALAHLPLTDAMLFSYAAPVFTPL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +++KE L ++A L+ L +L++ SG + +A+ S+ A + +
Sbjct: 119 IAHLWIKEPLTRRMMVATLVGFLGVLLVARPSGAVVAPIALVGIASSLMAACAFVSIREM 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ ALF +++ + N + L L+G GL S S
Sbjct: 179 SDSEPAYRIVFYFALFGTLFSAVPLAWAWQPLNGQELLLLLGAGLFASLGQLTMSQAYAL 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +G + Y A + V + + + ++ A ++ LL
Sbjct: 239 ASPGVIGPIAYMAIVFAGVIAWLRWDELPSHTSLLGAALIFAASLIPLLGNRPAER 294
>gi|304437139|ref|ZP_07397100.1| DMT superfamily drug/metabolite transporter [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369801|gb|EFM23465.1| DMT superfamily drug/metabolite transporter [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 292
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 84/282 (29%), Gaps = 6/282 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G+L + A WG T + +E + + R + + + G
Sbjct: 2 RLRGSLMLLAAAFFWGTTFVAQILGMEGLGPYTYAATRFALGTLFMTALWLLYRGQRKAQ 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + V ALL+ T+F ++ V L +V L
Sbjct: 62 RRAGTFHSGFRAGIPVGLAMFVGVTLQQVALLSTTAGKTAFIT-TLYIVLVPLAAVLLGH 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFF 197
R+ +Q ALL L + ++ + L + + + +
Sbjct: 121 RIRAVQWGGALLAFLGVYFLSAYGETTLNQGDVLVFLCAFFWMVQILLIDRFARMVDAIE 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + I L + + + L + G + +
Sbjct: 181 LCLMEMLICTLGSALLAVCFETCTWAALSAAAVPIGYAGILSCGVAYTCQILGQAHVEPT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ + V+ +L + + V+ + +++ V+
Sbjct: 241 QAAILMSMEAVFAAVAGWAVLGETMSAVQVLGCALLLAGAVM 282
>gi|294782824|ref|ZP_06748150.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
1_1_41FAA]
gi|294481465|gb|EFG29240.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
1_1_41FAA]
Length = 287
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 95/283 (33%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R SL F + + +
Sbjct: 4 SNKTKGVFWMLVSVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSLMLSAFILFRQKESIKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + + + + YAL + ++PV +FLK
Sbjct: 64 EKA------NIPFVFGRSFFGFIGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ Q+I +L++L+++ + S P + ++A +SA + G
Sbjct: 118 ERVDKKQVIGIILMLLAVVFVIKPSFSPEVIPSLAGLFSAVLAGFSYTIIRYLNGKVKSE 177
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L + + L G G+ + +Y A S V
Sbjct: 178 INVFYFSLLSVICTFPLMMMNFVKPTLNEFLILLGGIGISAAMGQFGLTYAYTFAPASEV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYL 301
I Y + + + D I I++ A+ +Y+
Sbjct: 238 SIYNYVIIITSMFMDYVLFSTIPDLFSFIGGFIIMTTAIYLYI 280
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 33/76 (43%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
F+ G Y ++ ++ ++ +P+ + + + LK+ +D + I
Sbjct: 68 IPFVFGRSFFGFIGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLKERVDKKQVIG 127
Query: 290 FGIVVIAMVVYLLPTV 305
++++A+V + P+
Sbjct: 128 IILMLLAVVFVIKPSF 143
>gi|196043480|ref|ZP_03110718.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
03BB108]
gi|229184901|ref|ZP_04312092.1| Uncharacterized transporter [Bacillus cereus BGSC 6E1]
gi|196025789|gb|EDX64458.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
03BB108]
gi|228598554|gb|EEK56183.1| Uncharacterized transporter [Bacillus cereus BGSC 6E1]
Length = 303
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGSIQFNSGGLFILLATVSESLFFVFQTAYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|332284932|ref|YP_004416843.1| rarD protein [Pusillimonas sp. T7-7]
gi|330428885|gb|AEC20219.1| rarD protein [Pusillimonas sp. T7-7]
Length = 307
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 56/298 (18%), Positives = 112/298 (37%), Gaps = 3/298 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + L+ YT L ++ EV + RVL LP + I G +
Sbjct: 2 QSMRQGVALSVLSSFLFATLYYYTTVLPPLTGTEVFAWRVLLCLPVLALVIYRARGWPEI 61
Query: 81 LKDTLKNPK---AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + +L+ SAT++ + F +A L ++G S YF+ P++ V LG +
Sbjct: 62 SAVYVRLRQEPVLWLLLLLSATLIGMQLWLFAWAPLNQKGLDVSMGYFLLPMVMVLLGRL 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F ERL+ +Q +A L+ + + SG + A+ + F + S
Sbjct: 122 FYGERLSRVQTMAVLVAAVGVSHELWRSGSFSWATALVMFGYPPYFMLRRRLRMGSLSAL 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ P +++++ F + GL++S + + L
Sbjct: 182 WFDMLFVAPGALFILFSQDLSVLEQFSRFPRLFGQVPLLGLISSAALVAYISASRMLPLG 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
GI+ Y P+L+ + L + + + + IA+++ + + K
Sbjct: 242 LFGILGYVEPVLLFWVAFLFLHEAVSYQAWFTYVPIWIAVLLIAGEGAMVWRLSANAK 299
>gi|163938401|ref|YP_001643285.1| hypothetical protein BcerKBAB4_0391 [Bacillus weihenstephanensis
KBAB4]
gi|163860598|gb|ABY41657.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 330
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKALGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K ++ + + F + G + + + L
Sbjct: 88 MKFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 143 LYKDDALNRRKVIGVAIGFCGVILVNVPSDGSLSFHFGIGSLLLLGAAMMYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + F G F N+ L LI L++ FCI++
Sbjct: 203 GSKTLDIGYMTAYQMIFGSIGLLCIGAFQVGMMPFTFNLHAILMLIYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSLILGEAIHSFVLFGLACVAAGIIVVNRNPVKKK 322
>gi|288961561|ref|YP_003451871.1| hypothetical protein AZL_c00340 [Azospirillum sp. B510]
gi|288913841|dbj|BAI75327.1| hypothetical protein AZL_c00340 [Azospirillum sp. B510]
Length = 331
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 94/295 (31%), Gaps = 8/295 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
++ T G L + L+ + ++L V +++ R L+ L + I
Sbjct: 33 TAASATDTRPGILMMLGGMTLFTLNDALGKWLVADHPVAMLVAVRSLFGLAVLAPMI--- 89
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + ++ V G F +A+ Y P+I L
Sbjct: 90 ---WRDGVAAVFAVDRLPLHILRVVLMTVDIGCFYWAVGYLPLADVMTIYMSAPLIVTAL 146
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L E + + +A L+ ++I+ +G L ++ A+ F+ I
Sbjct: 147 SVLVLGETVGWRRWVAVLVGFAGVVIVLNPTGRFDLWPSLVALLGAFIFSSGVISTRMLR 206
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V + G + + L L G+ + + ++ +
Sbjct: 207 SASSLTLVGNQMVGGIL-IGGVALPWSWAAPGWLGFLLLGLLGVTALAGHAMMNRSLQLS 265
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ V +Y + L +V + + + +++ + + + +
Sbjct: 266 PAAVVVPFQYVSILWAVVLDLLVWGTAPTLRMAVGAALIIGSGLFIVYREQRLNR 320
>gi|228959565|ref|ZP_04121248.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228800134|gb|EEM47068.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 294
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 100/293 (34%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G +++ A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAIYLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPACMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWEFQSNPIEHMNMYVLLGILYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELLDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|256821484|ref|YP_003145447.1| hypothetical protein Kkor_0258 [Kangiella koreensis DSM 16069]
gi|256795023|gb|ACV25679.1| protein of unknown function DUF6 transmembrane [Kangiella koreensis
DSM 16069]
Length = 328
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 102/296 (34%), Gaps = 19/296 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
++K M G + A +LW + + + + + + + R++ + + F +
Sbjct: 1 MTKLPQKQLAMAGLIL---AVVLWSASFVAMKLAIAEFGPIMTVFLRMILATAVLIFFL- 56
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + +L+ + +++ F YAL + P++
Sbjct: 57 ----PPMAKKQQYQKGDWWLLLLLALCEPCLYFIFESYALTYTTASEAGMVTALQPLMVA 112
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL----------SLAIAVTWSAYC 182
LKE+LN +I ++ ++ ++ +TL + + YC
Sbjct: 113 VGAYYLLKEKLNSRLLIGCIIAVVGVVWLTLAGTSSEHASNPMLGNALEFGAILAATGYC 172
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + S F + + F + +F + + +N F
Sbjct: 173 LLARKLAQRYSPIFLTLLQTVMGSIFFLPLIFVQGAPLNFDVSAEAVLAIMFLAFGVNIF 232
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
F +++ K S VG + PL + +L + + ++ + G+V+ ++
Sbjct: 233 AFTCYNFAFKTMPASQVGSLMNLLPLGTLFFGWALLGETLSGMQYLAAGLVLFGVI 288
>gi|222096193|ref|YP_002530250.1| transporter, drug/metabolite exporter family [Bacillus cereus Q1]
gi|221240251|gb|ACM12961.1| transporter, drug/metabolite exporter family [Bacillus cereus Q1]
Length = 303
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 88/288 (30%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPNLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VF E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAVLAFVFFNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGSIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|114763492|ref|ZP_01442897.1| Putative transporter, RarD family, DMT superfamily protein
[Pelagibaca bermudensis HTCC2601]
gi|114543772|gb|EAU46784.1| Putative transporter, RarD family, DMT superfamily protein
[Roseovarius sp. HTCC2601]
Length = 303
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 104/301 (34%), Gaps = 12/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + G + IL+ I + + V E + R ++LP + +++ +
Sbjct: 1 MTPLRGIALKITSVILFVIMSSLIKAADSVPTGEAVFFRSFFALPVIIGWLLWRGDMATG 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + + V + GF AL + + P+++V G++ L
Sbjct: 61 LRAKKPS-----LHVLRGIVGVSAMGFNFAALTLLPLPEVTALGYAAPLLTVIFGAILLG 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA------RKTIPVGSSE 194
E++ ++ A + I + ++ + + A I +
Sbjct: 116 EQVRLFRLSAVAMGIFGVGLVMWPLLTVSEMNDTVLLGIGFVMASAVLRALVQIHIRRMV 175
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ + V + + + + + P+TL LI GL+ + + A
Sbjct: 176 QTEQTSAIVFYFTMTSTVLSLLTIPFGWVMPSGPETLMLIAAGLIGGVAQICITSAYRGA 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYLLPTVINSGKNKT 313
+ + +Y + L I+ + + + + +V+ + + L + +N+
Sbjct: 236 EAGLLAPFDYASILFAILIGYVVFAEVPTALMLLGSAVVISSGVAIILRERYLGLQRNRA 295
Query: 314 K 314
+
Sbjct: 296 R 296
>gi|134298450|ref|YP_001111946.1| hypothetical protein Dred_0579 [Desulfotomaculum reducens MI-1]
gi|134051150|gb|ABO49121.1| protein of unknown function DUF6, transmembrane [Desulfotomaculum
reducens MI-1]
Length = 294
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 98/278 (35%), Gaps = 13/278 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G +F+ A + + P++ + +S +V R + + I+Y
Sbjct: 1 MHKHRGIIFLIAAITFFSMMPIWVKLAYTTGLSAFDVTFLRSGMAAAMLGIFILYRKINF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + L L ++AT+++++ + + + +++ PV+ + L
Sbjct: 61 HVERQQLGPLLLSSTLGYTATMISLYLSYK-----YVSAGVATSLHYLFPVLVMLLEYFI 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
E+L + +A L + + ++ G + AV ++ Y + +
Sbjct: 116 YHEKLQFYKWMALLTSLAGIYLIAEPGGSSFSLRGVGLAISSAVFFTFYVLSINHPQLKK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + I ++ +V G L + + F G++
Sbjct: 176 MDSLVLAFYDCLIASITSLVLLVAQGNWPLTLTLKGLYYTGLVSFFCTALALIFFIKGVQ 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ I+ P+L +V+ + IL +P+ ++
Sbjct: 236 SIGSANASILSTLEPVLSLVAGIIILHEPLTWYTSLGC 273
>gi|229065738|ref|ZP_04200962.1| hypothetical protein bcere0026_57370 [Bacillus cereus AH603]
gi|228715556|gb|EEL67357.1| hypothetical protein bcere0026_57370 [Bacillus cereus AH603]
Length = 284
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 79/289 (27%), Gaps = 16/289 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L + A LW + ++L + + + + R S + + L L K
Sbjct: 2 KKGILLLIFATFLWAGNYICGRYLGPALPPILLNTIRWTISTIILMCLLTLKKQRLPLFK 61
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + L T P++ + LKE+
Sbjct: 62 SWK------EFSIQGFLGVYAFSTLNYLGLQTISASRAGMISAGIPIMILLFTPFILKEK 115
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVGSS 193
+ I AL+ I+ ++++ + ++ V W Y K
Sbjct: 116 IKTKAWIGALVSIVGVIVLIQGKSSNPMESSLVGDVEILLSCVAWGLYTVFGKKYGKNID 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ G L N + + + ++ G+K
Sbjct: 176 PLVMTAGAAFYGTIFSAISCIGTVQTNMIHLTNSAWICIIYVSTFASVIAYFAWNTGVKI 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+ ++ + +L++ I I I + ++ L
Sbjct: 236 VGAGRAAPYINLLPVWTVLLGILLLQEQISITTVIGGLITIFGAILASL 284
>gi|291547034|emb|CBL20142.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Ruminococcus sp. SR1/5]
Length = 319
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/319 (10%), Positives = 88/319 (27%), Gaps = 27/319 (8%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N+ + +L + A +WGI + +E V R L + + +
Sbjct: 2 NSQKMPLKNSLCLLLAATIWGIAFVAQSVGMEYVGPFTFNGVRSLIGAAVLVPVLFILNR 61
Query: 77 ---------------------GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTR 115
++ + + L F + +
Sbjct: 62 SGNKSSAATDSAIPESSSTPSEKAVSPTPYNSRDLWLGGIACGFALFAASNFQQFGIQYT 121
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA 175
F VI +G K+ + A ++ ++ L ++ + G + I
Sbjct: 122 TVGKAGFITACYIVIVPIIGIFLKKKC-SPFIWAAVVMALVGLYLLCITDGFSIGLGDIL 180
Query: 176 VTWSAYCFARK----TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
V A+ F+ ++G + + + ++
Sbjct: 181 VLVCAFLFSLHILVIDYFSPKADGVKLSCIQFLVCGILSMIPALILEHPQISSILTAWLP 240
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
L + + + G K + ++ + +++ +L Q + +
Sbjct: 241 ILYAGVMSCGVAYTLQVVGQKNVNPTVASLILSLESCISVLAGWVLLDQKLSIKELLGCV 300
Query: 292 IVVIAMVVYLLPTVINSGK 310
I+ A+++ LP K
Sbjct: 301 IMFAAIILAQLPEKEKDNK 319
>gi|260778814|ref|ZP_05887706.1| permease [Vibrio coralliilyticus ATCC BAA-450]
gi|260604978|gb|EEX31273.1| permease [Vibrio coralliilyticus ATCC BAA-450]
Length = 290
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 89/287 (31%), Gaps = 12/287 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ L G+ ++++ ++ + + R + + + LSL
Sbjct: 11 LVATTALAGLGWIFSKETIQGLPPFGFVGLRFVVASICLLPFCFKSLKQLSL-------K 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + + ++ +F ++ +I + KER
Sbjct: 64 QLTQAMGGGCILALALLAWVHAIAVSETLGEGAFIVSLSMIIVPIVAWALYKERPKRAFW 123
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEGFFIEMCVLA 204
IA + + L ++L + + +A F + + + L
Sbjct: 124 IATPIAVSGLAFLSLQGEWNSSAGQLWFLANACLLALHFNVNSRLAQNLPVLTLTCIQLF 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + +V + + F L S + + + G K + ++
Sbjct: 184 VTGVIALVASALFETVPVSVDASIWGWFAASAVLATSLRYVMQTLGQKHSNPGNAALIML 243
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ ++ S+ + + + + ++++A++ Y + K
Sbjct: 244 LEPIWTVILSILWYGEQLSANKLLGCSLILLALIFYRTDGRLLKLKR 290
>gi|311108464|ref|YP_003981317.1| hypothetical protein AXYL_05302 [Achromobacter xylosoxidans A8]
gi|310763153|gb|ADP18602.1| hypothetical protein AXYL_05302 [Achromobacter xylosoxidans A8]
Length = 318
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 83/299 (27%), Gaps = 13/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M G ++ A +L G T ++ + + + R +LP + L
Sbjct: 2 NNRMRGYCYLAAAMVLVGSTVAASKIIGTGLPPFTATALRFAIALPCFVLLMALTGARLP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + ++ + + I L P++S + + L
Sbjct: 62 RLD----RRDWLLLVAQATAGSVGYTTLLIAGLQRASAVDGGIILGTLPLVSAAIAMLLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVG 191
ER + A + + +M HS + ++ AV
Sbjct: 118 GERPGKATLAAIVAAAFGVWLMMHHSAGAGGASSLVGNALILGAVLCEGLFILLNKRLRQ 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + F V + L + F ++ G
Sbjct: 178 PVAPLALSTLMTGFGLAFSAVASVAEAPWTLGLPAPALAAVAYYALVPTVGGFLLWYAGA 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
R + + AP+ + + +L + + + V+ A+V V + GK
Sbjct: 238 ARVNGAEAALFTALAPVSAVALAAGLLGESLAPAQLAGMACVLGAVVALGWSGVRSRGK 296
>gi|332358315|gb|EGJ36141.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis SK355]
Length = 352
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/295 (9%), Positives = 77/295 (26%), Gaps = 6/295 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ A + I +++ L V+ + + L + GV ++
Sbjct: 3 KQKTKTSAVILALLAAGFYAINTPFSKVLLNNVTPTFIAAFLYLGAGLGVGIMYLFHIKK 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + + F + + S V + + +
Sbjct: 63 EKKSERLTKQDLPYTIGMIGLD--IAAPIFLMIGIKMGTASNASLLGNFEIVATALMALL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSE 194
F KE+++ IA I LS ++++ + S+
Sbjct: 121 FFKEKVSRKLWIAIGFITLSSIVLSFEGSDSFQFSIGSFFVILATCCWGLENNCTRKMSD 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
E+ +L + ++ + ++ +
Sbjct: 181 KSTYEIVLLKGIFSGGGSFTIALLLGEKIPEMKYIAEVMLLGFVAYGLSIFLYIRAQRDL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ AP + + + + + I ++++ V + T+I
Sbjct: 241 GAAKTSSFYAIAPFVGSFLAFAVNGEKLALEYFIGLALMLLGTVFVVYDTMIQQH 295
>gi|319654326|ref|ZP_08008414.1| hypothetical protein HMPREF1013_05034 [Bacillus sp. 2_A_57_CT2]
gi|317394026|gb|EFV74776.1| hypothetical protein HMPREF1013_05034 [Bacillus sp. 2_A_57_CT2]
Length = 322
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/302 (12%), Positives = 90/302 (29%), Gaps = 17/302 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + LWG+ + L + + S R+L + VF + + +
Sbjct: 22 YILLISIMALWGLNVSIIKILVSYFPPVSITSLRILTAGITVFLILSIMGKVRKPSRKEI 81
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L + L + G L P+++ L S+ L+ +
Sbjct: 82 SYIVFGGLLSVVSHHLFLAIG-----LTGTSAVNGGLILGAGPLLTAILSSILLRNKPTG 136
Query: 146 LQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+Q++ LL + + L + + +++ A F + + + +
Sbjct: 137 IQVLGFLLGGAGVTFIVLSGNKGISSLTPGDFFVFLSILSQALSFIVISKASKTLDPRLL 196
Query: 199 EMCVLAIPALFYVVWNGFSGGE----HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+L + V F L + +++ I+
Sbjct: 197 TGYMLIFGGVILFVMASIMEPGGLKGITEAPAYVWAAFAASAVLATAIGHMVYNTAIRNI 256
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ I + S FIL + I + ++V ++ + + K
Sbjct: 257 GPAEASIFLNLNTFFSLAGSAFILGEVITINHMLGLVLIVGGVISGSGALEELVFRKRRK 316
Query: 315 KS 316
++
Sbjct: 317 EN 318
>gi|220903789|ref|YP_002479101.1| hypothetical protein Ddes_0512 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868088|gb|ACL48423.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 309
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 97/296 (32%), Gaps = 6/296 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MG + + +G+ PL++ L +S V+ +R + + ++ L
Sbjct: 1 MGFFYSMLSSAAFGLIPLFSLPLMARGLSPATVLFYRFFIASIVLGILLLLRGERLHTSG 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L + ++ A +L + ++ + + + + +I F
Sbjct: 61 RNLAKLTGMSLMYAMAALLFMQAFKYMPSGVAATLHFSYPVMVMLMMIIFFHERFSAVTA 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR----KTIPVGSSEGFFI 198
L + I+ + ++ + + + LA+A+ + + + G +
Sbjct: 121 LAVVLAISGVYLLSGGAQPGSVADMSMFGLALALASALCNAIYITSLCAARISNMTGLVL 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+A AL + + + L + + ++R +
Sbjct: 181 TFYVMAFGALCSLANSLATNSFQLLQSWQELALAALLAIVTAVLSNYTLILAVQRIGSTL 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+M P+ +V + + +P ++ +++V+ +L I + K
Sbjct: 241 AAVMGVLEPVTAVVVGILVFNEPFSLSLVTGLALIAVSVVLVMLGGHIRHLLERRK 296
>gi|33601876|ref|NP_889436.1| hypothetical protein BB2900 [Bordetella bronchiseptica RB50]
gi|33576313|emb|CAE33392.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 294
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 92/296 (31%), Gaps = 7/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
+ + ++G V ++ ++L + S ++++ R L ++P V
Sbjct: 4 TANTRAASPLIGIACVAVGIFCLTLSDAQAKWLGERYSPVQILFLRALIAMPVVLALTAS 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G +L + + I + FF L + F P+
Sbjct: 64 LGGRRALRTQYPL------VHLVRGAINVISATFFYLGLQALPLAENAAIAFAAPLFVTA 117
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L + LKER++ + +A +L++ + A+ +A +A + +
Sbjct: 118 LSVLVLKERVDAARWLAVAAGFAGVLVIVRPGSASFQAAALWPLATALLYAVMMLTARAI 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + +V + + + D F G L ++ + + G +
Sbjct: 178 GRGESMLTTMFYIVAGQLVCSAVAVAWFWTTPVWADLPFFAGVALFSTLGLTLITQGFRI 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S V +YT L + + D + + + + +
Sbjct: 238 GPASVVAPFDYTGLLWATLLGWLFWHETPDLLDCVGAAFIAGSGLYIAWRATSRRR 293
>gi|307546747|ref|YP_003899226.1| hypothetical protein HELO_4157 [Halomonas elongata DSM 2581]
gi|307218771|emb|CBV44041.1| protein of unknown function DUF6 transmembrane [Halomonas elongata
DSM 2581]
Length = 514
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 87/287 (30%), Gaps = 1/287 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A + G L C+ +L+ + + + +V + + + R ++L + +++
Sbjct: 219 AMDRPLAGILLRLCSGVLFTGMMVCVKVVSTEVPLGQTVFFRSAFALLPIVIFMIWRHEF 278
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + +A + A + + LG
Sbjct: 279 PRALATRRPAGHLLRSGLGAAAMFASFAAVARLPVAEATLLAQLAPVAMAVGGVFLLGER 338
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F + R L ++ + L + + L +A A + V
Sbjct: 339 FTRHRAAALALVLGGVAALVVPDLGNGEQAGRLPGYGLGILAALLTAGALVTVRRISRTE 398
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + + + + LI GL + ++ A++S
Sbjct: 399 TPASIAFYFVLVTALAGLATWPLGWVGVSGTTLSLLILAGLFGGAAHICMTLALRFAEVS 458
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ EY A + +++ + I P+ + +V+ + L
Sbjct: 459 RLAPFEYVALIWPVLADLLIFGLPLSPGFLVALPLVLGGAGLAALEG 505
>gi|259416375|ref|ZP_05740295.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259347814|gb|EEW59591.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 310
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 102/300 (34%), Gaps = 9/300 (3%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFA 70
K ++ + S P M G ++ + + +++ + E R L L +
Sbjct: 8 KEMASQPTSNP-MRGVFWMLVTGLNFVAVTALVKYMGPRIPPAESAFLRYLLGLVFLIPM 66
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
I L+ PK G+ + A+ + +A+ + +++PV
Sbjct: 67 I-------GSLRAVTWTPKLHGLFALRGGVHALGVIMWFFAMTRIPLAEVTAMNYLSPVY 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
++F+ E+L +I A + +L ++++ + +A+ + + F +
Sbjct: 120 VTLGAAIFMGEKLAFRRIAAVAVALLGVVVILRPGFREVSPGHLAMLVTGFAFGISYLLA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ G V+A+ +L+ V ++ + + L G + +
Sbjct: 180 KTMVGRTNPTVVVAMLSLWVTVALAPFALANWVTPTLYELTVLFGVACFATAGHYTMTLA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
A L+ + + + + + +D + +++ A+ + +
Sbjct: 240 FASAPLTVTQPVTFLQLIWATLLGALAFGESVDIWVVLGGSMILAAVTFITWREAVLKRR 299
>gi|114765132|ref|ZP_01444277.1| hypothetical protein 1100011001338_R2601_18208 [Pelagibaca
bermudensis HTCC2601]
gi|114542536|gb|EAU45562.1| hypothetical protein R2601_18208 [Roseovarius sp. HTCC2601]
Length = 285
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 88/282 (31%), Gaps = 8/282 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + + + L V E R ++ L + A L +
Sbjct: 1 MVVTGLCFVGVTALVKLLAGRVPAAESAFLRYVFGLVFLLPA-------WRSLAALRLSK 53
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ +G++ + +A+ + ++TPV L L ERL +I
Sbjct: 54 RQLGLVTLRGAAQTAGVICWFFAMTRIPIAEVTAMNYLTPVYVTILAVFVLGERLAMRRI 113
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A ++ + L++ L A+ +A F+ + G V+A+ ++
Sbjct: 114 MAIVVALGGALLILRPGFRELDPGHFAMLGTALLFSVSYLIAKIISGEMSAAVVVALLSI 173
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + + D L + + A ++ + + +
Sbjct: 174 TVTIGLFPFALNVWVTPSWGDLGILFLVACFATGGHYAMTLAFAAAPVTVTQPVTFLQLV 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ +P+D + I++ A++ + +
Sbjct: 234 WSVLVGALFFAEPVDPWVVMGGAIIMGAVLFITWREAVLKRR 275
>gi|225864656|ref|YP_002750034.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
03BB102]
gi|225789938|gb|ACO30155.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
03BB102]
Length = 303
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGSIQFNSGGLFILLAAVSESLFFVFQTAYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTDASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|256380509|ref|YP_003104169.1| hypothetical protein Amir_6523 [Actinosynnema mirum DSM 43827]
gi|255924812|gb|ACU40323.1| protein of unknown function DUF6 transmembrane [Actinosynnema mirum
DSM 43827]
Length = 313
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 81/289 (28%), Gaps = 10/289 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
N MG L ++WG + L+ + L +S +++ R + ++
Sbjct: 1 MNNPGSLVRMGVL-----ALVWGSSFLWIKVALTGLSPVQIALARTALGALTLVAVLLAS 55
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L K + + + + G + + +
Sbjct: 56 GQRLPRGKALWGHLAVAALFNNTVPFVLFAVGEQSVDSGVAGVLNATTPLWTLLLGLALG 115
Query: 135 ----GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
G L L+ G +A A AY + +T+
Sbjct: 116 TERGGGRARLAGLALGFAGVLLIFAPWERGGLASWGALACLVAAASYAVAYTYIGRTVSG 175
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + L + + + G E L P + L F +
Sbjct: 176 RGATSMQLSSAQLVVGSGLTALALPAGGLETPHLSWEPLLAVAVLGVLGTGLAFLLNYRL 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ + ++ Y P++ ++ L + ++ + +V+ + +
Sbjct: 236 IEDEGPTNATVVGYLLPVVSVLLGAVFLGEALNLRVVVGMAVVLAGVAL 284
>gi|167854825|ref|ZP_02477602.1| primosome assembly protein PriA [Haemophilus parasuis 29755]
gi|167854004|gb|EDS25241.1| primosome assembly protein PriA [Haemophilus parasuis 29755]
Length = 293
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 55/293 (18%), Positives = 116/293 (39%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G F A IL+G+ + L+ +S E+ R+ SLP V A+ F +
Sbjct: 2 IKGITFSVTASILFGVLYYLSTHLKPLSGEEIYGFRMWVSLPFVISALFIFKKNDEFNRY 61
Query: 84 TLKNPKAVGMLVFSATILAVH---WGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +++ T AV F+YA S Y + P+ V +G
Sbjct: 62 LKRLKQHPHLILVLLTTTAVTGSQMWLFLYAPNNGYAIDVSIGYLLMPIAMVAVGRFLFN 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ L+II+ + + + I + +G + ++ + F+ + S F+
Sbjct: 122 ETLSLLKIISIISASVGVFITLMTAGSLSWATSMVLIGYPVYFSLRKHFDMSHLSSFVCE 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L +P Y + N N L G+++ + ++ +G
Sbjct: 182 IILMLPIATYFMLNTDMQFVTENNPNFYFWLV--LLGIVSGTALIGYIMASSLVPINVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ Y PL ++ FI+ + +D I+ +++++ + +L +I K +
Sbjct: 240 LLSYIEPL-AMLIVAFIIGEVLDQSSYILMVCLMLSICLLVLDGIIAIRKQRR 291
>gi|118471639|ref|YP_885912.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118172926|gb|ABK73822.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length = 359
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/307 (8%), Positives = 86/307 (28%), Gaps = 24/307 (7%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFA 70
+ + +G LF + + +G + + + L S ++ R+ +
Sbjct: 9 HVDSTTSGNQFRLGLLFAVGSALAFGSSGPFAKALIEAGWSPTAAVTARLAGGALLMAIF 68
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ G ++ + +A F+ A+ + + PV+
Sbjct: 69 ATFARPGWVKEALQHSR----TVIAYGLIPIAGAQFFYYNAVAHLSVGVALLLEYTAPVL 124
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-----------LAIAVTWS 179
V K R + L ++ ++++ ++ + A +
Sbjct: 125 VVGWVWAVTKRRPSAGTFGGVALAVIGIMLVLDVFSGAHINLVGVGFGLAAAVCAACYFM 184
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-------NIPDTLF 232
V+ + + G
Sbjct: 185 MSNNVDSDGDGLHPYSLAAGGLVVGAVTVAAIGTTGIMPMTFATNPVKLGGFETSWVVPV 244
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ + + + + GI R K ++ + + ++ + ++ + + ++ + +
Sbjct: 245 IALGLIPTALAYTLGIIGIARLKPRFASLVGLSEVMFAVIIAWIMVGEAMTPIQAVGGAV 304
Query: 293 VVIAMVV 299
V++ + +
Sbjct: 305 VLLGLAL 311
>gi|229091688|ref|ZP_04222889.1| Uncharacterized transporter [Bacillus cereus Rock3-42]
gi|228691633|gb|EEL45385.1| Uncharacterized transporter [Bacillus cereus Rock3-42]
Length = 303
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 90/288 (31%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++L G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISLSQGGSIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|125532481|gb|EAY79046.1| hypothetical protein OsI_34156 [Oryza sativa Indica Group]
Length = 440
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 84/288 (29%), Gaps = 12/288 (4%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG + + + + V + R+L + + A G
Sbjct: 153 FFFWGTAMVAMKGVIPKTGPFFVAALRLLPAGALLVAFAAARGRRQPSGWAAWVAVAAFG 212
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
++ + + G + + S V + ++ G + L +
Sbjct: 213 LVDAACFQGFLAEGLQKTSAGLGSVIIDSQPLTVAVLAALLFGESIGAIGVGGLVLGVVG 272
Query: 153 LIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
L++L + ++ + A + + + + S ++
Sbjct: 273 LLLLEVPALSVEGNDTAIWGSGEWWMFLSAQSMAVGTIMVRWVSKYSDPIMATGWHMIIG 332
Query: 205 ---IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + G L L ++ + ++ Y R L+T+
Sbjct: 333 GLPLLVISVLNHDPALNGHLQELTLNDVLALLYTSIFGSAISYGVYFYNATRGSLTTLSS 392
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + P+ + L + V+ + ++A+ + +++
Sbjct: 393 LTFLTPMFASIFGFLYLGETFSPVQLGGALLTLVAIYMVNYKSIVGEK 440
>gi|330505579|ref|YP_004382448.1| hypothetical protein MDS_4665 [Pseudomonas mendocina NK-01]
gi|328919865|gb|AEB60696.1| hypothetical protein MDS_4665 [Pseudomonas mendocina NK-01]
Length = 305
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 89/287 (31%), Gaps = 18/287 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G LF + + + ++ + V + V+S R+ +LP +F +++ S G +
Sbjct: 12 GVLFAVLSATGFSLKAIFVKLSYAAAPVDAVTVLSLRMGLALP-LFAWLLWLSRGTGQAR 70
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ K+ V +L L F Y L L F P + + L + + ER
Sbjct: 71 LSAKDWAHVLLLGMFGYYL--SSLFDFYGLQYISAGLERLILFTYPTLVLLLQMLAMGER 128
Query: 143 LNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFARKTIPV 190
+A L L L I +H G + + Y I
Sbjct: 129 PGPRTFLALGLCYLGLGIALVHDIRVEGDSEQILLGAAWVFASAVTYALYYLGTGVVIRR 188
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S + + + L + L +
Sbjct: 189 VGSMRLAGLAGGASAIMVLVHYGLTRDPTQLLNLPAEVWLHGSLMALLSTVLPIYWMALA 248
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++R S + P+L + ++ +L + I + +V++ +
Sbjct: 249 VQRMGASHAALFGNLGPVLTLFAAWALLGEAITLYQIAGLALVLLGV 295
>gi|330505060|ref|YP_004381929.1| hypothetical protein MDS_4146 [Pseudomonas mendocina NK-01]
gi|328919346|gb|AEB60177.1| hypothetical protein MDS_4146 [Pseudomonas mendocina NK-01]
Length = 294
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 5/293 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + + G + A L+ +++L + +I + ++
Sbjct: 7 SGANHPLKGIGLMVLATFLFASHDAMSKYLSGFYPIILIVW-----ARYMVHTLLMAGIF 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + K G+ V A L F L+ + F+ P++ L
Sbjct: 62 LPQSGLRVLRTKRPGLQVLRALCLLGVSLLFTTGLMFIPLAEATSVIFLAPLLVTALSVP 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER++ Q A ++ + +LI+ G + +A CF+ I
Sbjct: 122 LLGERVSAGQWAAVIIGFIGVLIIVHPGGSLFTPAVLLPLSAALCFSFYQILTRRLSEVD 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + + +I L ++ G + ++ + A +
Sbjct: 182 SATTSNFFAGLVNTLVMSLLVPFFWHVPSITHGLMMLALGGCGMAAHLLLTHAFRHAAPA 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ Y + + + + K DT I I+ + + + S K
Sbjct: 242 LLAPFGYVQIVFAGLLGLLVFKHTPDTTALIGILIICFSGLAAAWQSRRQSRK 294
>gi|15598418|ref|NP_251912.1| hypothetical protein PA3222 [Pseudomonas aeruginosa PAO1]
gi|9949343|gb|AAG06610.1|AE004745_7 hypothetical protein PA3222 [Pseudomonas aeruginosa PAO1]
Length = 299
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 80/289 (27%), Gaps = 3/289 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +L+G+T ++ + L S ++ R L+++ +
Sbjct: 1 MNRRSALAALHGGALLFGLTGVFGK-LASASPGVIVFGRALFAVLALGLFARLAGQAWRA 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L A+ L+ + ++ + SF F + +
Sbjct: 60 LGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFRERIHL 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ +++ L++++ L AI + G
Sbjct: 120 AEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLANRSNSGQVG--PVQ 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + F+ E L + + +F + K T
Sbjct: 178 AALWQNLVVALCLLPFAVSELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKARTAA 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + + + + ++++A+V+
Sbjct: 238 LVFALEPVYGIAFAWLLFHETPGPRMFLGGALIILAIVLSARLGARGRK 286
>gi|229165409|ref|ZP_04293193.1| Transporter, EamA [Bacillus cereus AH621]
gi|228618007|gb|EEK75048.1| Transporter, EamA [Bacillus cereus AH621]
Length = 330
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKALGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K ++ + + F + G + + + L
Sbjct: 88 MKFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 143 LYKDDALNRRKVIGVAIGFCGVILVNVPSDGSLSFHFGIGSLLLLGAAMMYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + F G F N+ L L+ L++ FCI++
Sbjct: 203 GSKTLDIGYMTAYQMIFGSIGLLCIGAFQVGMMPFAFNLHAILMLVYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSLILGEAIHSFVLFGLACVAAGIIVVNRNPVKKK 322
>gi|83590063|ref|YP_430072.1| hypothetical protein Moth_1215 [Moorella thermoacetica ATCC 39073]
gi|83572977|gb|ABC19529.1| Protein of unknown function DUF6, transmembrane [Moorella
thermoacetica ATCC 39073]
Length = 299
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 96/295 (32%), Gaps = 19/295 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ ++ L + +W T + + L QV + R L + + +++
Sbjct: 8 PKTSTSIKDHLSLLLTVTIWASTFINIKIVLLQVPPNTLAFLRFLVASIVLGLHLIWRRQ 67
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+K + T + ++ L + + PV L
Sbjct: 68 PF------VKRQDWPLAGLTGLTGITLYNFLQNQGLKYAGATDAAILAAMAPVFIALLAW 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------------VTWSAYCFA 184
+ L+ER++ Q+ ++ +++ + L L A ++W+ Y +
Sbjct: 122 LLLRERISRRQVAGIIMAFSGSVLVATNGSPEGLVLNPARLYGDLLVLLTGLSWAVYSIS 181
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
K + + + +A + + S + L L ++ +
Sbjct: 182 LKRLLNRYTPVTVLTCSTIAGTIFLFPLALLESPINWAAVDISCWLNVLYLGLLASALAY 241
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I++ + R T G+ Y P++ + + L++ T IV++ +
Sbjct: 242 LIWNTVLTRVPAVTAGVYLYLLPVITAIIAALFLREIPGTFTITGGIIVLLGTYL 296
Score = 41.4 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 43/134 (32%)
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
L++ +T + + I + + + L V+ F+
Sbjct: 17 HLSLLLTVTIWASTFINIKIVLLQVPPNTLAFLRFLVASIVLGLHLIWRRQPFVKRQDWP 76
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
L + + + + G+K A + I+ AP+ + + + +L++ I +
Sbjct: 77 LAGLTGLTGITLYNFLQNQGLKYAGATDAAILAAMAPVFIALLAWLLLRERISRRQVAGI 136
Query: 291 GIVVIAMVVYLLPT 304
+ V+
Sbjct: 137 IMAFSGSVLVATNG 150
>gi|317492665|ref|ZP_07951092.1| integral membrane protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919415|gb|EFV40747.1| integral membrane protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 309
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 93/290 (32%), Gaps = 5/290 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A ++W + + ++ + + +R + +L + ++
Sbjct: 4 LFPLFAVLIWSMNAIVSKVSAGAIDPAAISFYRWVLALLVLTPFVLPGVVRNRKAIRPHL 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ L+ ++ + G L+S +T +IS++L + +
Sbjct: 64 GKLLILGLLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIWLLRIVPTVGIALG 123
Query: 147 QIIA----ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+++ L+ L GI L + ++Y + +
Sbjct: 124 SVMSFFGLVWLVSGGNPQELLTHGIGSGELMMFAASASYALYGVLTKRWNINLPNWQSLY 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ I ++ F ++ L L L + ++ G+ R + I
Sbjct: 184 IQIVFGVLLLLPNFLLTDNVSLNAQNIPLVLFAGIPASIIAPFLWIQGVVRLGANKASIF 243
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P+ + +V L + + + I GI ++ +V+ + K K
Sbjct: 244 MNLTPVFTAIIAVSFLHEQLHSYHIIGGGIALLGVVIAQRLRTPLARKKK 293
>gi|170728506|ref|YP_001762532.1| hypothetical protein Swoo_4181 [Shewanella woodyi ATCC 51908]
gi|169813853|gb|ACA88437.1| protein of unknown function DUF6 transmembrane [Shewanella woodyi
ATCC 51908]
Length = 297
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 109/297 (36%), Gaps = 9/297 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
A G L + A +L+G T L+++ + + L++ R L + + +
Sbjct: 1 MTQAESNRQSGLLELHIAVLLFGGTALFSKLI-PLGALDITLLRCLIAATALALLVKASK 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L L + K + + ++++HW + ++ + ++F PV++V +
Sbjct: 60 SRLRL-----DSSKDYFIAIGLGIVVSLHWVTYFASMQLSSVAIGMIAFFTYPVMTVLVE 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F + + II+ L+++ ++++ L +AI + + + R +
Sbjct: 115 PFFTGSPIKKVDIISGLVVLTGVILLIPEANLGNDVTLGIAIGILSAIFFTVRNLLHKRY 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + A+ + + E + + L+ + + +F+ ++
Sbjct: 175 FSAYSGSKAMFYQTAVAVIFLAPWHTIELGQIEQNVWWMILLLGVVFTAAPHALFTAALR 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
TV ++ P + ++ L + +D TI +VV + +
Sbjct: 235 HLSAKTVSLVSCLQPFYGAMLALLFLGETLDLKTTIGGFLVVATSIFETQQSRKQPK 291
>gi|21242548|ref|NP_642130.1| integral membrane protein [Xanthomonas axonopodis pv. citri str.
306]
gi|21108004|gb|AAM36666.1| integral membrane protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 303
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 95/294 (32%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ L++ + + +G+ + + ++ E+ R + L + I+
Sbjct: 3 TPAQVARRAALWMLTSTVAFGLMAITIRLASSTIATAEIAFFRNAFGLLALLPLILRPGK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + I +A+ + TP+ L
Sbjct: 63 PLPRTRQLPQ-------YFARTLIGLASMLCGFWAIGHLPLSQAISLSYSTPLFVTVLAV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V+L E++ + +A + +L++ + +A A I +
Sbjct: 116 VWLHEQVRLRRWLAVAAGFIGVLVILRPGSSTFTPGLLIALLAAVISAIVAIQIKQLSRS 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + ++L+ G+ + ++ +K ++
Sbjct: 176 DDSDTVVFYTYVFWVPMSLIPALFQWTWPQGIGWVWLVATGIFGTAGQLFWTRALKLGEV 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + + + L+ + ++ + I+ I I++ A V + + +
Sbjct: 236 SALQPISFMQLPLVALLGWWLFGEAIERHTVIGAAIIIGANVYIAHRETVLARR 289
>gi|22128715|gb|AAM92827.1| unknown protein [Oryza sativa Japonica Group]
Length = 440
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 84/288 (29%), Gaps = 12/288 (4%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG + + + + V + R+L + + A G
Sbjct: 153 FFFWGTAMVAMKGVIPKTGPFFVAALRLLPAGALLVAFAAARGRRQPSGWAAWVAVAAFG 212
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
++ + + G + + S V + ++ G + L +
Sbjct: 213 LVDAACFQGFLAEGLQKTSAGLGSVIIDSQPLTVAVLAALLFGESIGAIGVGGLVLGVVG 272
Query: 153 LIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
L++L + ++ + A + + + + S ++
Sbjct: 273 LLLLEVPALSVEGNDTAIWGSGEWWMFLSAQSMAVGTIMVRWVSKYSDPIMATGWHMIIG 332
Query: 205 ---IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + G L L ++ + ++ Y R L+T+
Sbjct: 333 GLPLLVISVLNHDPALNGHLQELTLNDVLALLYTSIFGSAISYGVYFYNATRGSLTTLSS 392
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + P+ + L + V+ + ++A+ + +++
Sbjct: 393 LTFLTPMFASIFGFLYLGETFSPVQLGGALLTLVAIYMVNYKSIVGEK 440
>gi|293604483|ref|ZP_06686888.1| drug/metabolite exporter [Achromobacter piechaudii ATCC 43553]
gi|292817064|gb|EFF76140.1| drug/metabolite exporter [Achromobacter piechaudii ATCC 43553]
Length = 327
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 87/286 (30%), Gaps = 13/286 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF-SGGLSLLK 82
G L +L+ + +F + + +I+ R+L+++P Y
Sbjct: 19 GILMAMLGAVLFSAKAIVVKFTYRYGIDAVTLIAFRMLFAMPFFAAVAWYQSRRAARGEI 78
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + V ++V + L L F++P + V L + + K
Sbjct: 79 VVMTTKERVQVIVLGLLGYYLSSFLDFLGLRYITASLERLILFLSPSLVVLLSAFWFKRP 138
Query: 143 LNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ Q +A +L ++++ H L A ++S Y +
Sbjct: 139 IERRQWLAMVLSYAGVVLVFAHDLSFGAGSEVLLGSLFVFGSATSYSVYLICSGELIKRV 198
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ +L + + +I L + + +
Sbjct: 199 GPTRLVAYAMLVSCVACIIQFFVIHSPSMLIQPAGVYGYSIIHATLNTVVPVFMLMWAVS 258
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
T ++ P+ ++ + + L +PI + +V+ +
Sbjct: 259 LIGAPTASLLGMMGPVSVLFLASWFLDEPITLWQMAGTALVLTGVF 304
>gi|206974104|ref|ZP_03235022.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
H3081.97]
gi|217960129|ref|YP_002338689.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
AH187]
gi|229139321|ref|ZP_04267893.1| Uncharacterized transporter [Bacillus cereus BDRD-ST26]
gi|206748260|gb|EDZ59649.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
H3081.97]
gi|217066209|gb|ACJ80459.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
AH187]
gi|228644177|gb|EEL00437.1| Uncharacterized transporter [Bacillus cereus BDRD-ST26]
Length = 303
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPNLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAVLAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGSIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|160879220|ref|YP_001558188.1| hypothetical protein Cphy_1069 [Clostridium phytofermentans ISDg]
gi|160427886|gb|ABX41449.1| protein of unknown function DUF6 transmembrane [Clostridium
phytofermentans ISDg]
Length = 305
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/290 (8%), Positives = 90/290 (31%), Gaps = 20/290 (6%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G +F ++WG T + ++ L + + +++ R + + + +
Sbjct: 3 RKTLGHVFALFTILIWGATFIASKMLLTEFTPFQIMLMRFIIAYVVLLIM--------NH 54
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + +++ AL + P+++ L
Sbjct: 55 KLHKIIWKDEIMFCLLAIFGSTLYFICENIALTYTLASNVGIIIALAPILTALLAHFTTH 114
Query: 141 E-RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIP 189
+ RL+ + + + ++++ + + L + + R
Sbjct: 115 DERLHKGIFLGFFVAFIGVVLVVFNGTVLLKLNPMGDILSLLAAVMWAVYSTLLKRCVHK 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L V+ ++ L + + ++Y
Sbjct: 175 YDGIYLTRRVVFYAILTTLPLVIKENKYFPLETLKEPKLFLSLMLLGILGSGICYVTWNY 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
K + Y P + +V++ +L +PI + + +++ +++
Sbjct: 235 ASKWLGIVVTNNYIYLNPFVTMVAAGVLLGEPITIMGLLGSALIIGGIII 284
>gi|288962210|ref|YP_003452505.1| transporter [Azospirillum sp. B510]
gi|288914476|dbj|BAI75961.1| transporter [Azospirillum sp. B510]
Length = 342
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 83/277 (29%), Gaps = 7/277 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M L V A + ++L + E+ R + V +
Sbjct: 53 MEPMRAILLVVLAVACLSCSDATAKYLARTLPPAEIAWMRYVVFTALVMPLAL------R 106
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ G+ + + FFI A+ + FV+PV L + L
Sbjct: 107 GGPLRVLRTMRPGLQILRGLGMLGSALFFIMAMRHLPLAEAAAISFVSPVFVTVLSILLL 166
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ + +A L+ + ++I+ + +A+ +A +
Sbjct: 167 NEKVGFRRWVALLVGLAGVVIVIRPGADGFQPAVLLPVLTAFSWALGLVATRKMTVRESP 226
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + AL ++ H + L GL+ + + ++ + S +
Sbjct: 227 LTTMVWSALTGLIALTALLPLHAVWPTPWEMLLGAFIGLVYTAAQWLLILAYRQGEASVL 286
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
Y + + D G+++ +
Sbjct: 287 APFTYVQLIWSTALGFLVFGAVPDQWTFAGTGVIIAS 323
>gi|18396278|ref|NP_566180.1| integral membrane family protein [Arabidopsis thaliana]
gi|16226571|gb|AAL16203.1|AF428434_1 AT3g02690/F16B3_32 [Arabidopsis thaliana]
gi|15010664|gb|AAK73991.1| AT3g02690/F16B3_32 [Arabidopsis thaliana]
gi|21593005|gb|AAM64954.1| unknown [Arabidopsis thaliana]
gi|22137110|gb|AAM91400.1| At3g02690/F16B3_32 [Arabidopsis thaliana]
gi|332640327|gb|AEE73848.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]
Length = 417
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 85/283 (30%), Gaps = 12/283 (4%)
Query: 34 YILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG + + + + V + R++ + + VY L + +
Sbjct: 132 FFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFA 191
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
++ + + G + + S V + S G R L + A
Sbjct: 192 LVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAG 251
Query: 153 LIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
L++L + +T G + +A A S+ + I
Sbjct: 252 LLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIG 311
Query: 207 ALFYV-----VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + G L L ++ + ++ Y + L+ +
Sbjct: 312 GLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSS 371
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + P+ + L + +++ + + ++A+ + P
Sbjct: 372 LTFLTPMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNFPE 414
>gi|323351035|ref|ZP_08086692.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis VMC66]
gi|322122759|gb|EFX94468.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis VMC66]
Length = 352
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/302 (9%), Positives = 81/302 (26%), Gaps = 6/302 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ A + I +++ L V+ + + L + GV ++
Sbjct: 3 KQKTKTSAVILALLAAGFYAINTPFSKVLLNNVTPTFIAAFLYLGAGLGVGIMYLFHIKK 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + + F + + S V + + +
Sbjct: 63 EKKSERLTKQDLPYTIGMIGLD--IAAPIFLMIGIKMGTASNASLLGNFEIVATALMALL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSE 194
F KE+++ IA I LS ++++ + S+
Sbjct: 121 FFKEKVSRKLWIAIGFITLSSIVLSFEGSDSFQFSIGSFFVILATCCWGLENNCTRKMSD 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
E+ +L + ++ + ++ +
Sbjct: 181 KSTYEIVLLKGIFSGGGAFTIALVLGEKIPEMKYIAEVMLLGFVAYGLSIFLYIRAQRDL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ AP + + + + + I ++++ V + T++ ++ K
Sbjct: 241 GAAKTSSFYAVAPFVGSFLAFAVNGEKLALEYFIGLALMLLGTVFVVYDTMVKHHLHEHK 300
Query: 315 KS 316
+
Sbjct: 301 HT 302
>gi|315924939|ref|ZP_07921156.1| DMT superfamily drug/metabolite transporter [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621838|gb|EFV01802.1| DMT superfamily drug/metabolite transporter [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 305
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/285 (8%), Positives = 82/285 (28%), Gaps = 7/285 (2%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI 71
+ + +G +++ + + + + + + ++ R +L +
Sbjct: 4 QRFTARIRQNEHALGIIYIVASAFCFSLMSFFIRRAGNLPTMQKAFFRNFVALLVATIML 63
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + + L+ A YA+ + + P +
Sbjct: 64 L------RTPEKFHMQKGSAPDLLMRALFGTCGLIANFYAIDRLGLADANVLNKMAPFFA 117
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ ++ L E+ N ++I + ++ L + + A+ + + V
Sbjct: 118 ILASALILNEKPNRIEIFSVIIAFTGALFVVKPTAGLASLPALIGLFGGFGAGTAYTFVR 177
Query: 192 SSEGF-FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ + F V+ + H+ L+ G+ + +
Sbjct: 178 KLGMHGERGPLIVFCFSAFSVLICTPTIIFHYVPMTPGQLGTLLIGGIAAAGGQLTVTAA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
A + + +Y L + + D I + +++
Sbjct: 238 YTHAPAREISVFDYAQVLFAALWGFLFFGEVSDIYSIIGYVLIIG 282
>gi|257454537|ref|ZP_05619795.1| Integral membrane protein DUF6 [Enhydrobacter aerosaccus SK60]
gi|257448099|gb|EEV23084.1| Integral membrane protein DUF6 [Enhydrobacter aerosaccus SK60]
Length = 320
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 106/315 (33%), Gaps = 13/315 (4%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWS 63
T+K N MG L V A I WG ++T +L +++ RV+ +
Sbjct: 2 TRKPAFGTNQSPNTRNHATMGGLQVIVAAICWGTLGIFTTYLHQLGFDSVQIAILRVVTA 61
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ + + L + + + + S + + A+ +
Sbjct: 62 AMMLLMLLPSLWTSIRQLSF----GEILQLSLQSLIGVLGMTVCYFIAVNFVGAGIAVSL 117
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF 183
+ P+ S+ L LKE + A + ++ + + TL L + S C+
Sbjct: 118 LYTAPIFSLVLAFFLLKEPITKKSFTLACIAVVGVALTTLSENFTLSWGIVFGLLSGVCY 177
Query: 184 ARKT-------IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
+ F +++ AL ++ + + F + I +
Sbjct: 178 SLYGILGKKALHKHYPPTLVFFSSVMISALALLFLPMTYQTYAKAFTMPAITWLWVMGLS 237
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ F ++ + + + + P IV S+ +L Q ++ ++ ++++A
Sbjct: 238 LVGTVIPFFLYMSALHKLPATKASVFTVFEPFTAIVLSIVLLHQSLNGMQYSGMILILLA 297
Query: 297 MVVYLLPTVINSGKN 311
++ + + +
Sbjct: 298 TLLNSIKLPMQRHRQ 312
>gi|228477171|ref|ZP_04061809.1| permease of the drug/metabolite transporter [Streptococcus
salivarius SK126]
gi|228251190|gb|EEK10361.1| permease of the drug/metabolite transporter [Streptococcus
salivarius SK126]
Length = 305
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 104/302 (34%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G+L V A I WG++ + Q+L V+V + S R++ + + A V+F
Sbjct: 2 SKQLKGSLMVITAGIAWGVSGVSGQYLMAHGVNVNLLTSLRLILAG-TLLTASVFFRQRD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + V + +F+ L ++ ++ A+ + +VTPV+ +
Sbjct: 61 KLAQAIKDRKTLVSIALFALFGLVLNQYAYLSAIQYTNAGTATVLQYVTPVLILAFVCAK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ +++A ++ I I+ H L + + +
Sbjct: 121 NRRFPTVSELVAIIMAIAGTFIIATHGQVTELAITPIGLFWGLFSALTYALYILLPAKAI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G I + + + + L + F + +F G
Sbjct: 181 EKWGSLIVIGLGMLLGGLIFPIAIQAWKYELPLTGGNLLALFGLVFIGTVFAYTVFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ ++ +V I+ + + ++V+A+++ L ++ K
Sbjct: 241 TMVGAVKGSLLASVEPVASVILTVLIMGDHFFAIDVLGMILIVLAVILISLKDLVALKKQ 300
Query: 312 KT 313
+
Sbjct: 301 EK 302
>gi|206895264|ref|YP_002246559.1| permease, drug/metabolite transporter (DMT) superfamily, putative
[Coprothermobacter proteolyticus DSM 5265]
gi|206737881|gb|ACI16959.1| permease, drug/metabolite transporter (DMT) superfamily, putative
[Coprothermobacter proteolyticus DSM 5265]
Length = 285
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 88/295 (29%), Gaps = 14/295 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ +G +++ WG T ++++ L + + R + + + I
Sbjct: 2 SRKSQDTLGYIYLIATTFFWGTTFVFSKEVLNYLDPFSYLFWRYVIAFIPLIPFIRIRKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + A+ AL T +F ++ ++ L
Sbjct: 62 D-------------MLDGFWLSITNAIALITQFVALTTINASTAAFIVSLSIPLTPLLEM 108
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++LK+R + + ++ ++ L ++ G A A V
Sbjct: 109 LWLKKRQSSTVTLGQIVSVVGFLALSYVPGEKFSVSIGAFLMLISALAYTVQFVLIPTLH 168
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + F + + L + + + G K
Sbjct: 169 IENQLNTSAYMIGFTALWSLPFTRSFSIPRGVLSPLLYLALVATTLTIWLQLQGQKNVSA 228
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+T + P+ + + F + + + T I ++ ++ ++ S N
Sbjct: 229 TTAAYIFAFEPIFAYLFAHFTVGENLTTFGNIGALLIFLSALLVQYGEYRTSKAN 283
>gi|254360562|ref|ZP_04976711.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
PHL213]
gi|153091102|gb|EDN73107.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
PHL213]
Length = 299
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 119/295 (40%), Gaps = 6/295 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSL 80
+ G L A +L+G FL+ ++ + + R+L ++P +F A+ F
Sbjct: 2 LKGILLSLSASVLFGCMYYLAIFLKPLAGVSIFGIRMLVTIPFLFLALYLFKKQNEFWVF 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + P + +++ +A+I+ F++A + + S Y + P+I V G V K
Sbjct: 62 LQRLKQEPYLLLVILITASIVGGQMWLFLWAPNSGKAIEVSMGYLLMPIIMVAFGKVVYK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ + +A ++ + + L +G ++ T F + +
Sbjct: 122 ETLSLNKWLAIVVAFIGVASNILFTGKISIASLFVCTGYPIYFYLRRKF--GLSHLHSFV 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + ++ N+ F+ GL++ ++ + +G
Sbjct: 180 VEILYLLPVACYFISQTDMQYVETQNLNIYYFIALLGLISGTALISYTLASTILPFNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ Y PLLM+V S I + + ++ ++I++ +L + + + +K
Sbjct: 240 LLGYVEPLLMLVVSFLI-GERLANESYLLMICLLISISFLVLDGMFALRQQRKRK 293
>gi|28211519|ref|NP_782463.1| integral membrane protein [Clostridium tetani E88]
gi|28203960|gb|AAO36400.1| integral membrane protein [Clostridium tetani E88]
Length = 299
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 91/296 (30%), Gaps = 10/296 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQV---SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + I +G + + + R SLP + +++
Sbjct: 2 KTKGILLTMLSSITFGFAFTLGPMTYGAQGSNPVTLTFLRNFLSLPFLLVIMLFLKIDFK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K LK+ +G + + T L ++ F + ++ FVT +F
Sbjct: 62 ITKKQLKDLIILGFVGNAITTLMLNMAFAYIDVGIVTPIHFTYPIFVTLGCVIFFHEKLS 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+++ L I + + +T S L + ++ ++ F I G E
Sbjct: 122 KQKVLALIIAMSGIGCFFFAALTSASFGSSTLLGLFLSIASGVFYAFYIIFMDKSGLKSE 181
Query: 200 MCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ + L + I L + GIK
Sbjct: 182 PPFKITFYVAIASTIGMFLYGEVTNQLVLGSLTTKAWYISTIFAFLCTVVALSLLQVGIK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S ++ P+ ++ +L + I ++ + ++ ++ S
Sbjct: 242 HIGASEAAVISTFEPITSVIFGALLLGEQITLIKIVACILIFAGVLTLSFAKAEKS 297
>gi|251779153|ref|ZP_04822073.1| transporter [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083468|gb|EES49358.1| transporter [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 293
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 91/281 (32%), Gaps = 6/281 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N G +F+ + + + + + + L+ R L + I+
Sbjct: 4 NNLSNRSKGIIFIILSAFGFAMMSAFVKLSGDLPSLQKSFFRNLVASLIALSLIIKHKES 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K + +L Y + + ++P + ++
Sbjct: 64 FFGKRENQKILILRSLFGTLGIVL------NFYTIDKLVLSDANMLNKLSPFFVIIFSAL 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E++N QI++ ++ L L + S + A+A A A + G
Sbjct: 118 FLSEKINTKQIVSLIIAFLGALFIIKPSFNLEVISALAGVGGAIFAAAAYTCLRVLGGKE 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+ + F + + + +LI G+ S + K A
Sbjct: 178 KHYTVVFYFSTFSSIVLFPFMMMSYKSMTMMQLTYLILAGVFASVGQFGVTLAYKYAAAK 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ I +Y+ L + S+ I D + I + I+ A +
Sbjct: 238 EISIFDYSNILFSAIISLVIFGALPDCLSVIGYVIIFAASL 278
>gi|190891011|ref|YP_001977553.1| permease [Rhizobium etli CIAT 652]
gi|190696290|gb|ACE90375.1| putative permease protein [Rhizobium etli CIAT 652]
Length = 312
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 101/310 (32%), Gaps = 15/310 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
+ M G + +++ + + + +V R ++L + + Y
Sbjct: 1 MHSVLRNPMRGIALKVSSVVVFLAMQTFIKLAGPDIPPGQVTFCRSFFALFPIIAYLAYI 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + TI + F Y LL + P+++V
Sbjct: 61 GQLRAAF-----HTENPVGHLKRGTIGILSMAFGFYGLLHLPLPEAIALGYALPLVAVIF 115
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFAR 185
+VFL E + + A L+ + + I++ + V +SA
Sbjct: 116 AAVFLGETVRIYRWSAVLVGMAGVAIISWPKLTLFRDGGMETEQAVGALCVLFSAVLGGM 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I V ++ +L V++ S + + P +FLI G
Sbjct: 176 AMIQVRRLVEEEKTATIVLYFSLTASVFSLASLPFGWLVLPWPSAVFLIAAGFCGGVAQI 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A +ST+ EYT+ LL + F+ I IVV A + +
Sbjct: 236 LLTESYRHADVSTIAPFEYTSILLGGIVGYFVFGDVPSVTMLIGTVIVVSAGIFIIYREH 295
Query: 306 INSGKNKTKK 315
+ + +
Sbjct: 296 QLGIEQREAR 305
>gi|167648781|ref|YP_001686444.1| hypothetical protein Caul_4826 [Caulobacter sp. K31]
gi|167351211|gb|ABZ73946.1| protein of unknown function DUF6 transmembrane [Caulobacter sp.
K31]
Length = 307
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/296 (16%), Positives = 105/296 (35%), Gaps = 12/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G L++ + +L+ +FL +R L + + +
Sbjct: 15 TPNLRGALWMLASAVLFTAMTTLIKFLGPGYPAALQTFYRQLAGAIILLPLV-------A 67
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
G+L+F ++ + YA + F + V L +V L
Sbjct: 68 RDWRGALRTTRPGILIFRSSAGVLAMILGFYAYQELPLADANALSFTRTLWLVPLAAVVL 127
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG----IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+E + L++ AAL+ L +LIM L +A SA FA +
Sbjct: 128 REPIGPLRLGAALVGFLGVLIMLRPGSGGVAHGLGWPQMAALASALLFALTITGMKVMTR 187
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L A +V++ + ++PD L G+L + + G++ +
Sbjct: 188 DHSPFTLLVYAAGLGLVFSIPPALFVWRWPSLPDLGLLALMGVLGTLTQGCYIKGMEAGE 247
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + ++YT + +++ + + + I G+VV + + S ++
Sbjct: 248 AAVMAPIDYTRLVFAVIAGLLLFHEKPSPAVLIGAGVVVASTLFISWREHQVSQRH 303
>gi|291520778|emb|CBK79071.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Coprococcus catus GD/7]
Length = 289
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 84/290 (28%), Gaps = 8/290 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ + + + I L + + +E R L + F +
Sbjct: 6 KAIVCILISAFGFSIMNLCVKLSGDLPSIEKSFFRNLVAAIIAFILLY------RSKAGF 59
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + L+ A + + YAL S ++P ++ +FLKE+L+
Sbjct: 60 SCKKENLPALILRAVLGTIGIFCNFYALSHMVLSDASMLNKLSPFFTLIFSYIFLKEKLS 119
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q IA ++ + L + S + + A G E
Sbjct: 120 PFQCIAIVIAFIGSLFIIKPSFDLTATFPALCGFIGGVCAGGAYTCVRYLGIKGEKGPFI 179
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV--FCIFSYGIKRAKLSTVGIM 262
+ FF + FLI G + K A + I
Sbjct: 180 VFFFSAFSCLAALPYMIFFFEPMTLQQFLILIGAGAGAAVGQFGITAAYKYAPAREISIY 239
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+YT + + S + D + + + ++ + L ++ K
Sbjct: 240 DYTLVIFAAIWSFLFFGELPDWLSILGYVLIFGMSALMFLYNNRHAESAK 289
>gi|124023290|ref|YP_001017597.1| integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9303]
gi|123963576|gb|ABM78332.1| Integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9303]
Length = 304
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 91/292 (31%), Gaps = 15/292 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
+ + + G + A + + + + + L + V E++ R L SL
Sbjct: 7 NNQLQTNSQRRGFKSLLFAALAFSLMTVCVKHLGGRLPVAEILFARSLISLAI------- 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + +L+ + AL + + + P
Sbjct: 60 -TRFMLSRVGVSPWGHRKRLLLLRGLLGTAALFCVFDALASLPLATATVLQYTYPTFIAL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLL------IMTLHSGIPLLSLAIAVTWSAYCFARKT 187
+FL+ER++ IA LL L + + A A
Sbjct: 119 AAWIFLRERIHRRIGIAVLLGWLGITLVLKPEWLGTSFTGYSPLSVSIALSGALFTALAY 178
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ V ++ ++ L V G L D L+++G GL
Sbjct: 179 VCVRELSKQEHQLVIVFYFPLTSVPIALLFLGNQGVLPLGIDWLWILGIGLFTQLGQIWI 238
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ +T G + Y L + V + +P+D I +V+ A ++
Sbjct: 239 TEGLTLLPAATAGSIGYFQVLFATLWGVLLFAEPVDGWFVIGALMVLGATLI 290
Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%)
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
++A F+ T+ V G +L +L + F L+
Sbjct: 23 LFAALAFSLMTVCVKHLGGRLPVAEILFARSLISLAITRFMLSRVGVSPWGHRKRLLLLR 82
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
GLL + + L+T +++YT P + +++ L++ I I + +
Sbjct: 83 GLLGTAALFCVFDALASLPLATATVLQYTYPTFIALAAWIFLRERIHRRIGIAVLLGWLG 142
Query: 297 MVVYLLPTVI 306
+ + L P +
Sbjct: 143 ITLVLKPEWL 152
>gi|172064427|ref|YP_001812078.1| transporter DMT superfamily protein [Burkholderia ambifaria MC40-6]
gi|171996944|gb|ACB67862.1| RarD protein, DMT superfamily transporter [Burkholderia ambifaria
MC40-6]
Length = 299
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 50/294 (17%), Positives = 115/294 (39%), Gaps = 6/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G + A L+ + Y + L ++ L++ + R++W+ PG I +L+
Sbjct: 9 RGIVLSVLASTLFALMSAYAKLLAPLTGLDIFAWRIVWTAPGALALIALRGRWPALVELV 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++++ + + L SA +L + F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSVRDWRLLIALPVSAALLGLQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L + + + F + S F
Sbjct: 129 RLDPLQWAAVAFAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAVEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + + + + L G G+L++ + + ++ GI
Sbjct: 189 VLL---CPFALAMVSTSATPVAGHPLLWAALLPGLGVLSTLALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ Y P+L++ S+ +L + + + +G + +A+ + + + + ++
Sbjct: 246 LGYVEPVLLVAVSLLLLGETLSVAQLATYGPIWVAVALTAWHSAMLMRRLPARR 299
>gi|323698669|ref|ZP_08110581.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
ND132]
gi|323458601|gb|EGB14466.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans ND132]
Length = 297
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 84/289 (29%), Gaps = 12/289 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F A W + L+ + +S +E+ R +
Sbjct: 14 GYGFTVLAAFSWSLMTLFAKAMLAAGLSPMEISFWRAAIGGLFFIASAASLRALRIPPAR 73
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L + + ++ + ++ + + PV E +
Sbjct: 74 ALLFILWGMLSIAGLFLVFL------LSIQYSGAAMGEILLYTAPVWVAVFSRYISHEEV 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIP----LLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ + +A ++ + ++ + G + S C+A + + +
Sbjct: 128 SNRKWLAIVMALCGVIFICFSGGSIRGEVSPVGILCGLASGLCYALQYPFFKHWQKHYRT 187
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A + V+ H ++ ++ F + G+KR V
Sbjct: 188 ETIYAYMEMGGVLAMLPFVHFHTAYTPQTWSMVVLMAFFTGYLAFWAYGQGLKRLPQVHV 247
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ P+L V + + F ++++ +++ ++
Sbjct: 248 AVLCNLEPILGTVWACRFFDENFSPAGWAGFSLILLGVLILATERPRHA 296
>gi|47568918|ref|ZP_00239610.1| RarD protein [Bacillus cereus G9241]
gi|47554402|gb|EAL12761.1| RarD protein [Bacillus cereus G9241]
Length = 258
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 68/250 (27%), Positives = 131/250 (52%), Gaps = 4/250 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYF 74
+ S G ++ AY +WGI P+Y +++E+V E+++HR++W+ + + F
Sbjct: 3 SQSAEQKKGIIYAAGAYTMWGILPIYWKWVEEVPADEILAHRIVWAFVFMLIVLGVTKRF 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K PK + L ++ +++ +W +I+A+ S Y++ P+IS+ L
Sbjct: 63 RQFIGEFVNLFKRPKLLMSLTIASVLISGNWFVYIWAVNHNHVIEASLGYYINPLISILL 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+V LKE+LN Q +A L + ++I+T+ G IP +SL++A+++ Y +K + ++
Sbjct: 123 GTVVLKEKLNFWQYVAVGLAGVGVIILTVRFGAIPWVSLSLALSFGLYGLTKKLLNYDAT 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G +E ++ A+ Y+V G G F ++ TL LIG G++ + F+ G +
Sbjct: 183 IGLTMETMLVTPFAIIYLVMTGVHGFGSFGSISMLSTLLLIGAGIVTALPLFYFAKGAQL 242
Query: 254 AKLSTVGIME 263
L VG
Sbjct: 243 IPLYMVGFFT 252
>gi|327474554|gb|EGF19959.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis SK408]
Length = 352
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/293 (9%), Positives = 78/293 (26%), Gaps = 6/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ A + I+ +++ L V+ + + L + GV ++
Sbjct: 3 KQKTKTSAVILALLAAGFYAISTPFSKVLLNNVTPTFIAAFLYLGAGIGVGIMYLFHIKK 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + + F I + S V + + +
Sbjct: 63 EKKSERLTKQDLPYTIGMIGLD--IAAPIFLIIGIKMGTASNASLLGNFEIVATALMALL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSE 194
F KE+++ IA I LS ++++ + S+
Sbjct: 121 FFKEKVSRNLWIAIGFITLSSIVLSFEGSDSFQFSIGSFFVILATCCWGLENNCTRKMSD 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
E+ +L + ++ + ++ +
Sbjct: 181 KSTYEIVLLKGIFSGGGSFTIALLLGEKIPEMKYIAEVMLLGFVAYGLSIFLYIRAQRDL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ AP + + + + + I ++++ V + T++
Sbjct: 241 GAAKTSSFYAVAPFVGSFLAFAVNGEKLALEYFIGLALMLLGTVFVVYDTMVK 293
>gi|323497727|ref|ZP_08102742.1| putative permease [Vibrio sinaloensis DSM 21326]
gi|323317203|gb|EGA70199.1| putative permease [Vibrio sinaloensis DSM 21326]
Length = 290
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 93/287 (32%), Gaps = 12/287 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +L G ++++ ++ + I+ R L + + +S +
Sbjct: 11 LVVTTLLAGFGWIFSKEAIQGLPPFGFIALRFLLASLCLLPFCFGSLKSISFV------- 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ L + + ++ +F ++ +I + +E+
Sbjct: 64 QFRQALGGGLILALALLAWVYAVSISDTLGEGAFIVSLSMIIVPIVAWTLFREKPKRAFW 123
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEGFFIEMCVLA 204
A + + L ++L G + ++A F + S + L
Sbjct: 124 FAMPIAVAGLAFLSLKGGWQSSPGQLWFLFNACLLALHFNINSRLAQSLPILLLTCIQLF 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ L ++ + + N FL L S F + + G K + ++
Sbjct: 184 VTGLIALMVSSLVETMPEHIDNEIWGWFLASAILATSLRFAMQTLGQKGCNPANAALIML 243
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ ++ S+ + + T + + +++++++ Y + +
Sbjct: 244 LEPIWTVILSIIWYGEQLSTNKVVGCSLILLSLLFYRTDGRLFRIRR 290
>gi|260494302|ref|ZP_05814433.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_33]
gi|260198448|gb|EEW95964.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_33]
Length = 287
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 95/283 (33%), Gaps = 8/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + + ++L ++ E + R S + + + +
Sbjct: 4 SDKTKGVFWMLISVLGFTFMGIAVKYLPRIPTYEKVFFRNSVSFILSAYILYRQKESIKV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + V YAL + ++PV +FLK
Sbjct: 64 AKE------NIPFVFGRSFFGFVGMVANFYALENLTMAEANMLNKLSPVFVTICACIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q+I +L++++++ + S P + ++ +SA + G
Sbjct: 118 EKVDKKQVIGIILMLMAVVFVIKPSFSPEVIPSLVGLFSAILAGFSYTIIRYLHGKVKSE 177
Query: 201 CVLAIPAL-FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L + + ++G G+ + +Y A S V
Sbjct: 178 INVFYFSLLSVICTFPLMMMNFVKPNLFEVFMLIVGIGVSAAMGQFGLTYAYTFAPASEV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYL 301
I Y + + + D I I++ A+ +YL
Sbjct: 238 SIYNYVIIITSMFMDYILFSTIPDLFSFIGGFIIITTAIYLYL 280
>gi|229009895|ref|ZP_04167114.1| Transporter, EamA [Bacillus mycoides DSM 2048]
gi|228751326|gb|EEM01133.1| Transporter, EamA [Bacillus mycoides DSM 2048]
Length = 330
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKALGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K ++ + + F + G + + + L
Sbjct: 88 MKFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 143 LYKNDALNRRKVIGVAIGFCGVILVNVPSDGSLSFHFGIGSLLLLGAAMMYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + F G F N+ L L+ L++ FCI++
Sbjct: 203 GSKTLDIGYMTAYQMIFGSIGLLCIGAFQVGMMPFTFNLHAILMLLYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSLILGEAIHSFVLFGLACVAAGIIVVNRNPVKKK 322
>gi|331003456|ref|ZP_08326955.1| hypothetical protein HMPREF0491_01817 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412502|gb|EGG91891.1| hypothetical protein HMPREF0491_01817 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 287
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 94/279 (33%), Gaps = 6/279 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L++ A + + L+ + ++ E + R L + FF ++ +
Sbjct: 5 NKKIGILYILGAAFGFSLMGLFVRMAGELPTFEKVFFRNLIAAFVAFFMLIKNGYNWENI 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K +L +T + YA+ S ++P ++ + + L+E
Sbjct: 65 -----GRKNWILLFIRSTCGFIGVICNFYAIDHMNIADASILNKLSPFFAILISFIILQE 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI-EM 200
+ + I+ ++ + + + S +A+ V G + M
Sbjct: 120 KPVMMDILTTVVAFIGAIFVVKPSANFAFVVAMIGVMGGLMAGIAYALVRKMTGNGVKGM 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ ++F + F + + + L+G G + A +
Sbjct: 180 FIVFSFSVFSSICCVPLMAIDFIIPSPIQFIMLMGSGCSAMVGQICITKAYTYAPAKEIS 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +YT + + + Q D + I + I++ V+
Sbjct: 240 VYDYTQVIYSALLGFIFVGQIPDRLSFIGYTIIISMAVL 278
>gi|311105305|ref|YP_003978158.1| triose-phosphate transporter family protein [Achromobacter
xylosoxidans A8]
gi|310759994|gb|ADP15443.1| triose-phosphate Transporter family protein [Achromobacter
xylosoxidans A8]
Length = 325
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/308 (10%), Positives = 90/308 (29%), Gaps = 12/308 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF-SGG 77
G +L+ + +F + + +I+ R+L+++P +
Sbjct: 14 SSRAAGFFLATLGAVLFSAKAIVVKFTYRYGIDAVTLIAFRMLFAMPFFAAVAWHQSRRA 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
T+ + + V + L L F++P + V L +
Sbjct: 74 ARGEIPTMTWKERAQVCVLGLLGYYLSSFLDFLGLRYITASLERLILFLSPSLVVLLSAF 133
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTI 188
+ K + Q +A +L ++++ H + A ++S Y +
Sbjct: 134 WFKRPVERRQWMAMVLSYAGVVLVFAHDLSFGGGEVLLGSLFVFGSAASYSVYLICSGEL 193
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ +L + + +I L +
Sbjct: 194 VKRLGATRLVAYAMLVSCVACIIQFFVVHPPAMLIQPAGVYGYSVIHATLNTVVPVFMLM 253
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + T ++ P+ ++ + + L++PI + +V+ + +
Sbjct: 254 WAVALIGAPTASLLGMIGPVSVLFLASWFLQEPITVWQMAGTALVLAGVFALMGGGAGRL 313
Query: 309 GKNKTKKS 316
+ ++
Sbjct: 314 ASARQGEA 321
>gi|118478055|ref|YP_895206.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|118417280|gb|ABK85699.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis str. Al Hakam]
Length = 303
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGSIQFNSGGLFILLAAVSESLFFVFQTAYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|319646694|ref|ZP_08000923.1| YdeD protein [Bacillus sp. BT1B_CT2]
gi|317391282|gb|EFV72080.1| YdeD protein [Bacillus sp. BT1B_CT2]
Length = 309
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 92/301 (30%), Gaps = 11/301 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE---VISHRVLWSLPGVFFAIVYFS 75
+ G L V LWG++ Q++ + +E ++S R+L S + + +
Sbjct: 1 MKSAHVKGVLMVLAGASLWGLSGSAAQYIFERGAVEAGSLVSVRLLASGVILLLYVSMKN 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + + K +LVFS + F ++ + ++ P +F
Sbjct: 61 GFQHVCQIWKKKTDICSILVFSIFGMLAVQYTFFASIEKGNAAAAAILQYLAPFFVLFYL 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKT 187
V + + LL + + ++ + ++ A+
Sbjct: 121 YVKKELPPKWKDAVLTLLALFGVFLLLTGGRPDSLYIPAEAAVWGILSGGALAFYTVFAG 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S + + + + +G L + F ++
Sbjct: 181 GLIQSFGALTVTGWGMLVGGAGISFLFPPFRFDLSHIGAGEAAAILFVVLCGTALAFALY 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + PL ++SS L P + + +V+I +++ L
Sbjct: 241 IGSLSYLSAKETSCLSCAEPLAAVLSSALWLGVPFNAFQGAGTVMVIITVIILSLSRERK 300
Query: 308 S 308
+
Sbjct: 301 A 301
>gi|332716868|ref|YP_004444334.1| hypothetical protein AGROH133_13011 [Agrobacterium sp. H13-3]
gi|325063553|gb|ADY67243.1| hypothetical protein AGROH133_13011 [Agrobacterium sp. H13-3]
Length = 295
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/284 (16%), Positives = 98/284 (34%), Gaps = 6/284 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L AY + + + L Q+SV E+ +L+S +F FS
Sbjct: 3 KGFLLGLFAYATFSLGDATIKSLGSQISVFEIGFFSILFSGIFIF-----FSKPREERWR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ A IYA T F++P+ L +V LKE +
Sbjct: 58 EFWRMSRPFAVHGRAISGLFAGILGIYAFTTIPLAEAYALIFLSPLFVTVLSAVVLKEDI 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A L I+ +L++ L +A A+ A + + S G ++
Sbjct: 118 GPWRWAAVLAGIVGVLLVVRPGFKALELGHVAAIGVAFLAAMTIVLLRSLAGKEKRTSIM 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ + +NG + F + N+ GL + + A S +
Sbjct: 178 GVLLVYGLTFNGIASIPEFVMPNLHQFAAFAFIGLCTATGQITLLVATRIAPASQIAPSH 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y+ L + + + D + + G++ + ++ ++ +
Sbjct: 238 YSQILWAVAIGMTFFHEYPDAIAVLGLGVIAASGLLTMIRERVR 281
>gi|316935815|ref|YP_004110797.1| hypothetical protein Rpdx1_4514 [Rhodopseudomonas palustris DX-1]
gi|315603529|gb|ADU46064.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris DX-1]
Length = 309
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 82/285 (28%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + + + R W++ + A + ++ K
Sbjct: 21 YLLLSLTSLFWAGNAIVGRAVAGHFPPVTLSFLR--WAVAFMIVAPFAWRHLIADWKVIR 78
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + ++ AL P+ + L+ RL
Sbjct: 79 RHLPLMVTVSIIG--ISTFNTLQYTALQYTTALNVLLLQSTAPLFVALWALIVLRARLTA 136
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + ++ ++++ LH I LL + T+ Y + P +
Sbjct: 137 TQALGIAASMIGVVVIILHGNIAELAAIELNLGDLLFIGALATFGLYTALTQKRPQMHAL 196
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F L + + L + + ++ G++
Sbjct: 197 SFLSFTFGCGALFLIPLQIWELTTRPLPAFDWSNVGALLYVAVFPSILAYLCYNRGVRLI 256
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ L + + + +V+ ++V
Sbjct: 257 GANRSAPFFHLIPVFGSAMAIVFLGEQPHLYHAVGYALVLTGVIV 301
>gi|225568014|ref|ZP_03777039.1| hypothetical protein CLOHYLEM_04087 [Clostridium hylemonae DSM
15053]
gi|225163188|gb|EEG75807.1| hypothetical protein CLOHYLEM_04087 [Clostridium hylemonae DSM
15053]
Length = 317
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 94/298 (31%), Gaps = 15/298 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ +FV A +LWG + T+++ + + + R+ + + ++
Sbjct: 20 KRLAPVFVLMASVLWGSMGIITRYVAAIGFNTRQTAAVRITSAAVVLILFLLITDRNKLK 79
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L ++ + + + + P + + +F K
Sbjct: 80 IDKKDLKWFLGT----GLGSLFINNLAYAATVQRASLSVAVVLLYTAPFFVMIMSVIFFK 135
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVG 191
E+L +I A L +++ SG + A+ +S Y K +
Sbjct: 136 EKLTVQKIAALFLSFAGCILVVGLSGANVGDNALVTLLIGLSAGFGYSLYSIFGKVLMGK 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ ++ S G + +IG + + + +S +
Sbjct: 196 YESLTVTVYTFILASIASLLIAQPLSMGRIIASNASKMPVTVIGSVITLALPYICYSTAL 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K + S I+ + + V + ++ +D + VV A+V+ L +
Sbjct: 256 KYIESSKASIIASFEVVAASLFGVVLYRETLDLFNLVGIICVVAALVILQLNPKKSQR 313
>gi|260431861|ref|ZP_05785832.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415689|gb|EEX08948.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 311
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/310 (11%), Positives = 96/310 (30%), Gaps = 12/310 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV 72
+++ S ++ A L+ + L +++ R +++P + ++
Sbjct: 1 MTQSLTSHRPVLAVTLKLSALFLFTAMSALVKALSADFPPGQMVFFRSFFAVPVIVVWLI 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + G L + + TP+ ++
Sbjct: 61 SRGELAQGFVVR-----KPMGHFWRGVLGTTAMGLTFTGLSLLPLPEVTAIGYATPIFTL 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARK 186
L ++ L ER+ ++I A + +L +LIM G A+ V +
Sbjct: 116 ILAALLLGERIRLIRIGAVAIGLLGVLIMIWPRLGSADLGTGATIGALCVLGATVARGFV 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
I + ++ ++ + + + + + + L LI GL+ +
Sbjct: 176 QIHIRQLVQVDHPAAIVFYFSMTATLLSVLTVFWGWTMPTLNQLLILITMGLIGGVAQIL 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + + S + +YT+ L I + + +V+ V +
Sbjct: 236 VTSSYRFGQASMLAPYDYTSMLFAIFIGYVWFDELPTLAILLGAALVIAGNAVVIWREHQ 295
Query: 307 NSGKNKTKKS 316
+ +S
Sbjct: 296 LGLERGKARS 305
>gi|254723348|ref|ZP_05185136.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
Length = 294
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 95/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYTIFFSLFFITPFMVWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVFITTFEK 293
>gi|254672727|emb|CBA06692.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 324
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 87/283 (30%), Gaps = 8/283 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+MG A +L ++++ L + +SV + + L + + +
Sbjct: 28 LMGIFLAVSAALLNATIGIFSKILMEQGLSVQHIAFLKTLTGFVFISILLCRTGFTRQIA 87
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLT-----RQGFLTSFSYFVTPVISVFLGS 136
+ K + +L+ A + T + V ++ L S
Sbjct: 88 DISRKKEAILPLLLKVAICAFFGIYTLFFFETTAYQYGNAANVVVVLMASAAVSALILDS 147
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ L ER+ ++ L +L + +++ G L L A+ S Y I G
Sbjct: 148 ILLDERICISSVVGVGLAVLGIAMISWTGEGSLGLILNAALAGSGYGCFSVLIKKFGLNG 207
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L ++ G E L L F + +
Sbjct: 208 GIYLTRILMFFGSIFLFIPSLEGIEDIHWQWSFIPPLLALSLLPTILGFYCTTKALDYLS 267
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ V + E PL V + L + + + +++ +V
Sbjct: 268 AAKVQVTELAEPLFAAVLAWLFLNEIPEGRFFVGAILIIAGIV 310
>gi|330883006|gb|EGH17155.1| hypothetical protein Pgy4_29610 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 303
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 87/305 (28%), Gaps = 9/305 (2%)
Query: 7 KKEYSKGLSKENAS----LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLW 62
K E +S + + G F+ A L+ +++L + ++
Sbjct: 2 KLEQGSAMSTASTPLSGVNQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYV 61
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+ I S GL +L+ +A+ L T L
Sbjct: 62 VHTLLMACIFMPSAGLRVLRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATA----- 116
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC 182
F+ P++ L L ER+ Q +A ++ + ++I+ G + SA C
Sbjct: 117 VNFLAPLLVTALSVPLLHERVTRGQWVAVVVGFIGVMIIIHPGGELFTPAILLPLSSALC 176
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
FA + F LF + + + + FL+ G
Sbjct: 177 FALYLLLTRLVSPFDSPTTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMS 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + A + + Y + + + I+ ++ +
Sbjct: 237 AHLLLTQAFRFAAPAMLAPFSYCQIVFAGLLGFVVFDHMPSPTAQAGIAIICLSGLAAAW 296
Query: 303 PTVIN 307
Sbjct: 297 QQRRK 301
>gi|300853594|ref|YP_003778578.1| hypothetical protein CLJU_c03940 [Clostridium ljungdahlii DSM
13528]
gi|300433709|gb|ADK13476.1| Hypothetical Membrane Spanning Protein [Clostridium ljungdahlii DSM
13528]
Length = 312
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 88/300 (29%), Gaps = 28/300 (9%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
MG +F+ A +++ + + ++ L++ R L +F + + K
Sbjct: 1 MGYVFIILAAVIFSTMEIVGKLAVGLNPLQLNFLRFLIGGLILFPPTI---KAMRNKKMK 57
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K L + + F A+ + + + PV +V +FLKE LN
Sbjct: 58 FKKDDLYYFLGTGFLCVVLSMSLFQLAITFTKASTVAIIFSTNPVFTVMFAYLFLKEDLN 117
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
II+ +L ++ ++ + G I ++ A VG L
Sbjct: 118 RGTIISIILSLVGIVCILNPFGTVSDVKGIVLSILAAVTFSLYSVVGKLRSEKYGSITLN 177
Query: 205 IPALFYVVWNGF-------------------------SGGEHFFLGNIPDTLFLIGYGLL 239
+ + + + ++
Sbjct: 178 CVSFLVGDIIMLVIILLSNLPVVSSIINPKGGLSFMSHIPIIYGISAANIIPVIFLGIVV 237
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + +T I+ + P L + ++ L + I I ++I
Sbjct: 238 TGLGYMFYFMAMDETSATTASIVFFIKPALAPIFALIALSEKIPMNTVIGICFILIGSYF 297
>gi|269968817|ref|ZP_06182803.1| hypothetical protein VMC_42330 [Vibrio alginolyticus 40B]
gi|269826567|gb|EEZ80915.1| hypothetical protein VMC_42330 [Vibrio alginolyticus 40B]
Length = 305
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/312 (12%), Positives = 98/312 (31%), Gaps = 17/312 (5%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVF 68
S +S ++ +G F+ + + + + + + V E+++ R L SL +
Sbjct: 2 SSKMSNSFNTM-IPIGVRFMVLSAFGFALMSATVKHVGNYGIPVFEIVAARALVSLIISY 60
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
F + K +L + + Y++ T + ++ P
Sbjct: 61 FDV--------KRKRISVWGYNKPLLFARGAVGTMALMCVYYSVTTLPLAEATIFQYIHP 112
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYC 182
V + L FLKER+ + L +L + IM + + A+
Sbjct: 113 VFTALLAVFFLKERIQPSTFLCIALCLLGIYIMVSPETGQGSDSALPMFSVMIAILGAFG 172
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + V ++ L + + G+ F + ++ T L+ G+
Sbjct: 173 SSIAYVIVRKLSQTEDSSVIIFYFPLVALPASLLLIGDDFVMPDLYLTFMLVLVGVFTQI 232
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ ++ + Y + ++ + + + G++V ++
Sbjct: 233 GQLGLTKAMQTQQAGKASAYSYIQIVFSVLLGIIFFGEVPIIWTYVGGGLIVTGALINAF 292
Query: 303 PTVINSGKNKTK 314
+ K
Sbjct: 293 GHHLRLPFIKRN 304
>gi|296135772|ref|YP_003643014.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
gi|295795894|gb|ADG30684.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
Length = 300
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 100/295 (33%), Gaps = 7/295 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ P + L + A ++W + + T+ L + L+++ R ++ GV +++ G
Sbjct: 3 AKPHVRAVLAMVGATLMWSVAGVITRHLHHQNGLDLVFWRSSFAALGVLAWLLWRQGPRG 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +D A +L SA V + F+ AL T + ++P+I+ LG + L
Sbjct: 63 LARDV---RHASPLLWLSAGFWGVMFTAFMVALTLTTVAQTLIAESLSPLIAALLGWLVL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEG 195
+ L +A L + + + + L + V + A G
Sbjct: 120 RHALPARTWLAIALALTGMGWIVWQNLHHLNGSTQLLGMLVALAVPFSAAANWVSLRRAG 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ M + + V + + + + +R
Sbjct: 180 AAVPMQATVMLGALFSVLAVAFPAWPVSVDLHDLLWLAFLGVFQLAVPGLLAVWAAQRLA 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ VG++ + I+ + + + G+++ A+V L +
Sbjct: 240 PAEVGLLGLLEIVFGILWAWIGAGEQPSFGTLMGGGLIMFALVGNELLGWRQIKR 294
>gi|227889362|ref|ZP_04007167.1| DMT superfamily drug/metabolite transporter [Lactobacillus
johnsonii ATCC 33200]
gi|227850164|gb|EEJ60250.1| DMT superfamily drug/metabolite transporter [Lactobacillus
johnsonii ATCC 33200]
Length = 304
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 97/305 (31%), Gaps = 16/305 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 3 KQSKGRLWTVLAALAAVMWGISGLFAESLFKVSSKITPIWLTQIRLIISGIVLLIIATVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ ++ + L F+ A+ + + F+ P +
Sbjct: 63 --HQKPFSVLKDKKNTIHIIAYGIFGLLPVQVFYFIAIEMANASIATILQFIGPFFVLTY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARK 186
+V ++ L L ++AA+L + + +++ H L ++ A
Sbjct: 121 LAVTHQQVLRKLDVLAAILAFIGVFLLSTHGNFNQLAITPLALFFGLLSALGEASYTLIP 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
V + + + + ++ + F I
Sbjct: 181 VKLVKRVSSLVVTGWGMLLAGIGLMLVYPQFPSIPN--TPRVWLDVSAIIIIGTIIPFQI 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ K STV +++ PL V SV + + + + +V+ +++
Sbjct: 239 MANALRYVKPSTVSLLDAFEPLSATVGSVLVFGLVMSGMDWLGTFLVIGSVLALNFTPKR 298
Query: 307 NSGKN 311
N K
Sbjct: 299 NIKKK 303
>gi|227824196|ref|YP_002828169.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227343198|gb|ACP27416.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 302
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/304 (11%), Positives = 84/304 (27%), Gaps = 12/304 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L++ A +L G T + ++ + + + R +LP I +
Sbjct: 2 SEKSRGYLYLSVAMVLVGSTVVASKVIAAGLPPFTATALRFAIALPLFLLLIRLTATPWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +L+ + + I L P++S + V L
Sbjct: 62 RL----ARRDWAIVLLQAGVGSVGYTTLLISGLKLTPAADAGVIIGTLPIVSAMIAIVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIPVGS 192
ER ++A L +L +
Sbjct: 118 GERPKRSVLLAVALAAAGVLAIVFRPDAGNRYSLAGSALILGAVVCEGLFILLNKRLRAE 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + + + F ++ G+
Sbjct: 178 IPPLALSCLMAGLGGTIAAPIALAELPWTETMTVRAVAAVVYYALVPTVGGFVLWYAGLA 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + + AP+ ++ +V +L +P+ + + G V+ A+ + + + +
Sbjct: 238 KVSGAEASVFTALAPVSAVLLAVAVLGEPLRLNQLLGIGCVLAAVTCLGVASRGRNALRR 297
Query: 313 TKKS 316
K+
Sbjct: 298 QAKA 301
>gi|313624977|gb|EFR94876.1| putative integral membrane protein DUF6 [Listeria innocua FSL
J1-023]
Length = 319
Score = 75.7 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 99/311 (31%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLIFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
VFL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 VFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + F ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFVFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MELIYERKKTK 307
>gi|312897646|ref|ZP_07757063.1| protein RarD [Megasphaera micronuciformis F0359]
gi|310621279|gb|EFQ04822.1| protein RarD [Megasphaera micronuciformis F0359]
Length = 256
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
L + + +L+ +A ++ +W +I+A+ TS Y+
Sbjct: 2 LFVLIFAGRKQLKEDLAFLREKTSRIFLLLTAAVLVTANWLTYIWAVTHGHVIDTSIGYY 61
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFA 184
+ P++SV LG V E+L+ + I+ +L + L +MT G P L+L +A T++ Y
Sbjct: 62 LNPLLSVLLGVVMFSEKLSTPKRISIVLAAIGLALMTWQGGHFPWLALLLAGTFALYGAV 121
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+K + + +E ++ P++ Y+ + HF ++ T L+G G++ +
Sbjct: 122 KKMLHLQPISSITLETLIVLAPSIIYIYNLHSNSSGHFLTSDVTTTFLLLGAGIVTAVPL 181
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+FSYG L+ +G ++Y +P L V +F +P T + I + I++V++ +
Sbjct: 182 LLFSYGANELPLNVLGFIQYISPTLAFVWGIFFFHEPFGTDKLIALSFIWISLVIFTIGE 241
Query: 305 VINSGKN 311
+ ++
Sbjct: 242 RLQISRS 248
>gi|229131408|ref|ZP_04260305.1| Transporter, EamA [Bacillus cereus BDRD-ST196]
gi|228652054|gb|EEL07994.1| Transporter, EamA [Bacillus cereus BDRD-ST196]
Length = 330
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKALGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K ++ + + F + G + + + L
Sbjct: 88 MKFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 143 LYKDDALNRRKIIGVAIGFCGVILVNVPSDGSLSFHFGIGSLLLLGAAMMYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + F G F N+ L LI L++ FCI++
Sbjct: 203 GSKTLDIGYMTAYQMIFGSIGLLCIGAFQVGMMPFTFNLHAILMLIYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSLILGEAIHSFVLFGLACVAAGIIVVNRNPVKKK 322
>gi|146342766|ref|YP_001207814.1| DMT family permease [Bradyrhizobium sp. ORS278]
gi|146195572|emb|CAL79599.1| Putative transport protein; putative permease of the
drug/metabolite transporter (DMT) superfamily
[Bradyrhizobium sp. ORS278]
Length = 309
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/284 (10%), Positives = 75/284 (26%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + W + + + + + R WSL + + +
Sbjct: 22 YVLLSITALCWAGNAIVGRLAAGHIPPVTLSFLR--WSLAFLIILPLAWKQLRQDWPAIR 79
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + + ++L Q T P+I + L+ L
Sbjct: 80 SKLGIMVALSVTG--IGAFNTLQYWSLEYTQALNTLLLQSGGPLIVALWSMLLLRVHLTF 137
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + +L ++ +L++ L+ L + Y P
Sbjct: 138 AQAVGIVLSMIGVLLILTRGHPAAIADISFNKGDLIFLLAMAVFGFYSVLTIKRPQIHGL 197
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+L ++ + L ++ + F+ G+
Sbjct: 198 SMVAFTFGCGAASLIPLLIWELNTRPVMAFDTQNLLSLLYVAIFPSTIAYLCFNRGVLLI 257
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + P+ + + L + I F +V+ +
Sbjct: 258 GANRAAPFFHVVPVFGSIMAFVFLGEQPQLFHVIGFALVLAGVY 301
>gi|229056248|ref|ZP_04195669.1| Transporter, EamA [Bacillus cereus AH603]
gi|228721053|gb|EEL72591.1| Transporter, EamA [Bacillus cereus AH603]
Length = 330
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKALGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K ++ + + F + G + + + L
Sbjct: 88 MKFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 143 LYKDDALNRRKVIGVAIGFCGVILVNVPSDGSLSFHFGIGSLLLLGAAMMYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + F G F N+ L LI L++ FCI++
Sbjct: 203 GSKTLDIGYMTAYQMIFGSIGLLCIGAFQVGMMPFTFNLHAILMLIYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSLILGEAIHSFVLFGLACVAAGIIVVNRKPVKKQ 322
>gi|226223121|ref|YP_002757228.1| hypothetical protein Lm4b_00518 [Listeria monocytogenes Clip81459]
gi|254853864|ref|ZP_05243212.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254992409|ref|ZP_05274599.1| hypothetical protein LmonocytoFSL_04549 [Listeria monocytogenes FSL
J2-064]
gi|300765146|ref|ZP_07075132.1| hypothetical protein LMHG_11931 [Listeria monocytogenes FSL N1-017]
gi|225875583|emb|CAS04286.1| Putative transmembrane protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258607249|gb|EEW19857.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300514117|gb|EFK41178.1| hypothetical protein LMHG_11931 [Listeria monocytogenes FSL N1-017]
Length = 319
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 100/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLIFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
VFL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 VFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + FG ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|297530502|ref|YP_003671777.1| hypothetical protein GC56T3_2229 [Geobacillus sp. C56-T3]
gi|297253754|gb|ADI27200.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
C56-T3]
Length = 292
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 82/293 (27%), Gaps = 14/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ +L + A +WG + +++ L+ + ++ R +L +
Sbjct: 2 KQPVLASLCLSLAASIWGGMYVVSKYVLDYIPPFTLVWLRYAVALIVLGAIAAMKRE--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ V S TP V L
Sbjct: 59 --RPPKNGRDWGMVIAIGIIGYVVSISLQFVGTKWSNAHTASLITASTPAFVVLFARWLL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR--------KTIPVG 191
E L ++ A LL ++++ G + A +
Sbjct: 117 GEALTWRKMAALLLATAGVIVIVGLGGSGESTFAGNMALVGAAITWALLSVLVKIASGRL 176
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S +A + +++ G L + + F +++ G+
Sbjct: 177 SVLSVTTYAIFVAFIGMTPMMFAEGPGLAASHWSVPVALGVLYLGVVSTAGAFFLWNKGM 236
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + PL+ + +L + + + ++V +VV +
Sbjct: 237 EMIDAGVGSLFFFFQPLVGSLFGWLLLHEELTASFWLGGALIVAGVVVAVRSG 289
>gi|295093256|emb|CBK82347.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Coprococcus sp. ART55/1]
Length = 315
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/306 (11%), Positives = 99/306 (32%), Gaps = 12/306 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFA 70
+S++ + G + V I+WGI+ + Q++ V+ ++ R S +
Sbjct: 1 MSEKQINHSQRFGIILVLSCGIMWGISGVLGQYVFQSSDVNATQLSIIRQFISGVVLLVI 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
G L K + ML F+ + + + ++ + F ++
Sbjct: 61 A-AVKGDKRALTIWSKPKSVISMLFFALSGVMGVQFTYFASIEHSNAATGTVIQFTYIIM 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCF 183
+ ++F+ +R + + + + + ++ H P L + +
Sbjct: 120 LLLYTTIFMHKRPHIYEAASVVCAFAGIFLIATHGSLNSLAIFRPTLIWGLTSAVCFTIY 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + G + ++ A ++ + + L + +
Sbjct: 180 CLYPQKLYNEYGLVNIIGWSSLIASIFLALVTKTFSLPH-MDGRIIAASLAVAIVGSLIP 238
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F I+ GI + P+ + + L ++ I F +++ ++ V +
Sbjct: 239 FTIYGLGISILGSVKASLFVTVEPVSSALLTWIFLGTQFTSMDLIGFLLILGSIQVVAIM 298
Query: 304 TVINSG 309
T +
Sbjct: 299 TFHSEK 304
>gi|297828730|ref|XP_002882247.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328087|gb|EFH58506.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
Length = 424
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 86/283 (30%), Gaps = 12/283 (4%)
Query: 34 YILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG + + + + V + R++ + + VY + L + +
Sbjct: 139 FFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKARPLPKGINAWLSIALFA 198
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
++ + + G + + S V + S G R L + A
Sbjct: 199 LVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAG 258
Query: 153 LIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
L++L + +T G + +A A S+ + I
Sbjct: 259 LLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIG 318
Query: 207 ALFYV-----VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + G L L ++ + ++ Y + L+ +
Sbjct: 319 GLPLLAISVINHDPVFNGSLQELSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSS 378
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + P+ + L + +++ + + ++A+ + P
Sbjct: 379 LTFLTPMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNFPE 421
>gi|291298630|ref|YP_003509908.1| hypothetical protein Snas_1105 [Stackebrandtia nassauensis DSM
44728]
gi|290567850|gb|ADD40815.1| protein of unknown function DUF6 transmembrane [Stackebrandtia
nassauensis DSM 44728]
Length = 334
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 68/277 (24%), Gaps = 5/277 (1%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+LWG T L+ + L ++ +V R L + L + T
Sbjct: 14 ALLWGSTYLWIKLALTGLTPTQVTFARCLLGAAVLVVLCAAGRQRLPRDRGTWLRILVAA 73
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA-- 150
+ G + + V ++
Sbjct: 74 FFCNALPYALFSIGQQTVDSGVAGVLNATTPLWTLVVGIAIGAERRPHPVRVGGLLLGFA 133
Query: 151 --ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L+ G + A ++ + + + + L +
Sbjct: 134 GVLLIFAPWHEAGLTGWGALAILGAAVSYALSFTYMGRKLVGKGHATISLSASQLIVATG 193
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F G + + + L +F F + I + + Y P+
Sbjct: 194 LTAAALPFGGPVAMPVAPVVLVAVVALGVLCTAFTFHLTYRLIADEGATNAATVGYLLPV 253
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ L +P+ +V++ + +
Sbjct: 254 VSVLLGAVFLGEPLSLRIIAGMAVVLLGVGMSRWRRR 290
>gi|258510232|ref|YP_003183666.1| hypothetical protein Aaci_0214 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257476958|gb|ACV57277.1| protein of unknown function DUF6 transmembrane [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 311
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/304 (11%), Positives = 89/304 (29%), Gaps = 15/304 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ +G + + A LWG T + ++ + V +I R + + A + +
Sbjct: 4 SWVGAVCLALAASLWGGTYVVSKAVMDWVDPSALIWLRYALGVVALAVAGLVRRVKWRIA 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
V + A+ + + TP V + L E
Sbjct: 64 A-----RHLVTVAAIGLVGYALSIWAQFVGTQWSTAQMGAVITSGTPAFMVIFARLLLGE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK---------TIPVGS 192
+ + + +L L +++M +A S
Sbjct: 119 AITWRRAASVMLATLGVIVMIGVGHQANSRVAWGGLILLVAAVTWGLQSVLVKRVPSEYS 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S ++A+ + + W L L + F +++ G++
Sbjct: 179 SIVVTAYAMLVALAVMTPLGWPHMPSLRTILGHTWVWMGSLYLGVLSTAGAFLLWNEGLR 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R + + + PL+ +L + + + +++ + + + ++ +
Sbjct: 239 RMPAGSGAVYFFLQPLVGTALGWLVLGETVSASFWLGALLILGGVALVVREPGPSATSRR 298
Query: 313 TKKS 316
+S
Sbjct: 299 WARS 302
>gi|169334749|ref|ZP_02861942.1| hypothetical protein ANASTE_01155 [Anaerofustis stercorihominis DSM
17244]
gi|169257487|gb|EDS71453.1| hypothetical protein ANASTE_01155 [Anaerofustis stercorihominis DSM
17244]
Length = 298
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/297 (10%), Positives = 98/297 (32%), Gaps = 21/297 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G + ++G++ L+T+ + + ++V+S R + + G+ +++
Sbjct: 1 MNKKFTIGIICAAVCETIFGLSYLFTKNITLSFTPIDVLSWRFIIAFIGINLCLLF---- 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++K K+ +L+ + +++ + + + P++++ ++
Sbjct: 57 -KVIKVDFKDKSLKPILMTALFCPVIYFTSETFGIELTTASESGTIIASIPIVTILCSAL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY---------------C 182
LKE+ N QI+ L + ++I + G+ + +
Sbjct: 116 ILKEKPNKNQIVGISLTFIGVVITVIVKGLSASFDILGYSMLFMAVLSYSLYSVYCKKSD 175
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + F+ L +
Sbjct: 176 NFTNIEKTYIMISMGFVFFGALGMGDNLIKGTFYDFIVLPFVNREFLITALYLGLGASII 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F + + I + + ++ I+S + IL + ++ + +V++ + V
Sbjct: 236 AFLLSNTAIGYLGTNKTASFVGLSTVVSILSGIVILSESFTILQLVGSILVLLGVYV 292
Score = 41.4 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 36/101 (35%)
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
I A + + L+ F ++GI+ S G
Sbjct: 41 WRFIIAFIGINLCLLFKVIKVDFKDKSLKPILMTALFCPVIYFTSETFGIELTTASESGT 100
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + P++ I+ S ILK+ + + + + I +V+ ++
Sbjct: 101 IIASIPIVTILCSALILKEKPNKNQIVGISLTFIGVVITVI 141
>gi|78061750|ref|YP_371658.1| hypothetical protein Bcep18194_B0900 [Burkholderia sp. 383]
gi|77969635|gb|ABB11014.1| protein of unknown function DUF6, transmembrane [Burkholderia sp.
383]
Length = 325
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 90/290 (31%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P +F +
Sbjct: 5 KTRLLGYLYLAAAMAGVGSTVIASRLAAGGLPPFAATALRFLIATPLLFALMRAQRMRWP 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ AV +++ +A + I P +S + +V L
Sbjct: 65 RI----STRDAVLLVIQAAAGGVGYTVLLICGTKLSSPLDAGVMLGTLPAMSTLIAAVVL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
+ER +AA L +L +T G L SL AV A
Sbjct: 121 RERQTSRDWVAAALATAGVLFVTFAPGHALPSLRTLAGDALVLAAVACEAVFILLNRRLA 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEH-FFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + +V F + + + + +
Sbjct: 181 APWPPLALSTAMSGLGFVLALVPAAFEWHAVATGWTVGAVSAIVYYALVPTVLGYLCWYA 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + ++ R +VV MVV
Sbjct: 241 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLNGTRIAGIALVVAGMVV 290
>gi|27467429|ref|NP_764066.1| hypothetical protein SE0511 [Staphylococcus epidermidis ATCC 12228]
gi|57866329|ref|YP_187988.1| hypothetical protein SERP0395 [Staphylococcus epidermidis RP62A]
gi|251810162|ref|ZP_04824635.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875690|ref|ZP_06284561.1| putative membrane protein [Staphylococcus epidermidis SK135]
gi|293368190|ref|ZP_06614819.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis M23864:W2(grey)]
gi|27314972|gb|AAO04108.1|AE016745_207 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57636987|gb|AAW53775.1| membrane protein, putative [Staphylococcus epidermidis RP62A]
gi|251806214|gb|EES58871.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295717|gb|EFA88240.1| putative membrane protein [Staphylococcus epidermidis SK135]
gi|291317613|gb|EFE58030.1| DMT superfamily drug/metabolite transporter [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329736772|gb|EGG73037.1| putative membrane protein [Staphylococcus epidermidis VCU028]
gi|329737962|gb|EGG74186.1| putative membrane protein [Staphylococcus epidermidis VCU045]
Length = 291
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 97/287 (33%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + + + + + ++ + + V + R ++ F I +
Sbjct: 4 NSKVKGIIAILISAVGFSFMSVFFRLAGDLPVFQKSLARNFVAMFIPLFFIYKYRQ---- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +L+ +T+ + IYA+ + P ++ L +FL
Sbjct: 60 --PMFGKLSSQPLLISRSTLGLIGVLLNIYAIDHMVLSDADTLMKLNPFWTIVLSLIFLH 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI A ++ I+ +L++ + +IA S A V +
Sbjct: 118 EKVRKYQITAMIIAIIGMLLIVKPEFSSSVIPSIAGLLSGIFAASAYTCVRALSTREKPY 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +LF VV + LFL+G GL + + A +
Sbjct: 178 TIVFYFSLFSVVVLIPFSIFTYTPMTTIQILFLLGAGLSAAVGQIGITLAYSFAPAKDIS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I Y + + + + + D T+ + +++ A Y+
Sbjct: 238 IFTYASIIFTALFGFILFGESPDMFATVGYIVIIGASY-YMFDKARR 283
>gi|317473651|ref|ZP_07932940.1| integral membrane protein DUF6 [Anaerostipes sp. 3_2_56FAA]
gi|316898941|gb|EFV20966.1| integral membrane protein DUF6 [Anaerostipes sp. 3_2_56FAA]
Length = 284
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 88/274 (32%), Gaps = 10/274 (3%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
F A +L+G + ++ ++ E++ R L + ++ + K
Sbjct: 9 FTALLLFGSNGIVASYIL-LNSYEIVFLRTLIGSLFLIAVFLFSGRKPQGFH----DKKH 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ + S + + W A T + + +Y+ PVI + + + +ER+ ++
Sbjct: 64 ILYITISGIAMGISWMLLYEAYKTVGVSIATLAYYCGPVIVMAVSPMVFQERMTLKKLSG 123
Query: 151 ALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+I + ++ + I S G L I
Sbjct: 124 FAAVIAGMYLVNKNGLFKTHVSAGLIFGILSAAMYALMVIFNKKAKSITGLENSAFQLII 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L V+ + L + + I R +V + Y
Sbjct: 184 SFLTVAVFMQTRQRLYISSVFHNLFPVLFLGIVNTGIGCYFYFSSIGRLPAGSVAVCGYL 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
PL ++ S F L++ + V+ + +++ VV
Sbjct: 244 EPLSALIFSAFFLRERLSAVQLLGAVLILGGAVV 277
Score = 36.8 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 42/117 (35%)
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I I +LF + FSG + + L++ G+ + + K
Sbjct: 27 LNSYEIVFLRTLIGSLFLIAVFLFSGRKPQGFHDKKHILYITISGIAMGISWMLLYEAYK 86
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+S + Y P++++ S + ++ + + F V+ M + + +
Sbjct: 87 TVGVSIATLAYYCGPVIVMAVSPMVFQERMTLKKLSGFAAVIAGMYLVNKNGLFKTH 143
>gi|322412604|gb|EFY03512.1| membrane protein [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 313
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 108/301 (35%), Gaps = 10/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ G+L V A + WGI+ + Q+L V + S R++ S + +++
Sbjct: 2 SKTVKGSLMVLLAGLAWGISGAFGQYLMAHGTDVHLLTSLRLMISGVVLTALVLWRHKE- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +L++S L ++ ++ A+ + +++P++ + S
Sbjct: 61 KVIALVTTKKHFKELLIYSLLGLGLNQYAYLMAIRYSNAGTATVLQYLSPILVLIFVSAT 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K + +A LL IL +IM H L + + K + +
Sbjct: 121 AKRLPTITESLAILLAILGTVIMACHGDLSHLAISPIGLFWGVFSALTYAYCVIKPVNMI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G I + + + + L + G+ F + F G
Sbjct: 181 KTWGSLIVIGLAMLMGGVVFPIVTRAWRYPLMLTADNLIALIGIIGIGTIFAYTFFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + ++ ++K+ + + ++++A+++ ++ +
Sbjct: 241 SLIGPVKATLLASIEPVASVFFAIVLMKELFYVIDLLGMALILVAVLLISFRDLLLYQRE 300
Query: 312 K 312
+
Sbjct: 301 R 301
>gi|309781454|ref|ZP_07676190.1| membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308919867|gb|EFP65528.1| membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 310
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/284 (9%), Positives = 80/284 (28%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + LWG + L+ + + +I+ RV + + + G +L
Sbjct: 6 VLELLTLAALWGGSFLFMRVAAPPFGPVALIALRVAIASCFLVPTLALRGGMGALRTHWP 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + LT TS P+ + + +L ER++
Sbjct: 66 HLLAVGVLNSAIPFCLFAYAE------LTLTAGFTSVLNAAAPLFAAIVAFTWLGERMSS 119
Query: 146 LQIIAALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+++ + + ++++ G+ + + A + +
Sbjct: 120 LRVLGLAIGFVGVIVLVGGSSVIDAKQGGVAVAAALSATVLYGVASSYTKRFLTGVPPLA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + +F + +
Sbjct: 180 VATGSQVAATIVLAPLAYWLWP-AQTPTGGVWLHVIALGIACTGVAYILFFRLVAHVGPT 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + P+ ++ + L + + I ++++ +
Sbjct: 239 RAVSVTFLIPVFGVLWGILFLGEQLTLNMVIGCAVILLGTSLST 282
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 33/85 (38%)
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
L L ++ FC+F+Y ++ APL + + L + + ++R
Sbjct: 62 THWPHLLAVGVLNSAIPFCLFAYAELTLTAGFTSVLNAAAPLFAAIVAFTWLGERMSSLR 121
Query: 287 TIVFGIVVIAMVVYLLPTVINSGKN 311
+ I + ++V + + + K
Sbjct: 122 VLGLAIGFVGVIVLVGGSSVIDAKQ 146
>gi|311114852|ref|YP_003986073.1| hypothetical protein HMPREF0421_20968 [Gardnerella vaginalis ATCC
14019]
gi|310946346|gb|ADP39050.1| protein of hypothetical function DUF6 [Gardnerella vaginalis ATCC
14019]
Length = 339
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/318 (11%), Positives = 92/318 (28%), Gaps = 5/318 (1%)
Query: 3 KGATKKEYSKGLS-KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRV 60
+G+ E + + ++N + + + +WG + + +++ LE ++ R+
Sbjct: 5 EGSDMSEINSAVQPRQNNRINVNFARIMLLLCAAIWGGSYVSSKYALEVFPPQWLMGVRM 64
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
L + + K + + S +
Sbjct: 65 LGACIIMGAVFFKTIRKNFTKKLIIPSLLTGVTYYASLVTQTEGLRWIDPGRSAFLTAAY 124
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA 180
+ + + L ++ L+ L + L + I A
Sbjct: 125 CVIAPFSAWMIIRKKPTLLGIIAALTCVVGVGLVALKPGSLVLTLSHGDVLTLICAAVFA 184
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL---GNIPDTLFLIGYG 237
+ + ++ + ++ S F I T
Sbjct: 185 FNLTYLAYYSRQYNPVALTFGQFSVSGVLFLCGAAISEPLPNFNAEDNWITITNMFYLIV 244
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++ I +Y + + ++ T L ++ S + + + +V I F ++ A+
Sbjct: 245 IVTVLAQIIQNYTLIYLSTANASVIMCTECLFTLLFSSILYNERVTSVAFIGFALIFAAI 304
Query: 298 VVYLLPTVINSGKNKTKK 315
++ L I K K K+
Sbjct: 305 LLASLAEHIELIKIKNKQ 322
>gi|170743036|ref|YP_001771691.1| transporter DMT superfamily protein [Methylobacterium sp. 4-46]
gi|168197310|gb|ACA19257.1| RarD protein, DMT superfamily transporter [Methylobacterium sp.
4-46]
Length = 295
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 5/286 (1%)
Query: 25 MGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG ++ AY+ WG+ PL+ + L + +++HR+LWS V +V G +
Sbjct: 1 MGLVYALGAYLCWGLLVPLHFRLLGSLPPWTILAHRILWSSLFVLLLLVVLRGRRAPFVP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ +L SA ++AV+W +++A+ S YF+ P+++V LG+ L ERL
Sbjct: 61 ARRH----ALLAVSALLIAVNWSLYLWAVQNGHMVEASLGYFINPLVAVALGAAVLGERL 116
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
LQ A L + +G T A + + F VL
Sbjct: 117 RPLQAWAVGLAAAGVAAAVALAGTLPWLALALATSFALYALIRKLVPIDPILGFGAETVL 176
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+PA + + L+ G+ S F+ +R KL+T+G+M+
Sbjct: 177 LLPAALAYLAGAAPESAALPALDGRTAGLLLLTGITTSLPLIWFAAAARRLKLATLGLMQ 236
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y +P ++ SV + + +D R VFG IA+ +Y V S
Sbjct: 237 YLSPTCTLLLSVTVFGESLDPARAAVFGFTWIALALYAADAVRLSR 282
>gi|169823992|ref|YP_001691603.1| putative integral membrane protein [Finegoldia magna ATCC 29328]
gi|167830797|dbj|BAG07713.1| putative integral membrane protein [Finegoldia magna ATCC 29328]
Length = 296
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 104/294 (35%), Gaps = 4/294 (1%)
Query: 27 TLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+F + +++G TP+ + +V+ R + +P + ++ + L + K
Sbjct: 1 MMFAIISALIFGFTPIMVRETLSNGSNVIMTSFLRGFFVIPFLAISLKSRNISLKVTKQE 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
LK + + T+ ++ + ++ F VT +FL K +
Sbjct: 61 LKKLILMCSIGGCITMTMLYASYQYISVGLATSIHFIFPTIVTVYSVMFLNEKMTKYKFV 120
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP--VGSSEGFFIEMCV 202
L +I+L+ + ++ + LA+A + + + + + +
Sbjct: 121 SLIASIIGVILLANNVGGSNNFPLGMFLAVASGCTYSFYLIYMDVSGLKNMDSVKVTFYN 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
I + ++ +G L + + L++ F I A +ST I
Sbjct: 181 CTINSTMLFIFGLITGDFTLSLSRYAWIIAFVISILVSVFGTLFIQLSIVNAGVSTYTIF 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P+ ++ + + + D R + ++ +++++ + K + +
Sbjct: 241 STLEPITSVILGIILFNETTDPRRLLGCFMIFLSVMILAVSMRFQERKAREAIN 294
>gi|254829412|ref|ZP_05234099.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|255027201|ref|ZP_05299187.1| hypothetical protein LmonocytFSL_14248 [Listeria monocytogenes FSL
J2-003]
gi|258601826|gb|EEW15151.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
Length = 319
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 100/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLILLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
+FL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 IFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVTVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + FG ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|323483025|ref|ZP_08088419.1| hypothetical protein HMPREF9474_00168 [Clostridium symbiosum
WAL-14163]
gi|323403654|gb|EGA95958.1| hypothetical protein HMPREF9474_00168 [Clostridium symbiosum
WAL-14163]
Length = 300
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 102/296 (34%), Gaps = 9/296 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +LWG+ P +T+ L +S + + + + + + L
Sbjct: 5 YILAGGTIMLWGMMPPFTKLLLSGLSNAKTVFISSMIAFIFMAVLNLACGNLKRFL--QY 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V M+ ++ + Y L ++ PV++V ++L ER
Sbjct: 63 RPKDYVKMIALGFMGKFLYSVLYFYGLSGLAAGDACIINYLWPVMTVVFSCLWLGERFTW 122
Query: 146 LQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ +A ++++ + L + V + A + + F+
Sbjct: 123 RKSMAIFASFSGVVLVASKGSMEGLLSGNLRGIVSCVAAAVCYGAFNVLNKKENRDQFVS 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M V A + + GE L + +++ F +++ ++ + +
Sbjct: 183 MTVYFFSAALFSGIWFLAEGESIALTGAQTAGIIWLGVFMDAAAFLMWALALQNGDTAKL 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y P + ++ S +L +P+D I +++ + V + + + K K+
Sbjct: 243 SNFAYITPFMAVLYSALLLNEPVDRYSVIGLLLIMGGIFVQMGGSERGASLFKRKR 298
>gi|84495556|ref|ZP_00994675.1| hypothetical protein JNB_12159 [Janibacter sp. HTCC2649]
gi|84385049|gb|EAQ00929.1| hypothetical protein JNB_12159 [Janibacter sp. HTCC2649]
Length = 318
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/289 (11%), Positives = 83/289 (28%), Gaps = 14/289 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +LW + + L V + R+L + + F +
Sbjct: 32 LVAMAVTLVLWASAFVAIRHLGKDVPAGALSLGRLLVASIALSFLVFRRRPTWP------ 85
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K +++ ++ A + + P+I L +VFL ER+
Sbjct: 86 KGRDWWLLVLCGVGWFGIYNLALNEAERRIDAGTAALIVQIGPLIVALLATVFLGERMTK 145
Query: 146 LQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ ++ + I+ +A A + +G G +
Sbjct: 146 WLLAGMVVGFAGVAIIARGFSGEGSGDTVGVWLTVLAAVTYAIGVLAQKPLLGRMPGPEV 205
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
I + + W G + F ++Y + R
Sbjct: 206 TWIACVIGTVVCLPWAGDLVDVVKVADAGTLWWIAYLGIFPTAIAFTTWAYVLSRGDAGK 265
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V + + P + + + +L + + + G+ ++ +++ +
Sbjct: 266 VTLTTFLVPFIATLIAWALLSEVPPALTFVGGGLAIVGVLLTRVSRAAR 314
>gi|229151559|ref|ZP_04279762.1| Transporter, drug/metabolite exporter [Bacillus cereus m1550]
gi|228632102|gb|EEK88728.1| Transporter, drug/metabolite exporter [Bacillus cereus m1550]
Length = 294
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFATLIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELIDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|149915309|ref|ZP_01903836.1| hypothetical protein RAZWK3B_04822 [Roseobacter sp. AzwK-3b]
gi|149810598|gb|EDM70439.1| hypothetical protein RAZWK3B_04822 [Roseobacter sp. AzwK-3b]
Length = 300
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 91/293 (31%), Gaps = 8/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ G ++ + + L + E R L L + +
Sbjct: 4 SAARPGWGIFWMIVTGGCFVTVTALVKLLGTRIPAPEAAFLRYLLGLVFLIPVL------ 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + + + + + +A+ + ++ P+ ++
Sbjct: 58 -GQLRRIKLDRMEWTLFAGRGVVHTIAVALWFFAMARIPIADVTAMNYLAPIYVTLGAAL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E+L +++A + +L LI+ + +A+ ++A F +
Sbjct: 117 FLGEKLALRRVMAVGVALLGALIILRPGLREVGPGHLAMLFTAVFFGASYLIAKRMTATA 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+A+ ++ + + + L+G + + + A L+
Sbjct: 177 SPGIVVAMLSITVTIGLAPLAAMQWVTPTWGELAILMGVACFATAGHYTMTLAFRAAPLA 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + ++ + + +D + ++V A+ + +
Sbjct: 237 VTQPVTFLQLVWAVLLGALVFDEGVDIFVVLGGMVIVGAVSFISWREAVLKRR 289
>gi|291440910|ref|ZP_06580300.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291343805|gb|EFE70761.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 334
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/295 (9%), Positives = 73/295 (24%), Gaps = 29/295 (9%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + +G + + + L + L V+ RV + + V G L
Sbjct: 18 GLGLALLSAVAFGGSGVAAKPLIEAGLDPLHVVWLRVTGAALVMLPLAVRHRGLLRRRPG 77
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ F +A + AL + ++ P + + + +
Sbjct: 78 L--------LAGFGLFAVAGVQACYFAALSRIPVGVALLVEYLAPALVLGWVRFVQRRPV 129
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI----- 198
I +L + L + + + V S +G
Sbjct: 130 TRAAAIGVVLAVGGLACVVEVWSGLGFDALGLLFALGAACCQVGYFVLSDQGSDAGDEAP 189
Query: 199 --------------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + E L + +
Sbjct: 190 DPLGVIAYGLLVGAAVLTVVARPWSMDWSVLAGSAEMDGTPVAAFVLLAWIVLVATVVAY 249
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R G++ ++ V + +L + + + +V++ +
Sbjct: 250 VTGVLSVRRLSPQVAGVVACLEAVIATVLAWVLLGEHLSAPQIAGGAVVLLGAFI 304
>gi|169344405|ref|ZP_02865374.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
gi|169297325|gb|EDS79434.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
Length = 308
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 10/304 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + + I +G LE + + + R SLP + I+ L
Sbjct: 2 KLKGIILTILSSITFGFAFTLGPMTYGLEGSNPVTLTFLRNFLSLPFLLVIILLLKIDLR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K L++ +G + + T L ++ F + ++ FVT +F
Sbjct: 62 VTKKQLRDLIILGFVGNAITTLMLNMAFACIDVGIVTPIHFTYPIFVTLGCVIFFHEKLS 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+++ L I + + + + S L + + ++ F I G E
Sbjct: 122 KQKVFALIIAMSGIGCFFITALNSASFGKSTLLGLILAVASGMFYAFYIIFMDKSGLKSE 181
Query: 200 MCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L + L I L + GIK
Sbjct: 182 PPFKITFYVAIASTVGMFIYGMLTKQLVLSSLTHKAWGLSAIFAFLCTVVALSLLQVGIK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S ++ P+ ++ +L + I ++ I ++ +++ + K
Sbjct: 242 YIGASEAAVISTFEPITSVIFGAILLGEEITLMKIIACSLIFAGVLILSFAKEKSKSNIK 301
Query: 313 TKKS 316
K+S
Sbjct: 302 IKES 305
>gi|83719299|ref|YP_442893.1| hypothetical protein BTH_I2372 [Burkholderia thailandensis E264]
gi|257139109|ref|ZP_05587371.1| hypothetical protein BthaA_07866 [Burkholderia thailandensis E264]
gi|83653124|gb|ABC37187.1| membrane protein, putative [Burkholderia thailandensis E264]
Length = 311
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 84/302 (27%), Gaps = 15/302 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + + R L + ++ +
Sbjct: 2 KTKLVGYLYLVAAMTGVGSTVVASRIAGDGLPPFTAAALRFLIASVPLYALMRAQRHRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L ++V +A + + P +S L +V L
Sbjct: 62 RLAP----RDVGLLVVQAACGGVGYTVLLLAGTHLSSPVDAGVMLGTLPAMSTLLAAVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPV 190
+ER AA L +L++T G S+ AV A
Sbjct: 118 RERQTPRDWSAAALATAGVLLVTFTPGRATPSMRALVGDALVLAAVACEAVFILMNRRLA 177
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + AL V + + +
Sbjct: 178 VPLAPLVQSTAMSVLGLALALVPAAFEWRAATAAWQPAALAATAYYALVPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G R + + AP ++ + + + +R +VV ++V L +
Sbjct: 238 GSARTSGTEAALFTAVAPASAVLFAAAVFGESPGGMRFAGIAMVVAGVLVGALRPRRGAK 297
Query: 310 KN 311
++
Sbjct: 298 RS 299
>gi|229191473|ref|ZP_04318457.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 10876]
gi|228592048|gb|EEK49883.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 10876]
Length = 294
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 99/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KHTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L+ ++++ +L + ++I+ G +L A + +
Sbjct: 121 KEKLSARRLLSTILATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQTSSIGTVNTYVIFGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELIDASIGSLFFFLQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|209885435|ref|YP_002289292.1| permeases of the drug/metabolite transporter [Oligotropha
carboxidovorans OM5]
gi|209873631|gb|ACI93427.1| permeases of the drug/metabolite transporter [Oligotropha
carboxidovorans OM5]
Length = 311
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 95/294 (32%), Gaps = 15/294 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ ++G + A ++WG+ +++L ++ L + ++S + +
Sbjct: 19 SQPPHDRRVVGYGLLLIATVIWGVNWPVSKWLLNELPPLTIRGLPGVFSAMMLAGLVFAK 78
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + L+ + + +L+ T+ PV + L
Sbjct: 79 GQSLRAPRGEWGKLVLYAALMVGFWMGLMG-----LSLVHLPASETAILGATIPVWAAGL 133
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L +RL+ L+I+A + I ++++ I + + A A
Sbjct: 134 AWPMLGDRLSVLRIVAIAMAIGGVVLLMGGDSISVSWEKMPGIAYALIAALLFALGAVLA 193
Query: 195 GFFIEMCVLAIPALFYVVWNGFS---------GGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
M A++ + F + + LF + +
Sbjct: 194 KRRPIMLPPLPGAVWQIGLGCFPVALIGLLFEHPHFGGMSMLGWLLFGFSTIFQGAIGYA 253
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++R ST I P+ +V+S L +P+ + + + +V+
Sbjct: 254 CWFAALERLPASTAAIGTLIVPVTGVVASAISLGEPLGVPQIGALALTIAGVVI 307
Score = 41.4 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 40/139 (28%), Gaps = 1/139 (0%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
IA + + I A+ F+ G+ +
Sbjct: 35 IATVIWGVNWPVSKWLLNELPPLTIRGLPGVFSAMMLAGL-VFAKGQSLRAPRGEWGKLV 93
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ L+ F + + S I+ T P+ + +L + +R + +
Sbjct: 94 LYAALMVGFWMGLMGLSLVHLPASETAILGATIPVWAAGLAWPMLGDRLSVLRIVAIAMA 153
Query: 294 VIAMVVYLLPTVINSGKNK 312
+ +V+ + I+ K
Sbjct: 154 IGGVVLLMGGDSISVSWEK 172
>gi|54022269|ref|YP_116511.1| hypothetical protein nfa3050 [Nocardia farcinica IFM 10152]
gi|54013777|dbj|BAD55147.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 352
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 84/297 (28%), Gaps = 30/297 (10%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L +LWG+ L + L+ L + R + V + L L
Sbjct: 10 LLGLTVVLLWGLNFLAIRAGLDHFPPLFFAALRFVVPAVPVLLFVPRPRVPLRWL----- 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L + + F L S + +V LG++ L+ERL
Sbjct: 65 ------LLYGTGFGVLQFAFLFTAMREGMPTGLASLVLQSSAPFTVVLGALLLRERLAPR 118
Query: 147 QIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
Q++ + + ++ L + L+ + + + +
Sbjct: 119 QLLGLAIATGGITVIGADRLEQAALLPLLLTLAAGLGWAFGNIGSRLAVASGPGVDPLHL 178
Query: 199 EMCVLAIPALFYVVWNGFSGGE----------HFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + +P + + + G G L +++
Sbjct: 179 TLWMTVVPPIPLFALSALTEGPGAGVRALAELASPTGPAALAGLAYIVVLGTVAGSGLWT 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y + R V + P++ I ++ +L + +V+ + +
Sbjct: 239 YLMSRYPAGAVAPLSLLVPVVGIAAAWLVLDETPSGTELAGAVVVIAGAFLTTVGGR 295
>gi|297622803|ref|YP_003704237.1| hypothetical protein Trad_0558 [Truepera radiovictrix DSM 17093]
gi|297163983|gb|ADI13694.1| protein of unknown function DUF6 transmembrane [Truepera
radiovictrix DSM 17093]
Length = 319
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 86/280 (30%), Gaps = 12/280 (4%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+F LWG + L +S + R + ++ L + L
Sbjct: 27 LFILATLWGSAFPGIKLGLTGLSAGNLTLLRFTVASLCFALFLLVTRKRLLPDRRDLPYF 86
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
VG L + LA+++G S P I+ + L +RL+ L
Sbjct: 87 FLVGFLGITVYHLALNYGQRFV-----SAGAASLIIATAPAITAVVAFFLLNDRLSLLGW 141
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIA------VTWSAYCFARKTIPVGSSEGFFIEMCV 202
LL + ++ L G L A +A+ + + E +
Sbjct: 142 SGILLSFTGVALIVLGDGGALSLNPFALLILLSALVTAFYTVLQKPLLRRYEAVEVTAFS 201
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L +V+ + G + + + FSY I R ++
Sbjct: 202 TWAGTLPLLVFAPGLVADAADAGRTALLAAVYIGVFPAAVAYAQFSYAISRLPVTLATSF 261
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y P+ ++ + +L + + + + + +VV
Sbjct: 262 LYAVPVFSLLFAWLLLGEVPSALMLVGGAVALSGIVVVGY 301
>gi|291297263|ref|YP_003508661.1| hypothetical protein Mrub_2894 [Meiothermus ruber DSM 1279]
gi|290472222|gb|ADD29641.1| protein of unknown function DUF6 transmembrane [Meiothermus ruber
DSM 1279]
Length = 288
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/275 (10%), Positives = 86/275 (31%), Gaps = 16/275 (5%)
Query: 33 AYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A + WG T + + L+ + ++ R + ++ + ++ +
Sbjct: 15 ATLFWGSTFVLVKDGLQTLGPGQINFVRFVIAMLVFLPFLF------------RRDARLW 62
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ +L V + L ++F V+++ + L +RL +AA
Sbjct: 63 WAGLELGVMLFVAYLTQTVGLQYTTASRSAFIT-TLYVVALPMLLGLLGQRLGWPIWLAA 121
Query: 152 LLIILSLLIMTLHSG--IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
L + + +++ P + + + + + +
Sbjct: 122 GLAVAGVGLLSYDGSPPNPGDLWTLGTALAYALYIWRLELFARRFSTLPLTGIQMLTVAL 181
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + P L + ++ + + G +R ++ P+
Sbjct: 182 LSLVWMLWEKPVWNTADFPYFSLLYLGLVASALCIWLQALGQRRVPAPQAAVIFTLEPVY 241
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +L + + I G++V A ++ L +
Sbjct: 242 AAAFAYILLGERLGLQGLIGAGLIVAATLISQLRS 276
>gi|118590689|ref|ZP_01548090.1| hypothetical protein SIAM614_05963 [Stappia aggregata IAM 12614]
gi|118436665|gb|EAV43305.1| hypothetical protein SIAM614_05963 [Stappia aggregata IAM 12614]
Length = 311
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/318 (13%), Positives = 104/318 (32%), Gaps = 17/318 (5%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLP 65
K S + + + A +L + + ++L ++ +EV R + L
Sbjct: 1 MKRQSSSSQAGDVEQNPLTAIFLMTSAMLLLPVMDITAKYLSAELPPIEVTFGRFFFQLL 60
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ K + +L F A+ +F
Sbjct: 61 ISLGIALVTGR------LMHLKGKQPVVNYLRGILLGTASLCFFTAVKYMSVATAISIFF 114
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
V P++ L +V LKE++ +I A L+ +L +I+ + + +++ +A F+
Sbjct: 115 VEPMVLTILAAVLLKEQVGPRRIGAILVGLLGAIIVLRPTLAEIGIVSLLPVATAVLFSF 174
Query: 186 K---------TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
+ + + L + + + G F + + P T L
Sbjct: 175 YLLLNRLYPVRDDLLTIQFSAGLSGSLLLGVGLLIGYLTGIEGMEFVMPDAPQTGLLALI 234
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
GL++ + +R S + ++Y + + + D + +++++
Sbjct: 235 GLISFAGHGLVVSAFQRGNASLLAPLQYIEIVSATLFGYLVFSNFPDGPTWLGIALIIMS 294
Query: 297 MVVYLLPTVINSGKNKTK 314
+Y+ + +K
Sbjct: 295 -GLYITHRERKLRQMASK 311
>gi|320334781|ref|YP_004171492.1| hypothetical protein Deima_2187 [Deinococcus maricopensis DSM
21211]
gi|319756070|gb|ADV67827.1| protein of unknown function DUF6 transmembrane [Deinococcus
maricopensis DSM 21211]
Length = 294
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 96/294 (32%), Gaps = 10/294 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G V A +LWG+ ++ + + +S EV R ++ +
Sbjct: 1 MRQDALTGAALVLTAAVLWGLLGIFGKAIQASGLSAPEVAFWRATLGGG------LFAAH 54
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+ + A + F ++V + A+ L S + P
Sbjct: 55 ALATRAAMPRGRDAWVTVAFGLLGVSVFYASGQLAVRYGGASLASVLLYTAPAFVALGAW 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ER + A + + +++L G + + A+ W ++ + F
Sbjct: 115 ALWRERPGAREAGAVAGTLAGIALISLGGGQGVHASGAALGWGLLSGLTYSLYYLYGKVF 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLG--NIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F A+ AL V F L + L + +S G++R
Sbjct: 175 FARYAPAALYALALPVGAVGLVPFVQFAPKSPGTWGLLVALAALSTYLAYTAYSAGLRRL 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ ++ P++ + + + + + + +VV + ++ LP +
Sbjct: 235 PATQASVIASIEPVVAALLAAVVFAERLSAAAIVGAALVVGSALLLSLPKRAQA 288
>gi|255505842|ref|ZP_05348429.3| putative membrane protein [Bryantella formatexigens DSM 14469]
gi|255265595|gb|EET58800.1| putative membrane protein [Bryantella formatexigens DSM 14469]
Length = 325
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 77/287 (26%), Gaps = 10/287 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WG+ + ++ V R L + + K
Sbjct: 27 LILLLTALIWGVAFVAQSVGMDYVGPFTFNCVRFLIGGIVLLPCMALLKKLNPPEKRADG 86
Query: 87 ----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ V L V ++ F +I +G F K+
Sbjct: 87 SGKEKKNLILGGVCCGVALCVASCLQQLGIMYTSVGKAGFITAFYIIIVPVIGLFFRKKC 146
Query: 143 LNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
I LL + L + + G + + + A ++G +
Sbjct: 147 -GITVWIGVLLALAGLYFLCITEDLTIGRGDVLVFLGALMFAVHIMVIDHFSPLADGVAM 205
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V L L + + G K +
Sbjct: 206 SCIQFFVSGGLCAVPMLLFEKPQIGQLLAAWQPILYAGVLSCGVAYTLQIIGQKGMNPTV 265
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ ++ +++ + IL Q + + ++ A+++ LP +
Sbjct: 266 ASLILSLESVISVLAGMVILHQELSGREILGCILMFAAILLAQLPPL 312
>gi|26991197|ref|NP_746622.1| hypothetical protein PP_4512 [Pseudomonas putida KT2440]
gi|24986245|gb|AAN70086.1|AE016648_4 membrane protein, putative [Pseudomonas putida KT2440]
Length = 296
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/295 (9%), Positives = 92/295 (31%), Gaps = 8/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + + +G+T ++ + S ++ R +++ + G
Sbjct: 1 MNHRTALGALHIGALFFGLTGVFGKLATSASPAIIVFGRATFAVLALALFASLAGPGWQR 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +G ++ + ++ A+ + + + P +V L S+ +
Sbjct: 61 LSSQDARRLLLGGVLLAGHWVSF-----FIAVKVGGVAIATLGFASFPAFTVILESLLFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---FF 197
ER++ + + +L+ + L+++T + + + + + + G
Sbjct: 116 ERIHRNEAVLVVLVSIGLILVTPAFDLASEATGGLLWALLSGLLFSLLSLTNRAGSGRLP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F+ + + + +F + K
Sbjct: 176 AVQAALWQNLVVGLCLLPFAAPGLADVAALDWLWIALLGIFCTGVAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T ++ P+ I + + + + +++ A+V+ + +
Sbjct: 236 TAAVVFGMEPVYGIAVAWAVFAETPTVRMLLGGALIIFAIVLSSRLAAEQPPRQR 290
>gi|110632676|ref|YP_672884.1| hypothetical protein Meso_0315 [Mesorhizobium sp. BNC1]
gi|110283660|gb|ABG61719.1| protein of unknown function DUF6, transmembrane [Chelativorans sp.
BNC1]
Length = 319
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/312 (13%), Positives = 100/312 (32%), Gaps = 15/312 (4%)
Query: 3 KGATKKEYSKGLSKENASLP-------TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLE 54
+ + + ++ ++++ P T +G + A +L+ + ++L +V +
Sbjct: 6 QRSPRNSEDPSMTTQSSTGPLAEQHDTTRLGIFVMLAAMLLFSLNDALGKWLVATYTVGQ 65
Query: 55 VISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLT 114
V+ R + +L + + L + G+ A F +A+
Sbjct: 66 VLLLRSVVALIVLAPFL------WKGGLRPLIQLERPGLQFLRVLFAAGEVFSFYFAVAY 119
Query: 115 RQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI 174
+ P+ L + L E++ + A + + +++ S L A+
Sbjct: 120 LPLADVMTYWLAAPIYVAALSPLLLGEKVGWRRWTAIFIGFVGVVVALDPSAAALTPPAV 179
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
++ FA + + G V + F+ + + D L L
Sbjct: 180 ISILGSFAFAFMMLSSRALRGTADTTLVFWQILAAGL-LGLFTAPFGWVTPSGLDFLLLG 238
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
G+++ S +K A + V EYT +V + I I+V
Sbjct: 239 LLGVISMLGHMGVSRAMKLADATVVVPFEYTLLPWAVVFGWAFFGDIPRSSVLIGGCIIV 298
Query: 295 IAMVVYLLPTVI 306
+ +
Sbjct: 299 ASGLFIFFRERK 310
>gi|315925748|ref|ZP_07921955.1| DMT superfamily drug/metabolite transporter [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315620857|gb|EFV00831.1| DMT superfamily drug/metabolite transporter [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 297
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 93/292 (31%), Gaps = 13/292 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F A ++WG + + + +++ R + + +
Sbjct: 14 AALFAAALIWGSSFFMMKRVVAVFPTYYLLAIRFTVAAVLLAAIF--------RKRLYRP 65
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + F L +F + VI FL + + R +
Sbjct: 66 GRQTLLAGLAVGGTMFTAYAFQTIGLTGTTPGKNAFLTAIYCVIVPFLYWLIDRRRPDRF 125
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I AA L +L + +++L G + + A + + +
Sbjct: 126 NIAAAFLCMLGIGLVSLDGDLSMGWGDALTLVCGFFFACNIVAVAKFSQKIDLIVLTIFQ 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A+ A+ + + + +++ + ++G+K + + I+
Sbjct: 186 FAVAAVCCWICAFAFERFPAQIPGSVLGELIYLTLFVSALAYLCQNFGLKHEEPAAAAII 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ S+ + + I F ++ +A+++ SG+ +
Sbjct: 246 LSLECVFGVLFSLIFYGEHLTLRLVIGFTVIFLAVILSETKLQFLSGQRARR 297
>gi|229110789|ref|ZP_04240352.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock1-15]
gi|228672668|gb|EEL27949.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock1-15]
Length = 294
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 97/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G +++ A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAIYLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKTASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 DLMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|217965418|ref|YP_002351096.1| integral membrane protein DUF6 [Listeria monocytogenes HCC23]
gi|217334688|gb|ACK40482.1| integral membrane protein DUF6 [Listeria monocytogenes HCC23]
gi|307570026|emb|CAR83205.1| conserved hypothetical protein [Listeria monocytogenes L99]
Length = 319
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 99/311 (31%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLIFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
VFL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 VFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + F ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFVFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|149916380|ref|ZP_01904900.1| hypothetical protein RAZWK3B_12337 [Roseobacter sp. AzwK-3b]
gi|149809834|gb|EDM69686.1| hypothetical protein RAZWK3B_12337 [Roseobacter sp. AzwK-3b]
Length = 304
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 94/298 (31%), Gaps = 8/298 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + M G VF A +LW L + +++ V +++ +R L ++ I
Sbjct: 5 TAPDLPARDMRGVTMVFFAGVLWSTVGLGIRLMDEAVVWQILFYRSLSLSVLLYVVIRLR 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+G + + V L + I+A+ T + P ++ L
Sbjct: 65 TGQDPFVLA----RRTGLAGVIGGLALVAAYTGGIHAVQTTSVANAMLLFATAPFMAAIL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPV 190
G + L+E + IA + + + +M +L+ + + +
Sbjct: 121 GRLILRESVRPATWIAIAVACIGIGVMVWDKFGAPSAIEGNLSALGSAFGFAVFTVALRW 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + + + + A+ + G +G L L +++ G
Sbjct: 181 GKAGEMMPAVFLSGLFAVPIMGAICLWQGLPLVIGAQDAGLSLGMGVFQVGAGLILYTIG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + ++ +L + F L + I++ A+ +
Sbjct: 241 SKTVPAVELTLLSLAEVVLGPLWVWFFLGETATPYTLAGGAILLSAIAGNAISGARRK 298
>gi|118468871|ref|YP_886543.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118170158|gb|ABK71054.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length = 324
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 89/287 (31%), Gaps = 13/287 (4%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WGI L + +E VSV ++ R + + + +L+
Sbjct: 7 SVIWGIPYLLIKVAVEGVSVPVLVLARTAVGALVLLPLAMSRAAWAPVLR------HWKP 60
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+LVF+ + W A +T P+I+ L + ERL ++
Sbjct: 61 VLVFAFFEIIAAWALLTDAERHLTSSMTGLLIAAAPIIAAVLDRITGGERLGVKRVAGLF 120
Query: 153 LIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ + + ++ + T A +G + L + A
Sbjct: 121 VGLSGVAVLAGPGLAGGHVWPVLEVLLVATCYAIAPLVAARFLGEVPSLPMTAACLTVAA 180
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L Y + + + + F +F I+ + + Y P
Sbjct: 181 LIYTTPAALTWPDAM-PSTRVLAALAALAVVCTALAFIVFFALIREVGAARALVFTYVNP 239
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + V +L +P+ +++ V+ + + +T
Sbjct: 240 AVALAAGVIVLGEPLTAYNIAGLVLILSGSVLATRKATHGNRERETS 286
>gi|91225474|ref|ZP_01260596.1| hypothetical protein V12G01_09105 [Vibrio alginolyticus 12G01]
gi|91189837|gb|EAS76110.1| hypothetical protein V12G01_09105 [Vibrio alginolyticus 12G01]
Length = 301
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 93/298 (31%), Gaps = 16/298 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G F+ + + + + + + V E+++ R L SL +F + K
Sbjct: 11 IGVRFMVLSAFGFALMSATVKHVGNYGIPVFEIVAARALVSLIISYFDV--------KRK 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L + + Y++ T + ++ PV + L FLKER
Sbjct: 63 RISVWGNNKPLLFARGAVGTMALMCVYYSVTTLPLAEATIFQYIHPVFTALLAVFFLKER 122
Query: 143 LNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + L +L + IM + + A+ + + V
Sbjct: 123 IQPSTFLCIALCLLGIYIMVSPETGQGSDSALPMFSVMIAILGAFGSSIAYVIVRKLSQT 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L + + G+ F + ++ T L+ G+ + ++ +
Sbjct: 183 EDSSVIIFYFPLVALPASLLLIGDDFVMPDLYLTFMLVLVGVFTQIGQLGLTKAMQTQQA 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y + ++ + + + G++V ++ + K
Sbjct: 243 GKASAYSYIQIVFSVLLGIIFFGEVPIIWTYVGGGLIVTGALINAFGHHLRLPFIKRN 300
>gi|115359616|ref|YP_776754.1| transporter DMT superfamily protein [Burkholderia ambifaria AMMD]
gi|115284904|gb|ABI90420.1| RarD protein, DMT superfamily transporter [Burkholderia ambifaria
AMMD]
Length = 299
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 58/295 (19%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G + A L+ + Y + L ++ L++ + R++W+ PG I +L+
Sbjct: 9 RGIVLSVLASTLFALMSAYAKLLAPLTGLDIFAWRIVWTAPGALALIALRGRWPALVELV 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++++ + + L SA +L + F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSVRDWRLLIALPASAALLGLQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ LQ A L + + +L +A+ + Y R+ I S F +E+
Sbjct: 129 RLDPLQWAAVAFAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLVAFAVEI 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L AL V + H + + L G G+L++ + + ++ G
Sbjct: 189 VLLCPVALAMVSTSATPVASH----PLLWAVLLPGLGVLSTLALASYLKASRMLPMALFG 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ Y P+L++ S+ +L + + + +G + +A+ + + + + ++
Sbjct: 245 ILGYVEPVLLVAVSLLLLGETLSVAQLATYGPIWVAVALTAWHSAMLMRRLPARR 299
>gi|317497550|ref|ZP_07955868.1| integral membrane protein DUF6 [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895109|gb|EFV17273.1| integral membrane protein DUF6 [Lachnospiraceae bacterium
5_1_63FAA]
Length = 293
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 88/293 (30%), Gaps = 5/293 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF-SG 76
+ G+L +F A I+WG + ++ V R L + I + G
Sbjct: 1 MKKEQIKGSLSLFLAAIIWGAAFVAQSVGMDYVGPFTFNCVRTLIGGIVLIPCIAFLNRG 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + + + LA + ++ F +I LG
Sbjct: 61 KVRKKTNFTEKKRLLLGGICCGVALATGSTLQQFGIMYTTVGKAGFITAFYIIIVPILGL 120
Query: 137 VFLKER---LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
K+ + +IA + + G + + + + +
Sbjct: 121 FLGKKCGLSVWISVVIALAGLYFLCITDGFSIGKGDIYVFLGAIAFSIHILVIDYFTQFN 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+G + I + V + + L + + + G K
Sbjct: 181 DGVKMSCIQFFICGILCFVPMMLFEHPEISMILLAWKPILYAGVMSCGVAYTLQIVGQKN 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ + +++ +L Q + I G++ IA+V+ LP I
Sbjct: 241 MNPTVASLILSLESVTSVIAGFLVLHQNLSQRELIGCGLMFIAIVLAQLPQKI 293
>gi|309389641|gb|ADO77521.1| protein of unknown function DUF6 transmembrane [Halanaerobium
praevalens DSM 2228]
Length = 297
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 93/276 (33%), Gaps = 9/276 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +++ + + + + + +FL + + E I R L + F ++ +
Sbjct: 6 KGIIYMIMSSVFFALMAVTVKFLGEFPLAEKIFFRNLVGIFFGLFLVI--------KNNK 57
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +++ + + YA+ + +P + L S+FL E+L
Sbjct: 58 SVKTNNLKIVLIRNLAGFIAIATYFYAISQMKMADAVILNKTSPFFVIILASIFLNEKLK 117
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI-EMCVL 203
+ + + L I L + S + A+ + + E VL
Sbjct: 118 KVHLFSLLFAITGALFVIKPSFNSSIIPALIALSAGVLSGISYTLLRHLRKTESSETIVL 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + F +F + ++ + + L G+ + + A+ V I
Sbjct: 178 SFCTFSTLASLPFLLTGNFVIPSLHEIIALFSLGIFAVLGQFFITQAYRFAEAGEVSIYA 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
YT + + + + + D + +++ A +
Sbjct: 238 YTNIVFSAIFGIVLFNEMPDALSFFGGALIISAAFI 273
>gi|297618924|ref|YP_003707029.1| hypothetical protein Mvol_0396 [Methanococcus voltae A3]
gi|297377901|gb|ADI36056.1| protein of unknown function DUF6 transmembrane [Methanococcus
voltae A3]
Length = 296
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 96/295 (32%), Gaps = 5/295 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S + G L+V A +G+ P + + VI R L + + +
Sbjct: 1 MSSSNLKGILYVLLASGSYGMVPYFALIAFDGGSNATTVILFRFLIAAIFLGAYLNIKKV 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + G L + A L++ ++ + V ++
Sbjct: 61 DKKITTTKIFDIALYGALFYVAAALSLVMAYYYIPTGAATVLHFVYPASVVIIMVALFKE 120
Query: 137 VFLKERLNHL--QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ E++ L II +L+ + GI L + V ++ Y A + S+
Sbjct: 121 KVIAEKIFCLLLSIIGVVLLANGEGGILNPYGIFLGLI-SGVLYAVYIVAAGQGKLTCSD 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + +++ + G L + + +F G+ +
Sbjct: 180 AIVSSYYLTVSASAILLIYGFLTNGIALNLTPMAWGAMAFIAIFSTAISLILFLRGVGQI 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S I+ P++ +V V +L + ++ +V++++ + S
Sbjct: 240 GASNAAILSTMEPIVSVVIGVLLLGESLNISMISGTFLVLMSVGLLTYSEKRKSK 294
>gi|56695178|ref|YP_165525.1| hypothetical protein SPO0261 [Ruegeria pomeroyi DSS-3]
gi|56676915|gb|AAV93581.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 288
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 91/294 (30%), Gaps = 9/294 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G+L++ A + + ++ + V + + G+F + + G
Sbjct: 2 SRQAENLSGSLYMVAAMGAFALEDMFVKSATAVLPVGQVLILFGLGGMGIFALLARWRGE 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ ++ V + L TS TP++ ++
Sbjct: 62 AAFVRPDRTLAIRSSFEVMGRICYTLA-------LALTPLTSTSAILQATPLVVAMGAAL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
FL E + + +A L+ + +L++ G S+ + +
Sbjct: 115 FLGETVGWRRWVAILIGLAGVLLILRPGMQGFVPASIFAVLGMIGFAGRDLATRAARPRL 174
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ V AL L + L L L + + ++R +
Sbjct: 175 SNAQLGVYGFGALVVSGVLALVWTGGATLPDAHTALQLGAAILFGVLAYECLTRAMRRGE 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+S + Y+ + ++ + + + D I I+V + +L +
Sbjct: 235 ISVIAPFRYSRLVFAMILGIVVFGETPDAATWIGSAIIVAGGIYNILREGRSRR 288
>gi|330810507|ref|YP_004354969.1| hypothetical protein PSEBR_a3622 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378615|gb|AEA69965.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 288
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 89/284 (31%), Gaps = 6/284 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ +++ + +G + +++ T+ L + V +++ R L V
Sbjct: 1 MVRDHDAPRPQLGIALCLLSMLIFASQDGVTKLLVRDLPVAQLVMVRYWVFLAFAVGYSV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
Y + + + LV I +G L Y V P++++
Sbjct: 61 YQGSLRTACRSQHPFLQITRALVGVGEIALFGFG-----LRYLGLAEMHALYAVFPLMTL 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L L E + + IAA + L L++ G A+ SA FA +
Sbjct: 116 ALAGALLGEFVGVRRWIAAAIGFLGTLVILRPGGGVFELAALIPLMSALGFAVFNVLTRR 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ F + G + + + + + + ++
Sbjct: 176 ISRDDSFATNMLYMGFFGAIAVTVPGLPGWVVPSPMQWVLMGVLATTGVVAQLLLIQALR 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
A +T+ YT + +F+ + D + +VVI
Sbjct: 236 YATAATLQPFNYTLLVFATFIGLFVFGELPDLWTVVGASLVVIG 279
>gi|268591093|ref|ZP_06125314.1| putative membrane protein [Providencia rettgeri DSM 1131]
gi|291313901|gb|EFE54354.1| putative membrane protein [Providencia rettgeri DSM 1131]
Length = 313
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/310 (10%), Positives = 89/310 (28%), Gaps = 17/310 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS-VLEVISHRVLWSLPGVFFAIVYFSG 76
+++G A LWG F++ + + + R+L + Y
Sbjct: 2 TMRKVSLVGITLALSAAFLWGTAGTAQSFVQGATAPYWIGAFRLLVACLFFHLLFFYRGA 61
Query: 77 GLSLLKDTLK----------NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
LK + + + + + FF T T+ +
Sbjct: 62 SRQSLKINERQQSENSSNRSRRYWRYITIAGICMGLYNLTFFAGIKATGIAIGTATTIGS 121
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSA 180
P+ + + ++ LK+ + L + M L ++ +
Sbjct: 122 APIWAGLMQAILLKKSPSLLWWLGTFCATAGGTWMVLSQSSSWQINTGGLLICLSAGFCY 181
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + + S + A+F V + + + + L
Sbjct: 182 ALYTLMSKKLVSIDSPLTITKHTFSIAIFIAVPIAWILAGTPTVSWVSIAVIFYLGLLTT 241
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ +++ +K T + P++ ++ + + ++ + +++ + +
Sbjct: 242 GVAYLLYTQALKHISAPTGVALGLIEPIVAFFLAIVVAHENVNMFAIVGLCLILAGLWLV 301
Query: 301 LLPTVINSGK 310
L S K
Sbjct: 302 LKSEGRVSKK 311
>gi|325845480|ref|ZP_08168771.1| membrane protein [Turicibacter sp. HGF1]
gi|325488499|gb|EGC90917.1| membrane protein [Turicibacter sp. HGF1]
Length = 286
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 108/283 (38%), Gaps = 2/283 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L + L+G TP+ ++ + + + +R L+SLP ++ + Y L
Sbjct: 1 MKRNQGVLLTILSAFLFGFTPILAKWTYSGGSNAISLTFYRALFSLPVLYGILKYRKVSL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + VG+L + T + ++ + ++ + FV ++ +
Sbjct: 61 KVTKSQWIHLLIVGILGQTVTTITLYATYDYLSVGMATTLHFVYPAFVVLAAVLYFKEKW 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ ++ + + ++ L + L+L +T++ + + + F +
Sbjct: 121 TRAKVISIILAMIGMLCFIDLSGHISLYGVFLALVSGMTYAFFILYIDKSGLKELDSFKL 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + V+ + L I L LI L++ F + GIK +
Sbjct: 181 TFYINLVVSAAVFVYGMGTHSLMINLTPIAWGLTLIISLLVSVFAVALLQIGIKLIGSTK 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ P+ +V + +L + + ++ I +++++
Sbjct: 241 ASILCLFEPITSVVFGLILLHEDLTILKLIGCILILLSAYAIS 283
>gi|294783419|ref|ZP_06748743.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
1_1_41FAA]
gi|294480297|gb|EFG28074.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
1_1_41FAA]
Length = 301
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 93/295 (31%), Gaps = 11/295 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L F LWG+ + +L + V+ +I +R++ + + +Y+ G +
Sbjct: 8 GMLSTFVGGTLWGVNGVMGNYLFLHKNVTTPWLIPYRLILAG-FLLLGYLYYKKGSKIFD 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V +++F + + A+ + + + P + + + K +
Sbjct: 67 ILKNPKDLVQIVLFGFIGMLGTQYTYFSAIQFSNAAIATVLTYFGPTLVLIYMCLREKRK 126
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+I++ L + ++ H L I S + + + G
Sbjct: 127 PLKYEIVSICLSSFGVFLLATHGDITSLQISFKALVWGILSALSVVFYTVQPESLLKKYG 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + ++ + + + ++ F ++ G+
Sbjct: 187 ASIVVAWGMMIGGIFITFVTKPWNISVTFDFVTFLVLMLIIVFGTIIAFILYLTGVNIIG 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ P+ + ++ L D + I F ++ + + K
Sbjct: 247 PTKASIIACIEPVAATICAILFLGVTFDFLDLIGFICIISTIFIVAYFDKKAKKK 301
>gi|138894840|ref|YP_001125293.1| EamA family protein [Geobacillus thermodenitrificans NG80-2]
gi|134266353|gb|ABO66548.1| Transporter, EamA family [Geobacillus thermodenitrificans NG80-2]
Length = 292
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/288 (10%), Positives = 83/288 (28%), Gaps = 4/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ ++++ A +WG + +++ L+ +S ++ R +L + + L
Sbjct: 2 KQPVLASVYLSLAASIWGGMYVVSKYVLDYISPFTLVWLRYAIALVVLVAIVAAKREPLP 61
Query: 80 LLKDTLKN---PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+G +V + + +F + +
Sbjct: 62 KHGRDWGMVIAIGVIGYIVSISLQFVGTKWSNAHTASLITASTPAFVVLFARWLLGEALT 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L +++ L + +G L A + S
Sbjct: 122 WRKLAALLLATAGVIVIVGLGDGGESTFAGNMALVGAAVTWALLSVLVKMASARLSVLSI 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++A + ++ + L + + F +++ G++
Sbjct: 182 TTFAILVAFIGMTPMLMVESPELTAVHWNALVVLGVLYLGIVSTAGAFFLWNKGLEMIDA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + PL+ + L + +D I ++V +VV +
Sbjct: 242 GIGSLFFFFQPLVGSLFGWLFLHEQLDVSFWIGGVLIVAGVVVAVRSE 289
>gi|42780905|ref|NP_978152.1| EamA family protein [Bacillus cereus ATCC 10987]
gi|42736826|gb|AAS40760.1| transporter, EamA family [Bacillus cereus ATCC 10987]
Length = 322
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 98/300 (32%), Gaps = 17/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 2 MNPNRLKGIIMVVIGACLWGLSGTAAQQLFQYEHVSTEWLVTIRLLISGVILLIISSFGT 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + A M++F + + ++ + + ++ P+
Sbjct: 62 RKKEIFSIWKQRSDATKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYL 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKT 187
R + + I+ +L ++ ++ + + ++ ++ A+
Sbjct: 122 LFKWNVRPSKIDFISIVLSLVGTFLLLTNGSVHNLAVSTPAIVWGILSGLSLAFYSLYSK 181
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ I + I + + + + E L + + +F
Sbjct: 182 ELLDRWSSSVIVGWGMIIGGIGVTIVHFITTKEFILLSTMKYVKLNTLPLITFVIIFGTL 241
Query: 248 SY------GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 242 IAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGALCVIVMVLILS 301
>gi|94309953|ref|YP_583163.1| hypothetical protein Rmet_1008 [Cupriavidus metallidurans CH34]
gi|93353805|gb|ABF07894.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 312
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 94/295 (31%), Gaps = 15/295 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G L + + +G ++ + + V +++ R L + + F +
Sbjct: 11 HARDKLAGVLLIALSASAFGAMAIFARFAYAAGADVYGLLAVRFLLAAIAMGFVMRARGI 70
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + L + F AL Q L + ++ P+ L +
Sbjct: 71 SLPPWRRVLA------LAAMGGIGYVSQSYCFFTALNYAQASLVALLLYLYPLFVTILAA 124
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
VFLKE L +IA +L + + L +A+ V + + + G
Sbjct: 125 VFLKEHLTTSTVIALVLCSVGAGLTVGGGEGSSLGIALGVAAAVIYSIYIVVGARVTAGV 184
Query: 197 FIEMCVLAIPALFYVVWN-------GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
I +V+ G F + + F
Sbjct: 185 NAIATTTVICTAAALVYVTLGLLRAGAGVPPQFPASAGGWLALVAIALVSTVLAILTFFA 244
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G++R S ++ P++ +V + +L + I + + G+++ ++
Sbjct: 245 GLQRLGASKASMLSTLEPVVTVVLAAVLLGEHIGPTQAVGGGLILAGVLWLTRRA 299
>gi|224367636|ref|YP_002601799.1| hypothetical protein HRM2_05210 [Desulfobacterium autotrophicum
HRM2]
gi|223690352|gb|ACN13635.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 299
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 89/295 (30%), Gaps = 17/295 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + I WG T + +FL V+ L+ R + + G L ++
Sbjct: 3 YLKLLLTAIFWGGTFIAGKFLAGDVNPLDAAFVRFAIASIFLLVITRKLEGRLPRIQA-- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ AT + + F A + P++ L ++ KERL+
Sbjct: 61 --KLILPLILLGATGVFAYNILFFSAFHHINAGKAALIIATNPILISLLSALLFKERLDL 118
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++ ++ + +++ + G L+ +A + + + S
Sbjct: 119 IKGAGIIMSVTGAMVVISNGHLTDLVSYEIGRGELLIYGCVASWVAYSLIGKSVMGSLSP 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
V+ L V I F + GI+
Sbjct: 179 LASVCYSSVIGTVFLGIVSIFKGDLTTMGAWSIIDWFSLFYLGFFGTVLGFLWYYEGIRE 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P+ I+ + IL +P+ + +VV + +I
Sbjct: 239 IGPMKASVFINFVPISAILFAWLILGEPVTASLLVGAALVVSGVYSTNASGIIKR 293
>gi|222150731|ref|YP_002559884.1| hypothetical protein MCCL_0481 [Macrococcus caseolyticus JCSC5402]
gi|222119853|dbj|BAH17188.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 285
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/288 (10%), Positives = 85/288 (29%), Gaps = 6/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L++ A + + + + + + V++ R + + + + + L
Sbjct: 2 NDKIKGILWLVAASVGFSLMGAFVKLSGDLPVIQKSLFRNIIGMILPLYFVYKYKAPLFG 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ +L YA+ ++P ++ + FL+
Sbjct: 62 RRENQLTLILRSTFGMIGVLL------NYYAIDRMVLSDADMLNKLSPFFTILFCAWFLQ 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + Q I+ ++ + L + + + +AI A +
Sbjct: 116 EYIKKYQFISMIIAFIGALFIIKPNFSSDMYIAIIGVLGAMFAGLAYTTLRVLGSKEKFY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + + ++LI G+ + + A +
Sbjct: 176 TTVFYFSFVSTIVLIPLTLLTYQPMTNAQIIYLILSGVFATLGQFGLTIAYSYAPAKDIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I YT L + + + D + + + I+ A + +
Sbjct: 236 IFFYTTVLFSAIIGFILFNETPDLLSYLGYIIIFFASYYMFVKAKVKQ 283
>gi|329770172|ref|ZP_08261563.1| hypothetical protein HMPREF0433_01327 [Gemella sanguinis M325]
gi|328837073|gb|EGF86715.1| hypothetical protein HMPREF0433_01327 [Gemella sanguinis M325]
Length = 295
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 99/287 (34%), Gaps = 11/287 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS---VLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L WGI+ + ++L VS + VIS R+ ++ + +++F L
Sbjct: 8 KGALLTISGATCWGISGVLGEYLLNVSKINSMWVISTRMFYAGLIL-ITLLFFKDKTDLF 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ FS L + G + A+ + + F PV+ + + K
Sbjct: 67 RVFKNKKDIIRLINFSFFGLLICQGTYFLAIKYTNAGMATVIQFTGPVMIMAFYCIVNKR 126
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSE 194
++IA + +++M H L+++ + + ++ + +
Sbjct: 127 APLPREVIAITAALFGVVLMATHLDFSKLNISSVGLFWGILSAIGLASYNISSLHLTAKY 186
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G + + + + + S I + F ++ G++
Sbjct: 187 GVMPTIAWGLLISGIVIYFGTGSYYVPQGFSYIDFLCISGIILIGTIASFSLYLEGVRLI 246
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ P+ IV S +L + +++A++V
Sbjct: 247 GAVKGSIIGCLEPIAAIVFSFLLLGSTFGIFDILGAAFILLAVIVLS 293
>gi|332716731|ref|YP_004444197.1| S-adenosylmethionine uptake transporter [Agrobacterium sp. H13-3]
gi|325063416|gb|ADY67106.1| S-adenosylmethionine uptake transporter [Agrobacterium sp. H13-3]
Length = 322
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/280 (13%), Positives = 86/280 (30%), Gaps = 5/280 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L+ A+ ++ ++ L + V R V SGG+
Sbjct: 35 GYLYALIAFTIFAAQDGISKHLGSSYPPVFVAMLRYWAFAVFVLLMAARSSGGIRGAVMA 94
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + +LAV F I++ + P+I L L E +
Sbjct: 95 NR----PWLQISRGVLLAVQIVFSIFSFAVVGLAHSHSILASAPLIVAALSVPLLGEHVG 150
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A + + +L++ G + + +A+ A ++ M
Sbjct: 151 WRRWCAIFVGFIGVLVILKPDGEGFDNRLLITFIAAFMLALYSVLTRLGSKSDSAMTSFF 210
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ G ++ D +++ + + A ++V Y
Sbjct: 211 YTGVAGAAALTLVGPFYWVSLAPQDWGWMLALCITGMSGHYCLIKAFELADAASVQPFSY 270
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+L+ + V I + + + + IV+ A + +
Sbjct: 271 YQLVLVSIIGVTIYGEVVTSNMVLGAAIVIAAGLFTIWRE 310
>gi|284162931|ref|YP_003401554.1| hypothetical protein Arcpr_1838 [Archaeoglobus profundus DSM 5631]
gi|284012928|gb|ADB58881.1| protein of unknown function DUF6 transmembrane [Archaeoglobus
profundus DSM 5631]
Length = 278
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 88/283 (31%), Gaps = 16/283 (5%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + W + + + L + + +R L + P + ++
Sbjct: 4 LLLLVSLTWAGSFIAIKIALNYLDPCNLAFYRFLIATPIMLILF--------RPNLKIRL 55
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+++ + + + + AL S + + + L +FL+E +N +
Sbjct: 56 KDLPSLIILGLSGVTLLYVVQFTALELTTATKASILINTSVIFTAILSHIFLREGMNVRK 115
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGFFIEM 200
I+ L+ L + ++ + I + W+ Y K +
Sbjct: 116 ILGILIAFLGVFLVVSNGQINFTPNLGDLLMIFDGLLWAIYTVLGKAMLKSYRVEHLTTY 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
A+ + F + L L + F + + Y +K + V
Sbjct: 176 AFALGTAMLFPFALSKGLANPFEMSLGAILSLLYLSILCSVFAYLAWYYALKALPATNVA 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ Y PL + + +LK+ I + ++V+ +
Sbjct: 236 VFTYLIPLFTALLAYVLLKEEITMFTALGGILIVLGVYFVERD 278
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 9/104 (8%), Positives = 33/104 (31%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + +I + ++ + ++ + I+
Sbjct: 33 FYRFLIATPIMLILFRPNLKIRLKDLPSLIILGLSGVTLLYVVQFTALELTTATKASILI 92
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
T+ + + S L++ ++ + + I + + + + IN
Sbjct: 93 NTSVIFTAILSHIFLREGMNVRKILGILIAFLGVFLVVSNGQIN 136
>gi|325203539|gb|ADY98992.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
Length = 314
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 87/283 (30%), Gaps = 8/283 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+MG A +L ++++ L + +SV + + L + + +
Sbjct: 18 LMGIFLAVSAALLNATIGIFSKILMEQGLSVQHIAFLKTLTGFVFISILLCRTGFTRQIA 77
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLT-----RQGFLTSFSYFVTPVISVFLGS 136
+ K + +L+ A + T + V ++ L S
Sbjct: 78 DISRKKEAILPLLLKVAICAFFGIYTLFFFETTAYQYGNAANVVVVLMASAAVSALILDS 137
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ L ER+ ++ L +L + +++ G L L A+ S Y I G
Sbjct: 138 ILLDERICISSVVGVGLAVLGIAMISWTGEGSLGLILNAALAGSGYGCFSVLIKKFGLNG 197
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L ++ G E L L F + +
Sbjct: 198 GIYLTRILMFFGSIFLFIPSLEGIEDIHWQWSFIPPLLALSLLPTILGFYCTTKALDYLS 257
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ V + E PL V + L + + + +++ +V
Sbjct: 258 AAKVQVTELAEPLFAAVLAWLFLNEIPEGRFFVGAILIIAGIV 300
>gi|297181168|gb|ADI17364.1| permeases of the drug/metabolite transporter (dmt) superfamily
[uncultured delta proteobacterium HF0070_30B07]
Length = 298
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 89/286 (31%), Gaps = 6/286 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A + + + ++L V ++ R ++ L + + +
Sbjct: 15 GIGLLILAVVFFDLMGAVIKYLGDVYPPQQLSFFRNIFGLVPSLLLLALSESWVKQGRKI 74
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +G+ +A + +L + + + P+ FL + LK ++
Sbjct: 75 IIRQWKLGLFR--GLFIAAAQFCYYLSLRHIEFAIATTISLSGPLFVSFLSAPVLKHKVG 132
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ IA L + +L++ + + + S +
Sbjct: 133 LIRWIAVFLGFIGILLVVNPDPRIFNWYSLLPLCSAFCYSSTSVTASLFDDSTPTPLMNM 192
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ AL + F G + + D L+L G+ ++ ++ + S +
Sbjct: 193 YTLVGALIGSFLSLFMTGTYTEIVQNQDWLWLFAMGVFGGTGVYLWVSAYRKTEPSNLSP 252
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y + + + + + ++ + +L N
Sbjct: 253 FQYFSIPISFLMGWMFFGEAPFSKLFPGVLFILAGGFLVILHDRKN 298
>gi|303246791|ref|ZP_07333068.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
gi|302491808|gb|EFL51688.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
Length = 305
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/303 (11%), Positives = 80/303 (26%), Gaps = 17/303 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P +G L A +LW + + + + + R L +L ++ +
Sbjct: 4 SPRSVGILAALGATVLWSGNFVAARGIAHDIPPFTLNFWRWLVALVC----LLPLALPKL 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
M + A T + P+ + L +F
Sbjct: 60 KADWPGMRRSWRSMAFMGLLGVTALNTLVYKAAQTTASLNMALLVPTAPITIIILSRIFH 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKT 187
E + ++ L+++L +LI+ G + R
Sbjct: 120 GEPVTPRRLGGVLVVLLGVLILFSRGDWRALARVHVAAGDLWALGGVVCFGVYSFCTRYR 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S EGF + + + + L + + ++
Sbjct: 180 PEDVSLEGFNAATFTWGLLLSLPGLVWEMAFLPVPTVSAKVAGGVLYVGIGCSFAAYLLW 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I G++ Y+ PL V + +L + I + +++
Sbjct: 240 TRAITAIGPVLAGLVYYSLPLFTAVEAALVLNERIAPFHVAGGVCIACGIMIATWRVRPR 299
Query: 308 SGK 310
+
Sbjct: 300 LRR 302
>gi|291559914|emb|CBL38714.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[butyrate-producing bacterium SSC/2]
Length = 293
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 86/291 (29%), Gaps = 5/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF-SG 76
+ G+L +F A I+WG + ++ V R L + I + G
Sbjct: 1 MKKEQIKGSLSLFLAAIIWGAAFVAQSVGMDYVGPFTFNCVRTLIGGIVLIPCIAFLNRG 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + + + LA + ++ F +I LG
Sbjct: 61 KVRKKTNFTEKKRLLLGGICCGVALATGSTLQQFGIMYTTVGKAGFITAFYIIIVPILGL 120
Query: 137 VFLKER---LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
K+ + +IA + + G + + + + +
Sbjct: 121 FLGKKCGLSVWISVVIALAGLYFLCITDGFSIGKGDIYVFLGAIAFSIHILVIDYFTQFN 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+G + I + V + + L + + + G K
Sbjct: 181 DGVKMSCIQFFICGILCFVPMMLFEHPEISMILLAWKPILYAGVMSCGVAYTLQIVGQKN 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ + +++ +L Q + I ++ IA+++ LP
Sbjct: 241 MNPTVASLILSLESVTSVIAGFLVLHQNLSQRELIGCVLMFIAIILAQLPE 291
>gi|229160769|ref|ZP_04288761.1| Transporter, drug/metabolite exporter [Bacillus cereus R309803]
gi|228622784|gb|EEK79618.1| Transporter, drug/metabolite exporter [Bacillus cereus R309803]
Length = 321
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 97/300 (32%), Gaps = 17/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 1 MNPNRIKGIIMVIIGACLWGLSGTAAQQLFQYEHVSTEWLVTIRLLISGVILLIISSFRT 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + A M++F + + ++ + + ++ P+
Sbjct: 61 NKKEIFGIWKQRSDATKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYL 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKT 187
R + + I+ L ++ ++ + + ++ ++ A+
Sbjct: 121 LFKWNVRPSKIDFISIALSLVGTFLLLTNGSVHNLAVSTPAIVWGILSGLSLAFYSLYSK 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ I + I + + + + E L + + +F
Sbjct: 181 ELLDRWSSSVIVGWGMIIGGIGVTIVHFITTKEFILLSTMKYVKLSTLPLITFVVIFGTL 240
Query: 248 SY------GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 241 IAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILS 300
>gi|223934108|ref|ZP_03626054.1| protein of unknown function DUF6 transmembrane [Streptococcus suis
89/1591]
gi|330832197|ref|YP_004401022.1| hypothetical protein SSUST3_0370 [Streptococcus suis ST3]
gi|223897217|gb|EEF63632.1| protein of unknown function DUF6 transmembrane [Streptococcus suis
89/1591]
gi|329306420|gb|AEB80836.1| protein of unknown function DUF6 transmembrane [Streptococcus suis
ST3]
Length = 302
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 110/299 (36%), Gaps = 10/299 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L A I WG++ + Q+L VSV + S R+L S + +
Sbjct: 3 EKRFGILITLIAGIAWGLSGVSGQYLMSRGVSVDMLTSLRLLVSGFFLVGLAYATAKEQL 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ + +G+ VF+ L ++ ++ A+ + ++ P++ + +
Sbjct: 63 LIVLKNR-KALLGIFVFAMLGLVLNQMAYLQAIYHTNAGTATVLQYLCPILVLAYTCLKN 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
+E+ + +++I+ +L + ++ H L I ++ + +
Sbjct: 122 REKPSGIELISIILAVAGTFLIATHGKLDELAVTPIGLFWGIFSAFTYALYIILPGKLIR 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + + F V + + L G+ F + F G+
Sbjct: 182 QYGSITVIGLGMLMGGFVVTLGLQTWQHRLPIDGGSFLGLLGIVGVGTIFAYTAFLKGVS 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + +V+++ + + + +++A+++ L ++ + K+
Sbjct: 242 MVGPVNGSLLASIEPIASVFFAVWLVNEQFYAIDFVGMLFILLAVLLISLKDILVAQKS 300
>gi|212704274|ref|ZP_03312402.1| hypothetical protein DESPIG_02329 [Desulfovibrio piger ATCC 29098]
gi|212672236|gb|EEB32719.1| hypothetical protein DESPIG_02329 [Desulfovibrio piger ATCC 29098]
Length = 316
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 80/287 (27%), Gaps = 17/287 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S + G L A ++W + + + + + R + +
Sbjct: 8 SAGKSMKQNTSGYLLALLAVVIWSGNFVVARAVADMIPPWQCNFWRWFTAFVTILPFAWR 67
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
++V S + + FF A + + + P+I +
Sbjct: 68 HLRE----DWPALRRHWRFVVVMSLLGVTLMNTFFYKAGQSTESLNMALIAPTAPIIILI 123
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAY 181
+ E + +++ L++ ++I+ G A
Sbjct: 124 FSRLLYGEAITPRRLLGMLVVATGIVILVSRGDMERLAALRFAPGDLWSLGGAASFGLYS 183
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
F R S GF L V S L +
Sbjct: 184 LFMRHRGTDLSVFGFSAATFGLGTLFCVPPVLAEMSWLPPVQWEPAVIIGVLYAGVGCSF 243
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
FC+++ I R GI+ Y+ P+ + +L + ++T + +
Sbjct: 244 CSFCLWTAAISRIGPVRAGIVYYSMPVFAATGAHIVLGEAVNTAQVV 290
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 42/131 (32%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+AV + F + + + + E + +
Sbjct: 25 LAVVIWSGNFVVARAVADMIPPWQCNFWRWFTAFVTILPFAWRHLREDWPALRRHWRFVV 84
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ L + + F + + + ++ TAP+++++ S + + I R + +V
Sbjct: 85 VMSLLGVTLMNTFFYKAGQSTESLNMALIAPTAPIIILIFSRLLYGEAITPRRLLGMLVV 144
Query: 294 VIAMVVYLLPT 304
+V+ +
Sbjct: 145 ATGIVILVSRG 155
>gi|206968754|ref|ZP_03229709.1| transporter, EamA family [Bacillus cereus AH1134]
gi|206735795|gb|EDZ52953.1| transporter, EamA family [Bacillus cereus AH1134]
Length = 294
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 99/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G +++ A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAIYLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGYYFIGTIILVGAAITWALLSIYVKTASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|126740789|ref|ZP_01756474.1| integral membrane protein [Roseobacter sp. SK209-2-6]
gi|126718085|gb|EBA14802.1| integral membrane protein [Roseobacter sp. SK209-2-6]
Length = 320
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 98/307 (31%), Gaps = 25/307 (8%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+++G A I + I + +FL + +++ R ++ + IV GG +L
Sbjct: 8 SLVGLFAAAGAAISFSIIDVIVKFLSGDYPLYQMVLIRSAVAMSILLLIIVPLEGGYHVL 67
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + F L F TP++ L V L E
Sbjct: 68 RTRQPR-----LHLTRCLAVLFANICFYTGLAVMPIADAVAIGFATPLVVTALSVVLLGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R + A + L ++I+ + AI A +A + + G
Sbjct: 123 RPGPWRWSAVAVGFLGVVIIMRPGTGTFQAAAILPFLGACGYATLHVLTRRAGGADSAAA 182
Query: 202 VLAIPALFYVVWNGF-------------------SGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ P++ +++ + + D I G+ +
Sbjct: 183 LSFYPSMGFLLVSAAVGLITGDGRFATGDNAAADFILRAWHWPAADDWWLFIALGVTAAG 242
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ S + + V EY A + ++ + + ++ + +++ + +V L
Sbjct: 243 GGYMVSLAYRLCEAGLVAPFEYIAMPMAVLWGILVFQEWPNLQVWCGSALIIGSGLVSLW 302
Query: 303 PTVINSG 309
N+
Sbjct: 303 RETRNNR 309
>gi|159045845|ref|YP_001534639.1| hypothetical protein Dshi_3305 [Dinoroseobacter shibae DFL 12]
gi|157913605|gb|ABV95038.1| protein of unknown function DUF6 [Dinoroseobacter shibae DFL 12]
Length = 313
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 94/312 (30%), Gaps = 14/312 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAI 71
G S + + G L A + + + + V + + R ++ P +F +
Sbjct: 2 GKSDTALGMSPVRGILLKLGAVTAFMVMASLVKATSETVPPGQAVFFRSFFAFPILFGWL 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ LK V+ + F L + F P+
Sbjct: 62 ALRGQLRTGLKAH-----RPVSHVWRGLVGTSAMAFGFAGLGLLPLPEATALRFAQPIFV 116
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCF 183
V L ++ L ER+ + A L+ + ++++ S A+ SA
Sbjct: 117 VVLAALMLGERIRLFRTTAVLVGLAGVIVVLSPRLGGFADLSADRAALGALFCLLSAGLA 176
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
A + + ++ + V + + + ++ L+ GL
Sbjct: 177 ALAHVFIRKMVATESTSAIVFWFTITSTVMSLLTLPFGWVWPSVEVAALLVMAGLCGGTG 236
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + + A S V +Y + LL ++ FI + IV+ + +
Sbjct: 237 QILLTSAYRFAPASVVAPFDYASMLLALLIGYFIFSEVPTVPMLAGAAIVMASGGAIIWR 296
Query: 304 TVINSGKNKTKK 315
+ +
Sbjct: 297 ERQLALARGAAR 308
>gi|49479667|ref|YP_036776.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49331223|gb|AAT61869.1| transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 303
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 90/288 (31%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++L G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISLSQGGSIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|330470619|ref|YP_004408362.1| hypothetical protein VAB18032_03390 [Verrucosispora maris
AB-18-032]
gi|328813590|gb|AEB47762.1| hypothetical protein VAB18032_03390 [Verrucosispora maris
AB-18-032]
Length = 332
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 90/291 (30%), Gaps = 11/291 (3%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + + ++ L + +RV + + L + +
Sbjct: 21 AAIWGSSFLFIKVGVAELHPLHLTLYRVGAGALTLLVVLALLRDRLPRDPRVWGHLCVIA 80
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTS--FSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +G L + + V+ + +++ + A
Sbjct: 81 AFGVAVPFSLFGYGEQRIESLLAGIWNATTPLVVLPMAVLVFRTERLTVRKAVGLALGFA 140
Query: 151 ALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+L++L + + G + A A A + +K + G + L +
Sbjct: 141 GVLVVLGVWQGVGGAHLVGQLMCFAAAACYGLAIPYQKKFVAGSELSGLSLSTAQLVLAT 200
Query: 208 LFYVVWNGF---SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + L L+ + F I I+ +T ++ Y
Sbjct: 201 AQLAIVAPLVAGAPPVPTSLSPSVVASVLVLGAIGTGLAFVINLRNIRIVGATTAAMVTY 260
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P+ IV +L + + + + IV++ + V +I + T +
Sbjct: 261 LIPVFAIVIGALVLDERLTWHQPVGALIVLLGVAVSQ--GLIGRRRAGTAR 309
>gi|323492255|ref|ZP_08097413.1| transporter, drug/metabolite exporter family protein [Vibrio
brasiliensis LMG 20546]
gi|323313568|gb|EGA66674.1| transporter, drug/metabolite exporter family protein [Vibrio
brasiliensis LMG 20546]
Length = 299
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 94/295 (31%), Gaps = 16/295 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F+ + + + + +++ + + E+++ R L SL + I K
Sbjct: 12 GVRFMLLSALGFALMSACVKYVSNHGIPLFEIVAARALVSLIISYIDI--------KRKR 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L+ I + Y++ T + +V PV + LG +FLKER+
Sbjct: 64 LSVWGNNKLLLLVRGFIGTIALMCVYYSVTTLPLAEATILQYVHPVFTALLGLLFLKERI 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGSSEGFF 197
+I + L M S + + A + + V
Sbjct: 124 QTSTMICIAFCLAGLWAMVQPSLNSNIDYQLPIFSVTTALLGALGSSIAYVIVRKLSQTE 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L + + + F ++P L+ G+ + ++
Sbjct: 184 DSSVIIFYFPLMALPTSVVLMWQDFIWPSLPLLFLLVLVGIFTQVGQYGLTKAMQTQAAG 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
Y + + V++ + + G++V ++ + + + +
Sbjct: 244 KASAYSYIQIVFSALLGVWLFNEVPSVWTFLGGGLIVTGAMINVFGKHLLTPLRR 298
>gi|253581675|ref|ZP_04858899.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251836024|gb|EES64561.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 301
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 87/293 (29%), Gaps = 18/293 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G + ++WG T + T+ L + +E++ R +
Sbjct: 1 MNNKNTLGHISAILTVLIWGTTFISTKVLLSHFTPIEILFFRFSLGFIALLLI----YPH 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L D + + + T+ + + + I
Sbjct: 57 KLVLTDKKQEKLFMLAGLCGVTLYFLFENIALTYSFASNIGVIVSISPFITGILTHF--F 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARK 186
+E+L + + I + +++ + L I +S
Sbjct: 115 LKQEKLKLSFFLGFFVSITGVALISFNGSTVLKLNPIGDILAVLAAATWSIYSIVTKKIS 174
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + I L + + F G F + L ++ F
Sbjct: 175 DYQYNTIQVTRRIFFYGLIFMLPALFFFDFHIGIDRFKEPLLLFNILFLGFGASAVCFVT 234
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ +K + + Y P++ + S FILK+ I ++ + + + + +
Sbjct: 235 WNLSLKLLGVLKTSVYIYAVPVITVAFSAFILKEKITSIAMVGTFLTLAGLFI 287
>gi|196038020|ref|ZP_03105330.1| transporter, EamA family [Bacillus cereus NVH0597-99]
gi|225865349|ref|YP_002750727.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|229092333|ref|ZP_04223505.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-42]
gi|229122903|ref|ZP_04252111.1| Transporter, drug/metabolite exporter [Bacillus cereus 95/8201]
gi|196031290|gb|EDX69887.1| transporter, EamA family [Bacillus cereus NVH0597-99]
gi|225786163|gb|ACO26380.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|228660487|gb|EEL16119.1| Transporter, drug/metabolite exporter [Bacillus cereus 95/8201]
gi|228691035|gb|EEL44802.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-42]
Length = 294
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVLITTFEK 293
>gi|16802538|ref|NP_464023.1| hypothetical protein lmo0495 [Listeria monocytogenes EGD-e]
gi|224502204|ref|ZP_03670511.1| hypothetical protein LmonFR_06737 [Listeria monocytogenes FSL
R2-561]
gi|254830520|ref|ZP_05235175.1| hypothetical protein Lmon1_04127 [Listeria monocytogenes 10403S]
gi|254900279|ref|ZP_05260203.1| hypothetical protein LmonJ_10710 [Listeria monocytogenes J0161]
gi|254911167|ref|ZP_05261179.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254935495|ref|ZP_05267192.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|16409871|emb|CAC98574.1| lmo0495 [Listeria monocytogenes EGD-e]
gi|258608072|gb|EEW20680.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293589094|gb|EFF97428.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 319
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 100/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKQEFGLILLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
+FL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 IFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVTVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + FG ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|312143450|ref|YP_003994896.1| protein of unknown function DUF6 transmembrane [Halanaerobium sp.
'sapolanicus']
gi|311904101|gb|ADQ14542.1| protein of unknown function DUF6 transmembrane [Halanaerobium sp.
'sapolanicus']
Length = 301
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/295 (10%), Positives = 85/295 (28%), Gaps = 15/295 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++ + + + +R+ +++ + + + +
Sbjct: 8 YILLAGGVFFLSLSGILVKIATS-PPMITAFYRMFFTVLLLTPYFIKNHRHKAAYFLDYR 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+LAVH+ +I ++ + + P+ ++ L +F KE L
Sbjct: 67 PLLV-------GFLLAVHFILWITSIEYTDISNSVIFVALQPLFTIILEFLFAKEDLRPG 119
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+I ++ + I+++ L + + G ++
Sbjct: 120 ALIGIIMAFIGTSIISIGDFYHLGDKLFGNFLALSAALFAASYLFIGRGVRKKLDYFPYL 179
Query: 207 ALFYVVWNGF-------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ Y F F G + L I +Y ++ S V
Sbjct: 180 FILYTYAAFFLGIGAYIFEIPFFGHGINNYLILLALAVGPTLIGHSILNYSVRYLPTSIV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ P+L + +L + + I ++ + + + S K
Sbjct: 240 SLSILGEPVLTTFLAWLLLNEQVLLTTLIGGAFILGGIYLASIYNYRKSKMQKKA 294
>gi|327400046|ref|YP_004340885.1| hypothetical protein Arcve_0129 [Archaeoglobus veneficus SNP6]
gi|327315554|gb|AEA46170.1| protein of unknown function DUF6 transmembrane [Archaeoglobus
veneficus SNP6]
Length = 295
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 93/299 (31%), Gaps = 19/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +F ++W + + + L ++S + +R L + P + A
Sbjct: 1 MARRLYIAALFLTMLIWAGSFIAIKIALRELSPFNLAFYRFLIATPLMLIACRNLR---- 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++V + T + + + AL S + + + L
Sbjct: 57 ----LPELKDLPNIVVLALTGVTLLYAVQFLALKLTTATNASILINTCAIFIALMSYILL 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS------ 193
ER L++ ++ + ++++ + S A+ F + +
Sbjct: 113 GERFTGLKVAGIIVSFVGVVMIISNGFNAGFSGQTALGDVLMVFDGLLWAIYTVLGKRLL 172
Query: 194 ----EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G A L + F L L L + F + ++
Sbjct: 173 EKYGAGALTAYAFAAGTFLLLPFALYEGIEDIFSLTPQAWASLLYLSVLCSVFAYVVWYA 232
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + V + Y PL + +VF+L + I + + + + + + ++
Sbjct: 233 ALSHMDATEVAVFVYLVPLFTAIMAVFLLGEEITPFIAVGGVLTIAGVYMVEQYSFRHT 291
>gi|296388912|ref|ZP_06878387.1| hypothetical protein PaerPAb_12215 [Pseudomonas aeruginosa PAb1]
Length = 294
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 96/296 (32%), Gaps = 8/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S+ G + + + + + + V+ V+ R L + +
Sbjct: 4 SQPQRRNSPTQGAAMLALSALFFALMGGLIREASSTVNNETVVFFRNLVGVLFFLPLALT 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + L + T + YAL + PV +
Sbjct: 64 RGIGPLRTRRPLSHLLR-------TTYGLGGMYCYFYALAHLPLTDAMLFSYAAPVFTPL 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +++KE L ++A L+ L +L++ SG + +A+ S+ A + +
Sbjct: 117 IAHLWIKEPLTRRMMVATLVGFLGVLLVARPSGAVVAPIALVGIASSLMAACAFVSIREM 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ ALF +++ + N + L L+G GL S S
Sbjct: 177 SDSEPAYRIVFYFALFGTLFSAVPLAWAWQPLNGRELLLLLGAGLFASLGQLTMSQAYAL 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +G + Y A + V + ++ + ++ A ++ LL
Sbjct: 237 ASPGVIGPIAYMAIVFAGVIAWLRWEELPSHTSLLGAALIFAASLIPLLGNRPAER 292
>gi|225869152|ref|YP_002745100.1| membrane protein [Streptococcus equi subsp. zooepidemicus]
gi|225702428|emb|CAX00305.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus]
Length = 308
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 106/298 (35%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G+ + A I WG++ + Q+L V + + S R++ S + ++ Y ++++
Sbjct: 6 KGSTMILLAGIAWGLSGVSGQYLIAHGVGINALTSLRLIISGLVLS-SMAYMRQRDAVIR 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L++S L ++ ++ A+ + +++P++ + S +
Sbjct: 65 LLKDKRLLRELLIYSLFGLTLNQYAYLLAIRYSNAGTATVLQYLSPILVLVYLSFKSRRL 124
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ A L IL +IM H L + + K + + G
Sbjct: 125 PAAGESCAICLAILGTVIMACHGDLSHLAINPIGLFWGLFAAVTYAYCVIKPAKLIADWG 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + + + G+ F + F G
Sbjct: 185 SLLIVGLAMLMGGVIFPILTRAWQYPLAMTYGNLRALFGIIGIGTIFAYTFFLKGASIIG 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ P+ + ++ ++K+ + + +++IA++V L ++ + + K
Sbjct: 245 PIKATLLASIEPVASVFFAIILMKETFHPIDLLGMALILIAVLVISLRDLLLAQRKKQ 302
>gi|209965691|ref|YP_002298606.1| integral membrane protein, putative [Rhodospirillum centenum SW]
gi|209959157|gb|ACI99793.1| integral membrane protein, putative [Rhodospirillum centenum SW]
Length = 304
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 86/286 (30%), Gaps = 9/286 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L++ + + + + L + ++++ R + V I +
Sbjct: 18 NLRGVLWMLLSALGFACMGAVVKLLGGRLDAMQIVFFRAAVGVLAVLPFIARAGWATAWP 77
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ YAL + F P+ + + +FL E
Sbjct: 78 RYPGRHLVR-------GLTGLAAIVCSFYALTMLPLATVTAITFAQPLFMIVIAVLFLGE 130
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + A ++ L +L+M + A+A +A A V + E+
Sbjct: 131 TVRWRRWTATIVGFLGVLVMLRPGAGMVEWAALAALGNALFVAASAAQVKAMPDDDRELT 190
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR-AKLSTVG 260
+L + + + + L L GLL + A+ S V
Sbjct: 191 LLLSFQVVSAIALVGPAWLVWVPPTPAEWLLLGLLGLLGVGSQAAVIRAYRVGAEASFVA 250
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+Y + +I + +D I+V + +
Sbjct: 251 PFDYVRLPVAAALGFWIFGEAVDGWTAAGAAIIVASTLYIARRGGR 296
>gi|158426219|ref|YP_001527511.1| hypothetical protein AZC_4595 [Azorhizobium caulinodans ORS 571]
gi|158333108|dbj|BAF90593.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 307
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 83/299 (27%), Gaps = 8/299 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + + G L + A + I+ ++L ++V V+ R +
Sbjct: 7 AATKPASRRLFGILLMCLAVSTFAISDAMAKWLGAHINVFMVVWARYVVHFVIALVVF-- 64
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + + + V + +L AL Q T F P
Sbjct: 65 ----NPWTVPGLLSTRRPVLQVTRSALLFGCTILNFTALQFLQLDQTVSIMFSAPFFVAL 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L E + A +L++ + A+ +SA C+A I
Sbjct: 121 FAGPMLGEWVGARHWAAISAGFAGILLVAQPGAGGIHPAALLSLFSAGCYALYAILTRML 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN-IPDTLFLIGYGLLNSFVFCIFSYGIK 252
L +L V + + L+ GL+ + +
Sbjct: 181 ADTDKTPTTLFYTSLVGSVVASLPLPFAWETPQEPAVLVVLLLIGLVAGGGHMLLIIAHR 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
A + + Y + MI+ + Q IV+ + V LL +
Sbjct: 241 HAPAAVLAPFLYVQIIGMIILGWALFHQVPSLWTLAGAAIVIASGVYLLLNERRERARE 299
>gi|126465462|ref|YP_001040571.1| hypothetical protein Smar_0556 [Staphylothermus marinus F1]
gi|126014285|gb|ABN69663.1| protein of unknown function DUF6, transmembrane [Staphylothermus
marinus F1]
Length = 285
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 88/287 (30%), Gaps = 8/287 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N + L + ILWG + + L V + R L S+ + I+++
Sbjct: 1 MRNNYPSILKHYLALLGTVILWGTSFPVIKILVSNVDEYTYVWVRGLLSIIFLTPLILFY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ K+ +K G+ + S V+ V L
Sbjct: 61 ISKKYVSKECVKGGLLAGIFYGLGLFFQG-------WGTSYTTASNSAFITGLNVLFVHL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ +R + + + IL L +++ + I L + + + + + S+
Sbjct: 114 IVASMYKRYSIRLFASLVSGILGLYLLSSPTTIGRLGDFLVLIGAVMWALQIIVFDKYSK 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + S + F+ + F + +YG K+
Sbjct: 174 CNPFILVYFMFTPTQTFILFDPSPADILETRINVLLGFIYLAIFCSIGAFALQAYGQKKV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
T + P+ + + L + + + I ++++M +
Sbjct: 234 PPETAATIFLLEPVFASIFAYMFLGETLTFKQLIGASFILLSMYLAS 280
>gi|150398763|ref|YP_001322530.1| hypothetical protein Mevan_0003 [Methanococcus vannielii SB]
gi|150011466|gb|ABR53918.1| protein of unknown function DUF6 transmembrane [Methanococcus
vannielii SB]
Length = 288
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 106/283 (37%), Gaps = 3/283 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G ++ + IL+GI P T++ L + + + R L + ++F + + L
Sbjct: 1 MSKVKGIMYTLISSILFGIMPFLTKYAYLGGANAVTTLLLRFLIAAVAIYFILNIKNINL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF-SYFVTPVISVFLGSV 137
+ ++ G +++ + ++ + ++ + + +I+VF +
Sbjct: 61 RIDRNIFLEILVYGAFLYALNTIWLYESYNYIPTGIATTLHFTYPVFVMLAMITVFKEKI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ + + L ++ + L + S + ++ Y + + + +
Sbjct: 121 GTNKVISMVFLFFGLYSLVGMNWTNLDFLGIIFSAGSGLIYAGYIVSAEKCSFSKLDPYV 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + A+F ++ + F + L +I F GIK S
Sbjct: 181 TIFYLSLLSAIFLFIYGFSTNSLTFKMDTSSYLLIIIISLFCTVLALVTFLKGIKLIGPS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ P++ I+ + +L + + +++I++ +
Sbjct: 241 NTAMLSTLEPIVSILIGIIVLHEVLSLEMAFGSIMIIISVFLV 283
>gi|52144727|ref|YP_082101.1| DMT family permease [Bacillus cereus E33L]
gi|51978196|gb|AAU19746.1| probable transporter, DMT family [Bacillus cereus E33L]
Length = 308
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 102/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L+ AV ++ Y
Sbjct: 119 AFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKAAITFGLLTAVGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTTVVIGWGMLIGGIALLICNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ LP
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIISIAWLNESFGAYQLLGGVCIVLSVIFLTLPQ 296
>gi|47565490|ref|ZP_00236531.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
gi|47557480|gb|EAL15807.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
Length = 321
Score = 75.7 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 96/296 (32%), Gaps = 17/296 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 4 NRLKGIIMVVIGACLWGLSGTAAQQLFQSEHVSTEWLVTIRLLISGVILLIISSFGTNKK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 64 EIFGIWKRRSNACKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 124 WNVRPSKIDFISISLSLVGTFLLLTNGSVHNLAVSTPAIVWGILSGLSLAFYSLYSKELL 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + + E L + + +F
Sbjct: 184 DRWSSSVIVGWGMIIGGIGVTIVHFITTKEFILLSTMKYVKLSTLPLITFVVIFGTLIAF 243
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
I+ + T PL I+SSV IL P + + + V+I +++
Sbjct: 244 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIIMVLIL 299
>gi|329934852|ref|ZP_08284893.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329305674|gb|EGG49530.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 312
Score = 75.3 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 69/280 (24%), Gaps = 1/280 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G ++WGI L + ++ +S V+ R + + G ++
Sbjct: 2 TARGWFLFSLMGVIWGIPYLMIKVAVDALSPSFVVCARCALGALLLLPFAIRQGGLPRVV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + A + + + T + + F + L
Sbjct: 62 RTHWRPMLAFACIEIIGPWWTLTDAERHLSSSTAGLLIAGVPIVGLVLARFFGSAEHLGP 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R ++ + + L L+
Sbjct: 122 RRLAGLLLGLAGVTVLTLPHLTGGDTRSLAEVAVTVLGYATAPLIVTRHLKDVPTLQLTA 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A +G T + + F +F IK A + +
Sbjct: 182 PCLALAAVVYAPAAVAGRPDAMPSAQVLTALAGLGAICTALAFVVFLELIKEAGPTRATV 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y P + + + L + + F +++ V+
Sbjct: 242 FTYVNPAVAVAAGALFLDERLTAGVLAAFALILTGSVLAT 281
>gi|262277718|ref|ZP_06055511.1| drug/metabolite transporter [alpha proteobacterium HIMB114]
gi|262224821|gb|EEY75280.1| drug/metabolite transporter [alpha proteobacterium HIMB114]
Length = 294
Score = 75.3 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 98/291 (33%), Gaps = 7/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G +++ + + + + + + + + ++I R L +FF I
Sbjct: 3 SKNQLGIIYMILSVVCFSLMDISVKLMSNSYPIGQLIFFRGFLGLIPIFFIIPLDRYKNL 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L LK + + A L F P+ + +FL
Sbjct: 63 LETSKLK------LHIGRAVAGTFAMANLYLGLKFLPIADAITISFAAPIFATIFSIIFL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + A +L I+ ++++ + FA +I + +
Sbjct: 117 SEIVRFYRWFAIILGIIGVIVVLKPGTTLFSYYSFFPILFCLGFATISILIKKLSKTEPD 176
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + ++ S + D ++L G+ S + I++A +S V
Sbjct: 177 YLISMFFTIALILTGCISYFFGWNEIKTEDIIYLFVIGICGSTGNIFLTMSIRKADISLV 236
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++Y + + I+S +FI + I + +++I+ + I K
Sbjct: 237 TPVKYLSLIFAILSGIFIFGESISYLTLFGAFLIIISTAIIFRREAIKKVK 287
>gi|317493666|ref|ZP_07952087.1| integral membrane protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918609|gb|EFV39947.1| integral membrane protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 283
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 93/281 (33%), Gaps = 8/281 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + A +L+GI+ ++ + + S ++ R +++L + ++
Sbjct: 1 MDRRRALWLMHGATVLFGISGIFGKLIAS-SAAVLVFGRAIFALAAMSLLLMKLKR---- 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + ++VG L +L HW F A+ + + + P L + +
Sbjct: 56 LPWRDLDLRSVGRLCACGALLCAHWVTFFIAVKVGGVAVGTLGFACFPAFVAILEGLLYR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFF 197
E+L+ + + LL+ + L+++T + V S+
Sbjct: 116 EKLSSSEYVLILLVTIGLVLVTPSFNFENSATEGLLWGVLSGLIYAILALANRHSAASVN 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+ F+ E + + + + +F ++ K
Sbjct: 176 GTQVCWWQNLAVIVLLLPFTYHELPQVSAMDWVWIACLGLICTGLAYSLFISSLQALKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ P+ I+ + + + ++++A+
Sbjct: 236 MAAMIIALEPVYAILIAWALFHEVPSLRMVSGGLLIILAVA 276
>gi|254512968|ref|ZP_05125034.1| membrane protein [Rhodobacteraceae bacterium KLH11]
gi|221532967|gb|EEE35962.1| membrane protein [Rhodobacteraceae bacterium KLH11]
Length = 323
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/311 (14%), Positives = 101/311 (32%), Gaps = 12/311 (3%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAI 71
++K S + A +L+ + + L E++ R L+++P + +
Sbjct: 12 AMAKSLTSHRPALAVALKLSALMLFTVMSALVKALSEDFPPGELVFFRSLFAIPVIIAWL 71
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + + + G L + + TP+ +
Sbjct: 72 I-----WRGELAQGFVTRKPMGHFWRGVLGTSAMGLSFTGLSLLPLPEVTAIGYATPIFT 126
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC------FAR 185
+ L ++ L ER+ ++I A L +L +LIM + A + A
Sbjct: 127 LILAAIMLGERIRLIRIGAVALGLLGVLIMIWPRLGSGTAETAATIGALCVLAATLARAF 186
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I + ++ +L + +G + + + L+G GL+
Sbjct: 187 VQIHIRQLVKVDHPAAIVFYFSLTATLLSGLTVFWGWTVPRWDQAAILVGIGLIGGVAQI 246
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A+ S + +Y+ L I+ F + V +V+ VV +L
Sbjct: 247 LITSSFRFAQASMLAPYDYSTMLFAIIIGYFWFDELPTLVMLGGAALVIAGNVVVILRER 306
Query: 306 INSGKNKTKKS 316
+S
Sbjct: 307 QLGLDQTEARS 317
>gi|182419542|ref|ZP_02950790.1| integral membrane protein domain protein [Clostridium butyricum
5521]
gi|237667066|ref|ZP_04527050.1| UAA transporter family protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182376577|gb|EDT74152.1| integral membrane protein domain protein [Clostridium butyricum
5521]
gi|237655414|gb|EEP52970.1| UAA transporter family protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 310
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 94/298 (31%), Gaps = 20/298 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
++K N + + + F +W T + ++ L +S E + +R L + +
Sbjct: 1 MNKANNTKIVFLNII-AFITVTIWATTFISSKILLNSLSPFESMFYRFLIAYFILLIIY- 58
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + L+ T ++++ A+ S PV++
Sbjct: 59 ------PKFHKISSLKEELIFLICGITGGSLYFLGENTAVKISLASNVSLILSTAPVLTA 112
Query: 133 FLGS-VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAY 181
L E+L +I ++ I + ++ + L + +
Sbjct: 113 LLAHYFTKNEKLTKDLVIGFIIAITGVFLVIFNGNFILKLNPLGDLLALGSSLCWAIYSI 172
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
C + + + + + F+ + L + +S
Sbjct: 173 CIKYFGNKYNTIYLTRKIFFYALLTMIPLLFTSQFNFNLSTLMQRDVIINLLFLSVVASS 232
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++Y + + + Y P++ ++ S F+L + + + +++ + V
Sbjct: 233 ICYVAWNYTVDKLGVIKTNNYLYFLPVITLILSYFVLGEKLTPYSFVGAVFILLGVYV 290
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 39/134 (29%), Gaps = 1/134 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
IA + + Y + H + +
Sbjct: 13 NIIAFITVTIWATTFISSKILLNSLSPFESMFYRFLIAYFILLIIYPKFHKISSLKEELI 72
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVRTIVF 290
FLI S F + +K + S V ++ TAP+L + + + + + I F
Sbjct: 73 FLICGITGGSLYFLGENTAVKISLASNVSLILSTAPVLTALLAHYFTKNEKLTKDLVIGF 132
Query: 291 GIVVIAMVVYLLPT 304
I + + + +
Sbjct: 133 IIAITGVFLVIFNG 146
>gi|125830494|ref|XP_001341822.1| PREDICTED: transmembrane protein 20-like [Danio rerio]
Length = 409
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 92/299 (30%), Gaps = 10/299 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A + + I L + +E + +++ + R + + V A++Y+ G +
Sbjct: 111 LGLMYSLLASVFFSIAALLVKKMEGMHAIQISAIRCFFQMLFVLPAMIYYKTGFLGPRGM 170
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
G L +A IL + + ++ + + + +
Sbjct: 171 RIYLFLRGFLGSNAMILLYYAVLQMPLADATVIMFSNPVFTALLAWIFLKERCTIWDVVF 230
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT----------WSAYCFARKTIPVGSSE 194
+ + +++I + + + A C +G
Sbjct: 231 TVFTLTGVILIARPPFLFGGELSGIEGDYSSHIKGTVAAFSGAVGAACTMVILRKIGKRV 290
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+F+ + A+ L V F E D L+ G+L + ++
Sbjct: 291 HYFLSVWYYAVLGLIECVVVLFILDEWTIPSCGWDRWTLMAIGVLGIAGQAFLTKALQIE 350
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
K V +M +L V L + V+ + L NS + K+
Sbjct: 351 KAGPVALMRTMDVVLAFVLQFLFLNRKPTWWSLGGALCVISSTSGVALRKWYNSTRQKS 409
>gi|229816027|ref|ZP_04446348.1| hypothetical protein COLINT_03080 [Collinsella intestinalis DSM
13280]
gi|229808341|gb|EEP44122.1| hypothetical protein COLINT_03080 [Collinsella intestinalis DSM
13280]
Length = 307
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 82/296 (27%), Gaps = 12/296 (4%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGV 67
+ S+ + + G LWG + +L + + V+S R++ +
Sbjct: 7 AGTASRAGSYHMNLRGVACALAGGALWGFSGTAVSYLFRSSGIDPMWVMSVRMVLAGILF 66
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
V K+ +L + L ++ ++ A+ + +
Sbjct: 67 LLFSVARGDRRPFELLRDKSAVRDLLLF-AGAGLFLNQFSYLMAIQATNSATATVLQSLQ 125
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
+ + V + ++I +L + ++T ++L A A
Sbjct: 126 LLPVAAVACVIGRRAPKRREVIGMVLALAGTFLITTGGDPSQMALPPAGLAFGLLAALGG 185
Query: 188 IPVGSSEGFFIEM--------CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
+ G + + + L + G +F L
Sbjct: 186 AGLAVFPGKILSTYGVSAVNGWAMLLVGLIAAPFVPDWGQAVASFDISCWVVFGALVVLG 245
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + G+ ++ P+ V S + + F +++I
Sbjct: 246 TWCSYLFYMQGVHEIGSLKTAMLSTVEPISATVLSALWIGVVFSPTDLLGFAMIII 301
>gi|254463036|ref|ZP_05076452.1| DMT superfamily, permease [Rhodobacterales bacterium HTCC2083]
gi|206679625|gb|EDZ44112.1| DMT superfamily, permease [Rhodobacteraceae bacterium HTCC2083]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 98/290 (33%), Gaps = 9/290 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + L++ + + + + ++L E E++ +R L + VF +F L
Sbjct: 7 PELRAALWMIGSILSFSFMAVAGRWLAEGYDTFEIMLYRSLTGIVIVFVFAAFFGTLSEL 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + F L + YA+ F +P+ + L +FL
Sbjct: 67 STRSAPTHVIRNLFHFVGQNL------WFYAITVIPLAQVFALEFTSPIWILILSPIFLG 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ +I+AA+L + +L++T PL + + +A CFA +
Sbjct: 121 ERMTRPRIVAAVLGFIGVLVVTRPGATPLNAGIVMAAIAAICFALTGLLTKRLTKTESLT 180
Query: 201 CVLAIPALF--YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+LA L T L GL + + A +
Sbjct: 181 SILAYLTATQAVFGLICAGYDGDIRLPTTESTPLLGLVGLAGLIAHFCLTKALSIAPATV 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V +++T L+ V + + + +D + ++ + +
Sbjct: 241 VMPIDFTRLPLIAVIGMLVFGEALDPWVFVGAALIFAGNYYNIWSETRKA 290
>gi|254824231|ref|ZP_05229232.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|293593464|gb|EFG01225.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
Length = 319
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 100/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLIFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
VFL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 VFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + FG ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|239947004|ref|ZP_04698757.1| S-adenosylmethionine transporter [Rickettsia endosymbiont of Ixodes
scapularis]
gi|241068620|ref|XP_002408488.1| S-adenosylmethionine uptake transporter, putative [Ixodes
scapularis]
gi|215492476|gb|EEC02117.1| S-adenosylmethionine uptake transporter, putative [Ixodes
scapularis]
gi|239921280|gb|EER21304.1| S-adenosylmethionine transporter [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 89/297 (29%), Gaps = 8/297 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + + +++L + EV R +S + +VY+
Sbjct: 1 MNDALKTYLTGIGWFLLSLVSSSTNDVMSKYLGTRLHSFEVAFSRFFFSSIVLLPFVVYY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + +L + Y L + F P+ ++ L
Sbjct: 61 GKN-------TLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E + + + ++ + L++ + +A FA I
Sbjct: 114 AVFFLNENIIWQRWVVTVVGFIGLVVTLKPHAEDFNPEILYFVLAAISFAMLDIINKKFV 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ + + +++ + + L G S +
Sbjct: 174 IKESMISMLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y ++ +++ FI + D I++ A + + +
Sbjct: 234 DATATAPYRYLELVISAIAAYFIFNEFPDKSTLHGAVIIIPATLFIIYSEKKTMSRK 290
>gi|167765681|ref|ZP_02437734.1| hypothetical protein CLOSS21_00169 [Clostridium sp. SS2/1]
gi|167712656|gb|EDS23235.1| hypothetical protein CLOSS21_00169 [Clostridium sp. SS2/1]
Length = 293
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 88/293 (30%), Gaps = 5/293 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF-SG 76
+ G+L +F A I+WG + ++ V R L + I + G
Sbjct: 1 MKKEQIKGSLSLFLAAIIWGAAFVAQSVGMDYVGPFTFNCVRTLIGGIVLIPCIAFLNRG 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + + + LA + ++ F +I LG
Sbjct: 61 KVRKKTNFTEKKRLLLGGICCGVALATGSTLQQFGIMYTTVGKAGFITAFYIIIVPILGL 120
Query: 137 VFLKER---LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
K+ + +IA + + G + + + + +
Sbjct: 121 FLGKKCGLSVWISVVIALAGLYFLCITDGFSIGKGDIYVFLGAIAFSIHILVIDYFTQFN 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+G + I + V + + L + + + G K
Sbjct: 181 DGVKMSCIQFFICGILCFVPMMLFEHPEISMILLAWKPILYAGVMSCGVAYTLQIVGQKN 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ + +++ +L Q + I G++ IA+V+ LP I
Sbjct: 241 MNPTVASLILSLESVTSVIAGFLVLHQNLSHRELIGCGLMFIAIVLAQLPQKI 293
>gi|325283915|ref|YP_004256456.1| hypothetical protein Deipr_1705 [Deinococcus proteolyticus MRP]
gi|324315724|gb|ADY26839.1| protein of unknown function DUF6 transmembrane [Deinococcus
proteolyticus MRP]
Length = 313
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 86/290 (29%), Gaps = 13/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ W + L++ + +R L + + + +
Sbjct: 23 LAAALVTILFWASAFAGVRASLQEFGPGPLALYRFLVASLALGGYALVARIPPPPARL-- 80
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + S + + Y +T S V PV++ L +ERL+
Sbjct: 81 ----LLPVTLVSLVGITAYHLLLNYGQVTVPAGTASIIIAVVPVMTALLSLALGQERLSP 136
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIA------VTWSAYCFARKTIPVGSSEGFFIE 199
+ + +L+ + +L++ L G + A SA F + +
Sbjct: 137 VGWVGSLVSLGGVLLIVLGRGQSVEFTGGALLVLGSALASALYFVLQKPLLAQVRPLQFT 196
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + +V+ + + + +SY I R +
Sbjct: 197 VWSLMTGTVPMLVFAPELLRVWGQAPLSAHLTVVYIGLFPAALAYLTWSYAISRVGAAAC 256
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ Y P+L + + L + + + + + +V+ +
Sbjct: 257 TNLMYITPVLATLIAYLWLGERPTRMTLLGGAVALGGVVLVNTLGRRPAR 306
>gi|16799571|ref|NP_469839.1| hypothetical protein lin0496 [Listeria innocua Clip11262]
gi|16412936|emb|CAC95728.1| lin0496 [Listeria innocua Clip11262]
Length = 319
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 101/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLIFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
VFL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 VFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + AL + G LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFALSRFMEPGGVSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + F ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFVFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|284047839|ref|YP_003398178.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
gi|283952060|gb|ADB46863.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
Length = 302
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 82/281 (29%), Gaps = 3/281 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L A + + + + L + E+ R + G+
Sbjct: 23 STAKKGILASILAAVFFTTMDVGAKKLIHLGTGEITFFR---GVIGLLLLPFMARMESRP 79
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +F L + L LT S F ++S L+
Sbjct: 80 VFSGKDHLLLHLRGLFGCACLLFFFYCLNGLTLGDAEILTQLSAFFMCLLSPVFLKGKLQ 139
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+R + AL + L + HS I + A C + G
Sbjct: 140 KRAVPRLGMIALGAAIVLQVWNYHSFNLFAVFGILSAFFAACAYVCIGIMTERGGHTQTE 199
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V + G H+ L + +++ L ++G + V
Sbjct: 200 LVFYFQLYSALGGLLLMGLGHWALPVGAEWGWILELALSALLGQVCLTWGCTHIHPTMVN 259
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ YT L I++ V + + + + ++V+ V+ L
Sbjct: 260 FLMYTGILFHILAGVLLWGETLTLYSWVGGSLIVLGSVLLL 300
>gi|229196860|ref|ZP_04323601.1| Uncharacterized transporter [Bacillus cereus m1293]
gi|228586583|gb|EEK44660.1| Uncharacterized transporter [Bacillus cereus m1293]
Length = 303
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 13/288 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPNLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHMALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGAIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + I ++ +++ + + K
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDIRSEK 297
>gi|163844800|ref|YP_001622455.1| hypothetical protein BSUIS_B0653 [Brucella suis ATCC 23445]
gi|163675523|gb|ABY39633.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 305
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 92/285 (32%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F +Y + ++ +FL+ +S E+ + + + F+
Sbjct: 2 LYGILLAFASYAAFAVSDACVKFLDGTLSPYEIAFY-----GAVLGLLAIPFTKKADDAW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L +FLKE+
Sbjct: 57 LDMFRTGNIKMWLLRTVTAAMGVIGSVAAFTYLSMAEAFALIFLLPTYVTILSVIFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L++ L + + A I + +
Sbjct: 117 VGWRRWSAVAIGFAGVLVVLRPGFRELSIGHLGALAAGMGGATSIIIFRVMGKNEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G + ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLVGPILICGALMAPSYQAPGTMQWVYLAGYGLLAALANILLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ ID I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDMPMLIGIVLITISGLFTFIRERQR 281
>gi|120436883|ref|YP_862569.1| hypothetical protein GFO_2546 [Gramella forsetii KT0803]
gi|117579033|emb|CAL67502.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
Length = 300
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 104/299 (34%), Gaps = 9/299 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G+L V +G+ + + + + EV ++ + G+ ++
Sbjct: 1 MDKSILKGSLLVALGACSYGMLTTFVKMAYEDGYTSHEVTFSQMALGVVGLLLINLFVRK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + ++ + T L + F+ A+ + + + V L +
Sbjct: 61 KQTGTTEKSRTRSKLKLIA-AGTTLGLTSTFYYLAVKYIPVSIGIVMLMQSVWMGVVLEA 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ +++ + +IIA + I+ L+ T + W T + S
Sbjct: 120 LLQRKKPSAKKIIAVIAILAGTLMATNVLNDSFEIDWRGIGWGVLAAMSYTGTIYCSNTV 179
Query: 197 FIEMC------VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+EM + I V + +I L+ +++ G
Sbjct: 180 SLEMHSLKRSLWMMIGGFMIVSVISLPFLIVEYQMDILLNWGLVLALFGTILPPLLYTAG 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + I+ ++ + F+L + +D ++ + G++++A+V L +S
Sbjct: 240 MPKIDVGLGAIISSIELPAAVLMAYFLLNEKVDVLQWLGIGLILLAVVQMNLKKRKHSK 298
>gi|229031059|ref|ZP_04187071.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1271]
gi|228730262|gb|EEL81230.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1271]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYAILKIA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L+ ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLSARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASVRF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + + + + F +++ G+
Sbjct: 181 SSLIITTYAIFFSLFFITPFMIWELQSTSIETVNTYVILGVVYLGVVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I ++V ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIVCSVFITTFEK 293
>gi|89094184|ref|ZP_01167126.1| Predicted permease [Oceanospirillum sp. MED92]
gi|89081439|gb|EAR60669.1| Predicted permease [Oceanospirillum sp. MED92]
Length = 299
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/302 (11%), Positives = 86/302 (28%), Gaps = 13/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ L + +WG + + +E + + R + + +++
Sbjct: 1 MQSKKLQADLMLLLVATIWGFAFVAQRLGMESLGPFGFNALRFMLGACSLIPLLLFVK-- 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ N + + + + +L F L+ F + ++ LG
Sbjct: 59 ---APESHCNKELLKSGLIAGGVLFAGASFQQAGLVYTTAGNAGFITGLYIILVPLLGLF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
+ N I L + L +++ + I A C+A + +
Sbjct: 116 IGQTT-NINTWIGGLFAVGGLYLLSFQDLSAINFGDILELLGAACWAAHVLIIAKLAPKL 174
Query: 196 ----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I V+ V + + + + +
Sbjct: 175 DNLRLAISQFVICALLSGIVALFIEADSFTVENAVSSWAPIAYAGLISVGIAYTLQIFAQ 234
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K A + I+ + +L + T I ++++ M+V LP ++ K
Sbjct: 235 KHAPPAHAAIIMSLEAVAAAFGGWLMLNEQFSTAGIIGCSLMLVGMLVSQLPALVKREKR 294
Query: 312 KT 313
+
Sbjct: 295 RV 296
>gi|47569875|ref|ZP_00240543.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
gi|47553464|gb|EAL11847.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
Length = 304
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 89/288 (30%), Gaps = 13/288 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ SVF+ E++ I
Sbjct: 72 ---IFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F +T + + +
Sbjct: 129 GGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + ++ I A +
Sbjct: 189 LSSTVCMLIFLPGMYTEILAAPLEVNMSVIYLGLFPTVLPYIALAFIISHAGAAEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
Y P+ + L + V I I ++ +V+ +P +
Sbjct: 249 YLTPVTACFIAWLWLGEVPTFVSIIGGVITILGIVIAHIPVLRKEKHR 296
>gi|310827709|ref|YP_003960066.1| hypothetical protein ELI_2120 [Eubacterium limosum KIST612]
gi|308739443|gb|ADO37103.1| hypothetical protein ELI_2120 [Eubacterium limosum KIST612]
Length = 314
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 23/315 (7%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ G L IL+G++ L+T+ V L ++S R + + +
Sbjct: 3 KKKTIKGCLCAIFCEILFGLSYLFTKHATTSVDSLTLLSWRFATAFLVINLCVAL----- 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++K +L+ + + + + +++ + + V P ++ G +
Sbjct: 58 GVVKISLRGKRLLPLFWIAVFQPVIYFVGETVGISLTTASESGAVLSVIPAATLIAGGLI 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP--------- 189
LKE+ LQ + + +++ L G+ + ++
Sbjct: 118 LKEKPTKLQAAGVCITMAGVMVCVLSKGMEASFNPLGYLMLLMSVISYSLYSVFSEKAVS 177
Query: 190 ------VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
F + A F T L +
Sbjct: 178 FSSAEKTYVMIAFGAVVFTAAALVQNLRTGTLPEFLSAPFTNPALLTAVLYQGIGCSILA 237
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F +++ I + + ++ I++ VF LK+ T + V+ + + L
Sbjct: 238 FFLYNLAIATIGTNRSASFVGISTVVSILAGVFFLKEQFSTFQAAGAFFVIGGVYLANLT 297
Query: 304 TVINSGK--NKTKKS 316
S + + K+
Sbjct: 298 RKSKSARPNRRDAKN 312
>gi|228953650|ref|ZP_04115691.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228806075|gb|EEM52653.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELIDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|188588590|ref|YP_001922147.1| transporter [Clostridium botulinum E3 str. Alaska E43]
gi|188498871|gb|ACD52007.1| transporter [Clostridium botulinum E3 str. Alaska E43]
Length = 293
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 90/281 (32%), Gaps = 6/281 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
N G +F+ + + + + + + L+ R L + I+
Sbjct: 4 NNLSNRSKGIIFIILSAFGFAMMSAFVKLSGDLPSLQKSFFRNLVASLIALSLIIKHKES 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + +L Y + + ++P + ++
Sbjct: 64 FFGKRENQNILILRSLFGTLGIVL------NFYTIDKLVLSDANMLNKLSPFFVIIFSAL 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E++N QI++ ++ L L + S + A+A A A + G
Sbjct: 118 FLSEKINTKQIVSLIIAFLGALFIIKPSFNLEVISALAGVGGAIFAAAAYTCLRVLGGKE 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+ + F + + + +LI G+ S + K A
Sbjct: 178 KHYTVVFYFSTFSSIVLFPFMMMSYKSMTMMQLTYLILAGVFASVGQFGVTLAYKYAAAK 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ I +Y+ L + S+ I D + I + I+ A +
Sbjct: 238 EISIFDYSNILFSAIISLVIFGALPDYLSVIGYLIIFAASL 278
>gi|218235573|ref|YP_002368083.1| transporter, EamA family [Bacillus cereus B4264]
gi|218163530|gb|ACK63522.1| transporter, EamA family [Bacillus cereus B4264]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G +++ A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAIYLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGYYFIGTIILVGAAITWALLSIYVKTASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|134046089|ref|YP_001097575.1| hypothetical protein MmarC5_1055 [Methanococcus maripaludis C5]
gi|132663714|gb|ABO35360.1| protein of unknown function DUF6, transmembrane [Methanococcus
maripaludis C5]
Length = 296
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 106/294 (36%), Gaps = 13/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + GT + + + +GI P T+F + + + R L + ++ + + L
Sbjct: 1 MNKVKGTAYTIYSSVAFGIMPFLTKFAYDGGANAVTTLMFRFLIAGLILYVFLKFKKISL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K V +L + A + A++ F A + + + +F+ PV L +
Sbjct: 61 KISK-----HNFVEILFYGAFLYALNTVFLYEAYNSIPTGVATTLHFIYPVTVTLLMLII 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVT----WSAYCFARKTIPVGS 192
KE+L + A + L + + + G + + +A ++ Y +
Sbjct: 116 FKEKLGINKAFALIFSFLGMYCLVGGNCAGFDIYGVLLAAGSGLVYAGYIVSAGKCRYSK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + ++ ++ F+ + I F GIK
Sbjct: 176 IDSYITIFYLSILSSVLLFIYGLFTNSLTLNMAFSSYVSIGIISVFCTVVALIAFLEGIK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S I+ P++ I+ + +L + I ++++++++ +
Sbjct: 236 LIGPSNTAILSTLEPIVSIILGIILLNEVISFKIGFGSILILVSVIIVTIEKSK 289
>gi|332880259|ref|ZP_08447937.1| putative membrane protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332681704|gb|EGJ54623.1| putative membrane protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 305
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 99/300 (33%), Gaps = 15/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + A + +G+ PL+ + + V V+ +R +++L + +
Sbjct: 1 MDNKKVKGYAYGVIASVSYGLNPLFALPLYASGIRVDSVLFYRYVFALLFLAVMMKMSGQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L ++ + + + + F + + S F+ PV+ + +
Sbjct: 61 SFALKRNEILPVAVM------GLLFSFSSLFLFQSFNYMDAGIASTILFMYPVLVAVIMA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIP 189
VF KERL+ ++I + + + ++ G LS+ ++ Y
Sbjct: 115 VFFKERLSVVKIASIATAFVGISMLYKGEGGATLSMTGVCLVLMSSLTYALYIVGVNRSS 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ G + + +L Y+V + L + +
Sbjct: 175 LKEMPGLKLTFYAILFGSLVYIVRLRGGMDLQWLTEGTQWMNALGLALFPSLISMVTIAK 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ + I+ PL + V + + + + +++ A+ + ++
Sbjct: 235 AIRNIGATPAAILGALEPLTALFVGVMVFHERLTGGNVVGILLILFAVTLIVVGPRGWLR 294
>gi|327194806|gb|EGE61644.1| putative transporter, permease protein [Rhizobium etli CNPAF512]
Length = 318
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 99/303 (32%), Gaps = 16/303 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ MG +F + + + ++ + + V EV + R + +++
Sbjct: 10 SSPSDVTMGLALMFLSVMFSPLIDIFAKLAVVTVPSAEVTAGRFAVQALCMLPIVIWRRS 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + I+ + F+ L +FV P+I LG
Sbjct: 70 F------DDFSWRQSLFHAIRGLIITISMICFVTTLKYMAVADAIAIFFVEPIIVTILGG 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+FLKE + + A + +++ S + +A+ +A C A +
Sbjct: 124 IFLKETIGWRRYTACGVGFFGAMLIIQPSFNEVGYIALLPILTALCIAIFVLMTRVLSHK 183
Query: 197 FIEMCVLAIPALFYVVWNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ ++ +++ S + ++ G G + +
Sbjct: 184 EDPWAMQFQMGIWGLIFCAVLLFAGDGSGSDIFDPVMPVGNAWFYVAGVGAMAAIAGIFG 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + A ST+ ++Y + + + + D ++ + I++ + + L
Sbjct: 244 VYAYRAAPASTLAPLQYFEIVSATIFAWLVFGDFPDAIKWLGIMIIIASGIYILWRERRF 303
Query: 308 SGK 310
+ K
Sbjct: 304 ASK 306
>gi|315656978|ref|ZP_07909863.1| membrane spanning protein DUF6 [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315492370|gb|EFU81976.1| membrane spanning protein DUF6 [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 321
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 80/287 (27%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ + A WG T + L +V + ++ R +
Sbjct: 1 MKKLIPIFALALACAAWGSTFFMVKDHVLTEVPAADFLTVRFALASVVACLLWF-----R 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K + + + + + V +
Sbjct: 56 ELRTAGWKTLALGFGAGVLHGLGQLSQTWGLNMTTAATSGFITAMSVVLVPFVAMILFRE 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + L ++ A L + +L + G+ L + + A A + +
Sbjct: 116 HFKPITWLWMLLATLGLAALSLRGWSFGLGELITLLGAVFFAAHVASLGVISPGRSAGAL 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ PA+ VV G I + + + ++ R +
Sbjct: 176 AAMQMVGPAVVNVVPALSDGELTLPPNAIVWADLVYMALVCALGTLFVQTWAQARMSSTE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ PL + SV + + + ++++A+V L V
Sbjct: 236 AALIMACEPLFATLFSVVFSGEALTWRLLVGGSLIMVAIVAAQLSGV 282
>gi|260549883|ref|ZP_05824099.1| DMT family permease [Acinetobacter sp. RUH2624]
gi|260407133|gb|EEX00610.1| DMT family permease [Acinetobacter sp. RUH2624]
Length = 300
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 89/293 (30%), Gaps = 1/293 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
E P L + WG +P+ L + + R L + + ++
Sbjct: 6 AEETQSPAFKLYLCIAITVFCWGYSPIGVHSALHSYTPQHIALLRFLIASVFLLLLVMKK 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
KD V +L ++ A+ + + + +F
Sbjct: 66 GIQPLNWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFK 125
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ K+ L L + ++++S L + +A F + +
Sbjct: 126 EKIRFKQWLCILLGLCGAVLVVSGDHGFGVPSPYSLLIVLAAIAWGLYFNLYKKFTLNYD 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ ++ + + ++ E + ++ ++ + ++ Y +K
Sbjct: 186 ALSMMCYIIWFGTIPLLFYSAHLPSEILHATWQANMSVILLGIFPSAMAYVLWGYVLKNM 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
L+ Y +P++ + +V L + + + I+V ++V
Sbjct: 246 PLTIASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRT 298
>gi|239939798|ref|ZP_04691735.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
gi|239986289|ref|ZP_04706953.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
gi|291443229|ref|ZP_06582619.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291346176|gb|EFE73080.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 341
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/281 (11%), Positives = 79/281 (28%), Gaps = 6/281 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + E + +V R+L + A+ L T +
Sbjct: 28 SLIWGFSFLLIKVGTEGYAPFQVTFGRLLAGTAVLVAAMAMRRERLPRSARTWGHLTVAA 87
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L+ + + + + + V L R + L
Sbjct: 88 LLLNALPFSLFSYAELTIPSTLAGICNATSPLWGMVLSVVALSEDRPTRRRVAGLGVGFL 147
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L SG+ L +A+ S + G + L +
Sbjct: 148 GVLTVLGAWQGFSGLDLPGTGMALLASFCYPVGWIYVRRTLAGTGSSTLALTGSQLCLAT 207
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
V +P L L + ++ +T ++ Y P
Sbjct: 208 AQLAVVTPLFTSAPASFPLLPTLSVLALGALGTGLAVLLQYGLVQEVGPTTAQMVTYFIP 267
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ + V +L + + + +V++ + ++
Sbjct: 268 VIATAAGVALLGEQLSWNTPVGALVVLVGAALTQTRPRRSA 308
>gi|218296430|ref|ZP_03497173.1| protein of unknown function DUF6 transmembrane [Thermus aquaticus
Y51MC23]
gi|218243224|gb|EED09755.1| protein of unknown function DUF6 transmembrane [Thermus aquaticus
Y51MC23]
Length = 285
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 88/286 (30%), Gaps = 13/286 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + W + L+ +S ++ R L + +
Sbjct: 4 RALLAALVTILFWASAFAAIRAGLKGLSPGHLVLLRFLVAGSVLLLYARARG------LR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + + V+ ++ LT S PV + L FLKERL
Sbjct: 58 PPRREDLPRLFLLGFLGITVYHVALVFGQLTVSAGAASLLIATGPVFTAVLSYFFLKERL 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVGSSEGFF 197
L ++ L +L L++ G L A ++ F +
Sbjct: 118 RPLGVLGFALALLGSLLIAFGEGGGLAFSPGAFLVLLSALATSIYFVLQKPLFARYGSEA 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I + L + L +++ L + + ++Y + R S
Sbjct: 178 IAVYTLVLGTLPLLLFLPGLPEALLKAPGPALLSALYLGVFPGALAYLTWTYALSRTPAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ Y +P+L I+ + L + + + + ++ +V+ L
Sbjct: 238 RLSSFLYLSPVLAILIAYLWLGEVPSPLSLLGGALALVGVVLVNLR 283
Score = 40.3 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 25/77 (32%)
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ L + +G ++ T P+ V S F LK+ + +
Sbjct: 63 DLPRLFLLGFLGITVYHVALVFGQLTVSAGAASLLIATGPVFTAVLSYFFLKERLRPLGV 122
Query: 288 IVFGIVVIAMVVYLLPT 304
+ F + ++ ++
Sbjct: 123 LGFALALLGSLLIAFGE 139
>gi|190892613|ref|YP_001979155.1| transporter permease [Rhizobium etli CIAT 652]
gi|190697892|gb|ACE91977.1| putative transporter, permease protein [Rhizobium etli CIAT 652]
Length = 318
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 99/303 (32%), Gaps = 16/303 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ MG +F + + + ++ + + V EV + R + +++
Sbjct: 10 SSPSDVTMGLALMFLSVMFSPLIDIFAKLAVVTVPSAEVTAGRFAVQALCMLPIVIWRRS 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + I+ + F+ L +FV P+I LG
Sbjct: 70 F------DDFSWRQSLFHAIRGLIITISMICFVTTLKYMAVADAIAIFFVEPIIVTILGG 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+FLKE + + A + +++ S + +A+ +A C A +
Sbjct: 124 IFLKETIGWRRYTACGVGFFGAMLIIQPSFNEVGYIALLPVLTALCIAIFVLMTRVLSHK 183
Query: 197 FIEMCVLAIPALFYVVWNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ ++ +++ S + ++ G G + +
Sbjct: 184 EDPWAMQFQMGIWGLIFCAVLLFAGDGSGSDIFDPVMPLGNAWFYVAGVGAMAAIAGIFG 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + A ST+ ++Y + + + + D ++ + I++ + + L
Sbjct: 244 VYAYRAAPASTLAPLQYFEIVSATIFAWLVFGDFPDAIKWLGIMIIIASGIYILWRERRF 303
Query: 308 SGK 310
+ K
Sbjct: 304 ASK 306
>gi|152989197|ref|YP_001347285.1| RhaT protein [Pseudomonas aeruginosa PA7]
gi|150964355|gb|ABR86380.1| RhaT protein [Pseudomonas aeruginosa PA7]
Length = 299
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 94/282 (33%), Gaps = 9/282 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +L+G+T ++ + L S ++ R L+++ +
Sbjct: 1 MNRRSALAALHGGALLFGLTGVFGK-LASASPGVIVFGRALFAVVALGLFARLSHQLWRA 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L P L +LA HW F A+ T + + + P +V L + +
Sbjct: 60 L-----GPAQWLRLAGCGLLLAGHWVSFFIAVKTGGVAIATLGFASFPAFTVILEGLVFR 114
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER++ +++ L+ L L+++T L L A+ +S
Sbjct: 115 ERIHFAEVLLVALVSLGLVLVTPRFDLASGATLGLLWAILSGLLFALLSLANRSNSGQIG 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F+ E L + + +F + K
Sbjct: 175 PVQAALWQNLVVALCLLPFAAFELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKAR 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ P+ I + + + + ++++A+V+
Sbjct: 235 SAALVFALEPVYGIAFAWLLFHETPGPRMFLGGALIILAIVL 276
>gi|295091176|emb|CBK77283.1| Predicted permease, DMT superfamily [Clostridium cf.
saccharolyticum K10]
Length = 300
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 91/296 (30%), Gaps = 11/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
T+ G L ILWG + QFL E V + R+L++ +
Sbjct: 2 TQPNTLRGILSALAGGILWGFSGTCGQFLFSFEAVDPSWLTVTRMLFAGIVLLAVSFPGH 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
T K+ + +L+FS L ++ A+ + ++ P + + +
Sbjct: 62 RTAMKGILTEKS-SLIRLLLFSVLGLTTCQLTYLTAISYSNAGTATVLQYLGPALIMVVS 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ + ++ A +L + ++ H LS ++ + +
Sbjct: 121 CFLARRLPSGKEVFAIVLAVSGTFLLATHGKPDSLVISPEGLSWGLSSAVALVLYTMLPG 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G + + ++ + L + F ++
Sbjct: 181 SLIARWGSTVVTGYGMLIGGIFLFFLTGYWNYRISFSPAMVMGVAAIVVLGTALAFTLYL 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ ++ P+ V S L TV + ++V A+++
Sbjct: 241 QGVSDIGSVKASMLACIEPVSATVISALWLHTSFTTVDIVGLALIVTAVLMLSRKG 296
>gi|229018596|ref|ZP_04175451.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1273]
gi|228742701|gb|EEL92846.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1273]
Length = 295
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 96/295 (32%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ +S L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFISPLTLVWLRFIIAFVVLYVILKITEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ L ++I+ G +L A + +
Sbjct: 121 KEKLTTRRLLSTIIATLGVIIVIGWDIEIGSYFIGSIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLIITTYAIFFSLFFITPFMVWEVQTNPIEHMNMYVVLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ S + + P++ + +L + + + I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSILGWLLLNETLSSNFFIGGILIICSVIITTFEKQK 295
>gi|224025847|ref|ZP_03644213.1| hypothetical protein BACCOPRO_02589 [Bacteroides coprophilus DSM
18228]
gi|224019083|gb|EEF77081.1| hypothetical protein BACCOPRO_02589 [Bacteroides coprophilus DSM
18228]
Length = 299
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 94/295 (31%), Gaps = 19/295 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+A L +WG T + T+ L ++ +E+ ++R + +
Sbjct: 9 SARNKETWFHLIAILTVSIWGSTFIATKSLINHGLTPVEIFTYRFSLAYVCLLAVC---- 64
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ T ++++ AL S TPV++V L
Sbjct: 65 ---HRKMLANSWRDEGFFLLAGLTGGSLYFISENSALEITMASNVSLIVCTTPVLTVLLS 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFAR 185
S+F +E+L +I +L+ + + ++ + + L + + + R
Sbjct: 122 SLFFREKLRKGFVIGSLVALSGVALVVFNGSVLLKLNPLGDCLTLVAALSWAFYSLILRR 181
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + Y+ + S L + + +
Sbjct: 182 MGNRYSTLFITRKVFFYGLLTLFLYLPFVSSSFHPDRLGLPAVYINLLFLGIVASMLCYI 241
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ ++ S Y PL+ + +S L +PI + + +++ + +
Sbjct: 242 SWNACVRIIGASRASNYLYINPLVAVWASHVFLSEPITSTALLGAVLILGGVYMV 296
Score = 40.7 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 43/143 (30%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
L +T S + + G +L YV +
Sbjct: 16 WFHLIAILTVSIWGSTFIATKSLINHGLTPVEIFTYRFSLAYVCLLAVCHRKMLANSWRD 75
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ FL+ S F + ++ S V ++ T P+L ++ S ++ + I
Sbjct: 76 EGFFLLAGLTGGSLYFISENSALEITMASNVSLIVCTTPVLTVLLSSLFFREKLRKGFVI 135
Query: 289 VFGIVVIAMVVYLLPTVINSGKN 311
+ + + + + + N
Sbjct: 136 GSLVALSGVALVVFNGSVLLKLN 158
>gi|229185609|ref|ZP_04312788.1| Transporter, drug/metabolite exporter [Bacillus cereus BGSC 6E1]
gi|228597839|gb|EEK55480.1| Transporter, drug/metabolite exporter [Bacillus cereus BGSC 6E1]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 97/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSVYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + F+L + + + I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWFLLNETLSSNFFIGGILIICSVLITTFEK 293
>gi|49478043|ref|YP_037252.1| DMT family permease [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|206974465|ref|ZP_03235381.1| permease, drug/metabolite exporter family [Bacillus cereus
H3081.97]
gi|49329599|gb|AAT60245.1| permease, drug/metabolite exporter family [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|206747108|gb|EDZ58499.1| permease, drug/metabolite exporter family [Bacillus cereus
H3081.97]
Length = 298
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 99/300 (33%), Gaps = 13/300 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + WG + L+ + LE V +++ R + +
Sbjct: 1 MKPIKANLMILLVTMTWGTSYLFMKIGLETVPSFSLVALRFGIAFLVCAAVFFKQFRSIH 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +L V I L T F +T + L V
Sbjct: 61 FVTLKYG--------FILGFLLFVVSASVILGLKTTSASNAGFLASLTVIFIPLLSIVLF 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEG 195
K+RL++ II++L+ + + ++TL++ + L S +A + A+ +
Sbjct: 113 KDRLSYRLIISSLVAMTGIGLLTLNNQLTLNSGDLLCILAALFYAFHIIVTGRAAKVANT 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L F V+ L+ ++F + I + K
Sbjct: 173 LQLGILQLGFAGGFGVLSALIFEEPQLPSTKESWIAVLVLSIFCSAFAYIIQAMAQKYTT 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ G++ P+ + + + + + I +++ +++ + S K+
Sbjct: 233 PTHTGLIFSLEPVFSALFAYLFMNELLSIQGYIGALLILSGVILAEIKVKRKSTFKAKKR 292
>gi|78224643|ref|YP_386390.1| hypothetical protein Gmet_3456 [Geobacter metallireducens GS-15]
gi|78195898|gb|ABB33665.1| protein of unknown function DUF6, transmembrane [Geobacter
metallireducens GS-15]
Length = 346
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 79/282 (28%), Gaps = 4/282 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + L+GI+P+ + + ++S + L S G+ +++
Sbjct: 4 GQFLAVISAALFGISPVLCKLVIGEMSPALLAGLLYLGSGIGLHILLLFQGKKSIEEVKR 63
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L K + +L + V F Y + S + V + + +E +
Sbjct: 64 LSPKKRLALLGSILSGGVVAPLFLAYGIKFGTASEVSLLLNIETVATTLIAWFVFREHVG 123
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIPVGSSEGFFIEMC 201
LI+L + + L + L + A+ + E +
Sbjct: 124 LGVWGGKALILLGSVFVILKNDGSLAFSFAGLLVLLACAFWGIDNNLTRDIEELPATVLA 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L+ + +F ++R +
Sbjct: 184 SIKGFGAGAFNTLLALALSTGTATVPQVAGSLLIGAMSYGMSLVLFVEALRRIGSARTST 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ P + SV IL + + +++ + +
Sbjct: 244 LFAIGPFVGTFLSVLILGERPPATYWVAASLMLAGIALLQRE 285
>gi|46906741|ref|YP_013130.1| hypothetical protein LMOf2365_0525 [Listeria monocytogenes serotype
4b str. F2365]
gi|46880006|gb|AAT03307.1| putative membrane protein [Listeria monocytogenes serotype 4b str.
F2365]
Length = 319
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/311 (13%), Positives = 101/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLIFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
VFL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 VFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + G LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPGGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + FG ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|171780314|ref|ZP_02921218.1| hypothetical protein STRINF_02102 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281662|gb|EDT47097.1| hypothetical protein STRINF_02102 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 318
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/303 (15%), Positives = 107/303 (35%), Gaps = 10/303 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
N + G++ VF A I WG++ + QFL ++V ++IS R+L S +
Sbjct: 15 NNMNKNLKGSIMVFIAGIAWGLSGVCGQFLMSRGMNVSQLISMRLLISGTVLTAIA-ATK 73
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
SL+K VG+L+F+ ++ ++ A+ + +++P++ +F
Sbjct: 74 YRESLVKILRSKGALVGILLFAVLGFLMNQYSYLVAIDYTNAGTATVLQYMSPIVVLFFV 133
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
++ + + +A +L I+ H L + +A
Sbjct: 134 ALKERRIPEINEFLAIFCAVLGTFIIVTHGRLDGLAITPKGLVFGLLSAVTAAFCVVLPA 193
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G F + + + + + L G+ + +F
Sbjct: 194 KYVREYGSFPVIGLGMLMGGAISFFTTQAWQYPLVLNQGNLIGLFGIIGIGTILNYSLFF 253
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G ++ P+ +V +V ++ + I + ++A+++ L +I
Sbjct: 254 MGTAIIGSVKGSLIAAVEPISSVVFTVILMHDVFYPMDFIGMLLTIVAVLLISLRDLITL 313
Query: 309 GKN 311
+
Sbjct: 314 RRR 316
>gi|291548962|emb|CBL25224.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Ruminococcus torques L2-14]
Length = 288
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 83/293 (28%), Gaps = 8/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G F+ + + + + V ++ R L + IV
Sbjct: 2 SSRNKGICFIILSAFSFALMGACVRLAGDVPSIQKSFFRNLVAFFVALIMIV------RS 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+G +V AT + YA+ S ++P + + LK
Sbjct: 56 GDGFEIKKGNLGYMVLRATFGTMGILCNFYAVDHLVLSDASMLNKMSPFFVILFSFLLLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE- 199
E+L Q IA + + L + + + + A + G +
Sbjct: 116 EKLKPAQAIAIFVAFIGSLFIIKPTFTNMELFPSVIGLCGGIGAGIAYAMVRILGQRGQK 175
Query: 200 -MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+ + F + ++ L L+G GL + + A
Sbjct: 176 GSSVVLFFSGFSCIVTLPYLLFNYHPMTGTQMLALLGAGLAAAGGQFGITAAYYHAPAKE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ I +Y+ + + F+ Q D + + I++ K
Sbjct: 236 ISIYDYSQIIFSTILGYFLFGQVPDKYSVLGYVIILAMAAWMFFYNKRPEEKE 288
>gi|269120370|ref|YP_003308547.1| hypothetical protein Sterm_1758 [Sebaldella termitidis ATCC 33386]
gi|268614248|gb|ACZ08616.1| protein of unknown function DUF6 transmembrane [Sebaldella
termitidis ATCC 33386]
Length = 306
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 91/293 (31%), Gaps = 20/293 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G LF A ++WG T T+ L+ + +E++ R + +F
Sbjct: 3 TKNEISGHLFALTAILVWGTTFTSTKILLKSFAPVEILFFRFIIGFTVLFIL-------S 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-SV 137
+ + + + +++ ALL ++P + L
Sbjct: 56 PRKISVKNMRQELILAAAGFCGITMYFLMENIALLHTTASNAGVIVSLSPFFTGILSFYF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----------WSAYCFARK 186
E+L+ I ++ + + +++ + + L I +S
Sbjct: 116 SDDEKLDVSFFIGFVIALTGIGLISFNGMMNLNLNPIGDFLALLAAFFWSLYSILMKKVS 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ E + ++ + F F + L ++ F
Sbjct: 176 KFGYSNLESTKRVFFYGLFFMIPAILISDFKWEFIRFADPVNLFNILFLGAGASALCFAA 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + + Y P++ ++S+ +L + + + I +++
Sbjct: 236 WNTAVNILGAVKTSVYIYIVPIVTVLSAALVLGEKLTIISVCGVIITFAGLLI 288
>gi|194442364|ref|YP_002042238.1| RarD protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194401027|gb|ACF61249.1| RarD protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 304
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
GT+FV A+ILWG+TPLY Q+L ++ +++ +RV WS+P + + F + D
Sbjct: 6 RNGTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLVVRLLFRQ-RTRFHD 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ K+ + + ++ V W FIYAL S YF+ P+ + LG +FLKE+L
Sbjct: 65 AWKDKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKL 124
Query: 144 NHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ Q IA + L + P L+L + ++++ Y ARK I IE
Sbjct: 125 SLFQAIAVFSGVCGLTFQIIMLRHFPALALTMGLSFALYGLARKFIHYDVMTSITIETLW 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+L +++ + + +F+ + L G+
Sbjct: 185 ALPVSLLIFLFSDSGPIISANTP----FFLYVMTAPVTIIPLVLFAIALNHTSLIVTGLA 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y P L + ++ I + I+ + F V + + + + + K
Sbjct: 241 QYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLYSHYLRARLK 293
>gi|92112310|ref|YP_572238.1| hypothetical protein Csal_0175 [Chromohalobacter salexigens DSM
3043]
gi|91795400|gb|ABE57539.1| protein of unknown function DUF6, transmembrane [Chromohalobacter
salexigens DSM 3043]
Length = 281
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 7/284 (2%)
Query: 30 VFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + + +++L +++I R L SLP + + G L
Sbjct: 1 MCAGVLCLALGDAVSKWLGATYEPIQIIFFRTLISLPLIALLARFNGGWRKLKTR----- 55
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
G+ + I A F+ L + F P+ L LKER+ L
Sbjct: 56 -RPGVHLLRGMIFAGTMFCFVTGLTLLPLAEATAIAFAAPLFVTLLSGPLLKERVERLPF 114
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
IA+L+ +L++ A+ V +A C+A I G ++ L
Sbjct: 115 IASLVGFAGVLVVVRPGAAGFQWGALIVVGAAVCYALMMITARRYGGKESLWAMVFYATL 174
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
++ + + + L IG G+ + + A + +YTA +
Sbjct: 175 VPLILSALLLPSVWKMPEGLAWLGFIGSGIFGVGAVSCITLAFRYAPAALAAPFDYTAMV 234
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ ++ + D + +++ + V L + K +
Sbjct: 235 WAVLLGWWLWDEVPDVWVFVGAAVIIGSGVAIALYERRVAIKAR 278
>gi|302185616|ref|ZP_07262289.1| hypothetical protein Psyrps6_04703 [Pseudomonas syringae pv.
syringae 642]
Length = 295
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 83/287 (28%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F+ A L+ +++L + ++ + ++ +
Sbjct: 12 NKPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVW-----ARYLVHTLLMACIFMPS 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K G+ V A L F +L+ + F+ P++ L L
Sbjct: 67 SGLRVLRTKRPGLQVLRALALLGTSLLFTSSLMFIPQAEATAVNFLAPLLVTALSVPLLH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q IA ++ + ++I+ G + SA CFA + F
Sbjct: 127 ERVTRGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSPT 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LF + + + + FL+ G + + + A + +
Sbjct: 187 TSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAMLA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + I+ ++ +
Sbjct: 247 PFSYCQIVFAGLLGFLFFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|284172750|ref|YP_003406132.1| protein of unknown function DUF6 transmembrane [Haloterrigena
turkmenica DSM 5511]
gi|284017510|gb|ADB63459.1| protein of unknown function DUF6 transmembrane [Haloterrigena
turkmenica DSM 5511]
Length = 335
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/288 (10%), Positives = 78/288 (27%), Gaps = 13/288 (4%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + LE + L + R+ + ++
Sbjct: 14 AFVWGTAFTAIEIGLETLPPLLFAAARLDIAALIFAGVVLLSRNQWLPRTRADMALILSN 73
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
++ A + I G F + + + ER+ +I
Sbjct: 74 GILVIGAQFAFAF---IGQSYVTSGVAAIIISFTPIITPIIAIRLLPTERIYVTDVIGLC 130
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---------KTIPVGSSEGFFIEMCVL 203
+ ++ + + G L A T + + + M
Sbjct: 131 AGLAGVIAIAIAGGSFDGQLLGVGLLLAAAVVFALGSVLTERWTAALPTMSLYAWSMGTG 190
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AI + + + F ++ + R ++V ++
Sbjct: 191 AIFLHVTAYAYSGASFRDVAWTPSAAAALVYLGIFATAGGFLLYFTLLNRIGATSVSLIN 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
Y +P++ + +L + I + F ++V+ + + + ++
Sbjct: 251 YASPVVAAIFGAALLGEQITVATVVGFALIVVGFALCNIRPLWRLLRS 298
>gi|213970529|ref|ZP_03398656.1| hypothetical protein PSPTOT1_4007 [Pseudomonas syringae pv. tomato
T1]
gi|301384140|ref|ZP_07232558.1| hypothetical protein PsyrptM_15961 [Pseudomonas syringae pv. tomato
Max13]
gi|302064019|ref|ZP_07255560.1| hypothetical protein PsyrptK_28895 [Pseudomonas syringae pv. tomato
K40]
gi|302132677|ref|ZP_07258667.1| hypothetical protein PsyrptN_14860 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213924700|gb|EEB58268.1| hypothetical protein PSPTOT1_4007 [Pseudomonas syringae pv. tomato
T1]
gi|331016174|gb|EGH96230.1| hypothetical protein PLA106_09212 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 295
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 79/288 (27%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLS 79
+ G F+ A L+ +++L + ++ R L + + +G
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYLVHTLLMACIFMPSAGLRV 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + ++L FI + + L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATAVNFLAPL------LVTALSVPLL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ Q IA ++ + ++I+ G + SA CFA + F
Sbjct: 126 HERVTRGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSP 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + + + + FL+ G + + + A + +
Sbjct: 186 TTSNFFAGLFNTLVMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAML 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 246 APFSYCQIVFAGLLGFLVFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|54297827|ref|YP_124196.1| hypothetical protein lpp1879 [Legionella pneumophila str. Paris]
gi|53751612|emb|CAH13031.1| hypothetical protein lpp1879 [Legionella pneumophila str. Paris]
Length = 304
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/301 (10%), Positives = 86/301 (28%), Gaps = 10/301 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G+ + + L+G + +S ++ R L S + ++
Sbjct: 1 MNSQEQRGSFYAILSGFLYGFIGYFGISAIHGDLSASNMLFWRFLISSIFILIVLI---- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + YA L L+ +F PVI +
Sbjct: 57 -PQLKNINDTYKSMFTAFLSGVLYYGLSTLLYFYASLYIGSGLSMVIFFTYPVIIMVFNY 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSS 193
F + + + +A +I++ + ++ + I I + Y +
Sbjct: 116 FFYSQTIPKIYYLAISVILIGMALLIDVNEIAFDLWGIFLGLASAFFYACYIVSSKNNEI 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V ++ + + + +K
Sbjct: 176 SPNVSTLMVCLGCMTTSLIVACLDQTFKVPTSFPVWLNLFGIGLVATVIPILLMLHSLKY 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I+ P+ +++ V +L + + + +V+ ++ L IN + K
Sbjct: 236 ISSEKASILSVLEPVFVVIFGVVLLGEELKPWHALGIVLVLAGALITLFSHRINLNQLKQ 295
Query: 314 K 314
+
Sbjct: 296 Q 296
>gi|226945039|ref|YP_002800112.1| hypothetical protein Avin_29710 [Azotobacter vinelandii DJ]
gi|226719966|gb|ACO79137.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 310
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 76/290 (26%), Gaps = 17/290 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A + W + + L + + + R W++ + +
Sbjct: 9 YLLLTLASLFWSGNMVMGRGLRGDLPPVGLAFWR--WTIAFLLVLPLALPHLRKQWPA-- 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ + + F AL PV ++ L + +RL+
Sbjct: 65 LRAGWRPLLLLGVLGVGCYNTFSYIALQYTTATSAILLNSFIPVATIALAFLLFGKRLSR 124
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + ++ + L + + G + A+ +
Sbjct: 125 QEALGVIVSLAGALTLVVQGSLDRLLALSLNVGDLWMLAAVLSWGLYTVGLQWRPQGVHP 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + A + G L L + F ++ G+
Sbjct: 185 MLLLAACIAVGLVAQVPAYAWEVAEGRSIVLNVQSVGGILYAGVVAAFLGFLCYNAGVAA 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + + P+ + S +L + +V + + +
Sbjct: 245 IGPARGSLFIHLMPVFGTILSALLLGERPHLYHLAGIALVFAGIALTMRR 294
>gi|227544614|ref|ZP_03974663.1| DMT family permease [Lactobacillus reuteri CF48-3A]
gi|300910256|ref|ZP_07127716.1| drug/metabolite exporter family transporter [Lactobacillus reuteri
SD2112]
gi|227185397|gb|EEI65468.1| DMT family permease [Lactobacillus reuteri CF48-3A]
gi|300892904|gb|EFK86264.1| drug/metabolite exporter family transporter [Lactobacillus reuteri
SD2112]
Length = 305
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 11/303 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIV 72
E +S M G ++ A +WGI+ Q + Q + ++S R + + V
Sbjct: 1 MEKSSSQVMKGIIWAAVASAMWGISGTVLQLISQNLAIPATWMLSMRTFSAGVILLVISV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + A+ ++ ++ L + F YA+ T + +++P+ V
Sbjct: 61 FLYG-KKIFNVFKTRATAISVISYAILGLMANLLTFYYAIQTGNASAATILQYLSPLFIV 119
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFAR 185
G +F+ R IIA ++ ++ + + L + +A +
Sbjct: 120 LGGIIFMHRRPFRSDIIAFVVALIGVALCITRGNLTQLALPFVSLLWGLGSGITAAFYVV 179
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + A + F
Sbjct: 180 LPQRAADENPPIVVLGWGTMIAGVLFNLYRPFWVNPPHITTTLVASVATVVLFGTILPFG 239
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
I + + A V IM+ P+ + SV K ++ + +V+IA+ +
Sbjct: 240 ILLHATRYAPSDVVSIMDAVQPITTSILSVIFFKLNLNWAEILGIILVIIAVYILQNGRR 299
Query: 306 INS 308
+
Sbjct: 300 KRT 302
>gi|198275677|ref|ZP_03208208.1| hypothetical protein BACPLE_01849 [Bacteroides plebeius DSM 17135]
gi|198271306|gb|EDY95576.1| hypothetical protein BACPLE_01849 [Bacteroides plebeius DSM 17135]
Length = 305
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 94/297 (31%), Gaps = 15/297 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL--EVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ G + + +G+ PL+T L Q ++ ++ +R L++ + +
Sbjct: 1 MNSLKGFFYGIATSVTFGLIPLFTLPLMQKGMMFDSILFYRFLFATFALGAMMKVKKESF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + M + + F + + + +F PV L V
Sbjct: 61 RIESRDI------PMFLLLGLLYTGSAMFLFWGYGFMGAGVATTLHFTYPVFVTLLMLVL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVG 191
+E+ + + +A LL I + ++L AV ++ Y A +
Sbjct: 115 FREKASWVTWVAILLAIYGVSELSLKGDELSADATGVVIVLLSAVCYAGYIVAVNKSRLR 174
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + V + + + + + G + + + +
Sbjct: 175 DMSGRKLAFYVFIVSTVLFAIKALTNQGIQPVPDAVSIGNLFLLAVVPTVISNITLVLAV 234
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + ++ P+ + I + ++++A+ + +L I
Sbjct: 235 QNIGGTMTSVLGAMEPVTAVCIGALIFGEEFTMQEGWGIFLILVAVTLIVLTRTIQK 291
>gi|160891191|ref|ZP_02072194.1| hypothetical protein BACUNI_03638 [Bacteroides uniformis ATCC 8492]
gi|156859412|gb|EDO52843.1| hypothetical protein BACUNI_03638 [Bacteroides uniformis ATCC 8492]
Length = 303
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 97/298 (32%), Gaps = 18/298 (6%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G LF A ILWG+ + L + S L V + R++ + + ++
Sbjct: 3 KNIQGHLFALTANILWGLMAPIGKSALVEFSALSVTTFRMVGAAACFWLLSLFCKREQVD 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+D LK + + L + G +I+ L S P++++ + +++LK
Sbjct: 63 HRDMLK------IFFAALFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTMIVAAIYLK 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTIP 189
E + + +++ + + I+ + S G L LA +
Sbjct: 117 EPVTNKKVLGIFVGAMGAFILIMSSQTTGAGNGSLIGDLLCLLAQISFSIYLTVFKGLSQ 176
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S M V A ++ + + + + +
Sbjct: 177 KYSPITLNKWMFVYASMCYIPFSYHDVAAIQWSEISTAALLQVGYVVVGGSFLAYIFIMS 236
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ ++ + + + I +V + + +
Sbjct: 237 AQRLLRPTVVSMYNYMQPIVASTVAIILGLGVFNLEKGIAIALVFLGVYIVTQSKSRK 294
>gi|73998339|ref|XP_543936.2| PREDICTED: similar to transmembrane protein 20 [Canis familiaris]
Length = 450
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/290 (10%), Positives = 79/290 (27%), Gaps = 24/290 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + L+ + L+ + ++ V +E+ + R ++ + V ++Y G
Sbjct: 153 LGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGF------ 206
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ L + + YA + F TPV + +FLKE+ +
Sbjct: 207 IGPKGQRIFLFLRGVLGSTAMILLYYAFQATSLADATVITFSTPVFTSIFAWIFLKEKYS 266
Query: 145 HLQIIAALLIILSLLIMT-----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + I ++++ +G S + + +
Sbjct: 267 PWDALFTVFTITGVILIVRPPFLFGAGASAASGDGDYSVHLKGTVAAVAHAVFAALTLVI 326
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK---- 255
+ + +++ + + L + G+
Sbjct: 327 LRRMGKSVDYFLSIWYYVILGLLECVVVLFILGEWSLPYCGLDRLFLILIGLFGLGGQVF 386
Query: 256 ---------LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
V IM+ + + + V+ +
Sbjct: 387 LAKAIQIEKAGPVAIMKTMDVVFAFILQIIFFNDVPTWWTVGGALCVIAS 436
Score = 43.7 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 40/110 (36%)
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+E+ VV + F+G +FL G+L S + Y + L
Sbjct: 180 AVEISAFRCVFQMLVVIPCLIYRKTGFIGPKGQRIFLFLRGVLGSTAMILLYYAFQATSL 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ ++ P+ + + LK+ + + +++ + P +
Sbjct: 240 ADATVITFSTPVFTSIFAWIFLKEKYSPWDALFTVFTITGVILIVRPPFL 289
>gi|320158583|ref|YP_004190961.1| permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus MO6-24/O]
gi|319933895|gb|ADV88758.1| permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus MO6-24/O]
Length = 283
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 90/291 (30%), Gaps = 16/291 (5%)
Query: 30 VFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + + + +++ + + E+++ R L SL + + K
Sbjct: 1 MILSALGFALMSASVKYVSVHGIPLFEIVAARALVSLIISYLDV--------KRKGISVW 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
L + + YA+ + +V PV + L +FLKER+
Sbjct: 53 GNNKRWLFARGAVGTLALMCVYYAVTALPLAEATILQYVHPVFTALLAVLFLKERVQPAT 112
Query: 148 IIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ L +L + M S G + A+ + + V
Sbjct: 113 LVCITLCLLGVFTMVYPSFNASGVGELPMLSVGIALLGAFGSSIAYVIVRKLSRTEDSSV 172
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ L + + G+ F + +I L LI G+ + ++
Sbjct: 173 IIFYFPLVALPVSAMLIGDDFVMPDITLILILILVGIFTQVGQFGLTKAMQTQTAGNASA 232
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
Y + + V + + + ++V ++ + N+
Sbjct: 233 YSYVQIVFSALLGVVLFNEVPSIWTLLGGSLIVTGALINVFGPKSKWLANR 283
>gi|258622541|ref|ZP_05717563.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585241|gb|EEW09968.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 351
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 83/287 (28%), Gaps = 13/287 (4%)
Query: 31 FCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
F ++WG + + + + +R ++ + + ++ K
Sbjct: 59 FLLVLIWGGNSIVNKLAASTIEPSAMSFYRWFVAMLILTPFCL----PSTIRKWPTVKRY 114
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ + + ++ YA LT S P++SVF+ L + ++ L ++
Sbjct: 115 LSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISALSVV 174
Query: 150 AALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+L + L M + + Y + +
Sbjct: 175 GGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSNWTLI 234
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +++ + +H +L + ++ I + +
Sbjct: 235 YLQGVCAVFMLTPLWLTSDHLLPTEGSISLIAYAGIAASLLAPWMWVKAIDAIGADSTAM 294
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+ + + +L + + I +V+ + + L +
Sbjct: 295 FMNLLPVFSVSLAATLLGETVHPYHLIGGLLVISGVALSQLKLPRRN 341
Score = 36.0 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 13/133 (9%), Positives = 36/133 (27%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+ V + + E + + L + S + +
Sbjct: 58 YFLLVLIWGGNSIVNKLAASTIEPSAMSFYRWFVAMLILTPFCLPSTIRKWPTVKRYLSK 117
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
L + Y + + ++ PL+ + S+ +L +PI + +
Sbjct: 118 LAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISALSVVGGV 177
Query: 292 IVVIAMVVYLLPT 304
+ + + L
Sbjct: 178 LSLSGLAYMLGEG 190
>gi|237739519|ref|ZP_04570000.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229423127|gb|EEO38174.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
Length = 301
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 94/295 (31%), Gaps = 11/295 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L F LWGI + +L + V+ +I +R++ + + +Y+ G +
Sbjct: 8 GMLSTFVGGTLWGINGVMGNYLFLNKNVTTPWLIPYRLILAG-FLLLGYLYYKKGSKIFD 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V +++F + + A+ + + + P + + + K +
Sbjct: 67 ILKNPKDLVQIVLFGFIGMLGTQYTYFSAIQFSNAAIATVLTYFGPTLVLIYMCLREKRK 126
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+I++ L + ++ H L I S + + + G
Sbjct: 127 PLKYEIVSICLSSFGVFLLATHGDITSLQISFKALVWGILSALSVVFYTVQPESLLKKYG 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + ++ + + I + ++ F ++ G+
Sbjct: 187 ASIVVAWGMMIGGIFIAFVTKPWNINVTFDFITFLVLMLIIVFGTIIAFILYLTGVNIIG 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ P+ + ++ L D + I F ++ + + K
Sbjct: 247 PTKASIIACIEPVAATICAILFLGVTFDFLDVIGFLCIISTIFIVAYFDKKAKKK 301
>gi|260589316|ref|ZP_05855229.1| integral membrane domain protein [Blautia hansenii DSM 20583]
gi|260540397|gb|EEX20966.1| integral membrane domain protein [Blautia hansenii DSM 20583]
Length = 305
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 85/292 (29%), Gaps = 9/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G ++ + + + ++ + + ++ R + + ++
Sbjct: 20 KKQYKGIFYIILSAFCFSLMDMFVRMSGDLPSIQKSFFRNIVAAVFGCILVLKEKDSFQW 79
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + K + + YA+ S ++P V +FLK
Sbjct: 80 KKGSGKYLILRSL------FGTLGILCNFYAIDHLALADASMLNKMSPFFVVIFSFLFLK 133
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ QI+ + L + + L + + A + G
Sbjct: 134 EKVTAAQILLVMGAFGGSLFVVKPTVSNLDLIPSLIGLLGGLGAGAAYTMVRKLGTVGIK 193
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI--GYGLLNSFVFCIFSYGIKRAKLST 258
+ F + L+ GL + + A S
Sbjct: 194 GPFIVFFFSTFSCVITLPWLIFDYHAMTLWQVLVLLLAGLCAAGGQFAITAAYCYAPASE 253
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV-VIAMVVYLLPTVINSG 309
+ I +YT + +V + +Q D + + I+ ++A++++ +
Sbjct: 254 ISIYDYTKVIFSMVLGFVMFQQIPDFYSWVGYVIICLMAVLMFFYNKKRGAR 305
>gi|330888283|gb|EGH20944.1| hypothetical protein PSYMO_05333 [Pseudomonas syringae pv. mori
str. 301020]
Length = 295
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 83/287 (28%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F+ A L+ +++L + ++ + I S GL +
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYVVHTLLMACIFMPSAGLRV 71
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +A+ L T L F+ P++ L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATA-----VNFLAPLLVTALSVPLLH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A ++ + ++I+ G + SA CFA + F
Sbjct: 127 ERVTRGQWVAVVVGFIGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSPT 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LF + + + + D FL+ G + + + A + +
Sbjct: 187 TSNFFAGLFNTLLMSVLVPFFWEVPALKDLPFLLALGACGMSAHLLLTQAFRFAAPAMLA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 247 PFSYCQIVFAGLLGFVVFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|319944356|ref|ZP_08018630.1| drug/metabolite exporter [Lautropia mirabilis ATCC 51599]
gi|319742317|gb|EFV94730.1| drug/metabolite exporter [Lautropia mirabilis ATCC 51599]
Length = 326
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/320 (10%), Positives = 86/320 (26%), Gaps = 33/320 (10%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV-----Y 73
P +G + +L+ + + VS + R++W+ P +
Sbjct: 7 KPEHLGLFYGLLGSMLFACKGILIKLAYRHGVSTETFLGLRMMWAAPFFAWVAWRSDGAA 66
Query: 74 FSGGL----------------SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
++ + + + L
Sbjct: 67 LRRRWHRQAPAGATGLSDDATPRADSVWRSGDVWRVAGLGFSGYYLASYLDFLGLQYVSA 126
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI--- 174
L ++ P + L +LK ++ Q A + L ++++ LH L + +
Sbjct: 127 GLERVLLYLGPTFVLLLSVFWLKRPVSRTQWTALGVSYLGVILVYLHDLDGSLQVNVPLG 186
Query: 175 -------AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
+++S Y + L L GG+ F
Sbjct: 187 SALVLGSCLSYSFYLVGAGEMVRRLGPMRLTAWASLVACVLCVTQALLVGGGDLFRQPIE 246
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ L+ F + + + + P+ I +L +P ++
Sbjct: 247 VQGIALMTAIFCTVFPLFLTTASVNHLGAGKAAQVGMIGPVWTIFLGAVVLGEPTGGLQI 306
Query: 288 IVFGIVVIAMVVYLLPTVIN 307
+ +V++ +++
Sbjct: 307 VGTAVVILGVLILSRAATRR 326
>gi|260912304|ref|ZP_05918855.1| integral membrane protein domain protein [Prevotella sp. oral taxon
472 str. F0295]
gi|260633605|gb|EEX51744.1| integral membrane protein domain protein [Prevotella sp. oral taxon
472 str. F0295]
Length = 307
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 94/307 (30%), Gaps = 14/307 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWS-LPGVFFA 70
+SK + ++ + F +WG T + T+ L +S + + R + + L + FA
Sbjct: 1 MSKHITAQANLLHHIVAFITVAIWGSTFISTKLLIYAGLSPAHIFTLRFIIAYLLMLAFA 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
++ + M++ T + + AL S P+
Sbjct: 61 VLGPRRAGGRKLLSDSLADEGCMMLLGITGGSAFFLMQNEALRFSTATNVSLIVCSCPLF 120
Query: 131 SVFLGSVFLKER-----------LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS 179
++ L + ++ + + + +L +L ++ LS +A +
Sbjct: 121 TMVLMRLLVRGTRLGALQVAGTLFSFVGMATVVLNGKFVLHLSPLGDFLALSACLAWAFY 180
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
+ R S + L Y + H L L
Sbjct: 181 SIIIKRMNERYDSLFITRKVFFYGLLTMLPYYILVPEMPPLHALTRLDVIGHLLFLGVLG 240
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ F +++ + + Y P+ IV + +L + I + +++ + +
Sbjct: 241 SMICFLTWTWVMGKLGAMRATNYIYVNPITTIVFAWLVLHETITPYFIVGTVFILVGLFL 300
Query: 300 YLLPTVI 306
Sbjct: 301 SSKSKTR 307
>gi|237801050|ref|ZP_04589511.1| hypothetical protein POR16_19645 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331023907|gb|EGI03964.1| hypothetical protein POR16_19645 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 295
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 79/288 (27%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLS 79
+ G F+ A L+ +++L + ++ R L + + +G
Sbjct: 12 NRPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYLVHTLLMACIFMPSAGFRV 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + ++L FI + + L L
Sbjct: 72 LRTKRPGMQALRALALLGTSLLFTSSLMFIPQAEATAVNFLAPL------LVTALSVPLL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ Q IA ++ + ++I+ G + SA CFA + F
Sbjct: 126 HERVTRGQWIAVVVGFVGVMIIIHPGGELFTLAILLPLSSALCFALYQLLTRLVSPFDSP 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + + + + FL+ G + + + A + +
Sbjct: 186 TTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAML 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 246 APFSYCQIVFAGLLGYLVFDHTPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|148379313|ref|YP_001253854.1| putative transporter [Clostridium botulinum A str. ATCC 3502]
gi|148288797|emb|CAL82881.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
Length = 394
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/306 (11%), Positives = 90/306 (29%), Gaps = 13/306 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + V A + WG + T+ L + S+P +F+ I F SL
Sbjct: 74 NDKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFRRDPSL 133
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K K + LL L + + + + V + K
Sbjct: 134 FKVDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALALATMFLYTSQIWVVTISYFMFK 193
Query: 141 ERLNHLQIIAALLIILSLLIM-------TLHSGIPLLSLAIAVTWSAYCFAR------KT 187
E+ + I+ LLI++ +M + + + + ++ +
Sbjct: 194 EKFTTQKAISMLLILIGCFMMCEMHKLGSFNLSTKGIFWGLISGFTFALQILLAKVSNEK 253
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ AI ++ + + +
Sbjct: 254 YHYNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFKNSNNLFFLFKNIFWSVVGTLIANTAY 313
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + S ++ ++ V + Q ++ V+ + ++++++++ + +
Sbjct: 314 VKSVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKKSVF 373
Query: 308 SGKNKT 313
K
Sbjct: 374 LKLFKK 379
>gi|85707177|ref|ZP_01038264.1| membrane protein, putative [Roseovarius sp. 217]
gi|85668336|gb|EAQ23210.1| membrane protein, putative [Roseovarius sp. 217]
Length = 301
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 95/294 (32%), Gaps = 7/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + G VF A ++W L + +++ V +++ +R + ++ I +G
Sbjct: 6 TRSERDLRGYALVFLAGLVWSTVGLGIRLIDEAQVWQILFYRSVSMTLLLYGVIRLRTGQ 65
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L V L + I+A+ T + +P+++ LG V
Sbjct: 66 DPLRLAWRMGWP----GVIGGLSLVAAYTGAIFAIQTTSVANAMMLFACSPLLAAVLGRV 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L E + +A L+ + +M L +LA + + T+ G +
Sbjct: 122 ILGEYVRPQTWVAILVAGCGIAVMVWDKFAGAALLGNLAAIGSAVGFATFTITLRWGKAT 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + + G + + L +++ G K
Sbjct: 182 EMMPAVFLSGVFGMVLMAIICLWLGLSLGITPGDMGISLGMGVFQVGLGLILYTIGSKTV 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + ++ +L V +L + I I++ A+ L
Sbjct: 242 PAAELTLLSLAEVVLGPVWVWLVLGETATPNTLIGGTILLTAIAGNALSGARRR 295
>gi|296271974|ref|YP_003654605.1| hypothetical protein Arnit_0434 [Arcobacter nitrofigilis DSM 7299]
gi|296096149|gb|ADG92099.1| protein of unknown function DUF6 transmembrane [Arcobacter
nitrofigilis DSM 7299]
Length = 297
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/290 (10%), Positives = 83/290 (28%), Gaps = 18/290 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+++ A + W + +++ +S +E+ R W + + L+
Sbjct: 4 YIYLVLAVLFWSGNVVVGRYVSTDISPMELSFFR--WFFVVLILSPYTIKNRKRLISIFK 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+NP + ++ + F + T P+ + L S+ + ++
Sbjct: 62 QNPLLYLLCGTLG--ISAYNTFIYLGVEHLTATNTLLINSSIPIFIIILSSILINTKITK 119
Query: 146 LQIIAALLIILSLLIMTLHSGI-------------PLLSLAIAVTWSAYCFARKTIPVGS 192
LQ L + ++ + L ++ I + K +
Sbjct: 120 LQGFGIFLSTIGVIYLLLKGEYEALMKLEFTRYDLWIILACITWAIYSIYLKFKPKDIKP 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E I + + V GF F + + + F ++
Sbjct: 180 LEFLSIITFIGVVILFLVCVIFGFKFEYGFLHDDKLLFTLMYVSIFPSVLSFYFWNSATY 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ G + P+ + + L + + + + + + +
Sbjct: 240 EVGATKAGQFIHLMPVFGFILAYIFLNESLHPYHIVGIAFIATGIYLSIF 289
>gi|52079517|ref|YP_078308.1| putative membrane protein, transporter [Bacillus licheniformis ATCC
14580]
gi|52784882|ref|YP_090711.1| YdeD [Bacillus licheniformis ATCC 14580]
gi|52002728|gb|AAU22670.1| putative membrane protein, transporter [Bacillus licheniformis ATCC
14580]
gi|52347384|gb|AAU40018.1| YdeD [Bacillus licheniformis ATCC 14580]
Length = 309
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 89/301 (29%), Gaps = 11/301 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G L V LWG++ QF+ ++S R+L S + + +
Sbjct: 1 MKSAHVKGVLMVLAGASLWGLSGSAAQFVFERGAADAGSLVSVRLLASGVILLLYVSMKN 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + + K +LVFS + F ++ + ++ P +F
Sbjct: 61 GFQHVCQIWKKKTDICSILVFSIFGMLAVQYTFFASIEKGNAAAAAILQYLAPFFVLFYL 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKT 187
V + + LL + + ++ + ++ A+
Sbjct: 121 YVKKELPPKWKDAVLTLLALSGVFLLLTGGRPDSLYIPAEAAVWGVLSGGALAFYTVFAG 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S + + + + +G L + F ++
Sbjct: 181 GLIQSFGALTVTGWGMLVGGAGFSFLFPPFRFNLSHIGAGEAAAILFVVLCGTALAFALY 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + PL ++SS L P + + +V+I +++ L
Sbjct: 241 IGSLSYLSAKETSCLSCAEPLAAVLSSALWLGVPFNAFQGAGTVMVIITVIILSLSRERK 300
Query: 308 S 308
+
Sbjct: 301 A 301
>gi|134292425|ref|YP_001116161.1| transporter DMT superfamily protein [Burkholderia vietnamiensis G4]
gi|134135582|gb|ABO56696.1| RarD protein, DMT superfamily transporter [Burkholderia
vietnamiensis G4]
Length = 299
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/290 (20%), Positives = 125/290 (43%), Gaps = 8/290 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G A L+ + +Y + L ++ L++ + R+LW+ PG I +L+
Sbjct: 9 RGIALSVTASTLFALMSVYAKLLAPLTGLDIFAWRILWTAPGALALIALRGRWPALVELA 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++++ + + L SA +L V F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSVRDWRLLIALPVSAALLGVQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ LQ A L + + +L +A+ + Y R+ I S F +E+
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFALEI 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L AL V + G H + L G G+L++ + + ++ G
Sbjct: 189 ALLCPVALAMVSASATPVGRH----PLVWAALLPGLGVLSTLALASYLKASRMLPMALFG 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ Y P+L++ S+ +L + ++ + + + A+ + + + +
Sbjct: 245 ILGYVEPVLLVAVSLLLLGETLNASQLATYAPIWAAVALTAWHSAMLMRR 294
>gi|310826412|ref|YP_003958769.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
gi|308738146|gb|ADO35806.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
Length = 304
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 80/276 (28%), Gaps = 13/276 (4%)
Query: 29 FVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+F A I+WG + + + + ++ R + K L +
Sbjct: 14 ALFGAAIIWGSSFFVVKNTVDIFTPHMLLGFRFTIGCILLAVIF--------RKKLKLLD 65
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
L + + +F + +I FL K + +
Sbjct: 66 KGYFISGAVIGFCLFAAYSLQTIGITDTTPGKNAFLTAIYCIIVPFLFWAVDKSKPDIYN 125
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+AA++ I+ + +++L G + + A + I +
Sbjct: 126 YLAAIICIVGIGLVSLTEGFTIGFGDAFTLLGGLCFAAHMVAVAKLGRDRDPILITILQF 185
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+F + + L + + + G K S I+
Sbjct: 186 GYAAIFAWIVGFATESLPAVWTFDSVLGLLFLAFFATAVALLLQNVGQKYTHPSAAAIIL 245
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ SV + + I F ++ IA++V
Sbjct: 246 SLESVFGVLFSVIFYGEALTPKLIIGFVLIFIAIIV 281
>gi|241663956|ref|YP_002982316.1| hypothetical protein Rpic12D_2371 [Ralstonia pickettii 12D]
gi|240865983|gb|ACS63644.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii
12D]
Length = 310
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/284 (9%), Positives = 80/284 (28%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + LWG + L+ + + +I+ RV + + + G +L
Sbjct: 6 VLELLTLAALWGGSFLFMRVAALPFGPVALIALRVAIASCFLVPTLALRGGMGALRTHWP 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + LT TS P+ + + +L ER++
Sbjct: 66 HLLAVGVLNSAIPFCLFAYAE------LTLTAGFTSVLNAAAPLFAAIVAFTWLGERMSS 119
Query: 146 LQIIAALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+++ + + ++++ G+ + + A + +
Sbjct: 120 LRVLGLAIGFVGVIVLVGGSSVIDAKQGGVAVAAALSATVLYGVASSYTKRFLTGVPPLA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + +F + +
Sbjct: 180 VATGSQVAATIVLAPLAYWLWP-AQTPTGSVWLHVIALGIACTGVAYILFFRLVAHVGPT 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + P+ ++ + L + + I ++++ +
Sbjct: 239 RAVSVTFLIPVFGVLWGILFLGEQLTLNMVIGCAVILLGTSLST 282
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 46/138 (33%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + + + + V + + + L + + + L
Sbjct: 9 LLTLAALWGGSFLFMRVAALPFGPVALIALRVAIASCFLVPTLALRGGMGALRTHWPHLL 68
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
L ++ FC+F+Y ++ APL + + L + + ++R + I
Sbjct: 69 AVGVLNSAIPFCLFAYAELTLTAGFTSVLNAAAPLFAAIVAFTWLGERMSSLRVLGLAIG 128
Query: 294 VIAMVVYLLPTVINSGKN 311
+ ++V + + + K
Sbjct: 129 FVGVIVLVGGSSVIDAKQ 146
>gi|89100247|ref|ZP_01173113.1| hypothetical protein B14911_24486 [Bacillus sp. NRRL B-14911]
gi|89084985|gb|EAR64120.1| hypothetical protein B14911_24486 [Bacillus sp. NRRL B-14911]
Length = 302
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 97/297 (32%), Gaps = 12/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + + +F + +R+ +S+ + +++ G +
Sbjct: 4 YAALAIGVVSVSTSAILVKF-SAAPSGVIAFYRLFFSVLLMLPLVLFKYGP----ELKQI 58
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + LA H+ + +L ++ + P+ + +F KER
Sbjct: 59 GRRDWMYSAIAGIFLAFHFILWFESLRYTSVASSTVLVTLQPLFAFAGTYLFFKERFTVK 118
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
I++ ++ I ++++ L A
Sbjct: 119 AILSGVIAIGGSVLISWGDFRVSGTALFGDLLALAACALVTAYLMFGQTVRKRLSLITYT 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V +I AL +++ G F++ + +F++ +K ST+
Sbjct: 179 FTVYSISALTLLIYVIAVGEPLGPYPASDWVYFILLAVIPTLLGHTLFNWSLKWLSTSTI 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ P+ V + F+L + + + IV+ ++++L + K K ++
Sbjct: 239 SMAILFEPVGAAVLAYFLLGELVAWYQAAGGMIVIGGIMLFLADGRMMKRKAKKAEA 295
>gi|86145773|ref|ZP_01064102.1| transporter, drug/metabolite exporter family protein [Vibrio sp.
MED222]
gi|85836472|gb|EAQ54601.1| transporter, drug/metabolite exporter family protein [Vibrio sp.
MED222]
Length = 299
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 91/285 (31%), Gaps = 16/285 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F+ + + + +++ + V E+++ R L SL + + K
Sbjct: 12 GVRFMILSAFGFALMSACVKYISNYGIPVFEIVAARALVSLVISYIDV--------KRKG 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L + YA+ T + +V PV + LG +FLKER+
Sbjct: 64 ISIWGNNKPLLFVRGAVGTAALMCVYYAVTTLPLAEATILQYVHPVFTALLGVLFLKERV 123
Query: 144 NHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+I + LL+M S + + A+ + + V
Sbjct: 124 QKSTMICIAFCLAGLLVMVQPSMNSGVNSELPMFSIMVALLGAFGSSIAYVIVRKLSQTE 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L + + F ++ T+ L+ G+ + ++
Sbjct: 184 DSSVIIFYFPLVALPISTALIWNDFVWPSLFLTVMLVLVGIFTQIGQYGLTKAMQTQAAG 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + + V+I + + G++V ++ +
Sbjct: 244 KASAYSYVQIVFSALLGVWIFNEIPSVWTYLGGGLIVTGALINVF 288
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 25/62 (40%)
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
Y + L+ I++Y P+ + V LK+ + I + ++V + P
Sbjct: 85 LMCVYYAVTTLPLAEATILQYVHPVFTALLGVLFLKERVQKSTMICIAFCLAGLLVMVQP 144
Query: 304 TV 305
++
Sbjct: 145 SM 146
>gi|303258304|ref|ZP_07344310.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
gi|302858923|gb|EFL82008.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
Length = 302
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 80/294 (27%), Gaps = 11/294 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G A WG + Q+L + + R++ + + F G
Sbjct: 1 MKILKGVFLAAFAGCCWGSMAVAAQYLFTNCGFEARHLTTLRLIGAGVLLLVLQAAFGGF 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
S+LK + +L++ +L + + FF+ + G I +L +
Sbjct: 61 QSILKPFKEKRNIRDVLIYGVGVLLIQYTFFLAIEQSNAGTAAIMVGVGPLFIIGYLA-I 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPV 190
+ + L I + ++ + + + V
Sbjct: 120 CKHRKPVPKEFFCLFLAISGVSLVVTKGNFESLDFVSTGAFWGLLSSAFGAFCTVQPKNV 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S G + + + F +
Sbjct: 180 ISRVGVSNVVGWGMVVGGSIACLFTNPFAMDVHWTLPSVLCYFQIIAFGTVAAFWCYLKS 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S I+ PL + SV IL ++ + ++ M++ P+
Sbjct: 240 TEYVIPSITAILGSFEPLSAVALSVIILGATFNSYELLGATAILANMLILAWPS 293
>gi|298346607|ref|YP_003719294.1| DMT family permease [Mobiluncus curtisii ATCC 43063]
gi|304389680|ref|ZP_07371640.1| membrane spanning protein DUF6 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|298236668|gb|ADI67800.1| DMT family permease [Mobiluncus curtisii ATCC 43063]
gi|304327084|gb|EFL94322.1| membrane spanning protein DUF6 [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 321
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 79/287 (27%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ + A WG T + L +V + ++ R +
Sbjct: 1 MKKLIPIFALALACAAWGSTFFMVKDHVLTEVPAADFLTVRFALASVVACLLWF-----R 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K + + + + + V +
Sbjct: 56 ELRTAGWKTLALGFGAGVLHGLGQLSQTWGLNMTTAATSGFITAMSVVLVPFVAMILFRE 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + L ++ A L + +L + G+ L + + A A + +
Sbjct: 116 HFKPITWLWMLLATLGLAALSLRGWSFGLGELITLLGAVFFAAHVASLGVISPGRSAGAL 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ PA+ V G I + + + ++ R +
Sbjct: 176 AAMQMVGPAVVNAVPALSDGELTLPPNAIVWADLVYMALVCALGTLFVQTWAQARMSSTE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ PL + SV + + + ++++A+V L V
Sbjct: 236 AALIMACEPLFATLFSVVFSGEALTWRLLVGGSLIMVAIVAAQLSGV 282
>gi|118588791|ref|ZP_01546199.1| integral membrane protein [Stappia aggregata IAM 12614]
gi|118438777|gb|EAV45410.1| integral membrane protein [Stappia aggregata IAM 12614]
Length = 326
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 85/295 (28%), Gaps = 9/295 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L++ A L+ I + L ++V +++ R L V I+
Sbjct: 31 SNTIGALWILLAAFLFSIMVTLIKLLGKDLTVFQILVIRQAVMLAIVAPKIL-------S 83
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
T K G+ + A++ + F FL
Sbjct: 84 GLPTSLVTKRPGLQITRIVFATTAMLCGFTAVIELPLADATAISFSKTFFLTIFAIWFLG 143
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-IAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + A ++ L +++M G L+ + A C I V
Sbjct: 144 ETVGVHRWGATIVGFLGVVMMLRPQGDGLVDPYALLAIAGAACAGMVMIVVRLLTRTDPP 203
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L A + + + LI G+++ + + + +
Sbjct: 204 VTILTYQAFGVGLIMVIPAVMTWQTPTLEQWGLLICIGIISWAAQMANIRAFRAGEATAI 263
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++YT L + + Q +++ A + + K
Sbjct: 264 ASLDYTRLLYATIFGALVFHQWPRVETLAGAAVIIAASIYTVRREAKRGQKLARA 318
>gi|228915982|ref|ZP_04079556.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228843665|gb|EEM88740.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|30263331|ref|NP_845708.1| EamA family protein [Bacillus anthracis str. Ames]
gi|47778156|ref|YP_020058.2| eama family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49186179|ref|YP_029431.1| EamA family protein [Bacillus anthracis str. Sterne]
gi|65320661|ref|ZP_00393620.1| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Bacillus anthracis str. A2012]
gi|165868532|ref|ZP_02213192.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167632528|ref|ZP_02390855.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|167637508|ref|ZP_02395788.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|170685086|ref|ZP_02876311.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|170705080|ref|ZP_02895545.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|177650024|ref|ZP_02933025.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190564777|ref|ZP_03017698.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227813799|ref|YP_002813808.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|229601021|ref|YP_002867588.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|254685945|ref|ZP_05149804.1| transporter, EamA family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254738415|ref|ZP_05196118.1| transporter, EamA family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254742419|ref|ZP_05200104.1| transporter, EamA family protein [Bacillus anthracis str. Kruger B]
gi|254752731|ref|ZP_05204767.1| transporter, EamA family protein [Bacillus anthracis str. Vollum]
gi|254761245|ref|ZP_05213269.1| transporter, EamA family protein [Bacillus anthracis str. Australia
94]
gi|30257965|gb|AAP27194.1| transporter, EamA family [Bacillus anthracis str. Ames]
gi|47551861|gb|AAT32533.2| transporter, EamA family [Bacillus anthracis str. 'Ames Ancestor']
gi|49180106|gb|AAT55482.1| transporter, EamA family [Bacillus anthracis str. Sterne]
gi|164715258|gb|EDR20775.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167515015|gb|EDR90381.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|167532826|gb|EDR95462.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|170129935|gb|EDS98797.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|170671346|gb|EDT22084.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|172083976|gb|EDT69035.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190564094|gb|EDV18058.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227004714|gb|ACP14457.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|229265429|gb|ACQ47066.1| transporter, EamA family [Bacillus anthracis str. A0248]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 95/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVFITTFEK 293
>gi|329955205|ref|ZP_08296162.1| putative membrane protein [Bacteroides clarus YIT 12056]
gi|328526204|gb|EGF53223.1| putative membrane protein [Bacteroides clarus YIT 12056]
Length = 301
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 91/292 (31%), Gaps = 15/292 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + A +G+ PL+ L ++ V+ +R ++ + +
Sbjct: 1 MTNERLKGFTYGAIAAASYGMNPLFALPLYGAGMNADSVLFYRYFLAIVMLGVLMKVKKQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L K + + + + F + + S FV PV+ + +
Sbjct: 61 SFALKKTDILPLAVM------GLLFSFSSLFLFESYNYMDAGIASTILFVYPVLVAIIMA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIP 189
VF E+++ + + + + + ++ L++ + ++ Y
Sbjct: 115 VFFHEKVSFITMFSIAMAFTGISLLYEGGDGKTLNMFGVLLVILSSLTYAVYIVGVNRSS 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L + YVV F + L + +
Sbjct: 175 LKDLPTAKLTFYALLFGVIIYVVRLDFCAALQPVPSPVLWVNVLSLALFPTIISLIMMTL 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I + I+ P+ + V + + + + +++ A+ + +
Sbjct: 235 SIHSIGSTPAAILGALEPVTALFFGVAVFGEQLTPRIMLGVLMILTAVTLII 286
>gi|330821484|ref|YP_004350346.1| hypothetical protein bgla_2g24040 [Burkholderia gladioli BSR3]
gi|327373479|gb|AEA64834.1| hypothetical protein bgla_2g24040 [Burkholderia gladioli BSR3]
Length = 303
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 80/296 (27%), Gaps = 5/296 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYIL----WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFF 69
+ +N S + L A W + + L+ +S L + + R + V
Sbjct: 7 ASKNCSPRDLRQVLLALGAVAFTVVSWASAFPFIRIGLQGLSPLHLAAGRFGTAAVLVLA 66
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ + L +D+L+ + L + T +
Sbjct: 67 WLAWRRPRLPGWRDSLRFLLCGLFGIAFYNALLNTGEQTVAPGAASFIASTLPIFTAVLA 126
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + + L +A + +I L G + A +A F +
Sbjct: 127 VLFLGERINAWGWIGSLVSLAGIAVIARGQPGGLALGAGSTLILAAAFCTASYFVLQRRL 186
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ L AL+ W + G + L+ + + ++Y
Sbjct: 187 IPVYGPLACTAYTLLAGALWLSPWLPGAIGALPAAPHGTLAAVLMLGVFPAALGYASWTY 246
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + Y +P + S ++ + + +V+
Sbjct: 247 ALGYFGAARAANFLYLSPAVATALSAWLTGERPGLATLAGGATAIAGVVLVAWRGR 302
>gi|327191570|gb|EGE58582.1| putative transporter permease protein [Rhizobium etli CNPAF512]
Length = 331
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 84/288 (29%), Gaps = 4/288 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ AS + + G +P++ + L +V + RV +L +F +
Sbjct: 39 TLSEASPSNRLALAALVLGGAAIGGSPIFVR-LSEVGPMATAFWRVALALIPIFIVSLLK 97
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ V V A LA + L + + +I+V
Sbjct: 98 KNAGPRPQSLADYFMLVLPGVMLALDLAAWHLSLTMTSVANATLLANLAPVFVTLIAVLF 157
Query: 135 GSVFL---KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
L + +++ + + IA + A
Sbjct: 158 FRARTSGVFLSGLLLALAGVVVLKGGPASLGNGDLRGDGTAMIAAFFYACYILAIGRLRS 217
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I + A A+ F G ++ + ++ +Y +
Sbjct: 218 RFDTIRIMLWSTASAAVCVFPLAFFFEGHMLPATLYGWSMLFGLAFISHAGGQVAITYAL 277
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P++ + + +L + I T++ + +V+ ++V
Sbjct: 278 AYLPPAFSSLTLLLQPVVAAILAWALLNETIGTMQALGAAVVLAGIMV 325
>gi|306845707|ref|ZP_07478276.1| transporter, DME family [Brucella sp. BO1]
gi|306274028|gb|EFM55855.1| transporter, DME family [Brucella sp. BO1]
Length = 305
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 92/285 (32%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F +Y + ++ +FL+ +S E+ + + + F+
Sbjct: 2 LYGILLAFASYAAFAVSDACVKFLDGTLSPYEIAFY-----GAVLGLLAIPFTKKADDAW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L +FLKE+
Sbjct: 57 LDMFRTGNIKMWLLRTVTAAMGVIGSVAAFTYLSMAEAFALIFLLPAYVTILSVIFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L++ L + + A I + +
Sbjct: 117 VGWRRWSAVAIGFAGVLVVLRPGFRELSIGHMGALAAGMGGATSIIIFRVMGKNEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G + ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLVGPILICGALMAPSYQAPGTMQWVYLAGYGLLAALANILLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ ID I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDMPMLIGIVLITISGLFTFIRERQR 281
>gi|294139247|ref|YP_003555225.1| integral membrane domain-containing protein [Shewanella violacea
DSS12]
gi|293325716|dbj|BAJ00447.1| integral membrane domain protein [Shewanella violacea DSS12]
Length = 291
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 113/299 (37%), Gaps = 11/299 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ ++ G L + A +L+G T L+++ + +S L + R + + + +
Sbjct: 1 MNQTASNKQA--GLLELHLAVLLFGGTALFSKLI-PLSALNITLLRCVVAAVVLACIVKA 57
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
LSL + + I+++HW + ++ + ++F PV++VF
Sbjct: 58 SKKTLSLDATKD-----YFIALGLGIIVSLHWVTYFASMQLSSVAIGMIAFFTYPVMTVF 112
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ + + II+ + ++L ++++ + +A+ + +A+ AR +
Sbjct: 113 IEPIITGNPIQRSDIISGITVLLGVILLIPEASLGNDVTMGIALGILSAAFFTARNLLHK 172
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + ++ E + L L+ + + +F+
Sbjct: 173 RYFSAYSGSQAMFYQTGVAVLFLAPWNTVEFSQIEQSTWGLVLLLGVIFTAAPHALFTTA 232
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ TV ++ P V ++ L + +D I +VV + +
Sbjct: 233 LRHLSAKTVSLVSCLQPFYGAVLALLFLGEQLDIKPAIGGLLVVATAIFETRRNRKTAK 291
>gi|307243516|ref|ZP_07525665.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
17678]
gi|306493105|gb|EFM65109.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
17678]
Length = 350
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 82/295 (27%), Gaps = 6/295 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ L+ A + I ++ L V + S L + GV +
Sbjct: 1 MKNKKLLAVLYAILAAAFYAINTPLSKLLLGHVPSTLMASFLYLGAGVGVGMMYTFHWKN 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ KN + + + V F + + S V + +
Sbjct: 61 ERKSERLGKNDILYTIGMITLD--IVAPIFLMLGIKLGNASNASLLGNFEIVATTLIALW 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSE 194
E+++ IA I LS +I++L S + + + SE
Sbjct: 119 IFNEKVSKKFWIAIGFITLSSIILSLDSAQGFSFSYGSLLVLLATLCWGLENNCTRSISE 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
E+ L + F ++ + + K
Sbjct: 179 KSTYEIVTLKGIGSGTGAFIVALIVGEKFPETKYILFVMLLGFVSYGLSIFTYIRAQKYL 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ AP + + + +L + I I+++ V + T+I S
Sbjct: 239 GAAKTSAYYAIAPFIGTMLAFLLLGDQLTWKYLIALVIMIVGTVFVVSDTLIQSH 293
Score = 39.1 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 58/165 (35%), Gaps = 6/165 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G+L V A + WG+ T+ + + S E+++ + + S G F +
Sbjct: 155 GSLLVLLATLCWGLENNCTRSISEKSTYEIVTLKGIGSGTGAFIVALIVGEKFPE----- 209
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ + +I A TS Y + P I L + L ++L
Sbjct: 210 -TKYILFVMLLGFVSYGLSIFTYIRAQKYLGAAKTSAYYAIAPFIGTMLAFLLLGDQLTW 268
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+IA +++I+ + + + I + +
Sbjct: 269 KYLIALVIMIVGTVFVVSDTLIQSHTHFHTHVITHTHDGNTHTHT 313
>gi|256377192|ref|YP_003100852.1| hypothetical protein Amir_3091 [Actinosynnema mirum DSM 43827]
gi|255921495|gb|ACU37006.1| protein of unknown function DUF6 transmembrane [Actinosynnema mirum
DSM 43827]
Length = 309
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 81/276 (29%), Gaps = 7/276 (2%)
Query: 31 FCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+WG + + V ++V R L+ ++ + + T +
Sbjct: 17 VLLSAIWGSSFALIKLAVDAGVPPVQVALLRCLFGALALWLICLAQRAEIPRDARTWGHA 76
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTS--FSYFVTPVISVFLGSVFLKERLNHL 146
V +L+ + V +G + + + ++ V L
Sbjct: 77 AVVAVLLNAVPFTLVAFGESKVDSVLAGALNATTPLATLAFALLVAPGERVTWTRLAGLL 136
Query: 147 QIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
A +L++L G A + + + + R+ + G + +
Sbjct: 137 LGFAGVLVLLGAWRGLEGDVLVGGLACVAATSCYGAGFAYTRRFLTGGPHRASALSAAQI 196
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L +V + G ++ + + + + I+ A + +
Sbjct: 197 TCATLQLLVAAPLLSDSLVWPGATAVLALVVLGAVGTGYAYVLNFDLIREAGPTVASTVT 256
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL +L +P+ +V+ +++
Sbjct: 257 YVTPLWSTALGALLLAEPVGWNTVAGGAVVIGGILL 292
>gi|163857383|ref|YP_001631681.1| hypothetical protein Bpet3071 [Bordetella petrii DSM 12804]
gi|163261111|emb|CAP43413.1| conserved hypothetical integral membrane protein [Bordetella
petrii]
Length = 317
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/299 (11%), Positives = 88/299 (29%), Gaps = 13/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY-FSGG 77
+G +L+ + + + + +I+ R+L+++P
Sbjct: 14 SSRALGFFLATLGAVLFAAKAIVVKITYRYGIDAVTLIAFRMLFAMPFFAAVAWRESRRA 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + V + + L L F++P + V L +
Sbjct: 74 ARGELPVLSRRERVQLGLLGLLGYYFSSFLDFLGLRYVSASLERLILFLSPTLVVLLSAW 133
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKT 187
+LK + Q +A + L ++++ +A+ +++ Y
Sbjct: 134 WLKRPVAPRQWVAMVASYLGVILVFAQDLRQGAGSHVALGALFIFGSALSYAVYLICSGE 193
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + +L V + I L +
Sbjct: 194 LVKRVGATRLVAYAMLVSCLACVVQFFLVHPPSMLVQPAGVYGYSFIHATLNTVVPVFML 253
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + T ++ P+ ++ + ++L +PI T + +V++ + V +
Sbjct: 254 MWAVALVGAPTASLLGMMGPVSVLFLAAWLLGEPITTWQLAGTALVLVGVFVLMGGRSR 312
>gi|27379422|ref|NP_770951.1| hypothetical protein blr4311 [Bradyrhizobium japonicum USDA 110]
gi|27352573|dbj|BAC49576.1| blr4311 [Bradyrhizobium japonicum USDA 110]
Length = 303
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 82/287 (28%), Gaps = 4/287 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + + G + L ++ L ++ RV + + K
Sbjct: 15 LLAVLSILWGGSFFFNSAGLRELPPLTLVFLRVALGAAVLLPLLHVQGISFPKGTLGWKP 74
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF----LGSVFLKERL 143
+G+L + G I + F V+++ L + +
Sbjct: 75 FFVIGLLNNVIPFSLIVIGQTIIPSGLASILNATTPLFTVTVMAMAGEEALQMRRVAGVV 134
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + L GI L A AR+ + + G +
Sbjct: 135 LGVVGVVILRGWGIETRPGQGFGILLCLGGACSYGFAALAARRLLKDSAPLGTATFQLMA 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + V G L GL + + +F ++R+ + V ++
Sbjct: 195 STVMMAVVAAVMEQPWHLPAPGLTTWLAVLGLAGLSTALAYIVFFQILRRSGATNVMLVT 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P+ I+ +L +PI ++ A++V + +
Sbjct: 255 LLIPVTAILLGWLVLGEPISMREIAGAIVIGSALLVIDGRALRMLQR 301
>gi|188583955|ref|YP_001927400.1| RarD protein, DMT superfamily transporter [Methylobacterium populi
BJ001]
gi|179347453|gb|ACB82865.1| RarD protein, DMT superfamily transporter [Methylobacterium populi
BJ001]
Length = 289
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 122/282 (43%), Gaps = 8/282 (2%)
Query: 25 MGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG ++ AY+ WG+ P++ + L+ + +++ R+LWS V I L+
Sbjct: 1 MGLIYALAAYLSWGLVVPVHFRLLDGIPPGTILAQRILWSALLVTGLIALLRKRLANPFP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L+ SA ++AV+W ++ A+ + S YF+ P++SV LG++ L ERL
Sbjct: 61 L---RPRHAGLLVSAGLIAVNWMLYLVAVTSGHMLDASLGYFINPLVSVALGALVLGERL 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q +A +++L ++I +G + A FA + I
Sbjct: 118 RPVQGVAVAIVVLGVVIAVAMAGRL----PLLSLGLAVTFALYGLVRKLVAVDGIVGFCA 173
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + L G+ + F+ R L+T+G+M+
Sbjct: 174 ETFLLLPAALAYLAFAAAPVPEDARTGALLALTGVTTALPLIWFAAAATRLTLATLGLMQ 233
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y AP ++ S + +P+ R ++FG++ +A+V+Y +
Sbjct: 234 YIAPSCLMGLSTLVYGEPLTPDRVVLFGLIWLALVLYAYDAL 275
>gi|315655166|ref|ZP_07908067.1| membrane spanning protein DUF6 [Mobiluncus curtisii ATCC 51333]
gi|315490421|gb|EFU80045.1| membrane spanning protein DUF6 [Mobiluncus curtisii ATCC 51333]
Length = 321
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 79/287 (27%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ + A WG T + L +V + ++ R +
Sbjct: 1 MKKLIPIFALALACAAWGSTFFMVKDHVLAEVPAADFLTVRFALASVVACLLWF-----R 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K + + + + + V +
Sbjct: 56 ELRTAGWKTLALGFGAGVLHGLGQLSQTWGLNMTTAATSGFITAMSVVLVPFVAMILFRE 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + L ++ A L + +L + G+ L + + A A + +
Sbjct: 116 RFKPITWLWMLLATLGLAALSLRGWSFGLGELITLLGAVFFAAHVASLGVISPGRSAGAL 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ PA+ V G I + + + ++ R +
Sbjct: 176 AAMQMVGPAVVNAVPALSDGELTLPPNAIVWADLVYMALICALGTLFVQTWAQARMSSTE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ PL + SV + + + ++++A+V L V
Sbjct: 236 AALIMACEPLFATLFSVVFSGEALTWRLLVGGSLIMVAIVAAQLSGV 282
>gi|312962394|ref|ZP_07776885.1| membrane protein [Pseudomonas fluorescens WH6]
gi|311283321|gb|EFQ61911.1| membrane protein [Pseudomonas fluorescens WH6]
Length = 414
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 91/298 (30%), Gaps = 21/298 (7%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ +WG + L+ + + ++ + RV + G+ +
Sbjct: 7 LYLLGLAAIWGASFLFMRIIAPEIGSVPTAFFRVSIAAAGLLAMLAVMRVKWDF------ 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K +L+ + + A ++ TP++ V +G +F ERL
Sbjct: 61 QGKFKTVLLLGVINSGIPATMYSVAAQVLPAGYSAIFNATTPLMGVLIGGLFFSERLTPS 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLL--------------SLAIAVTWSAYCFARKTIPVGS 192
++ L +L + ++T + + + A + + + S
Sbjct: 121 KVAGVFLGLLGVGVLTRAGPVAFDLELLMGALACLLATTCYGFAGFLARRWLDQRGGLDS 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
M + L ++ S + G T L + + + ++ +
Sbjct: 181 RLSALGSMLGATLFLLPLFAYSAISHPPASWGGWQVWTSLLGLGLVCTALAYVLYFRLLT 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P ++ +L +P+ ++ A+ + L + +
Sbjct: 241 AIGPVKSMTTTFLIPPFGVLWGALLLGEPLSMAHVYGGVLIGGALGLVLGVGKLAKAR 298
>gi|228940430|ref|ZP_04103000.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973346|ref|ZP_04133935.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228979909|ref|ZP_04140230.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
Bt407]
gi|228779924|gb|EEM28170.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
Bt407]
gi|228786542|gb|EEM34532.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228819272|gb|EEM65327.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326941065|gb|AEA16961.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 99/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G +++ A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAIYLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQAASIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELLDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|49479496|ref|YP_037481.1| EamA family protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|301054869|ref|YP_003793080.1| putative transporter [Bacillus anthracis CI]
gi|49331052|gb|AAT61698.1| possible transporter, EamA family [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|300377038|gb|ADK05942.1| putative transporter [Bacillus cereus biovar anthracis str. CI]
Length = 294
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKQDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVLITTFEK 293
>gi|317481083|ref|ZP_07940162.1| integral membrane protein DUF6 [Bacteroides sp. 4_1_36]
gi|316902796|gb|EFV24671.1| integral membrane protein DUF6 [Bacteroides sp. 4_1_36]
Length = 303
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 97/299 (32%), Gaps = 18/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G LF A ILWG+ + L + S L V + R++ + + ++
Sbjct: 2 NKNIQGHLFALTANILWGLMAPIGKSALVEFSALSVTTFRMVGAAACFWLLSLFCKREQV 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+D LK + + L + G +I+ L S P++++ + +++L
Sbjct: 62 DHRDMLK------IFFAALFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTMIVAAIYL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTI 188
KE + + +++ + + I+ + S G L LA +
Sbjct: 116 KEPVTNKKVLGIFVGAMGAFILIMSSQTTGAGNGSLIGDLLCLLAQISFSIYLTVFKGLS 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S M V A ++ + + + + +
Sbjct: 176 QKYSPITLNKWMFVYASMCYIPFSYHDVAAIQWSEISTAALLQVGYVVVGGSFLAYIFIM 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ ++ + + + I +V + + +
Sbjct: 236 SAQRLLRPTVVSMYNYMQPIVASTVAIILGLGVFNLEKGIAIALVFLGVYIVTQSKSRK 294
>gi|304392288|ref|ZP_07374230.1| DMT family permease [Ahrensia sp. R2A130]
gi|303296517|gb|EFL90875.1| DMT family permease [Ahrensia sp. R2A130]
Length = 307
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 96/295 (32%), Gaps = 8/295 (2%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + + G ++ I++ + + L + R + L + AI
Sbjct: 9 KPSRTLPLQGIAWMVVTTIMFVVVTGIVRELGSDLPAPVSAFIRYAFGLVLLAPAIFRMM 68
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + A+ + +A+ + +VTP++
Sbjct: 69 RNVPEF-------ELIKFSALRGLAHALGVTLWFFAMARIPIAEVTAIGYVTPIVVTIGA 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++FL E+L ++ + ++ LI+ + +A +A FA + S G
Sbjct: 122 AIFLGEKLRLRRMAGVVAGLIGALIIIRPGFQEVSIGQLAQLGTAPLFAASYLMTKSLTG 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + + ++ + + + FL + +F + + A
Sbjct: 182 RMSSTDIVVMLTICVTIFLFPLALWDWQWPTMRELGFLFACAIAATFGHYAMTRALAAAP 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+S + + + + F+ + +D + I+V+A + +
Sbjct: 242 ISVTQPITFLQLVWAVALGWFVFGEAVDPWVIVGGTIIVVAASWISYRENQLAKR 296
>gi|170758507|ref|YP_001786725.1| putative transporter [Clostridium botulinum A3 str. Loch Maree]
gi|169405496|gb|ACA53907.1| putative transporter [Clostridium botulinum A3 str. Loch Maree]
Length = 392
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/305 (10%), Positives = 80/305 (26%), Gaps = 11/305 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +G + V A + WG + T+ L + S+P +F+ I F S
Sbjct: 73 ANDKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYLIYSFKKDPS 132
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV-FLGSVF 138
L K K + LL V+++ +
Sbjct: 133 LFKVDKKGVLFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKE 192
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR----------KTI 188
+ ++ L+ + M L S I + +
Sbjct: 193 KFTTQKAISMLLILIGCFMMCEMHKLGSFNLSSKGIFWGLISGFTFALQILLAKVSNEKY 252
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ AI ++ + + +
Sbjct: 253 HYNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFKSSNNLFFLFKNIFWSVVGTLIANTAYV 312
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ + S ++ ++ V + Q ++ V+ + ++++++++ +
Sbjct: 313 KSVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEAKKSVLL 372
Query: 309 GKNKT 313
K
Sbjct: 373 KLFKR 377
>gi|119387291|ref|YP_918325.1| hypothetical protein Pden_4566 [Paracoccus denitrificans PD1222]
gi|119377866|gb|ABL72629.1| protein of unknown function DUF6, transmembrane [Paracoccus
denitrificans PD1222]
Length = 395
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 98/292 (33%), Gaps = 15/292 (5%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAI 71
L + +P L A +WG T + L L V + R L + + +
Sbjct: 101 TLQQPEVDMPKPSDILLTALAPAVWGSTYIVATELLPGAPPLSVAAIRALPTGLILLLLV 160
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ K V A V W A G + + V P+I
Sbjct: 161 ----------RQLPKGDWLWRSFVLGALNFTVFWALLFVAAYRLPGGIAATVGAVQPLIV 210
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG----IPLLSLAIAVTWSAYCFARKT 187
VF S L R+ L ++AA++ + + ++ L G +P ++ A+ +S T
Sbjct: 211 VFAASAVLGTRIRVLSVLAAVMGMAGVALLVLQDGAVPDMPGIAAALGGAFSMAFGTVLT 270
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ ++ + + + L + + ++
Sbjct: 271 RKWRPPVSALVLTAWQLTAGGLLLLPLALLLDPPMPPLDAANAAGMGYLVLFTALTYILW 330
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+ R + + V + + +PL I+ IL Q + + I +VV ++ +
Sbjct: 331 FRGVARLEPAAVSSLGFLSPLTAILLGWAILGQALSASQMIGAAVVVASIWL 382
>gi|329118211|ref|ZP_08246921.1| DMT superfamily drug/metabolite transporter [Neisseria
bacilliformis ATCC BAA-1200]
gi|327465632|gb|EGF11907.1| DMT superfamily drug/metabolite transporter [Neisseria
bacilliformis ATCC BAA-1200]
Length = 290
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 79/292 (27%), Gaps = 16/292 (5%)
Query: 31 FCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
A ++W T + ++ E + + R++ + V G + K
Sbjct: 5 IIALLVWSSTFIAAKYAETMADPAMTVQLRLVVAALIVLPVCRRHMGRIPRDK------- 57
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+L S + + P++ VF+G F ++ +
Sbjct: 58 WKPLLWLSFCNYIGVLMLQFIGVKYTSAASAVTVIGLEPLLMVFIGHFFFHDKARWFHWL 117
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP--- 206
+ ++ L G ++ E+ A
Sbjct: 118 CGAAAFAGVALLILGGGAEGGVSLFGCFLVFCGGVVFCAITRPTQRLIAEIGAPAYTSVS 177
Query: 207 -----ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + L + + +++ G+ + G+
Sbjct: 178 LAAAAVLCVPFTLLLAESYAVRWNAQGVAAVLYLGVGCSWLAYLLWNKGMLTVPANMTGV 237
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P+ ++ +V IL + I + + IVV A I + K +
Sbjct: 238 LLSLEPVFGVLLAVLILGEHITPLSWLGILIVVAATFCAGALPQIMAKKRQA 289
>gi|312131332|ref|YP_003998672.1| hypothetical protein Lbys_2657 [Leadbetterella byssophila DSM
17132]
gi|311907878|gb|ADQ18319.1| protein of unknown function DUF6 transmembrane [Leadbetterella
byssophila DSM 17132]
Length = 292
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 14/288 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G LF I + + + S +E++ R +SLP ++ +
Sbjct: 4 KGILFTLLGAICFSAKAIMVKLAYLQYDASTMELLGLRYFFSLPIFLIIALWRYKNGKFI 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+K + + F +A L + F P + V +F K+
Sbjct: 64 SLKIKEWAILLLSAFLGYYMA--SWLDFQGLQYVSAGIERVILFTYPTLVVLFSRLFFKK 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVGS 192
++ I A +L + I+ I AVT++ Y +
Sbjct: 122 AISRTSIWALVLCYGGIFIIAAEPKFFAGENVIVGGVLVFLSAVTYALYLVFSGELSSRL 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ ++ L L + + GI+
Sbjct: 182 GSINTNTLGMIFSSLFVFIHVAFTPAISWGNLDPGVYYYGLGIALISTVIPTFLMMEGIR 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ I+ P+ ++ F L + +V+I + +
Sbjct: 242 LLGANKASIIGSIGPVSTLIMGYFFLNERFTLQELAGSILVMIGVFLI 289
>gi|115379205|ref|ZP_01466323.1| membrane protein, putative [Stigmatella aurantiaca DW4/3-1]
gi|115363792|gb|EAU62909.1| membrane protein, putative [Stigmatella aurantiaca DW4/3-1]
Length = 299
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 90/290 (31%), Gaps = 14/290 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
A+ P + L++ A +LW + L ++ ++ S R L + +F
Sbjct: 9 PAATAPMLRPRLYLLGAAVLWSTAGAAIK-LSTLNAYQLASGRSLIAALVLFLLF----- 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ A A FI+A F P+ + L
Sbjct: 63 -------PEGRRRPTLRMLSVAAASAATVVLFIFANKLTTSANAIFLQDTAPLYVLLLSP 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V L+ER + + +A + ++ L + P V + TI +
Sbjct: 116 VLLRERPSRGEWVAVPIFLIGLSLFFFDQLSPGQLQGNLVAMGSGVAFALTILGMRAAST 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L + + G + + L + +F G++
Sbjct: 176 EGSAILIWGNLLAGLAFLGPALNSPM-PTLLDIALLAFLGIFQLGMGYALFYRGLRDVPA 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ P+L V + + + + GI+++A L V
Sbjct: 235 VEASLLVLLEPVLNPVWAFLVAGEQPGPWALLGGGIILLATAWRTLLGVR 284
>gi|330996931|ref|ZP_08320796.1| putative membrane protein [Paraprevotella xylaniphila YIT 11841]
gi|329572005|gb|EGG53676.1| putative membrane protein [Paraprevotella xylaniphila YIT 11841]
Length = 305
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 98/300 (32%), Gaps = 15/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + A + +G+ PL+ + + V V+ +R +++L + +
Sbjct: 1 MDNKKVKGYAYGVIASVSYGLNPLFALPLYASGIRVDSVLFYRYVFALLFLAVMMKMSGQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L + + + + + F + + S F+ PV+ + +
Sbjct: 61 SFALKRSEILPVAVM------GLLFSFSSLFLFQSFNYMDAGIASTILFMYPVLVAVIMA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIP 189
VF KE+L+ ++I + + + ++ G LS+ ++ Y
Sbjct: 115 VFFKEKLSVVKIASIATAFVGISMLYKGEGGATLSMTGVCLVLMSSLTYALYIVGVNRSS 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ G + + +L Y+V + L + +
Sbjct: 175 LKEMPGLKLTFYAILFGSLVYIVRLRGGMDLQWLTEGTQWMNALGLALFPSLISMVTIAK 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ + I+ PL + V + + + + +++ A+ + ++
Sbjct: 235 AIRNIGATPAAILGALEPLTALFVGVMVFHERLTGGNVVGILLILFAVTLIVVGPRGWLR 294
>gi|222094333|ref|YP_002528392.1| transporter, dmt family [Bacillus cereus Q1]
gi|221238390|gb|ACM11100.1| probable transporter, DMT family [Bacillus cereus Q1]
Length = 308
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 102/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHTRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ ++Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKFPAYMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTTVVIGWGMLIGGIALLICNRSFEWDQLSQTFTLKTFSILILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|116514885|ref|YP_813791.1| DMT family permease [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116094200|gb|ABJ59353.1| permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 303
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 95/298 (31%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L LWG + + L Q ++ ++ R + + + G
Sbjct: 6 LGILLAITGAALWGTSGTAAEMLYQSPNINTFWLVDVRSWLAGASLLLISLVHKG-KGTF 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +FS + + Y + + F+ PV+ + + ++
Sbjct: 65 AIFKNPRDLLYAALFSMLGITGAQFTYFYTVAASNAPTATVLVFLAPVLIICFMAAKNRQ 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF----- 196
+ +IA LL ++ +++ + L++ + A +
Sbjct: 125 MPRRIDLIAVLLAVVGTVVLVTNGNFSHLAVTPKTLVWGFFSALTQALAIAMPAKLFKKY 184
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + ++ + + +L + F + ++ +
Sbjct: 185 GTITILAWGMLLGGIILSPALAVMPATGVTVKEWSLVIYIVIAGTVFAYSLYLSSVMYIS 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V ++E PL+ + SV +L ++ ++++A + ++P+ +
Sbjct: 245 AGLVSMLEAFEPLVATILSVTLLGSDFGIMKMAGGVLIILATCLQVVPSPRRGKLQRK 302
>gi|324325830|gb|ADY21090.1| EamA family protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 322
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 96/297 (32%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L + +S +++ R+L S + + +
Sbjct: 5 NRLKGIIMVVIGACLWGLSGTAAQQLFQYDNISTEWLVTIRLLISGVILLIISSFGTRKK 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + M++F + + ++ + + ++ P+
Sbjct: 65 EIFSIWKQRSDTTKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 125 WNVRPSKIDFISIALSLVGTFLLLTNGSVHNLAVSTPAIVWGILSGLSLAFYSLYSKKLL 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + + E L + + +F
Sbjct: 185 DRWSSSVIVGWGMIIGGIGVTIVHFITTKEFILLSTMKYVKLNTLPLITFVIIFGTLIAF 244
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSVFIL P + + + V++ +++
Sbjct: 245 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVFILHVPFQSFQLLGALCVIVMVLILS 301
>gi|325279584|ref|YP_004252126.1| hypothetical protein Odosp_0873 [Odoribacter splanchnicus DSM
20712]
gi|324311393|gb|ADY31946.1| protein of unknown function DUF6 transmembrane [Odoribacter
splanchnicus DSM 20712]
Length = 318
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 101/301 (33%), Gaps = 16/301 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G ++ + +G+ PL+ + V V+ +R S + +V L +
Sbjct: 4 RLKGLIYGVISSATFGLIPLFALPAIRNGIGVDSVMFYRFGISALVLGLWLVIRRYDLRI 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + L A+ + L + + +F+ PV+ + +F K
Sbjct: 64 ------SGRELFTLAGLGIFYAMTALLLTTSYLYIPSGIATTIHFLYPVVVTTVMILFFK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
++++ I A L+ IL + +++ + G+ L+ + K+
Sbjct: 118 DKVSVPVIGATLMAILGVYLLSNNGTAGTVSLKGLLLVLTTVVTYALYIVGVNKSCVHRM 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+LA +F + + L+ + ++
Sbjct: 178 DGLKLTFYVLLAGAMVFGLNLSVKGVPLDPIPDWETGVYLLLLALIPTLVSDFTLILSVQ 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+T ++ PL + V+ L + + + I++ A+ V +L + + +
Sbjct: 238 HVGSTTTAVLGCMEPLTAVCMGVWFLHESLGFWQLAGIVIILSAVSVVILANSKDGFRPR 297
Query: 313 T 313
Sbjct: 298 R 298
>gi|116668959|ref|YP_829892.1| hypothetical protein Arth_0391 [Arthrobacter sp. FB24]
gi|116609068|gb|ABK01792.1| protein of unknown function DUF6, transmembrane [Arthrobacter sp.
FB24]
Length = 331
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 82/285 (28%), Gaps = 14/285 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G V +LW + + + S + R+ + + ++ L
Sbjct: 47 NRLGVAAVLVTVVLWASAFVGIRAVGPSFSPGSLTLGRLAIAAVVLGLVVL------PKL 100
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K + +L + + A + V P++ + + LKE
Sbjct: 101 RILPKGREWWPILAYGVMWFGGYNVALNAAEHLLDAGTAALLINVNPILVAVMAGLLLKE 160
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF-------ARKTIPVGSSE 194
II +L+ + ++ L SG + V + +
Sbjct: 161 GFPRWLIIGSLIAFAGVAVIALSSGQRSTADVAGVLLCLLAAVLAAVSVIIQKPVLRKFP 220
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + A+ + ++G E + + F ++Y +
Sbjct: 221 AAQATWFGIMVGAVCCLPFSGQLVAELQQAPPPATLGLVYLGIFPTAIAFTTWAYALSLI 280
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P I+ S +L + + I ++ + +
Sbjct: 281 DAGKLAATTYLVPGTTILISWLVLGEVPTVWGLVGGVICLVGVGL 325
>gi|254476109|ref|ZP_05089495.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214030352|gb|EEB71187.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 318
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 92/277 (33%), Gaps = 7/277 (2%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y ++ + + L +S ++++ L S P + ++ + P
Sbjct: 13 YAIFSTHDVVVKVLGANISPIQLVFFSSLLSFPLIMLMLI------KDVTPGHLRPAHPW 66
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +++ YA FVTP++ L L ER+ ++ A L
Sbjct: 67 WTALRSITMSLVPASAFYAFSELPLAQAYALLFVTPLLITLLSIPILGERVGLPRLGAVL 126
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ + ++++ L A ++A C A +++ + + ++ P L
Sbjct: 127 VGFIGVMVVLRPGATTLGLGHAAALFAALCAAFQSVVLRKISADERRVVLMIYPMLTTFA 186
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
G + + + L + + + V M+Y+ + +
Sbjct: 187 VMGIALPLVYVPMEGSMFAGIAVVALFGFCATLLTVSAYTIGEAAIVAPMQYSQIIWATL 246
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
SV + + +D + I++ + + +L
Sbjct: 247 FSVLMFGETVDVMTLTGAAIIIGSGIFIVLREAFGGR 283
>gi|254502038|ref|ZP_05114189.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222438109|gb|EEE44788.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 331
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 94/295 (31%), Gaps = 9/295 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P +G L++ A L+ I +FL + +SV +++ R +L + A G
Sbjct: 36 PNTIGALWILLAAFLFSIMVTLIKFLGQDLSVFQILVVRQ--ALMLLIVAPKVLPGLPGS 93
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + ++ ++ +L A++ + F FL
Sbjct: 94 LATKRPGLQLTRIVFATSAMLLG-----FTAIIEMPLADATAISFSKTFFITIFAIWFLG 148
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-IAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ + A ++ L +L+M SG L+ + SA C I +
Sbjct: 149 EQVGKHRWGATIVGFLGVLLMLRPSGEGLVDPFALMALGSAACAGMVMIVIRILTRTDPP 208
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L A+ + + + L G + + + + +
Sbjct: 209 NTILTYQAMGVGLIMIIPAWMTWQAPTLEQWALLAAVGFFSWAGQMANIKAFQAGEATAI 268
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++YT L + I Q I +V+ A + + I +
Sbjct: 269 ASLDYTRLLYATLFGALIFSQWPGVETLIGASVVIAASIYTVRREAIRGRQLARA 323
>gi|118478659|ref|YP_895810.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|118417884|gb|ABK86303.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis str. Al Hakam]
Length = 294
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSVYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + F+L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWFLLNETLSSNFFIGGILIICSVFITTFEK 293
>gi|118476269|ref|YP_893420.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|118415494|gb|ABK83913.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis str. Al Hakam]
Length = 323
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 105/298 (35%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 16 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKK 75
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + ++ +++FS + FI + + F+ PV+
Sbjct: 76 QNIFQIWKHPR--YSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 133
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 134 AFEQRKFPAPMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 193
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 194 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 253
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 254 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 311
>gi|283850662|ref|ZP_06367949.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
gi|283573905|gb|EFC21878.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
Length = 315
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/318 (10%), Positives = 97/318 (30%), Gaps = 15/318 (4%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLP 65
++ + ++ + + A +LWG + + + + S L V+ R++ +
Sbjct: 4 RRAIAGRMTALPNNRLAWPAFFALVAATLLWGGSFIAMKIAMRGFSPLLVVFCRMVLASA 63
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
G + G++ + +++ F AL Q +
Sbjct: 64 VFGLLWRRLGGFRAA------KGDWPGLVFMAFCEPCLYFVFEAKALTLTQASQAAMVTA 117
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVT 177
+ P+++ + FLKE+L + L + + +M+ +
Sbjct: 118 LLPLLTAVAAAWFLKEKLEGKAMAGLCLAVAGVGVMSASGEATGDAPYPVLGNFLEFLAM 177
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
A + + + V + + F + P +
Sbjct: 178 CCAVGYIVTAKRLAARHRPLYLTAVQSFTGAVFFAPVLFFTPFPETIAPGPALAVVFLGL 237
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + +++YG+ RA + P+ + S +L + + + + + +
Sbjct: 238 GVTFVAYGLYNYGVSRAPAAKAAAFINLIPVFACLLSRVMLDETLTPAQWTGGLMALGGV 297
Query: 298 VVYLLPTVINSGKNKTKK 315
+ P + ++
Sbjct: 298 ALSARPGRKTPQEPSRRE 315
>gi|229070823|ref|ZP_04204051.1| Transporter, drug/metabolite exporter [Bacillus cereus F65185]
gi|229080586|ref|ZP_04213106.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock4-2]
gi|228702687|gb|EEL55153.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock4-2]
gi|228712213|gb|EEL64160.1| Transporter, drug/metabolite exporter [Bacillus cereus F65185]
Length = 294
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 97/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 ELIDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|218782543|ref|YP_002433861.1| hypothetical protein Dalk_4715 [Desulfatibacillum alkenivorans
AK-01]
gi|218763927|gb|ACL06393.1| protein of unknown function DUF6 transmembrane [Desulfatibacillum
alkenivorans AK-01]
Length = 323
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 94/288 (32%), Gaps = 19/288 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ L +F A + WG++ + ++ LE + + +I R + +++ L
Sbjct: 37 LAYLAIFAAVLFWGLSFVASKIALETIPIFTLIFIRFFLAA------LLFTGIWLKTGFP 90
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L + + + S +++ L S PV + FLKE+
Sbjct: 91 RLLKKDWIKITLLSLFEPGLYFYCETKGLSLTSAPKASLIIATIPVFVLVAAVFFLKEKA 150
Query: 144 NHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ L + + + + I+ G L+ A+ AR
Sbjct: 151 SRLNFMGVAVSLAGIGILVAGGREIEWSLSGEMLGDALVFGAVIAASIYIIMARDLGLTH 210
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S+ + A F + L + F ++Y +
Sbjct: 211 SALTITGLQSLFAATLYLPAFIWEFPQVKWEGLTSHSLWALCYLVIFATCAAFFCWNYSL 270
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + S+ + P++ +++ +LK+ ++ + + +I + +
Sbjct: 271 TKIRASSASVFLNGIPVVTALAAWVLLKESLNAAQMSGGALTLIGVYM 318
>gi|89893074|ref|YP_516561.1| hypothetical protein DSY0328 [Desulfitobacterium hafniense Y51]
gi|89332522|dbj|BAE82117.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 315
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 88/274 (32%), Gaps = 10/274 (3%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ IL+G + + +S E++ R L + + + L N
Sbjct: 31 ITSLILFGFNGIVASHIS-LSSYEIVFTRTLIGSLFLVIVFGFSKQKMRFL----SNKSH 85
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
L S + W F A + + +Y+ PVI + L + KER+ ++I
Sbjct: 86 FLYLSLSGVAMGASWMFLYEAYTQIGVSIATLAYYCGPVIVMILSPLLFKERMTSAKLIG 145
Query: 151 ALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L ++ +L ++ + + L + S G M L
Sbjct: 146 FLAVLTGMLCVSGQAMSEEKTLFGLICGLLSAVMYAVMVIFNKKAVSITGLENSMWQLMA 205
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
++ G + + LI + + I + TV I Y
Sbjct: 206 SFATVFLFLGLKQDFSINIASGDWLPILILGIVNTGIGCYFYFSSIGLLPVQTVAICGYL 265
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
PL ++ S +L + + V+ + +++
Sbjct: 266 EPLSALLFSAALLGERLSLVQILGALLILGGAAF 299
Score = 40.7 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 46/112 (41%)
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S + I I +LF V+ GFS + FL N L+L G+ +
Sbjct: 46 HISLSSYEIVFTRTLIGSLFLVIVFGFSKQKMRFLSNKSHFLYLSLSGVAMGASWMFLYE 105
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +S + Y P+++++ S + K+ + + + I F V+ M+
Sbjct: 106 AYTQIGVSIATLAYYCGPVIVMILSPLLFKERMTSAKLIGFLAVLTGMLCVS 157
>gi|270294480|ref|ZP_06200682.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275947|gb|EFA21807.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 303
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 97/299 (32%), Gaps = 18/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G LF A ILWG+ + L + S L V + R++ + + ++
Sbjct: 2 NKNIQGHLFALTANILWGLMAPIGKSALVEFSALSVTTFRMVGAAACFWLLSLFCKREQV 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+D LK + + L + G +I+ L S P++++ + +++L
Sbjct: 62 DHRDMLK------IFFAALFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTMIVAAIYL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTI 188
KE + + +++ + + I+ + S G L LA +
Sbjct: 116 KEPVTNKKVLGIFVGAMGAFILIMSSQTTGAGNGSLIGDLLCLLAQISFSIYLTVFKGLS 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S M V A ++ + + + + +
Sbjct: 176 QKYSPITLNKWMFVYASMCYIPFSYHDVAAIQWSEISTAALLQAGYVVVGGSFLAYIFIM 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ ++ + + + I +V + + +
Sbjct: 236 SAQRLLRPTVVSMYNYMQPIVASTVAIILGLGVFNLEKGIAIALVFLGVYIVTQSKSRK 294
>gi|170703914|ref|ZP_02894590.1| RarD protein, DMT superfamily transporter [Burkholderia ambifaria
IOP40-10]
gi|170131179|gb|EDS99830.1| RarD protein, DMT superfamily transporter [Burkholderia ambifaria
IOP40-10]
Length = 299
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/295 (20%), Positives = 129/295 (43%), Gaps = 8/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G + A L+ + Y + L ++ L++ + R++W++PG I +L+
Sbjct: 9 RGIMLSVLASTLFALMSAYAKLLAPLTGLDIFAWRIVWTVPGALALIALRGRWPALVELV 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++++ + L SA +L + F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSVRDWRLPIALSVSAALLGLQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ LQ A L + + +L +A+ + Y R+ I S F +E+
Sbjct: 129 RLDPLQWAAVAFAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLVAFAVEI 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L AL V + S H + + L G G+L++ + + ++ G
Sbjct: 189 VLLCPVALAMVSTSATSVASH----PLLWAVLLPGLGVLSTLALASYLKASRMLPMALFG 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ Y P+L++ S+ +L + + + +G + +A+ + + + + ++
Sbjct: 245 ILGYVEPVLLVAVSLLLLGETLSVAQLATYGPIWVAVALTAWHSAMLMRRLPARR 299
>gi|86358547|ref|YP_470439.1| putative permease protein [Rhizobium etli CFN 42]
gi|86282649|gb|ABC91712.1| putative permease protein [Rhizobium etli CFN 42]
Length = 296
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 83/283 (29%), Gaps = 10/283 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G ++ A + G T + ++ + + + R +LP F + +
Sbjct: 2 SRQVQGYFYLALAMLTVGSTVIASKIIASGLPPFTATALRFALALPVFFLLMRASGARVP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + +++ + + I L PV++ + + L
Sbjct: 62 KLSSHDR----LILVIQAGAGSVGYTTLLISGLSLTSAADAGVIIGTLPVVAAAVSILVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTL-----HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ER ++A +L + + + L F + +
Sbjct: 118 RERPGRALLLAVVLASAGVFSIAFTPGATGGSLAGNLLIFLAVICEGLFILLNKRLTADI 177
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ ++ + + + + F ++ G +R
Sbjct: 178 APLAQSTLMTGIGFVFSIVPAIFEAPVHGFAESAAAAVVYYALVPTVGGFLLWYAGAERV 237
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + AP+ ++ + +L +PI V+ A+
Sbjct: 238 SGTEAALFTALAPVSAVMLAFVLLGEPIGFNHIAGIACVLAAV 280
>gi|317487021|ref|ZP_07945829.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
gi|316921703|gb|EFV42981.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
Length = 289
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 12/289 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M G L+V A +LW + +++ E ++ LEV R L F G
Sbjct: 6 KQMTGYLYVLAAAVLWSLIGPFSKICMEEGLAPLEVAFWRALLGGICFFAQTGICGGARI 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ A+ +F ++V + ++ + + P +
Sbjct: 66 PV------KHALFFCLFGVLSISVFFSSLQISIQLSGAAMAMVLLYTAPAWVAVFSRILF 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG----IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
E + + IA L + ++ G P + + S C+A +
Sbjct: 120 HESFSSRKGIALGLALFGTALVCFSGGSLNAEPSVLGIVCGLISGLCYASHFPFYVWWQP 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + A L + L + N + + ++
Sbjct: 180 RYSTATLYAYMLLGGALALFPFVDFAPTRSWTAWANLLALGVVTNYGAYLAYGRSLQSIN 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ P+L + +V+ A+ +
Sbjct: 240 QVKAAIIGNIEPVLATFWVWLFWNENFSAYGWAGSALVISAVFLLTADR 288
>gi|269963781|ref|ZP_06178099.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831514|gb|EEZ85655.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 313
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/310 (12%), Positives = 98/310 (31%), Gaps = 12/310 (3%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISH 58
M + S+ ++ +G +F +L+ I P++ + Q + +++
Sbjct: 1 MNTASDSSPSSEHQPQKKPVSAMTVGVMFALAGTLLFSIRPVFVKLAYQYGGDAVSIMTL 60
Query: 59 RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGF 118
R + SLP + + G + + LA + I AL
Sbjct: 61 RAMSSLPLYLCILFWMLRGSENRAKVKHHGIKAAAIGVLGYYLASYL--DITALNYISAQ 118
Query: 119 LTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----- 173
L F+ P V + + N + A L+ L + ++ H
Sbjct: 119 LERLLLFLFPTFVVLIMWFKEGQSPNRQVLSAVLVGYLGVGLIVAHDLSHYGEQIWLGGG 178
Query: 174 ---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
++ A + + + ++ FS + + N T
Sbjct: 179 LAILSAFVFAVYLVLSKASIAKLGSTMFTSIGMGSAGVAILIHLSFSSLQLSSMNNELIT 238
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ ++ + + + R + + ++ P + + ++FIL + +
Sbjct: 239 IGVLLGIFCTVIPSYLIAAAMARLNPAHLSLVSNIGPAMTALCAIFILDEAFTWFHALGI 298
Query: 291 GIVVIAMVVY 300
+ ++++V+
Sbjct: 299 VLTIVSVVMI 308
>gi|83643163|ref|YP_431598.1| DMT family permease [Hahella chejuensis KCTC 2396]
gi|83631206|gb|ABC27173.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Hahella chejuensis KCTC 2396]
Length = 308
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/291 (9%), Positives = 73/291 (25%), Gaps = 6/291 (2%)
Query: 28 LFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ A +WG + +E V + R + + ++ + K
Sbjct: 10 AMLIVAAAIWGFAFVAQVAGMEHVGPFTFNAARFVLGGLSLIPLLIILPRLQRVAPAKPK 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + L L F + ++ + +R
Sbjct: 70 AKGLLLGSCLAGFFLFAGASLQQVGLQYTTAGKAGFITGLYIILVPMFA-LCWGQRAEAK 128
Query: 147 QIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A L ++ L ++ I + A I +
Sbjct: 129 IWFGAALCVIGLFYLSVREDFTVSYGDSLQLIGAGFWAGHVLMIGWLSPRFNPLHISILQ 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + + + + + G + A + V I+
Sbjct: 189 FLVCGVVSWIVAFAVETPTWSGLWGASWSIAYAGFMSVGIAYTLQVIGQQHAPATRVAII 248
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ ++ +L++ +D G+++ M+V L + +
Sbjct: 249 ISLETVFAVLGGWLLLQEVLDEKAIYGCGLMLAGMIVSQLNFNRGRTRERK 299
>gi|328947733|ref|YP_004365070.1| hypothetical protein Tresu_0845 [Treponema succinifaciens DSM 2489]
gi|328448057|gb|AEB13773.1| protein of unknown function DUF6 transmembrane [Treponema
succinifaciens DSM 2489]
Length = 298
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/307 (10%), Positives = 88/307 (28%), Gaps = 20/307 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
E + L + G V A +WG + + L+ V +++ R + +
Sbjct: 1 MEKSELSIIFGAGLVLTAA-IWGFAFVVVKDSLDFVGPTWMVAIRFTIAAVCFGLFFI-- 57
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ N F +L + + +F ++ +
Sbjct: 58 ------KRFQHLNKDIFFHGCFLGVLLFLGYLTQTIGCNFTTAGKNAFLTTFYVILVPLI 111
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G K++ +AA + + + ++ L + + C + + +
Sbjct: 112 GWPVFKKKPGWYVWVAAAVALTGIGLLALDGDGAWYIMNRGDVLTLICGIFFALHIIAGS 171
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFL----------GNIPDTLFLIGYGLLNSFVF 244
F + V+ + + FL + L + F
Sbjct: 172 FFVKKEDVILLTFFQFAASGVLGFLTAPFLDGNFDVSLIKNSTVVVSMLYLGIFSSMVCF 231
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + G+K + + + ++ S L + + + ++ A+V+ +
Sbjct: 232 VLQNVGLKYVPSALASLFLSLESVFGVLCSCIFLGERLTLKMFVGCALIFCAIVLAEVIP 291
Query: 305 VINSGKN 311
+ K
Sbjct: 292 NLKQDKK 298
>gi|291280190|ref|YP_003497025.1| drug/metabolite transporter [Deferribacter desulfuricans SSM1]
gi|290754892|dbj|BAI81269.1| drug/metabolite transporter [Deferribacter desulfuricans SSM1]
Length = 299
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 95/294 (32%), Gaps = 9/294 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G+L + + ++ + +L+ + ++ +R L+ I+ + +
Sbjct: 7 KGSLLAIISSFCFATLAIFAKIGYLKGYNTNTLLFYRFLFGTIIFLLYILIKDRNILKIS 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ V ++ +TSF ++ P L ++ K R
Sbjct: 67 KQNLLLCFIVGFVLYGLQATFF----FLSVKLIGASMTSFILYMYPFTVTILAAIVYKNR 122
Query: 143 LNHLQIIAALLIILSLLIM---TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ + + A ++I L +L + ++ IPL+++++ +
Sbjct: 123 IDKISVFALIIIGLGILFIFYDVINFNIPLINVSMGILAMLTFTCYLLTVQKVLTKLNYY 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + F + + + + S + I+ S V
Sbjct: 183 TFTFYVLLFALFFYMVFGFNDIGTIAIKDLPFLFLLGLIPTSLGIILLYKAIQLIGSSYV 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I P ++ S + K+ I + I ++V +++ +I K K
Sbjct: 243 SIFSSIEPFATLLISFMLFKEKIGLFQFIGGILLVFGIILPNSYRIIYERKVKR 296
>gi|153853852|ref|ZP_01995208.1| hypothetical protein DORLON_01199 [Dorea longicatena DSM 13814]
gi|149753602|gb|EDM63533.1| hypothetical protein DORLON_01199 [Dorea longicatena DSM 13814]
Length = 300
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/283 (9%), Positives = 92/283 (32%), Gaps = 13/283 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T L + + WG + ++ + ++ +S L +++ R + +
Sbjct: 1 MSTKKANLILTTCSMAWGTSYIFMKLGIKGLSPLMLMALRTGIAFLILVLIFF------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ N + + + +L + +Y L T + F T V+ + SV
Sbjct: 54 -KRLLKVNKRLLLYSAITGFLLFTNLTPILYGLNTITASQSGFILSTTVVLVPVIHSVIS 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEG 195
+ H + +++++ ++++ + ++ + + +
Sbjct: 113 RRLPEHHVKLGIIIVLIGMVLINGGDIFAVKPGTLLCMLSAFSYSINIVLNSYFTRQVDP 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L+ ++ G F + L L +++ F + + +
Sbjct: 173 LALGVYQQGFTCLYSIIGLLVFGSPIFPSTALDWISVLGLALLSSAYGFVVQTVVQQYTT 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G + P+ + S L + + + + ++ +
Sbjct: 233 PENTGFLFSLEPIFAAIFSFIFLHEKLTEMGYLGAIFILAGVF 275
>gi|255693712|ref|ZP_05417387.1| putative membrane protein [Bacteroides finegoldii DSM 17565]
gi|260620529|gb|EEX43400.1| putative membrane protein [Bacteroides finegoldii DSM 17565]
Length = 303
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 95/298 (31%), Gaps = 15/298 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A +G+ PL+ + +SV V+ +R ++ + +
Sbjct: 2 NNKTKGFIYGAIAAASYGMNPLFALPLYAAGMSVDTVLFYRYFFAAIVLGILMKMQRQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K + + + + + + S FV PV+ + VF
Sbjct: 62 VLHKADVLPLVIM------GLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVAVIMGVF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
KE+++ + + + LL + + ++ G + L +++++ Y +
Sbjct: 116 FKEKISAITVFSILLALSGIALLYQGDGDKPLSTLGIIFVLLSSLSYAIYIVGVNRSTLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y+V F L L + + I
Sbjct: 176 NLPTTKLTFYAILFGLSVYIVRLNFCMELQVIPSTWLWADTLALAILPTAISLVCTALAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ P+ + V + + + + +++ A+ + ++ +
Sbjct: 236 HYIGSTPTAILGALEPVTALFFGVMLFHEKLTPRLMVGILMIITAVTLIIIGKSLIKK 293
>gi|300853846|ref|YP_003778830.1| putative permease [Clostridium ljungdahlii DSM 13528]
gi|300433961|gb|ADK13728.1| predicted permease [Clostridium ljungdahlii DSM 13528]
Length = 304
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 92/296 (31%), Gaps = 11/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ M G L V A +LWG++ Q+L + +S ++ R+L S + + Y
Sbjct: 8 KNNSRMKGILLVVSASMLWGVSGPVAQYLFQKKDISPEWLVDIRLLLSGSLLLIFL-YLK 66
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + ++ FS L + ++ + +++PVI V
Sbjct: 67 NGKKIFNIWKSKYGRRNIIFFSIIGLIGVQYGYFASIKYGNAATATILQYLSPVIIVCYV 126
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
S KE + ++ LL +L ++ L + ++A + + +
Sbjct: 127 SFKSKELPTLRETLSILLALLGTFLLITRGNIHSLAISNLALFWGVLSAFAAAFYVVQPV 186
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G I + + + + F +
Sbjct: 187 YIIKRWGCDIVIGWGMLLGGIFFSFVHPFWRIQGEYSTDSILAITFVVVFGTLVSFYWYL 246
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ K S ++ P+ S+ L P I +++ +++
Sbjct: 247 DSTRYIKASETSLLSCLEPMSATTVSILWLHTPFGIFDIIGSILILSTVLILSYNK 302
>gi|330958931|gb|EGH59191.1| hypothetical protein PMA4326_10285 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 295
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 79/288 (27%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLS 79
+ G F+ A L+ +++L + ++ R L + + +G
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYLVHTLLMACIFMPSAGLRV 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + ++L FI + + L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATAVNFLAPL------LVTALSVPLL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ Q IA ++ + ++I+ G + SA CFA + F
Sbjct: 126 HERVTRGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSP 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + + + + FL+ G + + + A + +
Sbjct: 186 TTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAML 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 246 APFSYCQIVFAGLLGFLVFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|268320067|ref|YP_003293723.1| putative permease [Lactobacillus johnsonii FI9785]
gi|262398442|emb|CAX67456.1| putative permease [Lactobacillus johnsonii FI9785]
Length = 304
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/305 (12%), Positives = 99/305 (32%), Gaps = 16/305 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 3 KQSKSRLWTVLAALAAVMWGISGLFAESLFKVSSKITPIWLTQIRLIISGIVLLIIATVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ ++ + L F+ A+ + + F+ P +
Sbjct: 63 --HQKPFSVLKDKKNTLHIIAYGIFGLLPVQVFYFIAIEMANASIATILQFIGPFFVLTY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARK 186
+V ++ L L ++AA+L + + +++ H LL ++ A
Sbjct: 121 LAVTHQQVLRRLDVLAAILAFIGVFLLSTHGNFNQLAITPLALLFGLLSALGEASYTLIP 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
V + + + + ++ L + F I
Sbjct: 181 VKLVKRVSSLVVTGWGMLLAGIGLILVYPQFPSIPNTL--RVWLDVSAIIIIGTIIPFQI 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ K S V +++ PL V SV + + + + +V+ +++
Sbjct: 239 MANALRYVKPSNVSLLDAFEPLSATVGSVLVFGLVMSGMDWLGTFLVIGSVLALNFTPKR 298
Query: 307 NSGKN 311
N K
Sbjct: 299 NIKKK 303
>gi|229168118|ref|ZP_04295846.1| Transporter, drug/metabolite exporter [Bacillus cereus AH621]
gi|228615362|gb|EEK72459.1| Transporter, drug/metabolite exporter [Bacillus cereus AH621]
Length = 295
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 96/295 (32%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + S ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIISFVVLYVILKTTEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALLL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLIITTYAIFFSLFFITPFMVWEFQTNPIEHMNMYVVLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ S + + P++ + +L + + + I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSILGWLLLNETLSSNFFIGGILIICSVIITTFEKQK 295
>gi|23500409|ref|NP_699849.1| hypothetical protein BRA0666 [Brucella suis 1330]
gi|161620722|ref|YP_001594608.1| hypothetical protein BCAN_B0666 [Brucella canis ATCC 23365]
gi|225629150|ref|ZP_03787183.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254699894|ref|ZP_05161722.1| hypothetical protein Bsuib55_03412 [Brucella suis bv. 5 str. 513]
gi|254703016|ref|ZP_05164844.1| hypothetical protein Bsuib36_03578 [Brucella suis bv. 3 str. 686]
gi|254705842|ref|ZP_05167670.1| hypothetical protein BpinM_02245 [Brucella pinnipedialis
M163/99/10]
gi|254711071|ref|ZP_05172882.1| hypothetical protein BpinB_12592 [Brucella pinnipedialis B2/94]
gi|254712467|ref|ZP_05174278.1| hypothetical protein BcetM6_03611 [Brucella ceti M644/93/1]
gi|254715540|ref|ZP_05177351.1| hypothetical protein BcetM_03642 [Brucella ceti M13/05/1]
gi|256015438|ref|YP_003105447.1| hypothetical protein BMI_II663 [Brucella microti CCM 4915]
gi|256029452|ref|ZP_05443066.1| hypothetical protein BpinM2_02155 [Brucella pinnipedialis
M292/94/1]
gi|256059142|ref|ZP_05449351.1| hypothetical protein Bneo5_02125 [Brucella neotomae 5K33]
gi|260167456|ref|ZP_05754267.1| hypothetical protein BruF5_03547 [Brucella sp. F5/99]
gi|260568055|ref|ZP_05838524.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261217277|ref|ZP_05931558.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261313269|ref|ZP_05952466.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318661|ref|ZP_05957858.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261320148|ref|ZP_05959345.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261323094|ref|ZP_05962291.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261750370|ref|ZP_05994079.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753627|ref|ZP_05997336.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261756869|ref|ZP_06000578.1| drug/metabolite transporter superfamily protein [Brucella sp.
F5/99]
gi|265986461|ref|ZP_06099018.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|23464030|gb|AAN33854.1| membrane protein, putative [Brucella suis 1330]
gi|161337533|gb|ABX63837.1| protein of unknown function DUF6 transmembrane [Brucella canis ATCC
23365]
gi|225615646|gb|EEH12695.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|255998098|gb|ACU49785.1| hypothetical protein BMI_II663 [Brucella microti CCM 4915]
gi|260154720|gb|EEW89801.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260922366|gb|EEX88934.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292838|gb|EEX96334.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297884|gb|EEY01381.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261299074|gb|EEY02571.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302295|gb|EEY05792.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736853|gb|EEY24849.1| drug/metabolite transporter superfamily protein [Brucella sp.
F5/99]
gi|261740123|gb|EEY28049.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743380|gb|EEY31306.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|264658658|gb|EEZ28919.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 305
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 92/285 (32%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F +Y + ++ +FL+ +S E+ + + + F+
Sbjct: 2 LYGILLAFASYAAFAVSDACVKFLDGTLSPYEIAFY-----GAVLGLLAIPFTKKADDAW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L +FLKE+
Sbjct: 57 LDMFRTGNIKMWLLRTVTAAMGVIGSVAAFTYLSMAEAFALIFLLPAYVTILSVIFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L++ L + + A I + +
Sbjct: 117 VGWRRWSAVAIGFAGVLVVLRPGFRELSIGHLGALAAGMGGATSIIIFRVMGKNEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G + ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLVGPILICGALMAPSYQAPGTMQWVYLAGYGLLAALANILLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ ID I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDMPMLIGIVLITISGLFTFIRERQR 281
>gi|56421812|ref|YP_149130.1| hypothetical protein GK3277 [Geobacillus kaustophilus HTA426]
gi|56381654|dbj|BAD77562.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 310
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 92/300 (30%), Gaps = 15/300 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG+ + L E S + + + R+L + V + + +
Sbjct: 7 YALLVAIMVAWGLNVTALKILVEHFSPVALTALRILTAGLVVLLFLWGIGKLQKVSWNEA 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + A + L + P+++ L VFL +R
Sbjct: 67 KQIGLAALFSVVAHHFFLA-----LGLARTTAVNAGLVLGMVPLVTALLAIVFLGQRPTL 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+++ L ++ + + L L+I + + I + +E V+
Sbjct: 122 FRLLGIALGFFGVVFVVANGDGGLGHLSIGDVYIFLAVLAQGISFIMIKKATVEARVMTG 181
Query: 206 PALFYVVWNGFSGGEHFFLGN---------IPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + F +FL + + ++ ++
Sbjct: 182 WMLVFGSLWLFVLSLVLEPSGLSSLKEGTLPLWLIFLASAVVATALGHMFYNQAVQHLGP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + PL ++ + ++L +PI ++ F +V ++ + + K+
Sbjct: 242 AESAVFINLNPLFSLLGAHWLLGEPISWMQLAGFLFIVAGVMFGSGGMDDVIARFRRAKA 301
>gi|331000348|ref|ZP_08324029.1| putative membrane protein [Parasutterella excrementihominis YIT
11859]
gi|329572144|gb|EGG53809.1| putative membrane protein [Parasutterella excrementihominis YIT
11859]
Length = 308
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 99/294 (33%), Gaps = 10/294 (3%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFF 69
K ++ + +G LF + I +G+ P++ + +S +E++ R ++++ +
Sbjct: 3 KAVNTKQVQPLVALGILFSLLSAITYGLNPIFAKLAYSCDLSGIEILHARFIFAVVVLGL 62
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ +L L+ + ++ +YAL + S +V P+
Sbjct: 63 MGPFLQKDFYRFSRSLIRKSLFIGLLILLPLNLLY----VYALKDIPASMMSLITYVYPL 118
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
I + + + + + QI++ I+L L + + ++ F
Sbjct: 119 IILAINGLIFHKSIRANQIVSITFILLGCLCIFSDAFKANITYTALGLGFLSTFMYAVYL 178
Query: 190 VG----SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ ++ ++ L + + + + +
Sbjct: 179 LSLQQLATNVSAYQITFLTLLFSTIGLCFLHNPLFILRFDAMQLGTTFGYGVVSTVLSTI 238
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S ++ + GI P+ I + +L + I R + +++ +V+
Sbjct: 239 CVSRAVQLLGATQAGIFCSFEPVFTIGFAALLLGESIPAFRLVGMVFLILGIVI 292
>gi|324991323|gb|EGC23256.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis SK353]
Length = 352
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/293 (10%), Positives = 78/293 (26%), Gaps = 6/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ A + I+ +++ L V+ + + L + GV ++
Sbjct: 3 KQKTKTSAVILALLAAGFYAISTPFSKVLLNNVTPTFIAAFLYLGAGIGVGIMYLFHIKK 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + + F I + S V + + +
Sbjct: 63 EKKSERLTKQDLPYTIGMIGLD--IAAPIFLIIGIKMGTASNASLLGNFEIVATALMALL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSE 194
F KE+++ IA I LS ++++ + S+
Sbjct: 121 FFKEKVSRNLWIAIGFITLSSIVLSFEGSDSFQFSIGSFFVILATCCWGLENNCTRKMSD 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
E+ +L + ++ + ++ +
Sbjct: 181 KSTYEIVLLKGIFSGGGSFTIALLLGEKIPEMKYIAEVMLLGFVAYGLSIFLYIRAQRDL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ AP + + I + + I ++++ V + T+I
Sbjct: 241 GAAKTSSFYAVAPFVGSFLAFAINGEKLALEYFIGLTLMLLGTVFVVYDTMIK 293
>gi|254720355|ref|ZP_05182166.1| hypothetical protein Bru83_12665 [Brucella sp. 83/13]
gi|265985372|ref|ZP_06098107.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837450|ref|ZP_07470326.1| transporter, DME family [Brucella sp. NF 2653]
gi|264663964|gb|EEZ34225.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306407493|gb|EFM63696.1| transporter, DME family [Brucella sp. NF 2653]
Length = 305
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 92/285 (32%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F +Y + ++ +FL+ +S E+ + + + F+
Sbjct: 2 LYGILLAFASYAAFAVSDACVKFLDGTLSPYEIAFY-----GAVLGLLAIPFTKKADDAW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L +FLKE+
Sbjct: 57 LDMFRTGNIKMWLLRTVTAAMGVIGSVAAFTYLSMAEAFALIFLLPAYVTILSVIFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L++ L + + A I + +
Sbjct: 117 VGWRRWSAVAIGFAGVLVVLRPGFRELSIGHLGALAAGMGGATSIIIFRVMGKNEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G + ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLVGPILICGALMAPSYQAPGTMQWIYLAGYGLLAALANILLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ ID I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDMPMLIGIVLITISGLFTFIRERQR 281
>gi|294678284|ref|YP_003578899.1| hypothetical protein RCAP_rcc02763 [Rhodobacter capsulatus SB 1003]
gi|294477104|gb|ADE86492.1| protein of unknown function DUF6, transmembrane [Rhodobacter
capsulatus SB 1003]
Length = 316
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 92/297 (30%), Gaps = 3/297 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + +++ + L V E + R L+++P + +++
Sbjct: 13 NPVTGITLKILSVLVFIAMSTVIKVLAPHVPPGETVFFRSLFAIPVILAWLLWRRELSVG 72
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK + ++ + G L + ++FLG
Sbjct: 73 LKVRQPMGHVWRGVAGTSAMGLGFAGLAFLPLPEVTALGYAAPLLTVIFAAMFLGEEVRA 132
Query: 141 ERLNHLQI--IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
RL+ + + I L+++ L A+ V A A + +
Sbjct: 133 FRLSAVTLGLIGVLIVLWPRLGSFESGNPTATLGAMLVIMGATFAALAQVFIRKMVATER 192
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ ++ + S + + + LI G+L + + + A S
Sbjct: 193 TSAIVFWFSVTSTGLSLISLPFGWVVPTPYEATLLISCGILGGIGQILLTSSYRFADASI 252
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V EY + L + ++ + G+++ A V+ + + + +
Sbjct: 253 VAPFEYVSMLFALGIGYWMFAEVPTVWMLGGAGLIIAAGVMIIWRERRLGLERQRAR 309
>gi|309778169|ref|ZP_07673104.1| integral membrane protein domain protein [Erysipelotrichaceae
bacterium 3_1_53]
gi|308914078|gb|EFP59883.1| integral membrane protein domain protein [Erysipelotrichaceae
bacterium 3_1_53]
Length = 306
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 97/292 (33%), Gaps = 20/292 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G ++WG T + T+ L ++ L+++ R + ++
Sbjct: 2 NERIRGHALACMTILIWGTTFISTKVLLRDITPLQILFTRFMIGYLALWAVC-------P 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-SVF 138
L + + + L + +++ AL Q V+P ++F G +
Sbjct: 55 RLTKIRRKKEELYFLAAGLCGVTLYFLMENIALTYTQASNVGIIVAVSPFFTMFFGIWLL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFARKT 187
+ R I L+ + +L ++L L + +S +
Sbjct: 115 KQRRPGVRFFIGFLIAMTGILCISLEGSQRLQLNPKGDLLALGAAAVWALYSTITKKISS 174
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + L ++++G L + L ++ F +
Sbjct: 175 FGYTTIPMTRRIFFYGLLCMLPVILFSGMKLPAMEQLTMVNIANILFLGLGASALCFVSW 234
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ + Y P++ ++SV+ILK+ + + +++ +++
Sbjct: 235 NSAVRILGTVQTSVYIYAVPVVTTLASVWILKETVTVIGIAGIVMILSGLLM 286
Score = 38.0 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 38/143 (26%), Gaps = 1/143 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
A+A + + Y+ +
Sbjct: 8 HALACMTILIWGTTFISTKVLLRDITPLQILFTRFMIGYLALWAVCPRLTKIRRKKEELY 67
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ-PIDTVRTIVF 290
FL + F + + + + S VGI+ +P + +++LKQ I F
Sbjct: 68 FLAAGLCGVTLYFLMENIALTYTQASNVGIIVAVSPFFTMFFGIWLLKQRRPGVRFFIGF 127
Query: 291 GIVVIAMVVYLLPTVINSGKNKT 313
I + ++ L N
Sbjct: 128 LIAMTGILCISLEGSQRLQLNPK 150
>gi|298290895|ref|YP_003692834.1| hypothetical protein Snov_0891 [Starkeya novella DSM 506]
gi|296927406|gb|ADH88215.1| protein of unknown function DUF6 transmembrane [Starkeya novella
DSM 506]
Length = 311
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 95/294 (32%), Gaps = 9/294 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
ASL G L + ++ +++ L + E+++ R + + + + +
Sbjct: 3 ASLANRRGILLMIAGSSVFASNDAFSKLALAHIPPSEILAVRGVMAALMLVAFLGWKGQL 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
SL K +L I A+ T + V P++++ +
Sbjct: 63 ASLRHCADKRVLLRAAAEACVAMLF------ITAITTMSIADATSILQVVPLVTMAAAVM 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F R++ +A L + ++ A+ A+ + + G
Sbjct: 117 FFGARISRSLWVAVAAGFLGVTLIVKPGSSAFDFTALLPLGCAFLISFRDFVTGRIGAHV 176
Query: 198 IE-MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + ++ S E + ++ +L+G + + +
Sbjct: 177 PTLVVTATTAGIGMMMGFAGSTVEQWAALDLWTFGYLVGGSVTLIAGHMLTIAAFRGTDP 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
ST+ Y + + S + Q D V +++ A +Y + +++ K
Sbjct: 237 STISPFRYAGVVCSVALSATLFHQMPDLVSIGGIALILAA-ALYTMHQHMSAPK 289
>gi|297526251|ref|YP_003668275.1| protein of unknown function DUF6 transmembrane [Staphylothermus
hellenicus DSM 12710]
gi|297255167|gb|ADI31376.1| protein of unknown function DUF6 transmembrane [Staphylothermus
hellenicus DSM 12710]
Length = 285
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 87/282 (30%), Gaps = 8/282 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + ILWG + + L V+ + R L S + I+++ +
Sbjct: 6 SSILKHYLALLGTVILWGTSFPVIKILVSNVNEYTYVWVRGLLSTVFLTPLILHYISKKN 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ +K G+ S V+ V L +
Sbjct: 66 VSRECVKGGLLAGIFYGLGLFFQG-------WGTAYTTASNSAFITGLNVLFVHLIIASM 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+R + + + IL L +++ + I L + + + + + S+
Sbjct: 119 YKRYSIRLFASLVSGILGLYMLSSPTTIGRLGDFLVLIGAVMWALQIIVFDKYSKCNPFI 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + F+ + F + +YG K+ T
Sbjct: 179 LVYFMFIPTQTFILFDPAPISILETRINVLLGFIYLAIFCSIGAFALQAYGQKKVPPETA 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P+ + + L + + + I +++++M +
Sbjct: 239 ATIFLLEPVFASIFAYLFLGETLGFKQLIGASLILLSMYLAS 280
>gi|84515311|ref|ZP_01002673.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
gi|84510594|gb|EAQ07049.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
Length = 304
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 95/289 (32%), Gaps = 8/289 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L++ +++ + + + V + R + L + I
Sbjct: 12 NPVAGVLWMVLTGVMFVAVTAIVKHVGDDVPAAQAAFLRYVLGLVFLLPMI-------RP 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + M + A+ + YA+ + +++PV ++FL
Sbjct: 65 IMAARLTGRQIKMFAIRGVVHALAVILWFYAMARLPIAEVTAMNYLSPVYVSIGAALFLG 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+L ++IA LL ++ I+ + S IA+ +A FA + G
Sbjct: 125 EKLPPRRLIAVLLALVGAAIILRPGVKAVESGHIAMLGTAVLFAVGYLLAKRLSGEVSAA 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ + ++ + + I +L+ + + A L+
Sbjct: 185 VVVGMLSITVTIGLAPFAYAVWVTPTIAQLGWLLLVAFFATAGHYTMTLAFAVAPLTVTQ 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + +V + + +D + +++ ++ +
Sbjct: 245 PVTFLQLVWAVVLGAVVFGEAVDGWVVVGGLVIMASVSFITWREAVARR 293
>gi|329934403|ref|ZP_08284482.1| putative integral membrane protein [Streptomyces griseoaurantiacus
M045]
gi|329305999|gb|EGG49854.1| putative integral membrane protein [Streptomyces griseoaurantiacus
M045]
Length = 324
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 90/294 (30%), Gaps = 13/294 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A +LWG +V + + R++ + L L+ L+
Sbjct: 1 MLGAALLWGTVGPAQGLAGEVMNPAALGGWRLVVGGAVLALLC---RRHLRGLRPVLRRG 57
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+LV + F T T + V PV + + + E L
Sbjct: 58 LVRPLLVCALATGVFQAAFLYATARTGAALATVVALGVAPVATGVIARLVTGEALTRTWA 117
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVGSSEGFFIE 199
++ +L ++ + G + + V + Y + +
Sbjct: 118 LSTAAAVLGCALLFVPDGAGRAEVDVLGLLTATASGVCYGLYTVYARRLATDHPGVHLPT 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ LA+ + +G L + + +FS G++ + V
Sbjct: 178 VSALALLLGSVPLLPWMAGSVTALARPAALGLVAWLGLAATALAYWLFSVGLRTTGAAAV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
G + PL V VF+L + + I +++ +V+ LP + +
Sbjct: 238 GTLSLAEPLAATVLGVFVLHEHLTATAAIGSLLIMGGLVLACLPAAASPAPARR 291
>gi|324326652|gb|ADY21912.1| DMT family permease [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 303
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 89/285 (31%), Gaps = 13/285 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKLNGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGDSIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P++ + L + + + I ++ +++ + ++
Sbjct: 250 LTPVIACFIAWVWLGEVPTFISVVGGVITILGVLIAHVSLKKDTR 294
>gi|291486350|dbj|BAI87425.1| hypothetical protein BSNT_05757 [Bacillus subtilis subsp. natto
BEST195]
Length = 344
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 95/295 (32%), Gaps = 16/295 (5%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV A WG T E + L + R+L + A+ +K
Sbjct: 56 LFVLIAAFFWGTTGTVQALAPESATPLAFGAFRLLIGGSAMLLAVWISRE------LHVK 109
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + + + FF T T + P+I+ L LK+R +
Sbjct: 110 NWSWPLVFLAAVCMACYQPLFFTAVKETGIAVGTVIAIGSAPIIAGTLEWAVLKKRPRNS 169
Query: 147 QIIAALLIILSLLIMTLHSGI-----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
IA +L + ++ S + +A+ S + + + ++
Sbjct: 170 WWIATVLALTGCWLLFSDSSNVRIDVAGVLMALGAGASFAGYTLISKAMMKTQPPRATSA 229
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ + + + + + L + + +F+ G+ S
Sbjct: 230 VVFMISAILLTPLLWQSDISWIWTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAVT 289
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ PL + VF + + + + ++++ ++V K KT ++
Sbjct: 290 LSLAEPLTASLLGVFFIGEMLSPFSWLGIALMMLGLLVISAAP----RKQKTAEA 340
>gi|304386699|ref|ZP_07368972.1| probable permease [Neisseria meningitidis ATCC 13091]
gi|261391946|emb|CAX49408.1| putative transporter [Neisseria meningitidis 8013]
gi|304339214|gb|EFM05295.1| probable permease [Neisseria meningitidis ATCC 13091]
Length = 303
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 87/283 (30%), Gaps = 8/283 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+MG A +L ++++ L + +SV + + L + + +
Sbjct: 7 LMGIFLAVSAALLNATIGIFSKILMEQGLSVQHIAFLKTLTGFVFISILLCRTGFTRQIA 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLT-----RQGFLTSFSYFVTPVISVFLGS 136
+ K + +L+ A + T + V ++ L S
Sbjct: 67 DISRKKEAILPLLLKVAICAFFGIYTLFFFETTAYQYGNAANVVVVLMASAAVSALILDS 126
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ L ER+ ++ L +L + +++ G L L A+ S Y I G
Sbjct: 127 ILLDERICISSVVGVGLAVLGIAMISWTGEGSLGLILNAALAGSGYGCFSVLIKKFGLNG 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L ++ G E L L F + +
Sbjct: 187 GIYLTRILMFFGSIFLFIPSLEGIEDIHWQWSFIPPLLALSLLPTILGFYCTTKALDYLS 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ V + E PL V + L + + + +++ +V
Sbjct: 247 AAKVQVTELAEPLFAAVLAWLFLNEIPEGRFFVGAILIIAGIV 289
>gi|253583373|ref|ZP_04860571.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251833945|gb|EES62508.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 298
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/292 (8%), Positives = 91/292 (31%), Gaps = 12/292 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
L + A +LWG L+++ + +++ R ++S+ + + L+
Sbjct: 10 YLLIILAAVLWGGIGLFSKTAGNIGFTPIDICFIRSVFSVIILGIFFFIKDRSIFKLESI 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +++ +I A+ + + + P I + L ++ E++
Sbjct: 70 ---KDLKYFIGTGIISFSLYNWSYIAAIKETSMGVAAILLYTAPSIIMVLSAILFNEKIT 126
Query: 145 HLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+++ A ++ + +++T + ++ +
Sbjct: 127 KVKLAALVITFVGCMMVTGIFEGGNIISVRGFVYGILSGIGYGLYSIFGKYALRKYSSVT 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + + +++ G+ + + S
Sbjct: 187 VVFYTFLMSGFLFSILGSPFIIIEKINNTSSWIFITAFAAFSAAVPYILYTKGLSKIEAS 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ P++ + + I + ++ +V+ A+ + L
Sbjct: 247 KASILANIEPVVAAIIGIIIFSEGAGILKLFGIFLVIAAVCMINLSESFEKK 298
>gi|119383458|ref|YP_914514.1| hypothetical protein Pden_0706 [Paracoccus denitrificans PD1222]
gi|119373225|gb|ABL68818.1| protein of unknown function DUF6, transmembrane [Paracoccus
denitrificans PD1222]
Length = 319
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 89/285 (31%), Gaps = 6/285 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + +++ +++L S + VI R + V GGL +
Sbjct: 36 ILLICASALIFAAQDGISRYLGAAYSPIFVIMLRFWFFAVFVILLCARAPGGLGRAMRSK 95
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +F +L + A + T + P++ L FL E++
Sbjct: 96 R----PWTQIFRGVLLVAEVVVTVEAFVRLGLINTHAIFACYPLLISALSGPFLGEKVGW 151
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +A + +LI+ + A+ A FA + M
Sbjct: 152 RRWVAVAVGFAGILIVLKPGSGVFSADAVLPFVGAAMFAVYGLLTRLVGRDDPAMVSFFW 211
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ V G H+ D +L+ L + + A+ S + YT
Sbjct: 212 TGIAGAVAITLVGVWHWEPIAGRDIPWLLLLCLTAVVAHFMLIKAYELAEASALQPFSYT 271
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + V I + + I ++V+ ++ +
Sbjct: 272 QLVWVSIFGVVIFGETLAPNVAIGG-LIVVGAGLFTWWRARQRER 315
>gi|317487166|ref|ZP_07945967.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
gi|316921567|gb|EFV42852.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
Length = 303
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 89/298 (29%), Gaps = 2/298 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S P G L + + + T E + + + R+L + +
Sbjct: 1 MSTPFARGPLLILLGALCFSTTGTVQALSPEGATPYVIGALRMLVGGLALLLWCAFRGEL 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ ++ + + G + FS V ++ +
Sbjct: 61 PRFWRWPMRCVVPSTLAL-LGFQFFFFRGVLEAGVAVGTVVAIGFSPIVVALLGLIFLRE 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ +A + +IL + ++ + +S C+ + P+ +
Sbjct: 120 KPAKAWYPATGLALIGLILLNADAVGGASFAGMAFPLLAGFSYACYFVFSKPLAQNAAPG 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M VL + + ++ + + + + L + + F + G+K +
Sbjct: 180 SVMMVLCLLSGLCMLPVFWIYPAAWLATPVGALVALHLGVVTTAIAFSLTLAGLKVTPAA 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
T + PL +F L +P+ + ++ ++++ + + +
Sbjct: 240 TASTLSLAEPLSAACLGIFFLHEPLSLSAAVGIALIFGSVLILVACPSGQPPRESAAR 297
>gi|116050615|ref|YP_790566.1| hypothetical protein PA14_30130 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585836|gb|ABJ11851.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
Length = 296
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 96/296 (32%), Gaps = 8/296 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S+ G + + + + + + V+ V+ R L + +
Sbjct: 6 SQPQRRNSPTQGAAMLALSALFFALMGGLIREASSTVNNETVVFFRNLVGVLFFLPLALT 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + L + T + YAL + PV +
Sbjct: 66 RGIGPLRTRRPLSHLLR-------TTYGLGGMYCYFYALAHLPLTDAMLFSYAAPVFTPL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +++KE L ++A L+ L +L++ SG + +A+ S+ A + +
Sbjct: 119 IAHLWIKEPLTRRMMVATLVGFLGVLLVARPSGAVVAPIALVGIASSLMAACAFVSIREM 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ ALF +++ + N + L L+G GL S S
Sbjct: 179 SDSEPAYRIVFYFALFGTLFSAVPLAWAWQPLNGRELLLLLGAGLFASLGQLTMSQAYAL 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +G + Y A + V + ++ + ++ A ++ LL
Sbjct: 239 ASPGVIGPIAYMAIVFAGVIAWLRWEELPSHTSLLGAALIFAASLIPLLGNRPAER 294
>gi|104774748|ref|YP_619728.1| putative permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
gi|103423829|emb|CAI98857.1| Putative permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
Length = 303
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 96/298 (32%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L LWG + + L Q ++ ++ R + + + G
Sbjct: 6 LGILLAITGAALWGTSGTAAEMLYQSPNINTFWLVDVRSWLAGASLLLISLVHKG-KGTF 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + +FS + + Y + + F+ PV+ + + ++
Sbjct: 65 AIFKNHRDLLYAALFSMLGITGAQFTYFYTVAASNAPTATVLVFLAPVLIICFMAAKTRQ 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF----- 196
+ +IA LL ++ +++ + L++ + A +
Sbjct: 125 MPRRIDLIAVLLAVVGTVVLVTNGNFSHLAVTPKTLVWGFFSALTQALAIAMPAKLFKKY 184
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + ++ + + +L + F + ++ +
Sbjct: 185 GTITILAWGMLLGGIILSPALAVMPATGVTVKEWSLVIYIVIAGTVFAYSLYLSSVMYIS 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V ++E PL+ + SV +L ++ ++++A + ++P+ +
Sbjct: 245 AGLVSMLEAFEPLVATILSVTLLGSDFGIMKMAGGVLIILATCLQVVPSPRRGKLQRK 302
>gi|118580415|ref|YP_901665.1| hypothetical protein Ppro_1999 [Pelobacter propionicus DSM 2379]
gi|118503125|gb|ABK99607.1| protein of unknown function DUF6, transmembrane [Pelobacter
propionicus DSM 2379]
Length = 293
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 83/289 (28%), Gaps = 19/289 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV-YFSGGLSLLKDT 84
+ + + ++W + + L V + + R +L + LL+
Sbjct: 8 YILLVLSSLIWSGNFVVGRGLRGAVPPISLAFWRWAVALAILLPLSWPILRRQWPLLRRN 67
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ G+L + + AL + PV L +F + L
Sbjct: 68 WRLLALNGLLGVAGFNTLL-----YIALQSTTATNALLIDSTIPVFIALLSWLFGEGALT 122
Query: 145 HLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
Q++ L+ + ++ + + G + LA+ R+
Sbjct: 123 RRQLLGVLVSLAGVITIICRADVRSLVSFQANRGDLWVLLAVVCWALYTVLLRRLPDGAH 182
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G M ++ + L + G L + F +++ +
Sbjct: 183 PLGVLTVMVMVGLLGLAPFYFWELGQGGRVLLTAPVVVGLAYVGLFASVLAFIMWNRAVV 242
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + G+ + PL + SV L + ++ + +
Sbjct: 243 QVGANRAGLFVHLMPLFGTILSVLFLGESFHLFHLSGMALIFSGIYLTT 291
>gi|328957931|ref|YP_004375317.1| putative transporter [Carnobacterium sp. 17-4]
gi|328674255|gb|AEB30301.1| putative transporter [Carnobacterium sp. 17-4]
Length = 299
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 98/279 (35%), Gaps = 14/279 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
V A +L+G L + +E ++ E+ +R + + +++ K
Sbjct: 8 VVIAMLLFGSIGLMVKNIE-LTSSEIALYRGVLGSLFLLVFMLF----KRNKVSYGLLKK 62
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+L FS T + ++W A + SY+ PVI + + LKE+ +
Sbjct: 63 NAVVLFFSGTAIGLNWILLFEAYNYTTISNATLSYYFAPVIVMVVSPFLLKEKWMLNKAG 122
Query: 150 AALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ LL ++ + ++ + + + + M
Sbjct: 123 SILLAMVGMFLVVGTNNQSSMGHTHSVGIFYGLGAAILYASVMMLNKFIKDLTSLESTMI 182
Query: 202 VLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + ++ + F+ G + +I + + ++ +++ K TV
Sbjct: 183 QLMVASVVLAPYVFFTQGFDVVGITITSIPYLIILGIVHTGLAYVLYFSAMQKLKSQTVA 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ Y P+ +V S L + + ++ +++ + +
Sbjct: 243 LLSYIDPVAAVVMSALFLGEAMSGIQIFGGLLILSSTFI 281
>gi|124025646|ref|YP_001014762.1| integral membrane protein, DUF6 [Prochlorococcus marinus str.
NATL1A]
gi|123960714|gb|ABM75497.1| Integral membrane protein, DUF6 [Prochlorococcus marinus str.
NATL1A]
Length = 302
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 98/304 (32%), Gaps = 15/304 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
L+ + G F+ + + + + + + + + E++ R S+
Sbjct: 6 LTNKLNIEKNFKGIRFLIGSGFAFSLMTVCVKGIGGRIPISELVFARATISIII------ 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + +L+ + V AL + ++ P +V
Sbjct: 60 --TRFYLYKNNINPWGYQKRLLIIRGLLGTVALFCIFKALTILPIATATVIQYIYPTFTV 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARK 186
+ LKE + + + ++ + +++++ ++ I + A +
Sbjct: 118 ICAYIILKEFIFRRIVYSIIIGWIGIVLVSQPEFTSNSNIQETILAIIIAIFGALMTSLA 177
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
I V + ++ L + + F L + D +IG G+
Sbjct: 178 YICVRKLSSKEHPLVIIYYFPLVSIPLSIPFIINDFVLPSGTDWFLIIGIGIFTQIGQLC 237
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ G++ + Y+ + + V I ++ I + I V+I+ ++ + +
Sbjct: 238 ITEGLRLLPAGQATSLNYSQVIFACIWGVLIFQETITSSIYIGGFCVLISTIISMSASKR 297
Query: 307 NSGK 310
K
Sbjct: 298 TQSK 301
>gi|120601347|ref|YP_965747.1| hypothetical protein Dvul_0297 [Desulfovibrio vulgaris DP4]
gi|120561576|gb|ABM27320.1| protein of unknown function DUF6, transmembrane [Desulfovibrio
vulgaris DP4]
Length = 300
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 84/283 (29%), Gaps = 16/283 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A +LW + + + L + +I R+ + + +
Sbjct: 16 IALLLAMLLWSSSFIAMKIALTGFDPMVMIFGRMAIASVIFIAV-----WRRNFSGVRYR 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +++ F YAL + P+ LKE +
Sbjct: 71 AGDWKLLGFMTMCEPCLYFVFEAYALEYTSASQAGMIVAMMPLSVAVAARFVLKEHMARS 130
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTIPVGSSEGF 196
L I ++ ++L + + +T + Y + K + F
Sbjct: 131 AWAGFCLAIAGVVWLSLGGQVTENAPNPMLGNALEVCAMLTATGYVISAKRLSSTYPPLF 190
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ LA F V L P L + + +++YG+ R
Sbjct: 191 ITAVQSLAGFVFFLPVLALPGVTLPTSLPLTPTLAVLYLGVCITLGAYGLYNYGVSRLPA 250
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+L ++ +L + + + +V+ +V+
Sbjct: 251 GQAASYINLIPVLTLIMGRVVLGDELSPSQYLASLLVLAGVVL 293
Score = 39.5 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 47/134 (35%), Gaps = 1/134 (0%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+A+ + F I + + + +AI ++ ++ + + L
Sbjct: 20 LAMLLWSSSFIAMKIALTGFDPMVMIFGRMAIASVIFIAVWRRNFSGVRYRAG-DWKLLG 78
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F +Y ++ S G++ PL + V++ F+LK+ + F +
Sbjct: 79 FMTMCEPCLYFVFEAYALEYTSASQAGMIVAMMPLSVAVAARFVLKEHMARSAWAGFCLA 138
Query: 294 VIAMVVYLLPTVIN 307
+ +V L +
Sbjct: 139 IAGVVWLSLGGQVT 152
>gi|255994286|ref|ZP_05427421.1| putative membrane protein [Eubacterium saphenum ATCC 49989]
gi|255992999|gb|EEU03088.1| putative membrane protein [Eubacterium saphenum ATCC 49989]
Length = 326
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/324 (10%), Positives = 101/324 (31%), Gaps = 35/324 (10%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G L +F ++WG + + ++ + R S+ + ++
Sbjct: 1 MKHLKGNLLLFVTSLIWGTAFVAQSASMKHIGPFTFNFIRCSISILCITPVMLMSFKKYK 60
Query: 80 LL-------------------------KDTLKNPKAVGMLVFSATILAVHWGFFIYALLT 114
L K+ K V + + T L + ++
Sbjct: 61 LTNSNAAPSDHTGLYKRISDRCDNLYDKEKSIKFKHVIVGIICGTALFIAMSLQQKGMVY 120
Query: 115 RQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI 174
F + V+ L ++ K + ++ + + L ++T+ ++
Sbjct: 121 TSVTNAGFITAMYIVMVPIL-NIIFKRYPRPITVLCVIAAVFGLYLLTVPENGGFSAVNK 179
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--- 231
+ ++ + + E ++ + I + +++ + F +
Sbjct: 180 GDVYMIISALGFSVQIIAVEHLAKKLDGVTISWVQFIMCALLALPSIFIFNENVNLDSIL 239
Query: 232 -----FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
L L + + G K + + ++ + +++ + IL + T
Sbjct: 240 AAKVSILYAGALSGGLAYTLQIVGQKDTEPTIASLIMSLESVFAVIAGIIILHESPTTRT 299
Query: 287 TIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ A+V+ +P+ + K
Sbjct: 300 LLGCAIMFAAIVISQIPSKKKNDK 323
>gi|225569374|ref|ZP_03778399.1| hypothetical protein CLOHYLEM_05458 [Clostridium hylemonae DSM
15053]
gi|225162173|gb|EEG74792.1| hypothetical protein CLOHYLEM_05458 [Clostridium hylemonae DSM
15053]
Length = 309
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 94/299 (31%), Gaps = 12/299 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
K+ + G F A +LWG + QFL + V+ ++ +R++ + +F V
Sbjct: 12 KKEQDVQRKKGFFAAFMAGLLWGASSPIAQFLFEDKGVTSEWLVPYRLVMAGVLLFLYAV 71
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F ++ + + + F A+ + ++ P + +
Sbjct: 72 LFKKQSPVVWKERSDGVRQIVFSILG--MMGMQYTFFAAVQETNAGTATIFQYLNPAMLI 129
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFAR 185
+V K +I A L + + ++ H I + L + V + +
Sbjct: 130 IYFAVIYKVMPKAKEITAVLCSLAGIFLVVTHGNIHALSVSPKGILLGLLVALTTCFYGV 189
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
P+ + I + + + FL L F FC
Sbjct: 190 LPGPLLKKYPAEMVCAWAMIIGGLVLTAVTRPWRLYVHIDGAVVAAFLSIVILGTIFPFC 249
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K G++ P+ V + L + F +V+ + + + +
Sbjct: 250 FYLSSLKSVGSVYAGLLSSVEPVAATVLAAVFLGTTFRMIDVAGFVLVLSTLFILNINS 308
>gi|163793534|ref|ZP_02187509.1| hypothetical protein BAL199_03464 [alpha proteobacterium BAL199]
gi|159181336|gb|EDP65851.1| hypothetical protein BAL199_03464 [alpha proteobacterium BAL199]
Length = 326
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/288 (15%), Positives = 96/288 (33%), Gaps = 8/288 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G++++ I + + + L + V+E++ R ++ + V AI
Sbjct: 38 NVRGSVWMVLCSIAFAVMATCIKLLGRDLPVIEILFFRQMFVIVVVSPAIC-------RG 90
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ + + V A + V AL+ + F + + L V LKE
Sbjct: 91 FPSIFRTTRLPLHVLRALLAVVAMVTGFTALVHLPLAEATAISFARTLFTTMLAVVILKE 150
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + A L+ + +LI+ S A+ SA A I + +
Sbjct: 151 IVGWRRWSATLVGFVGILIIVRPSPEHFNEYALLSLISACFVAGVQIVLRTVSRLDRPAT 210
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++A ++F + + F+ G + S V + S +
Sbjct: 211 IIAYQSVFLSILLAGPTVYLWVTPTWEQLAFMAAIGCVMSVVQWTMIKAYAAGEASAIAP 270
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
MEY L + + I + I +V+ + + + I
Sbjct: 271 MEYGRLLFATAAGILIFAEIPTVYTLIGSALVIASTLYTVHRNSIRLK 318
>gi|157963069|ref|YP_001503103.1| hypothetical protein Spea_3252 [Shewanella pealeana ATCC 700345]
gi|157848069|gb|ABV88568.1| protein of unknown function DUF6 transmembrane [Shewanella pealeana
ATCC 700345]
Length = 303
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 103/296 (34%), Gaps = 12/296 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G L++F A +L + + ++ + + V I R L + +
Sbjct: 1 MRGVLYLFIATLLAAVGWVASKIVVQSVPGELFIGSRFLLASLVLLPFCY-------KSL 53
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L + + + + ++ +F + +I+ + + +
Sbjct: 54 LKLSMKQLLSACGVGVFLGLALQVWIYAVSISDSLSEGAFIMSLAMIIAPLTAWILFQAK 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG----FFI 198
N IA + +++++L +G + S + ++ + + G
Sbjct: 114 PNRAFWIALPVSTTGMMLLSLTNGWKMESSQLLFLLASALLSVHFVMNKRISGNLKPLVS 173
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L + L + + + + F I + S + + + G + + T
Sbjct: 174 ICLQLFVVGLVGLGYASITQPHSIAFSGELISWFAISTLIATSVRYLLQTMGQYKVSMET 233
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ P+ ++ S+ +L + ++ + I G++ +++ +Y+ + + + K
Sbjct: 234 AALLMILEPIWTLLLSMTLLGETLEPQKLIGGGVIFLSLFLYIKLSRRFAKAEQAK 289
>gi|315650757|ref|ZP_07903809.1| integral membrane domain protein [Eubacterium saburreum DSM 3986]
gi|315486964|gb|EFU77294.1| integral membrane domain protein [Eubacterium saburreum DSM 3986]
Length = 287
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 93/279 (33%), Gaps = 6/279 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L++ A + + L+ + ++ E + R + F ++ +
Sbjct: 5 NKRIGILYILGAAFGFALMGLFVRLAGELPTFEKVFSRNSVATVVAFIMLIRSGYNWENI 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K +L+ ++ + YA+ S ++P ++ L + L+E
Sbjct: 65 -----GRKNWVLLLLRSSCGFIGVICNFYAIDHMNIADASILNKLSPFFAILLSFIILQE 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + I+ ++ + + + S + I V + + G M
Sbjct: 120 KPVIMDILTTVVAFIGAIFVVKPSANFAFVVAMIGVMGGLMAGIAYALVRKMTGGGVKGM 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + F + +F + + + L+G G + A +
Sbjct: 180 FIVFFFSAFSSICCIPLMAMNFIMPSPVQFIMLLGSGFSAMVGQICITKAYTYAPAKEIS 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +YT + + + Q D + I + I++ V+
Sbjct: 240 VYDYTQVIYSALLGFIFVGQMPDVLSFIGYIIIISMAVL 278
>gi|310659227|ref|YP_003936948.1| permease [Clostridium sticklandii DSM 519]
gi|308826005|emb|CBH22043.1| Predicted permease, YCXC B.subtilis ortholog [Clostridium
sticklandii]
Length = 306
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 101/295 (34%), Gaps = 11/295 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ ++G++ ++++ L + +E+I+HR L + + +++ + L +K
Sbjct: 10 IAATLMATIFGMSFMFSKLALANHTPIELIAHRFLLAFVIMSILVLFKVIKIDLKGKNMK 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + +G A + V + ++FLG K+ + +
Sbjct: 70 NLFLLSFAQPILYFIFESYGIKYSASSQAGIMIALIPVCVAILGTIFLGEKNTKQEIFFI 129
Query: 147 QIIAALLIILS----------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ A ++ ++ + + L G + S ++ + S
Sbjct: 130 LLSVAGVVYIAYGKQVDESSSPIGIILLLGAVISSSVYSIISRKISGEFTSSERTYSMML 189
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + AI ++ + + T L + + F + +Y + +
Sbjct: 190 YGALVFNAINLATHINNGNLNQYFTPWSDPAFVTALLYLGIVSSIIAFFLSNYSLTYLEA 249
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
S + A ++ I+ LK+ + I ++++ + ++ +
Sbjct: 250 SKASVFANLATVVSIIMGTVFLKESFSINQIIGSLMILVGVFGTQYTNIMQTKNR 304
>gi|228934653|ref|ZP_04097487.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228825046|gb|EEM70844.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 294
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 95/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKQDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVFITTFEK 293
>gi|47094721|ref|ZP_00232336.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|47016861|gb|EAL07779.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
Length = 322
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 100/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 5 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 64
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 65 LRLPTKQEFGLILLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
+FL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 120 IFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 179
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 180 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVTVHSWKLWLLFVVSAVVATAFGN 239
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + FG ++I +++
Sbjct: 240 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGAL 299
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 300 MDLIYERKKTK 310
>gi|116051212|ref|YP_789957.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
gi|115586433|gb|ABJ12448.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
Length = 297
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 82/288 (28%), Gaps = 3/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +L+G+T ++ + L S ++ R L+++ +
Sbjct: 1 MNRRSALAALHGGALLFGLTGVFGK-LASASPGVIVFGRALFAVLALGLFARLAGQAWRA 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L A+ L+ + ++ + SF F + +
Sbjct: 60 LGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFRERIHL 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ +++ L++++ L AI + G
Sbjct: 120 AEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLANRSNSGQVG--PVQ 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + F+ GE L + + +F + K T
Sbjct: 178 AALWQNLVVALCLLPFAVGELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKARTAA 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ P+ I + + + + ++V+A+V+ N
Sbjct: 238 LVFSLEPVYGIAFAWLLFHETPGPRMFLGGALIVLAIVLSARLGARNR 285
>gi|51473267|ref|YP_067024.1| hypothetical protein RT0056 [Rickettsia typhi str. Wilmington]
gi|81390288|sp|Q68XV0|SAM_RICTY RecName: Full=S-adenosylmethionine uptake transporter
gi|51459579|gb|AAU03542.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 294
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 95/294 (32%), Gaps = 8/294 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + + + +++L + EV R L+S + +VY+
Sbjct: 1 MNDALKTYLKGICWFLLSLVTSSVNDVISKYLGTRLHSFEVAFFRFLFSSIVLLPFVVYY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + V +L + Y L + F P+ ++ L
Sbjct: 61 GKSTLKTRHPV-------IHVLRGLLLFFGMTSWTYGLTIAPVTTATVISFSIPLFTLIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L E + + + ++ + L++M + + +A FA I
Sbjct: 114 AVFILNENIIWQRWVVTVVGFIGLVVMLKPHTKDFNPEILYLILAAISFAMLDIINKKFV 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ + + E++ + + L G SF+
Sbjct: 174 VKESMLSMLFYSAIVTAIVSLPVSMEYWITPSSFELTLLFVLGSSGSFILFFLLKAFTMV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ Y ++ +++ FI + D I++ A + + +
Sbjct: 234 DATATAPYRYLELVISAIAAYFIFNEFPDKSTAHGAVIIIPATLFIMYSEKKSM 287
>gi|148544148|ref|YP_001271518.1| hypothetical protein Lreu_0919 [Lactobacillus reuteri DSM 20016]
gi|184153521|ref|YP_001841862.1| transport protein [Lactobacillus reuteri JCM 1112]
gi|227364577|ref|ZP_03848638.1| DMT family permease [Lactobacillus reuteri MM2-3]
gi|325682308|ref|ZP_08161825.1| DMT family permease [Lactobacillus reuteri MM4-1A]
gi|148531182|gb|ABQ83181.1| protein of unknown function DUF6, transmembrane [Lactobacillus
reuteri DSM 20016]
gi|183224865|dbj|BAG25382.1| transport protein [Lactobacillus reuteri JCM 1112]
gi|227070414|gb|EEI08776.1| DMT family permease [Lactobacillus reuteri MM2-3]
gi|324978147|gb|EGC15097.1| DMT family permease [Lactobacillus reuteri MM4-1A]
Length = 305
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 11/295 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIV 72
E +S M G ++ A +WGI+ Q + Q + ++S R + + V
Sbjct: 1 MEKSSSQVMKGIIWAAVASAMWGISGTVLQLISQNLAIPATWMLSMRTFSAGVILLVISV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + A+ ++ ++ L + F YA+ T + +++P+ V
Sbjct: 61 FLYG-KKIFNVFKTRATAISVISYAILGLMANLLTFYYAIQTGNASAATILQYLSPLFIV 119
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFAR 185
G VF+ R IIA ++ ++ + + L+ + +A +
Sbjct: 120 LGGIVFMHRRPFRSDIIAFVVALIGVALCITRGNFTQLALPFVSLLWGLGSGITAAFYVV 179
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + A + F
Sbjct: 180 LPQRAADENPPIVVLGWGTMIAGVLFNLYRPFWVNPPHITTTLVASVATVVLFGTILPFG 239
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
I + + A V IM+ P+ + SV K ++ + +V+IA+ +
Sbjct: 240 ILLHATRYAPSDVVSIMDAVQPITTSILSVIFFKLNLNWAEILGIILVIIAVYIL 294
>gi|46202129|ref|ZP_00053718.2| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Magnetospirillum magnetotacticum MS-1]
Length = 340
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 82/283 (28%), Gaps = 7/283 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L A IL+G + + + L + + L S G+ G S L
Sbjct: 3 KGILAALVAAILFGGSTPFAKLLLGGIDPWLLAGILYLGSGIGLTAVHFVTKGEQSRLGI 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ ++ + +Y L +S V++ L V KE
Sbjct: 63 ----GEWPWLVGAILSGGVAGPVLLMYGLSGASAATSSLLLNAEGVLTAVLAWVVFKENA 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF--IEMC 201
+ ++ L I++ +++ +G S +A + +++
Sbjct: 119 DRRIVLGMLAIMVGAAVLSWPTGSVEPSWPSLAVLAACLCWAIDNNLTRKVSLSDPVQIA 178
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + L F G++ + G
Sbjct: 179 AIKGLSAGVTNVVLAVAMGAHSPPVATVAAAGAIGFLGYGISLVAFVVGLRELGTARTGA 238
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
TAP + + SV +L + I ++ + + ++L
Sbjct: 239 YFSTAPFVGAIVSVLLLGETISLRLVAAAALMGVGVWLHLTER 281
>gi|332977478|gb|EGK14252.1| DMT superfamily drug/metabolite transporter [Desmospora sp. 8437]
Length = 317
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 86/300 (28%), Gaps = 11/300 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G V A +LWG T Q L V +++ R+L S + I
Sbjct: 5 KNNRIKGFAMVLGAAMLWGFTGTVAQHLLHDRQVDPGWLVTVRLLVSGILLLLFISLRGE 64
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G + +L+ + F A+ T + ++ PV+ +
Sbjct: 65 GAQVRAVWKTPRDRRELLLLGVVGMMGVQYTFFAAIDTGNAATATLLQYLGPVLLTGWVA 124
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKTI 188
+ ++ + A + + LS++ A A+
Sbjct: 125 LSMRRMPESREWAAVGFALTGTFFLVTGGSGSSLSISPAALIWGLLSAVTLAFYTVYPAR 184
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + I + + L L+ F ++
Sbjct: 185 LLKRWGSAPVVGWAMLIGGVALAFFCPPWAAPWSVWSVETILLILLVVVFGTLVPFFLYL 244
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ S G++ PL V +V+ L P + +++ +++ +
Sbjct: 245 DSLRFLLPSETGLLSCAEPLTAAVLAVWWLGVPFGPGEWLGALLIMGTVILLSIGGQRER 304
>gi|300854970|ref|YP_003779954.1| hypothetical protein CLJU_c17890 [Clostridium ljungdahlii DSM
13528]
gi|300435085|gb|ADK14852.1| predicted membrane protein [Clostridium ljungdahlii DSM 13528]
Length = 292
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 97/292 (33%), Gaps = 13/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + +GI P+ + + + V+ R L S +F +
Sbjct: 1 MNNYKGIAYALLSSTAFGIMPILARIAYFNGSNPTTVLLFRFLISTLILFLYL-----NF 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + LK + + ++ T + + G L + +F+ PV+ G +F
Sbjct: 56 SHININLKKEQVLLLISIGITGYTITTQALFISYNYLGGGLATTLHFIYPVVVCIAGFIF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
K++++ +II+ LL + + + L I ++ A + S
Sbjct: 116 YKDKMSTKKIISLLLAAAGIYTLVGFKNNTIDILGISLALFSGFSYGLTLIALNLKSIRS 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ M + + + F+ +L + + I+
Sbjct: 176 LDNRVTTMYLCLGSTIGTALCGLFNKTVALNFNFKIVVCYLGISVVSTILSIILLLKAIE 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+S+ I+ P++ + V L + + + +++I +V
Sbjct: 236 LIGVSSSSILGTFEPIVSVFLGVLFLNEQMSLAILVGSALILICTIVLAKDK 287
>gi|298529736|ref|ZP_07017139.1| protein of unknown function DUF6 transmembrane [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511172|gb|EFI35075.1| protein of unknown function DUF6 transmembrane [Desulfonatronospira
thiodismutans ASO3-1]
Length = 311
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 94/297 (31%), Gaps = 6/297 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G L + ++WG + + ++ + R + I+YF
Sbjct: 2 SWKNHLRGDLLLLLTALIWGSAFVAQKVGMDHMGPFMYTGIRFALGALVLTPLILYFGSL 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K+P + + S TIL V ++ F + VI +G +
Sbjct: 62 RPPSAAGQKSPSILLAGLLSGTILFVASILQQVGIIYTTAGKAGFITGLYVVIVPLIGCL 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----IPVGSS 193
+ + A+L + L ++T+ G+ + V A+ +A
Sbjct: 122 WGFR-PGAGAGVGAVLAVTGLYLLTITDGLTISLGDSLVLACAFMYALHVLAIGWMAPRM 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + A ++ + + L G L F + KR
Sbjct: 181 DVLRLAALQFWVCAGLSLLVGLALEELTWNMVRSAAVPILYGGVLSVGVAFTLQVVAQKR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + ++ + + + + IL + + +++ M+ L +V K
Sbjct: 241 SPPTHAAVILSLETVFAVFAGMIILGEALSPRGWAGCALMLAGMLAAQLDSVYPVKK 297
>gi|212696924|ref|ZP_03305052.1| hypothetical protein ANHYDRO_01487 [Anaerococcus hydrogenalis DSM
7454]
gi|212676214|gb|EEB35821.1| hypothetical protein ANHYDRO_01487 [Anaerococcus hydrogenalis DSM
7454]
Length = 301
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 84/290 (28%), Gaps = 8/290 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L +F +WG + + + R L + +FF +++ +
Sbjct: 2 KNKHRGELLLFLTSFIWGFAFIAQKLGSDYIPPFTFNFLRNLVAGIFLFFYLIFRRKKSN 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
D + + + + ++A+ F + F + VI +
Sbjct: 62 KKIDAYTKTETIRGAIATGIVMAIAVSFQQIGVYYTTSGKAGFITSLYVVIVPIFAIF-M 120
Query: 140 KERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++++ I+ +L ++ L ++T + + + + A+ S
Sbjct: 121 GKKVSKKTGISIILALIGLYLLTVKVEDGFSVNKGDILIFVGSLFFAFHILFIDYYSPKS 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + M I + L L + + + K
Sbjct: 181 DSVKMSMLQFFIASFISFCLMILFEKPDINLILKGILAILYLGIFSSGLGYTLQIIAQKD 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ ++ + LK+ ++ IA+++ +P
Sbjct: 241 TDPTISSLILSLEAVFAAFFGFLFLKEVPVDREIFGGILMFIAIILSQVP 290
>gi|169630841|ref|YP_001704490.1| hypothetical protein MAB_3762 [Mycobacterium abscessus ATCC 19977]
gi|169242808|emb|CAM63836.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 350
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 92/302 (30%), Gaps = 24/302 (7%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
N G + + +G + + + L S+ V++ R+ + A +
Sbjct: 2 NDKANFRAGVILALVSAATFGFSGPFAKSLMAAGWSLTAVVTARLATGAAVMVVAACIAA 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + A ++++ +A + A+ + F++P++ +
Sbjct: 62 PGW----FSEARRHAKVVVLYGIIPVAGAQFCYFGAVRHMSVGVAMLLEFLSPILVIAWT 117
Query: 136 SVFLKERLNHLQIIAALLIILSLLIM--TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + R + + A L + +L++ G +A C A I +
Sbjct: 118 WMITRHRPHTRVLAGATLALSGMLLVLNIFSGGRVEPVGIAWGLGAAVCAAYYFISSHRA 177
Query: 194 EGFFIEMCVL----------------AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
G E+ + + L+
Sbjct: 178 GGKAEELQPITLATSGLLVGAVAVGGFGLTGIMPLTFSTQDVHVAGWNTPVYVPILVLGV 237
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + + I R + S ++ T L +++ +L + I ++ +++ +
Sbjct: 238 VTTAIAYITGIAAITRLRPSYASLIALTEVLCAVIAGWVLLGETIAPIQYAGAAVILAGL 297
Query: 298 VV 299
++
Sbjct: 298 ML 299
>gi|17548906|ref|NP_522246.1| hypothetical protein RS01764 [Ralstonia solanacearum GMI1000]
gi|17431156|emb|CAD17836.1| putative tonb box harboring transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 300
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 78/288 (27%), Gaps = 9/288 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L + A + G T + ++ + + + R +LP +F ++
Sbjct: 2 SNRTIGYLLLSLAMMTVGSTVIASKLIAGNLPPFPATALRFAVALPFLFALVLLRGQRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +++ + + I L P +S + L
Sbjct: 62 RLSG----RAWGLLVLQAGAGSVGYTTLLISGLAHLPAADAGVVIGTLPAVSALFSVIVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEG 195
ER +++ LL + ++ + + F +
Sbjct: 118 GERPKLRLMVSVLLATIGVMAVAWTGSGSAPLTGVLFILGAVVCESAFILLNKRMPVPLP 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + L + + + F ++ G R
Sbjct: 178 PLLQATAMTALGLLVSLPFAVLEFPATVPSTAAIAAVVWYALVPTVGGFLLWYAGAARVS 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S APL + + L + I + V++A++ L
Sbjct: 238 GSEAATFTAVAPLTAVALAALFLNERIGATQAFGVVAVILAILTLTLS 285
>gi|85706006|ref|ZP_01037102.1| Putative transporter, RarD family, DMT superfamily protein
[Roseovarius sp. 217]
gi|85669594|gb|EAQ24459.1| Putative transporter, RarD family, DMT superfamily protein
[Roseovarius sp. 217]
Length = 306
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 94/301 (31%), Gaps = 5/301 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + +L+ + V E + R +++P + + +
Sbjct: 1 MRPLTGISLKLISVMLFITMSSLIKATAAHVPPGEAVFFRSFFAIPVILIWLTLRGDLRT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ T V +A + + L + V ++FL
Sbjct: 61 GLRATSPMSHFWRGFVGTAAMGLGFAALGMLPLPEVTALSYAAPLLVVIFAAMFLNEQVG 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK----TIPVGSSEG 195
R+ + + ++I+ +T SG + ++ A A I V
Sbjct: 121 VFRIGAVALGLGGVLIVLAPRLTALSGPTVETMQAVGAMLAVTGAICAALAQIYVRKLVQ 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ ++ V + + + + P+ L+ GLL + + A
Sbjct: 181 TEETSAIVFYFSVTSTVLSFLTIPFGWVMPTGPELGLLVLAGLLGGLGQIFLTSSYRFAD 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S V +Y + L + FI + +V++A ++ +L + +
Sbjct: 241 ASVVAPFDYASILFALGIGYFIFDEVPTRAMLTGASLVILAGIIIILRERQLGIQRNRAR 300
Query: 316 S 316
S
Sbjct: 301 S 301
>gi|256157648|ref|ZP_05455566.1| hypothetical protein BcetM4_02175 [Brucella ceti M490/95/1]
gi|256253377|ref|ZP_05458913.1| hypothetical protein BcetB_03582 [Brucella ceti B1/94]
gi|261220498|ref|ZP_05934779.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265996153|ref|ZP_06108710.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260919082|gb|EEX85735.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262550450|gb|EEZ06611.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 305
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 92/285 (32%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F +Y + ++ +FL+ +S E+ + + + F+
Sbjct: 2 LYGILLAFASYAAFAVSDACVKFLDGTLSPYEIAFY-----GAVLGLLAIPFTKKADDAW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L +FLKE+
Sbjct: 57 LDMFRTGNIKMWLLRTVTAAMGVIGSVAAFTYLSMAEAFALIFLLPAYVTILSVIFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L++ L + + A I + +
Sbjct: 117 VGWRRWSAVAIGFAGVLVVLRPGFRELSIGHLGALAAGMGGATSIIIFRVMGKNEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G + ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLVGPILICGALIAPSYQAPGTMQWVYLAGYGLLAALANILLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ ID I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDMPMLIGIVLITISGLFTFIRERQR 281
>gi|148558831|ref|YP_001258611.1| hypothetical protein BOV_0617 [Brucella ovis ATCC 25840]
gi|148370088|gb|ABQ60067.1| putative membrane protein [Brucella ovis ATCC 25840]
Length = 338
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 97/294 (32%), Gaps = 14/294 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 34 EMNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWR 88
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 89 GQLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAIL 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 149 HEVVRFYRWSAVLIGLFGVMIIIWPRLTPFSAGSVGRDEAVGALAALGAAVMSAVAMMLV 208
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ ++ V S + + N L+G G + +
Sbjct: 209 RRLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTEC 268
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 269 YRHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 322
>gi|332663146|ref|YP_004445934.1| hypothetical protein Halhy_1163 [Haliscomenobacter hydrossis DSM
1100]
gi|332331960|gb|AEE49061.1| protein of unknown function DUF6 transmembrane [Haliscomenobacter
hydrossis DSM 1100]
Length = 281
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 80/294 (27%), Gaps = 13/294 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G L V +W L + L ++ +R +++
Sbjct: 1 MKNQHSLGVLAVLLGATIWSTGGLCIKLL-PYDPFTILFYRSVFAALTFLAVF------- 52
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ M+V F+ A + P+ L +
Sbjct: 53 -----RRRALTLTPMVVAVGLQYTALATCFVVATKITTAANAVLLQYTAPIYVFLLEPIL 107
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K +L L II ++ L +L+ + + +
Sbjct: 108 FKFKLTRLNIITVVVCTLGMLLFFAEDLGGGSLKGNLIALLSGVMLAAMMLTQRYNKPEN 167
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L +F + + TLF I + + +F+YG+KR
Sbjct: 168 YDAGLFWGNIFIALICLPWYLQSATPTLEHWTLFFILGVIQIGVGYMLFNYGLKRTLAIE 227
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ P+L + + + +++ + V ++ + G +
Sbjct: 228 SVLLAMMEPILNPLWVFIGYGEKPGVWTIVGGVVILGMLAVQVVMKERHLGPAR 281
>gi|304394077|ref|ZP_07376000.1| integral membrane protein [Ahrensia sp. R2A130]
gi|303293517|gb|EFL87894.1| integral membrane protein [Ahrensia sp. R2A130]
Length = 319
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 94/292 (32%), Gaps = 8/292 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S ++G F+ AY + + ++L +++ R +
Sbjct: 27 SDRPLLGISFMLVAYFCFSLIDTSVKWLAIAGFPAMQLAFMRYFAHFVIATGLLA----- 81
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L +G +VF +++ +A+ LTS F P+I L
Sbjct: 82 RDGLDRDTFRAPQIGWVVFRGSLIMASTVCNFFAVKYLSLTLTSTILFAAPLIVCALSWP 141
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-F 196
L ER+ ++ A +L + ++I +A CFA +I G
Sbjct: 142 LLGERVGPVRWAAIMLGFVGIVIAIRPFDDSFHWAVFLSLAAASCFALYSILTRKLAGKV 201
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
A+ + F+ + + + + L+ G+ + + + A
Sbjct: 202 STNTMQFYSGAVGFTTLLPFAVAQWVWPESWLHWVLLVALGVWAWAGHQLLTAAHRFAPA 261
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
ST+ Y + + V S + D + I+V A ++ +
Sbjct: 262 STLTPYAYCFIVYLAVWSWLLFDDLPDQWTILGAAIIVTAGIIIWFRERQKA 313
>gi|260584128|ref|ZP_05851876.1| integral membrane protein [Granulicatella elegans ATCC 700633]
gi|260158754|gb|EEW93822.1| integral membrane protein [Granulicatella elegans ATCC 700633]
Length = 305
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 99/305 (32%), Gaps = 11/305 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G ++ I WG++ Q+L VS + + + R++ + + Y+
Sbjct: 2 NQLVKGRIYTLIGAISWGLSGACGQYLMNDSAVSPIYLTALRMMIAGLVLTLFA-YWKQP 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ ML F L + ++ A+ + + + P++ V S+
Sbjct: 61 KQFREVVKSPKIMGRMLFFGIFGLMLCQLTYLIAIHSSNAGTATVLQYTCPILIVIYVSI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K ++ IA ++ ++ H LSL+ A + A G
Sbjct: 121 KEKTVPTVMEFIAIFCALVGTFVIATHGNPFNLSLSAAGLFWGIISAFTYALYTLLPGKL 180
Query: 198 IEMC-------VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I+ + + S F+ G+ F + ++ G
Sbjct: 181 IQQWGSLIVTGLGLLSGGILFYIGSASWQYTIQWEPYTLFAFIGIIGIGTIFAYTLYLEG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ P+ + S+ +L + + +++IA+ + + +
Sbjct: 241 VSLIGPVQGSLLASAEPISSVFFSIILLGAVFQGIDIVGIVLILIAVYLITMKEQLQEKH 300
Query: 311 NKTKK 315
+ +K
Sbjct: 301 MRIEK 305
>gi|260462754|ref|ZP_05810959.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259031398|gb|EEW32669.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 296
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 94/281 (33%), Gaps = 7/281 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY + + + L +V E+ L++ +FF
Sbjct: 4 GILLALIAYASYSGSDAVIKSLGGQFTVFEIGFFATLFAGCFLFFT-----RPAGERWRD 58
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K + A +YA F+ P++ L +V LKE++
Sbjct: 59 FWRMKRPWAVQARAWAGIPSGVLSVYAFTHIPLAEVYALIFLAPLLVTILSTVILKEKVG 118
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +A + ++++ L +A A+ A I + S +L
Sbjct: 119 PWRWLAVVAGFAGVMLVVRPGFRELNLGHLAAFVVAFLAATSVILMRSLAQQEKRTSMLG 178
Query: 205 IPALFYVVWNGF-SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + +V+NG + F L N ++L G + + K A + +
Sbjct: 179 VLVGYGLVFNGLGAATTSFTLPNAMQLVWLALAGAFTAGGQLLQLLAAKYAPANRIAPTH 238
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
Y+ + ++ ++ D + + +V + ++ ++
Sbjct: 239 YSQIVWAVILGALFFQEYPDWLSLVGLAVVGGSGLLTMVRE 279
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 36/112 (32%)
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F + A ++ + +G + + + Y
Sbjct: 30 TVFEIGFFATLFAGCFLFFTRPAGERWRDFWRMKRPWAVQARAWAGIPSGVLSVYAFTHI 89
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
L+ V + + APLL+ + S ILK+ + R + +++ + P
Sbjct: 90 PLAEVYALIFLAPLLVTILSTVILKEKVGPWRWLAVVAGFAGVMLVVRPGFR 141
>gi|167581828|ref|ZP_02374702.1| hypothetical protein BthaT_27034 [Burkholderia thailandensis TXDOH]
Length = 311
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 85/302 (28%), Gaps = 15/302 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A + G T + ++ + + + R L + ++ +
Sbjct: 2 KTKLVGYLYLAAAMMGVGSTVVASRIAGDGLPPFTAAALRFLIASVPLYALMRAQRHRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L ++V +A + + P +S L +V L
Sbjct: 62 RLAP----RDVGLLVVQAACGGVGYTVLLLAGTHLSSPVDAGVMLGTLPAMSTLLAAVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPV 190
+ER AA L +L++T G S+ AV A
Sbjct: 118 RERQTPRDWSAAALATAGVLLVTFTPGRATPSMRALVGDALVLAAVACEAVFILLNRRLA 177
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + AL V + + +
Sbjct: 178 VPLAPLVQSTAMSVLGLALALVPAAFEWRTATAAWQPAALAATAYYALVPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G R + + AP ++ + + + +R +VV ++V L +
Sbjct: 238 GSARTSGTEAALFTAVAPASAVLFAAAVFGESPGGMRFAGIAMVVAGVLVGALRPRRGAK 297
Query: 310 KN 311
++
Sbjct: 298 RS 299
>gi|149377838|ref|ZP_01895569.1| hypothetical protein MDG893_18759 [Marinobacter algicola DG893]
gi|149357896|gb|EDM46387.1| hypothetical protein MDG893_18759 [Marinobacter algicola DG893]
Length = 307
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/305 (10%), Positives = 91/305 (29%), Gaps = 18/305 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S P + + + W + + + ++ L + R + +L + +
Sbjct: 5 TSKPLWLAYTGLVLTPLFWAGNAVMAKSVVGEIPPLSMSFWRWVIALTILLPFGLPGVWR 64
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + +A +A +T + P++ L +
Sbjct: 65 QRRVIREHSLSILAL----ATFSVAAFNSLLYFAAVTTTATNIALINATIPIMVALLAWL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTL-------------HSGIPLLSLAIAVTWSAYCFA 184
L +R +Q + L +L +L + + ++ + +
Sbjct: 121 LLGDRTRPIQALGIGLAVLGILAVVARGDLSVLTGLRAQPGDLIMVLAVSSWGLFSVLLR 180
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
R+ +P+ +++ + L + + + F L + +
Sbjct: 181 RQAVPLPPLTFLTVQIACGTMVILPFFLVDLLFFSGGFELNTSTALPMMYFAIFPGILAY 240
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++G+ R + I Y P+ V + L + + I +++ + + T
Sbjct: 241 AFWNHGVHRIGPAKAAIFMYLTPVFASVMAGIFLGERLGLFHVIGGLLILAGLFLATRTT 300
Query: 305 VINSG 309
+
Sbjct: 301 ELRRK 305
>gi|332559114|ref|ZP_08413436.1| DMT family permease [Rhodobacter sphaeroides WS8N]
gi|332276826|gb|EGJ22141.1| DMT family permease [Rhodobacter sphaeroides WS8N]
Length = 284
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/282 (10%), Positives = 86/282 (30%), Gaps = 8/282 (2%)
Query: 30 VFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + + + G+T + + + R + + +V +
Sbjct: 1 MLASGVSFVGVTGIVRYLGTDIPAAQGAFLRFAFGALFLLPTLV-------PVLRQGVPM 53
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + YA+ + ++ PV+ ++F ERL +I
Sbjct: 54 STLKLYGLRGAFHTAAVICWFYAMARIPVAEVTAIGYLNPVLVTVGAALFFSERLALRRI 113
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A + ++ LI+ L + ++ +A FA + ++A+ +
Sbjct: 114 LAVAVALVGALIVLRPGLRELSAGHLSQLCAATLFAGSYLLARRLSDVAGAGAIVAMMSA 173
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + + L+L + + + A L+ + + L
Sbjct: 174 TVTLGLLPFALLVWVPVGVDQLLWLALVAVFATAGHYCMTRAFGAAPLTVTQPVTFLQLL 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + +D + GI++ A+ + +
Sbjct: 234 WATLLGALAFGERVDPFVLLGGGIIISAISYITWRESVLKRR 275
>gi|329767680|ref|ZP_08259199.1| hypothetical protein HMPREF0428_00896 [Gemella haemolysans M341]
gi|328839030|gb|EGF88618.1| hypothetical protein HMPREF0428_00896 [Gemella haemolysans M341]
Length = 295
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 96/292 (32%), Gaps = 11/292 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
G + WG++ + ++L ++ VIS+R+ +S + + +
Sbjct: 3 KSTMKKGAILTLLGATCWGLSGVLGEYLLNISKIDSTWVISNRLFYSGIVLVIIL-FLKD 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
SL+ + +L FS L + G F A+ + + F PV+ +
Sbjct: 62 KKSLMNVFSDKKDILRLLNFSFLGLLICQGTFFLAIKYTNAGMATVIQFTGPVMIMTYYC 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIP 189
+ + +++A + + ++M H L I + + ++
Sbjct: 122 IISRRWPLPREVVAIVSSLFGTVLMATHLDFSKLNISTLGLFWGIFSAFGLASYNISSVN 181
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ G M + A V + S + + F ++
Sbjct: 182 LTKKYGVMPIMTWGLLIAGSVVYFGTGSNYIPSNFTFMDFLCITGVIIVGTIMSFSLYLE 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G++ T I+ P+ IV S +L + I ++ A+VV
Sbjct: 242 GVRMIGAVTGSIIGCFEPIAAIVFSFLLLGTTFGLIDIIGAAFILSAVVVLS 293
>gi|262282071|ref|ZP_06059840.1| membrane protein [Streptococcus sp. 2_1_36FAA]
gi|262262525|gb|EEY81222.1| membrane protein [Streptococcus sp. 2_1_36FAA]
Length = 303
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 105/300 (35%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GT++ A WG++ Q+L S L + + R+L + + YF+
Sbjct: 2 SKTVRGTIYTLVAGTAWGLSGTSGQYLMVHGFSALSLANFRLLVAGLALIGMA-YFADPK 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + V + VF+ L ++ ++ A+ + ++ PV + +
Sbjct: 61 SFGQIWKDKQSLVMIFVFALFGLFLNQYAYLEAIHETNAGTATVLQYLCPVGLLAYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVG 191
K +I + +L I ++ H + LS+ + ++ + I V
Sbjct: 121 DKVSPTVSEIASMILAIGGTFLIATHGQLNQLSMTPKGLLLGLFSAFTYSLYILLPIDVI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + A ++ + + F + +F G
Sbjct: 181 KKWGSMLVIGIGMTVAGLLLLLFSGLSQHQWKFTPDIVMALFGIILVGTIFAYTVFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+++ + + ++++A+++ L ++ K
Sbjct: 241 TLVGPVKSSLLASIEPISAVFFAFLIMQEQFYALDFLGMAMILVAVMLISLKDLLIQRKK 300
>gi|224500410|ref|ZP_03668759.1| hypothetical protein LmonF1_12379 [Listeria monocytogenes Finland
1988]
gi|284800770|ref|YP_003412635.1| hypothetical protein LM5578_0518 [Listeria monocytogenes 08-5578]
gi|284993956|ref|YP_003415724.1| hypothetical protein LM5923_0517 [Listeria monocytogenes 08-5923]
gi|284056332|gb|ADB67273.1| hypothetical protein LM5578_0518 [Listeria monocytogenes 08-5578]
gi|284059423|gb|ADB70362.1| hypothetical protein LM5923_0517 [Listeria monocytogenes 08-5923]
Length = 319
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 100/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKREFGLILLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
+FL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 IFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + L + L + G LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSLMLFGLSRFMEPGGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + F ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFIFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|72382110|ref|YP_291465.1| DMT family permease [Prochlorococcus marinus str. NATL2A]
gi|72001960|gb|AAZ57762.1| permease of the drug/metabolite transporter, DMT superfamily
[Prochlorococcus marinus str. NATL2A]
Length = 302
Score = 74.9 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/306 (11%), Positives = 100/306 (32%), Gaps = 15/306 (4%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFA 70
K L+ + G F+ + + + + + + + + E++ R S+
Sbjct: 4 KLLTNKLNIEKNFKGIRFLIGSGFAFSLMTVCVKAIGGRIPISELVFARATISIII---- 59
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + +L+ + V AL + ++ P
Sbjct: 60 ----TRFYLYKNNINPWGYQKRLLIIRGLLGTVALFCIFKALTILPIATATVIQYIYPTF 115
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFA 184
+V + LKE + + + ++ + +++++ ++ I + A +
Sbjct: 116 TVICAYIILKEFILSRIVYSIIIGWIGIVLVSQPEFTGNSNIQETILAIIIAIFGALMTS 175
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
I V + ++ L + + F L + D ++IG G+
Sbjct: 176 LAYICVRKLSSKEHPLVIIYYFPLVSIPLSIPFIINDFVLPSGTDWFWIIGIGIFTQIGQ 235
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G++ + Y+ + + V I ++ I + + V+I+ ++ + +
Sbjct: 236 LCITEGLRLLPAGQATSLNYSQVIFASIWGVLIFQEKITSSIYLGGFCVLISTIISMSAS 295
Query: 305 VINSGK 310
K
Sbjct: 296 KRTQSK 301
>gi|332652779|ref|ZP_08418524.1| putative membrane protein [Ruminococcaceae bacterium D16]
gi|332517925|gb|EGJ47528.1| putative membrane protein [Ruminococcaceae bacterium D16]
Length = 298
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 84/277 (30%), Gaps = 14/277 (5%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+F A +WG + + L+ V +++ R + T+
Sbjct: 5 MLFLAAFIWGTSFFIMKNTLDATPVFWLLTFRFGTGAILLGLFCW-------KKWGTVFK 57
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ L + + + L+ +F V V+ FL K+R +
Sbjct: 58 KDYIWRGGILGAFLYLAYSAQTFGLVYTTPSKNAFLTSVYCVLVPFLYWWLAKQRPDRYN 117
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIEMC 201
I+AA+L + + +++L+ + + + SA +A + V +
Sbjct: 118 ILAAVLCVAGVGLVSLNGDLTITIGDLLTLVSALFYALHIVAVNKLSPGKDVYLITVFQF 177
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
F L + + + G + S+ +
Sbjct: 178 AGTAILSLISAALFQPFPAAIFSQAQVLLPLLYLCVVCTTVALLFQNVGQVGSDPSSASV 237
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + ++ SV P+ F ++ +A++
Sbjct: 238 ILSLESVFGVLFSVLFYGDPVTPRLLAGFALIFVAVI 274
>gi|288550177|ref|ZP_05969534.2| hypothetical protein ENTCAN_08148 [Enterobacter cancerogenus ATCC
35316]
gi|288316037|gb|EFC54975.1| membrane protein [Enterobacter cancerogenus ATCC 35316]
Length = 314
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 96/296 (32%), Gaps = 12/296 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ +S + R+L++ +
Sbjct: 16 STRKGMLNVLIAAVLWGSSGVCAQYIMEKSHISSPYLTMIRLLFTGVILLTLSFVHGD-- 73
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L FS F+ + + F++P I V ++
Sbjct: 74 KIFSVIKNRKDALSLLFFSLVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 133
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K+R + A + ++ ++ H L IA ++A + +
Sbjct: 134 RKKRPGIFVLSAIMTSLVGTFLLVTHGDPTSLSISPAALFFGIASAFAAAFYTTYPSTLI 193
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + A + G F F + + F ++ G
Sbjct: 194 ARYGTLPIVGWSMLIAGLVLTPFYAGRGTTFAFDGSLLLAFFYLVVIGTALTFSLYLKGA 253
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I+ PL + SV +L + ++V ++V+ + +
Sbjct: 254 QMIGGPKASILSCAEPLSSALLSVILLGVAFTLPDWLGTLLIVSSVVLISMDSRRR 309
>gi|212639249|ref|YP_002315769.1| drug/metabolite transporter (DMT) superfamily permease
[Anoxybacillus flavithermus WK1]
gi|212560729|gb|ACJ33784.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Anoxybacillus flavithermus WK1]
Length = 310
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 85/295 (28%), Gaps = 17/295 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F A +WG + + + + V R + +F + + + T
Sbjct: 9 YILLFLAATIWGGAFVAGKIATTTLHPVSVAFFRFFGASLILFPLLYW----KEPNRPTP 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + T + ++ FF A +S V + L ++FLKE+LN
Sbjct: 65 TRKDWIVLALLGLTGVFLYNIFFFIATKYAPIVKSSLVIAVNAPLITLLSALFLKEKLNG 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIA------------VTWSAYCFARKTIPVGSS 193
I LL + + + + +L + + + S
Sbjct: 125 RSIFGMLLAVFGAVYIITNGHPSVLIEIGVAPIDLVLVGACLSWSTYSVIGKVAMKTYSP 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L S G L ++++ F + GI++
Sbjct: 185 LAATTYATGFGTLFLAPFALYYTSFTSVKMSGWDVWLSVLYVAVVVSAISFVWWYNGIQK 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
ST + P+ V + + + V ++ + +
Sbjct: 245 VGASTASVFINVMPISATVMGTIFFNEHLSMTHIVGAAFVFSGILFNIYSKQEKA 299
>gi|17988959|ref|NP_541592.1| transporter, DME family [Brucella melitensis bv. 1 str. 16M]
gi|225686443|ref|YP_002734415.1| hypothetical protein BMEA_B0639 [Brucella melitensis ATCC 23457]
gi|256043553|ref|ZP_05446480.1| hypothetical protein Bmelb1R_03626 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256111417|ref|ZP_05452437.1| hypothetical protein Bmelb3E_02220 [Brucella melitensis bv. 3 str.
Ether]
gi|256262415|ref|ZP_05464947.1| drug/metabolite transporter superfamily protein [Brucella
melitensis bv. 2 str. 63/9]
gi|260564746|ref|ZP_05835231.1| drug/metabolite transporter superfamily protein [Brucella
melitensis bv. 1 str. 16M]
gi|265989970|ref|ZP_06102527.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992920|ref|ZP_06105477.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17984793|gb|AAL53856.1| transporter, dme family [Brucella melitensis bv. 1 str. 16M]
gi|225642548|gb|ACO02461.1| protein of unknown function DUF6 transmembrane [Brucella melitensis
ATCC 23457]
gi|260152389|gb|EEW87482.1| drug/metabolite transporter superfamily protein [Brucella
melitensis bv. 1 str. 16M]
gi|262763790|gb|EEZ09822.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000639|gb|EEZ13329.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092150|gb|EEZ16447.1| drug/metabolite transporter superfamily protein [Brucella
melitensis bv. 2 str. 63/9]
gi|326410821|gb|ADZ67885.1| transporter, DME family [Brucella melitensis M28]
gi|326554112|gb|ADZ88751.1| transporter, DME family [Brucella melitensis M5-90]
Length = 305
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 91/285 (31%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F +Y + ++ +FL+ +S E+ + + + F+
Sbjct: 2 LYGILLAFASYAAFAVSDACVKFLDGTLSPYEIAFY-----GAVLGLLAIPFTKKADDAW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L +FLKE+
Sbjct: 57 LDMFRTGNIKMWLLRTVTAAMGVIGSVAAFTYLSMAEAFALIFLLPAYVTILSVIFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L+ L + + A I + +
Sbjct: 117 VGWRRWSAVAIGFAGVLVALRPGFRELSIGHLGALAAGMGGATSIIIFRVMGKNEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G + ++L GYGLL + + +RA S +
Sbjct: 177 YTSGLVGPILICGALMAPSYQAPGTMQWVYLAGYGLLAALANIMLMLAAQRAPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ ID I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDMPMLIGIVLITISGLFTFIRERQR 281
>gi|28212015|ref|NP_782959.1| transporter [Clostridium tetani E88]
gi|28204458|gb|AAO36896.1| transporter [Clostridium tetani E88]
Length = 344
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 92/294 (31%), Gaps = 12/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ T+ +++G++ L+T+ L + ++I+ R L + + I ++
Sbjct: 24 NTKVLATITAISYSVIFGLSFLFTKKALIFATPFQLIAFRFLLAFIFMSILIFSKILKIN 83
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K + ++ + +G + + V L +
Sbjct: 84 YENKDIKGLFFLVLMQPIGYFIFETYGLKLSTSSQAGILTALIPIISSIVAVYILKEIPS 143
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K++ + + +I + ++ SG LL + + + S F
Sbjct: 144 KKQWFFIILSVIGVIFIVIMDKNSDSGNSLLGTFLLLGAIICGSFYHVLSRKVSSTFTPI 203
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNI-----------PDTLFLIGYGLLNSFVFCIFS 248
+ + V +N S H + L L + F +
Sbjct: 204 ETTYFMMGVGAVTFNFISIITHIKDNDFSNYFHLLYNKDFLIPLLFLGILSSVIAFLFVN 263
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + S + + ++ I++ V L + I I ++I +
Sbjct: 264 FSLCYLEASKCAVFSNLSTVISILAGVLFLDEKIYWYHIIGSITILIGVYFTNY 317
>gi|212704081|ref|ZP_03312209.1| hypothetical protein DESPIG_02136 [Desulfovibrio piger ATCC 29098]
gi|212672441|gb|EEB32924.1| hypothetical protein DESPIG_02136 [Desulfovibrio piger ATCC 29098]
Length = 324
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 81/278 (29%), Gaps = 1/278 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVS-VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + + + T S L + + R+ ++ + L+
Sbjct: 20 GPLCIILGALCFSTTGTVQALAPDGSHPLGIGALRMQIGALALWAWCACRHSLPAGLRHW 79
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L + WG + FS + +++ +
Sbjct: 80 QLRWLIPATLGLLGFQVFFFWGVQQAGVAVGTVTAIGFSPVMAAILAHIILGERPARIWY 139
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+A ++L L + + L L + + + P+G M +L
Sbjct: 140 PATALALAGLVLLNLGGSQGASTAALILPLLAGACYGAYFVFSKPLGRVHAPEHIMLLLC 199
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ ++ F + L + L + + F + G++R + +
Sbjct: 200 AGSGILLLPVHFCTPPLWLLQPQGLGMALYLGVVTAALAFSLTLAGLRRTPTAMAATLAL 259
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
PL +F+L +P+ G++ + + L
Sbjct: 260 VEPLGAACWGIFLLHEPVGGQELAGMGLLFGGVALLAL 297
>gi|166032345|ref|ZP_02235174.1| hypothetical protein DORFOR_02048 [Dorea formicigenerans ATCC
27755]
gi|166028068|gb|EDR46825.1| hypothetical protein DORFOR_02048 [Dorea formicigenerans ATCC
27755]
Length = 305
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/306 (10%), Positives = 91/306 (29%), Gaps = 16/306 (5%)
Query: 2 GKGATKKEYSKGLSKENASLPTM---MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVIS 57
G K +K + + + + + + WG + L + L + +I+
Sbjct: 1 MSGERKNTITKSATANTTTKKGLSQGQADILIAIVAMTWGSSYLMMKIGLTGMPPFSIIA 60
Query: 58 HRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
R + V + ++L + +L + F + +
Sbjct: 61 LRFCIAFITVALVFLPKMKLMNLRTLGYGSI--------LGLLLFGVFAFLVPGMKYTTA 112
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LA 173
F + V + S + + + LL +L + ++T S +
Sbjct: 113 SNAGFLVGIVSVFVPVVHSFLKHKLPSKRTTLGVLLALLGICLLTFLSTFTINLGDILCI 172
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
++ ++ F + + L L+ V++ L
Sbjct: 173 LSAFSYTIQIILMDHFTKETDSFLLGIWQLGFTGLYGVIFTFLFETPSLPGSGAQWGAIL 232
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ ++F F + + ++ P+ ++ + L + + I ++
Sbjct: 233 GLAIICSAFGFIVQPVAQEYTSPEHTSMLFALEPVFSMIFAYIFLHEKLSLQGAIGAFLI 292
Query: 294 VIAMVV 299
++ +V+
Sbjct: 293 MVGVVI 298
>gi|317475355|ref|ZP_07934619.1| integral membrane protein DUF6 [Bacteroides eggerthii 1_2_48FAA]
gi|316908383|gb|EFV30073.1| integral membrane protein DUF6 [Bacteroides eggerthii 1_2_48FAA]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 84/286 (29%), Gaps = 5/286 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L+ + +G+ P ++ + S EV+++R + + A + +
Sbjct: 1 MKGFLYAALSSSTFGLAPFFSISLLIAGFSSFEVLTYRWGIASLILAIAGIILGEQFRIS 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + + + V I + + ++ F
Sbjct: 61 RKDWQTVFILSLFRATTSFSLVIAYQNIASGVASTIHFMYPLAVAVTMMLFFKEKKSFSI 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS---SEGFFI 198
+ ++ + I +A A++ +Y + +
Sbjct: 121 LFAVFISLIGATLLSTGEIDFEGGDTTTGLVAAAISIFSYGGYIIGVRKSRAVNIPSTAL 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+ LFY++ + G + L + IK +
Sbjct: 181 TCYVMGFGTLFYIIGGCLTDGIRLATDSHTWLNILGLAIPATAVSNISLVKAIKHVGPTL 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I PL IV + K+ TI ++V A+++ +
Sbjct: 241 TSIFGALEPLTAIVIGCCVFKESFTWSSTIGIALIVTAVIIVITRE 286
>gi|255071249|ref|XP_002507706.1| Drug/Metabolite transporter superfamily [Micromonas sp. RCC299]
gi|226522981|gb|ACO68964.1| Drug/Metabolite transporter superfamily [Micromonas sp. RCC299]
Length = 384
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 85/262 (32%), Gaps = 7/262 (2%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
++V++V+ R ++ + + + + + + + +LA
Sbjct: 128 STLAVVQVVFLRFAFATVTMLPVMFASG-------SDSFKTERLHLHIARSILLAAAIAL 180
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
+ L T + + F P+ ++ L +FL E+++ + + L + + ++ G
Sbjct: 181 YCKGLSTAPIAVVTTLNFTIPMFTLLLARLFLDEKVDKTRWLGTLTGFVGVTVVVQPGGA 240
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
+ + V SA FA + G ++ A F + + + + +
Sbjct: 241 SFNPMWLVVLLSAALFAALDVLNKIFVGKESFWAMIFYTAFFTTLISAYPAYLSWVPPST 300
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ + G + + S + Y L V + + T
Sbjct: 301 AQLVLMAFLGGGANLLLYCLLKSFSLVDASALAPFRYIELLWSAVIGALLFAEVPATSTL 360
Query: 288 IVFGIVVIAMVVYLLPTVINSG 309
+ +++ + + + S
Sbjct: 361 VGAAVIIPSTLYIVWAENKKSK 382
>gi|297201286|ref|ZP_06918683.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197712853|gb|EDY56887.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 325
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/280 (11%), Positives = 77/280 (27%), Gaps = 8/280 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G A +LWG T L+ + L +S L+V R L + A L +
Sbjct: 4 GVRLAVLA-LLWGSTFLWIELALRGLSPLQVTFVRCLLGALVLTVACYASGRRLPRGRTV 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
++ + G + + + + LGS +
Sbjct: 63 WRHIVVAAFFCNALPFALFSLGQQTVDSGLAGVLNATTPLWSIA-LGLALGSEHGLRPVR 121
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + +L +G + +A T + L+
Sbjct: 122 LTGLLLGFAGTILILAPWQSAGATGWGALAILGAAASYAVAFTYMGRTLVRRGTPTISLS 181
Query: 205 IPALFYVVWNGFSGGEH-----FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L G + L+ + F + I +
Sbjct: 182 AAQLVAASGLTAVALPVGGLESIDPGPVVVVAALVLSVFCTAITFHLTYRIINDEGATNA 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ Y P++ ++ +L + + + +V++ + +
Sbjct: 242 AVVGYLLPVVSVLLGAVVLGEGLSARVVLGMAVVLVGVGM 281
>gi|229145948|ref|ZP_04274327.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST24]
gi|296503883|ref|YP_003665583.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
gi|228637556|gb|EEK94007.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST24]
gi|296324935|gb|ADH07863.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQAASIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELLDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|226322658|ref|ZP_03798176.1| hypothetical protein COPCOM_00430 [Coprococcus comes ATCC 27758]
gi|225208995|gb|EEG91349.1| hypothetical protein COPCOM_00430 [Coprococcus comes ATCC 27758]
Length = 303
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/291 (9%), Positives = 72/291 (24%), Gaps = 15/291 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL-------- 78
L +F +WG + ++ + R L + I +
Sbjct: 10 LMLFLTAFIWGTAFVAQSVGMDYIGPFTFTCVRSLIGGIFLIPCICFLDKWRAKNDGVER 69
Query: 79 -SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + L V + F + V+ G
Sbjct: 70 QKKVDRKEEKKNVILGGICCGLALCVASNLQQIGIQYTTVGKAGFITALYIVLVPIFGIF 129
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
K+ I+ + + L ++ + + + + +
Sbjct: 130 LKKKA-GVRIWISVAISVAGLYLLCITDKLVLAKGDILVLLCAVVFTIHILVIDYFSPKA 188
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+G I I + + L L + + + K
Sbjct: 189 DGVRIACIQFFITGVLSAIPMFLFETPRLSDIFAAAVPILYAGVLSSGVAYTLQIVAQKD 248
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
A + ++ + ++ IL Q + ++ A+++ LP
Sbjct: 249 ADPTVASLILSLESVFSVLGGWVILGQKLSIREIAGCILMFSAIILAQLPG 299
>gi|120603571|ref|YP_967971.1| hypothetical protein Dvul_2528 [Desulfovibrio vulgaris DP4]
gi|120563800|gb|ABM29544.1| protein of unknown function DUF6, transmembrane [Desulfovibrio
vulgaris DP4]
Length = 289
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 79/285 (27%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A WG T + + + R + + + + L
Sbjct: 4 YLKLLLAAFFWGGTFVAGRIGAAHAGPFALAFLRFTLATAIL---VWHIRRREGALPRVS 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ AT + + F AL T + P++ ++FL E L
Sbjct: 61 GSRNILFVLLLGATGIFAYNALFFTALQTIPAGRAAVVVANNPIVIALGAALFLGEPLTR 120
Query: 146 LQIIAALLIILS----------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ I + + + + ++L + A + S
Sbjct: 121 RKCIGIAISVCGALVAVTRGDPVSFLQGGVSWGDVALVGCLASWAAYSLLGKKAMSSLSP 180
Query: 196 FFIEMCVLAIPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
A A + + + + F F G+ R
Sbjct: 181 LAAVTWSCASGACMLLPFALHEGMLDAITTYTPDVWASIFYLGMFGTALGFTWFYEGVDR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G+ P+ I+S L +P+ + +V+ +
Sbjct: 241 IGAAKAGVFINFVPITAILSGWLFLGEPLSPSLILGAALVLTGVY 285
>gi|330989275|gb|EGH87378.1| hypothetical protein PLA107_29912 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 82/287 (28%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F+ A L+ +++L + ++ + I S GL +
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYVVHTLLMACIFMPSAGLRV 71
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +A+ L T L F+ P++ L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATA-----VNFLAPLLVTALSVPLLH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A ++ + ++I+ G + SA CFA + F
Sbjct: 127 ERVTRGQWVAVVVGFIGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSPT 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LF + + + + FL+ G + + + A + +
Sbjct: 187 TSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAMLA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 247 PFSYCQIVFAGLLGFVVFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|229134224|ref|ZP_04263040.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST196]
gi|228649244|gb|EEL05263.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST196]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 96/295 (32%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWIRFIIAFVVLYAILKTTEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALLL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLIITTHAIFFSLFFITPCMVWELQSSPIEHINMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVIITTFEKQK 295
>gi|86139755|ref|ZP_01058322.1| membrane protein, putative [Roseobacter sp. MED193]
gi|85823646|gb|EAQ43854.1| membrane protein, putative [Roseobacter sp. MED193]
Length = 353
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 105/312 (33%), Gaps = 23/312 (7%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + T+ G V +L+ + + L V +I R + +L + +++
Sbjct: 7 TDAPSLSRTLQGITCVLAGMVLFVGQDVLMKGMLTHYPVWMLIFSRSIVALMTLLPLVLW 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+L + A + A + F A + +F P+++
Sbjct: 67 LGAPHRILTP------LWPWYLARAMLFASGFAMFYTAFPFMGLAEVTTLFFAAPLMTAT 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L ++FL+E++ +I A L+ ++I +G +++ + A +A I V
Sbjct: 121 LAALFLQEKVGAHRIAALLVGFAGVVIAMNPTGGNFGWISVLPLFCALTYAISQIIVRKI 180
Query: 194 ----------------EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
GF I + + V + + N+ L G
Sbjct: 181 GEQDTSLVIGLYTISFSGFVIVPMGFVVTQMIVVSPELNHLRMSWPVPNVKGIAMLALLG 240
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + + + S + A S + +Y+ L + + + + I +++++
Sbjct: 241 AIGTVAYTLVSRAYQIASASVIAPFDYSYLPLAAILAYLLWGEIPPHTTFIGMVLIIVSG 300
Query: 298 VVYLLPTVINSG 309
+ + +
Sbjct: 301 MYTAYRELRVNR 312
>gi|325475178|gb|EGC78363.1| membrane protein [Treponema denticola F0402]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 93/285 (32%), Gaps = 10/285 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ + + + L + + ++ R L + F ++ +
Sbjct: 4 TSKQKGIMFLILSALCFASMNLSAKLAGSLPSMQKAFFRNLIAAVVSFAVLI------NS 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ N K + A + YA+ S + P ++ +FLK
Sbjct: 58 KEKFHLNKKNLPFFFMRAIFGTMGIVGNFYAIEHMLLADASILAKLAPFFAILFSLLFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSEGFF 197
E++ QI+A + + L++ + + A+ + T S
Sbjct: 118 EKIKLYQILAVITAFSASLLIIKPAFADTRHVIAALIGACGGMMAGAAYTCVRCLSLKGE 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ + F ++ + ++ + L+ GL + + A
Sbjct: 178 KGPLIVFFFSFFSILMLFPLFIIFYHPMSLYQIIMLLIAGLFGTGGQFCVTAAYAHAPAG 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ + +YT + + L + D + F I+ A+ +++
Sbjct: 238 SISVYDYTQIVFSAIFGFAFLGELPDRWSLLGFAIIF-AVALFMF 281
>gi|300118357|ref|ZP_07056104.1| EamA family protein [Bacillus cereus SJ1]
gi|298724326|gb|EFI65021.1| EamA family protein [Bacillus cereus SJ1]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKQDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSTPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVLITTFEK 293
>gi|282162745|ref|YP_003355130.1| hypothetical protein MCP_0075 [Methanocella paludicola SANAE]
gi|282155059|dbj|BAI60147.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 316
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 101/285 (35%), Gaps = 14/285 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + WG + + + L Q+S +E+++ R +L VF + +L
Sbjct: 18 LILVNVFWGASSIAAREALLQLSSIEIVTIRFTIALFIVFGMAIAMKKWDALRIHP---K 74
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
++ S + +++ + + +L S + + + +G++ L ERL ++
Sbjct: 75 DIPTFILLSLSNVSIGFILQVESLNYTTVTNFSLEFNLATFFIMLMGALLLGERLTRTKL 134
Query: 149 IAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
A + ++ G + + ++K S +
Sbjct: 135 AGAGIAFAGAFLIISGGRLDLSSAHLLGDLMGVGSAIAFGIFTIASKKVSSKYSLTTILL 194
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L L + + L L + F F ++++G+ R K S
Sbjct: 195 YTFFFGVLELLPFYAFVTPMTPLASLSPLSWSSLLFLAVLCSVFCFFVYTHGLSRLKASD 254
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
V + Y PL I+ +V +L + + V + G+++ M +
Sbjct: 255 VAMSIYVTPLAGILLAVLLLGETLTAVTAVGAGLIMAGMYLTQRE 299
>gi|229823972|ref|ZP_04450041.1| hypothetical protein GCWU000282_01276 [Catonella morbi ATCC 51271]
gi|229786326|gb|EEP22440.1| hypothetical protein GCWU000282_01276 [Catonella morbi ATCC 51271]
Length = 348
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/290 (10%), Positives = 91/290 (31%), Gaps = 11/290 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L+ WG++ + Q+L Q+ V+S R+L + + ++
Sbjct: 50 WKGRLYTILGAASWGLSGVCGQYLMQTAQIPARIVVSIRMLLAGLIMTTYLLACQRPQLK 109
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K V +++F+ + + ++ A+ + + +P++ + S+ +
Sbjct: 110 ALSQDK-RSLVQLVIFALFGIVLCQLTYLEAIGASNAGTATVLQYTSPILVIAYVSLKTR 168
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + A L IL ++ H LS + + +
Sbjct: 169 QAPTGQLLAAIALAILGTALIATHGDITSLSLTPAGLSWGLVAAVGYALYTVLPADLLQR 228
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + + + + + +F G+
Sbjct: 229 HNATLVTGLGLLLGGASLFLANQTWTYPIDWQPLTILAMAGLVVVGTLLAYTLFLKGVAL 288
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ + P+ + + ++ + + + +++ A+V L
Sbjct: 289 VGPMEASLLGASEPISAVFFAFLLMSEHFYLIDLLGMVLIIAAVVWVSLH 338
>gi|237718247|ref|ZP_04548728.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229452431|gb|EEO58222.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 303
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 97/298 (32%), Gaps = 15/298 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A +G+ PL+ + ++SV V+ +R ++ + +
Sbjct: 2 TNKTKGFIYGAIAAASYGMNPLFALPLYAAEMSVDTVLFYRYFFATIVLGILMKMQHQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K + + + + + + S FV PV+ + +F
Sbjct: 62 ALHKADVLPLVIM------GLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVAVIMGIF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
KE+++ + + + LL + + ++ G + L +++++ Y +
Sbjct: 116 FKEKISAITVFSILLALSGIALLYQGDGNKPLSTLGIIFVLLSSLSYAIYIVGVNRSTLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y+V F L L + + I
Sbjct: 176 NLPTTKLTFYAILFGLSVYIVRLNFCTELQIIPSAWLWADVLTLAILPTAVSLICTALAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ P+ + V + + + + +++ A+ + ++ +
Sbjct: 236 HYIGSTPTAILGALEPVTALFFGVLLFHEKLTPRLMVGILMIITAVTLIIIGKSLIKK 293
>gi|46581484|ref|YP_012292.1| hypothetical protein DVU3081 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450906|gb|AAS97552.1| membrane protein, putative [Desulfovibrio vulgaris str.
Hildenborough]
gi|311235134|gb|ADP87988.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
vulgaris RCH1]
Length = 300
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 84/283 (29%), Gaps = 16/283 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A +LW + + + L + +I R+ + + +
Sbjct: 16 IALLLAMLLWSSSFIAMKIALTGFDPMVMIFGRMAIASVIFIAV-----WRRNFSGVRYR 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +++ F YAL + P+ LKE +
Sbjct: 71 AGDWKLLGFMTMCEPCLYFVFEAYALEYTSASQAGMIVAMMPLSVAVAARFVLKEHMARS 130
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTIPVGSSEGF 196
L I ++ ++L + + +T + Y + K + F
Sbjct: 131 AWAGFCLAIAGVVWLSLGGQVTENAPNPMLGNALEVCAMLTATGYVISAKRLSSTYPPLF 190
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ LA F V L P L + + +++YG+ R
Sbjct: 191 ITAVQSLAGFVFFLPVLALPGVTLPTSLPLTPTLAVLYLGVCITLGAYGLYNYGVSRLPA 250
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+L ++ +L + + + +V+ +V+
Sbjct: 251 GQAASYINLIPVLTLIMGRVVLGDELSPSQYLASLLVLAGVVL 293
Score = 39.5 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 47/134 (35%), Gaps = 1/134 (0%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+A+ + F I + + + +AI ++ ++ + + L
Sbjct: 20 LAMLLWSSSFIAMKIALTGFDPMVMIFGRMAIASVIFIAVWRRNFSGVRYRAG-DWKLLG 78
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F +Y ++ S G++ PL + V++ F+LK+ + F +
Sbjct: 79 FMTMCEPCLYFVFEAYALEYTSASQAGMIVAMMPLSVAVAARFVLKEHMARSAWAGFCLA 138
Query: 294 VIAMVVYLLPTVIN 307
+ +V L +
Sbjct: 139 IAGVVWLSLGGQVT 152
>gi|295111091|emb|CBL27841.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Synergistetes bacterium SGP1]
Length = 304
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 80/299 (26%), Gaps = 8/299 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L + +WG + QF + + R + IV F
Sbjct: 1 MDSRALRGNLLLLVTSAIWGFGFIAQQFGSRALPPFSFNACRFALGSASLLPLIVIFGWH 60
Query: 78 LSLLKDTLKNPKAVGMLVFS--ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + ++ + + +F + + LG
Sbjct: 61 DPARRRARAASRRLSVQGGLLNGGVMFLGAWLQQAGIAETTAGQAAFLTGLYILFVPLLG 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+F+ R+ A +L ++ L +++ L + + A V
Sbjct: 121 -LFMHHRVPLTTWCAGILALVGLYLLSVREDLSVSRGDVFEIAGAVFWALHILCIDAYVK 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ A ALF V F L + + +
Sbjct: 180 RTDPLEFSFWQFAFCALFSVGTALSLEPGGFAHVGDALLPILYCGVVSVGIAYTLQVVAQ 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
K + ++ + + +L + + + ++ M++ + +
Sbjct: 240 KDVIPAHAALILSVETVFATLGGAVVLGENLGLRGYVGCVLMFSGMILAQWHGLRGGMR 298
>gi|294651594|ref|ZP_06728900.1| DMT superfamily drug/metabolite transporter [Acinetobacter
haemolyticus ATCC 19194]
gi|292822522|gb|EFF81419.1| DMT superfamily drug/metabolite transporter [Acinetobacter
haemolyticus ATCC 19194]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/289 (16%), Positives = 102/289 (35%), Gaps = 8/289 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++ + + L+ + + +F V ++ R L L I
Sbjct: 1 MPIVSQRHPVVLAIACLTFSAFLFSLMGICIRFASHTVDNYTIVFFRNLVGLILFLPFIY 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + M + + I F YA+ + + +P+
Sbjct: 61 RQG-------TDFVKTEKIWMHTWRSIIGLAAMYGFFYAIAHLELSNAMVFTYSSPIFIP 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F+ +FLKER++ L + AA L + + + L L+I S+ C A + V +
Sbjct: 114 FIAWLFLKERISTLMLCAAALGFIGVFFVAKPDQGLLNWLSIIGITSSLCAAMAFVTVRA 173
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + +G + + + FLI G+L + S+ +
Sbjct: 174 LTQTEPPERIVFYFCFIGALLSGIPMFWVWRPYQLEELFFLIAAGVLANVSQLFMSHAYR 233
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
A + + Y A + + + + DT I FG ++IA+ +
Sbjct: 234 LAPAGQIAPINYVAIIFAGIWGFLLWHELPDTYSLIGFGFILIAIFLCS 282
>gi|159186044|ref|NP_356498.2| hypothetical protein Atu4150 [Agrobacterium tumefaciens str. C58]
gi|159141178|gb|AAK89283.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 99/284 (34%), Gaps = 6/284 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L AY + + + L Q+SV E+ +L+S +F FS
Sbjct: 3 KGFLLGLFAYATFSMGDATIKSLGSQISVFEIGFFSILFSGIFIF-----FSKPREERWR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ A F IYA T F++P+ L +V LKE +
Sbjct: 58 EFWRMSRPFAVHGRAISGLFAGIFGIYAFTTIPLAEAYALIFLSPLFVTVLSAVVLKENI 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A L I+ ++++ L IA A+ A + + S G ++
Sbjct: 118 GPWRWAAVLAGIVGVILVVRPGFKTLELGHIAAIGVAFLAAMTIVLLRSLAGKEKRTSIM 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ + +NG + F + N+ L GL + + A S +
Sbjct: 178 GVLLIYGLTFNGIASIPDFVMPNLHQLLAFAFIGLCTATGQITLLVATRIAPASQIAPSH 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y+ L + + + D + + ++ + ++ ++ +
Sbjct: 238 YSQILWAVAIGMTFFHEYPDAIAALGLAVIAASGLLTMIREKVR 281
>gi|91789719|ref|YP_550671.1| hypothetical protein Bpro_3877 [Polaromonas sp. JS666]
gi|91698944|gb|ABE45773.1| protein of unknown function DUF6, transmembrane [Polaromonas sp.
JS666]
Length = 320
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 90/303 (29%), Gaps = 12/303 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF 74
A+ G L I + + + V + +I +R+L++LP +
Sbjct: 18 HKAAKNIASGLLLAIFGAIAFSGKAIIVKLAYRYGVDAVTLIMYRMLFALPIFAVMAWWA 77
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATI-LAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + K ++ + L L ++ P + +
Sbjct: 78 TYRQGGGRRAPLTRKDWLGVLGLGFTGYYLASFLDFAGLAYVTASLERLILYLNPTLVLL 137
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFA 184
LG V + R+ Q++ + ++++ H + LL AV+++ Y
Sbjct: 138 LGLVMYQRRVAAGQLVGMAISYSGVVLVFGHEITLQGADAAWGALLVFLSAVSYAVYLVY 197
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + L + + + L L+ L +
Sbjct: 198 SGELVRRLGALRLVGLATTVACLLCLLQFAVLRPMSAAVVAPEVIWLSLLNATLCTAAPV 257
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+R S P+ I+ V IL +P +V+ + V+
Sbjct: 258 LMVMMAIERIGASMAAQTGMVGPMSTILMGVLILGEPFTAWVAAGTVLVIAGIFVFSRAA 317
Query: 305 VIN 307
Sbjct: 318 ART 320
>gi|51893248|ref|YP_075939.1| hypothetical protein STH2110 [Symbiobacterium thermophilum IAM
14863]
gi|51856937|dbj|BAD41095.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 335
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 82/262 (31%), Gaps = 11/262 (4%)
Query: 47 LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWG 106
L L + +R+ S+ + + + +L SA LA+H+
Sbjct: 71 LSDAPALVLSFYRLAISVALLAVPALA----RERETLRRLTGRDWLLLAGSAVCLALHFY 126
Query: 107 FFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG 166
+I +L ++ +P I + LG L ER N + + A + + +I+
Sbjct: 127 VWIESLNFTTVASSTVLVTSSPFIVLALGWRLLGERTNRIGLAAVAIGVAGGVIVGWGDF 186
Query: 167 -------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
L + + I V A+ A + G
Sbjct: 187 RVSGSALYGDLLAFLGAVTVSGYTIAGRIARQKMSTTLYTTAVYALAAALLWLMMLPRGI 246
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
LF + +F++ ++ +TV + P++ + + +
Sbjct: 247 PLAPYPPREWALFAALAVIPTILGHNLFNWALRWVSAATVSMCTLGEPVIASALAWILFR 306
Query: 280 QPIDTVRTIVFGIVVIAMVVYL 301
+ + +++ + +++
Sbjct: 307 EAPGWATVVGGILLMAGIALFV 328
>gi|319652740|ref|ZP_08006849.1| hypothetical protein HMPREF1013_03463 [Bacillus sp. 2_A_57_CT2]
gi|317395556|gb|EFV76285.1| hypothetical protein HMPREF1013_03463 [Bacillus sp. 2_A_57_CT2]
Length = 317
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/300 (9%), Positives = 85/300 (28%), Gaps = 11/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L V WG+ Q L +SV +++ R+L + +
Sbjct: 4 RSRSTGLLLVIFGASFWGVGGTVAQKLFQEFGISVDWLVTARLLTAGILLLAVQFLMKDR 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ A+ +L+F + ++ ++ + + ++ P + + +
Sbjct: 64 SQVFGVWKNKRAAIMLLIFGLAGMLAVQYTYMASIHHGNAAVATLLQYLAPAMIIIYLVL 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIP 189
+ + + L + + +S ++ ++ A+
Sbjct: 124 RKQSVFSRQDFVTVSLALAGCFFLLTNSSVSQLSVPAPAIVWGVLSGVALAFYTLYAIPL 183
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + I + + + L F +
Sbjct: 184 LKEYDSLVVVGWAMVIGGSALSLIHPPWQMDFGRLTAEAGLYLFFVIIFGTMLAFWFYIE 243
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + ++ PL + ++V L +P + + +++ L +
Sbjct: 244 SLQTLSPTETSLLSSLEPLAAVFTTVMWLNEPFGMFQWAGTACIFGMILLLALNKQKPAK 303
>gi|284165308|ref|YP_003403587.1| hypothetical protein Htur_2030 [Haloterrigena turkmenica DSM 5511]
gi|284014963|gb|ADB60914.1| protein of unknown function DUF6 transmembrane [Haloterrigena
turkmenica DSM 5511]
Length = 340
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 9/288 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A I WG + L + + + R+ + AI+ T
Sbjct: 9 LFSLLA-IAWGTAFAAIEVGLATLPPILFAAFRLDVATVLFAGAILALGREWRPRTRTDW 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL-------GSVFL 139
V + + + Y + S + VTP +++ L V +
Sbjct: 68 ITIGVAGGLMVGAHYGLLFIGQSYVSSAVAAIVLSLTPIVTPPLALALLPQERLRAPVVV 127
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ ++ L S+ + G+ S S + S +
Sbjct: 128 GLFVGLAGVVVIALSGGSIGGQAIGVGLLFGSAFAFAVGSVLTERLQRTLPVLSLQTWAM 187
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
I G + + + + F + + R S +
Sbjct: 188 ALGAGILHGVSYAHPGETVPSLTAWTSATVAALAYLGVVATAGGFLAYFLLLDRIGASQL 247
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ Y +PL+ + +L + I FG++V+ + LP++
Sbjct: 248 SLVNYASPLVASLVGWALLGESITLTTIGGFGMIVLGFALCQLPSLWR 295
>gi|330445681|ref|ZP_08309333.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489872|dbj|GAA03830.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 316
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 97/301 (32%), Gaps = 23/301 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + V A + WG + + + VL + R +L ++ +
Sbjct: 13 NKSSIAIIGVLAAAVFWGTSFGVAKEAMLYTGVLMFLVIRFCCTLVVIYPLV-------- 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
N K + + IL++ + Y L +F + + + + ++
Sbjct: 65 ---AKKINWKVWRQIAPTGAILSIIYLAETYGLKHTTASNAAFLISLFIIFTPGVDALIN 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARKTI 188
+ ++ + A ++ I + ++ S + A T
Sbjct: 122 RHKIAVTDLFAGVIAIAGVWLLVGDSLNTVDFNIGNILILIAALGRAAFVVTTKKKMDTQ 181
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
P FI++ V+ + +F ++ S F F I +
Sbjct: 182 PSDPMVVTFIQLSVVTLVCIFLLILTVPSEQYVLPNAMNFWLYIGYLVVFCTLFAFYIQN 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
YG+K + V + P+ + + + L + D+++ I G++V A + L
Sbjct: 242 YGVKHTSPTQVSFLLGLEPVFGGLFAHWWLGERFDSIQWIGAGLIVFAAMFISLKFSFRR 301
Query: 309 G 309
Sbjct: 302 R 302
>gi|310659529|ref|YP_003937250.1| hypothetical protein CLOST_2225 [Clostridium sticklandii DSM 519]
gi|308826307|emb|CBH22345.1| conserved membrane protein of unknown function [Clostridium
sticklandii]
Length = 308
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 87/294 (29%), Gaps = 13/294 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L VF + + + + + + ++ ++ R + +F L L
Sbjct: 10 IKGELLVFLSAMGFATMGVLGKMAYSYGLNTTTLLFLRFFIAAIILFLVSHILKRPLKL- 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ F + + Y+L LT+ +F P+ F KE
Sbjct: 69 ----NAKDGIIAFGFGFIGYNLVSFCYFYSLNFIPASLTAVIFFTYPIFVTLFSFAFFKE 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT------IPVGSSEG 195
+L +I++ +L + +L + + I + V +
Sbjct: 125 KLTPNKILSLVLGSVGILSIVSPGKAQIDYRGIIFSLLGGILYAFYVLGLSLPRVKKIDS 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ AL + S + + + + S G+KR
Sbjct: 185 VKMSYYTNIFAALGMGIAAIVSNTFIYPINIFALSYAALIGIFATSVAMLALFAGVKRIG 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ ++ + L + + + + +++ + ++ LP
Sbjct: 245 AVKGSIIANMEIVIACILGAAFLNEKMGIYQLMGAVLIITSAIMVSLPNKALKK 298
>gi|300812389|ref|ZP_07092823.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496635|gb|EFK31723.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 303
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 94/297 (31%), Gaps = 10/297 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L LWG + + L Q ++ ++ R + + + G
Sbjct: 6 LGILLAITGAALWGTSGTAAEMLYQNPNINTFWLVDVRSWLAGASLLLISLVHKG-KGTF 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +FS + + Y + + F+ PV+ + + ++
Sbjct: 65 AIFKNPRDLLYAALFSMLGITGAQFTYFYTVAASNAPTATVLVFLAPVLIICFMAAKTRQ 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF----- 196
+ +IA LL ++ +++ + L++ + A +
Sbjct: 125 MPRRIDLIAVLLAVVGTVVLVTNGNFSHLTVTPKTLVWGFFSALTQALAIAMPAKLFKKY 184
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + ++ + + +L + F + ++ +
Sbjct: 185 GTITILAWGMLLGGIILSPALALMPATGVTVKEWSLVIYIVIAGTVFAYSLYLSSVMYIS 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++E PL+ + SV +L ++ ++++A + ++P+ +
Sbjct: 245 AGLASMLEAFEPLVATILSVTLLGSDFGIMKMAGGVLIILATCLQVVPSPRRGKLRR 301
>gi|300703229|ref|YP_003744831.1| hypothetical protein RCFBP_10891 [Ralstonia solanacearum CFBP2957]
gi|299070892|emb|CBJ42194.1| conserved membrane protein of unknown function, DUF6, putative
transporter [Ralstonia solanacearum CFBP2957]
Length = 310
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 83/278 (29%), Gaps = 4/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + LWG + L+ + + +I+ RV + + + GGL +L+
Sbjct: 6 VLELLTLAALWGGSFLFMRVAAPPFGPVALIALRVAIASAFLLPVL-AMRGGLGILRAQW 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ AVG+L + + + F V +LG R+
Sbjct: 65 PHLLAVGILNSAIPFCLFAYAELTLTAGFTSVLNAAAPLFAAIVAFAWLGERMSSWRVLG 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--FIEMCVL 203
L I +I+L L +G L++A A+ + + G
Sbjct: 125 LAIGFVGVIVLVGGSSALDAGQGGLAVAAALGATVLYGLASSYTKRHLTGVPPLAVATGS 184
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A + + + +F + + +
Sbjct: 185 QVAAAIVLAPLAVWLWPAHTPTGGVWFHVIGLGIACTGIAYILFFRLVAHVGPTRAVSVT 244
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P+ ++ + L +P+ ++++ +
Sbjct: 245 FLIPVFGVLWGILFLHEPLTLNMVAGCAVILLGTSLST 282
>gi|160934330|ref|ZP_02081717.1| hypothetical protein CLOLEP_03201 [Clostridium leptum DSM 753]
gi|156867003|gb|EDO60375.1| hypothetical protein CLOLEP_03201 [Clostridium leptum DSM 753]
Length = 288
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 90/274 (32%), Gaps = 10/274 (3%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A +L+G + F+ ++ E++ R L + + G K+ K
Sbjct: 9 IFALLLFGSNGIVASFIR-MNSYEIVLLRTLLGSFLLLAIFILSKGKF----TFYKSKKH 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
L S + W A + S Y+ PVI + L + +E+L ++I
Sbjct: 64 FLYLTISGISMGTSWMLLYEAYARIGVSIASLLYYCGPVIVMVLSPLLFREKLTIYKVIG 123
Query: 151 ALLIILSLLI-----MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ ++ ++ + + S G L I
Sbjct: 124 FISVLCGAFFVNSNALSGDGDTFGVICGVLSAVMYAFMVIFNKKATSITGLENSTLQLII 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L V+ G G + LI + + I + +V + Y
Sbjct: 184 SFLTVAVFVGIKQGFVMVISTESTLPLLILGFINTGIGCYFYFSSIGNLPVQSVALCGYL 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
PL ++ S+ IL++ + +++ I +++ ++
Sbjct: 244 EPLSAVMLSMLILRETMLSMQIIGAVLILGGAIL 277
Score = 38.7 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 41/114 (35%)
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I + + + + S G+ F + L+L G+ + +
Sbjct: 26 RMNSYEIVLLRTLLGSFLLLAIFILSKGKFTFYKSKKHFLYLTISGISMGTSWMLLYEAY 85
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
R +S ++ Y P++++V S + ++ + + I F V+ +
Sbjct: 86 ARIGVSIASLLYYCGPVIVMVLSPLLFREKLTIYKVIGFISVLCGAFFVNSNAL 139
>gi|77414355|ref|ZP_00790511.1| membrane protein [Streptococcus agalactiae 515]
gi|77159590|gb|EAO70745.1| membrane protein [Streptococcus agalactiae 515]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 101/296 (34%), Gaps = 10/296 (3%)
Query: 29 FVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
A + WGI+ + Q+L V V + S R+L + + ++ L+ +
Sbjct: 1 MTLAAGLAWGISGISGQYLMSHGVHVNLLTSLRLLITGIFL-LSLARSKQKEHLVAAWKQ 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L+FS L ++ F+ A+ + ++ P++ + + + ++R
Sbjct: 60 PKFLKQVLLFSIFGLVLNQYAFLRAIHLTNAGTATVLQYMAPILILSIVCILNRQRPTSF 119
Query: 147 QIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+IIA + IL ++ H L + + + + + G I
Sbjct: 120 EIIAIAMAILGTYMIATHGKLGSLAITPKGLMWGLGSAITYSIYILLPVKLIHEWGSTIV 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + + ++ G+ F + F G+
Sbjct: 180 IGSGMFIGGILFSLVTKAWQYPLQINVMSILAYIGIIGIGTIFAYTFFLKGVSIVGAVKG 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ P+ + +V +L + + + + +A+ + +I K K K
Sbjct: 240 SLLASVEPVSSVFLTVLVLGEIFYPIDLLGMLFIFLAVTLISYKDLIALKKMKRVK 295
>gi|330951830|gb|EGH52090.1| hypothetical protein PSYCIT7_10704 [Pseudomonas syringae Cit 7]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 79/288 (27%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLS 79
+ G F+ A L+ +++L + ++ R L + + +G
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYLVHTLLMACIFMPSAGLRV 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + ++L FI + + L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATAVNFLAPL------LVTALSVPLL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ Q IA ++ + ++I+ G + SA CFA + F
Sbjct: 126 HERVTRGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSP 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + + + + FL+ G + + + A + +
Sbjct: 186 TTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAML 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 246 APFSYCQIVFAGLLGFVVFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|260463545|ref|ZP_05811744.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259030636|gb|EEW31913.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 3/288 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L VF + ++W +F+ VI R +W+ + + + G +L+
Sbjct: 1 MLLVFLSALMWSFGGTIARFITVGDSWTVIFWRSVWAAAFLLSFMAWRDGWRGMLRSF-- 58
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ A+ F+ AL P+++ V +ER+ +
Sbjct: 59 -RDMGLPGLAVGFCFAIASTSFVVALAYTTVANILLMQAGVPLLAALFAWVLFRERVTVV 117
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+A +I + IM S +S F V + + M
Sbjct: 118 TWVAIAAVITGVAIMVSESLDGAVSPMGDGLALLIAFMFSIATVITRRFSSVRMTPATCL 177
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
S F + + F+ G + + ++
Sbjct: 178 GTILAAGLAASQASTFAVSASDMGFLFAFGVVNLGIGLAFFATGARLVPAAIAALLGTFE 237
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P+L + I + I +VV A++V++ + +
Sbjct: 238 PILGPIWVWLIHSEVPSGRTIIGGAVVVTALLVHIGLEFKRQARPQRA 285
>gi|300362972|ref|ZP_07059142.1| DMT superfamily drug/metabolite transporter [Lactobacillus gasseri
JV-V03]
gi|300353022|gb|EFJ68900.1| DMT superfamily drug/metabolite transporter [Lactobacillus gasseri
JV-V03]
Length = 309
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 99/307 (32%), Gaps = 16/307 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 6 TRSRLWTVLAALAAVMWGISGLFAESLFKISSKITPIWLTQVRLIISGIVLLIIATIL-- 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + ++ + L F+ + + + F+ P + +
Sbjct: 64 HQKPILVLKNKKNTLHIIAYGVFGLLPVQIFYFIVIEMANASIATILQFIGPFFVLAYLA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTI 188
+ ++ L L ++AA++ + + ++ H + ++ A
Sbjct: 124 LTHQQVLRRLDVLAAIVAFIGVFFLSTHGNLNHLAITPVALFFGLLSALGEASYTLIPVK 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V + + L V+++ L F I +
Sbjct: 184 IVKRISSLVLTGWGMIFAGLGLVIFHPSFPAVPN--TPKVWLWVGAIIILGTIVPFQIMA 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K STV +++ PL V SV I + + + +V+ A++
Sbjct: 242 NALRYVKPSTVSLLDAFEPLSATVGSVLIFGLVMSGMDWLGTFLVIGAVLALNFTPKRKI 301
Query: 309 GKNKTKK 315
K K+
Sbjct: 302 KKTSEKR 308
>gi|317152057|ref|YP_004120105.1| hypothetical protein Daes_0334 [Desulfovibrio aespoeensis Aspo-2]
gi|316942308|gb|ADU61359.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
aespoeensis Aspo-2]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 91/283 (32%), Gaps = 17/283 (6%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + LWG T + + L Q + + R + + + G L L+ P
Sbjct: 13 LIISMALWGGTWVAGRVLAQSIHPMSAAFLRFVLASAMLVAMCCRADGHLPRLRRDQILP 72
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
AT + ++ FF L T + PV + ++F KER ++I
Sbjct: 73 VLFL----GATGVFIYSYFFFTGLQTIPAGRAALIVACIPVCISIISALFYKERFGPVRI 128
Query: 149 IAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ ALL ++ + ++ G ++ +A + R + S
Sbjct: 129 VGALLSLVGVSVVIADGNPLALLSGGVSRGDFMILGCVASWTAYSLGGRVAMKSLSPLTA 188
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
C+ L G G+ + L + + I
Sbjct: 189 VTWSCLFGTLMLLVPAVAGGLVGDVIKARAVDWVCLGFLGILATGLAYFWYYQAIAVIGA 248
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S GI T P+ ++ IL +PI + +VV + +
Sbjct: 249 SRAGIFINTVPVFAVIMGALILGEPIHLSLLVGGCMVVSGVYL 291
Score = 40.7 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 35/131 (26%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
I++ + + S + + V + G L L
Sbjct: 15 ISMALWGGTWVAGRVLAQSIHPMSAAFLRFVLASAMLVAMCCRADGHLPRLRRDQILPVL 74
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F G++ ++ P+ + + S K+ VR + +
Sbjct: 75 FLGATGVFIYSYFFFTGLQTIPAGRAALIVACIPVCISIISALFYKERFGPVRIVGALLS 134
Query: 294 VIAMVVYLLPT 304
++ + V +
Sbjct: 135 LVGVSVVIADG 145
>gi|99081728|ref|YP_613882.1| hypothetical protein TM1040_1887 [Ruegeria sp. TM1040]
gi|99038008|gb|ABF64620.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 310
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/293 (10%), Positives = 96/293 (32%), Gaps = 8/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ M G ++ + + +++ + E R L L + I
Sbjct: 14 PTSNPMRGVFWMLVTGLNFVAVTALVKYMGPRIPPAESAFLRYLLGLVFLIPMI------ 67
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+K + G+ + A+ + +A+ + +++PV ++
Sbjct: 68 -RSIKAVEWTSQLHGLFALRGAVHALGVIMWFFAMTRIPLAEVTAMNYLSPVYVTLGAAI 126
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F+ E+L +I A + +L ++++ + +A+ + + F + + G
Sbjct: 127 FMGEKLAFRRIAAVGVALLGVVVILRPGFREVSPGHLAMLITGFAFGLSYLLAKTMVGRT 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+A+ +++ + ++ + + L G + + A L+
Sbjct: 187 NPTVVVAMLSIWVTIGLAPFALANWVTPTLFELALLFGVACFATAGHYTMTLAFASAPLT 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + + + +D + +++ A+ + +
Sbjct: 247 VTQPVTFLQLIWATLLGALAFGESVDVWVVVGGTMILGAVTFITWREAMVKRR 299
>gi|194468013|ref|ZP_03073999.1| protein of unknown function DUF6 transmembrane [Lactobacillus
reuteri 100-23]
gi|194452866|gb|EDX41764.1| protein of unknown function DUF6 transmembrane [Lactobacillus
reuteri 100-23]
Length = 305
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 11/295 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIV 72
E +S M G ++ A +WGI+ Q + Q + ++S R + + V
Sbjct: 1 MEKSSSQVMKGIIWAAVASAMWGISGTVLQLISQNLAIPATWMLSMRTFSAGVILLVISV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + A+ ++ ++ L + F YA+ T + +++P+ V
Sbjct: 61 FLYG-KKIFNVFKTRATAISVISYAILGLMANLLTFYYAIQTGNASAATILQYLSPLFIV 119
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFAR 185
G VF+ R IIA ++ ++ + + L+ + +A +
Sbjct: 120 LGGIVFMHRRPFRSDIIAFIVALIGVALCITRGNFTQLALPFVSLLWGLGSGITAAFYVV 179
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + A + F
Sbjct: 180 LPQRAADENPPIVVLGWGTMIAGVLFNLYQPFWVNPPHITTTLVASVATVVLFGTILPFG 239
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
I + + A V IM+ P+ + SV K ++ + +V+IA+ +
Sbjct: 240 ILLHATRYAPSDVVSIMDAVQPITTSILSVIFFKLNLNWAEILGIILVIIAVYIL 294
>gi|328950398|ref|YP_004367733.1| protein of unknown function DUF6 transmembrane [Marinithermus
hydrothermalis DSM 14884]
gi|328450722|gb|AEB11623.1| protein of unknown function DUF6 transmembrane [Marinithermus
hydrothermalis DSM 14884]
Length = 285
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 84/286 (29%), Gaps = 13/286 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + W + LE + ++ R L + + L +D
Sbjct: 6 LAALAVTILFWASAFAGIRAALEGYTPGQLALLRFLVASLVLGGYAFLRRMPLPAPRDWP 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + V+ Y LT S PVI+ L +VFL ERL
Sbjct: 66 AFLALGFLG------ITVYHVALNYGELTVTAGAASLLIASGPVITALLATVFLGERLKP 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIE 199
+ ++ L G + +A ++ F + I
Sbjct: 120 AGWAGIATSFAGVALIALGEGEGVRFDPGAALILLAAFSTSLYFVFQKPLHARYTPIQIT 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L LF +V+ + + + ++Y + RA + V
Sbjct: 180 AYTLWAGTLFMLVFAPGLPEAVARAPLEATLSVVYLGVFPAALAYVTWTYALSRAPAAIV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y +P + I+ + L++ + + I +I +++
Sbjct: 240 TSFLYASPAVAILIAWVWLRETPTLLSLLGGAIALIGVLIVNTRGR 285
>gi|255527939|ref|ZP_05394781.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|255508366|gb|EET84764.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
Length = 283
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 99/274 (36%), Gaps = 9/274 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A L+G++ L+ + L + + ++ RV++S +F + Y + L +
Sbjct: 13 FAVFLFGLSGLFGKLLS-LPSMIIVLGRVVFSSIFLFTLMFYLKKDIKLKEKKH-----Y 66
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
L+ ILA+HW F ++ T + ++ PV FL F KE++ I+ A
Sbjct: 67 FYLIVMGIILAIHWSTFFKSIQTATVAIGLLTFSTFPVFVTFLEPYFFKEKIKLRDIVIA 126
Query: 152 LLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
++ L +L + + + + + + + +
Sbjct: 127 VITFLGVLFVVPKFQLGNNLTQGVLWGIVSGFTYAILSMMNRKYVKEYSSSLIAFYEQFV 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+V E + L ++ + +F G+K K T GI+ P+
Sbjct: 187 AAIVLMPSLFFEKPVFSSRDIVLLIVLGTVFTGISHSLFINGLKNIKTQTAGIISSLEPV 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
IV + F+L + + I++ + +
Sbjct: 247 YGIVFAAFLLGEIPTLREILGGIIILGTVFYSTI 280
>gi|311232685|gb|ADP85539.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
vulgaris RCH1]
Length = 289
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 79/285 (27%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A WG T + + + R + + + + L
Sbjct: 4 YLKLLLAAFFWGGTFVAGRIGAAHAGPFALAFLRFTLATAIL---VWHIRRREGALPQVS 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ AT + + F AL T + P++ ++FL E L
Sbjct: 61 GSRNILFVLLLGATGIFAYNALFFTALQTIPAGRAAVVVANNPIVIALGAALFLGEPLTR 120
Query: 146 LQIIAALLIILS----------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ I + + + + ++L + A + S
Sbjct: 121 RKCIGIAISVCGALVAVTRGDPVSFLQGGVSWGDVALVGCLASWAAYSLLGKKAMSSLSP 180
Query: 196 FFIEMCVLAIPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
A A + + + + F F G+ R
Sbjct: 181 LAAVTWSCASGACMLLPFALHEGMLDAITTYTPDVWASIFYLGMFGTALGFTWFYEGVDR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G+ P+ I+S L +P+ + +V+ +
Sbjct: 241 IGAAKAGVFINFVPITAILSGWLFLGEPLSPSLILGAALVLTGVY 285
>gi|237723646|ref|ZP_04554127.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229437994|gb|EEO48071.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 85/294 (28%), Gaps = 8/294 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+++R + +
Sbjct: 1 MNRIKGILYAAVSSATFGLAPFFSISLLAIGYSSFEVLTYRWGVATVVLLVFAFLTKCDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + +L + T ++ + A + V ++VF
Sbjct: 61 HIGYKNFKTIFGLSLLR-ALTSFSLVIAYQNIASGVASIIHFMYPLAVAVTMAVFFREKK 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS----- 193
+ + +LS + + G ++ L A +
Sbjct: 120 SIVTFAAIVLSLVGASLLSSGNIEYNGGNRMVGLIAACISVFSYAGYIIGIRKTRAVEVN 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ LF + + G + I + +K
Sbjct: 180 STVLTCYVMGLGALLFLLGGLFYDKGVRWETNVITWLYIGGLALPATAISNITLVKAVKL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + ++ PL ++ VF+ + T + +VVI++ + L
Sbjct: 240 AGPTLTSLLGALEPLTAVLVGVFVFNELFTTYSALGIILVVISVSLVLFQQKRT 293
>gi|229128645|ref|ZP_04257623.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-Cer4]
gi|228654838|gb|EEL10698.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-Cer4]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQAASIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
K S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 KLLDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|229187903|ref|ZP_04315014.1| Permease, drug/metabolite exporter [Bacillus cereus BGSC 6E1]
gi|228595565|gb|EEK53274.1| Permease, drug/metabolite exporter [Bacillus cereus BGSC 6E1]
Length = 298
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 99/300 (33%), Gaps = 13/300 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + WG + L+ + LE V +++ R + +
Sbjct: 1 MKPIKANLMILLVTMTWGTSYLFMKIGLETVPSFSLVALRFGIAFLVCAAVFFKQFRSIH 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +L V I L T F +T + L V
Sbjct: 61 FVTLKYG--------FILGFLLFVVSASVILGLKTTSASNAGFLASLTVIFIPLLSIVLF 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEG 195
K+RL++ II++L+ + + ++TL++ + L S +A + A+ +
Sbjct: 113 KDRLSYRLIISSLVAMTGIGLLTLNNQLTLNSGDLLCILAALFYAFHIIVTGRAAKVANT 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L ++ L+ ++F + I + K
Sbjct: 173 LQLGILQLGFAGGLGLLSALIFEEPQLPSTKESWIAVLVLSIFCSAFAYIIQAMSQKYTT 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ G++ P+ + + + + + T I +++ +++ + S K+
Sbjct: 233 PTHTGLIFSLEPVFSALFAYLFMNELLSTQGYIGALLILSGVILAEIKVKRKSTFKAKKR 292
>gi|261420718|ref|YP_003254400.1| hypothetical protein GYMC61_3369 [Geobacillus sp. Y412MC61]
gi|319768388|ref|YP_004133889.1| hypothetical protein GYMC52_3399 [Geobacillus sp. Y412MC52]
gi|261377175|gb|ACX79918.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y412MC61]
gi|317113254|gb|ADU95746.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y412MC52]
Length = 310
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 92/300 (30%), Gaps = 15/300 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG+ + L E S + + + R+L + V + + +
Sbjct: 7 YALLIAIMVAWGLNVTALKILVEHFSPVALTALRILTAGLVVLLFLWGIGKLQKVSWNEA 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + A + L + P+++ L VFL +R
Sbjct: 67 KQIGLAALFSVVAHHFFLA-----LGLARTTAVNAGLVLGMVPLVTALLAIVFLGQRPTL 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+++ L ++ + + L L+I + + I + +E V+
Sbjct: 122 FRLLGIALGFFGVVFVVANGDGGLGHLSIGDVYIFLAVLAQGISFIMIKKATVEARVMTG 181
Query: 206 PALFYVVWNGFSGGEHFFLGN---------IPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + F +FL + + ++ ++
Sbjct: 182 WMLVFGSLWLFVLSLVLEPSGLSSLKEGTLPLWMIFLASAVVATALGHMFYNQAVQHLGP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + PL ++ + ++L +PI ++ F +V ++ + + K+
Sbjct: 242 AESAVFINLNPLFSLLGAHWLLGEPISWMQLAGFLFIVAGVMFGSGGMDDVIARFRRAKA 301
>gi|193083935|gb|ACF09612.1| permease drug/metabolite transporter (DMT) superfamily [uncultured
marine crenarchaeote AD1000-325-A12]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 97/286 (33%), Gaps = 4/286 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + + A ++WG + + +E + ++++R L ++P + F ++ L
Sbjct: 2 NSKQLGIIEIIIATLIWGTLGIIIKSIE-MEPASIVAYRSLIAVPIMIF-LLRKKVHLIK 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K K +LV S + + W A T + PV L + LK
Sbjct: 60 NKKKEKKKGNFMLLVLSGIAITLAWTAHFSAFKLTSIANTVILLYTGPVYVAVLSPLLLK 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E I +L +L +L++ + S FA I ++
Sbjct: 120 EVREKRANICLILSVLGMLLIYNQGLGNELNNKGLLFGALSGILFAFVIISTKKLSKYYS 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++ + + + L L + + ++ G+ +
Sbjct: 180 SITIVGTQIIISAIILSPELVVEREVIINNIILLLTLGIIHTAIAEFLYIDGLIKISAQK 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ Y P I+ ++ + + + + ++ ++ ++ + +
Sbjct: 240 ASTISYIEPASAIIYAIILFNEIPQGLEIVGITLIALSNLILNIKS 285
>gi|225028749|ref|ZP_03717941.1| hypothetical protein EUBHAL_03028 [Eubacterium hallii DSM 3353]
gi|224953940|gb|EEG35149.1| hypothetical protein EUBHAL_03028 [Eubacterium hallii DSM 3353]
Length = 321
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/319 (10%), Positives = 86/319 (26%), Gaps = 30/319 (9%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ T+F+F ++WG + + ++ + I R + + I+
Sbjct: 3 MKTHKIRDTIFLFLTAMIWGAAFVAQSVSMDYIGPFTFICLRSVIGGLFLIPVIMVIDNI 62
Query: 78 LSLLKDT------------------------LKNPKAVGMLVFSATILAVHWGFFIYALL 113
+ KN + + + L + F +
Sbjct: 63 RKKRRSESVKTASDNGINSFQKMQAEEEKLSWKNKRLLESGIVCGIFLFLANCFQQTGIQ 122
Query: 114 TRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA 173
F +I +G F K L I ++ + L + + + +
Sbjct: 123 YTTVGKAGFITTFYIIIVPVVGLFFKKYC-GILTWIGVVIALAGLYFLCITEKMTIQRGD 181
Query: 174 IAVTWSAYCFA----RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ ++ + +G + + + + +
Sbjct: 182 ALILCCSFLYTGQILAIDHYNPFVDGVKMSCIQFLTGGMLGAICMFLFESPNMAMILNAA 241
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
L + + + G K + ++ + +S L Q + T I
Sbjct: 242 GPILYTGIMSTGVGYTLQILGQKGLNPTVAALIMSLESVFSALSGYLFLHQVLTTRELIG 301
Query: 290 FGIVVIAMVVYLLPTVINS 308
++ IA+V+ LP +
Sbjct: 302 CALMFIAIVLAQLPDIRRK 320
>gi|212693327|ref|ZP_03301455.1| hypothetical protein BACDOR_02839 [Bacteroides dorei DSM 17855]
gi|265753715|ref|ZP_06089070.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|212664092|gb|EEB24664.1| hypothetical protein BACDOR_02839 [Bacteroides dorei DSM 17855]
gi|263235429|gb|EEZ20953.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 84/294 (28%), Gaps = 8/294 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+++R + +
Sbjct: 1 MNRIKGILYAAVSSATFGLAPFFSISLLAIGYSSFEVLTYRWGVATVVLLVFAFLTKCDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + +L + T ++ + A + V ++VF
Sbjct: 61 HIGYKNFKTIFGLSLLR-ALTSFSLVIAYQNIASGVASIIHFMYPLAVAVTMAVFFREKK 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS----- 193
+ + LS + + G ++ L A +
Sbjct: 120 SIVTFAAIVLSLVGASFLSSGNIEYNGGNRMVGLIAACISVFSYAGYIIGIRKTRAVEVN 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ LF + + G + I + +K
Sbjct: 180 STVLTCYVMGLGALLFLLGGLFYDKGVRWETNVITWLYIGGLALPATAISNITLVKAVKL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + ++ PL ++ VF+ + T + +VVI++ + L
Sbjct: 240 AGPTLTSLLGALEPLTAVLVGVFVFNELFTTYSALGIILVVISVSLVLFQQKRT 293
>gi|23501505|ref|NP_697632.1| hypothetical protein BR0618 [Brucella suis 1330]
gi|23347413|gb|AAN29547.1| membrane protein, putative [Brucella suis 1330]
Length = 338
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 97/294 (32%), Gaps = 14/294 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 34 EMNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWR 88
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 89 GQLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAIL 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 149 HEVVRFYRWSAVLIGLFGVMIIIWPRLTLFSAESVGRDEAVGALAALGAAVMSAVAMMLV 208
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ ++ V S + + N L+G G + +
Sbjct: 209 RRLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTEC 268
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 269 YRHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 322
>gi|325126589|gb|ADY85919.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 303
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 95/298 (31%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L LWG + + L Q ++ ++ R + + + G
Sbjct: 6 LGILLAITGAALWGTSGTAAEMLYQSPNINTFWLVDVRSWLAGASLLLISLVHKG-KGTF 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +FS + + Y + + F+ PV+ + + ++
Sbjct: 65 AIFKNPRDLLYAALFSMLGITGAQFTYFYTVAASNAPTATVLVFLAPVLIICFMAAKTRQ 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF----- 196
+ +IA LL ++ +++ + L++ + A +
Sbjct: 125 MPRRIDLIAVLLAVVGTVVLVTNGNFSHLAVTPKTLVWGFFSALTQALAIAMPAKLFKKY 184
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + ++ + + +L + F + ++ +
Sbjct: 185 GTITILAWGMLLGGIILSPALAVMPATGVTVKEWSLVIYIVIAGTVFAYSLYLSSVMYIS 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V ++E PL+ + SV +L ++ ++++A + ++P+ +
Sbjct: 245 AGLVSMLEAFEPLVATILSVTLLGSDFGIMKMAGGVLIILATCLQVVPSPRRGKLQRK 302
>gi|319937142|ref|ZP_08011549.1| hypothetical protein HMPREF9488_02384 [Coprobacillus sp. 29_1]
gi|319807508|gb|EFW04101.1| hypothetical protein HMPREF9488_02384 [Coprobacillus sp. 29_1]
Length = 298
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/276 (10%), Positives = 82/276 (29%), Gaps = 15/276 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G++F+F A ++WG + + + ++ ++ ++ R + + + L
Sbjct: 2 SQKLKGSVFLFIAALIWGSSFIVMKSAVDFLTPAVLLLIRFVLAAIFLAILFFSKIKNL- 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + L + + L +F V I FL +
Sbjct: 61 -------SKENILGGMLTGCCLFAAYYVQTWGLSFTTPGKNAFLTAVYCAIVPFLVWIIH 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---- 195
+R + IAA + IL + ++L+ + + + + +A + +
Sbjct: 114 HKRPDIYNFIAAFICILGIGCVSLNGDLSINIGDLLTLCGGFLYAIHILMIKKFSTGVDG 173
Query: 196 --FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F + V + + + + G K
Sbjct: 174 GAFTTFQFIGGACVALVVTVLSEDITLVGHIQSSIFLQLFYLAFFATAVTMVCQTIGQKY 233
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
++ + + SV + + +
Sbjct: 234 TSECNASLILSLESVFGVAFSVIFYGEILTLKVILG 269
>gi|304385634|ref|ZP_07367978.1| DMT family permease [Pediococcus acidilactici DSM 20284]
gi|304328138|gb|EFL95360.1| DMT family permease [Pediococcus acidilactici DSM 20284]
Length = 303
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 90/297 (30%), Gaps = 11/297 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFA 70
+ + G + A +WGI+ Q + Q + +S R +
Sbjct: 1 MENNLTNKQVGKGIFWALIASCMWGISGTVLQVISQGESIPASWFLSART-SGAGVLLLI 59
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
I + + + + + ++ L + F ++ + +++P+
Sbjct: 60 ISFIKYRMRIFDVFKSLRTVLWLFAYAIFGLMANLLTFYMSVQEGNASAATILQYLSPLF 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCF 183
V +F ER +IA ++ +L + + H L I +A +
Sbjct: 120 IVLGSLIFKHERPMRSDLIAFVIAMLGVFLAITHGNIHSLAISNSALIWGILSGVTAAFY 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
P+ I + I + + +
Sbjct: 180 VVLPKPITKDHSPMIVLGWALIIGGILFNIHQPVWVNTPEITTRLVLSMATVILVGTILP 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F + + A + V I++ P++ V S+ L + I +V++A+ +
Sbjct: 240 FWALLHSLNFAPSAVVSILDAVQPVVTFVLSLLFLNLKFNITELIGSILVIVAITII 296
>gi|294793204|ref|ZP_06758350.1| transporter [Veillonella sp. 6_1_27]
gi|294456149|gb|EFG24513.1| transporter [Veillonella sp. 6_1_27]
Length = 314
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/304 (10%), Positives = 94/304 (30%), Gaps = 12/304 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
++G + +LWG++ QFL +++ +++ R L + + +F
Sbjct: 1 MKQYEVIGVIITLLGAVLWGVSGASVQFLSNFRDMNLEWLVTMR-LITAGLLTVIYAWFR 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G S+ +G+++F +A+ + ++ + + ++ P + +
Sbjct: 60 FGNSIFNVFHSVKDTLGLIIFGVFGMALCQYTYFRSIALAGAGIATVLQYLAPSMIIIYL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKT 187
V +R + + ++ +L ++ + + + + +L + ++
Sbjct: 120 LVRYGKRPSKGETVSVILALVGTICLMGNGDGLSIKSFPMAVLVWGLLSAVGVAVYSISP 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + G + + + L F +
Sbjct: 180 VDLLYKYGTLPIVGFGMFISGIVAAILFHQPNSYAVWDAWTIIGCFNVIFLGTIVSFNAY 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G+KR I+ P+ L + I +++ +V+
Sbjct: 240 LEGVKRIGAVPGSILSSIEPISAAFFGWAFLGNEFSLLGLIGMAMIIATVVIIAWDRQRT 299
Query: 308 SGKN 311
+
Sbjct: 300 IKRE 303
>gi|289524109|ref|ZP_06440963.1| putative integral membrane protein DUF6 [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502765|gb|EFD23929.1| putative integral membrane protein DUF6 [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 304
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 14/306 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFS 75
N T+ G V A +WG F+ V + R+ S I
Sbjct: 2 NTLESTVRGIFLVLGATTIWGTNGPVVHFVNGFGVGPFLITLFRITVST---CIIIYLAP 58
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S L K + S+ L A L +T Y+ P+ ++
Sbjct: 59 KPRSALIIPRKEEMGRALFWLSSLGLISSNLGLSIAFLRISVGMTMIMYYTAPIWAMIGA 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS---------AYCFARK 186
+ER + +QI+A +L + + G L I + + R
Sbjct: 119 WAIARERPSLVQILALILSLSGVYFAVWDPGEGLKFDIIGILCALAGGAGYALYLLNGRY 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ S +++ + A + G + F + ++ F +
Sbjct: 179 GLGKKSQYKAYLQSFLWASVICWVAGLYGGKAADLFKAPPKAYLGLMYMALCTSAIAFGM 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S +K S ++ + L ++ + +L + + I + IA+++ L +
Sbjct: 239 ISRSLKYLSSSIASVLSMSEIPLSMMWAFLLLGERPEKSAIIGGVFICIAVIMLSLEPLF 298
Query: 307 NSGKNK 312
NK
Sbjct: 299 YCRSNK 304
>gi|255321833|ref|ZP_05362983.1| transporter [Campylobacter showae RM3277]
gi|255300937|gb|EET80204.1| transporter [Campylobacter showae RM3277]
Length = 299
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/298 (10%), Positives = 87/298 (29%), Gaps = 11/298 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S G ILWG + + Q+L + VS ++ +R+ + + + S
Sbjct: 3 SQSEFFGVFITLLGGILWGFSGVCGQYLFTQKGVSADWLVPYRLGLAGLAMVAYYIARSP 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+ + +L+++ L + + + + + + P + + +
Sbjct: 63 RLAFAPLKDRAL-LPQLLIYAFFGLMMTQYSYFCGVELSNAAVATVIQYSAPALILAVVC 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIP 189
+ +++IA + +L ++++ H L + ++
Sbjct: 122 FLERRVPKKVELIALIFAVLGVMLLATHGDLGSLVISAEALVWCLISALGVVIYSLVPTK 181
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + + L F +
Sbjct: 182 LNQKYPVALNLGWGMVIGGGVLALYTRVWQLGGVSDADGFAALVAVVILGTICAFSFYMT 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G+K S ++ P+ + F L + F +++ + +
Sbjct: 242 GLKIIGASRASMIACIEPVSAAAFAYFWLGTEFVFLDFAGFTLIISCIFLLAKDRKKA 299
>gi|238853288|ref|ZP_04643672.1| permease of the drug/metabolite transporter [Lactobacillus gasseri
202-4]
gi|238834082|gb|EEQ26335.1| permease of the drug/metabolite transporter [Lactobacillus gasseri
202-4]
Length = 309
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 100/307 (32%), Gaps = 16/307 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 6 TRSRLWTVLAALAAVMWGISGLFAESLFKISSKITPIWLTQVRLIISGIVLLIIATIL-- 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + ++ + L F+ + + + F+ P + +
Sbjct: 64 HQKPISVLKDKKNTLHIIAYGVFGLLPVQIFYFIVIEMANASIATILQFIGPFFVLAYLA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTI 188
+ ++ L L I+AAL+ + + +++ H + ++ A
Sbjct: 124 LTHQQVLRRLDILAALMAFIGVFLLSTHGNLNHLTITPVALFFGLLSALGEASYTLIPVK 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V + + L V+++ L F I +
Sbjct: 184 IVKRISSLVLTGWGMIFAGLGLVIFHPSFPAVPN--TPKVWLWVGAIIILGTIVPFQIMA 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K STV +++ PL V SV I + + + +V+ A++
Sbjct: 242 NALRYVKPSTVSLLDAFEPLSATVGSVLIFGLVMSGMDWLGTFLVIGAVLALNFTPKRKI 301
Query: 309 GKNKTKK 315
K K+
Sbjct: 302 KKTSEKR 308
>gi|124485792|ref|YP_001030408.1| hypothetical protein Mlab_0971 [Methanocorpusculum labreanum Z]
gi|124363333|gb|ABN07141.1| protein of unknown function DUF6, transmembrane [Methanocorpusculum
labreanum Z]
Length = 296
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 92/290 (31%), Gaps = 10/290 (3%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A +++G + F+ ++ E++ R + + V K
Sbjct: 9 ILALLIFGSNGIVASFIA-LTSYEIVFFRTMIGALFLILLFVGIRK----KPQFPAYRKE 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+V S + + W F A + S +Y+ PV+ + + +E+L+ I
Sbjct: 64 TLFVVISGVAMGICWMFLYEAYAQVGVSIASLAYYCGPVLVMIAAPIIFREKLHLSIIAG 123
Query: 151 ALLIILSLLI-----MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++L +L + L I G M L
Sbjct: 124 FAAVLLGMLFVNGGDLLTGGMSFGLFCGIMSAVMYAVMLIFNKKAVHINGLENPMIQLTS 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ V+ G F + L + F ++ I + TV I+ Y
Sbjct: 184 SFITVAVFTLAYQGLSFQIPAGSILPLLFLGVVNTGFGCYLYFSAIGNLSVQTVAIVGYL 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
PL +V S IL + + ++ I +++ + + + K K+
Sbjct: 244 EPLSALVFSAVILSEHLGFIQVIGAALILGGAMFGEMFSHKKLPWKKEKE 293
>gi|150395867|ref|YP_001326334.1| hypothetical protein Smed_0643 [Sinorhizobium medicae WSM419]
gi|150027382|gb|ABR59499.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 312
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 100/304 (32%), Gaps = 15/304 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M G + + +++ + ++ ++ +R +++ + +
Sbjct: 7 SPMKGMVLKVLSVVVFVCMSTSIKAAGNDIATGQITFYRSAFAMVPILGFLACRGALRDA 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + V V + + Y L+ + P+++V ++FL
Sbjct: 67 FRTS-----NVTGHVARGFVGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFLG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + A L+ ++ + I+ G A+AV +SA A + V
Sbjct: 122 EIVRLYRWSAVLIGLIGVFIIIWPRLTLFNQGGFGSAEAMGAVAVLFSAALGATAMVLVR 181
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ +L +++ + + + L+ G + +
Sbjct: 182 KLVQKERTHTIVLYFSLSAAMFSLATLPFGWSELSWEAFFLLMIAGFCGGIGQILLTESY 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ A +ST+ EYT+ +L IV F+ IVV A + + +
Sbjct: 242 RHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHQLGLER 301
Query: 312 KTKK 315
+ +
Sbjct: 302 RGAR 305
>gi|293368762|ref|ZP_06615366.1| putative membrane protein [Bacteroides ovatus SD CMC 3f]
gi|292636067|gb|EFF54555.1| putative membrane protein [Bacteroides ovatus SD CMC 3f]
Length = 331
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 97/304 (31%), Gaps = 15/304 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIV 72
K G ++ A +G+ PL+ + +SV V+ +R ++ + +
Sbjct: 5 KKSKTMTNKTKGFIYGAIAAASYGMNPLFALPLYAAGMSVDTVLFYRYFFATIVLGILMK 64
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+L K + + + + + + S FV PV+
Sbjct: 65 MQHQSFALHKADVLPLVIM------GLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVA 118
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFAR 185
+ +F KE+++ + + + LL + + ++ G + L +++++ Y
Sbjct: 119 VIMGIFFKEKISAITVFSILLALSGIALLYQGDGNKPLSTLGIIFVLLSSLSYAIYIVGV 178
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + + Y+V F L L +
Sbjct: 179 NRSTLKNLPTTKLTFYAILFGLSVYIVRLNFCTELQVIPSAWLWADVLSLAILPTAVSLV 238
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ I + I+ P+ + V + + + + +++ A+ + ++
Sbjct: 239 CTALAIHYIGSTPTAILGALEPVTALFFGVLLFHEKLTPRLMMGILMIITAVTLIIIGKS 298
Query: 306 INSG 309
+
Sbjct: 299 LIKK 302
>gi|289626554|ref|ZP_06459508.1| hypothetical protein PsyrpaN_15657 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650146|ref|ZP_06481489.1| hypothetical protein Psyrpa2_20737 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298486670|ref|ZP_07004727.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298158753|gb|EFH99816.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330867658|gb|EGH02367.1| hypothetical protein PSYAE_10474 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 79/288 (27%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLS 79
+ G F+ A L+ +++L + ++ R L + + +G
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYLVHTLLMACIFMPSAGLRV 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + ++L FI + + L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATAVNFLAPL------LVTALSVPLL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ Q +A ++ + ++I+ G + SA CFA + F
Sbjct: 126 HERVTRGQWVAVVVGFIGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSP 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + + + + FL+ G + + + A + +
Sbjct: 186 TTSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAML 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 246 APFSYCQIVFAGLLGFVVFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|134103123|ref|YP_001108784.1| hypothetical protein SACE_6693 [Saccharopolyspora erythraea NRRL
2338]
gi|291003934|ref|ZP_06561907.1| hypothetical protein SeryN2_05392 [Saccharopolyspora erythraea NRRL
2338]
gi|133915746|emb|CAM05859.1| hypothetical protein SACE_6693 [Saccharopolyspora erythraea NRRL
2338]
Length = 323
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 77/271 (28%), Gaps = 19/271 (7%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+LWG + L + LE +S +V R++ + L + G
Sbjct: 14 ALLWGSSFLLIKVALEALSPTQVALTRIVLGALVLVALCAVRGIRLRGSAALWRRIATAG 73
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + + G T LT TP+ + G + +E ++
Sbjct: 74 LFASALPWVLFGVGE-----QTVASGLTGVINATTPLWTALFGMLLARETPPKSRLAGLG 128
Query: 153 LIILSLLIMT--LHSGIPLLSLAIAVTWSAYCFARKTIPVGS-----------SEGFFIE 199
+ ++++ G L +A +A + + +G +
Sbjct: 129 VGFAGVVLIFAPWQGGDLLTPGVLACLGAAASYGVGYVYIGRKLTGESLREHGLSPLALA 188
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A F + G + + L F + I +T
Sbjct: 189 AMQMIAAAGFAAIALPIDGLRPVHPEPLALLSLAVLGVLGTGIAFAMNYRLIADEGATTA 248
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ Y P++ ++ +L + +
Sbjct: 249 SSVAYLMPIVSVLLGWLVLDEQLGARVLTGM 279
>gi|323694829|ref|ZP_08108984.1| integral membrane protein domain-containing protein [Clostridium
symbiosum WAL-14673]
gi|323501145|gb|EGB17052.1| integral membrane protein domain-containing protein [Clostridium
symbiosum WAL-14673]
Length = 298
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 19/305 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T+ G L F ++WG T + T+ L S +E++ R + + +
Sbjct: 1 MKNKTLTGHLAAFITILIWGTTFISTKVLLRSFSPIEILFIRFVIGYLAL------WCAC 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + + +L + + I T + +F
Sbjct: 55 PKSFKPADRKQEGYFVLAGLLGVTLYYLFENIALTYTLASNVGVIISIAPFFTVIFTCVF 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFARK 186
+ R L+ + + +++ SG L + ++S
Sbjct: 115 LREGRPGARFFCGFLIAMAGIFLISFDSGQTLKLNPMGDILAVIAAVLWASYSTLMKKIT 174
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + I + + W GF FL + + ++ F
Sbjct: 175 GFGYNTVQVTRRIFFYGIILMVPALFWMGFDVKLDQFLEPVMLMNLIFLGLGASALCFAT 234
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++Y +K I Y P++ V+S IL + + + ++ + +
Sbjct: 235 WNYAVKILGSVKTIIYIYMVPVITAVTSALILHEKMTKAMICGIFLTLLGLFL-SEDRRK 293
Query: 307 NSGKN 311
KN
Sbjct: 294 KERKN 298
>gi|299069054|emb|CBJ40305.1| putative tonb box harboring transmembrane protein, multidrug
resistance efflux transporter domain [Ralstonia
solanacearum CMR15]
Length = 300
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 82/288 (28%), Gaps = 9/288 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L + A + G T + ++ + + + R ++LP +F ++
Sbjct: 2 SNRTIGYLLLSLAMMTVGSTVIASKLIAGNLPPFPATALRFAFALPFLFALVLLRGQRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +++ + + I L P +S + L
Sbjct: 62 RLSG----RAWGLLVLQAGAGSVGYTTLLISGLSYLPAADAGVVIGTLPAVSALFSVIVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTL----HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
ER +++ LL + ++ + + + + + F +
Sbjct: 118 GERPKLRLMVSVLLATIGVMAVAWTDSGSASLTGVLFILGAVVCESAFILLNKRMPVPLP 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + L + + + F ++ G R
Sbjct: 178 PLLQATAMTALGLLVSLPFAVLEFPATMPSTAALAAVVWYALVPTVGGFLLWYAGAARVS 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S APL + + L + I + V++A++ L
Sbjct: 238 GSEAATFTAVAPLTAVALAALFLNERIGATQAFGVVAVILAILTLTLS 285
>gi|28209919|ref|NP_780863.1| transporter [Clostridium tetani E88]
gi|28202354|gb|AAO34800.1| transporter [Clostridium tetani E88]
Length = 312
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 76/284 (26%), Gaps = 13/284 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + + I+WG + T+ L+ +S + + R S +
Sbjct: 16 KKQNLWADISLLIVAIIWGSGFVATKNALDSISPFFITTLRFSISTLAIGIIFF------ 69
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + L + LL +F V+ F
Sbjct: 70 --KRIKNIDISHLKAGFIIGFFLFSAFSTQTIGLLYTTASKQAFLTGTNVVMVPFFYWFI 127
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSE 194
KE+ N I A L ++ + ++TL + + + + A +
Sbjct: 128 SKEKPNLYNITATFLCLIGISLLTLDGSMHINKGDLLTLICAIFFACHVVATGYFTKKYD 187
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + G + F I + +
Sbjct: 188 PIILTFTQFFVTTILSFLSMIILEGVPSAIPKEGIFPVFYLGIFSTFIAFLIQTIAQRYT 247
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S I+ + + S +L I ++ +A++
Sbjct: 248 SPSHTAIVLCLESVFGTILSCILLGDKFTYKIFIGCVLIFLAII 291
>gi|253581456|ref|ZP_04858681.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251836526|gb|EES65061.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 290
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 98/278 (35%), Gaps = 14/278 (5%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A +++G ++ + +E S E+ R + + + +S
Sbjct: 8 ISAMLIFGTIGIFVKNIELASS-EIALLRGIIGGIVLIIVSILVKNKISFKDI----KSN 62
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S + ++W F A + SY+ PV + L V LKE+L +I
Sbjct: 63 LLLLLLSGGAIGLNWIFLFQAYKYTTISNATLSYYFAPVFVMLLSPVILKEKLTAKKIFC 122
Query: 151 ALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +L ++ + +S + + + + +
Sbjct: 123 VVCAMLGMICIVGNSNGGAEGRNDFLGIVYGLTAAAFYASVILMNKFLKNLKSLETTYIQ 182
Query: 203 LAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + A+ + + G F + LI + + ++ +K K T+ +
Sbjct: 183 LILAAVVLMPYVFTVEGFNIFRIPASSIPYILILGMVHTGLAYLLYFSSLKELKGQTIAV 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P+ ++ S L++ + ++ +++ + V
Sbjct: 243 LSYIDPISAVIISAIFLREKMGLLQIAGGILILGSTFV 280
>gi|238923457|ref|YP_002936973.1| hypothetical protein EUBREC_1077 [Eubacterium rectale ATCC 33656]
gi|238875132|gb|ACR74839.1| Hypothetical protein EUBREC_1077 [Eubacterium rectale ATCC 33656]
Length = 287
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/280 (10%), Positives = 85/280 (30%), Gaps = 7/280 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +++ A + + + + + ++ R + + G +
Sbjct: 2 NDKKQGIIYIIMAGFFFALMTFFVRMSGDLPTMQKAFFRNAVAAVAAVILLAKSDEGFKI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
KD+ K + YA+ + ++P ++ + LK
Sbjct: 62 KKDSWKGLFLRSFFGTTGL------ICNFYAVDHLAIADANILNKLSPFFAIIMSYFVLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+ N + + + + + + S + + I V T +
Sbjct: 116 EKANKTEWLCVVTAFIGAVFVVKPSMNVQFFNAMIGVIGGFGAGVAYTFVRKLGKQGERG 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ ++F + ++ + L+ G + + +A +
Sbjct: 176 PVIVMCFSVFSCIVTAPFLLVGAKPMSVYQIVMLLLAGAAATGGQLSITKAYTKAPAKEI 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +Y+ + + L+Q D + I + I++ + +
Sbjct: 236 SVFDYSQVIFAALLGFVFLQQIPDYLSVIGYVIIIGSAIF 275
>gi|226953910|ref|ZP_03824374.1| membrane protein [Acinetobacter sp. ATCC 27244]
gi|226835393|gb|EEH67776.1| membrane protein [Acinetobacter sp. ATCC 27244]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 102/289 (35%), Gaps = 8/289 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++ + + L+ + + +F + ++ R L L I
Sbjct: 1 MPIVSQRHPVVLAIACLTFSAFLFSLMGICIRFASHTIDNYTIVFFRNLVGLILFLPFIY 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + M + + I F YA+ + + +P+
Sbjct: 61 RQG-------TDFVKTEKIWMHTWRSIIGLAAMYGFFYAIAHLELSNAMVFTYSSPIFIP 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F+ +FLKER++ L + AA L + + + L L+I S+ C A + V +
Sbjct: 114 FIAWLFLKERISTLMLCAAALGFIGVFFVAKPDQGLLNWLSIIGITSSLCAAMAFVTVRA 173
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + +G + + + FLI G+L + S+ +
Sbjct: 174 LTQTEPPERIVFYFCFIGALLSGIPMFWVWRPYQLEELFFLIAAGVLANVSQLFMSHAYR 233
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
A + + Y A + + + + DT I FG ++IA+ +
Sbjct: 234 LAPAGQIAPINYVAIIFAGIWGFLLWHELPDTYSLIGFGFILIAIFLCS 282
>gi|294626218|ref|ZP_06704823.1| drug/metabolite transporter superfamily protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292599483|gb|EFF43615.1| drug/metabolite transporter superfamily protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
Length = 291
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 96/292 (32%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L F Y + I+ + + LE + + VL+ + V F
Sbjct: 2 LKGVLLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPDDQLR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L +FLKE +
Sbjct: 58 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEV 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 118 HWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVITLRMAGHSEKRLTLY 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+V G F + L GYGLL Y + A +S V +
Sbjct: 178 GAGVTGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 289
>gi|190890825|ref|YP_001977367.1| hypothetical protein RHECIAT_CH0001208 [Rhizobium etli CIAT 652]
gi|190696104|gb|ACE90189.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 300
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 88/288 (30%), Gaps = 6/288 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ S G V + ++W L+ + + + V +++ R +S + ++
Sbjct: 12 SLSQERRTGIYLVIASALMWSTAGLFVR-MADMDVWSMVAWRSAFSFVTLGAFLIVQRR- 69
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + V ++ + A +I +L Y P I+ + +
Sbjct: 70 ---VGRRSRLGSYGMPGVTASAVSAFAAITYIASLQWTTVATVMTVYATLPFIATGIAFL 126
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L++R+ + + A + + I + L I ++ I +
Sbjct: 127 WLRDRVTYRFVAAGSAAFVGVAISVGAAVSARDVLGILCAFAMTAGCATQIVIARRFPDM 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ A AL + L + + G +R
Sbjct: 187 DTTMMTAFAALACLCIALPLMHFRILTPQQFLACALY-GVFTTGIGYILLLLGSRRVGSG 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
G++ +L V + I + +V++A++ YL
Sbjct: 246 EAGLLSMLDVVLGPVWVWLFYDEQISLPVLVGGAVVLLAVLWYLASDR 293
>gi|189468486|ref|ZP_03017271.1| hypothetical protein BACINT_04889 [Bacteroides intestinalis DSM
17393]
gi|189436750|gb|EDV05735.1| hypothetical protein BACINT_04889 [Bacteroides intestinalis DSM
17393]
Length = 293
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 88/293 (30%), Gaps = 5/293 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G ++ + +G+ P +T L S EV+++R + + V
Sbjct: 1 MSNIKGYIYAAASSSTFGLAPFFTISLLASGFSSFEVLAYRWGIASLTLGIFGVLLRETF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +L + ++ V I + + +I F
Sbjct: 61 RISRKDWGTVFILSLLRAATSLSLVIAYQHIASGVASTIHFMYPLAVALAMIFFFREKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG---SSEG 195
L +A ++ S I +A ++ Y +
Sbjct: 121 FSILFAVLVSLAGAALLSSGEIDFKGGNTTTGLIAATLSVFFYGGYIVGVRKSRAIHIPS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V+ + ALF+++ +GG G L + IK
Sbjct: 181 TALTCYVMGLGALFFIIGGSLTGGIQLATGGQTWLNILGLALPATAISNITLVKAIKYIG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I PL + + K+ + ++++A+ V ++ S
Sbjct: 241 PTLTSIFGALEPLTAVAIGCLVFKESFTPGTGLGILLILMAVTVVIMHEKKTS 293
>gi|313159354|gb|EFR58718.1| putative membrane protein [Alistipes sp. HGB5]
Length = 303
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 95/291 (32%), Gaps = 14/291 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + A +G+ PL+T L + V V+ +R L + + ++
Sbjct: 1 MANAKSRGCVLGAVAAASYGLNPLFTLPLYEAGMGVDSVLFYRYLLAAAMLGALMLVRRQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++ + L + + + F + + S F+ PV+ + +
Sbjct: 61 SFAVRRRDLVPLAVM------GLLFSFSSLFLFESYNHMDAGIASTILFLYPVLVAVIMA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V E+++ + +++ LL + ++ G PL L +A+ + + I +
Sbjct: 115 VGFHEKVSRITMLSILLAFTGIAMLYKGGGEPLSFLGVALVFLSSLCYAVYIVGVNRSSL 174
Query: 197 F------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ L YVV F + +
Sbjct: 175 RGLPTEKLTFYALLFGLSVYVVRLRFCADLQAIPTPGLWINAVSLALFPTIVSLVTMAAA 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + I+ PL + V + + + + ++++A+ + +
Sbjct: 235 IRAIGSTPTAILGALEPLTALFFGVVVFGERLTPRIVLGVVLILVAVTLII 285
>gi|295109602|emb|CBL23555.1| Predicted permease, DMT superfamily [Ruminococcus obeum A2-162]
Length = 318
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 83/298 (27%), Gaps = 10/298 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVY-----FSGGLSL 80
F A ILWG ++ + L + ++ R + S+ + I L
Sbjct: 7 FFPVSAGILWGSVGIFIRSLSGYGMDTATIVGSRTMISVILMLIGIAVIDRNQLKIRLRD 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + + V AV++ A + +
Sbjct: 67 LWIFVLASWLGMLGVNLTYNEAVNYVHLSLAAVLLSLSPVYVLILARVFFKEKITIRKAG 126
Query: 141 ER---LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + + LL L + ++ + ++ + + S
Sbjct: 127 CAALAIFGCSLASGLLESLGGMKLSGYGIFLGVASGVFYAMYSMFTKIAMKRGYSGLTIT 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+ L G ++ + ++ G +
Sbjct: 187 FYCMVVIAVTLIPFTDWKILGAYFTEAPAHGVIFMVLHAICGAVLPYTFYTIGFQYMDAG 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V I+ P+ +V +F + + + VIA+V+ +P + S K K K+
Sbjct: 247 KVSILAAGEPVAAMVFGIFCFGEIPTAIEFAGLFLTVIAIVLLGMPEKVRSNKTKPKE 304
>gi|228928421|ref|ZP_04091462.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228831468|gb|EEM77064.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSIPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + + + I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLSSNFFIGGILIICSVLITTFEK 293
>gi|83816234|ref|YP_445794.1| hypothetical protein SRU_1674 [Salinibacter ruber DSM 13855]
gi|83757628|gb|ABC45741.1| Integral membrane protein DUF6 [Salinibacter ruber DSM 13855]
Length = 314
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/269 (11%), Positives = 79/269 (29%), Gaps = 14/269 (5%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+ + P+ ++ V L + R + + + + + + V
Sbjct: 14 LGVLSFAFAPILVRWAGDVPGLAIAVWRTVTAAAVLIPVAAA----RTAPELRRLTRRDV 69
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ + L +H+ +I +L S +P+I LG +FL ERL ++A
Sbjct: 70 MLTGAAGVFLGLHFIAWIESLYHTTVASASVLVTTSPIILAALGYLFLGERLRRGTVLAI 129
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSA----------YCFARKTIPVGSSEGFFIEMC 201
+ + ++ + A+ +A +
Sbjct: 130 GIAVGGAGLIGWADAGTVALGQGALLGNALALSGALLVSVYLLIGRVVRQKVSWLAYVTP 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A+ AL + G + F+Y ++R + VG+
Sbjct: 190 LYAVAALTALAAAVLRGVPLTGYSWSFYAVCAGLALGPQVLGHGSFNYALQRVPAALVGM 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ P+ + + + + +
Sbjct: 250 LALLEPVGASLLAYGLFGEVPPPASIVGM 278
>gi|18309740|ref|NP_561674.1| hypothetical protein CPE0758 [Clostridium perfringens str. 13]
gi|18144418|dbj|BAB80464.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 308
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 95/304 (31%), Gaps = 10/304 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + + I +G LE + + + R SLP + I+ L
Sbjct: 2 KLKGIILTMLSSITFGFAFTLGPMTYGLEGSNPVTLTFLRNFLSLPFLLVIILLLKIDLR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K L++ +G + + T L ++ F + ++ FVT +F
Sbjct: 62 VTKKQLRDLIILGFVGNAITTLMLNMAFAYIDVGIVTPIHFTYPIFVTLGCVIFFHEKLS 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+++ L I + + + + S L + + ++ F I G E
Sbjct: 122 KQKVFALIIAMSGIGCFFITALNSASFGKSTLLGLILAIASGMFYAFYIIFMDKSGLKSE 181
Query: 200 MCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + L L I L + GIK
Sbjct: 182 PPFKITFYVAIASTIGMLIYGMLTKELALSSLTPKAWGLSAIFAFLCTVVALSLLQVGIK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S ++ P+ ++ +L + I ++ I ++ +++ K
Sbjct: 242 YIGASEAAVISTFEPITSVIFGAILLGEEITVMKIIACSLIFAGVLILSFAKEKTKSNIK 301
Query: 313 TKKS 316
K+S
Sbjct: 302 IKES 305
>gi|325183094|emb|CCA17551.1| Drug/Metabolite Transporter (DMT) Superfamily putat [Albugo
laibachii Nc14]
Length = 841
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/303 (11%), Positives = 77/303 (25%), Gaps = 30/303 (9%)
Query: 27 TLFVFCAYILWGIT--PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+V L+ ++ Q L V L + R+ + +
Sbjct: 449 IGYVILTTALFSVSSQGAVFQLLVGVPPLIRLFWRLFGASVAFLPLFIVTIREKRQSLSF 508
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+N + A + F+ +L ++ V + ++
Sbjct: 509 DQNVWKPLLACMVA--YLIQSSAFLTSLSMTSIGHVYIFCNCHSLLIVAGKLLVFQQLPK 566
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLA------------IAVTWSAYCFARKTIPVGS 192
L++I A L ++I TL G + A Y +
Sbjct: 567 LLELIGAALGFAGIIITTLDHGQGIDPGRESSVSGDLVAIAGACAAVVYLMSASKTRGSM 626
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF-------- 244
G FI + V L V + + +G ++
Sbjct: 627 DIGIFIFLLVTTGWLLLVPVLALLANTTEMYQSVSIWDSREGLFGWVHHLSIEFYIVIIG 686
Query: 245 -----CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI-LKQPIDTVRTIVFGIVVIAMV 298
F +K + + P++ + + L + I++I
Sbjct: 687 SFAGTMGFILSMKYFDPLAISVTMLLQPIVATSIGIVMGLTDVPGLFTLVGGSIMIIGCG 746
Query: 299 VYL 301
+ +
Sbjct: 747 LVI 749
>gi|110800503|ref|YP_695203.1| hypothetical protein CPF_0752 [Clostridium perfringens ATCC 13124]
gi|168209869|ref|ZP_02635494.1| putative membrane protein [Clostridium perfringens B str. ATCC
3626]
gi|168214351|ref|ZP_02639976.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
gi|110675150|gb|ABG84137.1| putative membrane protein [Clostridium perfringens ATCC 13124]
gi|170711973|gb|EDT24155.1| putative membrane protein [Clostridium perfringens B str. ATCC
3626]
gi|170714185|gb|EDT26367.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
Length = 308
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 10/304 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + + I +G LE + + + R SLP + I+ L
Sbjct: 2 KLKGIILTMLSSITFGFAFTLGPMTYGLEGSNPVTLTFLRNFLSLPFLLVIILLLKIDLR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K L++ +G + + T L ++ F + ++ FVT +F
Sbjct: 62 VTKKQLRDLIILGFVGNAITTLMLNMAFACIDVGIVTPIHFTYPIFVTLGCVIFFHEKLS 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+++ L I + + + + S L + + ++ F I G E
Sbjct: 122 KQKVFALIIAMSGIGCFFITALNSASFGKSTLLGLILAVASGMFYAFYIIFMDKSGLKSE 181
Query: 200 MCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L + L I L + GIK
Sbjct: 182 PPFKITFYVAIASTVGMFIYGMLTKELVLSSLTHKAWGLSAIFAFLCTVVALSLLQVGIK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S ++ P+ ++ +L + I ++ I ++ +++ + K
Sbjct: 242 YIGASEAAVISTFEPITSVIFGAILLGEEITLMKIIACSLIFAGVLILSFAKEKSKSNIK 301
Query: 313 TKKS 316
K+S
Sbjct: 302 IKES 305
>gi|196043117|ref|ZP_03110356.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|196026601|gb|EDX65269.1| transporter, EamA family [Bacillus cereus 03BB108]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSVYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWEFQSNPIEHMNMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + F+L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWFLLNETLSSNFFIGGILIICSIFITTFEK 293
>gi|17547226|ref|NP_520628.1| hypothetical protein RSc2507 [Ralstonia solanacearum GMI1000]
gi|17429528|emb|CAD16214.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 310
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 78/280 (27%), Gaps = 14/280 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ LWG + L+ + + +I+ RV + + + G P
Sbjct: 9 LLILAALWGGSFLFMRVAAPPFGPVALIALRVAIASAFLLPVLAMRGG------LGALRP 62
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+L AV + YA LT TS P+ + + +L ER++ ++
Sbjct: 63 HWPHLLAVGVLNSAVPFCLLAYAELTLTAGFTSVLNAAAPLFAAIVAFAWLGERMSAWRV 122
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS-------EGFFIEMC 201
+ + + ++++ S +A GS
Sbjct: 123 LGLAIGFVGVIVLVGGSSALDARQGGLAVAAALGATVLYGLAGSYAKRYLTGVPPLAVAT 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
I A + + + +F I +
Sbjct: 183 GSQIAAAVVLAPLAVWLWPAHTPTGSVWLHVIGLGIACTGIAYILFFRLIAHVGPTRAVS 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + P+ ++ + L + + ++++ +
Sbjct: 243 VTFLVPVFGVLWGILFLGEQLTLNMVAGCAVILLGTSLST 282
>gi|219666339|ref|YP_002456774.1| hypothetical protein Dhaf_0270 [Desulfitobacterium hafniense DCB-2]
gi|219536599|gb|ACL18338.1| protein of unknown function DUF6 transmembrane [Desulfitobacterium
hafniense DCB-2]
Length = 293
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 89/274 (32%), Gaps = 10/274 (3%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ IL+G + + +S E++ R L + + + L N
Sbjct: 9 ITSLILFGFNGIVASHIS-LSSYEIVFTRTLIGSLFLVIVFGFSKQKMRFL----SNKSH 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
L S + W F A + + +Y+ PVI + L + KER+ + ++I
Sbjct: 64 FLYLSLSGVAMGASWMFLYEAYTQIGVSIATLAYYCGPVIVMILSPLLFKERMTNAKLIG 123
Query: 151 ALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L ++ +L ++ + + L + S G M L
Sbjct: 124 FLAVLTGMLCVSGQAMSEEKTLFGLMCGLLSAVMYAVMVVFNKKAVSITGLENSMWQLMA 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
++ G + + LI + + I + TV I Y
Sbjct: 184 SFATVFLFLGLKQDFSISIASGDWLPILILGIVNTGIGCYFYFSSIGHLPVQTVAICGYL 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
PL ++ S +L + + V+ + +++
Sbjct: 244 EPLSALLLSTVLLGERLSLVQALGALLILGGAAF 277
Score = 39.9 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 45/112 (40%)
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S + I I +LF V+ GFS + FL N L+L G+ +
Sbjct: 24 HISLSSYEIVFTRTLIGSLFLVIVFGFSKQKMRFLSNKSHFLYLSLSGVAMGASWMFLYE 83
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +S + Y P+++++ S + K+ + + I F V+ M+
Sbjct: 84 AYTQIGVSIATLAYYCGPVIVMILSPLLFKERMTNAKLIGFLAVLTGMLCVS 135
>gi|256787728|ref|ZP_05526159.1| integral membrane protein [Streptomyces lividans TK24]
gi|289771616|ref|ZP_06530994.1| integral membrane protein [Streptomyces lividans TK24]
gi|289701815|gb|EFD69244.1| integral membrane protein [Streptomyces lividans TK24]
Length = 318
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/270 (11%), Positives = 81/270 (30%), Gaps = 12/270 (4%)
Query: 37 WGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
W + + ++ L V ++ R + +L V G + + +G +V
Sbjct: 48 WSGSFVTSRALGDSVPPVQHAFWRWVVALAVVAPF-----GARRAWRQRALIRRHLGFVV 102
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
++ + + + + + L RL ++ +
Sbjct: 103 LASLLGVTVYNTLVNQAGVTTPAANMGMIMAASPVLMALCERAGGVRLGVRRVAGLGVAC 162
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE------GFFIEMCVLAIPALF 209
+L++ G + + + +A CF + + GF + L
Sbjct: 163 AGVLLLVGGDGAAFSAGDLWMIAAACCFGSYSALLRRRPEGLDGVGFLFTTFLAGTVLLL 222
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ F L ++ F ++ + S G + Y P+
Sbjct: 223 PAHGVSLAVQGGFHPTPGTVWPLLYVGVASSAVAFFAWNKAVSLIGPSRAGAVYYLQPVC 282
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + S +L +P + +++ +V+
Sbjct: 283 VALLSWTLLAEPTGWAQAGCMALILGGVVL 312
>gi|255579425|ref|XP_002530556.1| Protein pecM, putative [Ricinus communis]
gi|223529894|gb|EEF31824.1| Protein pecM, putative [Ricinus communis]
Length = 475
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/279 (8%), Positives = 82/279 (29%), Gaps = 12/279 (4%)
Query: 34 YILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG + + + + V + R++ + + Y + + G
Sbjct: 136 FFFWGTAMVAMKEVLPLTGPFFVAAFRLIPAGLILIAFAAYKDRPFPSGFNAWLSIFLFG 195
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
++ + + G + + S V + ++ G L +
Sbjct: 196 LVDATFFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGLVGAGGLVLGVVG 255
Query: 153 LIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
L++L + +++ L A + + + + S ++
Sbjct: 256 LLLLEVPALSIDQSNFSLWGSGEWWMLLAAQSMAVGTVMVRWVTKYSDPVMATGWHMVIG 315
Query: 205 ---IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + G L L ++ + +F Y + L+ +
Sbjct: 316 GLPLTVISILNHDPLFNGSLQELTVSDIAALLYTSIFGSAISYGVFFYSATKGSLTKLSS 375
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + P+ + L + ++ + ++A+ +
Sbjct: 376 LTFLTPMFASIFGFLYLGETFSPLQLFGAAVTLVAIYML 414
>gi|84501560|ref|ZP_00999732.1| membrane protein, putative [Oceanicola batsensis HTCC2597]
gi|84390181|gb|EAQ02740.1| membrane protein, putative [Oceanicola batsensis HTCC2597]
Length = 302
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 104/295 (35%), Gaps = 8/295 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYF 74
A+ + G L+ F A +L+ + +FL V E+ R L + AI
Sbjct: 2 SPAANYRPVEGILWTFGAGLLFVGVNVLVKFLGPVVPATEMAFLRYALGLVLLVPAI--- 58
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + G+ + AV + YA+ T + +++P+
Sbjct: 59 ----RQIMRLRLTGRQWGLFALRGALHAVGVALWFYAMATIPLADVTAMNYLSPIYVTIG 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++F+ E+L +IIA ++ ++ L++ + +A+ +A FA +
Sbjct: 115 AALFMGEKLAARRIIAVVVGLVGALVILRPGFREISEGHVAMMIAALVFAGSYLLAKHLT 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ V+ + +++ V + + L + + + G + A
Sbjct: 175 DATDPIAVITMLSVWVTVGLIPLAAPVWVTPTWFQIVMLFVTAAFATLGHYLMTLGFRAA 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + + + + V + +P+D + +++ A+ +
Sbjct: 235 PITVTQPVTFLQLVWAVALGVLLFDEPVDPFVILGGLMIIGAISFITWREAVAKK 289
>gi|313498338|gb|ADR59704.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 292
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 82/287 (28%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V A L+ ++FL + + ++ V ++ L
Sbjct: 11 NQPLRGIALVVVATFLFASHDALSKFLGGLYPIVMVVW-----ARYVVHTLLMAGIFLPK 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + A L F L + F+ PV+ L + LK
Sbjct: 66 SGLNVLRTRRPVLQTLRALSLLSTSLLFTTGLQYLPLAEATAVNFLAPVLVTALSAPLLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A ++ + +L++ G + SA F +
Sbjct: 126 ERVTVGQWVAVVMGFIGVLVVVHPGGAMFTPAILYPFGSALGFCFYQLLTRILAAHDSPT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + L ++ G + + + A + +
Sbjct: 186 TSNFYAGLCNTLAMSALVPFFWEVPRWDHALLMLALGGFGMTAHLLLTQAFRHAAPALLA 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + Q DT+ + ++ ++ +
Sbjct: 246 PFSYCQIVFAGLLGFVVYSQVPDTLSLVGISVICLSGLGAAWMQRRK 292
>gi|229179654|ref|ZP_04307005.1| Transporter, drug/metabolite exporter [Bacillus cereus 172560W]
gi|228603857|gb|EEK61327.1| Transporter, drug/metabolite exporter [Bacillus cereus 172560W]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTAHRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIGELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 DLMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|299133759|ref|ZP_07026953.1| protein of unknown function DUF6 transmembrane [Afipia sp. 1NLS2]
gi|298591595|gb|EFI51796.1| protein of unknown function DUF6 transmembrane [Afipia sp. 1NLS2]
Length = 311
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 100/295 (33%), Gaps = 15/295 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
S + +G +F A I+WGI +++L ++ L + ++S + ++
Sbjct: 18 STQPPHENRAVGYALLFVATIIWGINWPVSKWLLHELPPLTLRGLPGVFSSLILAGFVLA 77
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + L+ + + +L+ T+ PV +
Sbjct: 78 KGQSLRAPRGEWGKLILYAALMVGFWMGLMG-----LSLVHLPASETAILGATIPVWAAG 132
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFA 184
L L E+L+ L++IA + + ++++ I + + A+ ++
Sbjct: 133 LAWPMLGEQLSVLRVIAIAMAVGGVVLLIGGDSISVSWEKMPGIAYALIAALLFALGAVL 192
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
K P+ + ++ F + + LF + +
Sbjct: 193 AKRRPIALRPLPGAVWQIGLGCFPVALIGILFEHPHFGGMSTLGWALFGFSTIFQGAIGY 252
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++R ST + P++ +V+S L +P+ + + V + +
Sbjct: 253 ACWFAALERLPASTAAVGTLIVPVIGVVASAISLGEPLGIPQIGALLLTVTGVAI 307
Score = 41.8 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 41/140 (29%), Gaps = 1/140 (0%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+A + + + +L + + G+
Sbjct: 34 FVATIIWGINWPVSKWLLHELPPLTLRGLPGVFSSLILAGF-VLAKGQSLRAPRGEWGKL 92
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
++ L+ F + + S I+ T P+ + +L + + +R I +
Sbjct: 93 ILYAALMVGFWMGLMGLSLVHLPASETAILGATIPVWAAGLAWPMLGEQLSVLRVIAIAM 152
Query: 293 VVIAMVVYLLPTVINSGKNK 312
V +V+ + I+ K
Sbjct: 153 AVGGVVLLIGGDSISVSWEK 172
>gi|266622378|ref|ZP_06115313.1| integral membrane protein [Clostridium hathewayi DSM 13479]
gi|288865891|gb|EFC98189.1| integral membrane protein [Clostridium hathewayi DSM 13479]
Length = 311
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 96/307 (31%), Gaps = 20/307 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ P M G L +WG T + T+ L + LE++ R ++ A
Sbjct: 2 SEKPNMAGHLAAAVTIFIWGTTFISTKVLLVSFTPLEILFFRFFIGYAALWIAAPRLLHT 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K+ L + +++ +AL Q S V P + +
Sbjct: 62 KDIKKELL-------FAAAGLCGVTLYFLMENFALTLTQAANVSIIISVAPFFTSLFDWL 114
Query: 138 FLK-ERLNHLQIIAALLIILSLLIMTLHSGIPLL-----------SLAIAVTWSAYCFAR 185
F+K E+ + +L + +++ G + + +S
Sbjct: 115 FMKGEKPGRRFLTGFTAAMLGISLLSFQKGTGVQLSPKGDLLALAAAITWAAYSILTKKI 174
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ G+ E I + + + F F+ L ++ F
Sbjct: 175 GSYGYGTIESTRRTFFYGLIFMVPALFFLPFQIAPARFMVMQNALNILFLGFGASALCFV 234
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++ ++ + Y P++ +++S+ L + I + + +++
Sbjct: 235 TWNFAVRALGSVKTSVYIYAVPVITVITSLIFLHEVITWQSACGIVLTLAGLILSESRIT 294
Query: 306 INSGKNK 312
+ K
Sbjct: 295 LKQTARK 301
>gi|261417103|ref|YP_003250786.1| protein of unknown function DUF6 transmembrane [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373559|gb|ACX76304.1| protein of unknown function DUF6 transmembrane [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302325582|gb|ADL24783.1| putative membrane protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 297
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 89/299 (29%), Gaps = 16/299 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
LS + L ++ G + I +G PL L + S V+ +R + +F I
Sbjct: 3 LSSFVSRLSSLKGFALAAASAICYGTNPLGALHLYTQNYSPETVLFYRFFTAAILLFVVI 62
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + + A + AV + + L S F+ P+
Sbjct: 63 LAKGSHFKISFREFRALVA------FGFLFAVSSLTYYASFKYMDAGLASTLLFLYPLEV 116
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCF 183
L ++F KER+ I + + + + ++ G L+ L+
Sbjct: 117 SVLMAIFFKERIKAWTIASIAVSMAGVALLYRGGDGSTLSTVGCLLVFLSSISYAIYMVM 176
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
A + S + L SG F + +
Sbjct: 177 ANRINLQMGSVKMTFYAICFCLCFLLLYSVTLGSGLPPLFTQASSWGWGFMLGLVPTVLS 236
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+K + I+ P+ + V + + + T +++ + ++ +
Sbjct: 237 LIFMVKAVKIIGSTPTAILGALEPVTAVTIGVMVFGETLTTRIIAGIALILGSTMLVAV 295
>gi|229097833|ref|ZP_04228786.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-29]
gi|228685590|gb|EEL39515.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-29]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDYIPPLTLVWLRFIIAFVVLYGILKIA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQVASIGTVNTYVILGVLYLGVISTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|320532359|ref|ZP_08033204.1| integral membrane protein DUF6 [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320135430|gb|EFW27533.1| integral membrane protein DUF6 [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 315
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/308 (12%), Positives = 94/308 (30%), Gaps = 21/308 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T + V A LW + T+ L V L + + R L + + ++ L
Sbjct: 3 QDSTSLHISAVIGAAFLWSTSFAVTKVVLRDVGALTLGALRFLAAGILLITICLFVRVRL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +++ Y + PV+++ ++F
Sbjct: 63 RAPLRSHA-----VVAGAGLVGITIYFSLENYGVALATATDAVLIVASYPVMTMVAEAIF 117
Query: 139 LKERLNHLQIIAALLIILSL---------------LIMTLHSGIPLLSLAIAVTWSAYCF 183
+ + + AL+ + + + L+ SA
Sbjct: 118 HHRQPATINVAGALVAFAGVALVTANKPAQEVPYRPWGIIFLLLGGLAWTAYNMMSAQKQ 177
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
T + L F ++ G + L + L + ++
Sbjct: 178 VNVTSNRRLGVLITTGLQNLWGGIGFCLLVPILPEGVNTNLRSSAVWLIIYLAIGCSAVA 237
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F ++++G+ K S M P+ +V ++ I + I ++ I +++ + +
Sbjct: 238 FLLYTFGLTALKPSQAVAMLNLVPVFGVVWAIAIAGEHITPLKAIGAVTIIVGVAMNARN 297
Query: 304 TVINSGKN 311
++ K
Sbjct: 298 PQLSQEKQ 305
>gi|298369526|ref|ZP_06980843.1| RarD protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282083|gb|EFI23571.1| RarD protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 299
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 120/293 (40%), Gaps = 4/293 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV---LWSLPGVFFAIVYFSGGL 78
T G L + +L+ + LY+ +++ ++ +V + R+ L++L + + G L
Sbjct: 8 QTAKGVLAAVASNVLFAMLFLYSSWMKPMNGTDVFAWRMVGMLFALFALASLTHSWQGAL 67
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K+ K +++ ILA F+++ + +G + YF+ P+ + +G ++
Sbjct: 68 NFAAGIGKDWKRWLLVILPTPILASQLWLFVWSPVNGEGINVAMGYFLFPLAMMLVGRIW 127
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KERL Q +A L + +G + V + + +G +
Sbjct: 128 FKERLGGPQRLAVTLACAGVACQLWRNG-AFSWATVWVFGTYPLYYLLRRKLGVPSLIGL 186
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++ I V FS F++ G+ ++ + ++
Sbjct: 187 LIDLIIITPCMLVYIVFFSDSPGMIAAQPNLIAFIVLIGINSALAMYLNLQANNMLPMAV 246
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G++ Y P+L+ V +V L +P++ +G++ + + V + ++I K
Sbjct: 247 FGMLSYLEPILLFVIAVLWLDEPLENSALAGYGLIWLGLSVMIANSLIRMKKK 299
>gi|241203819|ref|YP_002974915.1| hypothetical protein Rleg_1081 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857709|gb|ACS55376.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 312
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 101/310 (32%), Gaps = 15/310 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ M G + +++ + + + +V R ++L + + Y
Sbjct: 1 MHSVLRNPMRGIALKVSSVVVFLAMQTFIKLAGSDIPPGQVTFCRSFFALFPIMAYLAYN 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + TI + F Y LL + P+++V
Sbjct: 61 RQLRAAFYTA-----NPIGHLKRGTIGILSMAFGFYGLLHLPLPEAIALGYALPLVAVIF 115
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFAR 185
+VFL E + + A L+ I+ + I++ + V +SA
Sbjct: 116 AAVFLGETVRIYRWSAVLVGIVGVAIVSWPKLTLFRDGGMEADQAVGALCVLFSAVLGGV 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I V ++ ++ V++ S + + P L+LI G
Sbjct: 176 AMIQVRRLVEEEKTATIVLYFSITASVFSLASLPFGWLILPWPTALYLIAAGFCGGVAQI 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A +ST+ EYT+ LL + + F+ I IVV A + +
Sbjct: 236 LLTESYRHADVSTIAPFEYTSILLGGIVAYFVFGDVPSVTMLIGTVIVVAAGIFIIYREH 295
Query: 306 INSGKNKTKK 315
+ + +
Sbjct: 296 QLGIEQREAR 305
>gi|256395456|ref|YP_003117020.1| hypothetical protein Caci_6325 [Catenulispora acidiphila DSM 44928]
gi|256361682|gb|ACU75179.1| protein of unknown function DUF6 transmembrane [Catenulispora
acidiphila DSM 44928]
Length = 329
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 91/296 (30%), Gaps = 11/296 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + A IL G ++ S V+ R ++ + + K+
Sbjct: 13 RKGAFELTFAMILSGTIGVFVVE-SGASPFNVVFFRCVFGAIALGSYCLA----RGYFKN 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K +G+ + +W + + + Y P V LG+V +++L
Sbjct: 68 HGFTAKKLGLTALGGVFIVFNWVLLFSSYTKTSISVATVVYHTQPFYVVLLGAVLFRDKL 127
Query: 144 NHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ ++ L+++ L L +A +A T+ G
Sbjct: 128 TASKVGWLVVAFTGLILVAGVSASDLSGDSTYLVGLGQALLAAVFYALSTVITKRVSGVR 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L L + F+ + + ++ + ++
Sbjct: 188 PHLIALVQVLLGIPLLLPFAAVGQTADLGARWGWLVGIGLIHTGVMYVLMYSAYQKLPTP 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ ++ + P + +V + + V+ + ++V A + L + +T
Sbjct: 248 KIAVLAFIYPAMAMVMDWLVFGHHVSVVQALGIPLIVTASLGVNLGWRFGPPRRRT 303
>gi|182624107|ref|ZP_02951894.1| putative membrane protein [Clostridium perfringens D str. JGS1721]
gi|177910723|gb|EDT73083.1| putative membrane protein [Clostridium perfringens D str. JGS1721]
Length = 308
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 10/304 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + + I +G LE + + + R SLP + I+ L
Sbjct: 2 KLKGIILTMLSSITFGFAFTLGPMTYGLEGSNPVTLTFLRNFLSLPFLLVIILLLKIDLR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K L++ +G + + T L ++ F + ++ FVT +F
Sbjct: 62 VTKKQLRDLIILGFVGNAITTLMLNMAFACIDVGIVTPIHFTYPIFVTLGCVIFFHERLS 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+++ L I + + + + S L + + ++ F I G E
Sbjct: 122 KQKVFALIIAMSGIGCFFITALNSASFGKSTLLGLILAVASGMFYAFYIIFMDKSGLKSE 181
Query: 200 MCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L + L I L + GIK
Sbjct: 182 PPFKITFYVAIASTVGMFIYGMLTKELVLSSLTHKAWGLSAIFAFLCTVVALSLLQVGIK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S ++ P+ ++ +L + I ++ I ++ +++ + K
Sbjct: 242 YIGASEAAVISTFEPITSVIFGAILLGEEITLMKIIACSLIFAGVLILSFAKEKSKSNIK 301
Query: 313 TKKS 316
K+S
Sbjct: 302 IKES 305
>gi|116249527|ref|YP_765365.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115254175|emb|CAK03783.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 305
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/290 (10%), Positives = 82/290 (28%), Gaps = 14/290 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++ + + W + + + L ++ +E+ + R + + +V +
Sbjct: 23 LVAFAAIVVTILSWASSFVVIRICLGPLTPIELATARYVAAGAIALVYLVIYRPMPE--- 79
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ V + +A + T SF PV + + + L ER
Sbjct: 80 ----KRDFFRLSVAAVLFIAAYAVLLNTGEQTVAAGPASFIINTMPVFTALIATFALGER 135
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
+ + + ++ + S A SA + +G
Sbjct: 136 FGRWGWVGTAVSFGGVALIAVASDGGFKLDPNAVLILGAALCSAIASVLQKPLLGRLPAL 195
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +L I ++ + + + + ++ +KR
Sbjct: 196 AVTAWILLIGSVPLFPAVPATIQALAAAPAEVNWGVAYLVIFPTAIGYLTWAIALKRLTA 255
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y P + + L + + + + ++ ++V L
Sbjct: 256 ARASNFLYGVPPVATLIGFVWLGETPTALGAVGGVMAILGVLVVNLMRKR 305
>gi|15839162|ref|NP_299850.1| hypothetical protein XF2573 [Xylella fastidiosa 9a5c]
gi|9107787|gb|AAF85370.1|AE004064_12 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 311
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 99/294 (33%), Gaps = 8/294 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + + + + +G+ + ++ Q+ E+ R + L + I+
Sbjct: 3 TQRQMPLRAAMLMLFSTLSFGMMAITIRYASTQIPTTEIAFFRNAFGLLVLLPLILGPGK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + + +A+ + TP+ + L +
Sbjct: 63 PLPRTQHGPRYIARSML-------GLISMLCNFWAISHLPLTQAITLSYSTPLFATILAA 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E + +++A L +L++ + +A A TI +
Sbjct: 116 LWLHEVVRLRRLLAILAGFAGILVLLQPWSSTFSPTLLVALAAAILNAVITIQMKQLSHL 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ F+V + + + ++LI G+ + ++ ++ ++
Sbjct: 176 DPPDTVVLYTYAFWVPLSLLLALWQWHWPAGVEWVWLIATGIFGTIGQLLWIRALRLGEV 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + + + L+ + ++ + +D + I++ A V + + +
Sbjct: 236 SALQPIGFMQLPLVTLLGWWLFGEYLDRYTALGASIIIGANVYITHREAVLARR 289
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 38/141 (26%)
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
M +PL + + + + +S A +V G
Sbjct: 1 MVTQRQMPLRAAMLMLFSTLSFGMMAITIRYASTQIPTTEIAFFRNAFGLLVLLPLILGP 60
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
L I +L + I L+ + Y+ PL + + L +
Sbjct: 61 GKPLPRTQHGPRYIARSMLGLISMLCNFWAISHLPLTQAITLSYSTPLFATILAALWLHE 120
Query: 281 PIDTVRTIVFGIVVIAMVVYL 301
+ R + ++V L
Sbjct: 121 VVRLRRLLAILAGFAGILVLL 141
>gi|127512625|ref|YP_001093822.1| hypothetical protein Shew_1696 [Shewanella loihica PV-4]
gi|126637920|gb|ABO23563.1| protein of unknown function DUF6, transmembrane [Shewanella loihica
PV-4]
Length = 298
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/295 (8%), Positives = 78/295 (26%), Gaps = 7/295 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A +WG+ + + ++ + R + + I L + K
Sbjct: 4 LMLLVAAAIWGLGFVAQRLGMDHLEPFAFNGLRFVIGALSLLPLIWVMQRKGRLKGVSDK 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++ A + + + + I + L +
Sbjct: 64 DILRRVLIGSLACGGILFIAASFQQVGLLHTTAANAGFITGLYIVLVPVLGLLLKHSTGT 123
Query: 147 Q-IIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + + L +++ + I + A +
Sbjct: 124 NTWVGCAVAAVGLYFLSVGDDFSISYGDGLQLIGAIFWAMHILAVDHFTNRVAPVVLACG 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ AL + + + + K A + I
Sbjct: 184 QFLVCALASFGVSLVLETTTVAGVQAAWAALAYSGLVSVGVAYTLQVLAQKHAHPAHAAI 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + + + L + + G++++ M++ LP + K++ +K+
Sbjct: 244 ILSLETVFAAIGGMMFLGESLSGRALFGCGLMLLGMLISQLP-LRYLVKSRHEKA 297
>gi|302524106|ref|ZP_07276448.1| predicted protein [Streptomyces sp. AA4]
gi|302433001|gb|EFL04817.1| predicted protein [Streptomyces sp. AA4]
Length = 312
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/271 (11%), Positives = 79/271 (29%), Gaps = 5/271 (1%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + + + LE S ++++ R++ + + L + T +
Sbjct: 24 ALMWGSSFFWIKLGLEAFSPVQLVLARLVLGAAVLLALCLIGRRSLPAQRSTWGHLLVAA 83
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ L G ++ +V + + +I
Sbjct: 84 FFHNALPFLLFAVGETTVDSGITGVLNSTTPLWVLVAAPFLGAANRMTATRIAGLVIGLA 143
Query: 153 ----LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ L G A A A+ + + + S + I + +
Sbjct: 144 GILLIFAPWQASGLLSWGALACLAAAASYGFAFVYEGRYLSNTGSSPYAIAAGQMLLATG 203
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F V+ F G L + +I F + + ++ Y P+
Sbjct: 204 FLVLAMPFGGLTPVHLSPVAMIAVVILGLGSTGIAFALNYQLLASEGAVAASVVGYLLPV 263
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ L + ++ +V++ + +
Sbjct: 264 VSVLLGAVFLHEQLNLRVIAGMVVVLLGVAL 294
>gi|238021405|ref|ZP_04601831.1| hypothetical protein GCWU000324_01305 [Kingella oralis ATCC 51147]
gi|237868385|gb|EEP69391.1| hypothetical protein GCWU000324_01305 [Kingella oralis ATCC 51147]
Length = 291
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 88/298 (29%), Gaps = 19/298 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++W + +F E + + ++ R+L + + L
Sbjct: 1 MFYQIAAMLIWSSAFIAAKFAETMLDPILLVQFRLLIVAIILLPIGIPMFRKLPKSA--- 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ S L + P++ VF+G F ++
Sbjct: 58 ----WKPLIWLSFLNYIAVLILQFKGLQYTSASSALTMLGLEPLLVVFIGHFFFDDKARR 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-----------FARKTIPVGSSE 194
I +L + + + L I++ A +
Sbjct: 114 YHWICGVLAFIGVFTLILGGQHAGKGGEISLLGCAMVLSGGIVFSAILRPTQKFMRQIPA 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + L + H + + +++ G+ R
Sbjct: 174 STYTTLSFIIAAPLCLPFTAVLTKSWHIAWSWQGILGMAYLSIGCSWLAYWLWNKGMDRV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ G++ P+ I+ +V +L++PI + + IV+ A V+ + I + K
Sbjct: 234 PANLTGLLITLEPVFGILMAVVLLREPISALSWLGIAIVISATVLASMMPRIYNRARK 291
>gi|116249404|ref|YP_765245.1| putative transmembrane transporter [Rhizobium leguminosarum bv.
viciae 3841]
gi|115254054|emb|CAK12451.1| putative transmembrane transporter [Rhizobium leguminosarum bv.
viciae 3841]
Length = 315
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 93/297 (31%), Gaps = 8/297 (2%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWS 63
A +E + NA M G + + +L+ + ++L +V +V+ R + +
Sbjct: 6 ARMREMTTKTGVANAGNLIMTGVVLMLLGDLLFALNDAMGKWLVASFAVGQVLVIRSVGA 65
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ I+ + ++ L A+
Sbjct: 66 FIVLGPMILRQGPMALFRVEQKGLQFIRVLMATCDVALF------YAAVAYLPLADVMTF 119
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF 183
Y P+ L FL E++ + +A L+ ++I S L ++ + F
Sbjct: 120 YMAGPIYIAALSHFFLGEKIGWRRWLAVLIGFAGVVIALRPSTAMLSLPSLFGLAGSLAF 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
A + V V S G I + L+ ++ +
Sbjct: 180 ALSLVMSRYLRSTSDTTLVTWQTIAALVTGIVLSIGHWQPATLIDWSGMLLLG-IVATCA 238
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + +K A S + ++YT L IV DT + I+V+A +
Sbjct: 239 HLLITRSLKLAPASLLAPLQYTLLLWAIVLGYLFFNDIPDTQIIVGAAIIVVAGLFI 295
>gi|239625517|ref|ZP_04668548.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519747|gb|EEQ59613.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 314
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 93/297 (31%), Gaps = 11/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+GT+ WG + QFL ++V +++ R+ ++ + +
Sbjct: 3 TQDRQTLGTMMALVGGTCWGFSGCCGQFLFEQKEVQAPWLVTVRLFFAGMILIMIGFRLN 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G L + AV +L+F+ + + A+ + +++PV+ + +
Sbjct: 63 G-RRNLDIFKRRRDAVHLLLFAVFGITFCQFTYFMAIQASNAGTATVLQYLSPVLILMVV 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ K L++ A L +L ++ H I + + A + G
Sbjct: 122 CIRGKRLPRGLELGAIGLSLLGTFVIGTHGDIHSFHITGEALFWGLLAAVSAMIYTMIPG 181
Query: 196 FFIEMCVLAIPALFYVVWNGF-------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I + F + G + + F ++
Sbjct: 182 GLILRYDIYQVLGFGMFIGGIVMGISVRPWTYQPVWDAGTAGALGGVIVVGTALAFGLYL 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
G+ +M P+ ++ SVF LK F +++ A+ V
Sbjct: 242 QGVSMIGPLKGSVMGSVEPISAVIISVFWLKTSFTPADFAGFALILGAVFVLTFAQR 298
>gi|311277381|ref|YP_003939612.1| carboxylate/amino acid/amine transporter [Enterobacter cloacae
SCF1]
gi|308746576|gb|ADO46328.1| carboxylate/amino acid/amine transporter [Enterobacter cloacae
SCF1]
Length = 301
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 102/299 (34%), Gaps = 12/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T G L V A +LWG + + Q++ Q+S + R+L++ + + F G
Sbjct: 2 SSTRKGMLNVLIAAVLWGSSGVCAQYIMAQSQMSSPFLTMVRLLFAGFILL--TLAFVHG 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + A +LVFS F+ + + F++P I V ++
Sbjct: 60 DKIFRILKNRKDAFSLLVFSLVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFAL 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
K R L A ++ ++ H + IA ++A + +
Sbjct: 120 VKKARPGPLVFAAIFTSLIGTFLLVTHGNPTSLSVSPAAVFWGIASAFAAAFYTTYPSTL 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ G + + +++ + F + F + S F ++ G
Sbjct: 180 IARYGTLTIVGWSMLLGGAFLLPFYADRSQTFVVNGSLVLAFFYLVVIGTSLTFSLYLKG 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + SV +L + +++ ++V+ L + +
Sbjct: 240 AQMIGGPKASILSCAEPLSSALLSVILLGVSFALPDWLGTLLILSSVVLISLDSRKRTK 298
>gi|262368544|ref|ZP_06061873.1| permease [Acinetobacter johnsonii SH046]
gi|262316222|gb|EEY97260.1| permease [Acinetobacter johnsonii SH046]
Length = 311
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/294 (18%), Positives = 111/294 (37%), Gaps = 5/294 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G A + +G+ YT FL+ + + + R+L +LP + + + L
Sbjct: 3 KGVALSVLASVTFGVLYFYTFFLKPLDSEQTFAWRMLSTLPFLTAFMWWSGDLKLISELF 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K K P L+FS+ + F++ + +G S YF+ P++ V +G + KE
Sbjct: 63 KRIFKQPWMFAWLLFSSVLCTTQLWLFLWGPMNGRGLQVSLGYFLLPLVMVLVGCILYKE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+L+ Q+ A L +L + G F + + G F
Sbjct: 123 KLSRWQMAAVALAVLGVGHEIWRIGSMAWETVYIALAYPLYFFLRRVCKTDHLGGFWWDL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P FY+ + + L++ + + G+
Sbjct: 183 FLILPVAFYLGFVHSDSLVLVQQFPHLILAVIGLG-FLSAMGLGSYILASRYLPFVIFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ Y P+L+ +SV + + I+T + + A+++ ++ V++ K + K
Sbjct: 242 LSYLEPVLLAGASVAM-GERIETGEWFTYIPIWFAVLLLIIEGVLHLYKQQQNK 294
>gi|260430995|ref|ZP_05784966.1| integral membrane protein DUF6 [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414823|gb|EEX08082.1| integral membrane protein DUF6 [Silicibacter lacuscaerulensis
ITI-1157]
Length = 314
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/301 (11%), Positives = 100/301 (33%), Gaps = 8/301 (2%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVF 68
+ ++ A + G ++F A + + G+T L + ++ R L +
Sbjct: 9 STGSMTAFAAQSRPLAGMFWMFTAGLSFVGMTALVKSLGTTMDPIQAAFLRYALGLVFLL 68
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
A + T + + + I AV + +A+ + ++TP
Sbjct: 69 PAA-------RAILTTRLTRRNLTLFSSRGAIHAVGVMLWFFAMTRIPLAEVTAMNYLTP 121
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
V ++FL E + +I A L+ I+ I+ + + +A+ ++ +
Sbjct: 122 VYVTLGAALFLGETMAFRRIAAVLVAIVGAAIILRPGFREVSAGHLAMLGTSLMLGGSYL 181
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ V+A +++ ++ + ++ D L + +
Sbjct: 182 LAKAMVRDVRPSVVVAHLSIWTTIFLIPFALAVWTPPSLRDIGVLFLIASFATAGHYFMT 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ A ++ + + + + + + +D +++ A+ + +
Sbjct: 242 LALQAAPVAVTQPVTFLQLIWATLLGALVFHEGVDIWVVAGGTLILGAVSFITWREAVLN 301
Query: 309 G 309
Sbjct: 302 R 302
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 40/160 (25%)
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ PL + T +
Sbjct: 1 MFPGGFGCSTGSMTAFAAQSRPLAGMFWMFTAGLSFVGMTALVKSLGTTMDPIQAAFLRY 60
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
AL V + + G +++ ++ + + R L+ V M Y
Sbjct: 61 ALGLVFLLPAARAILTTRLTRRNLTLFSSRGAIHAVGVMLWFFAMTRIPLAEVTAMNYLT 120
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P+ + + + L + + R + ++ + L P
Sbjct: 121 PVYVTLGAALFLGETMAFRRIAAVLVAIVGAAIILRPGFR 160
>gi|229051178|ref|ZP_04194718.1| Transporter, drug/metabolite exporter [Bacillus cereus AH676]
gi|228722172|gb|EEL73577.1| Transporter, drug/metabolite exporter [Bacillus cereus AH676]
Length = 294
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQAASIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELLDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGCILIICSVLITTFEK 293
>gi|168217420|ref|ZP_02643045.1| putative membrane protein [Clostridium perfringens NCTC 8239]
gi|182380535|gb|EDT78014.1| putative membrane protein [Clostridium perfringens NCTC 8239]
Length = 308
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 10/304 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + + I +G LE + + + R SLP + I+ L
Sbjct: 2 KLKGIILTMLSSITFGFAFTLGPMTYGLEGSNPVTLTFLRNFLSLPFLLVIILLLKIDLR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K L++ +G + + T L ++ F + ++ FVT +F
Sbjct: 62 VTKKQLRDLIILGFVGNAITTLMLNMAFACIDVGIVTPIHFTYPIFVTLGCVIFFHEKLS 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+++ L I + + + + S L + + ++ F I G E
Sbjct: 122 KQKVFALIIAMSGIGCFFITALNSASFGKSTLLGLILAVASGMFYAFYIIFMDKSGLKSE 181
Query: 200 MCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L + L I L + GIK
Sbjct: 182 PPFKITFYVAIASTVGMFIYGMLTKQLVLSSLTHKAWGLSAIFAFLCTVVALSLLQVGIK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S ++ P+ ++ +L + I ++ I ++ +++ + K
Sbjct: 242 YIGASEAAVISTFEPITSVIFGAILLGEEITLMKIIACSLIFAGVLILSFAKEKSKSNIK 301
Query: 313 TKKS 316
K+S
Sbjct: 302 IKES 305
>gi|167766102|ref|ZP_02438155.1| hypothetical protein CLOSS21_00595 [Clostridium sp. SS2/1]
gi|167712182|gb|EDS22761.1| hypothetical protein CLOSS21_00595 [Clostridium sp. SS2/1]
gi|291560049|emb|CBL38849.1| Predicted permease, DMT superfamily [butyrate-producing bacterium
SSC/2]
Length = 295
Score = 74.6 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 94/292 (32%), Gaps = 11/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ G F WG++ + ++L + ++ +++ R+L + + + Y G
Sbjct: 2 NRSLKGICFTVAGGCCWGMSGVMGKYLFDAKDLTATWLVTVRLLGAGICLLLLM-YQRKG 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
S+ + + AV L+F +A+ + A+ + + P++ + +
Sbjct: 61 NSIFRVWKRKDSAVNQLIFGMIGMAMCQMTYFLAIQESNPGTATVLQYSAPILIMVFFVL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPV 190
K +++ +I+ + ++ H L + ++ + + +
Sbjct: 121 VEKRFPKKEEVLVLATVIVGIFLLATHGSIKNLVITNAALFWGLLSAFAFAVYNVQPKKL 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G V + + + L F + +G
Sbjct: 181 LDEFGTLETTGWGMFVGGVLVTPFTKVWSIPGHWDIMTVAMTIGVVFLGTIVAFSCYLHG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I ++ PL+ + S +L Q + + +V A+ +
Sbjct: 241 ISMLGPVQGSMLGCVEPLVATILSATVLGQAFGMIDVVGILCIVGAVTALTV 292
>gi|168204533|ref|ZP_02630538.1| putative membrane protein [Clostridium perfringens E str. JGS1987]
gi|170663890|gb|EDT16573.1| putative membrane protein [Clostridium perfringens E str. JGS1987]
Length = 308
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 98/304 (32%), Gaps = 10/304 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + + I +G LE + + + R SLP + I+ L
Sbjct: 2 KLKGIILTMLSSITFGFAFTLGPMTYGLEGSNPVTLTFLRNFLSLPFLLVIILLLKIDLR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K L++ +G + + T L ++ F + ++ FVT +F
Sbjct: 62 VTKKQLRDLIILGFVGNAITTLMLNMAFACIDVGIVTPIHFTYPIFVTLGCVLFFHEKLS 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+++ L I + + + + S L + + ++ F I G E
Sbjct: 122 KQKVFALIIAMSGIGCFFITALNSASFGKSTLLGLILAVASGMFYAFYIIFMDKSGLKSE 181
Query: 200 MCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L + L I L + GIK
Sbjct: 182 PPFKITFYVAIASTVGMFIYGMLTKELVLSSLTHKAWGLSAIFAFLCTVVALSLLQVGIK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S ++ P+ ++ +L + I ++ I ++ +++ + K
Sbjct: 242 YIGASEAAVISTFEPITSVIFGAILLGEEITLMKIIACSLIFAGVLILSFAKEKSKSNIK 301
Query: 313 TKKS 316
K+S
Sbjct: 302 IKES 305
>gi|88801566|ref|ZP_01117094.1| hypothetical protein PI23P_02867 [Polaribacter irgensii 23-P]
gi|88782224|gb|EAR13401.1| hypothetical protein PI23P_02867 [Polaribacter irgensii 23-P]
Length = 271
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/269 (12%), Positives = 90/269 (33%), Gaps = 8/269 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + I + + ++L SV +++ R + +L I+
Sbjct: 1 MIFSVIAFAMMNAVVKYLGAFSVYQIVFFRSIGTLVFTVPIIL--------KHKIPMLGT 52
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+L+ + F L + +P+ +V ++FLKE++ +Q +
Sbjct: 53 NKKLLILRGVLGVFSLTCFFQTLNYLPVGTAVSFRYTSPIFAVIFAAIFLKEKIKLVQWL 112
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ + +LI+ L I SA + + ++ L
Sbjct: 113 LFGIAFIGVLIIKGFGVDVHLIGLIFAILSAVSLGLIFVVIRKIGNTENPFVIINYFMLL 172
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+V+ G ++ ++ + L+ G+ + + + +TV ++Y +
Sbjct: 173 ALVFGGVMSLNNWKTPDLTELTLLLSLGVFGYVGQLYMTKAFQSNETNTVAPLKYLEVVF 232
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I+ V + + + +++ +
Sbjct: 233 TIIIGVLWFGETYNGWTLLGVFLILSGLF 261
>gi|148547281|ref|YP_001267383.1| hypothetical protein Pput_2059 [Pseudomonas putida F1]
gi|148511339|gb|ABQ78199.1| protein of unknown function DUF6, transmembrane [Pseudomonas putida
F1]
Length = 311
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 87/305 (28%), Gaps = 8/305 (2%)
Query: 1 MGKGATKKEYSKGLSKENASL---PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVIS 57
+G + + +S + G V A L+ ++FL + + ++
Sbjct: 7 LGGACCRAVIERAMSSSTPLSGVNQPLRGIALVVVATFLFASHDALSKFLGGLYPIVMVV 66
Query: 58 HRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
V ++ L + + + A L F L
Sbjct: 67 W-----ARYVVHTLLMAGIFLPKSGLNVLRTRRPVLQTLRALSLLSTSLLFTTGLQYLPL 121
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT 177
+ F+ PV+ L + LKER+ Q +A ++ + +L++ G +
Sbjct: 122 AEATAVNFLAPVLVTALSAPLLKERVTVGQWVAVVMGFIGVLVVVHPGGAMFTPAILYPF 181
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
SA + L + + + L ++ G
Sbjct: 182 GSALGLCFYQLLTRILAAHDSPTTSNFYAGLCNTLAMSALVPFFWEVPRWDHALLMLALG 241
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + + A + + Y + + + Q DT+ + ++ ++
Sbjct: 242 GFGMTAHLLLTQAFRHAAPALLAPFSYCQIVFAGLLGFVVYSQVPDTLSLVGILVICLSG 301
Query: 298 VVYLL 302
+
Sbjct: 302 LGAAW 306
>gi|282849371|ref|ZP_06258756.1| putative membrane protein [Veillonella parvula ATCC 17745]
gi|282581075|gb|EFB86473.1| putative membrane protein [Veillonella parvula ATCC 17745]
Length = 314
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/304 (10%), Positives = 95/304 (31%), Gaps = 12/304 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
++G + +LWG++ QFL +++ +++ R L + + +F
Sbjct: 1 MKQYEVIGVIITLLGAVLWGVSGASVQFLSNFRDMNLEWLVTMR-LITAGLLTVIYAWFR 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G S+ +G++VF +A+ + ++ + + ++ P + +
Sbjct: 60 FGNSIFNVFHSVKDMLGLIVFGVFGMALCQYTYFRSIALAGAGIATVLQYLAPSMIIIYL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKT 187
V +R + + ++ +L ++ + + + + +L + ++
Sbjct: 120 LVRYGKRPSKGETVSVILALVGTICLMGNGDGLSIESFPMAVLVWGLLSAVGVAVYSISP 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + G + + + + L F +
Sbjct: 180 VDLLYKYGTLPIVGFGMLISGIVAAILFHQPNSYAVWDAWTVIGCFNVIFLGTIVSFNAY 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G+KR I+ P+ L + I +++ +V+
Sbjct: 240 LEGVKRIGAVPGSILSSIEPISAAFFGWAFLGNEFSLLGLIGMAMIIATVVIIAWDRQRT 299
Query: 308 SGKN 311
+
Sbjct: 300 IKRE 303
>gi|330992570|ref|ZP_08316518.1| Putative transporter ydfC [Gluconacetobacter sp. SXCC-1]
gi|329760769|gb|EGG77265.1| Putative transporter ydfC [Gluconacetobacter sp. SXCC-1]
Length = 305
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 84/295 (28%), Gaps = 1/295 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
N +LP+ L V A + W + L + + + + R + +V
Sbjct: 4 SMNTTLPSRRLFLAVTVAILSWASAYPVVRIALRGIPPVPLAAIRYALAALIAVAWLVLR 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L +D + G+ + IL + A +S + V
Sbjct: 64 RQPLPAARDMPRLVACAGIGISLYNILFNMGEVTVSAGAASLLIASSPLMTALIAMPVLG 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L L +A + +I + G + A SA + +
Sbjct: 124 ERLTAWGWLGSLLSLAGVGLIAGGQAGGITFGSGATLVLGAALCSATYIILLRQLLRRYD 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G +L I A + W + + + + +++ I +
Sbjct: 184 GLTCMAYILIIGAALLLPWLPRACAITLRASWPCVWAVVELGVFPAAIGYGAWTFVIGQM 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + YT P + +V + + + IV+ ++V
Sbjct: 244 GAARGSALLYTLPPVTMVLAFLLTGEIPGLRTLCGGAIVMAGVLVMNTWGHPARR 298
>gi|117919040|ref|YP_868232.1| hypothetical protein Shewana3_0587 [Shewanella sp. ANA-3]
gi|117611372|gb|ABK46826.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
ANA-3]
Length = 294
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 117/299 (39%), Gaps = 9/299 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + A +++G T L+++ + +S L++ R + + + I + +
Sbjct: 2 SQTAKPSGLIELHLAVLMFGGTALFSKLI-PLSALDITFLRCVVAALVLALLIKFRGKYI 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
SL + + + + I+++HW + A+ + ++F PV++V +
Sbjct: 61 SL-----ASKQDYLVAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ + II+ +L+++ ++++ L +A+ + + AR +
Sbjct: 116 TGNKIKLMDIISGVLVLIGVVLLIPEANLGNDTTLGIAVGIVSAMLFTARNLLQKRYFSQ 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V + E + L ++ + + +F+ +++
Sbjct: 176 YSGPHAMFYQTLVAAVFLMPWHQTELQTISLETWGLIILLGVVFTAAPHALFTSALRQLS 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
TVG++ P + ++ IL + ++ I I+V + + + + K
Sbjct: 236 AKTVGLVSCLQPFYGAMLALVILGEALNLNTLIGGTIIVATAIFETHQSHQSQRRKKNA 294
>gi|47567161|ref|ZP_00237877.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
gi|47556217|gb|EAL14552.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
Length = 308
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGLFILSFLLIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + LI + + F +
Sbjct: 179 SLIKKCGTTIVIGWGMLIGGIALLICNRSFGWSQLSQTFTPKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + ++++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIILSVIFLTMPQ 296
>gi|295093922|emb|CBK83013.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Coprococcus sp. ART55/1]
Length = 312
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/309 (10%), Positives = 88/309 (28%), Gaps = 18/309 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +L + +WG+ + + V R L + I
Sbjct: 1 MKSRQVRNSLLLVLTAFIWGVAFVAQRQGGDAVGPFSFNGIRSLIGGAVLIPVIFIIDRV 60
Query: 78 LSLLKDTLKNPKAVGMLV---FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ +++ T+L + L + ++ V +
Sbjct: 61 KPSDRKPSNRSDRKRLVIGGICCGTVLFLASSAQQLGLYMGTPAGKAGFLTACYILLVPI 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
S+FLK++ + ++ ++ L ++ + S + S + V A FA + +
Sbjct: 121 LSLFLKKKCGWNIWLGIVIAVVGLYLLCMSSSLSFQSSDLMVLVCALLFAVHILVIDHFS 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN--------------IPDTLFLIGYGLLN 240
+ + I + + F + L L
Sbjct: 181 PLVDGVRMSCIQFWVCGILSIFPAFFSEMHHSVAGIAAWVQPLGTLSAWIPILYAGVLSC 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + G + ++ + +++ IL + + + G++ A+++
Sbjct: 241 GVAYTLQIVGQNGLNPTVASMIMSLESVFSVIAGWIILGERMGVRQLAGCGLIFAAILLA 300
Query: 301 LLPTVINSG 309
+P
Sbjct: 301 QIPVGRGKK 309
>gi|302876232|ref|YP_003844865.1| hypothetical protein Clocel_3422 [Clostridium cellulovorans 743B]
gi|307686964|ref|ZP_07629410.1| hypothetical protein Ccel74_02331 [Clostridium cellulovorans 743B]
gi|302579089|gb|ADL53101.1| protein of unknown function DUF6 transmembrane [Clostridium
cellulovorans 743B]
Length = 282
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 93/278 (33%), Gaps = 6/278 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ A I + T+ ++ V L+ + + VF + L
Sbjct: 2 KDKSKGIIFIILATISFSSMSAATKVVKDVGALQKSFFTSIVTCVLVFIILKCNKTKL-- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L+ A A+ Y + ++P ++ + V LK
Sbjct: 60 ----FGHKENRKFLLLRAFFGALALITTYYTIDKMVLSDAVILGKLSPFFTILMSFVLLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ LQI+ ++ L++ L A+ SA +
Sbjct: 116 ERVSKLQIVTLIIAFSGSLLVIKPGFNSELLPALVGVASALFAGIAYSFIRKIGNKENFF 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + ++ + NI + FL+ G+ ++ + G K + +
Sbjct: 176 TIVFCYSTTTLLLTTPYILFSYDHMNIYELSFLLLAGVFSTLGQIFLTLGYTYGKAADIS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +Y + + I + D + + I++ + +
Sbjct: 236 MYDYVGIIYSAIIGYGIFNELPDIYSFLGYIIIIGSSL 273
>gi|218904509|ref|YP_002452343.1| transporter, EamA family [Bacillus cereus AH820]
gi|228946998|ref|ZP_04109295.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|218539626|gb|ACK92024.1| transporter, EamA family [Bacillus cereus AH820]
gi|228812730|gb|EEM59054.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 294
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++A++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSAIIATIGVIIVIGWDIEIGSYFIGTIVLVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|149203631|ref|ZP_01880600.1| hypothetical protein RTM1035_06183 [Roseovarius sp. TM1035]
gi|149142748|gb|EDM30790.1| hypothetical protein RTM1035_06183 [Roseovarius sp. TM1035]
Length = 301
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 96/288 (33%), Gaps = 7/288 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M G + VF A ++W L + +++ V +++ +R + + +
Sbjct: 12 MRGYVLVFLAGLVWSTVGLGIRLIDEAQVWQILFYRS----ASMTLLLYVVIRLRTGQDA 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ V L + I+A+ T + +P+++ LG V L+E +
Sbjct: 68 LRLALQMGWPGVIGGLSLVAAYTGAIFAIQTTSVANAMMLFACSPLLAAILGRVVLREYV 127
Query: 144 NHLQIIAALLIILSLLIMTL---HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+A ++ + +M + +LA + + T+ G + +
Sbjct: 128 RPQTWVAIVVAACGIAVMVWDKFGGAALVGNLAAIGSAVGFATFTITLRWGKATEMMPAI 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + + F G + + L L +++ G + + +
Sbjct: 188 FLSGLFGMALMAAICFWLGLSLRISSADTALSLGMGVFQVGLGLILYTIGSRTVPAAELT 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ +L V IL + T I I++ A+ L
Sbjct: 248 LLSLAEVVLGPVWVWLILGETATTNTLIGGTILLGAIAGNALSGARRR 295
>gi|220904146|ref|YP_002479458.1| hypothetical protein Ddes_0873 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868445|gb|ACL48780.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 305
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/310 (11%), Positives = 90/310 (29%), Gaps = 20/310 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G L ++WG T + T+ L S +E++ R ++ A
Sbjct: 2 SDKKNSVGHLAALLCILVWGATFISTKVLLRDFSPVEILFFRFSLGFVALWLAC------ 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-S 136
+ + +++ AL V+P + L
Sbjct: 56 -PRALRLDDKKQEWLFAGAGLAGVTLYFLLENIALTYTFASNVGVIVAVSPFFTALLSFW 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP------- 189
+ E+ + IL + +++ L + + +
Sbjct: 115 LLAAEKPGLNFFLGFTAAILGIGLISFSGSASLQLNPLGDLLAVLAGLAWSFYSILTRKI 174
Query: 190 ----VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
S + + L + + F G F + ++ F
Sbjct: 175 LAFGYNSLQVTRRCFFYGLVFMLPSLPFMEFHWGLERFAQVVNWGNMAFLGLGASALCFV 234
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++ IKR + Y P++ ++++ IL + I + + + + + + +
Sbjct: 235 AWTFAIKRLGAVKSSVYIYLVPVVTVITAALILDERITWMAGMGTVLTLAGLALSEMRQF 294
Query: 306 INSGKNKTKK 315
K + +
Sbjct: 295 RLWKKAASLR 304
>gi|126724855|ref|ZP_01740698.1| hypothetical protein RB2150_13506 [Rhodobacterales bacterium
HTCC2150]
gi|126706019|gb|EBA05109.1| hypothetical protein RB2150_13506 [Rhodobacterales bacterium
HTCC2150]
Length = 296
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 95/295 (32%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G LF+ + + + + + + + + + R L S+ + +V+
Sbjct: 5 SQNTRGALFMIGSMAFFTMNDTAMKAVGTSLPMFQSLFIRALISVILMTMVVVWLGQHRQ 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +G++ +T+ V FF AL + + P+ G++FL
Sbjct: 65 KIP-----RRDIGLIAARSTMDVVSVYFFFNALFNMPFANLAAILQILPLTVTLAGAIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++A L+ + +L + +I + + I
Sbjct: 120 SEPIGWRRMVAILVGFVGVLFIVKPGAESFNVYSIYGLATVVVVTARDIFARKISSNVPS 179
Query: 200 MCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V LA + + ++ + L + ++ ++S
Sbjct: 180 FIVALANAMAILLFAGLALPFTPWESVSLEQLGLIGLAACLIILAYFFSVATMRAGEISF 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V Y+ L I+ + + D IVV + LL +N+T
Sbjct: 240 VTPFRYSGLLFAILLGFIVFGELPDVWTVFGSVIVVATGLFTLLREARLKRRNRT 294
>gi|221200940|ref|ZP_03573981.1| integral membrane protein DUF6 [Burkholderia multivorans CGD2M]
gi|221207136|ref|ZP_03580147.1| integral membrane protein DUF6 [Burkholderia multivorans CGD2]
gi|221173210|gb|EEE05646.1| integral membrane protein DUF6 [Burkholderia multivorans CGD2]
gi|221179512|gb|EEE11918.1| integral membrane protein DUF6 [Burkholderia multivorans CGD2M]
Length = 299
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/280 (13%), Positives = 87/280 (31%), Gaps = 7/280 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + I + + EV R+L+ + + ++ +K+
Sbjct: 17 IALILISMFCFAIVDALGKAVALGYPANEVTFFRMLFGIVPAVLVSLRGEPLIARVKNID 76
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A L G F L + + V L + L ERL
Sbjct: 77 LR-----GQTTRALTLLGASGLFFAGLPYLPLSEAVAIVYSEAIFVVILAPLLLGERLIA 131
Query: 146 LQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+AA + + ++++ + + SA C A I + + +
Sbjct: 132 RNAVAACVGFIGVILVVRPHGSLSTFIGPCLLLLSAVCGALSMIQIRRLKVSDDSSLTVL 191
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
F V G S + + D + + + +F+ ++R +T+ Y
Sbjct: 192 FFTTFGTVVTGISLLFAWRTPTLRDLFIMALLAIFATAGQLLFTVAVRRENAATLAPYTY 251
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
T+ + + + + +D V + +V + + +
Sbjct: 252 TSIIWATLFGFVVWGETLDLVPVLGIIAIVGSSIAVAIRE 291
>gi|323487283|ref|ZP_08092584.1| hypothetical protein HMPREF9474_04335 [Clostridium symbiosum
WAL-14163]
gi|323694280|ref|ZP_08108455.1| hypothetical protein HMPREF9475_03319 [Clostridium symbiosum
WAL-14673]
gi|323399399|gb|EGA91796.1| hypothetical protein HMPREF9474_04335 [Clostridium symbiosum
WAL-14163]
gi|323501664|gb|EGB17551.1| hypothetical protein HMPREF9475_03319 [Clostridium symbiosum
WAL-14673]
Length = 303
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 87/288 (30%), Gaps = 13/288 (4%)
Query: 36 LWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + + V V R + ++ ++F LK +
Sbjct: 19 IWGSIYVTGKMISDDVPASLVACLRCVTAMIPLYFM------SRKHLKTKIDRKDWKYFF 72
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ A + + + + +TPV L ++ LKE++ ++ + +L
Sbjct: 73 LVGALGYFLTVQMIQLGIALTGASMAALINAMTPVAVTILAAIILKEKITPVKCLCLVLA 132
Query: 155 ILSLLIMTLHSGIPLLSLAIAV------TWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ +++T + ++ IAV +++A + + +
Sbjct: 133 LAGTIVITSGASTQGETMGIAVVLVGVVSFAAASVYMRRLTAKYPAVLVTTYSMAISLIF 192
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
V + + + L + ++ + ST + P
Sbjct: 193 HIPVGIVTVCTRPVTITPLGVAIILYLGFAGSGVAQYTWTKCLSMLPASTCSLFYPLQPA 252
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ ++L + I ++ + +V+ K+S
Sbjct: 253 FAALLGAWLLGETFTPAFFIGLMLISLDVVLNTWEARQMDKALTAKES 300
>gi|313108539|ref|ZP_07794540.1| hypothetical protein PA39016_001380038 [Pseudomonas aeruginosa
39016]
gi|310881042|gb|EFQ39636.1| hypothetical protein PA39016_001380038 [Pseudomonas aeruginosa
39016]
Length = 297
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 82/288 (28%), Gaps = 3/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +L+G+T ++ + L S ++ R L+++ +
Sbjct: 1 MNRRSALAALHGGALLFGLTGVFGK-LASASPGVIVFGRALFAVLALGLFARLAGQAWRA 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L A+ L+ + ++ + SF F + +
Sbjct: 60 LGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFRERIHL 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ +++ L++++ L AI + G
Sbjct: 120 AEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLANRSNSGQVG--PVQ 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + F+ GE L + + +F + K T
Sbjct: 178 AALWQNLVVALCLLPFAVGELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKARTAA 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ P+ I + + + + ++V+A+V+ N
Sbjct: 238 LVFALEPVYGIAFAWLLFHETPGPRMFLGGALIVLAIVLSARLGARNR 285
>gi|296388290|ref|ZP_06877765.1| putative permease [Pseudomonas aeruginosa PAb1]
Length = 297
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 82/288 (28%), Gaps = 3/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +L+G+T ++ + L S ++ R L+++ +
Sbjct: 1 MNRRSALAALHGGALLFGLTGVFGK-LASASPGVIVFGRALFAVLALGLFARLAGQAWRA 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L A+ L+ + ++ + SF F + +
Sbjct: 60 LGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFRERIHL 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ +++ L++++ L AI + G
Sbjct: 120 AEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLAYRSNSGQVG--PVQ 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + F+ GE L + + +F + K T
Sbjct: 178 AALWQNLVVALCLLPFAVGELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKARTAA 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ P+ I + + + + ++V+A+V+ N
Sbjct: 238 LVFALEPVYGIAFAWLLFHETPGPRMFLGGALIVLAIVLSARLGARNR 285
>gi|218676875|ref|YP_002395694.1| Transporter, drug/metabolite exporter family [Vibrio splendidus
LGP32]
gi|218325143|emb|CAV27022.1| Transporter, drug/metabolite exporter family [Vibrio splendidus
LGP32]
Length = 284
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 88/281 (31%), Gaps = 16/281 (5%)
Query: 30 VFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + + +++ + V E+++ R L SL + + K
Sbjct: 1 MILSAFGFALMSACVKYISNYGIPVFEIVAARALVSLIISYIDV--------KRKGISIW 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L + YA+ T + +V PV + LG +FLKER+
Sbjct: 53 GNNKPLLFVRGAVGTAALMCVYYAVTTLPLAEATILQYVHPVFTALLGVLFLKERVQKST 112
Query: 148 IIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+I + L +M S + + A+ + + V
Sbjct: 113 MICIAFCLAGLQVMVQPSMNSGVNSELPMFSIMVALLGAFGSSIAYVIVRKLSQTEDSSV 172
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ L + + F ++ T+ L+ G+ + ++
Sbjct: 173 IIFYFPLVALPISTALIWNDFVWPSLFLTVMLVLVGIFTQIGQYGLTKAMQTQAAGKASA 232
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + + V+I + + G++V ++ +
Sbjct: 233 YSYVQIVFSALLGVWIFNEIPSVWTYLGGGLIVTGALINVF 273
>gi|303327505|ref|ZP_07357946.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
gi|302862445|gb|EFL85378.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
Length = 331
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 18/312 (5%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFA 70
+ +++ ++ G L +WGI PL+ + + +++ + + R + +F
Sbjct: 10 QSMNRRRQAVGKFYGLLA--LTAAIWGIQPLFIKLAVREITPVSLTVVRFVLISATIFLI 67
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + +AV+ L + TP +
Sbjct: 68 M----RWRHRTPLLPPLSALFPLFCMGVCGVAVNNVAQFTGLQYSTVGNATLIASTTPAV 123
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWS 179
+ L +FL+ERL +Q + ++ +L +L++ LL + W+
Sbjct: 124 TALLAVLFLRERLLPIQWLGIVISLLGVLVLISKGSLAILLRISFNYGDLLFFFAQLGWA 183
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
AY + S + V + L +
Sbjct: 184 AYMLIGFRVMHHLSALGTTAWAGVFGALTTLVYGLITDELHYAPLSPAGMAYMAYIIWMG 243
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ G+K S + PL+ + + V +L + G ++ + +
Sbjct: 244 GVCAMVFWNLGVKMVGASLAAVFLNIMPLVGVAAGVIVLDEDFYWQECFGAGGILSGVYL 303
Query: 300 YLLPTVINSGKN 311
I +N
Sbjct: 304 LTQARQILHRRN 315
>gi|169863381|ref|XP_001838312.1| integral to membrane protein [Coprinopsis cinerea okayama7#130]
gi|116500605|gb|EAU83500.1| integral to membrane protein [Coprinopsis cinerea okayama7#130]
Length = 439
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 81/294 (27%), Gaps = 8/294 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSV----LEVISHRVLWSLPGVFFA 70
+K A + + G L + + + + + + L + L++I R+ +
Sbjct: 71 NKAKAKVRSNTGLLLIAASQAFFSLMNVAVKKLNTIDPPVTALQLIVVRMGITYLCCMVY 130
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
++ L +L F Y+L + F++P+
Sbjct: 131 MLAAKIPDPFLGP----KGVRILLAFRGFTGFFGLFGIYYSLQYLSLSDATVLTFLSPMC 186
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ G++ L E L Q +A + + V + +
Sbjct: 187 TAVTGALLLGETLTKRQALAGGKSRVFRCAHLRAQRKLQSVALLGVLGATGAYTTIRAIG 246
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + + L G+ + + G
Sbjct: 247 KRAHPLHVLTSFSSQCVIVAAIGMIVKHESFVIPARLAWLAMLAMIGVFGFLAQVLLTMG 306
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++R S + YT + + + I +++ + + L
Sbjct: 307 LQRETASRGSMAVYTQIVFATIFERVFFNIKPSLLSAIGTSLIIGSAMYVALSK 360
>gi|158321194|ref|YP_001513701.1| hypothetical protein Clos_2169 [Alkaliphilus oremlandii OhILAs]
gi|158141393|gb|ABW19705.1| protein of unknown function DUF6 transmembrane [Alkaliphilus
oremlandii OhILAs]
Length = 299
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 96/300 (32%), Gaps = 13/300 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + + WG + + T+ L+ ++ ++ R + +
Sbjct: 2 SKQLKADLALLAVTLAWGSSFVLTKNALDHIATFNFLAIRFILAAIVSAIIFY------- 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ + IL + L + F + VI L ++ L
Sbjct: 55 -KNIIKADKNSIKYGMMIGAILFTGYALQTTGLQYTSASKSGFITGFSVVIVPVLSALLL 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSEG 195
K + N +I + IL L +TL S + L S + A A + +
Sbjct: 114 KIKPNKYAVIGVVCAILGLGFLTLDSSLSLNSGDLLTLIASFMFALHIITVGKYTVAVDS 173
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + ++++ G I + S F + + K
Sbjct: 174 ITMAIVQIGTVGVLSLIFSFAIEQPILPTGKEIWIPMFILSIVCTSVAFIVQNVMQKFTS 233
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ ++ P+ + + F+ + + +++ M+V L K K++K
Sbjct: 234 PTHTALIYSGEPVFSAIFAYFVSNEILTRRAIFGCALILAGMIVSELDWSSIFNKEKSEK 293
>gi|297565220|ref|YP_003684192.1| hypothetical protein Mesil_0771 [Meiothermus silvanus DSM 9946]
gi|296849669|gb|ADH62684.1| protein of unknown function DUF6 transmembrane [Meiothermus
silvanus DSM 9946]
Length = 286
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 94/282 (33%), Gaps = 11/282 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L A +WG + ++ LE + + +++ R++ + + + L +
Sbjct: 6 RRGLLAGLLAASIWGGMYVVSKVVLEVIPPITLVALRMVVAFVCMVLWLRLLGRDWRLPR 65
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ A+ L S +P+++V L ++ E+
Sbjct: 66 -----KLWAPVTAMGLIGYALSITAQFIGTGLAGAALGSLITTASPLVTVALAALLRIEK 120
Query: 143 LNHLQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ I + + + +++ +G+ L +A +T+
Sbjct: 121 VSARAWIGLGIALGGVWVLSGSANANLAGVLWLIVAAVTWGILGLIGAQTVRQHDPALVS 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ AL +V + + L + + F + Y + +A
Sbjct: 181 AWASLVGGVALLALVPGELARAPIGEISLGTVAGVLYLGVVSTAVAFTFWVYAVAKAGSV 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
GI + P++ + +L++P+ + ++ I +V
Sbjct: 241 LSGIAFFAQPVVGGLLGWALLEEPLGLSFLLGATLLFIGALV 282
>gi|300865846|ref|ZP_07110591.1| membrane hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300336145|emb|CBN55749.1| membrane hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 302
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 112/285 (39%), Gaps = 3/285 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L+V A LWGI ++ + ++ ++ + R + S + ++ +G L + +
Sbjct: 19 GVLYVASAGFLWGIYCIFYKGFPEIEAYQIAAFRAIGSFIFLSLFVLPNNGWLKV--SAI 76
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L SA L +H +++A+ S F++ + S+ LG + +ER
Sbjct: 77 LKSGNLLALTSSAFFLGMHVILYVFAIQQGCVMECSAGMFLSYIASMILGLIVFRERYQL 136
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L +A +L + + ++T ++ A+ + ++E + +A+
Sbjct: 137 LNWLALILGVAATALLTSNAEEFPWFAIGIGLTWAFYGLARKKASANAEPIVQTLVEMAL 196
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFL-IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ ++ I + ++ G KR LS +G+
Sbjct: 197 LAVPSAIYLLCFANLETVNNLPELNRLWLILGCGATAIPSVLYGEGAKRLPLSALGLFHS 256
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+P + + ++F+ + V+ FG++ +A+ +Y S
Sbjct: 257 LSPSIQFLLAIFVYHETASPVKMQAFGLLWLALALYSYQQWKRSH 301
>gi|295095302|emb|CBK84392.1| Predicted permease, DMT superfamily [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 314
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 95/296 (32%), Gaps = 12/296 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ +S + R+L++ +
Sbjct: 16 STRKGMLNVLIAAVLWGSSGVCAQYIMEKSHISSPYLTMVRLLFTGVILLTLSFVHGD-- 73
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L FS F+ + + F++P + V ++
Sbjct: 74 KIFSVIKNRKDALSLLFFSLAGALTVQLTFLLTIEKSNAATATVLQFLSPTLIVAWFALA 133
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R + A ++ ++ H L IA ++A + +
Sbjct: 134 RKTRPGIFVLSAIFTSLVGTFLLVTHGDPTSLSISPAALFFGIASAFAAAFYTTYPSTLI 193
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + A + G F + F + + F ++ G
Sbjct: 194 ARYGTLPIVGWSMLIAGLMLTPFYAGRGTTFVIDGGLLLAFFYLVVIGTALTFSLYLKGA 253
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I+ PL + SV +L + ++V ++V+ + +
Sbjct: 254 QMIGGPKASILSCAEPLSSALLSVVLLGVAFTLPDWLGTLLIVSSVVLISMDSRRR 309
>gi|117619277|ref|YP_858425.1| transporter [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117560684|gb|ABK37632.1| transporter [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 299
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/292 (9%), Positives = 81/292 (27%), Gaps = 7/292 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A +WG+ + + ++ + R L + + + + +
Sbjct: 5 MMLLMAAAIWGLGFVAQRLGMDHMGPYTFNGLRFLLGAASLLPLLWWLKSRQPKAQPGDR 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G L+ + + + L T + +I V + + L+ +
Sbjct: 65 RLLLTGGLIAGTVLFSAASLQQVGLLYTTAA--KAGFITGLYIILVPVIGLALRHKTGAN 122
Query: 147 QIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ AL+ + L ++ G L + + A +
Sbjct: 123 TWVGALIAMAGLYYLSVTEDFTIGYGDLLQVVGALFWAVHLLVLDHYSSRVAPIRLAGVQ 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L + L + + + G + A + I+
Sbjct: 183 FVVCGLLSLGTALVIETPSLSGAVAGWQALLYAGLVSVGVGYTLQVVGQRCAHPAHAAII 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + V +L + +D + +++ M++ + + K
Sbjct: 243 LSLETVFAAIGGVLLLGETLDERAMVGCALMLAGMLISQIRLRWWWKSRRDK 294
>gi|42525708|ref|NP_970806.1| hypothetical protein TDE0190 [Treponema denticola ATCC 35405]
gi|41815719|gb|AAS10687.1| membrane protein, putative [Treponema denticola ATCC 35405]
Length = 295
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 93/286 (32%), Gaps = 12/286 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ + + + L + + ++ R L + F ++ +
Sbjct: 4 TSKQKGIMFLILSALCFASMNLSAKLAGSLPSMQKAFFRNLIAAAVSFTVLI------NS 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ N K + A + YA+ S + P ++ +FLK
Sbjct: 58 KEKFHLNKKNLPFFFMRAIFGTMGIVGNFYAIEHMLLADASILAKLAPFFAILFSFLFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
E++ QI+A + + L++ + G + +L A A + S +G
Sbjct: 118 EKIKLYQILAVITAFSASLLIIKPAFADTGHVIAALVGACGGMMAGAAYTCVRCLSLKGE 177
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ V ++ + + + L GL + + A
Sbjct: 178 KGPLIVFFFSFFSILMLFPLFIIFYHPMSLYQIIMLL-IAGLFGTGGQFCVTAAYAHAPA 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ + +YT + + L + D + F I+ A+ +++
Sbjct: 237 GSISVYDYTQIVFSAIFGFAFLGELPDRWSLLGFAIIF-AVALFMF 281
>gi|229196024|ref|ZP_04322776.1| Transporter, drug/metabolite exporter [Bacillus cereus m1293]
gi|228587406|gb|EEK45472.1| Transporter, drug/metabolite exporter [Bacillus cereus m1293]
Length = 322
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 95/297 (31%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L + +S +++ R+L S + +
Sbjct: 5 NRLKGIIMVVIGACLWGLSGTAAQQLFQYDNISTEWLVTIRLLISGVILLIISSLGTRKK 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 65 EIFSIWKQRSDATKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 125 WNVRPSKIDFISIALSLVGTFLLLTNGSVHNLAVSTPAIVWGILSGLSLAFYSLYSKELL 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + + E L + + +F
Sbjct: 185 DRWSSSVIVGWGMIIGGMGVTIVHFITTKEFILLSTMKYVKLNTLPLITFVIIFGTLIAF 244
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 245 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILS 301
>gi|83646420|ref|YP_434855.1| DMT family permease [Hahella chejuensis KCTC 2396]
gi|83634463|gb|ABC30430.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Hahella chejuensis KCTC 2396]
Length = 302
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 105/292 (35%), Gaps = 8/292 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
FVF A + + + + E V +++ R ++ + V G+ + K
Sbjct: 8 KAMTFVFIAVVAGTGMDAFVKQVGEDVDTWQLLFLRWCFAALLLIPMAVKEGAGIFVWKS 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + ++ +L Y+L + +F P+ V + +++L+E++
Sbjct: 68 PKAHLMRGVLNCVASFLL-------FYSLANLPLAVVVTIFFAEPLFIVPISALWLREKV 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+A L+ + +L++ SG I A FA I + ++
Sbjct: 121 APGHWLATLVGFIGVLLIARPSGDFAPLEIIYPLAGALGFALLHIGTKKYGSQESPISLM 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+ ++ +G + ++ D F+ +L S + G++ + +
Sbjct: 181 FWLAILTILMSGPMAVAEWSPVSVKDFSFIGLIAVLGSVYSYFWIVGLRIGSAAIAAHIS 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y A L + + D + G++ +++++ + + + +
Sbjct: 241 YLALPLAYLIGWAFFDETPDFYTLLGSGVIFLSVLMVSVKNGMKLPLPRALR 292
>gi|308235196|ref|ZP_07665933.1| hypothetical protein GvagA14_03043 [Gardnerella vaginalis ATCC
14018]
Length = 331
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 82/292 (28%), Gaps = 4/292 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +WG + + +++ LE ++ R+L + + K +
Sbjct: 23 IMLLLCAAIWGGSYVSSKYALEVFPPQWLMGVRMLGACIIMGAVFFKTIRKNFTKKLIIP 82
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ S + + + + L
Sbjct: 83 SLLTGVTYYASLVTQTEGLRWIDPGRSAFLTAAYCVIAPFSAWMIIRKKPTLLGIIAALT 142
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ L+ L + L + I A+ + ++
Sbjct: 143 CVVGVGLVALKPGSLVLTLSHGDVLTLICAAVFAFNLTYLAYYSRQYNPVALTFGQFSVS 202
Query: 207 ALFYVVWNGFSGGEHFFL---GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ S F I T ++ I +Y + + ++
Sbjct: 203 GVLFLCGAAISEPLPNFNAEDNWITITNMFYLIVIVTVLAQIIQNYTLIYLSTANASVIM 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
T L ++ S + + + +V I F ++ A+++ L I K K K+
Sbjct: 263 CTECLFTLLFSSILYNERVTSVAFIGFALIFAAILLASLAEHIELIKIKNKQ 314
>gi|295700630|ref|YP_003608523.1| RarD protein, DMT superfamily transporter [Burkholderia sp.
CCGE1002]
gi|295439843|gb|ADG19012.1| RarD protein, DMT superfamily transporter [Burkholderia sp.
CCGE1002]
Length = 298
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/289 (17%), Positives = 111/289 (38%), Gaps = 4/289 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SL 80
G A ++ + Y L+ +S L++ + R++W++PG + +L
Sbjct: 7 RRGIALSVGASAMFALLSAYATLLKPLSGLDIFAWRIVWTVPGALLLVAVRKRLPILHAL 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +K PK ++ +A +L V F++A L + S YF+ P++ V +G
Sbjct: 67 VVRMMKQPKLGVAMIVAAGLLGVQLWLFLWAPLHGRMLEVSLGYFLLPLVMVLVGRFHYH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ LQ A + + +G + V + + +
Sbjct: 127 ERLDGLQWFAVACAAVGVAHELWVTG-AFSWPTLVVALGYPPYFLLRRQINQDSLAMFTV 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + V + L L G G L++ + + ++ G
Sbjct: 186 EMALLLPVAIVFIVSGGSLQAIAARAEMWLLLLPGLGALSTLALASYLKASRLLPVALFG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ Y P+L++ S+ +L++ + + + + +A+ + L +V
Sbjct: 246 ILGYVEPVLLVFVSITLLRETLSVAQLATYVPIWVAVALTALHSVRFVR 294
>gi|266622366|ref|ZP_06115301.1| integral membrane domain protein [Clostridium hathewayi DSM 13479]
gi|288865918|gb|EFC98216.1| integral membrane domain protein [Clostridium hathewayi DSM 13479]
Length = 288
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 79/288 (27%), Gaps = 8/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ C+ + + L+ + + ++ R L + +
Sbjct: 2 KSRYKGIVFIVCSAFCFALMNLFVRLSGDLPSVQKSFFRNLVAFFFALILM------KRD 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L + V YA+ S ++P ++ + LK
Sbjct: 56 HVGFSGKKENLWPLFLRSAFGTVGILCNFYAVDHLVLADASMLNKMSPFFAILFSFLILK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ +Q + L + S + + + + A S G E
Sbjct: 116 EKVKPVQAVIVAGAFAGSLFIIKPSPLNMELVPAVIGLLGGMSAGAAYTFVRSLGIRGEK 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPD--TLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + +L+ GL + + A
Sbjct: 176 GPFIVCFFSGFSCLATLPYLLVRFHGMTLEQLGYLLLAGLAAAGGQFAITAAYCHAPARE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + +Y+ + V I Q D + + I+ VV L
Sbjct: 236 ISVYDYSQIIFSAVLGFVIFGQVPDRFSVLGYVIICAMAVVMFLYNNR 283
>gi|197117206|ref|YP_002137633.1| hypothetical protein Gbem_0814 [Geobacter bemidjiensis Bem]
gi|197086566|gb|ACH37837.1| DUF6-related membrane protein, putative [Geobacter bemidjiensis
Bem]
Length = 308
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 83/293 (28%), Gaps = 13/293 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ T ++ WG + ++ + ++ + + R + + +
Sbjct: 10 RSSKATFWLILTTFFWGGSFIFNKIGFREIPPVTFLFFRFALATLLMAAICL-------- 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ N + + LA F+ + F + +I L F +
Sbjct: 62 PRLKRFNRNVLRKGLIVGAALAATNLSFVLGVSGTSVSRAGFLNNLFVLIIPLLCFAFWR 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG----F 196
ER + L + L + + T A A I V +
Sbjct: 122 ERFDRWTATGLFLALAGLWQLAQGGVEGFNKGDLLSTLCALFIALHIISVSKLLRDEDVY 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + A + F +G + L F + + +
Sbjct: 182 LLSLVQFATVTAVGGLLFLVLPAPPFAIGPVSGGSLLYCAIFPTVICFTLQNTYQRYTTP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ G++ P+ ++ IL + + ++ ++ ++V+ L +
Sbjct: 242 TKAGLIYTMDPVWSMLGGTLILGERLTAGESLGCSLIFASVVLPLSIKRLRER 294
>gi|76811648|ref|YP_331952.1| hypothetical protein BURPS1710b_0539 [Burkholderia pseudomallei
1710b]
gi|76581101|gb|ABA50576.1| putative membrane protein [Burkholderia pseudomallei 1710b]
Length = 512
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 92/282 (32%), Gaps = 13/282 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITP-LYTQFLEQVSVLEVISHRVLWSLPGVFFAI 71
++ AS G L + A ++ G L + + + V+ R L+ +
Sbjct: 208 HMASNPASSDARRGALEMVVAMLMSGTIGWLVVSSRQHL--MNVVFFRCLFGGATMLIIC 265
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
LL+ L + + + + + +W A + + Y P +
Sbjct: 266 AALG----LLRRDLLTKRTIAFALLGSVAIVANWVLLFAAYSRASISMATAVYNTQPFML 321
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIM------TLHSGIPLLSLAIAVTWSAYCFAR 185
V LG++ +ERL +L L ++ L L +A+ +A
Sbjct: 322 VALGALVFRERLTASAAAWLVLAFGGLALVVRVEPAVLAVPGEYLEGVALALGAAFLYAV 381
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+I +G + L + + F + + + ++
Sbjct: 382 SSIVTKRLKGTPPHLIALFQTGVGVLALAPFVHYDALPATAGQWLDLVALGVVNTGIMYV 441
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ I++ +T+G + + P++ IV F Q + +
Sbjct: 442 LLYGAIQKLPTATIGALSFVYPVVAIVVDRFAFGQTLAWSQV 483
>gi|317407150|gb|EFV87146.1| integral membrane protein [Achromobacter xylosoxidans C54]
Length = 318
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 96/301 (31%), Gaps = 19/301 (6%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + WG + + + +S + + R ++ + + + L++
Sbjct: 23 MLLLCVCWGFQQIAIKLVAADISPIMQVGLRSAFAALVLGAVV-----WRAEGSRALRDG 77
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
++ + T ++ F Y ++ L +ER+ LQ
Sbjct: 78 TLGAGVLVGLLFGFEFLAIAQGLVYTTASHMSVFLYTAPIFTALGLHWRVPEERMAPLQW 137
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE--------- 199
+ + + + L +G P + A + + + I
Sbjct: 138 LGVAVAFGGIAVAFLGNGQPQAANAASNMLLGDALGLLGGLLWGATTVAIRRTALSEAAP 197
Query: 200 ----MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+AI AL +V+ +G ++ + + + ++R
Sbjct: 198 SKTLFYQMAIAALVLLVYAAATGNAGIRYTPAAMLSVAFQSVVVALSSYLAWFWLLRRYL 257
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S + I+ + PL + V IL +P+D + +V+ + + ++ + K+
Sbjct: 258 ASRLSILSFMTPLFGVSFGVLILDEPLDGAFVVGALMVLAGISLVSGAGLLREKLRRGKR 317
Query: 316 S 316
+
Sbjct: 318 A 318
>gi|269114760|gb|ACZ26223.1| SxtPER [Aphanizomenon sp. NH-5]
Length = 352
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 88/294 (29%), Gaps = 7/294 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + ++G L + A +++G T+ + QVS +I+ R + +
Sbjct: 19 TTSAPENNRYILGVLSIILATLIYGSIFPITKGLISQVSKEVLIAVRFTMAAVVFAPFL- 77
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+L +++ +G+L + ++ A A F S + + + +
Sbjct: 78 -----RNLNVRLVRDGAILGLLSWCTSVSATFGLETFSANRGAFAFGLSVIFVMLFDLLL 132
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L ++ +G LL +
Sbjct: 133 GKRIAPRAILGAVLSFNGIGVMFWGSGESLNGAGWLLLCAVFNTAYLIAIQQFVQRHPTV 192
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L+ V ++ + + + + G +
Sbjct: 193 QLVAVSLWMPAVAGLLWAVPELTTHFEAIVASLSVNLSGLIYLVVVDTVVFTWLEMIGQR 252
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ V I++ PL+ + S ++L + + I +++ AM++ + I
Sbjct: 253 WVPANEVAILQTLEPLVTAIISFWLLGETFEIHDFIGANMILAAMILIVTRPKI 306
>gi|255520970|ref|ZP_05388207.1| hypothetical protein LmonocFSL_07066 [Listeria monocytogenes FSL
J1-175]
Length = 319
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 100/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKWEFGLIFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
VFL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 VFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + FG ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|210622353|ref|ZP_03293122.1| hypothetical protein CLOHIR_01070 [Clostridium hiranonis DSM 13275]
gi|210154341|gb|EEA85347.1| hypothetical protein CLOHIR_01070 [Clostridium hiranonis DSM 13275]
Length = 311
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/297 (10%), Positives = 82/297 (27%), Gaps = 9/297 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGG-LS 79
G V A WG+ + ++ L +S +++ R + ++ L
Sbjct: 4 RKKGITLVLIATTFWGMMGINSRTLSLAGLSAMDIAFIRCSIAGVLFTIYMLIRKPEELK 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ G++ F + + + + + +V+ +V
Sbjct: 64 QKLSGILVGCLYGVVCFVLGFMTYNVSVERVPISVATVLMFTNPIWVSIFGAVVFKDKMT 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
K+++ + + I +S ++ T L +
Sbjct: 124 KKKVLVICMCIVGCICISDVMSTGGANLDVIGIAAGLINGMTFAMQIIIPRFFEGKYSKD 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ F+ ++ + + L L + +
Sbjct: 184 AILVYGFISSTVVLSFFTDFSNIAAAVTGPNSMVVIANMLAISVLSTFIASTFYVKSTEY 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ P+L + + FI + + + + IV++A + + K
Sbjct: 244 IETQVTSILVSLEPILGSIFAFFIFGETMSQTQLLGAAIVILAACILETDLSKITEK 300
>gi|182439966|ref|YP_001827685.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178468482|dbj|BAG23002.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 360
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 78/272 (28%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + E + +V R+L + A+ L T +
Sbjct: 53 SLIWGFSFLLIKVGTEGYAPFQVTFGRLLAGTAVLVAAMAMRRERLPRSARTWGHLTVAA 112
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L+ + + + + + V L R + L
Sbjct: 113 LLLNALPFSLFSYAELTIPSTLAGICNATSPLWGMALSVVALSEDRPTRRRVAGLGVGFL 172
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC-----VLAIPA 207
++ L SG+ L +A+ S + G L +
Sbjct: 173 GVLTVLGAWQGFSGLDLPGTGMALLASFCYPVGWIYVRRTLAGTEASTLALTGSQLFLGT 232
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L V +P L GL + ++ +T ++ Y P
Sbjct: 233 LQLAVVTPVFTSAPTSFPLLPTLSVLALGGLGTGLAVLLQFGLVQEVGPTTAQMVTYFIP 292
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + V +L + + + IV++ +
Sbjct: 293 VIATAAGVALLGEQLAWNTPVGALIVLVGAAL 324
>gi|322386768|ref|ZP_08060392.1| DMT superfamily drug/metabolite transporter [Streptococcus
cristatus ATCC 51100]
gi|321269050|gb|EFX51986.1| DMT superfamily drug/metabolite transporter [Streptococcus
cristatus ATCC 51100]
Length = 318
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 104/300 (34%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ GTL+ A I WG++ Q+L S L + + R+L + + +
Sbjct: 17 SKVLRGTLYTLAAGIAWGLSGTSGQYLMEHGFSALSLTNVRLLLAGLVLMMLAYATNKD- 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + + + +F+ L ++ ++ A+ + ++ PV + +
Sbjct: 76 SFKEIWKDKSSLLHISLFAVLGLFINQYAYLAAIHETNAGTATVLQYLCPVGVLAYTCIK 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVG 191
+ QI + +L I ++ H + LS+ I ++ + I +
Sbjct: 136 DRVAPTVAQICSMILAIGGTFLIATHGQVNQLSMTPKGLFLGIFSAFTYALYILLPIGLI 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + A ++ + + + F + +F G
Sbjct: 196 KKWGSMLVIGIGMTIAGILLLPFSGIFQHQWQFRLDILLALVGIIVIGTIFAYTVFLKGT 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+ + + + G++++A+++ + +I K
Sbjct: 256 SLVGPVKSSLLASIEPISAVFFAFVIMNEHFYLLDFVGMGMILLAVLLISVKDLILEKKK 315
>gi|254463899|ref|ZP_05077310.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206684807|gb|EDZ45289.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 286
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 88/282 (31%), Gaps = 8/282 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + + ++L + E R L L + P
Sbjct: 1 MVVTGLCFVAVTALVKYLGSRIPPAESAFLRYLLGLVFLIPMAGSLRRAR-------LTP 53
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ G+ + + YA+ + +++PV ++FL E+L +I
Sbjct: 54 RLWGLYAGRGAVHTAGVILWFYAMTQIPLAEVTAMNYLSPVYVTLGAALFLGEKLAFRRI 113
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A + ++ LI+ + IA+ ++A F + + G V+A+ ++
Sbjct: 114 SAIAVALIGALIILRPGFREVSPGHIAMLFTAVSFGASYLIAKFTVGSNSPAVVVAMLSV 173
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F + + + + L G + + A ++ + + +
Sbjct: 174 FVTLGLAPFALAVWVTPTLTELAILFGVACFATAGHYAMTLAFAAAPVTVTQPVTFLQLV 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + +P+D G+++ A+ K
Sbjct: 234 WATLLGALVFAEPVDIWVVSGGGLILAAVSFISWREARIKKK 275
>gi|254169029|ref|ZP_04875867.1| Integral membrane protein DUF6 [Aciduliprofundum boonei T469]
gi|197621999|gb|EDY34576.1| Integral membrane protein DUF6 [Aciduliprofundum boonei T469]
Length = 283
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 88/275 (32%), Gaps = 10/275 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A L+G L+ + + + + ++ RV+++ +F ++Y G + K L
Sbjct: 11 GAVFLFGFAGLFGKIIS-LPAMMIVLGRVVFAAIFLFLVMIYRKEGFKVPKRDL------ 63
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
L +LAVHW F Y++ + +Y P+ + L KE++ + +I
Sbjct: 64 LYLPVLGLLLAVHWSLFFYSIQLSTVAIGLITYSTFPIFTAVLEPWIFKEKIRKMNVILP 123
Query: 152 LLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
++ + +L + + + I + + +
Sbjct: 124 IITFIGILFIVPNLNVQNNVTQGVIWGTLSGLTFSFLTIINRKYVQEYSSITLAFYQDSF 183
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + ++ + +F ++R T I+ PL
Sbjct: 184 AAIFLLPILFLFNVSPSFSDLGYVVLLGIVFTGLAHTLFISSLRRINARTASIIASLEPL 243
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I+ + L + I IV+ L
Sbjct: 244 YGIILAFIFLNEVPAIHTAIGGAIVLATSFYATLN 278
>gi|59713213|ref|YP_205988.1| drug/metabolite exporter family protein [Vibrio fischeri ES114]
gi|59481461|gb|AAW87100.1| transporter, drug/metabolite exporter family [Vibrio fischeri
ES114]
Length = 285
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 88/281 (31%), Gaps = 16/281 (5%)
Query: 30 VFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+F + + + + +++ + V E+++ R L SL + + K
Sbjct: 1 MFLSALGFALMSACVKYVSNYGIPVFEIVAARALVSLIISYADV--------KRKGISIW 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L+ + YA+ T + +V P+ + LG +FLKE +
Sbjct: 53 GNNKPLLLARGAVGTTALMCVYYAVTTLPLAEATILQYVHPIFTALLGVLFLKEHIQKST 112
Query: 148 IIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+I + L +M S + A + + V
Sbjct: 113 MICIAFCLAGLFVMVQPSMDSGSTSELPIFSIAVALCGALGSSIAYVIVRKLSQTEDSSV 172
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ L + + F ++ T+ LI G+ + ++
Sbjct: 173 IIFYFPLVALPISTVLIWNDFVWPSLFLTMILILIGIFTQIGQYGLTKAMQTQAAGKASA 232
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + + V+I + + G++V ++ +
Sbjct: 233 YSYVQIVFSALLGVWIFNEIPSIWTYLGGGLIVTGALINVF 273
Score = 39.5 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 24/62 (38%)
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
Y + L+ I++Y P+ + V LK+ I I + + V + P
Sbjct: 70 LMCVYYAVTTLPLAEATILQYVHPIFTALLGVLFLKEHIQKSTMICIAFCLAGLFVMVQP 129
Query: 304 TV 305
++
Sbjct: 130 SM 131
>gi|256390636|ref|YP_003112200.1| hypothetical protein Caci_1436 [Catenulispora acidiphila DSM 44928]
gi|256356862|gb|ACU70359.1| protein of unknown function DUF6 transmembrane [Catenulispora
acidiphila DSM 44928]
Length = 331
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 20/303 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
++ + T G LF + + +G + + L S L+ + R++ ++ +
Sbjct: 1 MTSPVSVNRTTAGVLFGVTSSVAFGAGGPFAKALIAAGFSPLQAVWIRLVGTVVVLVALC 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ L ++ + +A + A + F PV+
Sbjct: 61 LVLRRPGQLATMA---RHKWPIVTYGLVAVAACQALYFVAASRLPVGIAILLEFTGPVLV 117
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFAR 185
V + ++ I + +L L ++ I L++ A +A F
Sbjct: 118 VAWEKLVRHAHVSRESAIGVGVAMLGLAVVVQIWSGVHLDAIGLMAGLGAAAGNATYFLL 177
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHF---------FLGNIPDTLFLIGY 236
GS + + + + + V TL
Sbjct: 178 IDRLAGSVDPLTLTTGGMIVGMVVLVPLAAPWSAPWHILGQSVPMGSHHLPGWTLAAFIV 237
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ + + I+R + Y P + + L + + + IV+
Sbjct: 238 LISTILSYLSGAAAIQRLNAPVAAGLAYVEPASATIVAWAALGERLSLTQIAGGVIVLAG 297
Query: 297 MVV 299
+
Sbjct: 298 AFL 300
>gi|76787310|ref|YP_330280.1| hypothetical protein SAK_1678 [Streptococcus agalactiae A909]
gi|77406585|ref|ZP_00783633.1| membrane protein [Streptococcus agalactiae H36B]
gi|77408257|ref|ZP_00785000.1| membrane protein [Streptococcus agalactiae COH1]
gi|77411892|ref|ZP_00788224.1| membrane protein [Streptococcus agalactiae CJB111]
gi|76562367|gb|ABA44951.1| integral membrane protein [Streptococcus agalactiae A909]
gi|77162052|gb|EAO73031.1| membrane protein [Streptococcus agalactiae CJB111]
gi|77173115|gb|EAO76241.1| membrane protein [Streptococcus agalactiae COH1]
gi|77174810|gb|EAO77631.1| membrane protein [Streptococcus agalactiae H36B]
Length = 295
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 101/296 (34%), Gaps = 10/296 (3%)
Query: 29 FVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
A + WGI+ + Q+L V V + S R+L + + ++ L+ +
Sbjct: 1 MTLAAGLAWGISGISGQYLMSHGVHVNLLTSLRLLITGIFLL-SLARSKQKEHLVAAWKQ 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L+FS L ++ F+ A+ + ++ P++ + + + ++R
Sbjct: 60 PKFLKQVLLFSIFGLVLNQYAFLRAIHLTNAGTATVLQYMAPILILSIVCILNRQRPTSF 119
Query: 147 QIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+IIA + IL ++ H L + + + + + G I
Sbjct: 120 EIIAIAMAILGTYMIATHGKLGSLAITPKGLMWGLGSAITYSIYILLPVKLIHEWGSTIV 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + + ++ G+ F + F G+
Sbjct: 180 IGSGMFIGGILFSLVTKAWQYPLQINVMSILAYIGIIGIGTIFAYTFFLKGVSIVGAVKG 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ P+ + +V +L + + + + +A+ + +I K K +
Sbjct: 240 SLLASVEPVSSVFLTVLVLGEIFYPIDLLGMLFIFLAVTLISYKDLIALKKMKRVR 295
>gi|285019736|ref|YP_003377447.1| hypothetical protein XALc_2976 [Xanthomonas albilineans GPE PC73]
gi|283474954|emb|CBA17453.1| hypothetical protein XALc_2976 [Xanthomonas albilineans]
Length = 291
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 94/293 (32%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F Y + I+ + + LE + EV+ + + F
Sbjct: 2 IKGVLLGFACYAAYSISDAFVKGLEGTLPAYEVVFF-----GALLMLTALPFLKKPGDRW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + A A + A F+ P+ L + LKE
Sbjct: 57 REVVVAQRPSIWLLRAFTGAAGNLSAVTAFTLLPMAEAFALIFLMPIFVTVLSVLLLKEE 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++ + +A ++ + +LI+ L +A A I + + + +
Sbjct: 117 VHWRRWLAVIVGFIGVLIVLRPGFRHLSEGHVAAIVCGLVGAVSVISLRMAGPGEKRLTL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
++ G HF + LIGYGLL A +S V
Sbjct: 177 YGASVFGPLLMGGLLMLPHFVWPRLTQWGLLIGYGLLAGLAAIFMMRASHAAPVSAVAPT 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+Y+ L I ++ +D + +++ A + L+ + + K
Sbjct: 237 QYSQMLWAIGFGYWVFHDRLDWPMAVGIALILGAGLFTLVREEKVTQWWRRTK 289
>gi|229171365|ref|ZP_04298950.1| Transporter, drug/metabolite exporter [Bacillus cereus MM3]
gi|228612069|gb|EEK69306.1| Transporter, drug/metabolite exporter [Bacillus cereus MM3]
Length = 310
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNNRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
S ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 SFGQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + LI + + F +
Sbjct: 181 SLIKECGTTVVIGWGMLIGGIALLICNRSFEWNQLSQTFTPKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|225387183|ref|ZP_03756947.1| hypothetical protein CLOSTASPAR_00935 [Clostridium asparagiforme
DSM 15981]
gi|225046731|gb|EEG56977.1| hypothetical protein CLOSTASPAR_00935 [Clostridium asparagiforme
DSM 15981]
Length = 304
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 82/300 (27%), Gaps = 8/300 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+E G + + + + ++ + + L+ + R L + +F +
Sbjct: 11 REKMIRDRHKGIACIVLSALCFAFMNVFIRAAGDLPSLQKVFFRNLIAFFAAWFVM---- 66
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +LV + V YA+ S ++P ++
Sbjct: 67 --RRKHVAFSGKKSNLLLLVCRSMFGLVGMMGNFYAVDHLVLADASMLNKMSPFFAILFS 124
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKE L+ Q A + L++ +G + S A V A G
Sbjct: 125 MLILKESLSFKQAAAVVGAFAGSLLIIKPTGFDIQSPAAVVGLLGGMGAGIAYTFVRILG 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKR 253
E + + G+ + +
Sbjct: 185 KRGEAGPFIVCFFSGFSTLMLLPVFILNYHPMTAWQLGSLLMAGVAATGGQFGITAAYCY 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
A + + +Y+ + + F+ Q D + +G++ V K +
Sbjct: 245 APARDISVYDYSQIVFSAILGFFLFGQLPDVYSWMGYGVICAMAVWMFFMERNGGAKARA 304
>gi|91224169|ref|ZP_01259432.1| hypothetical protein V12G01_02760 [Vibrio alginolyticus 12G01]
gi|269968636|ref|ZP_06182634.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91191080|gb|EAS77346.1| hypothetical protein V12G01_02760 [Vibrio alginolyticus 12G01]
gi|269826759|gb|EEZ81095.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 297
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 85/282 (30%), Gaps = 1/282 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ + VY L+L T
Sbjct: 13 AAIWGGSFLFMRVAANTFGPAYLIEFRVTFAAVALLLIAVYLKKKLTLTAHTKHFFIIGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L + + A T+ + + + K L L I +
Sbjct: 73 FNSAVPFLLFAYAAQTLNASTLAILNSTAPIWGALVGFVWYRSPLTAKSVLGMLIGIGGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+++ L T+ L A + +Y A F A+ +V+
Sbjct: 133 AVLVGLDTSTIGEEAMLPIAASLMASFSYGIATNYTKNAPQVPAFDNAHGSMWAAVIWVL 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ + + + F + ++ + ++ + + P+ I+
Sbjct: 193 PLLPFLPMRAEPSHFEWSSVVTLGVVCTGFAYLLYFRLVSDIGPASALTVTFLVPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+L +P+ + I +V+ ++ + + +
Sbjct: 253 WGYLVLDEPVGSNTIIGTILVLSGTMLVTGFSPTAMLAKRKR 294
Score = 36.0 bits (81), Expect = 7.7, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 41/131 (31%)
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
+ + + + + V ++ + + + +
Sbjct: 6 FFRLLCLAAIWGGSFLFMRVAANTFGPAYLIEFRVTFAAVALLLIAVYLKKKLTLTAHTK 65
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
F I ++ F +F+Y + ST+ I+ TAP+ + + P+ +
Sbjct: 66 HFFIIGLFNSAVPFLLFAYAAQTLNASTLAILNSTAPIWGALVGFVWYRSPLTAKSVLGM 125
Query: 291 GIVVIAMVVYL 301
I + + V +
Sbjct: 126 LIGIGGVAVLV 136
>gi|294666124|ref|ZP_06731381.1| drug/metabolite transporter superfamily protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292604091|gb|EFF47485.1| drug/metabolite transporter superfamily protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 291
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 97/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L F Y + I+ + + LE + + VL+ + V F
Sbjct: 2 LKGVLLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPDDQLR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L +FLKE +
Sbjct: 58 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEV 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 118 HWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVIALRMAGHSEKRLTLY 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V G F + L GYGLL Y + A +S V +
Sbjct: 178 GAGVIGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 289
>gi|222087746|ref|YP_002546283.1| multidrug ABC transporter [Agrobacterium radiobacter K84]
gi|221725194|gb|ACM28350.1| multidrug ABC transporter [Agrobacterium radiobacter K84]
Length = 290
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 98/292 (33%), Gaps = 7/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P G L Y+L+ + L + V +V+ R F
Sbjct: 1 MKNPISYGILLTAFGYMLFTAHDSAVKLLVVTIPVWQVLFLRS------CAILAGCFVYE 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + V ++ + +L + W + A Q + Y+ P++ L ++
Sbjct: 55 GPSLVRKVARSPVVKPMIVRSMLLLIAWISYYSAAKYLQLAEVTTLYYAAPIVGTILATI 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+E++ + +A + ++I + G+ + +A +A + + +
Sbjct: 115 VLREKVTVARWMAVGVGFCGVVIASNPVGLSISWPVYLALQAAVLWATGMVLLRKTALHE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+A+ + ++ G H+ + + L G+ G+++A +S
Sbjct: 175 KSHIQMAVSNIMLILMTGTMAILHWKTPTAYELILLCATGIFAGIGQLALFEGMRQAPVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ EYT+ + I + +++ A ++ ++
Sbjct: 235 VLAPFEYTSLVWAFGLGYLIWGDVPKINTFMGAILILSAGLIIIVSERRRQR 286
>gi|154497208|ref|ZP_02035904.1| hypothetical protein BACCAP_01501 [Bacteroides capillosus ATCC
29799]
gi|150273607|gb|EDN00735.1| hypothetical protein BACCAP_01501 [Bacteroides capillosus ATCC
29799]
Length = 300
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/292 (16%), Positives = 104/292 (35%), Gaps = 11/292 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++G L V A L GI P + L+ + + ++ + L L + L
Sbjct: 2 LIGILSVAGAATLLGIMPTLQKQVLLDGLHMNSLMFYSNLIILLVSAAMALAKGKSLRAK 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L A+G++ T ++ L+ +T F+ P + + ++
Sbjct: 62 PAQLIQALAMGVVGMLITSFLLNTS-----LVYLPVGMTIMLNFLYPTVVCVVMGTVFRQ 116
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----GFF 197
+ LQ++A + I+ ++ + G + + SA+ + I
Sbjct: 117 GFSKLQVVAIVCSIVGMVFLAGEVGNVEIIGILTALASAFTYGAYLIANEKGPANELSIE 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ +A+P + + G LF++G GL N + + YGI R S
Sbjct: 177 AKLFYVALPGTLFWGVVAPATGTMQLPAGAGGWLFVLGAGLFNVGGYFLMMYGISRMGAS 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T + P++ +V P+ I +V+ ++ + + +
Sbjct: 237 TAAFVSMLEPIVSVVFGTIWFHDPVTQGVVIGGIMVLASIFLIAVDGNRKAK 288
>gi|294500106|ref|YP_003563806.1| integral membrane protein [Bacillus megaterium QM B1551]
gi|294350043|gb|ADE70372.1| integral membrane protein (DUF6) [Bacillus megaterium QM B1551]
Length = 297
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 90/288 (31%), Gaps = 13/288 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + WG++ ++ + L + +I+ R L +
Sbjct: 9 MMMIGVNVFWGMSYVFMKMGLSSLGSFTIIALRCLIAFFIAGLFFY--------KPLRQI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K +G +L + F + + F +T + L +K+ +
Sbjct: 61 TRKTIGSSAILGFLLFSVFSFVTFGVSMTSASNAGFLVSLTVIFVPLLNCFLVKKLPSWP 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----GFFIEMCV 202
+ + + + ++TL + + + +A C+A G+ + +
Sbjct: 121 IGLGVITTLTGIGVLTLKHSFHMNAGDLLCIGTALCYAIHITLTGTFTKNENPIALGILQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L LF + + L L ++ F + + + G++
Sbjct: 181 LGFAGLFALTCSFLFEHPSIPTTLSSWIAILGLGVLCSAIGFICQAIAQRYTTPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T P+ + +V L + I IVV +++ L + +
Sbjct: 241 FATEPIFAALFAVLFLHELFTLKELIGSVIVVAGILIAQLDNFLLKKR 288
>gi|126736172|ref|ZP_01751915.1| hypothetical protein RCCS2_10555 [Roseobacter sp. CCS2]
gi|126714338|gb|EBA11206.1| hypothetical protein RCCS2_10555 [Roseobacter sp. CCS2]
Length = 306
Score = 74.2 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 97/303 (32%), Gaps = 13/303 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G +F + ++ + V + + R ++LP + + +
Sbjct: 1 MQPLRGIIFKIMSVCMFMGMASLVKAASVDVPPGQAVFFRSFFALPIILGWLAIRHELRT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + G L + + P++ V ++FL
Sbjct: 61 GWKTK-----NPMGHFWRGLVGTSAMGLGFTGLGLLPLPEVTAIGYAAPLLVVVFAAMFL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGS 192
E + ++ A L ++ +LI+ A+ V A A + V
Sbjct: 116 NENVRAFRLSAVALGMVGVLIVLSPRLSVGASLNTSETLGAVVVLMGAVLAALAQVFVRK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + V F+ + + + L LI GLL + + +
Sbjct: 176 LVATETTAAIVFWFTITSSVMALFTLPWGWVVPSWQVALMLIMAGLLGGVGQILLTSSYR 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A S V +YT+ +L ++ FI + I IV+ A V+ + +
Sbjct: 236 YADASLVAPFDYTSMILALLIGYFIFDEVPTGTMLIGAAIVIAAGVLIIWRERALGLQRA 295
Query: 313 TKK 315
++
Sbjct: 296 QQR 298
>gi|319795294|ref|YP_004156934.1| hypothetical protein Varpa_4660 [Variovorax paradoxus EPS]
gi|315597757|gb|ADU38823.1| protein of unknown function DUF6 transmembrane [Variovorax
paradoxus EPS]
Length = 325
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 78/300 (26%), Gaps = 8/300 (2%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFA 70
+ S+ S + G V A + T+ V +L + R +
Sbjct: 24 QQTSRSKESERILAGIGLVLVAVACFATLDTATKASTAGVPILMGVWFRYAFQAVATTAV 83
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
++ G L + +L V +L + + P++
Sbjct: 84 LLPLHGTALLRTRHPRYQLLR------GALLLVSSTLAFLSLRYMPLAEFTSIVLIAPLV 137
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L + LKE ++ L+ + L++ G + A +
Sbjct: 138 ITLLAATTLKEYVSPLRWALVAGGFIGTLVILRPGGEAFSWAILLPIGLVLTNAWFQVLT 197
Query: 191 GSSEGFFIE-MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ ++ + L + L G + + I
Sbjct: 198 SKLAQTENPLTMHFYTGWVGALIASLALPFVWTALPSWEWWALLCLMGFMGTVGHFILIL 257
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+RA ST+ Y ++ + Q D I ++ + TV
Sbjct: 258 AYQRAPASTLTPYLYAQIAFAMLGGWLVFSQVPDRYSLIGISMIAVCGAAGAWLTVRERR 317
>gi|320012044|gb|ADW06894.1| protein of unknown function DUF6 transmembrane [Streptomyces
flavogriseus ATCC 33331]
Length = 344
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/305 (9%), Positives = 71/305 (23%), Gaps = 17/305 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
AS G + +G + + + L + L V+ RV + +
Sbjct: 3 ASQKRSAGLGLALASAFAFGGSGVAAKPLIEAGLDPLHVVWLRVTGAALVMLPVAWRHRR 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI----SV 132
+ L + A A + L + + +
Sbjct: 63 LVRERPVLLAGFGLFAVAGVQAFYFASISRIPVGVALLIEYLAPALVLGWVRFVQRRPVT 122
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+V + + L + + L + L + + + A S
Sbjct: 123 RAAAVGVVLAVGGLACVVEVWAGLGFDAVGLLLALGAACCQVGYFVLSDQGAGHGETADS 182
Query: 193 SEGFFI-----------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ + + E L L
Sbjct: 183 EPPHPVGVIAYGLLAGAVVLTVVAGPWAMDWAVLGGSAEMNGHDVPAWLLLCWIVLLATV 242
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ G++ ++ V + +L + + + + G+V+I +
Sbjct: 243 LAYATGVVSVRLLSPQVAGVVACLEAVVATVLAWVLLGEHLSPPQLVGGGVVLIGAFIAQ 302
Query: 302 LPTVI 306
Sbjct: 303 SSAPR 307
>gi|256159353|ref|ZP_05457136.1| hypothetical protein BcetM4_10408 [Brucella ceti M490/95/1]
gi|256254650|ref|ZP_05460186.1| hypothetical protein BcetB_10215 [Brucella ceti B1/94]
Length = 338
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 97/294 (32%), Gaps = 14/294 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 34 EMNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWR 88
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 89 GQLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAIL 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 149 HEVVRFYRWSAVLIGLFGVMIIIWPRLPLFSAGSVGRDEAVGALAALGAAVMSAVAMMLV 208
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ ++ V S + + N L+G G + +
Sbjct: 209 RRLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTEC 268
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 269 YRHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 322
>gi|239503280|ref|ZP_04662590.1| hypothetical protein AbauAB_13298 [Acinetobacter baumannii AB900]
Length = 300
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 88/290 (30%), Gaps = 1/290 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASVFLLLLVIKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + VF +
Sbjct: 69 PLTWKDAPALGVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALVFKEHI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 RFKQWLCILLGLCGAVLVVSGDHGFGMPSPYSLLIVLAAIAWGIYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ L + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTLPLLFYSAHLPSEILHATWQANMSVVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVIFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRT 298
>gi|255505479|ref|ZP_05346358.3| integral membrane domain protein [Bryantella formatexigens DSM
14469]
gi|255267476|gb|EET60681.1| integral membrane domain protein [Bryantella formatexigens DSM
14469]
Length = 282
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 77/284 (27%), Gaps = 8/284 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + + + + ++ ++ R L + IV L + +++
Sbjct: 1 MLMIILSAFCFACMNVCVRLSGELPSVQKSFFRNLVAAVFAGIVIVKNHTSLRIERESRL 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ YA+ S ++P ++ + LKE++ H+
Sbjct: 61 PLAMRCIFGTMGI------LCNFYAVDHLMVADASILNKLSPFFAILFSFLLLKEKITHI 114
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
Q L L + + + A + G + +
Sbjct: 115 QAACVALAFAGCLFVVKPGFQNASFVPALIGVCGGLGAGIAYTMVRKLGTQGVKGPVIVF 174
Query: 207 ALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
F + L+ GL + + A + I +Y
Sbjct: 175 YFSLFSCLIVIPWMAAVFVPMSAGQIGILLLAGLFAAGGQFSITAAYTYAPARKISIYDY 234
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + I ++ D I +G+++ A L
Sbjct: 235 SQIIFATILGFAIFREIPDAYSFIGYGLIIAASFFMFLYNRKQQ 278
>gi|171779366|ref|ZP_02920330.1| hypothetical protein STRINF_01211 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281983|gb|EDT47414.1| hypothetical protein STRINF_01211 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 297
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 85/280 (30%), Gaps = 15/280 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F A ++ + L + + +RVL+S+P + + +
Sbjct: 12 IFLIFLAICFLATGGIFVK-LCPLPPINTGFYRVLFSIPMLMPFL-------KKSELQAL 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N K + +V + LA + + + +TP + + KE++
Sbjct: 64 NRKQIATIVLAGAFLAGDLTLWNSSFSYTSVANANVLVNLTPFTVIPVSYFLFKEKMTPK 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIPVGSSEGFFIE 199
+ L+ ++ +L++ + + + + A S I
Sbjct: 124 FLFGGLVTLIGVLVLMSNKVSMSPDRLLGDSLSLGSSVFYAMFMITVYKLRDSVTSTIIM 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L F+ G + L L + +Y + +
Sbjct: 184 FISAFGTLLVLATVIFFTEGFYVPQNFGELWPLLALALLSQILGQGLLAYCLGKVNACLS 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + P++ + + I + ++ I I + + +
Sbjct: 244 SLITLSQPVVAALYAWVIFNENLNLQTVIAILITLTGVYL 283
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 36/129 (27%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
I + + A CF + F N
Sbjct: 11 YIFLIFLAICFLATGGIFVKLCPLPPINTGFYRVLFSIPMLMPFLKKSELQALNRKQIAT 70
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
++ G + +++ ++ ++ P +I S F+ K+ + +
Sbjct: 71 IVLAGAFLAGDLTLWNSSFSYTSVANANVLVNLTPFTVIPVSYFLFKEKMTPKFLFGGLV 130
Query: 293 VVIAMVVYL 301
+I ++V +
Sbjct: 131 TLIGVLVLM 139
>gi|110668933|ref|YP_658744.1| transporter of the drug/metabolite transporter (DMT) superfamily
[Haloquadratum walsbyi DSM 16790]
gi|109626680|emb|CAJ53146.1| transporter of the drug/metabolite transporter (DMT) superfamily
[Haloquadratum walsbyi DSM 16790]
Length = 359
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 81/294 (27%), Gaps = 10/294 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +L+G T + + L L ++ R +
Sbjct: 1 MSARRAFGLFIASAVLFGGTFVGAKAGLPYFPPLTFVAIRFDIGALVLAGYA-AHKLSFE 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ + + I + FI G + VF
Sbjct: 60 QLRPRTRGDIIAILATGVFVIGLTNALIFIGQQYITSGVAAIIMSLNPILTPVFAAFALS 119
Query: 140 KERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + +I + ++ + + G+P++ A V+ R + P
Sbjct: 120 DEPITRRGVIGIVAGLIGVGLVANPDPSAFVGTIGLPIIFGAAVVSALGAVVIRWSTPTM 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS + +A + + L + + + I
Sbjct: 180 SSAARTVWGVPIAAVVTHLLAVMTGESMAAISVTPTAVIALLYVGIGSGAIAYLSYFALI 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ Y P++ + IL + I T+ I F ++ ++ ++
Sbjct: 240 DTVGATRANLLFYLTPVVSALGGWIILNESISTLTIIGFVVIFGGFLILGGDSI 293
>gi|15963933|ref|NP_384286.1| hypothetical protein SMc02855 [Sinorhizobium meliloti 1021]
gi|307306345|ref|ZP_07586089.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
gi|307319232|ref|ZP_07598661.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|15073108|emb|CAC41567.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306895068|gb|EFN25825.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|306902187|gb|EFN32784.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
Length = 307
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 84/289 (29%), Gaps = 5/289 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +F A +++ I ++ L + + V R GG + T
Sbjct: 19 GYVFALLAIVIFSIQDGISKHLGAIYPPVFVAMIRYWAFAGFAAAIAARAPGGFAATAVT 78
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K + + +L V I + + TP+ L L ER+
Sbjct: 79 RKPL----IQLLRGVLLPVQIVVVITSFTIVGLAHSQAILAATPLFVALLSMPLLGERVG 134
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A + +L +L++ + +A FA I + M
Sbjct: 135 WRRWSAIAVGLLGVLLILRPEDGSFDLNFLLPLAAAVMFAFYVITTRLASREDSAMTSFF 194
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ G + + D ++++ + + + V + Y
Sbjct: 195 YTGIVGAFAISLVGPFFWATLSGADWVWMVLLCITGTSSHYFLIRAYDMLDAAAVQPLTY 254
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + V I + + T I +VV A + L + +
Sbjct: 255 LQLVFASIMGVTIFGETLTTGMIIGSVLVVAAGIFTLWREHVVGRQKSR 303
>gi|254254320|ref|ZP_04947637.1| hypothetical protein BDAG_03615 [Burkholderia dolosa AUO158]
gi|124898965|gb|EAY70808.1| hypothetical protein BDAG_03615 [Burkholderia dolosa AUO158]
Length = 329
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 84/290 (28%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P +F +
Sbjct: 12 KTRLIGYLYLAAAMTGVGSTVIASRIAADGLPPFAATALRFLIATPLLFALMRAQRMRWP 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ A+ ++V +A + + P +S + +V L
Sbjct: 72 RISA----RDALLLVVQAAAGGVGYTVLLLCGTKLSSPVDAGVMLGTLPAMSTLIAAVVL 127
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIP 189
+ER IAA L +L++T G + S+ + + + +
Sbjct: 128 RERQTPRDWIAAALATAGVLLVTFAPGHAMPSIRTLAGDALVLAAVGCEAVFILLNRRLA 187
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ L + + +
Sbjct: 188 APLAPLALSTAMSGLGFVLALGPAAFEWRALAAGWTIGAVAAIAYYALVPTVLGYLCWYA 247
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + R +VV M++
Sbjct: 248 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLGGTRLPGIALVVAGMLI 297
>gi|293376520|ref|ZP_06622748.1| putative membrane protein [Turicibacter sanguinis PC909]
gi|292644746|gb|EFF62828.1| putative membrane protein [Turicibacter sanguinis PC909]
Length = 286
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/288 (16%), Positives = 111/288 (38%), Gaps = 12/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L + L+G TP+ ++ + + + +R L+SLP ++ + Y L
Sbjct: 1 MKRNQGVLLTILSAFLFGFTPILAKWTYSGGSNAISLTFYRALFSLPVLYGILKYRKVSL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + VG+L + T + ++ + + + +FV P V ++
Sbjct: 61 KVTKSQWIHLLIVGILGQTVTTITLYATYD-----YLSVGMATTLHFVYPAFVVLAAVLY 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS-----S 193
KE+ ++I+ +L ++ +L SG L S +A + +
Sbjct: 116 FKEKWTRAKVISIILAMIGMLCFIDLSGHISLYGVFLALVSGMTYAFFILYIDKSGLKEL 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ F + + + + V+ + L I L LI L++ F + GIK
Sbjct: 176 DSFKLTFYINLVVSAAVFVYGMGTHSLMINLTPIAWGLTLIISLLVSVFAVALLQIGIKL 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ I+ P+ +V + +L + + ++ +++++
Sbjct: 236 IGSTKASILCLFEPITSVVFGLILLHEDLTILKLTGCILILLSAYAIS 283
>gi|225571039|ref|ZP_03780056.1| hypothetical protein CLOHYLEM_07137 [Clostridium hylemonae DSM
15053]
gi|225160120|gb|EEG72739.1| hypothetical protein CLOHYLEM_07137 [Clostridium hylemonae DSM
15053]
Length = 306
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 90/294 (30%), Gaps = 20/294 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L F +WG T + T+ L+ + +E++ R L ++
Sbjct: 2 TEKNVSRGHLAAFITIFIWGTTFISTKVLLKSFTPIEILFIRFLIGYAALWCV------- 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ L+ + +++ +L Q P + L +
Sbjct: 55 RPKFMPLRGRKQEGIFLLAGLCGICLYYLLENISLTFTQASNVGVIISTAPFFTAILTKL 114
Query: 138 --FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFAR 185
KE+L + + + + +++ G L+ I +S
Sbjct: 115 VSREKEQLGLPFFLGFIAAMAGICLISFSDGGASLNPTGDLLALLAAFIWACYSVLTKKI 174
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ E + + + ++GF L + L ++ F
Sbjct: 175 SGYGYSTIETTRRVFFYGIMFMVPVMFFSGFRPDMKALLVPVNLGNILFLGLGASALCFV 234
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ ++ + Y P++ + +SV ILK+ I I + + + +
Sbjct: 235 TWNAAVRILGAVKTSVYIYLVPVITVTASVLILKEQITLKACIGMLLTLAGLWI 288
>gi|170755315|ref|YP_001780790.1| hypothetical protein CLD_3402 [Clostridium botulinum B1 str. Okra]
gi|169120527|gb|ACA44363.1| UAA transporter family [Clostridium botulinum B1 str. Okra]
Length = 293
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + +FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAVLCWASYGVFSKKVMPRYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 MTLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYISILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ I+ S IL + I + + +++ + +
Sbjct: 243 IGPSKTSIFVNLVPISSIILSSMILGEKITIITLLSTALIIAGVYI 288
Score = 39.9 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 39/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + L
Sbjct: 4 SRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|168178584|ref|ZP_02613248.1| putative membrane protein [Clostridium botulinum NCTC 2916]
gi|182670503|gb|EDT82477.1| putative membrane protein [Clostridium botulinum NCTC 2916]
Length = 293
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + + + R L + +FF I+ + L
Sbjct: 7 YFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKL---- 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K L + + FF A +S P+I+ L +FLK++L+
Sbjct: 63 KKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSS 122
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
II +L +L+ + G L+ +A+ S F++K +P S
Sbjct: 123 KGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAVLCWASYGVFSKKVMPRYSP 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V + L + + + IK+
Sbjct: 183 MTLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYISILYMSIFASVIGYLVQQISIKQ 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ I+ S IL + I + + +++ + +
Sbjct: 243 IGPSKTSIFVNLVPIFSIILSSIILGEKITIITLLSTALIIAGVYI 288
Score = 39.9 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 39/143 (27%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ ++ + F + F + I L + L
Sbjct: 4 SRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIATLVLFFIIMIKEKNIYKLK 63
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+FL + F + ++ + P++ + SV LK + +
Sbjct: 64 KEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASNPIITCILSVIFLKDKLSSK 123
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +++ + I +
Sbjct: 124 GIIGIILSFTGVLLTITNGAIAN 146
>gi|218781919|ref|YP_002433237.1| hypothetical protein Dalk_4084 [Desulfatibacillum alkenivorans
AK-01]
gi|218763303|gb|ACL05769.1| protein of unknown function DUF6 transmembrane [Desulfatibacillum
alkenivorans AK-01]
Length = 310
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 86/296 (29%), Gaps = 17/296 (5%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG T + + L V L R + + K + V
Sbjct: 17 ALFWGGTFVAGRSLAGKVGPLSAAFLRFAMASVFLTVIAW----RKEERLSFPKGRQLVA 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L+ T ++ + FF L + + P+I L ++ KE+L + + L
Sbjct: 73 ILLLGLTGISFYNFFFFSGLHHIEAGRAAVIIANNPIILALLSALVFKEKLTPQKSMGIL 132
Query: 153 LIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L + +++ G + +A AV + + +
Sbjct: 133 LSVSGAVVVITKGHPLSLFNEGVGPGEMLIAGAVFSWVAYSMIGKVVMANLSPLLSVTYS 192
Query: 203 LAIPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + F G + F + GIK +
Sbjct: 193 VIAGTVMLAIPAGMEGVFSSMFSYGPWQWFSLFYLAFFGTALGFVFYYEGIKTIGPTRAA 252
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ P+ ++S IL + + +V + + + + +++ +
Sbjct: 253 LFINFVPVSAVLSGFVILGEALTLSLLAGLALVSSGVYLTNVQNLFRRHDKRSENN 308
>gi|89891877|ref|ZP_01203378.1| putative transporter, drug/metabolite exporter family
[Flavobacteria bacterium BBFL7]
gi|89515782|gb|EAS18583.1| putative transporter, drug/metabolite exporter family
[Flavobacteria bacterium BBFL7]
Length = 287
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 99/285 (34%), Gaps = 8/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+F+ + + + + ++L+ S + R L +L +++ L K
Sbjct: 10 KKAIIFMLLSTLAFAVMNGVVKYLDGFSAYVKVFFRSLGTLIFTMPYLIFKKIPLLGNKR 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
T +L+ I AV F +L +++PV + ++LKE +
Sbjct: 70 T--------LLIARGVIGAVSLILFFMSLKYLPVGTAVTLRYMSPVFAAIFAVIWLKETI 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q + L+ + + ++ G + + V SA C + + M ++
Sbjct: 122 KPWQWMFFLMALAGVFVLQGFDGTSSVIGLLLVLTSALCMGLVFVVISKIGKQDHPMVII 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + G + + L L+G G++ + + A + V ++
Sbjct: 182 NYFMIIGTILGGILALNDWKTPVGNEWLLLLGLGVVGFIGQLFMTKSFQIASTNQVAPLK 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y + ++ V + + +V+ +V+ +L S
Sbjct: 242 YLEVIFTVIIGVLWFLEVYTLWSVLGIALVITGLVLNILYKSKQS 286
>gi|33598101|ref|NP_885744.1| hypothetical protein BPP3585 [Bordetella parapertussis 12822]
gi|33602994|ref|NP_890554.1| hypothetical protein BB4020 [Bordetella bronchiseptica RB50]
gi|33566659|emb|CAE38869.1| putative membrane protein [Bordetella parapertussis]
gi|33568625|emb|CAE34383.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 305
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 90/303 (29%), Gaps = 13/303 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S A+ P F A +W + + T+ ++ + +R W L G+ A
Sbjct: 6 SPPGAAQPQPRHMAFPLLATTIWSVNMVVTKMAADVIAPASIGFYR--WVLAGLLLAPFA 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G L P + V +A++ G A T + P+++V
Sbjct: 64 LPGVLRQWPQI--RPNLGRLAVLGGLGMALYQGLMYVAAGTTTATNMGIITAMVPLLTVV 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFAR 185
+GS+ L+ER I+ A++ + L I+ G + + AY
Sbjct: 122 VGSLVLRERPALTAILGAVVSLAGLGILLGEGNPLRLLALGGSRGDALMGLAALAYALYG 181
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + + F L L L + F
Sbjct: 182 VLLRKWPMSVGPWQSLFVQVLFGIVFQLPAFLLTPASPLNAQNIPLVLYAGIFPSLFAPF 241
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ G++ + I P++ + + L + + + + +
Sbjct: 242 LWMQGVRYLGPNRASIFLNLMPVVTVAIAAAFLGETPHLYHIAGGLMALAGVSLAQWRPA 301
Query: 306 INS 308
Sbjct: 302 RRR 304
>gi|325695073|gb|EGD36976.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis SK150]
gi|327462042|gb|EGF08371.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis SK1057]
Length = 353
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 77/294 (26%), Gaps = 6/294 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + A I + I +++ L ++ + S L + GV ++
Sbjct: 3 KSRKFIAVILALLAAIFYAINTPFSKVLLNKIPPTLMASFLYLGAGTGVGIMYLFHRKVE 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + + + + S V + + +
Sbjct: 63 EKYEKLNKADLPYTVGMIVLD--IAAPISLMIGINIGSASNASLLGNFEIVATTIIALLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSEG 195
KE++ IA I +S ++++ ++ S+
Sbjct: 121 FKEKVTSKLWIAIGFITISSIVLSFEGAESFKFSLGSLFVILATCCWGLENNCTRKISDK 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E+ +L + L+ + ++ +
Sbjct: 181 STYEIVLLKGFFSGSGAFIVALILGERIPEMKYIMAALLLGFVAYGLSIFMYIRAQRDLG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ AP + + + + + V I ++I V+ T++
Sbjct: 241 ATKTSAYYAVAPFVGTFLAFIVNGEKLTLVYFIGLVFMIIGSVIVAYDTMVKRH 294
Score = 38.0 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 53/173 (30%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G+LFV A WG+ T+ + S E++ + +S G F + + +K
Sbjct: 155 LGSLFVILATCCWGLENNCTRKISDKSTYEIVLLKGFFSGSGAFIVALILGERIPEMKYI 214
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + + + A T + + V + L +
Sbjct: 215 MAALLLGFVAYGLSIFMYIRAQRDLGATKTSAYYAVAPFVGTFLAFIVNGEKLTLVYFIG 274
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ +I +I+ ++ HS + + S
Sbjct: 275 LVFMIIGSVIVAYDTMVKRHSHSHSHIIVHTHDGKTHTHIITHEHEHSHFILE 327
>gi|301064166|ref|ZP_07204613.1| putative membrane protein [delta proteobacterium NaphS2]
gi|300441786|gb|EFK06104.1| putative membrane protein [delta proteobacterium NaphS2]
Length = 331
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/317 (10%), Positives = 95/317 (29%), Gaps = 13/317 (4%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVL 61
G+ + + ++ N G + A +++ L + + E+ R L
Sbjct: 9 TGSFDRSFQSLQTRANEMHRGFFGVSLLLMASLMFTAISLIVKITASTLGPWEIGFARFL 68
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
+ L A + + + +L+ + + + + ++ +
Sbjct: 69 FGLIFTLLAARAWKRFI--------WGQHRLLLIVRGIVSTISFVCLVSSIQMVPLSQAT 120
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS----GIPLLSLAIAVT 177
+F+ P+ + G ++ + + + L L+++ G L
Sbjct: 121 VLFFLFPMFAAIHGLWLNRDPVPFMDWVFILGGFCGALLVSWSGALSNGFEPGHLVALCG 180
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
A + + + + L ++ L
Sbjct: 181 AMTAGLALAMVRKLRTTNNPFTLYFYFCLIGTPCCLAPILRNHQWHLPSLVPMAALFVTA 240
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+L + + G+K T G++ T + + V L + + + +VV +
Sbjct: 241 ILGLAAQLMMNEGVKDVPAHTGGMLLSTQVIFASFAGVVFLGEAMTWRIFLGSVLVVGSG 300
Query: 298 VVYLLPTVINSGKNKTK 314
+ LP + +++ +
Sbjct: 301 ALLSLPKKGDHAQSRKQ 317
>gi|289664061|ref|ZP_06485642.1| hypothetical protein XcampvN_13590 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289667488|ref|ZP_06488563.1| hypothetical protein XcampmN_02972 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 291
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 97/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L F Y + I+ + + LE + + VL+ + V F
Sbjct: 2 LKGVLLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPDDQLR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L +FLKE +
Sbjct: 58 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEV 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 118 HWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVIALRMAGHSEKRLTLY 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V G F + L GYGLL Y + A +S V +
Sbjct: 178 GAGVIGPLVMGGIMMLPTFVWPTLYQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 289
>gi|256257149|ref|ZP_05462685.1| hypothetical protein Babob9C_07283 [Brucella abortus bv. 9 str.
C68]
gi|297247995|ref|ZP_06931713.1| hypothetical protein BAYG_00929 [Brucella abortus bv. 5 str. B3196]
gi|297175164|gb|EFH34511.1| hypothetical protein BAYG_00929 [Brucella abortus bv. 5 str. B3196]
Length = 338
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 97/294 (32%), Gaps = 14/294 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 34 EMNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWR 88
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 89 GQLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAIL 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 149 HEVVRFYRWSAVLIGLFGVMIIIWPRLTLFSAGSVGRDEAVGALAALGAAVMSAVAMMLV 208
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ ++ V S + + N L+G G + +
Sbjct: 209 RRLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTEC 268
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 269 YRHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 322
>gi|196034725|ref|ZP_03102133.1| permease, drug/metabolite transporter [Bacillus cereus W]
gi|196042374|ref|ZP_03109641.1| permease, drug/metabolite transporter [Bacillus cereus NVH0597-99]
gi|196047762|ref|ZP_03114954.1| permease, drug/metabolite transporter [Bacillus cereus 03BB108]
gi|225862324|ref|YP_002747702.1| permease, drug/metabolite transporter [Bacillus cereus 03BB102]
gi|195992768|gb|EDX56728.1| permease, drug/metabolite transporter [Bacillus cereus W]
gi|196021402|gb|EDX60117.1| permease, drug/metabolite transporter [Bacillus cereus 03BB108]
gi|196026791|gb|EDX65431.1| permease, drug/metabolite transporter [Bacillus cereus NVH0597-99]
gi|225790402|gb|ACO30619.1| permease, drug/metabolite transporter [Bacillus cereus 03BB102]
Length = 306
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+L++ FS
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLL----FSFKQLKRSVEH 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 60 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I L + +L++T+ S +++ A ++ + +
Sbjct: 120 NYWIGIALGGVGVLLITIPSSNVDQEVSLIGDILILLSTFLFAFYTILLKRPKQEQYLSN 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 180 KVFTTLTLIIGAVILLPFAMAETFYYGFPKIETWKTGFSVMYLVIGATILAYWFWNRALE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 240 TVSASVSGLYLNALPLISIVASIVLLDESVTWKIVIGGSLVLIGV 284
Score = 41.0 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L + ++++ +P
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLLFSFKQLKRSVEHKQVP 63
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I I
Sbjct: 64 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQLNYWI 123
Query: 289 VFGIVVIAMVVYLLPT 304
+ + +++ +P+
Sbjct: 124 GIALGGVGVLLITIPS 139
>gi|42779723|ref|NP_976970.1| EamA family protein [Bacillus cereus ATCC 10987]
gi|42735640|gb|AAS39578.1| transporter, EamA family [Bacillus cereus ATCC 10987]
Length = 308
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 98/294 (33%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ + + + FI + + F+ PV +
Sbjct: 65 QIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVFITIYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q++A + + + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F E LI + + F ++
Sbjct: 183 ECGTTLVIGWGMLIGGIALLICNRSFGWHELSQTFTTKTFSMLILIIISGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|255068497|ref|ZP_05320352.1| putative membrane protein [Neisseria sicca ATCC 29256]
gi|255047258|gb|EET42722.1| putative membrane protein [Neisseria sicca ATCC 29256]
Length = 303
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 86/283 (30%), Gaps = 8/283 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
MMG A +L ++++ L + +SV + + L + + +
Sbjct: 7 MMGIFLAVSAALLNATIGIFSKVLMEQGLSVQHIAFLKTLTGFVFISILLCRTGFTRQIA 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLT-----RQGFLTSFSYFVTPVISVFLGS 136
+ K + +L+ A + T + V ++ L S
Sbjct: 67 DISKKKEAILPLLLKVAICAFFGIYTLFFFETTAYQYGNAANVVVVLMASAAVSALILDS 126
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ L ER+ ++ L + + +++ G L L A+ S Y I G
Sbjct: 127 ILLDERIYISSVVGVGLAVSGIAVISWTGEGNLGLILNAALAGSGYGCFSVLIKKFGLNG 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L ++ G E L L F + +
Sbjct: 187 GIYLTRILMFFGSIFLFIPSLEGIEDIHWQWSFIPPLLALSLLPTILGFYCTTKALDYLS 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ V + E PL V + L + + + +++ +V
Sbjct: 247 AAKVQVTELAEPLFAAVLAWMFLNEIPEGRFFVGAILIIAGIV 289
>gi|269123868|ref|YP_003306445.1| hypothetical protein Smon_1107 [Streptobacillus moniliformis DSM
12112]
gi|268315194|gb|ACZ01568.1| protein of unknown function DUF6 transmembrane [Streptobacillus
moniliformis DSM 12112]
Length = 291
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 96/288 (33%), Gaps = 9/288 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G F+ + I + + + L VSV + +R + + F I L K
Sbjct: 9 LGIFFILLSAIGFSTLQMIVKMLPHVSVASKLFYRNIVIIFITFILIRVKGISFKLEKSE 68
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K ++ + + Y L ++ ++ I + L +F E+
Sbjct: 69 WK------LMFARSVFGILGVMINFYTLKYILLADSTTIQKLSSFIVLLLSYLFFNEKFT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG--SSEGFFIEMCV 202
+Q A ++ L ++++ I A+C + I + + G + +
Sbjct: 123 KVQFFALIMSFLGVILIVKPGSSSFSYGYILAILGAFCASFAYICIRGLAIRGKVKPLII 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ +LF ++ LIG G+ + ++ A + +
Sbjct: 183 IFYFSLFSTFVLLPYVLIDRTPLDLKTITLLIGIGVFGAMGQYGITFAYNFAPAKEISVF 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIV-VIAMVVYLLPTVINSG 309
EY+ + V + L + D + + I+ + + +Y +
Sbjct: 243 EYSQVIFSSVLGLIFLGEFPDKYSIMGYLIITLTGIFIYRYNLKRGNK 290
>gi|196035752|ref|ZP_03103155.1| transporter, EamA family [Bacillus cereus W]
gi|195991719|gb|EDX55684.1| transporter, EamA family [Bacillus cereus W]
Length = 308
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 101/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I L L A+ ++ Y
Sbjct: 119 AFEQRKFPAPMQLLAIITALTGTYFIITNGSIENIVLSKEAILFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|167761463|ref|ZP_02433590.1| hypothetical protein CLOSCI_03873 [Clostridium scindens ATCC 35704]
gi|167661129|gb|EDS05259.1| hypothetical protein CLOSCI_03873 [Clostridium scindens ATCC 35704]
Length = 309
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 99/295 (33%), Gaps = 11/295 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N ++ G + F A +LWG + QFL + V ++ +R++ + +F V F
Sbjct: 13 NETMERRKGYIAAFMAGLLWGASSPIAQFLFESKGVVSGWLVPYRLVMAGILLFLYAVVF 72
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ +N + ++ + + F A+ + ++ P + +
Sbjct: 73 KKQNPVEIWKDRNEAIRQIAFSVLGMMGMQYTF-FAAVQETNAGTATIFQYLNPAMLILY 131
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKT 187
+V + +IIA L + + ++ H I +S++ + V + +
Sbjct: 132 FAVIYRVAPKAKEIIAVLCSVSGIFLVATHGNIHAMSISPKGIVIGLLVALTTCFYGVIP 191
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
P+ + + ++ + FL L F FC +
Sbjct: 192 GPLLKKHPAEMVCAWAMMIGGAVLMVVTRPWRMTIQIDWQVIVAFLSIVILGTIFPFCFY 251
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+K G++ P+ V + L + + F +V+ M +
Sbjct: 252 LASLKSIGSVYAGLLSSVEPVAATVLAALFLGTTFQAIDVVGFVLVLSTMFILNY 306
>gi|160874655|ref|YP_001553971.1| hypothetical protein Sbal195_1538 [Shewanella baltica OS195]
gi|160860177|gb|ABX48711.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS195]
gi|315266897|gb|ADT93750.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS678]
Length = 292
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 90/293 (30%), Gaps = 12/293 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ + +F A IL G + +F + + +R+L + ++ G +
Sbjct: 3 SSALAIIFALLAAILMGTIGVLARFAA-LPAEHITFYRLLLGALFLLAYMLLTGKGHQIR 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K +LA F+I A+ Q ++ PV+S F E
Sbjct: 62 HRPSKRNLVN------GIMLAGFMAFYIEAIQYTQMANVIMIIYLAPVVSAIFAHYFFAE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAYCFARKTIPVGSSEGF 196
+L L + + ++ ++ ++M + + ++ +
Sbjct: 116 KLTRLSMASVVVALMGFMLMIPTGPQQASNHTELLGYFYALLALLTYSGFMLINRKPSLS 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + + F + + +++
Sbjct: 176 SPYQSTLVQLCIGALCLLPFVINAPLTPSLPQIAWLVAIGFFPGFLAILLAVKALRQLPA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T G + Y P++++ + +I + + ++ G++++A + +
Sbjct: 236 VTFGTLAYVEPVIVVTLAWWIFGETLSPIQLSGVGLIILAGISQGFISQRKVR 288
>gi|119503691|ref|ZP_01625774.1| hypothetical protein MGP2080_04090 [marine gamma proteobacterium
HTCC2080]
gi|119460753|gb|EAW41845.1| hypothetical protein MGP2080_04090 [marine gamma proteobacterium
HTCC2080]
Length = 293
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 85/296 (28%), Gaps = 16/296 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G ++ + + + + + +L++I R + S+ AI
Sbjct: 1 MTGPRYMLLSAFAFALMGAMVKIASAEGLPLLQIIFVRAIISVLLCLIAI--------RR 52
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + G+L+ + + YA + + ++ PV + L FL E
Sbjct: 53 SGSNPLGRQRGLLLARGVVGFMALTGVFYAFINLPYAQATVLQYLHPVFTAGLAFWFLSE 112
Query: 142 RLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
R +I L +L L + + ++ +A A V
Sbjct: 113 RPTPATLICIALSLLGLGCVVYPYLQSTNTSVMPIAAVLAGLGGALGSGIAYTLVRKLAT 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + V G F + L L+G G + ++
Sbjct: 173 TEHPSVIVLYFPMVCVPATLLLGAGDFIWPSQIGWLTLLGVGCFTQLGQISLTKAMQTDS 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
S + Y + + K+ T I ++ ++ K
Sbjct: 233 ASRATSLSYLQIVFAASLGWLLFKEVPATATVIGAAFILFGALISAALQPNPDKKR 288
>gi|148253369|ref|YP_001237954.1| DMT family permease [Bradyrhizobium sp. BTAi1]
gi|146405542|gb|ABQ34048.1| putative permease of the drug/metabolite transporter (DMT)
superfamily [Bradyrhizobium sp. BTAi1]
Length = 309
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 76/287 (26%), Gaps = 16/287 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + W + + + + + R WSL + + +
Sbjct: 22 YVLLSITALCWAGNAIVGRLAAGHIPPVTLSFLR--WSLAFLLILPLAWKQLRQDWPAIR 79
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + + ++L Q T P+I + L+ L
Sbjct: 80 SRLGIMIALSLTG--IGAFNTLQYWSLEYTQALNTLLLQSSGPLIVAVWSMLLLRVHLTA 137
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q I +L + +L++ L+ L + Y P
Sbjct: 138 AQAIGIVLSLAGVLLILTRGHPTALASITFNRGDLIFLLAMAIFGFYSVLSLKRPQIHGL 197
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+L ++ L L ++ + F+ G+
Sbjct: 198 SMVAFTFGCGAASLIPLLVWELHARPVMVLDAKNLLSLLYVAIFPSTIAYLCFNRGVLLI 257
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + P+ + + L + + I F +V+ + +
Sbjct: 258 GANRAAPFLHVVPVFGSIMAFVFLGEQPEIFHVIAFALVLGGVFIAS 304
>gi|330999985|ref|ZP_08323682.1| putative membrane protein [Parasutterella excrementihominis YIT
11859]
gi|329573209|gb|EGG54824.1| putative membrane protein [Parasutterella excrementihominis YIT
11859]
Length = 315
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/300 (9%), Positives = 84/300 (28%), Gaps = 13/300 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFA 70
+ ++ T+ G + A WG + Q++ + E+ + R+ + +
Sbjct: 1 MRQKMPRSKTLTGIVLAVAAACFWGTMAVSGQYMITACGFNAEELTTVRIAGAGILMLVL 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ +L++ + F L V F A+ + P+
Sbjct: 61 GMLTEKN---FFGSLRDLSVCRDVCFYGLCLFVIQYTFFLAIHACNAGTAAIMVGFGPIF 117
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCF 183
+ + ++++ +I+A + + + ++ L + +
Sbjct: 118 IILWNILVKRQKIVPKEILAVIFAFVGVTLLITKGNFTSLSFSAMGIFWGLVSAGVGAFA 177
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ G + + + +
Sbjct: 178 TIQPRRAIQKIGVTKVVSFGMFVGGILTCFMTPPWEISGHWTPMAIVAAVFVVVFGTVGA 237
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F + + + I+ PL +V V +L + + I +++ + + +P
Sbjct: 238 FWCYLRSTEFIPPALTSILASFEPLSAVVLCVLLLGTSFNYIECIGAALIISNLFILSIP 297
>gi|319937242|ref|ZP_08011649.1| integral membrane domain-containing protein [Coprobacillus sp.
29_1]
gi|319807608|gb|EFW04201.1| integral membrane domain-containing protein [Coprobacillus sp.
29_1]
Length = 285
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 80/287 (27%), Gaps = 9/287 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + + + + ++ + + ++ R L ++ F + G + K
Sbjct: 4 KGILMIVLSALCFAGMNMFVKLSGDLPSIQKSFFRNLVAVIIAFSILKKSGYGFHVDKKN 63
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+K + V YA+ S + P + LKE ++
Sbjct: 64 IKTLFLRSL------CGTVGIIANFYAVDHLLLADASIIQKLAPFFVIIFSFFLLKENVS 117
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
QI + ++ + L + S V A +
Sbjct: 118 KKQIFSIIIAFIGTLFIVKPSFHNTQLFPSFVALIGAMGAGIAYTLVRKLSKNGVKGPQI 177
Query: 205 IPALFYVVWNGFSGGEH--FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ F + + L GL + + A + +
Sbjct: 178 VFYFSIFSCLSVVPYLILNFHPMTLEQLIILFLAGLCAAGGQFAVTAAYSYAAGRDISLF 237
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+Y+ + + F+ +Q D I + ++ + +Y+ +
Sbjct: 238 DYSQVVFAAILGFFVFQQIPDIYSWIGY-FIIFGITLYMFISQRRLK 283
>gi|297531499|ref|YP_003672774.1| hypothetical protein GC56T3_3281 [Geobacillus sp. C56-T3]
gi|297254751|gb|ADI28197.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
C56-T3]
Length = 310
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 92/299 (30%), Gaps = 15/299 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG+ + L E S + + + R+L + V + +
Sbjct: 7 YVLLVAIMVAWGLNVTALKILVEHFSPVALTALRILTAGLVVLLFLWGIGKLERVSWKEA 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + A + G L + P+++ L VFL +R
Sbjct: 67 KQIGVAALFSVVAHHFFLAVG-----LTRTTAVNAGLVLGLVPLVTALLAIVFLGQRPTL 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+++ L ++ + + L L+I + + I + +E V+
Sbjct: 122 FRLLGIALGFFGVVFVVANGDGGLGHLSIGDVYIFLAVLAQGISFIMIKKATVEARVMTG 181
Query: 206 PALFYVVWNGFSGGEHFFLGN---------IPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + F +FL + + ++ ++
Sbjct: 182 WMLVFGSLWLFVLSLVLEPSGLSSLKEGTLPLWMIFLASAVVATALGHMFYNQAVQHLGP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ + PL ++ + ++L +PI ++ F +V ++ + + K
Sbjct: 242 AESAVFINLNPLFSLLGAHWLLGEPISWMQLAGFLFIVAGVMFGSGGMDDVIARFRRAK 300
>gi|303273660|ref|XP_003056183.1| Drug/Metabolite transporter superfamily [Micromonas pusilla
CCMP1545]
gi|226462267|gb|EEH59559.1| Drug/Metabolite transporter superfamily [Micromonas pusilla
CCMP1545]
Length = 372
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 96/292 (32%), Gaps = 8/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G L+ F ++ + ++ + V +V+ R ++ + ++
Sbjct: 88 KTTKFLFGILWFFAHQLIGVGNDVIMKYTGSTLGVAQVVFLRFAFATLTMLPVMIVSGMN 147
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ V + V + +LA + L + + F P+ ++ + V
Sbjct: 148 -------SFKTERVHLHVARSFLLATGIALYCQGLAIAPIAVVTTLNFTIPLFTLVMARV 200
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F+KE+++ ++ I+ ++ ++I+ G + + V SA FA + G
Sbjct: 201 FIKEKVDAIRWISTIVGFSGVVIVVQPGGSGFDPMWLCVLLSAAMFAALDVLNKVFVGKE 260
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ ALF + + L G + + S
Sbjct: 261 SFWSMIFYTALFTSLIATIPALLSWVAPTGFQLCLLAILGAGANLLLFCLLKSFSLLDAS 320
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ YT + +I + + +++ + + +L +
Sbjct: 321 ALAPFRYTELMWSAAVGAWIFGEIPTMATLVGAAVIIPSTLYVVLAENEKTK 372
>gi|212640184|ref|YP_002316704.1| drug/metabolite transporter (DMT) superfamily permease
[Anoxybacillus flavithermus WK1]
gi|212561664|gb|ACJ34719.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Anoxybacillus flavithermus WK1]
Length = 320
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 100/299 (33%), Gaps = 12/299 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +M + + + ++ +F + +R+ +++ + +
Sbjct: 16 RMKSMKAYVALLIGAFSISTSAIFVKF-TDAPSAVIAFYRLFFAVVFMTPLFL----TKH 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ N G + S T+LA H+ + +L + + P+ + G +F
Sbjct: 71 TRETKEMNKTDWGFALLSGTLLAFHFILWFESLRYTSVASSVVLVTLQPLFAFVGGVLFF 130
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGS 192
KE++ + ++A+L I +I+ L IA +
Sbjct: 131 KEKIAMNEWVSAILAISGSVIIGWGDLRVSGEALYGDLLALIACAMVTGYWLVGQHLRKQ 190
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
V I ++ V+ F F++ + F +F++ IK
Sbjct: 191 LSLITYTYIVYGIASIVLSVYVVLFRYSFFSYDERDWWCFILLAIIPTLFGHSLFNWAIK 250
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ V I P+ IV + L + + + I ++VI + Y+ I + K
Sbjct: 251 WVNAAMVSIAILFEPIGAIVLAYIWLGEKVYLTQGIGSLLIVIGIGAYMFGKHIKNFKK 309
>gi|222102292|ref|YP_002546882.1| hypothetical protein Arad_12457 [Agrobacterium radiobacter K84]
gi|221728409|gb|ACM31418.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 305
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/272 (11%), Positives = 87/272 (31%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + + +F L+ S +++ R++ + I++ L +
Sbjct: 13 AAIWGASFTFIKFALQDFSPNQLVLFRLILGAVTLAAIILFTGRSFKLSGTAWFHVAVSS 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-----SVFLKERLNHLQ 147
+ L + +G + + + ++ L +
Sbjct: 73 IFANVVPYLLLSFGEQHTSAGLAGVLIGGTPLVTLFISTLALRAEPATPRKVTGFFLGFL 132
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A ++ + +L + A + +R P+ +++
Sbjct: 133 GVALVVSPWKVEGSSLLGALACFGAAASYAVGYAYVSRFLSPLKLDPITLGANQLISAAV 192
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + F+ + IP L L + F ++ I+ +T ++Y P
Sbjct: 193 LLGLALPFFAWPAIETVSVIPLLSLLYLGVLASGFANILYFRLIQDVGAATASAVDYVVP 252
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ +L +P+ + +++I M +
Sbjct: 253 VFAVLFGAVLLLEPLSWNVILGGAVILIGMAI 284
>gi|254478159|ref|ZP_05091541.1| Integral membrane protein DUF6 [Carboxydibrachium pacificum DSM
12653]
gi|214035888|gb|EEB76580.1| Integral membrane protein DUF6 [Carboxydibrachium pacificum DSM
12653]
Length = 293
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 92/288 (31%), Gaps = 17/288 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A LWG T L+ + + + +V R+ + F I SL +
Sbjct: 1 MLALSAGALWGTTGLFVRMIVKLGFTTADVAFLRMFFGALLAFSIIAVLRQSFSLPLWSW 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K +L L + + A+ + + P V L +F ER+
Sbjct: 61 K-----YLLGTGILSLTLFNWSYFQAIKLTTLPIAVALLYTAPAFVVVLARIFYGERITL 115
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----------CFARKTIPVGSSEG 195
+ +A +L + +L+++ + I+ Y G
Sbjct: 116 RKGVALILTLTGVLLVSGALRSFITGEEISWLGVLYGLLSAVGYGLYTIFAKPLSGHIPP 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I I + + + F L L+ + + +++ + +
Sbjct: 176 ERIAAFTFLIATIALLPISSVLTKPSIFFNTHVILLGLLFGAFSTALPYFLYTRALTFME 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I P++ + VF+LK+P + + ++ A+++ L
Sbjct: 236 AGRAAIFTTMEPVVATLIGVFVLKEPFNFFEFLGITCIISAVILLSLS 283
>gi|332668771|ref|YP_004451778.1| hypothetical protein Celf_0246 [Cellulomonas fimi ATCC 484]
gi|332337808|gb|AEE44391.1| protein of unknown function DUF6 transmembrane [Cellulomonas fimi
ATCC 484]
Length = 318
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/307 (12%), Positives = 91/307 (29%), Gaps = 21/307 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
LP +G L V +L+ + + +S ++ R + S + A++
Sbjct: 2 PHRLPAPLGVLAVVVGSLLFAVNGTVAKLAMQAGLSPTRLVEVRCVGSAVVLVAAVLLVG 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+D + + V +A+ ++ A+ + + P++
Sbjct: 62 ARRLRLRD---RHELWSLAVLGVVGVALVQWLYLTAISRLPVGIALLVEYTAPLLVALWA 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP------ 189
L+E ++ A + L ++ +L L + + +
Sbjct: 119 RFVLREAVHARVWWALAACLGGLALVAQVGEGVVLDLLGLLAAAGAAVSLAAYYLLGDRM 178
Query: 190 ---VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-------GNIPDTLFLIGYGLL 239
M A+ + + G L + L
Sbjct: 179 LSSRDPLSTHAWTMAFAALFWVVLQPVWTYPFGTLTEPVGVPGGTTPPLWALVVWIVVLG 238
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +F GI+ + G++ P+ S+ L + + V+ + +V+ +V+
Sbjct: 239 TVVPYLLFLVGIRSLGPARAGLLGMVEPVAASASAWLFLGEAMTPVQLVGGAVVLAGVVL 298
Query: 300 YLLPTVI 306
Sbjct: 299 AETARRR 305
>gi|317498005|ref|ZP_07956309.1| integral membrane protein DUF6 [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894681|gb|EFV16859.1| integral membrane protein DUF6 [Lachnospiraceae bacterium
5_1_63FAA]
Length = 295
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 94/292 (32%), Gaps = 11/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ G F WG++ + ++L + ++ +++ R+L + + + Y G
Sbjct: 2 NRSLKGICFTVAGGCCWGMSGVMGKYLFDAKDLTATWLVTVRLLGAGICLLLLM-YQRKG 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
S+ + + AV L+F +A+ + A+ + + P++ + +
Sbjct: 61 NSIFRVWKREDSAVNQLIFGMIGMAMCQMTYFLAIQESNPGTATVLQYSAPILIMVFFVL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPV 190
K +++ +I+ + ++ H L + ++ + + +
Sbjct: 121 VEKRFPKKEEVLVLAAVIVGIFLLATHGSIKNLVITNAALFWGLLSAFAFAVYNVQPKKL 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G V + + + L F + +G
Sbjct: 181 LDEFGTLETTGWGMFVGGVLVTPFTKVWSIPGHWDIMTVAMTIGVVFLGTIVAFSCYLHG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I ++ PL+ + S +L Q + + +V A+ +
Sbjct: 241 ISMLGPVQGSMLGCVEPLVATILSATVLGQAFGMIDVVGILCIVGAVTALTV 292
>gi|187929844|ref|YP_001900331.1| hypothetical protein Rpic_2775 [Ralstonia pickettii 12J]
gi|187726734|gb|ACD27899.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii
12J]
Length = 310
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/284 (9%), Positives = 81/284 (28%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + LWG + L+ + + +I+ RV + + + G +L
Sbjct: 6 VLELLTLAALWGGSFLFMRVAAPPFGPVALIALRVAIASCFLVPMLTLRGGMGALRTHWP 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + LT TS P+ + + +L ER++
Sbjct: 66 HLLAVGVLNSAIPFCLFAYAE------LTLTAGFTSVLNAAAPLFAAIVAFTWLGERMSS 119
Query: 146 LQIIAALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+++ + + ++++ G+ + + A + +
Sbjct: 120 LRVLGLAIGFIGVIVLVGGSSVIDAKQGGVAVAAALSATVLYGVASSYTKRFLTGVPPLA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ A+ + + + +F + +
Sbjct: 180 VATGSQLGAAIVLAPLAYWLWP-AQTPTGSVWLHVIALGIACTGVAYILFFRLVAHVGPT 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + P+ ++ + L + + I ++++ +
Sbjct: 239 RAVSVTFLIPVFGVLWGILFLGEQLTLNMVIGCAVILLGASLST 282
Score = 38.4 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 46/138 (33%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + + + + V + + + L + + + L
Sbjct: 9 LLTLAALWGGSFLFMRVAAPPFGPVALIALRVAIASCFLVPMLTLRGGMGALRTHWPHLL 68
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
L ++ FC+F+Y ++ APL + + L + + ++R + I
Sbjct: 69 AVGVLNSAIPFCLFAYAELTLTAGFTSVLNAAAPLFAAIVAFTWLGERMSSLRVLGLAIG 128
Query: 294 VIAMVVYLLPTVINSGKN 311
I ++V + + + K
Sbjct: 129 FIGVIVLVGGSSVIDAKQ 146
>gi|319782556|ref|YP_004142032.1| hypothetical protein Mesci_2851 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168444|gb|ADV11982.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 315
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/301 (9%), Positives = 92/301 (30%), Gaps = 17/301 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY 73
+ + + P++ G ++L + +++ ++ + R+ + + +
Sbjct: 10 AAQPVAGPSLAGYPAAVLCWLLSAGVYIAAKWVAPEMPPWGLCFWRLTLACAILLPIV-- 67
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L +A+ ++ A L + G + L ++PV+++
Sbjct: 68 --HRHHEAMIGLLRTRALEVVAVGAIGLTLCQGMIYHGLNHTDATTAGIIMALSPVMTMV 125
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAY 181
L L E L + + AL+ + ++ + H G + +
Sbjct: 126 LARFVLGEPLGLWKSLGALVALAGMIFIVAHGNLEALLQLKVNAGELWIVGSAFCWGLYT 185
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
R+ + + E + G +
Sbjct: 186 VLLRRAKFGIELLPMVVLLLCAGALVALPFHLWELFNDERSAMDVDSLLALAYLAGPGGA 245
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ +++ ++ S ++ Y + + + + +L + + + +V +V+
Sbjct: 246 LMYYLYNKSVQTLGASRASMLLYLQTVFVAILAYLLLGEGLHDYDLVGAAFIVAGIVLAT 305
Query: 302 L 302
+
Sbjct: 306 M 306
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 16/157 (10%), Positives = 50/157 (31%)
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ A + + + S + + SA + + + L +
Sbjct: 1 MQAMPIAHEAAQPVAGPSLAGYPAAVLCWLLSAGVYIAAKWVAPEMPPWGLCFWRLTLAC 60
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ L + + + + +G+ +T GI+ +P
Sbjct: 61 AILLPIVHRHHEAMIGLLRTRALEVVAVGAIGLTLCQGMIYHGLNHTDATTAGIIMALSP 120
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ +V + F+L +P+ +++ + + M+ +
Sbjct: 121 VMTMVLARFVLGEPLGLWKSLGALVALAGMIFIVAHG 157
>gi|163842893|ref|YP_001627297.1| hypothetical protein BSUIS_A0648 [Brucella suis ATCC 23445]
gi|163673616|gb|ABY37727.1| protein of unknown function DUF6 transmembrane [Brucella suis ATCC
23445]
Length = 338
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/294 (15%), Positives = 98/294 (33%), Gaps = 14/294 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M+G F + ++ + E V V ++I R +++ + + G
Sbjct: 34 EMNPMLGIGFKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWR 88
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 89 GQLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAIL 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 149 HEVVRFYRWSAVLIGLFGVMIIIWPRLTLFSAGSVGRNEAVGALAALGAAVMSAVAMMLV 208
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ ++ V S + + N L+G G + +
Sbjct: 209 RRLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNRSQLAMLVGAGFAGGIGQILLTEC 268
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 269 YRHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 322
>gi|157960328|ref|YP_001500362.1| hypothetical protein Spea_0499 [Shewanella pealeana ATCC 700345]
gi|157845328|gb|ABV85827.1| protein of unknown function DUF6 transmembrane [Shewanella pealeana
ATCC 700345]
Length = 334
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 113/303 (37%), Gaps = 20/303 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++G ++WG+T + ++ L V + ++ R + ++ G+ + S
Sbjct: 4 TNKDVVLGWTAAIAVAVIWGVTGVVSKPLSMAVDPMTLVFFRYVTAVIGLSIIFFFTSRS 63
Query: 78 LSLLKD-----TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
SL KD + V + + F +L + P +V
Sbjct: 64 KSLSKDLGGSLKIDKKDIVKIALCGIIGQGAFSLFNFLSLSHIGATENGVIQGMQPFATV 123
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSA 180
F G +F+ R+N +Q A + L + M++ + + +++ W+A
Sbjct: 124 FFGMLFMNFRMNKMQWGAFIASALCIYAMSVGPTNSIEGGTPLLGYVFVTCSMLSLAWTA 183
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF--SGGEHFFLGNIPDTLFLIGYGL 238
+ A GS + +A+ F V+ G S + L +
Sbjct: 184 HLRASLADKYGSVVSMLYQYISVAVTGFFVVMAMGLDLSQIFIILDSPLLLGLLIFLGTG 243
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ + I Y KR + + PL+ V +V L + ++ +TI+ ++V+A+
Sbjct: 244 ISGGSYLIQLYSFKRIGVEKATMALNLMPLVGYVVAVLTLGEQMELSKTIIVSLIVVALY 303
Query: 299 VYL 301
++
Sbjct: 304 MFT 306
>gi|52078708|ref|YP_077499.1| membrane protein YbfH [Bacillus licheniformis ATCC 14580]
gi|52784076|ref|YP_089905.1| YbfH [Bacillus licheniformis ATCC 14580]
gi|52001919|gb|AAU21861.1| conserved hypothetical membrane protein YbfH [Bacillus
licheniformis ATCC 14580]
gi|52346578|gb|AAU39212.1| YbfH [Bacillus licheniformis ATCC 14580]
Length = 302
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 83/287 (28%), Gaps = 20/287 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L I+WG T + T+ LE ++++ +R L L + +
Sbjct: 9 GHLAAVITIIIWGTTFVSTKVLLEDFPPVDILFYRFLIGLIVLIMV-------HPHVLTF 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF-LKERL 143
+ + +++ AL V P+I+ L E+L
Sbjct: 62 RSWRQEALFAGAGLCGVTLYFLLENIALTLTYASNAGMIVAVIPMITAVLAHFLLSGEKL 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----------WSAYCFARKTIPVGS 192
I L ++ + + L + ++ T +
Sbjct: 122 EPRFFIGFAAAFTGLALIFFNGQMMLKLNPLGDILAAASAFVWAAYAILMKKISTFGYHT 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + F F + L ++ F +++ +
Sbjct: 182 IQCTQRIFLYGLLFMVPALFLFDFRFDASPFSSPVNWLNILFLGAGASALCFVTWNWSVG 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P++ I +SV IL++ + V + + + +
Sbjct: 242 VLGAVKTSAYIYMVPVITIAASVIILQEKLTWVAFCGGALTLAGLYI 288
Score = 35.7 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 1/141 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
AV E F + + +V F + L
Sbjct: 10 HLAAVITIIIWGTTFVSTKVLLEDFPPVDILFYRFLIGLIVLIMVHPHVLTFRSWRQEAL 69
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVRTIVF 290
F + F + + + S G++ P++ V + F+L + ++ I F
Sbjct: 70 FAGAGLCGVTLYFLLENIALTLTYASNAGMIVAVIPMITAVLAHFLLSGEKLEPRFFIGF 129
Query: 291 GIVVIAMVVYLLPTVINSGKN 311
+ + + N
Sbjct: 130 AAAFTGLALIFFNGQMMLKLN 150
>gi|15598669|ref|NP_252163.1| hypothetical protein PA3473 [Pseudomonas aeruginosa PAO1]
gi|107103006|ref|ZP_01366924.1| hypothetical protein PaerPA_01004075 [Pseudomonas aeruginosa PACS2]
gi|218890279|ref|YP_002439143.1| putative chloramphenicol-sensitive protein [Pseudomonas aeruginosa
LESB58]
gi|12644671|sp|O68827|RARD_PSEAE RecName: Full=Chloramphenicol-sensitive protein rarD
gi|9949617|gb|AAG06861.1|AE004768_6 hypothetical protein PA3473 [Pseudomonas aeruginosa PAO1]
gi|218770502|emb|CAW26267.1| putative chloramphenicol-sensitive protein [Pseudomonas aeruginosa
LESB58]
Length = 299
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 62/293 (21%), Positives = 112/293 (38%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A +L+ P Y LE + L+V++HRV+WS+P VF +V +L
Sbjct: 6 QGVLLSLAASVLFVTLPGYVHLLEPLDSLQVVAHRVVWSIPMVFLLVVATRQWPTLRAAW 65
Query: 85 LK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + +A ++ + WG FI+A L + S YF+ P+ V +G VF E
Sbjct: 66 CRLFAEPWLLACFPLTAAMMLLQWGIFIWAPLAGKTLELSLGYFLLPLAMVLVGRVFYGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL LQ IA + +L +++ + +G
Sbjct: 126 RLTPLQAIAVACALAGVLHEFW-LTRAFSWVSLVTALGYPPYFMLRRRMGVDALSGFVFE 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L + L F L L GL+++ F + + GI
Sbjct: 185 MLFLLPLALAALYWLGDESQAFREAPRLWLLLPMLGLISALAFGAMMASSRLLPMGLFGI 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ + +V L + + + + +A+++ + K +
Sbjct: 245 LSYVEPVLLFLVAVLFLGEAFRPEQLWTYAPIWLAVLLTGWDSARLLRKQARR 297
>gi|326793674|ref|YP_004311494.1| hypothetical protein Marme_0357 [Marinomonas mediterranea MMB-1]
gi|326544438|gb|ADZ89658.1| protein of unknown function DUF6 transmembrane [Marinomonas
mediterranea MMB-1]
Length = 301
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 82/300 (27%), Gaps = 2/300 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ T+ G A ++WG P++++ L+ +S +++++ R + S + ++Y
Sbjct: 1 MQSSDNNTIKGISLGVLASLIWGSWPVFSKVASLQHLSPVDIVTLRFIVSGVLLLPILIY 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ L L ++ + +
Sbjct: 61 QAVKLKYLFSKGLLLAIGAGAPYAYLATTGITYSSSAHFGAIGPSTMLVFSTLGSIFLFK 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ L + +LI +L +A T+
Sbjct: 121 EKISLARGLGISLILAGVVLIASRSFSDGSEINHAVLMGDFMFVGCGALWASFTLFSKYW 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L ++ +
Sbjct: 181 KIPSWVATAMVSVVSGIACIPFTAQVVQEVPIELILQHGFYQGVLAAIVALYCYAKSVSY 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S I P + ++ V IL + I+ ++ V + M+ L + K++
Sbjct: 241 LGASRGAIFAAFVPPVALILGVIILGETINLTESVGLTAVCVGMLFALGLIRMPIIKSRA 300
>gi|190574084|ref|YP_001971929.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
gi|190012006|emb|CAQ45628.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
Length = 308
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 96/280 (34%), Gaps = 8/280 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S M L + + + +G+ + ++ V EV R + L + ++
Sbjct: 8 SPSATPMRAALLMLGSTMAFGLMAVAIRYATRYVPTQEVAFFRNAFGLLALLPMLLRPGH 67
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + I +AL + TP+
Sbjct: 68 APLKTQQLPR-------YFVRSAIGLGSMLCAFWALGHLPLAQAVSLSYSTPLFVTIAAV 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E + + A ++ + +L++ + ++ +A + I +
Sbjct: 121 LWLGETVRIRRWAAVVVGFIGVLVIVRPGTAGFTAGSLVAVAAAVLSSLVAIQIKQLTRV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + + L+L+ G+L + +++ ++ ++
Sbjct: 181 DSADTVVLYTYVFWVPLSLVPALFVWVWPSGMAWLWLLATGVLGTVGQLLWTRALRLGEV 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
S + + + L+ + + + +D I GI++ A
Sbjct: 241 SALTPISFLQLPLVTLLGWLLFNESVDRWTLIGAGIILAA 280
Score = 36.0 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 25/61 (40%)
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + L+ + Y+ PL + +++V L + + R + I ++V + P
Sbjct: 89 MLCAFWALGHLPLAQAVSLSYSTPLFVTIAAVLWLGETVRIRRWAAVVVGFIGVLVIVRP 148
Query: 304 T 304
Sbjct: 149 G 149
>gi|117621088|ref|YP_857362.1| drug/metabolite exporter family transporter [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117562495|gb|ABK39443.1| transporter, 10 TMS drug/metabolite exporter (DME) family
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 363
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 89/301 (29%), Gaps = 25/301 (8%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ WG+ + ++ LE + L + + R + + +
Sbjct: 73 FLAALVILCWGLNFVAIKWGLEGIPPLLLGALRFVGVVFPAILLV-----------PRPA 121
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P + A L F + S V ++ ++L ER
Sbjct: 122 MPWRWLLAYGGAISLGQFSFLFCAMKFGMPAGMASLVLQSQVVFTLLFAMIWLGERWQPH 181
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+A L L ++ H L L +T A + G + + ++
Sbjct: 182 HWVALPLAGAGLYLIATHGEGNLTLLGFVLTLCAAACWGLGNVINRQIGLRYQTTLPSLI 241
Query: 207 AL-------------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
A + + L + + ++ + R
Sbjct: 242 AWGGLVPILPFLALSWLFEGPELMASSLLNISWQGFLCVLYLSFVATWLGYGLWGRLLMR 301
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ V + P + +V++ +L + ++ + +V++ VV+LL + K +T
Sbjct: 302 YPVAQVAPLSLLVPCVGMVAAALLLDEHPTPLQWLGSALVLLGFVVHLLGGRLRWFKPQT 361
Query: 314 K 314
Sbjct: 362 A 362
>gi|99079989|ref|YP_612143.1| hypothetical protein TM1040_0148 [Ruegeria sp. TM1040]
gi|99036269|gb|ABF62881.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 295
Score = 74.2 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 96/299 (32%), Gaps = 5/299 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ + A T MG L + A I++ + ++ L + +V VI+ R + V +
Sbjct: 1 MDQLMAKNDTRMGILLMIGATIIFALQDGISRHLASEYNVFMVITIRYWFFAAFVITLAL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+G + T + + +F A +L + A + + P++
Sbjct: 61 RQTGSIRAAAQTSQRW----VQIFRAFVLVAEICVMVLAFTVLGLVESHAVFVCYPLLIA 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L L E++ + A + + +LI+ A+ +A FA +
Sbjct: 117 ALSGPILGEQVGWRRWAAIGVGFIGVLIILQPGSGVFQIAALIPLLAALMFALYGLLTRY 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ +++ G + D ++ + + + +
Sbjct: 177 VARRDTTATSFFYTGVYGMLFVTPLGVWWWEPMTAADWGWMATLCVTGALGHWLLIKCYE 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
A+ S V Y + + + + + T I IVV A + +
Sbjct: 237 MAEASAVQPFAYMQLPWAAMIGLLVFGEDMRTNVIIGAAIVVAAGLFTFWRESLKRAAR 295
>gi|329905071|ref|ZP_08273999.1| protein of unknown function DUF6, transmembrane [Oxalobacteraceae
bacterium IMCC9480]
gi|327547743|gb|EGF32519.1| protein of unknown function DUF6, transmembrane [Oxalobacteraceae
bacterium IMCC9480]
Length = 292
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 83/289 (28%), Gaps = 7/289 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
L + A +LW + T+ LE EV R ++ V A+
Sbjct: 6 NHRRAVLLMIIAAVLWSSAGVMTRQLESARGFEVTFWRSFFAAVFVLGAL----RWQQHG 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K + + S + A + F+ AL T V P+++ L +FL++
Sbjct: 62 RVLTKLRNLGLVGLVSGAMWATMFCCFMIALTMTTVANTLIVLSVAPLLTALLAWLFLRQ 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---AVTWSAYCFARKTIPVGSSEGFFI 198
+ +A + + M + ++ + + A A + G +
Sbjct: 122 HIAPRTWLAIAVASSGIGWMFSSGVSHVSGTSLVGMGIAFGAPLAASVNFILLKKAGAQV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + + + +
Sbjct: 182 DLIPAVLVGATLSALAMLPFSWPMQASLHDVAILAGLGFFQLGLPCMMVVTASRALSAPE 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ LL V + + T + +V+ A+V L +
Sbjct: 242 MSLLALVEVLLGPVWAWLGAGEIPATETLVGGALVIAALVFNELVALRR 290
>gi|254933250|ref|ZP_05266609.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293584810|gb|EFF96842.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|328475800|gb|EGF46536.1| hypothetical protein LM220_06887 [Listeria monocytogenes 220]
gi|332310918|gb|EGJ24013.1| Integral membrane protein DUF6 [Listeria monocytogenes str. Scott
A]
Length = 319
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 100/311 (32%), Gaps = 19/311 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G F+ A WG T+ + + + S R+ + V +
Sbjct: 2 QKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + + G L G P++
Sbjct: 62 LRLPTKWEFGLILLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFA 184
VFL+ER+ + + L I + ++ L +G + +++ A ++
Sbjct: 117 VFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ G G+ + + + + L + LF++ + +F
Sbjct: 177 AGSMDTGLMTGYMLFLGSVMLFGLSRFMEPDGMSELVAVHSWKLWLLFVVSAVVATAFGN 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++Y + + S I PL ++ ++ L + I + + FG ++I +++
Sbjct: 237 FVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGAL 296
Query: 305 VINSGKNKTKK 315
+ + K K
Sbjct: 297 MDLIYERKKTK 307
>gi|86136551|ref|ZP_01055130.1| membrane protein, putative [Roseobacter sp. MED193]
gi|85827425|gb|EAQ47621.1| membrane protein, putative [Roseobacter sp. MED193]
Length = 301
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 88/303 (29%), Gaps = 14/303 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE------QVSVLEVISHRVLWSLPGVFFAI 71
+ + + A + T L + L + L++ R L++ + A+
Sbjct: 4 SPPQNPPLAAALITLATVFIAATTLLAKALGTEALGPALHPLQISHGRFLFAFVAISTAV 63
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
L + + + + ++ + F+ PV
Sbjct: 64 AILRFKL--------QRPEWRLHIGRTSCGWLGITLMFASVAYIPLADATAIAFLNPVFG 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ L L E++ + AA + ++ +I+ + A+ +A + I +
Sbjct: 116 MLLAIPLLGEQVGRWRWGAAGIALIGAMILLRPTPDSFQPAALLALAAAAIMGLELIFIK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + VL ++ + + + L G L + F G+
Sbjct: 176 KLAGRERPLQVLWFNNALGMMIATAAVSPVWHMPTALQWGALAALGTLMACAQACFVNGM 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
RA S V Y + + F D + + +++ + K
Sbjct: 236 ARADASFVAPFSYATLIFATLYDFFGFGVIPDWITLLGAAVILSGAAILAWREGRQRPKQ 295
Query: 312 KTK 314
+
Sbjct: 296 QAA 298
>gi|281420582|ref|ZP_06251581.1| putative membrane protein [Prevotella copri DSM 18205]
gi|281405355|gb|EFB36035.1| putative membrane protein [Prevotella copri DSM 18205]
Length = 293
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 85/293 (29%), Gaps = 16/293 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S + G A + +G PL T L + + V+ +R L ++ +++
Sbjct: 2 TSSNKVKGFAAGVVAAVCYGTNPLGTLELYGDGFNSSSVLIYRYLLAVLMFAVVMLFRKE 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L + ++ + + S FV P+++ L +
Sbjct: 62 SFKVKWGHLIRLGV------LGCMFSLSSATLYVSFHYMAAGIASTILFVYPIMTAILMT 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTI 188
VF E++ +A LL + + ++ +G L+ + + +
Sbjct: 116 VFFHEKVTCSTSLAILLAVSGVGLLYQGDGNDKLSTAGFALVMCSSLLYALYIISINQWK 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G S F ++ +V L +
Sbjct: 176 NPGMSNIKFTFYILVFGLLTMFVYSFIAGEPILMLQTPKQWLCAAQLALLPTVLSLFFMT 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I + IM P+ ++ V + + I ++ + + +
Sbjct: 236 VSINLIGSTPAAIMGALEPVTAVIIGVCVFGESFSLQLAIGILAILAGVTIII 288
>gi|82699510|ref|YP_414084.1| hypothetical protein BAB1_0642 [Brucella melitensis biovar Abortus
2308]
gi|161618593|ref|YP_001592480.1| hypothetical protein BCAN_A0634 [Brucella canis ATCC 23365]
gi|189023839|ref|YP_001934607.1| hypothetical protein BAbS19_I06020 [Brucella abortus S19]
gi|225627125|ref|ZP_03785163.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225852143|ref|YP_002732376.1| hypothetical protein BMEA_A0656 [Brucella melitensis ATCC 23457]
gi|237815077|ref|ZP_04594075.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254688901|ref|ZP_05152155.1| hypothetical protein Babob68_01696 [Brucella abortus bv. 6 str.
870]
gi|254693382|ref|ZP_05155210.1| hypothetical protein Babob3T_01709 [Brucella abortus bv. 3 str.
Tulya]
gi|254697033|ref|ZP_05158861.1| hypothetical protein Babob28_04785 [Brucella abortus bv. 2 str.
86/8/59]
gi|254703957|ref|ZP_05165785.1| hypothetical protein Bsuib36_08529 [Brucella suis bv. 3 str. 686]
gi|254707665|ref|ZP_05169493.1| hypothetical protein BpinM_12036 [Brucella pinnipedialis
M163/99/10]
gi|254709752|ref|ZP_05171563.1| hypothetical protein BpinB_05661 [Brucella pinnipedialis B2/94]
gi|254718767|ref|ZP_05180578.1| hypothetical protein Bru83_04373 [Brucella sp. 83/13]
gi|254729932|ref|ZP_05188510.1| hypothetical protein Babob42_01714 [Brucella abortus bv. 4 str.
292]
gi|256031242|ref|ZP_05444856.1| hypothetical protein BpinM2_11413 [Brucella pinnipedialis
M292/94/1]
gi|256044320|ref|ZP_05447224.1| hypothetical protein Bmelb1R_07466 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256060752|ref|ZP_05450915.1| hypothetical protein Bneo5_10370 [Brucella neotomae 5K33]
gi|256113157|ref|ZP_05454034.1| hypothetical protein Bmelb3E_10647 [Brucella melitensis bv. 3 str.
Ether]
gi|256369057|ref|YP_003106565.1| hypothetical protein BMI_I617 [Brucella microti CCM 4915]
gi|260168378|ref|ZP_05755189.1| hypothetical protein BruF5_08428 [Brucella sp. F5/99]
gi|294851987|ref|ZP_06792660.1| hypothetical protein BAZG_00902 [Brucella sp. NVSL 07-0026]
gi|306840193|ref|ZP_07472973.1| transporter, DME family [Brucella sp. NF 2653]
gi|82615611|emb|CAJ10598.1| Protein of unknown function DUF6 [Brucella melitensis biovar
Abortus 2308]
gi|161335404|gb|ABX61709.1| protein of unknown function DUF6 transmembrane [Brucella canis ATCC
23365]
gi|189019411|gb|ACD72133.1| Protein of unknown function DUF6 [Brucella abortus S19]
gi|225617960|gb|EEH15004.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225640508|gb|ACO00422.1| protein of unknown function DUF6 transmembrane [Brucella melitensis
ATCC 23457]
gi|237789914|gb|EEP64124.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255999217|gb|ACU47616.1| hypothetical protein BMI_I617 [Brucella microti CCM 4915]
gi|294820576|gb|EFG37575.1| hypothetical protein BAZG_00902 [Brucella sp. NVSL 07-0026]
gi|306404724|gb|EFM61023.1| transporter, DME family [Brucella sp. NF 2653]
Length = 338
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 14/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 35 MNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWRG 89
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 90 QLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAILH 149
Query: 141 ERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 150 EVVRFYRWSAVLIGLFGVMIIIWPRLTLFSAGSVGRDEAVGALAALGAAVMSAVAMMLVR 209
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ ++ V S + + N L+G G + +
Sbjct: 210 RLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTECY 269
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 270 RHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 322
>gi|70729279|ref|YP_259016.1| hypothetical protein PFL_1897 [Pseudomonas fluorescens Pf-5]
gi|68343578|gb|AAY91184.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
Length = 307
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/284 (10%), Positives = 83/284 (29%), Gaps = 1/284 (0%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + W +P+ LE S + R L + + + L +D
Sbjct: 9 VLATAAVILCWAYSPVGIHIGLEGYSPGHLALLRFLIASLFMAAMALVLKISLPRWRDLP 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + A + ++ + V L
Sbjct: 69 WLLVLGFFAIAFHHVSLNYGQQGLSAGASSVLAQSAPIFSTLIAFFWLREPVSGWRWLCV 128
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + +++++ L + +A F + G ++
Sbjct: 129 VIGLLGAVLVVAGDKGLGAIEPRGLLVLLAAFSWGLYFVLQRRFSGRYGVLTTVCYMVWG 188
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L +V+ + L+ ++ + ++Y + R ++S I Y
Sbjct: 189 GTLLLLVYAPGLTQAVAQASLRVNLAVLLLGLFPSALAYLAWAYVLARVEVSRASIAMYL 248
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P + ++ + +L + + + + +V+ +++ L
Sbjct: 249 IPPVAMLLAATVLGETLQSSVVLGAAVVLGSVMAMQLDGRWRRR 292
>gi|254236424|ref|ZP_04929747.1| hypothetical protein PACG_02407 [Pseudomonas aeruginosa C3719]
gi|126168355|gb|EAZ53866.1| hypothetical protein PACG_02407 [Pseudomonas aeruginosa C3719]
Length = 299
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/293 (20%), Positives = 110/293 (37%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A +L+ P Y LE + L+V++HRV+WS P VF +V +
Sbjct: 6 QGVLLSLAASVLFVTLPGYVHLLEPLDSLQVVAHRVVWSTPMVFLLVVATRQWPTLRAAW 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + +A ++ + WG FI+A L + S YF+ P+ V +G VF E
Sbjct: 66 RRLFAEPWLLACFPLTAAMMLLQWGIFIWAPLAGKTLELSLGYFLLPLAMVLVGRVFYGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL LQ IA + +L +++ + +G
Sbjct: 126 RLTPLQAIAVACALAGVLHEFW-LTRAFSWVSLVTALGYPPYFMLRRRMGVDALSGFVFE 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L + L F L L GL+++ F + + GI
Sbjct: 185 MLFLLPLALAALYWLGDESQAFREAPRLWLLLPMLGLISALAFGAMMASSRLLPMGLFGI 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ + +V L + + + + +A+++ + K +
Sbjct: 245 LSYVEPVLLFLVAVLFLGEAFRPEQLWTYAPIWLAVLLTGWDSARLLRKQARR 297
>gi|331000191|ref|ZP_08323880.1| putative membrane protein [Parasutterella excrementihominis YIT
11859]
gi|329572614|gb|EGG54253.1| putative membrane protein [Parasutterella excrementihominis YIT
11859]
Length = 303
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 79/293 (26%), Gaps = 11/293 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G A WG + Q+L + + R++ + + F G
Sbjct: 3 KILKGVFLAAFAGCCWGSMAVAAQYLFTNCGFEARHLTTLRLIGAGVLLLVLQAAFGGFQ 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S+LK + +L++ +L + + FF+ + G I +L +
Sbjct: 63 SILKPFKEKRNIRDVLIYGVGVLLIQYTFFLAIEQSNAGTAAIMVGVGPLFIIGYLA-IC 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
+ + L I + ++ + + + V
Sbjct: 122 KHRKPVPKEFFCLFLAISGVSLVVTKGNFESLDFVSTGAFWGLLSSAFGAFCTVQPKNVI 181
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S G + + + F +
Sbjct: 182 SRVGVSNVVGWGMVVGGSIACLFTNPFAMDVHWTLPSVLCYFQIIAFGTVAAFWCYLKST 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S I+ PL + SV IL ++ + ++ M++ P+
Sbjct: 242 EYVIPSITAILGSFEPLSAVALSVIILGATFNSYELLGATAILANMLILAWPS 294
>gi|289596770|ref|YP_003483466.1| protein of unknown function DUF6 transmembrane [Aciduliprofundum
boonei T469]
gi|289534557|gb|ADD08904.1| protein of unknown function DUF6 transmembrane [Aciduliprofundum
boonei T469]
Length = 282
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 86/275 (31%), Gaps = 10/275 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A L+G L+ + + + + ++ RV+++ +F ++Y G + K L
Sbjct: 10 GAVFLFGFAGLFGKIIS-LPTMMIVLGRVVFAAIFLFLVMIYRKEGFKVPKRDL------ 62
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
L +LAVHW F Y++ + +Y P+ + L KE++ + ++
Sbjct: 63 LYLPVLGLLLAVHWSLFFYSIQLSTVAIGLITYSTFPIFTAVLEPWIFKEKIRKMNVVLP 122
Query: 152 LLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
++ + +L + + + I + + +
Sbjct: 123 IITFIGILFIVPNLNVQNNVTQGVIWGTLSGLTFSFLTIINRKYVQEYSSVTLAFYQDSF 182
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ ++ + +F + R T I+ PL
Sbjct: 183 AAIFLLPILFLFDVSPSFSDIAYVVLLGIVFTGLAHTLFISSLSRVNARTASIIASLEPL 242
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I+ + L + I IV+ L
Sbjct: 243 YGIILAFVFLNEVPAIHTAIGGAIVLATSFYATLN 277
>gi|254169441|ref|ZP_04876266.1| Integral membrane protein DUF6 [Aciduliprofundum boonei T469]
gi|197621611|gb|EDY34201.1| Integral membrane protein DUF6 [Aciduliprofundum boonei T469]
Length = 283
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 86/275 (31%), Gaps = 10/275 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A L+G L+ + + + + ++ RV+++ +F ++Y G + K L
Sbjct: 11 GAVFLFGFAGLFGKIIS-LPTMMIVLGRVVFAAIFLFLVMIYRKEGFKVPKRDL------ 63
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
L +LAVHW F Y++ + +Y P+ + L KE++ + ++
Sbjct: 64 LYLPVLGLLLAVHWSLFFYSIQLSTVAIGLITYSTFPIFTAVLEPWIFKEKIRKMNVVLP 123
Query: 152 LLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
++ + +L + + + I + + +
Sbjct: 124 IITFIGILFIVPNLNVQNNVTQGVIWGTLSGLTFSFLTIINRKYVQEYSSVTLAFYQDSF 183
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ ++ + +F + R T I+ PL
Sbjct: 184 AAIFLLPILFLFDVSPSFSDIAYVVLLGIVFTGLAHTLFISSLSRVNARTASIIASLEPL 243
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I+ + L + I IV+ L
Sbjct: 244 YGIILAFVFLNEVPAIHTAIGGAIVLATSFYATLN 278
>gi|194365499|ref|YP_002028109.1| hypothetical protein Smal_1722 [Stenotrophomonas maltophilia
R551-3]
gi|194348303|gb|ACF51426.1| protein of unknown function DUF6 transmembrane [Stenotrophomonas
maltophilia R551-3]
Length = 307
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/280 (11%), Positives = 95/280 (33%), Gaps = 8/280 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S M L + + + +G+ + ++ V EV R + L + ++
Sbjct: 7 SPSATPMRAALLMLGSTLAFGLMAVAIRYATRYVPTQEVAFFRNAFGLLALLPMLLRPGH 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + I +AL + TP+
Sbjct: 67 APLKTQQLPR-------YFVRSAIGLGSMLCAFWALGHLPLAQAVSLSYSTPLFVTIAAV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++L E + + A ++ + +L++ + ++ +A + I +
Sbjct: 120 LWLGEVVRVRRWAAVVVGFIGVLVIVRPGTAGFTAGSLVAVGAAVLSSLVAIQIKQLTRI 179
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V+ +F+V + + L+L+ G+L + +++ ++ ++
Sbjct: 180 DSADTVVLYTYVFWVPLSLIPAVFVWVWPTGVAWLWLLATGVLGTIGQLLWTRALRLGEV 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
S + + + L+ + + + +D + GI++ A
Sbjct: 240 SALTPISFLQLPLVTLCGWLLFNETVDRWTIVGAGIILAA 279
>gi|28869542|ref|NP_792161.1| hypothetical protein PSPTO_2344 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28852784|gb|AAO55856.1| membrane protein, putative [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 288
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 79/288 (27%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLS 79
+ G F+ A L+ +++L + ++ R L + + +G
Sbjct: 5 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYLVHTLLMACIFMPSAGLRV 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + ++L FI + + L L
Sbjct: 65 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATAVNFLAPL------LVTALSVPLL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ Q IA ++ + ++I+ G + SA CFA + F
Sbjct: 119 HERVTRGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSP 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LF + + + + FL+ G + + + A + +
Sbjct: 179 TTSNFFAGLFNTLMMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAML 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 239 APFSYCQIVFAGLLGFLVFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 286
>gi|254508004|ref|ZP_05120132.1| permease, DMT superfamily [Vibrio parahaemolyticus 16]
gi|219549112|gb|EED26109.1| permease, DMT superfamily [Vibrio parahaemolyticus 16]
Length = 275
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 85/279 (30%), Gaps = 12/279 (4%)
Query: 38 GITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
G+ ++++ ++ + I R L + + LS + + +
Sbjct: 4 GLGWIFSKETIQGLPPFGFIGLRFLVASVCLLPLCFRAFRRLSRV-------QLAQAIGG 56
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
+ + ++ +F ++ +I + KER A + I
Sbjct: 57 GGILALALLAWVHAISISETLGEGAFIVSLSMIIVPIVAWALFKERPKRAFWFAMPIAIA 116
Query: 157 SLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
L ++L G I +A F + + L + L +V
Sbjct: 117 GLAFLSLQGGWNSSPGQIWFLANACLLALHFNINSKLAQKLPILLLTCIQLFVTGLIALV 176
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ + + F L S + + + G K ++ P+ ++
Sbjct: 177 MSLLLEEPPVSVDSSIWGWFAASAVLATSLRYVMQTLGQKGCNPGNAALIMLLEPIWTVI 236
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
S+ + + T + I +++ A++ Y + +
Sbjct: 237 LSILWYGEQLSTNKLIGCSLILFALLFYRTDGRLFRVRR 275
>gi|154174549|ref|YP_001407557.1| transporter [Campylobacter curvus 525.92]
gi|112803788|gb|EAU01132.1| transporter [Campylobacter curvus 525.92]
Length = 299
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 93/286 (32%), Gaps = 10/286 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ GT+ ILWG + + Q+L + +S ++ +R+L S + + + L
Sbjct: 9 LFGTIITLAGGILWGFSGVCGQYLFSQGISADWLVPYRLLISGAILVAFYL-LKSWENAL 67
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +++ L + + Y++ + + + P + + + + K
Sbjct: 68 APLKDLRLLPQLFIYALLGLMMTQYSYFYSIELSNAAVATVIQYTAPALILAVVCIRQKR 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+++A +L +L ++I+ H L + + + +
Sbjct: 128 APKINELVALILAMLGVVILATHGDLGSLVISARALFWCLVSAVCVCVYNLAPAKLNAKY 187
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + A + F L F F + G+K
Sbjct: 188 PVVLVLGWGMVIAGVVLCVFMRVWRLEVAATAQQWLAFWAVITLGTIFAFSFYMIGVKTI 247
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S ++ P+ + F L + + F +++ + +
Sbjct: 248 GASKASLIACIEPVSAAFFAYFWLDTQFVFLDFVGFALIICCIFLL 293
>gi|301301165|ref|ZP_07207321.1| putative membrane protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300214565|gb|ADJ78981.1| Transporter, drug/metabolite exporter family [Lactobacillus
salivarius CECT 5713]
gi|300851164|gb|EFK78892.1| putative membrane protein [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 310
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 89/301 (29%), Gaps = 11/301 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+S M G + A WGI+ QF+ + +S R L S +
Sbjct: 3 SSSKVMKGIFWSAVASATWGISGTTIQFISQNQHIPTDWFLSTRTLGSGTILLIISFILY 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + ++ L + F A+ + + +++P+ V G
Sbjct: 63 G-KKTFNVFSTWKSFGHLFAYATLGLMANLLTFYLAIQSGNASAATILQYLSPLFIVLGG 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTI 188
+R +IA ++ +L +L+ + + +A +
Sbjct: 122 IFIKHQRPLSTDLIAFIISLLGVLLAITKGDLTQMSIPMNSFLWGLGSGITAAFYVVLPR 181
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
P+ + + A + + + F +
Sbjct: 182 PIAQDNPPLVVLGWGTFIAGVLFNLYHPVWINTPHITSTVVLSISTVILVGTIIPFGLLL 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y + A + IM+ P+ + SV L ++ V + +V++A+ +
Sbjct: 242 YSSRFAPSDVISIMDALQPVTTSILSVIFLGLEMNWVEIVGIILVIVAIYILQRGRRNME 301
Query: 309 G 309
Sbjct: 302 K 302
>gi|262164479|ref|ZP_06032217.1| putative membrane protein [Vibrio mimicus VM223]
gi|262026859|gb|EEY45526.1| putative membrane protein [Vibrio mimicus VM223]
Length = 339
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 84/291 (28%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + ++ +
Sbjct: 43 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWFVAMLILTPFCL----PSAIRQWPT 98
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 99 VKRYLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 158
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 159 LSVVGGVLSLSGLAYMLGEGNPLFFLYQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 218
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + +H +L + ++ I
Sbjct: 219 WTLIYLQGVCAVFMLTPLWLTSDHLLPTEGSTSLIAYAGIAASLLAPWMWVKAIDAIGAD 278
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 279 STAMFMNLLPVFSVSLAATLLGETVHPYHLIGGLLVISGVALSQLKLPRRN 329
>gi|325293161|ref|YP_004279025.1| hypothetical protein AGROH133_06765 [Agrobacterium sp. H13-3]
gi|325061014|gb|ADY64705.1| hypothetical protein AGROH133_06765 [Agrobacterium sp. H13-3]
Length = 310
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 96/291 (32%), Gaps = 6/291 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S T+ G L F A+ + + + +E +S +E L+ L + F
Sbjct: 1 MSDQTLKGILLAFAAFAAYAWSDASVKLIEGQISPIESAFFGALFGLIALPFI-----RK 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + + A F+ P + V
Sbjct: 56 RNDRWVDVVKTTNRPLWIIRFFAAGTGAVGSVTAFTHLSMAEAFALIFLLPSFVTIMSVV 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKE++ + A ++ L +L++ L I + A + +
Sbjct: 116 FLKEQVGIRRWSAVIIGFLGVLVILRPGFRELGIGHIGAIIGGFSGALSIVIFRAMGPSE 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L + +G + F + L L GYGLL + + Y + A +
Sbjct: 176 KNVSLYGAGVLGCLTISGIAMVPTFIMPGGEQWLLLAGYGLLGALGNVLVMYAAQYAPAA 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+G +Y+ L I+ I ID + ++V + ++ L+
Sbjct: 236 MIGPTQYSQMLWAILFGYLIFGDRIDGWMLMGIALIVGSGLLTLIREKQRK 286
>gi|229103903|ref|ZP_04234581.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-28]
gi|228679471|gb|EEL33670.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-28]
Length = 294
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 98/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDYIPPLTLVWLRFIIAFVVLYGILKIA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQVASIGTVNTYVILGVLYLGVISTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSSFFIGGILIICSVLITTFEK 293
>gi|327184316|gb|AEA32763.1| permease [Lactobacillus amylovorus GRL 1118]
Length = 306
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 94/302 (31%), Gaps = 12/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L +++ + + R++ S + +
Sbjct: 3 TQKQRRLWAFLAALACVMWGISGLFAKSLFNVSSEITPMWLSQIRMVVSGIILLIVAGFL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + F+ P +
Sbjct: 63 KQ--KPIAAMKNKHDAWVIIAYGIFGLLPVQLFYFIVVQQANASIATILQFIGPFFVMGY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ K+ + + +IAA+ ++++ H ++ +V + A
Sbjct: 121 LAFTHKQVMRRIDVIAAICAFSGVVLLATHGRFNHFAITPSVLFWGLLSAVGVTTNTLIP 180
Query: 195 G------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + H + + F + +
Sbjct: 181 IGVLKRVSSLVVTGWGLLSAGICLMIVHPRMPHIPNTPHVWLDVAVVIVIGTLIPFQLMT 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST +++ P V SV + + I +VV+A + +
Sbjct: 241 NSLRFIKASTASLLDAFEPFSATVGSVLCFGLVMTPMDWIGSILVVVAAMALNISPRKKK 300
Query: 309 GK 310
GK
Sbjct: 301 GK 302
>gi|113867161|ref|YP_725650.1| DMT superfamily permease [Ralstonia eutropha H16]
gi|113525937|emb|CAJ92282.1| predicted permease, DMT superfamily [Ralstonia eutropha H16]
Length = 322
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/308 (12%), Positives = 99/308 (32%), Gaps = 15/308 (4%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWS 63
+ + + + + + G L + + +G ++ + + V ++ R + +
Sbjct: 8 ARPMTASAQTAPDHARDKLAGVLLIALSASAFGAMAIFARFAYAAGADVYGLLLVRFVLA 67
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ + + GL + L + F AL Q L +
Sbjct: 68 AAALAWVMRTRGIGLPPWRRVLA------LAAMGGIGYVGQSFCFFSALNHAQASLVALL 121
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF 183
++ P+ L ++FLKERL +IA +L + + L +A+ + +
Sbjct: 122 LYLYPLFVTILAAIFLKERLTTAAVIALVLCSVGAGLTVGGGEGSPLGIALGLAAAVIYS 181
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVW-------NGFSGGEHFFLGNIPDTLFLIGY 236
+ + G I +V+ G F
Sbjct: 182 VYIIVGARVTAGVNPIATTTVICTAAALVYGAVGLLRMGAGAPPQFPATAGGWLALAGIA 241
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
L F G++R + ++ P++ ++ + +L + I T + + G+++
Sbjct: 242 LLSTVLAILTFFAGLQRLGAAQASMLSTLEPVVTVLLAALLLGEHIGTAQAVGGGLILAG 301
Query: 297 MVVYLLPT 304
++
Sbjct: 302 VLWLTRRG 309
>gi|322434184|ref|YP_004216396.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX9]
gi|321161911|gb|ADW67616.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX9]
Length = 316
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/309 (10%), Positives = 86/309 (27%), Gaps = 20/309 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+++ S ++ V Y WG T + +F +E + + R + + P +
Sbjct: 1 MTQSRLSPRVLIAFACV---YFFWGSTYVAIRFGVEVLPPFVLAGVRFMIAGPLMLLVCA 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L +G+L+ ++ W + L +V
Sbjct: 58 ARGLKLKQSPRDFAWLAVIGILMLGVGNTSLVWCEQFLSSGLSSLLLAVIPLYVALFEVF 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------------AIAVTWSA 180
+ E L + + L+I+ + L A++W++
Sbjct: 118 ----LPRGEGLRAKGWLGITIGFAGLVILVWPGLLESLHGSRTQLIGTIVALMGALSWTS 173
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + ++ ++ V +
Sbjct: 174 GSILSRRTSLATTAFVAAAWEMVFAGLFNTSVMLATHSYRDIHWNTQAVLSIAWLVTFGS 233
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + Y + ++ V Y P++ +V L + + + ++IA+ +
Sbjct: 234 IVGYTAYIYLLDNVPVAKVSTYAYINPIVAVVLGAIFLHERMVPIEYAGMAAILIAVYLV 293
Query: 301 LLPTVINSG 309
+ +
Sbjct: 294 TSSKLRSGK 302
>gi|227112404|ref|ZP_03826060.1| hypothetical protein PcarbP_05537 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 318
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 10/298 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P GT+ + A I+ G + + V+ R + + LL
Sbjct: 3 PQTRGTIEMAIAMIISGTVGWFV-LTAGQPAMTVVFWRCAFGALTMLIVCGLLG----LL 57
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + K G+ V L +W A + + Y P + + LG++F +E
Sbjct: 58 RRGIISRKQAGIAVLGGLALVFNWTLLFGAYAHASIAVATVVYHTQPFMLLGLGAIFFRE 117
Query: 142 RLNHLQIIAALLIILSLLIMTL-----HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L +I L ++++ + + A F +
Sbjct: 118 TLTLNKIGWLLCAFSGIVLIVSAQAGADGNDKSYLSGVLMALGAAFFYAVAAAITKKLSG 177
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ I L VV + + + + + I++
Sbjct: 178 IPPHVLVLIQLLVGVVILAPFATMPVSPTASQWGMLVTIGVIHTGLMSTLLYSAIQKIPT 237
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ VG + + P++ + +D ++ ++++ I + K +
Sbjct: 238 ALVGALSFIYPVVAALVGWAAFGHRLDAMQLAGAVAILLSAAGMTFGWCITFNRQKRR 295
>gi|73540747|ref|YP_295267.1| hypothetical protein Reut_A1044 [Ralstonia eutropha JMP134]
gi|72118160|gb|AAZ60423.1| Protein of unknown function DUF6, transmembrane [Ralstonia eutropha
JMP134]
Length = 308
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 89/292 (30%), Gaps = 11/292 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + + +G ++ +F + L ++ A+
Sbjct: 12 AREKFFGVLLIALSASAFGAMAIFARFAYEAGADVY----GLLTVRFALAAVALAFVMRV 67
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + F AL Q L + ++ P+ L ++FL
Sbjct: 68 RGIRLPSWGRVLALAAMGGIGYVGQSFCFFSALNHAQASLVALLLYLYPLFVTILAAIFL 127
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KERL +IA +L + + L +A+ + + I + G
Sbjct: 128 KERLTTAAVIALVLCSVGAGLTVGGGEGSPLGIALGLAAAVIYSVYIIIGARVTAGVNAI 187
Query: 200 MCVLAIPALFYVVW-------NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I +V+ G F + L L F G++
Sbjct: 188 ATTTVICTAAALVYGTVSVLRIGAGVPPQFPVTAGGWLAMLGIALLSTVLAILTFFAGLQ 247
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
R + ++ P++ + + +L + I + + G+++ ++
Sbjct: 248 RLGAAQASMLSTLEPVVTVALAAVLLGEHISGAQAVGGGLILAGVLWLTRRA 299
>gi|332140270|ref|YP_004426008.1| permease of the drug/metabolite transporter [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550292|gb|AEA97010.1| permease of the drug/metabolite transporter [Alteromonas macleodii
str. 'Deep ecotype']
Length = 347
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 102/289 (35%), Gaps = 10/289 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G + + A LWG T QF ++S L + + + + + + +
Sbjct: 44 LKGVIAIVIASFLWGTTGTAAQFAPEISPLAIGAFAMGVGGILLCVSAHRALVRDAHILF 103
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ G + + LA + + + + + V+ + + +
Sbjct: 104 SRPWVLLFGSVCVAVYPLAFYSAMRLSGVAIGTVVSIASAPLFAAVMERVISKKPVSFKW 163
Query: 144 NHLQIIAALLI----------ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+I A+ I L LL H + ++ +A A + +
Sbjct: 164 VVSFVIGAIGIALLAAGKSTETLGLLEAQRHQTLGVVLGLVAGLTYAGYSWAAKQLIETG 223
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
M L A ++ + + G++ F I ++ L + + +F YG++
Sbjct: 224 ANSTSSMAGLFGCAALVLLPSLYFTGQNVFESTINTSVSLYMAVVPMFLGYLLFGYGLRT 283
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ S ++ PL+ + ++F++ + V + G+V + +++ +
Sbjct: 284 TQASKATLITLIEPLVATLFTIFLIGEAFKPVGWVGMGLVCLCLLIQTV 332
>gi|83950996|ref|ZP_00959729.1| Putative transporter, RarD family protein of the DMT superfamily
[Roseovarius nubinhibens ISM]
gi|83838895|gb|EAP78191.1| Putative transporter, RarD family protein of the DMT superfamily
[Roseovarius nubinhibens ISM]
Length = 309
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 97/301 (32%), Gaps = 5/301 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G CA +++ I + + V E + R ++LP + +V +
Sbjct: 1 MHPVKGITLKLCAVMMFIIMASLIKATADHVPAGEAVFFRSFFALPIILGWLVMRGDLST 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK V +A + + L + ++FL
Sbjct: 61 GLKVNSPMGHFWRGFVGTAAMGLSFLALGLLPLPEATALGYAAPLLTVIFAAMFLDEKVG 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEG 195
R+ + + A +II+ ++ +G + ++ + A C A I +
Sbjct: 121 MFRIGAVLLGLAGVIIVLSPRLSTFAGESVETMQAVGALCALMGATCAALAQIYIRKMVA 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + + + + + + + + LI GLL + + A
Sbjct: 181 TEQTSAIVFYFTVTSTLLSLITLPFGWVMPAPRELVLLISAGLLGGLGQIFLTSSYRFAH 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S V +Y + + + + + +V++A ++ +L K +
Sbjct: 241 ASVVAPFDYASMIFALGIGFLVFDEVPTGTMLAGAALVILAGIIIILRERQLGLKEGRAR 300
Query: 316 S 316
+
Sbjct: 301 A 301
>gi|328467565|gb|EGF38627.1| hypothetical protein LM1816_10747 [Listeria monocytogenes 1816]
Length = 319
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 97/302 (32%), Gaps = 18/302 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ WG T+ + + + S R+ + V + K
Sbjct: 11 YFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKKLRLPTKWEF 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + G L G P++ VFL+ER+
Sbjct: 71 GLIFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSVVFLRERIGA 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFARKTIPVGSS 193
+ + L I + ++ L +G + +++ A ++ ++ G
Sbjct: 126 WRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKLAGSMDTGLM 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G+ + + + + L + G LF++ + +F +++Y + +
Sbjct: 186 TGYMLFLGSVMLFGLSRFMEPGGMSELVAVHSWKLWLLFVVSAVVATAFGNFVYNYAVGK 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S I PL ++ ++ L + I + + FG ++I +++ + + K
Sbjct: 246 IGPSRSAIFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGALMDLIYERKK 305
Query: 314 KK 315
K
Sbjct: 306 TK 307
>gi|260174236|ref|ZP_05760648.1| putative integral membrane protein [Bacteroides sp. D2]
gi|315922505|ref|ZP_07918745.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696380|gb|EFS33215.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 303
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 97/298 (32%), Gaps = 15/298 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A +G+ PL+ + ++V V+ +R ++ + +
Sbjct: 2 TNKTKGFIYGAIAAASYGMNPLFALPLYAAGMNVDTVLFYRYFFATIVLGILMKMQHQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K + + + + + + S FV PV+ + +F
Sbjct: 62 ALHKADVLPLVIM------GLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVAVIMGIF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
KE+++ + + + LL + + ++ G + L +++++ Y +
Sbjct: 116 FKEKISAITVFSILLALSGIALLYQGDGNKPLSTLGIIFVLLSSLSYAIYIVGVNRSTLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y+V F L L + + I
Sbjct: 176 NLPTTKLTFYAILFGLSVYIVRLNFCTELQIIPSAWLWADVLTLAILPTAVSLICTALAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ I+ P+ + V + + + + +++ A+ + ++ +
Sbjct: 236 HYIGSTSTAILGALEPVTALFFGVLLFHEKLTPRLMVGILMIITAVTLIIIGKSLIKK 293
>gi|228931309|ref|ZP_04094238.1| Permease, drug/metabolite exporter [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228828312|gb|EEM74018.1| Permease, drug/metabolite exporter [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 298
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 101/296 (34%), Gaps = 5/296 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + WG + L+ + LE V +++ R + + + A V+F S
Sbjct: 1 MKPIKANLMILLVTMTWGTSYLFMKIGLETVPSFSLVALR--FGIAFLVCAAVFFKQFRS 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ TLK + L+F + + A + + I +F +
Sbjct: 59 IHFVTLKYGFILRFLLFVVSASVILGLKTTSASNAGFLASLTVIFIPLLSIVLFKDRLSY 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ ++ L + + ++ +TL+SG L +A + A+ + +
Sbjct: 119 RLIISSLVAMTGIGLLTLNNQLTLNSGDLLCI--LAALFYAFHIIVTGRAAKVANTLQLG 176
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L ++ L+ ++F + I + K +
Sbjct: 177 ILQLGFAGGLGLLSALIFEEPQLPSTKESWIAVLVLSIFCSAFAYIIQAMSQKYTTPTHT 236
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
G++ P+ + + + + + T I +++ +++ + S K+
Sbjct: 237 GLIFSLEPVFSALFAYLFMNELLSTQGYIGALLILSGVILAEIKVKRKSTFKAKKR 292
>gi|148556888|ref|YP_001264470.1| hypothetical protein Swit_3987 [Sphingomonas wittichii RW1]
gi|148502078|gb|ABQ70332.1| protein of unknown function DUF6, transmembrane [Sphingomonas
wittichii RW1]
Length = 309
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 88/297 (29%), Gaps = 9/297 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY 73
+ S + G L A + + + ++ S++E++ R LP +
Sbjct: 9 SQPRSSHALQGILLRSIAVVFFALMSAAMKWASEGGASLVELVFFRSAVGLPVTLAWLAL 68
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G ++ G + + I V L+ F P +
Sbjct: 69 GPGIGAVRTK------RPGAHLLRSMIGMVSLTMLYQGLMLLPIADAVTIGFSAPAFATL 122
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-TWSAYCFARKTIPVGS 192
L + L E++ + A + L + I+ SG L I A A T+ +
Sbjct: 123 LSVLVLHEKVGPHRWAAVAIGFLGVFIVARPSGSALPLAGIVYTLLGAAASAAATVTIRE 182
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ L + +G H L+ G+ + + + ++
Sbjct: 183 MSRVETHGSIVFWFFLSTTLVSGVGMLFHSAPHPPFTWALLLFGGVTGAAAQLLLTRALQ 242
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +S V +YT + + I I +++ + +
Sbjct: 243 VAPVSVVAPFDYTQIIWAALLGWLIWSTLPGLNTAIGAALIIASGLATAWREHRLHK 299
>gi|325919517|ref|ZP_08181536.1| rarD protein [Xanthomonas gardneri ATCC 19865]
gi|325549993|gb|EGD20828.1| rarD protein [Xanthomonas gardneri ATCC 19865]
Length = 253
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 74/247 (29%), Positives = 127/247 (51%), Gaps = 2/247 (0%)
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ A + + GL + P+A+ ML S+ +A +WG +I+A+ S YF
Sbjct: 1 MLVVAWLLATSGLRWWRQIAAQPRALWMLAGSSVAIAFNWGLYIWAINAGHVIEASLGYF 60
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFA 184
+ P++SV LG + LKERL +Q +A + L +L +TL +G P ++L +A ++ AY
Sbjct: 61 INPLLSVLLGVLVLKERLQRIQWVAVVCATLGVLWLTLDAGAPPWIALGLAFSFGAYGLL 120
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFV 243
RK + V G +E L +PAL W G F G T L+ G++ +
Sbjct: 121 RKLVAVDPVAGLGVESVYLFVPALLLAGWGEQGHGGAFLSGWELRTDLLLIFGGVVTAVP 180
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F+YG++R LS VGI++Y P L ++ V+ +P D R I F + + +++++
Sbjct: 181 LIGFAYGVRRIPLSLVGILQYIGPSLQLLLGVWFFHEPFDQGRAIGFAAIWVGLLLFVGD 240
Query: 304 TVINSGK 310
+V+ S +
Sbjct: 241 SVLRSRR 247
>gi|293401805|ref|ZP_06645946.1| putative transmembrane transporter [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304757|gb|EFE46005.1| putative transmembrane transporter [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 315
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 82/295 (27%), Gaps = 21/295 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L F +WG T + T+ L ++ L+++ R + ++
Sbjct: 1 MTNNRKQGHLCAFLTIFIWGTTFISTKILLADMTPLQILFTRFVIGYLTLWIMY------ 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-S 136
+ + +++ ALL Q + P + FL
Sbjct: 55 -PHRCTLEDKKQERWFAGAGLCGITLYYLLENIALLYTQTTNVGVIISIAPFFTAFLSSK 113
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA------------YCFA 184
+ + I L +L +L++++ + +
Sbjct: 114 IMKESSKGRFFYIGFALAMLGILLISIPDNAGVSFHPYGDVLALLAALVWSIYSLLCRKL 173
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
L + + F + + G L ++ F
Sbjct: 174 STFHMTTIGITRRTFFYGLLFMMPIILTQDTFHVSQIWHGGWPVIGNLLFLGFGASALCF 233
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + + Y P++ ++S IL++ I + I + + +
Sbjct: 234 VTWNKAVSILGSIQTSVYIYLVPVITALTSFLILQESISMKKLIGIIFTICGLFL 288
>gi|184159641|ref|YP_001847980.1| DMT family permease [Acinetobacter baumannii ACICU]
gi|332876126|ref|ZP_08443910.1| putative membrane protein [Acinetobacter baumannii 6014059]
gi|183211235|gb|ACC58633.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Acinetobacter baumannii ACICU]
gi|322509551|gb|ADX05005.1| DMT family permease [Acinetobacter baumannii 1656-2]
gi|323519571|gb|ADX93952.1| DMT family permease [Acinetobacter baumannii TCDC-AB0715]
gi|332735744|gb|EGJ66787.1| putative membrane protein [Acinetobacter baumannii 6014059]
Length = 300
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 89/290 (30%), Gaps = 1/290 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASVFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + + +F +
Sbjct: 69 PLKWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISVLLFKEQI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 SFKKWLCILLGLCGAVLVVSGDHGFGMPSPYSLLIVLAAIAWGLYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ L + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTLPLLFYSAHLPNEILHATWQANMSVVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMNLAVIFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRT 298
>gi|331090902|ref|ZP_08339745.1| hypothetical protein HMPREF9477_00388 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405456|gb|EGG84989.1| hypothetical protein HMPREF9477_00388 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 293
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 90/301 (29%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+M G L + I WG + + + + + +++ R + + A
Sbjct: 1 MKKNSMFGKLALLFVAIAWGSSMVVIKGSTDTLPAGTLLACRFTVAGVILALA------- 53
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + + +F L + + ++ + F V FLG +
Sbjct: 54 -NFNKLKQIDKDYLKSGIFIGVCLFMAYFTQTIGVMLEMPGKSHFLSSAYCVFVPFLGWL 112
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----WSAYCFARKTIPVGS 192
LKE+ +IAA + + ++++++ + W+A A
Sbjct: 113 ILKEKPKIYHVIAATMCAVGIILVSVAGNFSISYGDSISIISSVFWAAQIIAIAKWGKDK 172
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + L +V L + + F + + K
Sbjct: 173 DPGLITMLQFVVCAVLAWVFTLTMENPGAIEWNMGAVGGVLYLGIVCSGICFLLQTIAQK 232
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++V I+ + +V + + F ++ A+++ K
Sbjct: 233 TENPTSVSIILSFENIFGLVFGAIFFNEKFTPRSIMGFVLIFAAIIIAETELSFLKKKKA 292
Query: 313 T 313
Sbjct: 293 K 293
>gi|319955667|ref|YP_004166934.1| hypothetical protein Celal_4194 [Cellulophaga algicola DSM 14237]
gi|319424327|gb|ADV51436.1| protein of unknown function DUF6 transmembrane [Cellulophaga
algicola DSM 14237]
Length = 303
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 104/300 (34%), Gaps = 14/300 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + +G +F IL+ + + + L ++ R+++SLP +
Sbjct: 5 SSASRLGGVFAILGVILFSAKAVIVKLAYQYHIDYLTLLLFRMVFSLPFYLVIAFWKK-- 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +K ++ F + F L + L F+ P I V + V
Sbjct: 63 -PAHLEIIKKIDWFWLVFFGFIGYYLASLFDFIGLQYIKAGLERIILFIYPTIVVLISWV 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPV 190
F K++L+ Q+IA ++ L +++ I L + + + + +
Sbjct: 122 FFKKKLSRNQLIALIITYLGVIVAFWDEIGLKGEGTIFGGCLILFSAITYASYLVGSGWL 181
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFS 248
G I + V+ + G++ F + +L + S
Sbjct: 182 IPKFGTLQFTSYAMIVSTIVVIIHFLIKGDYNFFDYPKEVYYLGLTMAIFCTLIPSFLVS 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+R ST I P+ I+ + L + + +++I +V+ + + NS
Sbjct: 242 AAIERLGASTFSIFGSLGPVATILLAFVFLDERVTFLQSIGMCVVLFGVTLVAFNKRKNS 301
>gi|301116848|ref|XP_002906152.1| Drug/Metabolite Transporter (DMT) Superfamily [Phytophthora
infestans T30-4]
gi|262107501|gb|EEY65553.1| Drug/Metabolite Transporter (DMT) Superfamily [Phytophthora
infestans T30-4]
Length = 337
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/316 (12%), Positives = 102/316 (32%), Gaps = 19/316 (6%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSL 64
K ++ + + G F+ A + + I + ++ + E + R++ +L
Sbjct: 27 KSKLANELENDNQPLMKRAKGLGFIVFAGLNFSIASICIKYASHRATSHETVFWRMIIAL 86
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
+ Y L + ++ + YA+ +
Sbjct: 87 VLNYVWARYKKRKLVVEPKYRGLLLFRCIVGTIGVNI------QFYAMSKMVLTDATVII 140
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG------------IPLLSL 172
+P+ + FLG+ FL E++N + ++A + L ++ +T + +
Sbjct: 141 LTSPIFTFFLGAAFLGEKINQIDLLAGITSFLGVMFVTRPAFLFPANNVTKEAPPLAVYC 200
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
AI + ++ + + + ++ G +
Sbjct: 201 AIGGSMTSAVVYILLRRLSKVDHLVAIHYFFVFGTITSIMTLLILGVKMTVPLESTFLFA 260
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
L G G + + G + + +M Y + ++ V IL + ++ + + GI
Sbjct: 261 LFGSGFFSFIGQVFMTKGFQLEQAGIASVMRYFDVVFVVAMDVLILGESVNVLSLLGAGI 320
Query: 293 VVIAMVVYLLPTVINS 308
++ + + +L
Sbjct: 321 IMAGVSMIVLRRAREK 336
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 41/130 (31%)
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
I S E + + + + + L+ ++ + I
Sbjct: 64 CIKYASHRATSHETVFWRMIIALVLNYVWARYKKRKLVVEPKYRGLLLFRCIVGTIGVNI 123
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y + + L+ ++ T+P+ L + I+ + + + ++ P +
Sbjct: 124 QFYAMSKMVLTDATVIILTSPIFTFFLGAAFLGEKINQIDLLAGITSFLGVMFVTRPAFL 183
Query: 307 NSGKNKTKKS 316
N TK++
Sbjct: 184 FPANNVTKEA 193
>gi|239625250|ref|ZP_04668281.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519480|gb|EEQ59346.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 304
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 87/299 (29%), Gaps = 19/299 (6%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G L F ++WG T + T+ LE S +E++ R + ++
Sbjct: 5 KTPTGHLAAFITILIWGTTFISTKVLLETFSPVEILFIRFVMGYLALWLVC-------PR 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + +++ AL + P + L +FL
Sbjct: 58 TLKLDSRRQEPLFMAAGLCGITMYYLLENIALTFTLASNVGVIISIAPFFTAILSCLFLG 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP----------- 189
Q L+ ++ + + L + + +
Sbjct: 118 GTRPGRQFFIGFLLAMAGIFLLSFGSSSLSINPMGDILAVAAAIIWAVYSTLTKKISALG 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G+ + I + + F+ + L ++ F ++
Sbjct: 178 YGTIQTTRRTFFYGLIFMIPALALMDFNVSLSQVTSPLNLCNLLFLGLGASALCFVTWNL 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K + Y P++ VSS +LK+P+ + + + + P++
Sbjct: 238 AVKILGSVRTSVYIYMVPVITTVSSALVLKEPVTMTAVCGIALTLAGLFLSERPSMHQR 296
>gi|254242158|ref|ZP_04935480.1| hypothetical protein PA2G_02888 [Pseudomonas aeruginosa 2192]
gi|296388009|ref|ZP_06877484.1| hypothetical protein PaerPAb_07634 [Pseudomonas aeruginosa PAb1]
gi|313108834|ref|ZP_07794819.1| putative chloramphenicol-sensitive protein [Pseudomonas aeruginosa
39016]
gi|126195536|gb|EAZ59599.1| hypothetical protein PA2G_02888 [Pseudomonas aeruginosa 2192]
gi|310881321|gb|EFQ39915.1| putative chloramphenicol-sensitive protein [Pseudomonas aeruginosa
39016]
Length = 299
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/293 (20%), Positives = 111/293 (37%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A +L+ P Y LE + L+V++HRV+WS+P VF +V +
Sbjct: 6 QGVLLSLAASVLFVTLPGYVHLLEPLDSLQVVAHRVVWSIPMVFLLVVATRQWPTLRAAW 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + +A ++ + WG FI+A L + S YF+ P+ V +G VF E
Sbjct: 66 RRLFAEPWLLACFPLTAAMMLLQWGIFIWAPLAGKTLELSLGYFLLPLAMVLVGRVFYGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL LQ IA + +L +++ + +G
Sbjct: 126 RLTPLQAIAVACALAGVLHEFW-LTRAFSWVSLVTALGYPPYFMLRRRMGVDALSGFVFE 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L + L F L L GL+++ F + + GI
Sbjct: 185 MLFLLPLALAALYWLGDESQAFREAPRLWLLLPMLGLISALAFGAMMASSRLLPMGLFGI 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ + +V L + + + + +A+++ + K +
Sbjct: 245 LSYVEPVLLFLVAVLFLGEAFRPEQLWTYAPIWLAVLLTGWDSARLLRKQARR 297
>gi|93006749|ref|YP_581186.1| hypothetical protein Pcryo_1925 [Psychrobacter cryohalolentis K5]
gi|92394427|gb|ABE75702.1| protein of unknown function DUF6, transmembrane [Psychrobacter
cryohalolentis K5]
Length = 315
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 99/296 (33%), Gaps = 13/296 (4%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFA 70
++ + +GT+ + A + WG +++ +L S + R++ + +
Sbjct: 3 HTDSATSARQSWIGTIQIITAAVCWGTLGIFSTYLNQNGFSGWQTTILRIVTAALIILVM 62
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ L L + + +G+ + S + + +A++ + PV
Sbjct: 63 LPKLWPQLIKL----RPKQWLGLALQSLIGVLGMSVCYFFAVIYVGAGPAVALLYTAPVF 118
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCF 183
S+ + L E + + AL+ + + + L + I +
Sbjct: 119 SLLFSAFLLNESITRQSALLALMAVFGVGLTMLGEQAQVNWGIALGLLSGICYSLYGVLG 178
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
R + F +++ L + + G+ L L +
Sbjct: 179 KRAMHDAHPAPLVFFTSIIISAGILLLLPETYKTYGQLLTLPLSTWGYALGLSLIGTVVP 238
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F ++ +++ + + PL I + +L Q + ++ + ++++A +
Sbjct: 239 FALYMKALEKLPATRASVFTIFEPLTAIALATLLLHQSLSWIQYVGVILILLAALF 294
>gi|116622788|ref|YP_824944.1| hypothetical protein Acid_3688 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225950|gb|ABJ84659.1| protein of unknown function DUF6, transmembrane [Candidatus
Solibacter usitatus Ellin6076]
Length = 298
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 98/293 (33%), Gaps = 11/293 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
K+ A + G L + +LW ++ +F L ++ + V+ R ++S + I
Sbjct: 5 KKQAPPRVVYGWLALLL--MLWSSNFIFARFALRELPLGVVLGFRYVFSAALMLPVI-AL 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GG S +K G+L L + F+ + ++PV+ +
Sbjct: 62 GGGQSRVKHPWNWHDLPGLLTIGLLGLVGNQALFVVGISMTSVAHAGVITALSPVLVLLG 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKT 187
+ ER++ +I+ L ++++ G + +V A
Sbjct: 122 SAALGHERISGARIVGLLTAACGVVVLQFSRGAAGAATLKGDAVMLASVVVFAGFNLAAK 181
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + L + +S + + + I+
Sbjct: 182 PYAERAGTVRVNAIAYFAAGLLALPLALWSLSRGAHGSLLAWCGVAYMAAGSSVAGYLIY 241
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+Y ++ S V ++ Y P+++ + ++ L + G+V+ + V
Sbjct: 242 AYALRHLAASRVSVVVYLQPIVVTLLAIVALGERPGAGFLPAVGLVLAGVWVV 294
>gi|315039195|ref|YP_004032763.1| permease [Lactobacillus amylovorus GRL 1112]
gi|325957669|ref|YP_004293081.1| permease [Lactobacillus acidophilus 30SC]
gi|312277328|gb|ADQ59968.1| permease [Lactobacillus amylovorus GRL 1112]
gi|325334234|gb|ADZ08142.1| permease [Lactobacillus acidophilus 30SC]
Length = 306
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 95/302 (31%), Gaps = 12/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L +++ + + R++ S + +
Sbjct: 3 TQKQRRLWAFLAALACVMWGISGLFAKSLFNVSSEITPMWLSQIRMVVSGIILLIVAGFL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + F+ P +
Sbjct: 63 KQ--KPIAAMKNKHDAWVIIAYGIFGLLPVQLFYFIVVQQANASIATILQFIGPFFVMGY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ K+ + + +IAA+ + ++++ H ++ +V + A
Sbjct: 121 LAFTHKQVMRRIDVIAAICAFIGVVLLATHGRFNHFAITPSVLFWGLLSAVGVTTNTLIP 180
Query: 195 G------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + H + + F + +
Sbjct: 181 IGVLKRVSSLVVTGWGLLSAGICLMIVHPRMPHIPNTPHVWFDVAVVIVIGTLIPFQLMT 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST +++ P V SV + + I +VV+A + +
Sbjct: 241 NSLRFIKASTASLLDAFEPFSATVGSVLCFGLVMTPMDWIGSILVVVAAMALNISPRKKK 300
Query: 309 GK 310
GK
Sbjct: 301 GK 302
>gi|326793231|ref|YP_004311052.1| hypothetical protein Clole_4182 [Clostridium lentocellum DSM 5427]
gi|326543995|gb|ADZ85854.1| protein of unknown function DUF6 transmembrane [Clostridium
lentocellum DSM 5427]
Length = 295
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/289 (16%), Positives = 110/289 (38%), Gaps = 13/289 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + IL+G L+ + + S ++ R + + A LS +
Sbjct: 6 ISLILVMILFGSIGLFVRAI-NCSSSQIALARGVIGSVCLILASFILKQPLS----WKRI 60
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+G+LV S + ++W F A + Y+ PVI++FL + LKERL+ ++
Sbjct: 61 KPNLGILVASGIAIGLNWIFLFEAYKYTTIATATICYYFAPVIAMFLSPLILKERLSGIK 120
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFFIEM 200
I+ L +L ++ +T + I + +
Sbjct: 121 IVCILAAMLGMICITSTGESGVGQNHFLGIAYGIGAAVLYASIMIMNKFLKDVTSLESTV 180
Query: 201 CVLAIPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L AL + + F+GG + L + TL ++ + + I+ ++ T+
Sbjct: 181 PQLGFAALAILPYVLFNGGFNISQLDSRSITLLIVVGVVHTGIGYLIYFGAFQKLSGQTI 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P+ I+ S +L++ + +++ + +++ + + + +
Sbjct: 241 AAFSYIDPISAIILSSLLLREEMTSLQIVGGILILGSTYISEIYRSKKA 289
>gi|226311387|ref|YP_002771281.1| hypothetical protein BBR47_18000 [Brevibacillus brevis NBRC 100599]
gi|226094335|dbj|BAH42777.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 308
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 87/297 (29%), Gaps = 13/297 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG T L Q + + R + + + +
Sbjct: 6 LLLVAVIWGTTFLIVQQAIASLPPNTFNGVRFTIAALFLLIIYFIRNRHRGQTSEW--RG 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ V L + + LL F + V+ + L+ER+ I
Sbjct: 64 PLLRAGVILGFWLCLGYALQTVGLLYTSPSKAGFITGLAVVLVPLFSFLLLRERVKPFAI 123
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI---------- 198
+L L ++T + + +A CFA + + G F
Sbjct: 124 FGVILAAFGLYLLTQNQSFSFNLGDALIFVAAICFAMQIVFTGKYAPRFAALPLAITQLG 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V++ F+ + ++ + F + K+ +
Sbjct: 184 TVAVMSWLYAFFFEDWSRAFDPAILFIPEVAFGLIVTSIFATALAFLAQTALQKQTSSTR 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V ++ P+ V+S + + + + ++ M++ LP + +K
Sbjct: 244 VALIFALEPVFAAVTSYVFIHEILSGRQLTGCLLIFTGMILAELPIQEWVRNFRQRK 300
>gi|91762685|ref|ZP_01264650.1| drug/metabolite transporter (dmt superfamily) [Candidatus
Pelagibacter ubique HTCC1002]
gi|91718487|gb|EAS85137.1| drug/metabolite transporter (dmt superfamily) [Candidatus
Pelagibacter ubique HTCC1002]
Length = 273
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 88/271 (32%), Gaps = 6/271 (2%)
Query: 40 TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
L ++ EV+ R + L +F I G L T ++ + + +
Sbjct: 1 MDLLVKWSSDYPTGEVLFFRGFFGLLPTYFLIP--KGKLKTFYTTERSKEHLFRCLMGLM 58
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
L + AL + + P+ L L E++ + +A L+ + ++
Sbjct: 59 ALIA----IVVALRELPLAVVVSLSYAAPLFITVLSIFLLSEKVGIFRWLAVLIGFIGVI 114
Query: 160 IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
I+ + L A TI + + + + +
Sbjct: 115 IIAEPGFKGMNYLYFLPLIFCIGMAFVTITIRKLSTTEPIWLISIFFTITISIAGLATIP 174
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
+ + N D + L G+ + K +++S V ++Y A + I FI
Sbjct: 175 MGWKMPNFQDFILLALIGVTGGSANLFLTQSYKLSEVSLVAPLKYLALVFAIFFGYFIWN 234
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I +VV+A ++ + + K
Sbjct: 235 EIPTIKTLIGASLVVLASLIIFRREIYHKQK 265
>gi|294507694|ref|YP_003571752.1| conserved hypothetical protein, membrane [Salinibacter ruber M8]
gi|294344022|emb|CBH24800.1| conserved hypothetical protein, membrane [Salinibacter ruber M8]
Length = 314
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/269 (11%), Positives = 79/269 (29%), Gaps = 14/269 (5%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+ + P+ ++ V L + R + + + + + + V
Sbjct: 14 LGVLSFAFAPILVRWAGDVPGLAIAVWRTVTAAAVLIPVAAA----RTAPELRRLTRRDV 69
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ + L +H+ +I +L S +P+I LG +FL ERL ++A
Sbjct: 70 MLTGAAGVFLGLHFIAWIESLYHTTVASASVLVTTSPIILAALGYLFLGERLRRGTVVAI 129
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSA----------YCFARKTIPVGSSEGFFIEMC 201
+ + ++ + A+ +A +
Sbjct: 130 GIAVGGAGLIGWADAGTVALGQGALLGNALALSGALLVSVYLLIGRVVRQKVSWLAYVTP 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A+ AL + G + F+Y ++R + VG+
Sbjct: 190 LYAVAALTALAAAVLRGVPLTGYSWSFYAVCAGLALGPQVLGHGSFNYALQRVPAALVGM 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ P+ + + + + +
Sbjct: 250 LALLEPVGTSLLAYGLFGEVPPPASIVGM 278
>gi|229114177|ref|ZP_04243598.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock1-3]
gi|228669197|gb|EEL24618.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock1-3]
Length = 310
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 102/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNKNRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGVFILSILLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFQKRKFPASIQLLAIITALTGTYFIITNGSIENIVLSKSAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSITWLNESFGSYQLLGGVCIVLSVIFLTMPQ 298
>gi|138896845|ref|YP_001127298.1| hypothetical protein GTNG_3208 [Geobacillus thermodenitrificans
NG80-2]
gi|196250421|ref|ZP_03149113.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
gi|134268358|gb|ABO68553.1| Putative membrane protein [Geobacillus thermodenitrificans NG80-2]
gi|196210080|gb|EDY04847.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
Length = 312
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 93/297 (31%), Gaps = 15/297 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG+ + L E S + + + R+ + V + +
Sbjct: 7 YALLVGIMVAWGLNVTALKILVEHFSPVTLTALRIFTAGVVVLLFLWGIGRLGKVGWKEA 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M A + L + P+++ L VFL +R
Sbjct: 67 KQIGLAAMFSVVAHHFFLA-----VGLTRTTAVNAGLVLGMVPLVTALLAMVFLGQRPTM 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+++ L ++ + + L L++ + + I + ++ V+
Sbjct: 122 FRLLGIALGFFGVMFVVANGNGGLGHLSVGDVYVFLAVLAQGISFIMIKKATVDARVMTG 181
Query: 206 PALFYVVWNGFSGGEHFFL---------GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + F G + T+FL + + ++ ++
Sbjct: 182 WMLIFGSLWLFVLGLVLEPRGLSSLKEGTPLLWTIFLASAVVATALGHMFYNQAVQHLGP 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + P ++ + ++L +P+ + + F ++V +V+ S + +
Sbjct: 242 AESAVFINLNPFFSLLGAHWLLDEPVSWAQGLGFVLIVAGVVLGSGGMDDVSARFRR 298
>gi|90961827|ref|YP_535743.1| drug/metabolite exporter family protein [Lactobacillus salivarius
UCC118]
gi|227890852|ref|ZP_04008657.1| drug/metabolite exporter family protein [Lactobacillus salivarius
ATCC 11741]
gi|90821021|gb|ABD99660.1| Transporter, drug/metabolite exporter family [Lactobacillus
salivarius UCC118]
gi|227867261|gb|EEJ74682.1| drug/metabolite exporter family protein [Lactobacillus salivarius
ATCC 11741]
Length = 310
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 89/301 (29%), Gaps = 11/301 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+S M G + A WGI+ QF+ + +S R L S +
Sbjct: 3 SSSKVMKGIFWSAVASATWGISGTTIQFISQNQHIPTDWFLSTRTLGSGTILLIISFILY 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + ++ L + F A+ + + +++P+ V G
Sbjct: 63 G-KKTFNVFSTWKSFGHLFAYATLGLMANLLTFYLAIQSGNASAATILQYLSPLFIVLGG 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTI 188
+R +IA ++ +L +L+ + + +A +
Sbjct: 122 IFIKHQRPLSTDLIAFIISLLGVLLAITKGDLTQMSIPMNSFLWGLGSGITAAFYVVLPR 181
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
P+ + + A + + + F +
Sbjct: 182 PIAQDNPPLVVLGWGTFIAGVLFNIYHPVWINTPHITSTVVLSISTVILVGTIIPFGLLL 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y + A + IM+ P+ + SV L ++ V + +V++A+ +
Sbjct: 242 YSSRFAPSDVISIMDALQPVTTSILSVIFLGLEMNWVEIVGIILVIVAIYILQRGRRNME 301
Query: 309 G 309
Sbjct: 302 K 302
>gi|153954828|ref|YP_001395593.1| transporter protein [Clostridium kluyveri DSM 555]
gi|219855287|ref|YP_002472409.1| hypothetical protein CKR_1944 [Clostridium kluyveri NBRC 12016]
gi|146347686|gb|EDK34222.1| Predicted transporter protein [Clostridium kluyveri DSM 555]
gi|219569011|dbj|BAH06995.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 300
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/296 (8%), Positives = 82/296 (27%), Gaps = 5/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + + +WG+ + + E + R + ++YFS
Sbjct: 1 MKKQELKSNILLLITAAIWGLAFVAQKVGAEYIGPFAFNGIRFALGGISLIPLLLYFSKT 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + L + ++ V + S+
Sbjct: 61 QNQTINNCNKKYTFIIAGIITGCVLFLGASLQQIGLNYTSAGKAAFITGLYMVFVPIISI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
F K+ + ++ ++ + L ++ L I + A +
Sbjct: 121 FFKKNIPLTIWVSVVMTAIGLYFLSIKENFSISQGDLLEIIGALFWALHILAIDYFIKKI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + ++ ++ + L G + + G K
Sbjct: 181 DALKLSFVQTLTCSILSIIASLIFEKTAISSIYSALIPILYGGIFSVGIAYTLQIVGQKH 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A+ S I+ + + + +L + + + +++ M++ + N+
Sbjct: 241 ARPSHAAIILSMESVFATLGGMILLNEHLQLREYLGCFLMLSGMLLSQVSNFNNTK 296
>gi|254464428|ref|ZP_05077839.1| membrane protein [Rhodobacterales bacterium Y4I]
gi|206685336|gb|EDZ45818.1| membrane protein [Rhodobacterales bacterium Y4I]
Length = 301
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 89/294 (30%), Gaps = 1/294 (0%)
Query: 24 MMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+ L A L+ ++ + + V E + R +++P + + L
Sbjct: 1 MLAVLLKVTAIALFTALSGIIKATSDTVPAGEAVFFRSFFAIPVIVIWLAARRELRHGLI 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
LV ++ + G + L + F + ++FLG R
Sbjct: 61 TKKPMFHVWRGLVGTSAMGMTFMGLALLPLPEVTAIGYATPIFTLILAALFLGETIRMVR 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++ + I ++I+ + + + V + I + +
Sbjct: 121 ISAVAIGLLGVLIMIWPRLGGDLEDGAMLGVLLVVGATVARGFVQIHIRRMVQSEHTAAI 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ +L + + + + L+ GL+ + + + A S +
Sbjct: 181 VFYFSLTASGLALLTAPFGWVMPDAQTAALLVSAGLVGGVAQILVTSSYRFAPASMLAPY 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+Y + + IV + V +V+ V+ + + ++
Sbjct: 241 DYASMIFAIVIGYVWFDEWPTLVMLGGAVLVIAGNVLVIWREHRLGLQRGKDRA 294
>gi|187250668|ref|YP_001875150.1| drug/metabolite transporter (DMT) superfamily permease
[Elusimicrobium minutum Pei191]
gi|186970828|gb|ACC97813.1| Permeases of the drug/metabolite transporter (DMT) superfamily
protein [Elusimicrobium minutum Pei191]
Length = 305
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 85/292 (29%), Gaps = 9/292 (3%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F + + W +T + + L + V ++ R + L V + F +L K
Sbjct: 3 YIKLFASILFWSLTFYFVKTALAECGVTTLVFARSVLGLLVVTLFLREFKWLKTLTKKDW 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ M+ + + + FV + F K+++
Sbjct: 63 LRFFFLAMVGVVIQQNVQGYATMHTSTNHAGWLVALSPIFVAFTMVAFFKERLPKDKMMG 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I ++++ L T G + +
Sbjct: 123 FIICILGVLLIFLSKQTFVDGSSMSTLKGDLIFVATAVNWVFYVVPMSIWFKNMPNLRIT 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + A+ + + S + +G + + F F ++ GI++ S
Sbjct: 183 FCLFLAAVTIMLPIEIVSGSLKDFAHMGPRALSALAYLGIFCSGFAFIFYNEGIEKIGPS 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y PL +V +L + I I +++ + + +
Sbjct: 243 KASAFIYAQPLFTMVFGYILLGEVISKEAFIGGALILCGLYLINVRRKRLKR 294
>gi|15965957|ref|NP_386310.1| hypothetical protein SMc02817 [Sinorhizobium meliloti 1021]
gi|307308268|ref|ZP_07587977.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
gi|307319735|ref|ZP_07599160.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|15075226|emb|CAC46783.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306894666|gb|EFN25427.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|306901266|gb|EFN31872.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
Length = 317
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 96/294 (32%), Gaps = 16/294 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + +L + ++++ + V E+ + R L + + ++
Sbjct: 19 GLTLMVLSVLLSPLIDIFSKLAIATVPSAEITAARFLLQIVFILPIVLVRG------TLF 72
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + +L V FI L + +FV P+I LGS+FLKE +
Sbjct: 73 DLTWRKSALHALRGGLLVVTMLSFITTLKVMEVADAIAIFFVEPIILTILGSIFLKETIG 132
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLL---------SLAIAVTWSAYCFARKTIPVGSSEG 195
+ A + L L++ S + + +AV + S +
Sbjct: 133 WRRYTACAVGFLGSLLVIQPSMQEVGLVALLPIVAAFGLAVFLLVTRMVAQNEDPWSMQF 192
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L AL + S + +L+G G+ + + Y + A
Sbjct: 193 HAGIWGGLFCLALLWFGEGSGSSVFDPVWPDGRAWYYLLGVGVTATISGVLGVYAYRAAP 252
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S + ++Y + + + D ++ + I++ + + +
Sbjct: 253 ASVLAPLQYLEIVSATIFGWLVFGDLPDALKWLGIAIIIGSGLYIIWRERQVQK 306
>gi|257791045|ref|YP_003181651.1| hypothetical protein Elen_1293 [Eggerthella lenta DSM 2243]
gi|317488237|ref|ZP_07946806.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
gi|257474942|gb|ACV55262.1| protein of unknown function DUF6 transmembrane [Eggerthella lenta
DSM 2243]
gi|316912679|gb|EFV34219.1| integral membrane protein DUF6 [Eggerthella sp. 1_3_56FAA]
Length = 331
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/301 (8%), Positives = 70/301 (23%), Gaps = 17/301 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G L LWG + QFL ++ + + R+L + ++ +
Sbjct: 13 RRRHLRGVLCALTGAGLWGFSGACAQFLLANYDITPSFITAVRMLGAGAVFLLVLLVRNR 72
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + VF L + + + + +
Sbjct: 73 AQLAAMLGDR-RTLGQLAVFGGVGLFLCQITYTIVIGYTNAGTATVLQTTGIAFVMLFTC 131
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKTI 188
V + ++ +++ ++ L L + A+
Sbjct: 132 VLTRRMPRGREVTGLAAAVIATWLIATQGDPSALYLPLMGLAWGIANGLSVAFYIMYPKK 191
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F + + I + L V +
Sbjct: 192 LFARWGSFAVTGIGMFIGGIVAAAVYFSGVALGEPLALPALDAAGAAVFAAFVLVGTFAA 251
Query: 249 YGIKRAKLSTV-----GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + +S V ++ P+ + + L +++ + +
Sbjct: 252 FALYLHGVSVVGSVQGSLLGAVEPVSATLFATLWLGTAFTGADLAGCALMIAMIFLVTGE 311
Query: 304 T 304
Sbjct: 312 K 312
>gi|270290108|ref|ZP_06196334.1| DMT family permease [Pediococcus acidilactici 7_4]
gi|270281645|gb|EFA27477.1| DMT family permease [Pediococcus acidilactici 7_4]
Length = 303
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 91/297 (30%), Gaps = 11/297 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFA 70
+ + G + A +WGI+ Q + Q + +S R + +
Sbjct: 1 MENNLTNKQVGKGIFWALIASCMWGISGTVLQVISQGESIPASWFLSARTSGAGV-LLLI 59
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
I + + + + + ++ L + F ++ + +++P+
Sbjct: 60 ISFIKYQMHIFDVFKSLRTVLWLFAYAIFGLMANLLTFYMSVQEGNASAATILQYLSPLF 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCF 183
V +F ER +IA ++ +L + + H L I +A +
Sbjct: 120 IVLGSLIFKHERPMRSDLIAFVIAMLGVFLAITHGNIHSLAISNSALIWGILSGVTAAFY 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
P+ I + I + + +
Sbjct: 180 VVLPKPITKDHSPMIVLGWALIIGGILFNIHQPVWVNTPEITTRLVLSMATVILVGTILP 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F + + A + V I++ P++ V S+ L + I +V++A+ +
Sbjct: 240 FWALLHSLNFAPSAVVSILDAVQPVVTFVLSLLFLNLKFNITELIGSILVIVAITII 296
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 38/137 (27%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
++ + + + +S + L F
Sbjct: 22 CMWGISGTVLQVISQGESIPASWFLSARTSGAGVLLLIISFIKYQMHIFDVFKSLRTVLW 81
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
F ++ S I++Y +PL +++ S+ + I F
Sbjct: 82 LFAYAIFGLMANLLTFYMSVQEGNASAATILQYLSPLFIVLGSLIFKHERPMRSDLIAFV 141
Query: 292 IVVIAMVVYLLPTVINS 308
I ++ + + + I+S
Sbjct: 142 IAMLGVFLAITHGNIHS 158
>gi|154493566|ref|ZP_02032886.1| hypothetical protein PARMER_02906 [Parabacteroides merdae ATCC
43184]
gi|154086776|gb|EDN85821.1| hypothetical protein PARMER_02906 [Parabacteroides merdae ATCC
43184]
Length = 306
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/304 (11%), Positives = 88/304 (28%), Gaps = 22/304 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + + IL+ + +++L V + R+ ++ + ++
Sbjct: 1 MNSEKLKGHILILITNILFAVNMPISKYLLPAHVPPEGLTIMRMAFACVMFWIVSLFTVK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LKD + V + + ++ G FI L S P+ + L +
Sbjct: 61 EKVPLKD------LGMLFVCALCGVGINQGLFIVGLNRSSPVDASIIATAVPIFVLLLAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG- 195
V LKE + + + + L++ S + S++ + +
Sbjct: 115 VILKEPITRKKSFGVFMGVSGGLLLVFSSTHAIDSISSLDGDMMMIVSGLMYAIYLVLSK 174
Query: 196 -------------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ L + +
Sbjct: 175 PLSLRYSSVTMMKWMFLFTTLTLVPFTFRHVLDAPAFHREVWDFTELGAIFYVLFGATFL 234
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + +KR + +TV + Y P++ +V I + + + + +V + +
Sbjct: 235 PYLLIPMSLKRIRPTTVSMYNYVQPIVASFIAVMIGQDTLSWQKVLSAVLVFTGVYLVTQ 294
Query: 303 PTVI 306
Sbjct: 295 SKSR 298
>gi|71280887|ref|YP_269156.1| rarD protein [Colwellia psychrerythraea 34H]
gi|71146627|gb|AAZ27100.1| rarD protein [Colwellia psychrerythraea 34H]
Length = 289
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/285 (20%), Positives = 118/285 (41%), Gaps = 1/285 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+F + +++ + P Y QFL V + S RVL L F +V + LK PK
Sbjct: 1 MFGSILIFSLLPYYIQFLAPVDGNTLFSFRVLSQLGFGFLFLVLTRQLFA-LKAVFVQPK 59
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +L ++ ++A+ W F + + + + YF+ P+ G + KE+L+ L +
Sbjct: 60 ELLLLCLTSPLIAIQWWIFFWGPVNGETINIAMGYFLLPITISLTGRFYFKEKLSPLLWL 119
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
A ++ + + S + F + + F+ + P
Sbjct: 120 AVGAALIGVSVELYRSHSFSWVTLLICLAYPPYFILRRKSKIPTTSNFVAENIFVTPLAL 179
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+++ F L L+G GLL + F R K + G++ Y P+L
Sbjct: 180 LLLYFTHQQQLPFLPSLDWGILLLLGSGLLGTVAMLFFVSASTRLKFTIFGMLNYGEPIL 239
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
M++ ++F+L + I + +G IA+++ + +++ ++ K
Sbjct: 240 MMLVAIFLLNEVISPEQLWSYGFFGIAVLLVIGDSLLRIIISRKK 284
>gi|107025919|ref|YP_623430.1| hypothetical protein Bcen_3563 [Burkholderia cenocepacia AU 1054]
gi|116692898|ref|YP_838431.1| hypothetical protein Bcen2424_4804 [Burkholderia cenocepacia
HI2424]
gi|105895293|gb|ABF78457.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia AU 1054]
gi|116650898|gb|ABK11538.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia HI2424]
Length = 331
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 89/290 (30%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P +F +
Sbjct: 23 KTRLIGYLYLAAAMAGVGSTVIASRLAAGGLPPFAATALRFLIATPLLFALMRAQHMCWP 82
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ AV +++ +A + I P +S + +V L
Sbjct: 83 RISA----RDAVLLVIQAAAGGVGYTVLLISGTKLSSPLDAGVMLGTLPAMSTLIAAVVL 138
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
+ER +AA L +L +T G + SL AV A
Sbjct: 139 RERQTPRDWLAAALATAGVLFVTFAPGHAMPSLQTLAGDALVLAAVACEAVFILLNRRLA 198
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF-LGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + +V F + + + + +
Sbjct: 199 APVPPLALSTAMSGLGFVLALVPAAFEWQAVASGWTVGAVSAIVYYALIPTVLGYLCWYA 258
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + R +VV M+V
Sbjct: 259 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLTGTRVAGISLVVAGMLV 308
>gi|302386815|ref|YP_003822637.1| protein of unknown function DUF6 transmembrane [Clostridium
saccharolyticum WM1]
gi|302197443|gb|ADL05014.1| protein of unknown function DUF6 transmembrane [Clostridium
saccharolyticum WM1]
Length = 310
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 98/309 (31%), Gaps = 20/309 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L + +WG T + T+ LE + LE++ R L ++ A
Sbjct: 3 KQNHLYGHLAAGFSIFVWGTTFISTKVLLEAFTPLEILFFRFLIGYAALWLAC------- 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L T + V + +++ +AL S V P + +F
Sbjct: 56 PRLLHTKNRTQEVLFAAAGLCGVTLYFLMENFALTYTLAANVSVIIAVAPFFTALFDWLF 115
Query: 139 -LKERLNHLQIIAALLIILSLLIMTLHSGIPL-----------LSLAIAVTWSAYCFARK 186
E+ + L I+ + +++ + + +S
Sbjct: 116 LKGEKPGPRFLAGFLTAIMGIALISFQKSSGMKLNPKGDFLALAAAMTWAAYSVITRKIG 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
G+ E + + + F G + L ++ F
Sbjct: 176 EYGHGTVETTRRIFFYGLLFMIPALAVLPFHTGLYRLADTKNLFNILFLGLGASALCFAT 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+++ +K + Y P++ +VSS+ +L++ I + + ++V T
Sbjct: 236 WNFAVKELGTVKTSVYIYAVPVITVVSSMLLLRERISFQSACGIVLTLAGLMVSESRTQS 295
Query: 307 NSGKNKTKK 315
+ + + +K
Sbjct: 296 HGFRLRCRK 304
>gi|221195934|ref|ZP_03568981.1| integral membrane protein DUF6 [Burkholderia multivorans CGD2M]
gi|221202607|ref|ZP_03575626.1| integral membrane protein DUF6 [Burkholderia multivorans CGD2]
gi|221176541|gb|EEE08969.1| integral membrane protein DUF6 [Burkholderia multivorans CGD2]
gi|221182488|gb|EEE14888.1| integral membrane protein DUF6 [Burkholderia multivorans CGD2M]
Length = 316
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 86/290 (29%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G ++ A G T + ++ + + R L + P + +
Sbjct: 2 KTRLIGYFYLAAAMAGVGSTVVASRVAAGGLPPFTATALRFLIATPLLLALM----RMRR 57
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L AV +++ +A + I P +S + +V L
Sbjct: 58 LRWTRPSTRDAVLLVIQAAAGGVGYTVLLICGTKLASPIDAGVMLGTLPAMSTLIAAVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPV 190
+ER +AA L +L +T G + SL AV A
Sbjct: 118 RERQTRRDWVAAALATSGVLFVTFAPGHAMPSLRALVGNALVLAAVACEAVFILLNRRLT 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSG-GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + A+ + ++ F + + + +
Sbjct: 178 APLPPLTLSAAMSALGFVLALIPAAFEWRAVVSGWTFGAVSAIAYYALVPTVLGYVCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + R +VV ++V
Sbjct: 238 GSARTSGTEAALFTAIAPVSAVLFAVALFGDALTATRLAGIALVVAGVLV 287
>gi|221640110|ref|YP_002526372.1| DMT superfamily transporter [Rhodobacter sphaeroides KD131]
gi|221160891|gb|ACM01871.1| transporter, DMT superfamily [Rhodobacter sphaeroides KD131]
Length = 287
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/285 (10%), Positives = 89/285 (31%), Gaps = 8/285 (2%)
Query: 27 TLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L++ + + + G+T + + + R + + +V +
Sbjct: 1 MLWMLASGVSFVGVTGIVRHLGTDIPAAQGAFLRFAFGALFLLPTLV-------PVLRQG 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + F+ +A+ + ++ PV+ ++F ERL
Sbjct: 54 VPMSTLKLYGLRGAFHTAAVIFWFFAMARIPVAEVTAIGYLNPVLVTVGAALFFSERLAL 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+I+A + ++ LI+ L + ++ +A FA + ++A+
Sbjct: 114 RRILAVAVALVGALIVLRPGLRELSAGHLSQLCAATLFAGSYLLARRLSDVAGAGPIVAM 173
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + + + L+L + + + A L+ + +
Sbjct: 174 MSATVTLGLLPFALLVWVPVGVDQLLWLALVAVFATVGHYCMTRAFGVAPLTVTQPVTFL 233
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L + + +D + GI++ A+ + +
Sbjct: 234 QLLWATLLGALAFGERVDPFVLLGGGIIISAISYITWRESVLKRR 278
>gi|239828503|ref|YP_002951127.1| hypothetical protein GWCH70_3205 [Geobacillus sp. WCH70]
gi|239808796|gb|ACS25861.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
WCH70]
Length = 306
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 91/283 (32%), Gaps = 15/283 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F+ ++WG+ + + L E S + + S R+ + V +++ L +
Sbjct: 7 YIFLVLIMMIWGLNVIAIKILVEHFSPVTLTSFRIFTAGIVVILILLFMGQLRKLTWKEV 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ A L + L + P+++ L ++FL RL
Sbjct: 67 MYIGIAALFSVVAHHLFLA-----LGLTKTTASNAGLILGLIPLVTSVLAAIFLGNRLTV 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + L + + L+ + ++I + + I + ++ V+
Sbjct: 122 FRFVGIFLGFAGVAFVVLNGKSGIHHVSIGDFYVFLAVLSQAISFIMIKKATVDARVMTG 181
Query: 206 PALFYVVWNGFSGGEHFFLG---------NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + F +FL + ++ I+
Sbjct: 182 WMLLFGSLLLFFISLWMEPNGLSSLAGGTPSLWMIFLASAVFATALGHMFYNQAIQHIGA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I PL ++ + L + I + I F ++V+ +V+
Sbjct: 242 VESAIFINLNPLFSLLGAYLFLGESISHTQMIGFILIVLGVVL 284
>gi|78046208|ref|YP_362383.1| drug/metabolite transporter superfamily protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325928909|ref|ZP_08190071.1| putative permease [Xanthomonas perforans 91-118]
gi|78034638|emb|CAJ22283.1| drug/metabolite transporter superfamily protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325540705|gb|EGD12285.1| putative permease [Xanthomonas perforans 91-118]
Length = 291
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 98/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L F Y + I+ + + LE + + VL+ + V F +
Sbjct: 2 LKGVLLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPNDQLR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L +FLKE +
Sbjct: 58 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEV 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 118 HWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVIALRMAGHSEKRLTLY 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V G F + L GYGLL Y + A +S V +
Sbjct: 178 GAGVIGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSLVAPTQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 289
>gi|83953295|ref|ZP_00962017.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83842263|gb|EAP81431.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 302
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 84/294 (28%), Gaps = 5/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S +G + +++ + ++ L + +V+ V+ R + V +GG
Sbjct: 13 QSNNIPLGITLMVITTLVFAVQDGLSRHLASEYNVMMVVMIRYWFFAAFVIALAKRHAGG 72
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + +F +LA I A + + P++ L
Sbjct: 73 LRAA----ARTSQPVLQIFRGLLLAAEICVMIVAFTILGLVESHAVFTCYPLLVAALSGP 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E + + A + + +LI+ A+ +A FA +
Sbjct: 129 VLGESVGWRRWAAIGVGFIGVLIILQPGMSVFDPAAVIPLVAAAMFAVYGLLTRYVGRKD 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ V +G ++ D L + + + + A+ S
Sbjct: 189 KTATSFFWTGVTGSVAMTATGLWYWEPMIASDWLIMGCLCITGVTGHWLLIRCYEVAEAS 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V Y + + + + + I ++V A +
Sbjct: 249 AVQPFAYLQLVFAAIIGISAFGETVRPNVAIGAALIVAAGLFTFWRERQKGRAR 302
>gi|298247264|ref|ZP_06971069.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297549923|gb|EFH83789.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 353
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 94/287 (32%), Gaps = 13/287 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G L ++WGI L+ + ++++ + V+ RV + + V G L L
Sbjct: 37 TRKGWLLFTAMSVIWGIPYLFIKIAVQELDPIVVVFARVGIAALALLPVAV-HQGVLRRL 95
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ A+ + + L + +G + A ++ +F E
Sbjct: 96 RERWLTVAALACVQIAGPFLLISYGEQLIASSLTSL----LIAADPLLVVLFALRFDPSE 151
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R++ ++I L+ + ++ + + + T A + I
Sbjct: 152 RVSGSRLIGLLIGLGGVVTLLGLDAGGDMQQLLGATLVLLAAAGYAAGALLIKRPTIAAL 211
Query: 202 VL-------AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I A + + L+ + + + +F +
Sbjct: 212 PSLGVVTVECITATVVLAPLAVTRLPSRIPDLEVIASLLVLGLICTALAYLLFFALVAEV 271
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ Y P + ++ V +L +P++ V F ++++ +
Sbjct: 272 GAGRGSVITYVNPAVSVLLGVTLLAEPLNAVIIAGFLLIIVGSWLST 318
>gi|167625235|ref|YP_001675529.1| hypothetical protein Shal_3324 [Shewanella halifaxensis HAW-EB4]
gi|167355257|gb|ABZ77870.1| protein of unknown function DUF6 transmembrane [Shewanella
halifaxensis HAW-EB4]
Length = 309
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 105/295 (35%), Gaps = 10/295 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M G L++F A +L + + ++ + Q E+ + ++V L
Sbjct: 1 MRGVLYLFIATLLAAVGWVASKIVVQSMPGEL-----FIGSRFLLASLVLLPFCYKSLLK 55
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
V LA+ + ++ +F + +I+ + + +
Sbjct: 56 LSMKQVLSACGVGVFLGLALQ-VWIYAVSISDSLSEGAFIMSLAMIIAPLTAWLLFQVKP 114
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG----FFIE 199
N IA + I +++++L +G + + + ++ + + G
Sbjct: 115 NRAFWIALPVSITGMMLLSLTNGWRMEASQLLFLLASALLSVHFVMNKRISGNLKPLVSI 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L + L +++ F+ + F I + S + + + G + + T
Sbjct: 175 CLQLFVVGLVGLMYAAFTQPHTIGFSSNLIIWFAISTLIATSVRYLLQTMGQYKVSMETA 234
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ P+ + SV++L + I+ + I ++ ++ VY+ + + + K
Sbjct: 235 ALLMILEPVWTMFLSVYMLGETIEPQKLIGGLFILSSLFVYIKLSRREAKAVQAK 289
>gi|189424372|ref|YP_001951549.1| hypothetical protein Glov_1308 [Geobacter lovleyi SZ]
gi|189420631|gb|ACD95029.1| protein of unknown function DUF6 transmembrane [Geobacter lovleyi
SZ]
Length = 308
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 83/289 (28%), Gaps = 13/289 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F+ WG + L+T+ + +V + R + + + +
Sbjct: 20 LFFLVLTTFFWGGSFLFTKIGVREVPPPFFVLLRFSLASVVMGLLCL--------PRLGR 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
N + + L + F+ + + + + + K+R+
Sbjct: 72 LNRQTILRGTIVGLALGITNLTFVVGVQGTSISRAGVINNLFVLFIPLIARIAWKDRIGG 131
Query: 146 LQIIAALLI----ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L L + + + A + + + + +
Sbjct: 132 INTAGIGLASLGIALLAGGGGEGFNRGDMISTLCAFFIAIHIITVSRVLKDEDVWLVSFV 191
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ AL V F LG + L F + + + + G+
Sbjct: 192 QFCVVALMAAVITLVVPTPPFSLGLTSLATIIYCAILPTVVCFTLQNRYQRYVTPTQAGL 251
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ +++ +L + + T G++ +A+++ L +
Sbjct: 252 IYTLDPVWSLLAGFAVLGERLTTREWYGCGLIFLAVLIPLGIRFAIERR 300
>gi|71733771|ref|YP_274321.1| hypothetical protein PSPPH_2102 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71554324|gb|AAZ33535.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320324269|gb|EFW80348.1| hypothetical protein PsgB076_12434 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320328608|gb|EFW84610.1| hypothetical protein PsgRace4_19163 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 295
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 82/287 (28%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F+ A L+ +++L + ++ + I S GL +
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVWARYVVHTLLMACIFMPSAGLRV 71
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +A+ L T L F+ P++ L L
Sbjct: 72 LRTKRPGLQALRALALLGTSLLFTSSLMFIPQAEATA-----VNFLAPLLVTALSVPLLH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A ++ + ++I+ G + SA CFA + F
Sbjct: 127 ERVTRGQWVAVVVGFIGVMIIIHPGGELFTPAILLPLSSALCFALYLLLTRLVSPFDSPT 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LF + + + + FL+ G + + + A + +
Sbjct: 187 TSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAMLA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ +
Sbjct: 247 PFSYCQIVFAGLLGFVVFDHMPSPTAQAGIAIICLSGLAAAWQQRRK 293
>gi|42779395|ref|NP_976642.1| hypothetical protein BCE_0314 [Bacillus cereus ATCC 10987]
gi|42735311|gb|AAS39250.1| membrane protein, putative [Bacillus cereus ATCC 10987]
Length = 306
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 104/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLL----FSFKQLKRSVVH 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 60 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIKL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
+ +L + +L++T+ S +++ A+ ++ + +
Sbjct: 120 NYWVGIVLGAIGVLLITIPSSNGDQEVSLIGDTLILLSTFLFALYTVLLKRPKQEQYLSN 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + +++ ++
Sbjct: 180 KVFTTLTLIIGAVILLPFAMVETFYYGFPEIETWKTGFSVMYLVIGATILAYWLWNRALE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 240 TVSASVSGLYLNALPLISIVASIVLLDESVTWKIVIGGSLVLIGV 284
Score = 41.0 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ +P
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLLFSFKQLKRSVVHKQVP 63
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I +
Sbjct: 64 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIKLNYWV 123
Query: 289 VFGIVVIAMVVYLLPT 304
+ I +++ +P+
Sbjct: 124 GIVLGAIGVLLITIPS 139
>gi|262066152|ref|ZP_06025764.1| integral membrane protein [Fusobacterium periodonticum ATCC 33693]
gi|291380127|gb|EFE87645.1| integral membrane protein [Fusobacterium periodonticum ATCC 33693]
Length = 301
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 91/295 (30%), Gaps = 11/295 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L F LWG+ + +L + V+ +I +R++ + + +Y+ G +
Sbjct: 8 GMLSTFVGGTLWGVNGVMGNYLFLNKNVTTPWLIPYRLILAG-FLLLGYLYYKKGSKIFD 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L+F + + A+ + + + P + + + K +
Sbjct: 67 ILKNPKDLAQILLFGLIGMLGTQYTYFSAIQFSNAAIATVLTYFGPTLVLIYMCLREKRK 126
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++++ L + ++ H L I S + + + G
Sbjct: 127 PLKYEVVSICLSSFGVFLLATHGDITSLQISFKALIWGILSALSVVFYTVQPESLLKKYG 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + ++ + + + ++ F ++ G+
Sbjct: 187 ASIVVAWGMMIGGIFIAFVTKPWNISVTFDFVTFLVLMLIIVFGTIIAFILYLTGVNIIG 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ P+ + ++ L + I F ++ + + K
Sbjct: 247 PTKASIIACIEPVAATICAILFLGVSFGFLDLIGFICIISTIFIVAYFDKKVKKK 301
>gi|117929298|ref|YP_873849.1| hypothetical protein Acel_2091 [Acidothermus cellulolyticus 11B]
gi|117649761|gb|ABK53863.1| protein of unknown function DUF6, transmembrane [Acidothermus
cellulolyticus 11B]
Length = 301
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 83/290 (28%), Gaps = 6/290 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L ++WGI L + + ++ R + V LL
Sbjct: 2 SRRGWLLFGAMGLIWGIPYLLIRVAVRDFPPGTLVFARTAVGAALLTPLAVRRRALPPLL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
V A + + + G L + + +I FL E
Sbjct: 62 SRW--RIVLGYTAVEIAIPWLLLSEAEVRLSSSLAGLLIASVPLIGAIILAFLPHDRHDE 119
Query: 142 RLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
RL +II + I + ++ L S + + VT Y I S +
Sbjct: 120 RLTTTRIIGLAIGISGVGLLMGVDLSSRDVWSVVEMCVTAIGYAIGPIIIARRLSTLPSL 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++ + + + F +F I
Sbjct: 180 GVVTASLLITAVAYAPYAVTHWPAHVSAAAGWSVAGLGVICTAIAFLLFFALIDEVGPGR 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ Y P + ++ V +L + + F ++++ V+ ++
Sbjct: 240 ATVITYVNPAVAVLLGVGVLGERFTLGIALGFPLILLGCVLATRRAGRSA 289
>gi|257126454|ref|YP_003164568.1| hypothetical protein Lebu_1707 [Leptotrichia buccalis C-1013-b]
gi|257050393|gb|ACV39577.1| protein of unknown function DUF6 transmembrane [Leptotrichia
buccalis C-1013-b]
Length = 351
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 79/292 (27%), Gaps = 6/292 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
M + A I + I +++ L +V + S L + GV ++
Sbjct: 3 KSRKFMAVILALLAAIFYAINTPFSKVLLNKVPPTLMASFLYLGAGTGVGIMYLFRRKVE 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + + F + + S V + + +
Sbjct: 63 EKYEKLNKADLPYTIGMIVLD--IAAPIFLMIGINIGSASNASLLGNFEIVATTIIALLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSEG 195
KE++ IA I +S +++++ ++ S+
Sbjct: 121 FKEKVTSKLWIAIGFITVSSIVLSVEGAESFQFSLGSLFVILATCCWGLENNCTRKISDK 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E+ L + L+ + ++ +
Sbjct: 181 STYEIVFLKGFFSGGGAFIVALILGERIPEMKYIIAALLLGFVAYGLSIFMYIRAQRDLG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ AP + + + + + V I ++I V+ + T++
Sbjct: 241 AAKTSAYYAIAPFVGTFLAFIVNGEKLTLVYFIGLVFMIIGSVIVVYDTMVK 292
Score = 40.7 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 6/166 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G+LFV A WG+ T+ + S E++ + +S G F + + +K
Sbjct: 155 LGSLFVILATCCWGLENNCTRKISDKSTYEIVFLKGFFSGGGAFIVALILGERIPEMKYI 214
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + +I A TS Y + P + FL + E+L
Sbjct: 215 IAALLL------GFVAYGLSIFMYIRAQRDLGAAKTSAYYAIAPFVGTFLAFIVNGEKLT 268
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ I + +I+ +I+ + + S + + V
Sbjct: 269 LVYFIGLVFMIIGSVIVVYDTMVKYHSHSHSHIIVHTHDGTTHKHV 314
>gi|218509235|ref|ZP_03507113.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
Length = 287
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 82/284 (28%), Gaps = 5/284 (1%)
Query: 32 CAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A ++ + ++ L + V R GGL T +
Sbjct: 2 LAITIFSLQDAISKHLASTYPPIFVTMIRYWTFALFTIVLASKMRGGLKATARTKRPL-- 59
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ V +LAV I + + TP++ L L ER+ + A
Sbjct: 60 --LQVVRGVLLAVQVVLGITCFAVIGLARSQAIFSATPILIALLSMPILGERVGWRRWTA 117
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
++ + +L++ G + S + FA I + M +
Sbjct: 118 IVVGLFGVLLILKPEGEFFDVKLLLAILSCFNFAFYVIATRLASRDDSSMTSFFYTGVIG 177
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ G ++ ++ D ++ + + + V + Y +
Sbjct: 178 AITMTAIGPFYWSWMSVGDWGWMALVCMTSISSHYFLIRAYDLLDAAAVQPLTYLLLVYA 237
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ V I + + I IVV A + + + +
Sbjct: 238 SIIGVTIYDETVSLNTIIGSIIVVAAGIFTVWREHVVGRRAAVA 281
>gi|254456066|ref|ZP_05069495.1| transporter [Candidatus Pelagibacter sp. HTCC7211]
gi|207083068|gb|EDZ60494.1| transporter [Candidatus Pelagibacter sp. HTCC7211]
Length = 296
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 90/295 (30%), Gaps = 6/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + +WG + ++ + L + R L + + F
Sbjct: 1 MTKSLSLICALVTTFIWGTAFIAQDTGMDNIGPLTFNAARFLVGFVAILPFALIFEKKKI 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + LVF L + +L +F + L
Sbjct: 61 ISQINLDRKRFIKYLVFMGFSLFLGTSLQQASLQYTNVANAAFFTVFYVPLVPILLFFLY 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++++ + L + + +++ S ++ V + +A I G F
Sbjct: 121 SQKVHWSIWPSIALCVYGVYLLSNFSDSEIMKGDALVILCSLFWAFHIIFAGKFMKIFDI 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDT-----LFLIGYGLLNSFVFCIFSYGIKRA 254
A +V F + + + L F + + K
Sbjct: 181 PMFYAALQAVFVATLSLITAYTFEDVVLSNILLESSSIIYAGVLSGGIAFTLQMFAQKNI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ + ++++ IL Q +D I ++++A++ L I +
Sbjct: 241 DEAPAAIIYSLEGVFAVIAAWIILNQILDIDNIIGCILILVAVIFSQLAPEIKNK 295
>gi|170690897|ref|ZP_02882063.1| RarD protein, DMT superfamily transporter [Burkholderia graminis
C4D1M]
gi|170144146|gb|EDT12308.1| RarD protein, DMT superfamily transporter [Burkholderia graminis
C4D1M]
Length = 296
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 56/291 (19%), Positives = 116/291 (39%), Gaps = 4/291 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---L 78
G A ++ + Y L +S L++ + R++W++PG +
Sbjct: 5 SPKRGIALSISACAMFALLSAYATLLAPLSGLDIFAWRIVWTVPGALLLVALRKRMPILR 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LL + P ++ +A +L F++A L + S YF+ P++ V +G +
Sbjct: 65 QLLYRMVTQPTLGLAMIAAAALLGAQLWVFLWAPLHGRMLEVSLGYFLLPLVMVLVGRFY 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ERL+ LQ A + + + +G + F + S F
Sbjct: 125 YRERLDGLQWAAVVSAAVGVGHELWVTGAFSWPTLLVALGYPPYFVLRRKIQYDSLAVFT 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+L +PA V +G S ++ L L G GLL++ + + ++
Sbjct: 185 VEMILLLPAAVAFVVSGGSLPLISGRIDM-WLLLLPGLGLLSTLALASYLTASRLLPVAL 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
GI+ Y P+L+++ S+ +L + + + + + IA+ + L ++
Sbjct: 244 FGILGYVEPVLLVLVSITLLGETLSAAQLATYVPIWIAVALTALHSMRFLR 294
>gi|54302739|ref|YP_132732.1| hypothetical protein PBPRB1060 [Photobacterium profundum SS9]
gi|46916163|emb|CAG22932.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 302
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 92/299 (30%), Gaps = 16/299 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G ++ + I + + + + + V E+++ R + SL + I K
Sbjct: 12 GVRYMLMSAIAFALMSSCVKLVSTYGIPVFEIVAARAVVSLIISYADI--------KRKR 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L+ ++ +A+ T + ++ PV + L VFL+ER+
Sbjct: 64 ISVWGNNKKLLIARGVAGSLALICVYFAVATLPLAEATILQYLHPVFTALLALVFLRERI 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIP------LLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
II + I+ LL+M A A A + V
Sbjct: 124 QLSTIICIVFCIVGLLVMVSPGLTFDSTAALPWLSVTAALLGALGSAIAYVIVKRLSSSE 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L + + G F + + L L+ G+ + ++ S
Sbjct: 184 DSSVIIFYFPLIALPLSVLFLGNDFVMPDTEALLLLLFVGISTQVGQIGLTKAMQTEVAS 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
Y + I+ + +++I + + + ++ S
Sbjct: 244 KATAYSYVQVVFSIILGWLFFSEIPSIWTWAGGTLIIIGAFINVFGNLKFKKLKTSQAS 302
>gi|239995453|ref|ZP_04715977.1| probable transmembrane protein [Alteromonas macleodii ATCC 27126]
Length = 294
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/296 (8%), Positives = 91/296 (30%), Gaps = 15/296 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +WG + ++ + + + +++ R + + + ++ + + L
Sbjct: 6 IISLLVLAGIWGGSFIFMRVAAPEFGIYVLVAIRTVLATAVLLPLLLIRGSVKDIKRHWL 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L Y+ L + + + P+ + ++L ++L
Sbjct: 66 AIALVGMANTAVPFVLF------NYSSLHLEAGVNAILNATAPMFGAIVAWLWLGDKLTK 119
Query: 146 LQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + + + +++ S +P+L+ +A T + + +
Sbjct: 120 SAVAGLFVGFVGVTVISQQKLGEGDISFLPILTALLATTGYGIAACMMKKWLQGVKPLVV 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
A+ ++ + + E + + ++ I +
Sbjct: 180 ATGSQAMASVMLAPFALATLPETM-PSVNAWVNAVALAVGGTGIAYILYFKLIADIGPAK 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y PL I+ V L++ + + +++ + + K K
Sbjct: 239 AITVAYLVPLFGIIWGVLFLQEHLSIQTIVGGLMILFGVALTTGVLKRKRLKVKPA 294
>gi|255505296|ref|ZP_05345276.3| integral membrane protein [Bryantella formatexigens DSM 14469]
gi|255268658|gb|EET61863.1| integral membrane protein [Bryantella formatexigens DSM 14469]
Length = 286
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 82/280 (29%), Gaps = 11/280 (3%)
Query: 32 CAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+LWG + Q+L QV + + R+L + + I + +
Sbjct: 2 TGAVLWGFSGACGQYLFTNYQVDSSWLTAVRMLTAGILLTLFI-FVKQKKCAVGIWRNKR 60
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
A+ ++VF+ L ++ A+ + ++ PV+ + L + + +
Sbjct: 61 DAMQVVVFAVCGLLFCQYAYLTAISYSNAGTATVLQYLGPVLIMILVCLRGRRLPTGREA 120
Query: 149 IAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
A +L +L ++ H + + + S C+ + G +
Sbjct: 121 TAVVLAVLGTFLLATHGNLSTMVLTEKGLLWGLIAAVSLACYTLLPARIIPKWGSMVVTG 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + L + ++ G+ +
Sbjct: 181 YGMLIGGVVLACGIRIWQIPVHLDIRGWLAVGGVAIAGTLVAYTLYLQGVGDIGPVKASM 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P+ + +VF L F ++ + +
Sbjct: 241 LASIEPVSATLLAVFWLGSSFGAFDLAGFVCIMTTVFLLT 280
>gi|163794968|ref|ZP_02188937.1| RNA polymerase sigma-54 factor [alpha proteobacterium BAL199]
gi|159179787|gb|EDP64314.1| RNA polymerase sigma-54 factor [alpha proteobacterium BAL199]
Length = 300
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/267 (12%), Positives = 81/267 (30%), Gaps = 7/267 (2%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
++ E+ RV + + + K V + + + A
Sbjct: 18 LSGEMHPFEIAFFRVFFGFVALAPVFMRQGWAPLQTK-------NVKLFAYRGLLNAAAM 70
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
F Y+L + F P+ + L + L E + + A L+ LI+
Sbjct: 71 LMFFYSLSITPLATVAALGFTAPLFATLLAMLMLGEVVRLRRWTAILIGFAGTLIILRPG 130
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ + + V S+ +A + + + + A ++F ++
Sbjct: 131 VVEVGLGPLLVVASSVVWAFALMIIKVLTRTESSVTITAYASIFLSPICLAVAIPYWTWP 190
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+ +L G++ + + K A S V +++T + + + D
Sbjct: 191 GLEQLAWLAAIGVVGTIAQTAMNQSFKLADASAVLPVDFTKLIWASAIGFALFGETPDIW 250
Query: 286 RTIVFGIVVIAMVVYLLPTVINSGKNK 312
G++ + + + K
Sbjct: 251 TWAGGGLIFASATYIGIRESRLRKQGK 277
>gi|149203502|ref|ZP_01880472.1| hypothetical protein RTM1035_02755 [Roseovarius sp. TM1035]
gi|149143335|gb|EDM31374.1| hypothetical protein RTM1035_02755 [Roseovarius sp. TM1035]
Length = 306
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 86/297 (28%), Gaps = 7/297 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L + + + + + L V + +V+ R L + V
Sbjct: 2 PRSDNLTGALLMMGSMAAFTLNDAMIKALAGQVPLFQVMFLRGLVTTILVALIAWKMGAL 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L P M+ + + AL S P+ ++
Sbjct: 62 KRHLPREDWGPVFWRMVGEIGSAYFF-----VTALYHMPLANISAIMQALPLTLTLAAAL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F +E + ++ A + + ++++ ++ + + +
Sbjct: 117 FFREPVGWRRMAAIMAGFIGVMLIVRPGTEGFNIYSVYGLAAVAFVTLRDLATRRLSRDV 176
Query: 198 IEMC-VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
M L + S + + L + G ++ + ++ ++
Sbjct: 177 PSMLVTLFNSFFIMAFFGLGSLTGEWVALDGRAALLICGAAVMIIGGYLFSIMVMRVGEI 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S V YT+ + ++ T+ + GIVV + + L S + K
Sbjct: 237 SFVAPFRYTSLIWALILGWLAFGDWPQTLTLVGAGIVVASGLFTLYREAQISRRAKA 293
>gi|260427926|ref|ZP_05781905.1| possible transporter, RhaT family, DMT superfamily [Citreicella sp.
SE45]
gi|260422418|gb|EEX15669.1| possible transporter, RhaT family, DMT superfamily [Citreicella sp.
SE45]
Length = 294
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 85/294 (28%), Gaps = 9/294 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ L + + L + + + Q V +V+ + + L+
Sbjct: 1 MDTLRAILLMVLSMALLAASDAFLKLASQNAPVGQVMLMLSIGATLLFVALARLRRVSLN 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + I L L + P++ ++FL
Sbjct: 61 VADAFHRKVMLRNICEMAGA------LGMIVGLSKIPLSLMAAIMQTAPLVVTLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A + ++ +L++ G I A + +
Sbjct: 115 GEPVGWRRWLAIAVGLVGMLMVIRPGGSGFTGWEIFPVAGVTGLAARDLVTRVVPQRIPS 174
Query: 200 MCVLAIPALFYVVWNG--FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + A + P L + G ++ + + + ++ A +S
Sbjct: 175 IAISAYGFAAVFPVGLAVLLASGTPLVAEPPVFLHMAGAVVVTAAGYLAVTMAMRMAPVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V YT + + + + D +++ A + L + +
Sbjct: 235 VVAPFRYTRLVFTAGLGMAVFGERPDGWTWAGAALILGAGLYSFLRERRLARQQ 288
>gi|225028512|ref|ZP_03717704.1| hypothetical protein EUBHAL_02791 [Eubacterium hallii DSM 3353]
gi|224954155|gb|EEG35364.1| hypothetical protein EUBHAL_02791 [Eubacterium hallii DSM 3353]
Length = 286
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 75/290 (25%), Gaps = 8/290 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + + + + + + + +E R ++ A+
Sbjct: 2 SQKNKGIILIIMSAFFFALMNMMVRLAGDLPSIEKSFFRNFVAVFFALIAL------KRS 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ + + YA+ S ++P ++ + LK
Sbjct: 56 NTPVHVPKGQLKNLLMRSVCGTLGILCNYYAIDHLMLADASILNKLSPFFAILFSFILLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ + + L + + +L V A G
Sbjct: 116 EKIHPFAAGCVFIAFVGSLFIIKPGFASVTALPAFVGLLGGMGAGIAYTYVRKLGTNGVK 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKRAKLST 258
+ F + GL S + A
Sbjct: 176 GPFIVLFFSAFSCIVTLPYLIFDFHPMTLAQLGCLLLAGLFASGGQFTITAAYTCAPAGE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I +Y+ + V L+Q D + +GI++ A V L
Sbjct: 236 ISIYDYSQIIFSTVLGFLFLRQIPDMWSFVGYGIIIAASVAMFLFNNRKR 285
>gi|194016125|ref|ZP_03054740.1| YdzE [Bacillus pumilus ATCC 7061]
gi|194012480|gb|EDW22047.1| YdzE [Bacillus pumilus ATCC 7061]
Length = 292
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 83/290 (28%), Gaps = 15/290 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L++ A +WG + + V LE++ R + + I
Sbjct: 1 MMNEKYIGALYLAIAASIWGGMYVVVKVTVAVVPPLELVWMRYAVAGVVLVITIWRLGYS 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K M++ + + + + TP V
Sbjct: 61 FRLDK-----KDIPLMVLIGLIGNFLSIVTQEIGTMYTSAQMGAVITSATPAFMVLFAFF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTI 188
LKE + + + LL + +M G+ L+ A+ + R
Sbjct: 116 LLKEAMTVRKCASILLATAGVWLMIGPVAVQTDEFVGGLSLVFAALTWALMSVLLKRVPG 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I V++ L + + F +++
Sbjct: 176 KYPQVVTTTYAIIIAFIVLTPPVLFRLPHLDVEQMARPEIWGGILYLGIISTALAFFLWN 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G++ S+ G+ + P++ V +L + + I + +
Sbjct: 236 RGLQLMDASSGGLFFFFQPIVGAVLGWLLLGEEMGLRSFIGILCIFAGVY 285
>gi|15643775|ref|NP_228823.1| hypothetical protein TM1017 [Thermotoga maritima MSB8]
gi|4981557|gb|AAD36094.1|AE001763_6 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 293
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 97/294 (32%), Gaps = 13/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++G++ L+T+ L+ V+ L +S R + + ++ + L
Sbjct: 6 LLSGLAYSTIFGLSFLFTKNALDYVTPLTFLSFRFIVAFLSYLLLLITGAVKLG------ 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ F Y L + P++ L LKE+ +
Sbjct: 60 -KKPYWKLWKLVLFQPVLYFLFETYGLQRVNSSEAGMIIALIPIVVNLLAPFILKEKGDL 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + + L + ++ + P + +AV A I
Sbjct: 119 LHYLLVGMGFLGVSLIVGFNITPGNIVGKVFMLLAVLSGAMYSVFSRKFSKEFTPTEITF 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A+F+ + + +G L L ++ F + +Y I++
Sbjct: 179 FMMMTGAVFFTLLSLSTGDFRPVFNVDVVIGALYLGVLSSTVAFFLLNYAIRKLSPIFTT 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ +++ V + + + G+++ ++++ L K
Sbjct: 239 LFSNFTTVVSVIAGVVFRNETVGIQQIAGMGLIISSLIIMSLRRSYKRLSRAQK 292
>gi|329770470|ref|ZP_08261849.1| hypothetical protein HMPREF0433_01613 [Gemella sanguinis M325]
gi|328836325|gb|EGF85991.1| hypothetical protein HMPREF0433_01613 [Gemella sanguinis M325]
Length = 286
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 95/287 (33%), Gaps = 6/287 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + A + + L+ + + ++ R + ++ ++ +
Sbjct: 3 NNNILKGIFCIIIAGFGFALMSLFVKLSGDLPSMQKGFFRNIIAVFISSIPLIKHWKVIR 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K+ + V +F L ++ YA+ +S ++P I + L +F
Sbjct: 63 IPKNKIGWLVLVSRSIFGTIGLVLN----FYAISHISLADSSIIQKLSPFIILILSYIFF 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE + Q+ A ++ + ++ + SG ++S+ + G
Sbjct: 119 KEEMTRFQVFAIVIAFIGIIFIIKPSGNDIISMGALAALLGALCSGIAYTCVRYLGTHNI 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKRAKLS 257
I + F ++ + G+ + ++ K A
Sbjct: 179 SGEFIIFFFSSLSSLMLLPYLIFDYRSMTLYQLSMLLLAGISATIGQYGVTFAYKFAAAK 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + +Y+ L + + D I + IV+ +V +L +
Sbjct: 239 NISVFDYSQVLFSGIFGYMFFGEFPDFQSLIGYIIVISVGIVLVLRS 285
>gi|306829251|ref|ZP_07462441.1| membrane protein [Streptococcus mitis ATCC 6249]
gi|304428337|gb|EFM31427.1| membrane protein [Streptococcus mitis ATCC 6249]
Length = 301
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 102/301 (33%), Gaps = 10/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GTLF A I WG++ Q+L +S L + + R++ + + F +
Sbjct: 2 SKTVKGTLFTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLIIAGLALVFLTYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 LLAFLKDR-KSLFSLLLFALFGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K +II+ L I ++ H L + + + I +
Sbjct: 121 DKVAPTLAEIISICLAIGGTFLIATHGELDQLSVTPAGLFWGLFSALTYALYIILPIGLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + + + F + F + F G
Sbjct: 181 KKWGSMLVIGVGMVISGVGAIPFTGVLQASIPTSLDFLFAFAGIIIIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+K+ + + ++++A+ + L ++ K+
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMKEQFYAIDFVGMAMILLAVTIISLKDLLLESKH 300
Query: 312 K 312
K
Sbjct: 301 K 301
>gi|297162165|gb|ADI11877.1| hypothetical protein SBI_08759 [Streptomyces bingchenggensis BCW-1]
Length = 329
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 77/283 (27%), Gaps = 6/283 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + ++ + E + L V R+L+ + +V L +
Sbjct: 46 ALIWGFSFVFIKVGTEAFAPLYVTLGRMLFGTAVLVAVLVAKRERLPRGARAWGHLAVAA 105
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + + + + + + I
Sbjct: 106 FFLNALPFSLFAYAELTIPSTLAGICNATSPLWGMVLAVAAASDDRPTRQRVAGLGIGFA 165
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
+++ L + SG A+A+ S + G + L +
Sbjct: 166 GVLVVLGVWQGFSGQDPAGTAMALAASLSYAVGWQYVRRTLSGSGHSHLAMSGAQLLMGT 225
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
V +P + L F F + ++ +T ++ Y P
Sbjct: 226 AQLAVVAPLFAPAPGSFPVLPLLSVVALGALGTGFAFLVQYGLVEEVGPTTAMMVTYFVP 285
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ + V IL + + + IV+ + + +
Sbjct: 286 VIATAAGVAILGEHLTWNTPVGALIVLAGAALTQTRPRARAPR 328
>gi|259156127|gb|ACV96075.1| protein of unknown function DUF6, transmembrane [Providencia
alcalifaciens Ban1]
Length = 331
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 93/295 (31%), Gaps = 18/295 (6%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF +LW + + + +S + R L +L + + L+
Sbjct: 39 LFFITPPLLWSCNFIVGRAIRNDLSPFMITFSRWLIAL--MVILPFAYKYLKRDFHQYLQ 96
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P V + + + L PV + +V K+ L+
Sbjct: 97 YPIRVIATAVTG--VLSFSLLVYFGLHHTSSTNALLLNSCVPVFILLFSAVVYKQPLSGR 154
Query: 147 QIIAALLIILSLLIMTL-------------HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
QI+ L +L + + LL I+ + + V
Sbjct: 155 QILGLCLSFTGVLSIIFKGDLKGLLSLQLSQGDLLLLMAMISFAFYTLWLKKIPYSVNRL 214
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I++ + + L +++W G+S G GN L + + +FS ++
Sbjct: 215 GLLSIQIVITLLATLPFILWEGYSDGSQQHWGNDIYLAVLFLGICPSFISYLLFSRCVEA 274
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G + P+ ++ S+ L + I + ++ + + + + N+
Sbjct: 275 IGAERAGFSIHLIPIFGVILSLLFLGESIHWFHVVGSATILFGVGLSSMQSKRNA 329
>gi|163749337|ref|ZP_02156586.1| membrane protein [Shewanella benthica KT99]
gi|161331056|gb|EDQ01982.1| membrane protein [Shewanella benthica KT99]
Length = 291
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 117/298 (39%), Gaps = 11/298 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ +S + G L + A +L+G T L+++ + +S L + R + + + + +
Sbjct: 1 MNQTASSKQS--GLLELHLAVLLFGGTALFSKII-PLSALNITLLRCIVAALVLACIVKF 57
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
LSL + + + + I+++HW + ++ + ++F PV++V
Sbjct: 58 SKKNLSL-----NSTRDYFIALGLGIIVSLHWVTYFASMQLSSVAIGMIAFFTYPVMTVL 112
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPV 190
+ +F R+ +++ L ++L ++++ + +A+ + +A+ AR +
Sbjct: 113 IEPIFTGNRIQRSDLVSGLAVLLGVILLIPEANLGNDVTMGIALGILSAAFFTARNLLHK 172
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + E + L L+ + + +F+
Sbjct: 173 RYFSAYSGPHAMFYQTGVAVFFLAPWHTIEFSQIEQDTWWLILLLGVMFTAAPHALFTTA 232
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ TV ++ P V ++ L + +D TI +VV + S
Sbjct: 233 LRHLSAKTVSLVSCLQPFYGAVLALLFLGEQLDIKTTIGGLLVVATAIFETQRHRKTS 290
>gi|329668069|gb|AEB94017.1| putative permease [Lactobacillus johnsonii DPC 6026]
Length = 300
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 89/301 (29%), Gaps = 12/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T A + WGI+ L+ + L ++ + + R++ S +
Sbjct: 2 TKKRLWTCLAALACVFWGISGLFAKGLFNISSSITPIWISQVRMVVSGVLLLIFAQITGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LK A+ ++ + L + + + + F+ P +F
Sbjct: 62 --RPLKTMTDKKDAITVIAYGLLGLLPVQYCYFIVVQQANASIATVLQFIGPFFVLFYMV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPV 190
VF + L + +IAA++ + + + H P + ++
Sbjct: 120 VFEHQVLRAVDVIAAIVAFIGVFFLATHGHFNQLSLTPSVLFWGLISAVGVATNTLIPRR 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + L + F
Sbjct: 180 LLDHTSSLVVTGWGLLFSGIALVIVHPVWPKIPNNINVFWLMAGVIVIGTLIPFQWMMGS 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ K ST +++ P+ + SV I + + I +++ A++ + K
Sbjct: 240 LRYIKPSTASLLDAFEPVSATIGSVIIFGLVMAPIDWIGSIMIICAVLALNWEPKSRNKK 299
Query: 311 N 311
Sbjct: 300 E 300
>gi|229083812|ref|ZP_04216123.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-44]
gi|228699469|gb|EEL52143.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-44]
Length = 310
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 108/298 (36%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L Q VS ++ + R+L + + ++
Sbjct: 3 MNNNRRLGLIMIITGATLWGLSGPMIQWLFQHTKVSSIDFLVIRLLLAGVFILCFLLVKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + +++FS + FI + + F+ PV+
Sbjct: 63 QN--IFRIWQQPRHLLQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITVYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
++ K+ + +Q++A + + + + + L L A+ ++ Y
Sbjct: 121 AIQYKKLPSTMQVLAIVAALTGTYFIITNGSVQNIVLSKEAILFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L ++ F IP LI + + F +
Sbjct: 181 SLIKQWGTTLIIGWGMLIGGIALFIYNRSFEWKHLSQTFTIPTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ V S+ LK+ + + +VIA++ +P
Sbjct: 241 YIGSLKYLSATETSILSSIEPLVAAVVSIAWLKESFGAYQLLGGVCIVIAVIFLTMPE 298
>gi|227529607|ref|ZP_03959656.1| DMT superfamily drug/metabolite transporter [Lactobacillus
vaginalis ATCC 49540]
gi|227350397|gb|EEJ40688.1| DMT superfamily drug/metabolite transporter [Lactobacillus
vaginalis ATCC 49540]
Length = 317
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 92/301 (30%), Gaps = 14/301 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSV----LEVISHRVLWSLPGVFFAIVYFS 75
S +G V A WGI+ L+ + L +S L + R+++ +
Sbjct: 16 SNKKALGLAMVITATTFWGISGLFAKALFNISPSITSLWLTQWRLIFGGVIMIVISKLMG 75
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + L + A+ + + FV P +
Sbjct: 76 NHP--FAIFHNLHDTWVIFAYGVIGLVPVQFAYFMAVQEGNASIATILQFVGPFFIIAYL 133
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKT 187
+VF E ++II A++ L + I+ H L++ AV + A
Sbjct: 134 AVFRHEPPRRIEIICAIIAFLGVFIIATHGRFNHLAVTPAVLFWGFISAVGVATNTLIPQ 193
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + +++ + V+ + F +
Sbjct: 194 KMLQTGRVPSLDVTAWGLLFAGIVLLAIHPQQPAIPNVPSVWIDCASILIIGTIIPFYLA 253
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ +T +M+ PL + SV I + + +V++A+ +
Sbjct: 254 NTSLRYIDATTFSLMDAFEPLSATIGSVLIFHLYLTGADILGSILVIVAVCAINIRPHRK 313
Query: 308 S 308
+
Sbjct: 314 N 314
>gi|198286389|gb|ACH85848.1| PecM like protein [Salmonella enterica subsp. enterica serovar
Kentucky]
Length = 294
Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 97/296 (32%), Gaps = 16/296 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +WG T + T Q+L S + V R L + + + +
Sbjct: 8 LLFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALPAGLLLVMIV----------RQIP 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + A +++ W ++ G + + V P++ VF+ + L +
Sbjct: 58 TGIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLMVVFISAALLGSPIRL 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-----SAYCFARKTIPVGSSEGFFIEM 200
+ ++ A+ + ++ L L + +A A+ +
Sbjct: 118 MAVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGTVLTRKWQPPVPLLTLTA 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LA L V + + ++ GI R + + V
Sbjct: 178 RQLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAGLTYFLWFRGISRLEPTVVS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++ + +P ++ L Q + ++ I +V+ ++ + + +KS
Sbjct: 238 LLGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWLGQRSNRTPRARIACRKS 293
>gi|91785513|ref|YP_560719.1| hypothetical protein Bxe_A0266 [Burkholderia xenovorans LB400]
gi|91689467|gb|ABE32667.1| Membrane protein [Burkholderia xenovorans LB400]
Length = 310
Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/309 (11%), Positives = 84/309 (27%), Gaps = 9/309 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + + + A ++WG + + L+ + R L V IV
Sbjct: 1 MKAETRQHLRANVLMLIAAMIWGSAFVAQRLSLDAIGPFLFTGLRFLLGALVVLTLIVCV 60
Query: 75 SGGLSL---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+++ + +G V +LA L + F + VI
Sbjct: 61 RRSAPAELSKRESGGARELLGAGVLLGVVLAASISLQQIGLQYTKVANAGFISSLYVVIV 120
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKT 187
LG +F + A L + + ++ +
Sbjct: 121 PLLGVLFRHRT-GIGTWLGAALAAVGMYFLSVNEQFSMLYGDWYQLAGALVISIQMMLVG 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + L +V + + G L + I
Sbjct: 180 RFALRHDTLMLALVQFVTCGLACLVVGLAIEPFSLAVIARAAPTIVYGGALSVGVAYTIQ 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
K A S ++ + +++ +L + + +++ +VV +
Sbjct: 240 VVAQKHAAPSHAAVIFSMEGVFAALAAWLVLGETMSARALSGCALMLAGLVVCQVMPAWR 299
Query: 308 SGKNKTKKS 316
G + ++
Sbjct: 300 RGNERLPRA 308
>gi|62317485|ref|YP_223338.1| hypothetical protein BruAb2_0560 [Brucella abortus bv. 1 str.
9-941]
gi|83269468|ref|YP_418759.1| hypothetical protein BAB2_0573 [Brucella melitensis biovar Abortus
2308]
gi|189022739|ref|YP_001932480.1| Protein of unknown function DUF6 [Brucella abortus S19]
gi|237817036|ref|ZP_04596028.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254690980|ref|ZP_05154234.1| hypothetical protein Babob68_12690 [Brucella abortus bv. 6 str.
870]
gi|254698765|ref|ZP_05160593.1| hypothetical protein Babob28_14001 [Brucella abortus bv. 2 str.
86/8/59]
gi|254732209|ref|ZP_05190787.1| hypothetical protein Babob42_13786 [Brucella abortus bv. 4 str.
292]
gi|256256166|ref|ZP_05461702.1| hypothetical protein Babob9C_02135 [Brucella abortus bv. 9 str.
C68]
gi|260544721|ref|ZP_05820542.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260756574|ref|ZP_05868922.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260760005|ref|ZP_05872353.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260763245|ref|ZP_05875577.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882393|ref|ZP_05894007.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|297249525|ref|ZP_06933226.1| hypothetical protein BAYG_02280 [Brucella abortus bv. 5 str. B3196]
gi|62197678|gb|AAX75977.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
gi|82939742|emb|CAJ12739.1| Protein of unknown function DUF6 [Brucella melitensis biovar
Abortus 2308]
gi|189021313|gb|ACD74034.1| Protein of unknown function DUF6 [Brucella abortus S19]
gi|237787849|gb|EEP62065.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260097992|gb|EEW81866.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260670323|gb|EEX57263.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673666|gb|EEX60487.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676682|gb|EEX63503.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260871921|gb|EEX78990.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|297173394|gb|EFH32758.1| hypothetical protein BAYG_02280 [Brucella abortus bv. 5 str. B3196]
Length = 305
Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 90/285 (31%), Gaps = 6/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L F +Y + ++ +FL+ +S E+ + + + F+
Sbjct: 2 LYGILLAFASYAAFAVSDACVKFLDGTLSPYEIAFY-----GAVLGLLAIPFTQKADDAW 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + M + A+ + A F+ P L +FLKE+
Sbjct: 57 LDMFRTGNIKMWLLRTVTAAMGVIGSVAAFTYLSMAEAFALIFLLPAYVTILSVIFLKEQ 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L+ L + + A I + +
Sbjct: 117 VGWRRWSAVAIGFAGVLVALRPGFRELSIGHLGALAAGMGGATSIIIFRVMGKNEKRISL 176
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ G + ++L GYGLL + + +R S +
Sbjct: 177 YTSGLVGPILICGALMAPSYQAPGTMQWVYLAGYGLLAALANIMLMLAAQRPPASAIASP 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y+ + I+ F+ ID I ++ I+ + +
Sbjct: 237 QYSQMIWAILFGYFVFHDHIDMPMLIGIVLITISGLFTFIRERQR 281
>gi|42527705|ref|NP_972803.1| membrane protein [Treponema denticola ATCC 35405]
gi|41818533|gb|AAS12722.1| membrane protein [Treponema denticola ATCC 35405]
Length = 296
Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 105/300 (35%), Gaps = 13/300 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L A + +G + +++F L + R + + G +
Sbjct: 2 SNKIKSYLSAITAIVFFGSSFPFSRFALTHFGPEALGFLRCFLASLVLLIM-----GRFN 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ K + A A++ FF + T +S TP+++ SV
Sbjct: 57 KIRAPFKLKHIGLFFLSGALGFALYLIFFNMGIRTITAATSSIIIATTPIMTAAAASVIY 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVGSS 193
E++++ + L +L++ L GI L +++ A+++ Y + +
Sbjct: 117 SEKISNAGWFSILTAFCGVLVIILWKGILSVNIGILWTMSAAISFCGYNILSRKLAKMGY 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I + A + E G L ++ + F+ GI+
Sbjct: 177 TSIEIVTYSMICAAAILSPFCIDGYKELSSAGFKYIGSLLYLGIFTSALGYFFFNKGIEI 236
Query: 254 AK-LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A+ S + + PL+ + S L + +T I I++ +++V+ L +K
Sbjct: 237 AEKTSDITNFLFFNPLIASILSYLALGETFNTGTAIGGTIIIASIIVFALKGEQKKAADK 296
>gi|56419857|ref|YP_147175.1| hypothetical protein GK1322 [Geobacillus kaustophilus HTA426]
gi|56379699|dbj|BAD75607.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 292
Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 81/293 (27%), Gaps = 14/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++ A +WG + +++ L+ + ++ R +L + V
Sbjct: 2 KQAFLASFYLSLAAGIWGGMYVVSKYVLDYIPPFTLVWLRYAVALIVLGAVAVAKRE--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ V S TP V +
Sbjct: 59 --RPPKNGRDWGMIITVGIIGYVVSISLQFVGTKWSNAHTASLITASTPAFVVLFARWLI 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIPVG 191
E L ++ A LL ++++ G L A +
Sbjct: 117 GEALTWRKLGALLLATFGVIVIVGLGGGEESTFLGNVCLVGAAVTWALLSVLVKIASARL 176
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S +A+ + ++ G L + + F +++ G+
Sbjct: 177 SVFSITTYAIFVALIGMTPMMLAEGPGLAASHWSVPVALGVLYLGVVSTAGAFFLWNKGM 236
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + PL+ + L++ +D + ++ + V +
Sbjct: 237 EMIDAGVGSLFFFFQPLVGSLFGRLFLQEQLDVSFWLGGALIAAGVAVAVRSE 289
>gi|167629516|ref|YP_001680015.1| dmt superfamily protein, putative [Heliobacterium modesticaldum
Ice1]
gi|167592256|gb|ABZ84004.1| dmt superfamily protein, putative [Heliobacterium modesticaldum
Ice1]
Length = 318
Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 78/286 (27%), Gaps = 3/286 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + + + L + +WG T + + + + ++ R + G+F A +
Sbjct: 9 QQRTSRVSPLTADLILLSVAAVWGGTFVAVKEAIAFMPPYTFLAIRFFIA--GLFLAAIA 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L +++ +G +F L + + S V
Sbjct: 67 GRRWQRLTGAAVRHSFMLGACLFGGYALQTIGLQYTTSSHAGFITGMSVVLVPLVGWLVH 126
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + L ++ +T++ G L+ +
Sbjct: 127 KQAPRSGVLAGVAMAVTGLGLLTLTDDLTVNPGDLLVLGCAFCFGLHIFLVGQVTHRHDP 186
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I + A + + T + S F Y K
Sbjct: 187 MLLSIMQIIAVGIACTAFSCFFDPPLAYDQFRSEVWTALALTAIPATSLAFLAQMYFQKF 246
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ T P+ ++ + + + + +V+ +VV
Sbjct: 247 TTATRTALIFATEPVFALLFGIALAGETLTLRGAFGGILVMAGIVV 292
>gi|320159196|ref|YP_004191574.1| permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus MO6-24/O]
gi|319934508|gb|ADV89371.1| permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus MO6-24/O]
Length = 298
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 88/284 (30%), Gaps = 2/284 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RVL++ + +Y + L K+ +G
Sbjct: 13 AAIWGSSFLFMRIAAHSFGPAYLIELRVLFAAISLLLVSLYLRKHIRALLSHPKHFFIIG 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + L + T ++ + + T + + + + + L +
Sbjct: 73 LFNTALPFLCFAYAAQTLNASTLAVLNSTAAIWGTVIGFFWHKTPISTKGVIGLMLGVTG 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+++L L + V + G+ + ++ A +V
Sbjct: 133 VVVLVGWDAINLGQQAALPITAGVMAACCYGIATNYTKGAPQVPAFANAHGSMWAAVLIV 192
Query: 213 WNGFSG-GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ +I L + ++ I ++ + + P+ I
Sbjct: 193 LPLLPFVPMNAMPTSIEWLSVFALGILCTGIAYLMYFRLISEIGPASALSVTFLIPVFGI 252
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ IL +PI +V+ ++ ++ ++ + K
Sbjct: 253 LWGYLILNEPIGINTLAGTVLVLSGTMMVTGFSLRSALSSPQAK 296
>gi|153933140|ref|YP_001383689.1| putative transporter [Clostridium botulinum A str. ATCC 19397]
gi|153936197|ref|YP_001387237.1| putative transporter [Clostridium botulinum A str. Hall]
gi|152929184|gb|ABS34684.1| putative transporter [Clostridium botulinum A str. ATCC 19397]
gi|152932111|gb|ABS37610.1| putative transporter [Clostridium botulinum A str. Hall]
Length = 326
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/306 (11%), Positives = 90/306 (29%), Gaps = 13/306 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + V A + WG + T+ L + S+P +F+ I F SL
Sbjct: 6 NDKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFRRDPSL 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K K + LL L + + + + V + K
Sbjct: 66 FKVDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALALATMFLYTSQIWVVTISYFMFK 125
Query: 141 ERLNHLQIIAALLIILSLLIM-------TLHSGIPLLSLAIAVTWSAYCFAR------KT 187
E+ + I+ LLI++ +M + + + + ++ +
Sbjct: 126 EKFTTQKAISMLLILIGCFMMCEMHKLGSFNLSTKGIFWGLISGFTFALQILLAKVSNEK 185
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ AI ++ + + +
Sbjct: 186 YHYNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFKNSNNLFFLFKNIFWSVVGTLIANTAY 245
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + S ++ ++ V + Q ++ V+ + ++++++++ + +
Sbjct: 246 VKSVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKKSVF 305
Query: 308 SGKNKT 313
K
Sbjct: 306 LKLFKK 311
>gi|83594109|ref|YP_427861.1| hypothetical protein Rru_A2777 [Rhodospirillum rubrum ATCC 11170]
gi|83577023|gb|ABC23574.1| Protein of unknown function DUF6, transmembrane [Rhodospirillum
rubrum ATCC 11170]
Length = 320
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 81/283 (28%), Gaps = 3/283 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + A +++ T++L + I W+ A+V G
Sbjct: 36 RLGVACLVGATVIFAFQDGITKYLASHYPIPFIVMVRYWAFALFAIALVARKPGGVRAAT 95
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K P + + V P++ + + V L ER+
Sbjct: 96 RSKRPILQSLRALLLVSEIGLVALAF---RHMGLAEVQSIFAVYPLLVMAMAIVLLGERV 152
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +A + + LLI+ A+ SA +A T+
Sbjct: 153 GWRRWVATGVGFIGLLIIVRPGVGTFEPAALYSLASATMYALYTVLTRMVSADDSAGTTF 212
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + GG H+ + D ++ L + ++ A S +
Sbjct: 213 LYTGVVGAILVTLFGGAHWTAMSGIDWGWMALLALFGMSSHFLLIKALEYAPASVLQPYN 272
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y + + + + D I ++V + + L
Sbjct: 273 YLSLVWSGIVGYLVFNNIPDLATFIGGAVIVASGLYVLYRDRK 315
>gi|291619650|ref|YP_003522392.1| YwfM [Pantoea ananatis LMG 20103]
gi|291154680|gb|ADD79264.1| YwfM [Pantoea ananatis LMG 20103]
Length = 310
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 73/298 (24%), Gaps = 7/298 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G V A +LWG T F +S L V S + L
Sbjct: 10 GATAVIIAAVLWGTTGTAATFAPALSPLAVGSVAMGIGGLFQGLIAATPLIRQRRLIFRH 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT-------SFSYFVTPVISVFLGSVF 138
G L + LA + + + + + +
Sbjct: 70 WPFLLTGALAVAVYPLAFYASMRYAGVTVGTVISIGSAPLLSALIEYRLEGVRLTKQWAG 129
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
I+ L + + +A A +
Sbjct: 130 GAATGLAGMILLCLAESGGHSTGQGSAMTGITLGLLAGFTYALYSWSARRLMQGGIAPRA 189
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
M +V G + + + + + YG+ R S
Sbjct: 190 AMGATFGAGGILLVPVLLMTGAPLLETWNNAAVGIYMALVPMFLGYLCYGYGLARIPASM 249
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ P++ + ++ ++ + + G+++ + V P + + +++
Sbjct: 250 ATTITLLEPVVAALLAILLVGERLPLSGWAGVGLIIACLGVITFPAGKRASPSAQRRA 307
>gi|251780647|ref|ZP_04823567.1| putative integral membrane protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084962|gb|EES50852.1| putative integral membrane protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 290
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 103/292 (35%), Gaps = 13/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ T G + + + +G+ P++ + VI R L S +F ++Y +
Sbjct: 1 MNTYKGISYAILSSVAFGLMPIFASIAYENGSNPTTVIIFRFLLSSISLFIYLLYKKIKI 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +L + + L + +F+ P I +G VF
Sbjct: 61 KIKRKPML-----ILLGIGIIAYTITTQTLFMSYNYLGAGLATTLHFIYPAIVCIIGFVF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
LKE+++ ++I+ LL + + + L ++ I V ++ + S
Sbjct: 116 LKEKISKRKLISLLLSGIGVYSLVAFESKSLSTIGIFLALFSGVAYAINLIILGLDCIKS 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + L + + F+ T ++ + + I+
Sbjct: 176 IDNKISTLYMCVGATLGMITYGLFTNSIVLTFNTKMVTSYIGISLISTIVSIILLLKAIE 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S+ I+ P++ I+ V IL + + I +++ A +V T
Sbjct: 236 LIGTSSTSILGTFEPIVSIIFGVLILGENLSFELVIGAALILTATIVLAKDT 287
>gi|189912945|ref|YP_001964834.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|189913271|ref|YP_001964500.1| Hypothetical protein; putative membrane protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167777621|gb|ABZ95921.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167781339|gb|ABZ99636.1| Hypothetical protein; putative membrane protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 313
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 97/297 (32%), Gaps = 10/297 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ +S + L + ++ G L+ + L + +IS R L+S+ +
Sbjct: 8 KTSSPTLLRSVLELNLTVLIMGNVTLFAKLL-PFPAVTIISGRALFSVLILGLFFALRRK 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+S K+ K G + + A+HW + +++ + S F PV S L
Sbjct: 67 SIS-----YKSFKDFGFVFGIGILFALHWVTYFHSIQVSTVAVGMLSLFTYPVFSAILEP 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----AIAVTWSAYCFARKTIPVGS 192
+F ++ + A + L ++ V+ Y
Sbjct: 122 LFGGKKPEPFALFLASFSLFGLFLIVPDLSWDNQMFQGVVWGVVSAVLYAIRNLLTKEMH 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + A V+ G +I G+ S I+ +
Sbjct: 182 VHYPSSQILFTQLFATSLVLLPFADGLSQMLAEPKYLLFQIILAGIFTSLAHTIWIRSLS 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++T G + +P+ +++ + L + + G+++ V+ + +
Sbjct: 242 NLSVTTAGTLSTLSPIYGSLAAWYFLGEVPPERLWLGGGVILFCAVMEVFRKQKENR 298
>gi|39937360|ref|NP_949636.1| DMT family permease [Rhodopseudomonas palustris CGA009]
gi|39651218|emb|CAE29741.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Rhodopseudomonas palustris CGA009]
Length = 343
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 79/286 (27%), Gaps = 18/286 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV-YFSGGLSLLKDT 84
L + + W + + + V + + R + ++ + + L+
Sbjct: 59 YLLLSLTSLFWAGNIVLGRAVAGHVPPVTLSCARWVGAMLLLLPFAWPHLRHDWRKLRAQ 118
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K M+V SAT A++ + L Q P+ + RL
Sbjct: 119 WK-----LMIVLSATGFAINNALSYWGLQYTQALNALLMQSSGPLFVALWSLLLFGVRLT 173
Query: 145 HLQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSS 193
+Q L +L +L + L L+ + Y P
Sbjct: 174 WMQATGIALSLLGVLTIILRGDFAALAGIELNRGDLMVAGALCAFGLYSALMPKRPATHP 233
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L ++ G I + + F+ G+
Sbjct: 234 LSLIVVTTGCGALLLLPFSAWEYASGVRPSADWISVATLAYVVIFPSMLAYLCFNRGVAL 293
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ V ++ +L + + + +VV + +
Sbjct: 294 IGPNRSAPFLHLMPVFGSVMAIVLLGEKPELFHLAGYAMVVAGVFI 339
Score = 40.7 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 49/155 (31%)
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
A LI S + P L L++ + A G + L
Sbjct: 40 ALDLIAWSRSAFGWLAHQPYLLLSLTSLFWAGNIVLGRAVAGHVPPVTLSCARWVGAMLL 99
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + L ++ + + +G++ + +M+ + PL
Sbjct: 100 LLPFAWPHLRHDWRKLRAQWKLMIVLSATGFAINNALSYWGLQYTQALNALLMQSSGPLF 159
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + S+ + + ++ + ++ ++ +L
Sbjct: 160 VALWSLLLFGVRLTWMQATGIALSLLGVLTIILRG 194
>gi|75762544|ref|ZP_00742400.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228901866|ref|ZP_04066036.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis IBL
4222]
gi|228966268|ref|ZP_04127328.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74489962|gb|EAO53322.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228793452|gb|EEM40995.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228857807|gb|EEN02297.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis IBL
4222]
Length = 294
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 99/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G +++ +WG + +++ L+ + L ++ R + + ++F +
Sbjct: 2 KQTILGAIYLSLTASIWGGMYVVSKYILDFIPPLTLVWLRFIIAFVVLYFILKIA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKATIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQAASIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELLDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|119716091|ref|YP_923056.1| hypothetical protein Noca_1858 [Nocardioides sp. JS614]
gi|119536752|gb|ABL81369.1| protein of unknown function DUF6, transmembrane [Nocardioides sp.
JS614]
Length = 304
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 87/289 (30%), Gaps = 7/289 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + +WG L+ ++ E++S ++ RV + L V +
Sbjct: 2 SKRTSRWALAAFAVVGFIWGSNFLFMKWAAEEISPRQIALLRVAFGLLPVLALGLARREF 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +G+L S + G + F V +V L +
Sbjct: 62 RRWHLRHTVHFAVMGVLATSLYYVLYAAGTERLPSGLAGALSGAIPLFAFMVGAVALPTE 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ R + +++ +H + + + + VT SA A G
Sbjct: 122 PMTPRRVLGAFLGLAGVVMMARPWNVHGSVDPVGVLLMVTGSACVGASFVYTRRFITGLD 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNI------PDTLFLIGYGLLNSFVFCIFSYGI 251
I L + + + +G I L L + + IF Y I
Sbjct: 182 IPPTALTTYQMALGLVALLPLTDLHGIGAIRGDHRALVGLVLGLGLVGTGLSYVIFYYLI 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+T Y P++ + L +P+ ++++ + +
Sbjct: 242 AELGAATASAASYLPPVVALAIGWIGLGEPLRHADLAAVALILLGVAII 290
>gi|229095229|ref|ZP_04226221.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-29]
gi|228688088|gb|EEL41974.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-29]
Length = 310
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 102/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNKNRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGVFILSILLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFQKRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKSAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSITWLNESFGSYQLLGGVCIVLSVIFLTMPQ 298
>gi|206978480|ref|ZP_03239342.1| permease, drug/metabolite transporter [Bacillus cereus H3081.97]
gi|217957843|ref|YP_002336387.1| permease, drug/metabolite transporter [Bacillus cereus AH187]
gi|206743308|gb|EDZ54753.1| permease, drug/metabolite transporter [Bacillus cereus H3081.97]
gi|217063763|gb|ACJ78013.1| permease, drug/metabolite transporter [Bacillus cereus AH187]
Length = 306
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLL----FSFKQLKKSVVH 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 60 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEKIQL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L +L++T+ S +++ A ++ + +
Sbjct: 120 NYWIGIVLGAAGVLLITIPSSNGNQEVSLIGDTLILLSTFLFAFYTVLLKRPKQEQYLSN 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 180 KVFTTLTLIIGAVILLPFAMIETFYYGFPEIETWKTGFSVMYLVIGATILAYWFWNRALE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ I++S+ +L + + I +V+I +
Sbjct: 240 TVSASVSGLYLNALPLISILASIALLDESLTWKIVIGGSLVLIGV 284
Score = 40.7 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ + +P
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLLFSFKQLKKSVVHKQVP 63
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S LK+ I I
Sbjct: 64 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEKIQLNYWI 123
Query: 289 VFGIVVIAMVVYLLPT 304
+ +++ +P+
Sbjct: 124 GIVLGAAGVLLITIPS 139
>gi|149927903|ref|ZP_01916153.1| hypothetical protein LMED105_07463 [Limnobacter sp. MED105]
gi|149823342|gb|EDM82575.1| hypothetical protein LMED105_07463 [Limnobacter sp. MED105]
Length = 313
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 82/295 (27%), Gaps = 13/295 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
PT G I + + + + V +++ R+L SLP +F + F+
Sbjct: 10 RSPTAWGVGLALLGAIFFSGKAIVVKLAYAYPVDASTLLAMRMLLSLP-LFLGALIFTVL 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + V + F L L F P I + + +
Sbjct: 69 REKNAVKMTAKDYGLIAVAGLLGYYLASLFDFMGLQYITAGLERLILFTYPSIVLLIACI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKT 187
+ Q++ L + L ++ H G+ L+ ++ S +
Sbjct: 129 IKHQWPQPWQLMCMALSYVGLAVVYGHETVLVGDNTALGVVLVFVSAICYASYLIVGERL 188
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + +++ A+ + L+
Sbjct: 189 LKRLGTIRVTAMATLISAAAILIQINIQQPLSIIVEQPLPVWGWSLVNAVFCTFVPVFAV 248
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I V + P+ I +IL++P +V+ + + +
Sbjct: 249 MTAISLIGAPRVSQLGMIGPIATIALGTWILEEPFTVWHAAGTALVIAGVALLSM 303
>gi|83749072|ref|ZP_00946078.1| Transporter, drug/metabolite exporter family [Ralstonia
solanacearum UW551]
gi|207742532|ref|YP_002258924.1| hypothetical protein RSIPO_00720 [Ralstonia solanacearum IPO1609]
gi|83724262|gb|EAP71434.1| Transporter, drug/metabolite exporter family [Ralstonia
solanacearum UW551]
gi|206593924|emb|CAQ60851.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 310
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 84/278 (30%), Gaps = 4/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + LWG + L+ + + + +I+ RV + + + GGL L+
Sbjct: 6 VIELLTLAALWGGSFLFMRVAAPLFGPVALIALRVAIASAFLLPVL-AMRGGLGALRAQW 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ AVG+L + + + F V V+LG R+
Sbjct: 65 PHLLAVGILNSAIPFCLFAYAELTLTAGFTSVLNAAAPLFAAIVAFVWLGERMSSWRVLG 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--FIEMCVL 203
L I +I+L L +G L++A A+ + + G
Sbjct: 125 LAIGFVGVIVLVGGSSALDAGQGGLAVAAALGATVLYGLASSYTKRHLTGVPPLAVATGS 184
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A + + + +F + + +
Sbjct: 185 QVAAAIVLAPLAVWLWPAHTPTGSVWFHVIGLGIACTGIAYILFFRLVAHVGPTRAVSVT 244
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P+ ++ + L +P+ ++++ +
Sbjct: 245 FLIPVFGVLWGILFLDEPLTLNMVAGCAVILLGTSLST 282
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 30/77 (38%)
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
L L ++ FC+F+Y ++ APL + + L + + + R
Sbjct: 63 QWPHLLAVGILNSAIPFCLFAYAELTLTAGFTSVLNAAAPLFAAIVAFVWLGERMSSWRV 122
Query: 288 IVFGIVVIAMVVYLLPT 304
+ I + ++V + +
Sbjct: 123 LGLAIGFVGVIVLVGGS 139
>gi|327470446|gb|EGF15902.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis SK330]
gi|328946873|gb|EGG41010.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis SK1087]
Length = 351
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 78/294 (26%), Gaps = 6/294 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + A I + I +++ L ++ + S L + GV ++
Sbjct: 3 KSRKFIAVILALLAAIFYAINTPFSKVLLNKIPPTLMASFLYLGAGTGVGIMYLFHRKVE 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + + + + S V + + +
Sbjct: 63 EKYEKLNKADLPYTVGMIVLD--IAAPISLMIGINIGSASNASLLGNFEIVATTIIALLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSEG 195
KE++ IA I +S ++++ ++ S+
Sbjct: 121 FKEKVTSKLWIAIGFITISSIVLSFEGAESFKFSLGSLFVILATCCWGLENNCTRKISDK 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E+ +L + L+ + ++ +
Sbjct: 181 STYEIVLLKGFFSGSGAFIVALILGERIPEMKYIMAALLLGFVAYGLSIFMYIRAQRDLG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ AP + + + + + V I ++I V+ + T++
Sbjct: 241 ATKTSAYYAVAPFVGTFLAFIVNGEKLTLVYFIGLVFMIIGCVIVVYDTMVKRH 294
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 6/166 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G+LFV A WG+ T+ + S E++ + +S G F + + +K
Sbjct: 155 LGSLFVILATCCWGLENNCTRKISDKSTYEIVLLKGFFSGSGAFIVALILGERIPEMKYI 214
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + +I A TS Y V P + FL + E+L
Sbjct: 215 MAALLL------GFVAYGLSIFMYIRAQRDLGATKTSAYYAVAPFVGTFLAFIVNGEKLT 268
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ I + +I+ +I+ + + S + + + +
Sbjct: 269 LVYFIGLVFMIIGCVIVVYDTMVKRHSHSHSHIIVHTHDGKTHTHI 314
>gi|317403461|gb|EFV83970.1| hypothetical protein HMPREF0005_01927 [Achromobacter xylosoxidans
C54]
Length = 326
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/303 (11%), Positives = 90/303 (29%), Gaps = 13/303 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G IL+ + +F + + +I+ R+L+++P + S
Sbjct: 11 SRPSSRAAGFFMAALGAILFSAKAIVVKFTYRYGIDAVTLIAFRMLFAMPFFAAVAWHQS 70
Query: 76 G-GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + + + L L F++P + V +
Sbjct: 71 RLAARGEIVVMTWKERLQVCLLGLLGYYLSSFLDFLGLRYITASLERLILFLSPSLVVLI 130
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFA 184
+ + K + Q +A L ++++ H L A+++S Y
Sbjct: 131 SAFWFKRPVERRQWLAMTLSYAGVVLVFAHDLSFGGSAEVLSGSLFVFGSALSYSVYLIC 190
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + +L V + +I L
Sbjct: 191 SGELIKRVGPTRLVAYAMLVSCVACIVQFFVIHPASVLVQPMGVYGYSIIHATLNTVVPV 250
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + T ++ P+ ++ + + L++PI + +V+ + V +
Sbjct: 251 FMLMWAVALIGAPTASLLGMLGPVSVLFLASWFLQEPITVWQMAGTALVLAGVFVLMGGG 310
Query: 305 VIN 307
Sbjct: 311 AAR 313
>gi|291326481|ref|ZP_06124694.2| putative membrane protein [Providencia rettgeri DSM 1131]
gi|291314152|gb|EFE54605.1| putative membrane protein [Providencia rettgeri DSM 1131]
Length = 319
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/285 (14%), Positives = 99/285 (34%), Gaps = 13/285 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M LF A +LW I + + + + +R W+L + L K
Sbjct: 14 MKNLLFPLIAVLLWSINAIVNKAASTAIDPAAISFYR--WALAFLVMTPFVLRSVLRNFK 71
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+K+ + + A + ++ YA + + P+++V + L+
Sbjct: 72 TVMKHWW--QLAILGALGMMLYQSLAYYAAHSVSATFMGIMNSMIPLLTVIISIFVLRVI 129
Query: 143 LNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
I+ ++L + L+ + G+ + V +AY S +
Sbjct: 130 PTVGIILGSILSLCGLVWLVSQGSPSALFSQGLGQGEAMMLVASAAYALYGVLTKRWSIQ 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + ++ F E L + L + + ++ G+ R
Sbjct: 190 LSSWDSLYVQVFFGVIMLLPNFLLAEDVSLNSQNIGLVVFAGIAASIVAPALWIQGVMRL 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+T I AP+ + ++F L + + + I G+V++ +++
Sbjct: 250 GANTTSIFMNLAPVFTAIIAIFALGEELKSYHLIGGGVVLLGVML 294
>gi|150397321|ref|YP_001327788.1| hypothetical protein Smed_2120 [Sinorhizobium medicae WSM419]
gi|150028836|gb|ABR60953.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 317
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 99/300 (33%), Gaps = 16/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + + +L + ++++ + V E+ + R L + + ++ L
Sbjct: 13 QNRISYGLTLMVVSVLLSPLIDIFSKLAVATVPSAEITAIRFLLQVAFILPIVLLRGTVL 72
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L V F+ AL + +FV P+I LGS+F
Sbjct: 73 ------DLTWRKSALHALRGGLLVVTMLSFVTALKVMEVADAIAIFFVEPIILTILGSIF 126
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE + + A + L L++ S + +A+ +A+ A +
Sbjct: 127 LKETIGWRRYTACGVGFLGSLLVIQPSMQEVGLIALLPIVAAFGLAFFLLVTRMVAQSED 186
Query: 199 EMCVLAIPALFYVVWNGFSGGE---------HFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ ++ ++ + L+G G++ + + Y
Sbjct: 187 PWSMQFHAGIWGGLFCLVLLWCGEGTGSAVFDPVWPDGRALYHLLGVGVVATIAGVLGVY 246
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ A S + ++Y + + + D ++ + I++ + + +
Sbjct: 247 AYRAAPASVLAPLQYLEIVSATIFGWLVFGDLPDALKWLGIAIIIGSGLYIIWRERQVHK 306
>gi|302528507|ref|ZP_07280849.1| predicted protein [Streptomyces sp. AA4]
gi|302437402|gb|EFL09218.1| predicted protein [Streptomyces sp. AA4]
Length = 346
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 83/293 (28%), Gaps = 21/293 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G V A + + + + + ++ +V R+ + + F +
Sbjct: 50 RGLSLVLLAAVFFSTSGTLAKPVMGAGMTPEQVAVLRIGIAGVLLLVGTALF----APRT 105
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
++ + +L + A +A + A + F++PV+ V K+R
Sbjct: 106 LRVRRGEWPMLLAYGALGVAGTQLLYFIAAERIPVGIAILLEFLSPVLIALWVRVVRKKR 165
Query: 143 LNHLQIIAALLIILS------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L + + ++ + LL+ A SA F V E
Sbjct: 166 LPRMLWFGMAVALIGLALVAQVWQGLRLDAAGLLAGIGAALCSAGYFLLGERAVADREPL 225
Query: 197 FIEMCVLAI---------PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + I P + L L L + +
Sbjct: 226 GLVTWGMVIGGVLVSVTAPPWTLPLGMAGQTVPFGPWTPPLWLLLLGLVVLSTAIPYVAG 285
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ S ++ P+ + +L + + + + +++ +
Sbjct: 286 ISALRHLPASVASVVGLLEPVTAAAFAWALLGEALAWPQAVGAALLLGGAYLV 338
>gi|262277537|ref|ZP_06055330.1| drug/metabolite transporter [alpha proteobacterium HIMB114]
gi|262224640|gb|EEY75099.1| drug/metabolite transporter [alpha proteobacterium HIMB114]
Length = 294
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 93/295 (31%), Gaps = 18/295 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + +F+ + W + + L V + +R L + +F F+
Sbjct: 1 MQNIKAYIFLVLCTLFWAGNFIVGKVATLFDVPPFTLNFYRWLIAFLILFP----FTYKK 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + Y+L Q PV+ +F S F
Sbjct: 57 IFQNIDEVKNNLIPLSIMGFASITIFNSVVYYSLNYTQVLNGVLMISTIPVLIIFFSSCF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFARK 186
E++ QII + ++ +LI+ L+ G + +A+ + ++
Sbjct: 117 TNEKIKITQIIGVITSLMGVLIIITKLEFNKLLTLNLNKGDLWILVAMISWATYSIMVKE 176
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
F + + + L + G++ + +
Sbjct: 177 KKINLEPFAFLETLIFIGLIFLIPFYFYELYTGQYLQINIPVILTIGYVVLFAGIGAYIF 236
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ I+ S GI + P+ + ++F++ + + + ++ +VV
Sbjct: 237 WISAIQLIGPSRSGIFLHLMPVFSSLMAIFLIGERLANFHIVGASFILTGIVVST 291
>gi|227873159|ref|ZP_03991450.1| DMT superfamily drug/metabolite transporter [Oribacterium sinus
F0268]
gi|227840990|gb|EEJ51329.1| DMT superfamily drug/metabolite transporter [Oribacterium sinus
F0268]
Length = 318
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/310 (10%), Positives = 86/310 (27%), Gaps = 14/310 (4%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLP 65
K++ KE+ G + + ++W + + + + Q+ + +R S
Sbjct: 15 KEQERLLTEKEHPYRERNKGIIILLITTVIWSLAFIAQSTAMNQIGPFAFVFYRHFLSGL 74
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ + +K + +L + +F
Sbjct: 75 CLLPFAFLKPCSKEEKRAGIKGGAI------TGIVLGFASVIQQIGVKETTVGKAAFLTV 128
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWS 179
+ ++ G + + ++ A+L ++ + + GI + +
Sbjct: 129 LYIILIPIFG-LVIGKKPEKKIWFCAILALVGVYFIAIKAGTKFTIGIGDTYIILCSVLY 187
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
A + V + +L ++ F +
Sbjct: 188 AVQIMQVGYYVKKVNISWYMSTQFLAGSLVGLLGFIFFEKFSLMSLKAAFLPIAYAGIMS 247
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ F + SY KR + + ++ T + + L + + I+ +A+V
Sbjct: 248 GAVAFTMQSYAQKRLEDTLASLLMSTTAIYAAIWGWLFLGESLGIREIFGCIIMTVAVVY 307
Query: 300 YLLPTVINSG 309
LP
Sbjct: 308 AQLPEKQKKR 317
>gi|121586651|ref|ZP_01676435.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121726390|ref|ZP_01679664.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|153801401|ref|ZP_01955987.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153818306|ref|ZP_01970973.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227812504|ref|YP_002812514.1| hypothetical protein VCM66_A0898 [Vibrio cholerae M66-2]
gi|298499712|ref|ZP_07009518.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|121549079|gb|EAX59114.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121631138|gb|EAX63513.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124123067|gb|EAY41810.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|126511119|gb|EAZ73713.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227011646|gb|ACP07857.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|297541693|gb|EFH77744.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 341
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 45 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 100
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 101 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 160
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 161 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 220
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 221 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 280
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 281 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRN 331
>gi|313899712|ref|ZP_07833215.1| putative membrane protein [Clostridium sp. HGF2]
gi|312955327|gb|EFR36992.1| putative membrane protein [Clostridium sp. HGF2]
Length = 304
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/304 (12%), Positives = 98/304 (32%), Gaps = 20/304 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + ++WG T + T+ L + L+++ R + ++ +
Sbjct: 2 NERIKGHMLACMTILIWGTTFISTKVLLRDFTPLQILFTRFMIGYLALWAVAPRLTRVKE 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-SVF 138
+ + L + +++ AL Q V+P ++F G +
Sbjct: 62 -------KKEELYFLAAGLCGVTLYFLMENIALTYTQASNVGIIVAVSPFFTMFFGIWLL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFARKT 187
+ R I L+ + +L ++L L + +S
Sbjct: 115 KQTRPGVRFFIGFLIAMTGILCISLEGSQNLALNPKGDLLALGAAIVWALYSTITKKISN 174
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + L ++ +G + L + L ++ F +
Sbjct: 175 FEYTTIPMTRRIFFYGLLCMLPVIMLSGMELPKVEQLTGLNIANILFLGLGASAMCFVSW 234
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ + Y P++ ++SV+ILK+ + V + ++V+ +++
Sbjct: 235 NSAVRILGTVQTSVYIYAVPVVTTLASVWILKETVTIVGVLGIVMIVLGLLLSQNRKGER 294
Query: 308 SGKN 311
+
Sbjct: 295 VWRK 298
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 40/143 (27%), Gaps = 1/143 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+A F + + Y+ + +
Sbjct: 8 HMLACMTILIWGTTFISTKVLLRDFTPLQILFTRFMIGYLALWAVAPRLTRVKEKKEELY 67
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP-IDTVRTIVF 290
FL + F + + + + S VGI+ +P + +++LKQ I F
Sbjct: 68 FLAAGLCGVTLYFLMENIALTYTQASNVGIIVAVSPFFTMFFGIWLLKQTRPGVRFFIGF 127
Query: 291 GIVVIAMVVYLLPTVINSGKNKT 313
I + ++ L N N
Sbjct: 128 LIAMTGILCISLEGSQNLALNPK 150
>gi|323484635|ref|ZP_08089997.1| hypothetical protein HMPREF9474_01748 [Clostridium symbiosum
WAL-14163]
gi|323402018|gb|EGA94354.1| hypothetical protein HMPREF9474_01748 [Clostridium symbiosum
WAL-14163]
Length = 298
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 19/305 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ T+ G L F ++WG T + T+ L S +E++ R + + +
Sbjct: 1 MNNKTLTGHLAAFITILIWGTTFISTKVLLRSFSPIEILFIRFVIGYLAL------WCAC 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + + +L + + I T + +F
Sbjct: 55 PKSFKPADRKQEGYFVLAGLLGVTLYYLFENIALTYTLASNVGVIISIAPFFTVIFTCVF 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFARK 186
+ L+ + + +++ SG L + ++S
Sbjct: 115 LREGHPGARFFCGFLIAMAGIFLISFDSGQTLKLNPMGDILAVIAAVLWASYSTLMKKIT 174
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + I + + W GF FL + + ++ F
Sbjct: 175 GFGYNTVQVTRRIFFYGIILMVPALFWMGFDVKLDQFLEPVMLMNLIFLGLGASALCFAT 234
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++Y +K I Y P++ V+S IL + + + ++ + +
Sbjct: 235 WNYAVKILGSVKTIIYIYMVPVITAVTSALILHEKMTKAMICGIFLTLLGLFL-SEDRRK 293
Query: 307 NSGKN 311
KN
Sbjct: 294 KGRKN 298
>gi|260556985|ref|ZP_05829202.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
gi|260409591|gb|EEX02892.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
Length = 299
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 89/289 (30%), Gaps = 1/289 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASVFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L KD V +L ++ A+ + + + VF +
Sbjct: 69 LLKWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALVFKEHI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 RFKQWLCILLGLCGAVLVVSGDHGFGMPSPYSLLIVLAAIAWGIYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ L + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTLPLLFYSAHLPSEILHATWQANMSVVLLGVFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNWGRKK 297
>gi|229101336|ref|ZP_04232080.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-28]
gi|228682041|gb|EEL36174.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-28]
Length = 310
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 102/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNKNRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGVFILSILLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFQQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKSAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVATIVSITWLNESFGSYQLLGGVCIVLSVIFLTMPQ 298
>gi|220904253|ref|YP_002479565.1| hypothetical protein Ddes_0980 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868552|gb|ACL48887.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 317
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 90/273 (32%), Gaps = 8/273 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
A +L+G + ++ + L Q S ++ R ++++ + A + G +
Sbjct: 46 AHGATLLFGASGIFGK-LCQCSAPMLVCGRAIFAVAALTLAGL----GKKQPPWRGLHAC 100
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ L S T+LA H+ F + + + + P + + S+ +ER + ++
Sbjct: 101 DLLALTISGTLLAAHFVMFFMGIHIGGVAVGTLGFACFPAFTTLIESLIYRERPSFAEMR 160
Query: 150 AALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ L L+ T + V +
Sbjct: 161 GLGMVTLGLVCTTPSFSFAHEGTVGLLLGVASGLAYALVTVGNRRFAGHLPGLQTTWWQN 220
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ VV F + + + L ++ + +F + K ++
Sbjct: 221 TVTAVVLLPFVWRQFSTVSTLDWLWIASLGLLCSALAYVLFINSLTVLKARQAALIITLE 280
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ I ++ +L + G+++ A+ +
Sbjct: 281 PVYAIAAAWLVLGDAPGGRVFLGGGLILGAIFL 313
>gi|84683967|ref|ZP_01011869.1| membrane protein, putative [Maritimibacter alkaliphilus HTCC2654]
gi|84667720|gb|EAQ14188.1| membrane protein, putative [Rhodobacterales bacterium HTCC2654]
Length = 298
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 92/291 (31%), Gaps = 5/291 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G + + A + + ++ L +V ++ R + V +GGL
Sbjct: 4 QNTKAGIILMLGAVFTFAVQDGVSRLLADKYNVYLIVMIRYWFFALFVTVMAARSAGGLR 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T + F IL V IYA + T + P++ L L
Sbjct: 64 RAVATS----QPFLQSFRGVILIVEVLVTIYAFVVLGLIPTHAIFASYPLMIAALSGPVL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A + + +LI+ A+ +A FA + +
Sbjct: 120 GETVGPRRWLAIGVGFVGILIILQPGFAVFAPEALIAVAAALLFAIYGLATRYAARKDSA 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ VV G H+ PD +++ + + + + A+ S V
Sbjct: 180 QTSFFWTGIAGVVAITAVGAFHWEPMERPDWIWMAMLCITGALGHYLLIRCYEVAEASAV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y + + + ++ + I+ + IVV A + K
Sbjct: 240 QPFAYFQLVFVSIIAILFFGESIEWNVALGATIVVGAGLFTAWRERQKGRK 290
>gi|310820026|ref|YP_003952384.1| hypothetical protein STAUR_2759 [Stigmatella aurantiaca DW4/3-1]
gi|309393098|gb|ADO70557.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 285
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 86/279 (30%), Gaps = 14/279 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L++ A +LW + L ++ ++ S R L + +F
Sbjct: 6 LYLLGAAVLWSTAGAAIK-LSTLNAYQLASGRSLIAALVLFLLF------------PEGR 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ ++ A A FI+A F P+ + L V L+ER + +
Sbjct: 53 RRPTLRMLSVAAASAATVVLFIFANKLTTSANAIFLQDTAPLYVLLLSPVLLRERPSRGE 112
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A + ++ L + P V + TI + ++
Sbjct: 113 WVAVPIFLIGLSLFFFDQLSPGQLQGNLVAMGSGVAFALTILGMRAASTEGSAILIWGNL 172
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + + G + + L + +F G++ ++ P
Sbjct: 173 LAGLAFLGPALNSPM-PTLLDIALLAFLGIFQLGMGYALFYRGLRDVPAVEASLLVLLEP 231
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+L V + + + + GI+++A L V
Sbjct: 232 VLNPVWAFLVAGEQPGPWALLGGGIILLATAWRTLLGVR 270
>gi|302384508|ref|YP_003820330.1| protein of unknown function DUF6 transmembrane [Clostridium
saccharolyticum WM1]
gi|302195136|gb|ADL02707.1| protein of unknown function DUF6 transmembrane [Clostridium
saccharolyticum WM1]
Length = 286
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 90/289 (31%), Gaps = 13/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + I+WG + + LE + ++++ R L + S
Sbjct: 1 MKKRLAIGGLILVTIIWGGGFVASDMALESMRPFQIMAVRFLLGTVFMGLI--------S 52
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ V L + F I L +F + VI F+ + L
Sbjct: 53 IRSLGGITKSEVMAGGLMGLALFAGFAFQIVGLQYTTPSKNAFLTALNVVIVPFISYLIL 112
Query: 140 KERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++++ I A++ + + +++ G+ I A+ + V
Sbjct: 113 RKKIGARGIAGAVMSVAGVALLSLDRNFSLGLGDGLTLICAVGFAFQIFLTSEFVKKYRA 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L + G F + L + + + + + K
Sbjct: 173 TVLNFIQMITAFLLSFISLIAFGETQFHVTGKGILSVLYLGVISTTVCYLLQTASQKYVD 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ + + S+ ILK+ + I++ A+V+ L
Sbjct: 233 ETKAAIILSLESVFGTLFSILILKEVVTPRMLAGSMIILAAVVISNLSE 281
>gi|196041385|ref|ZP_03108679.1| transporter, EamA family [Bacillus cereus NVH0597-99]
gi|196027870|gb|EDX66483.1| transporter, EamA family [Bacillus cereus NVH0597-99]
Length = 308
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKFPAPMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|189913357|ref|YP_001964586.1| Putative drug/metabolite exporter [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167781425|gb|ABZ99722.1| Putative drug/metabolite exporter [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 313
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 95/297 (31%), Gaps = 14/297 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF 74
+ S G FV +L+ + + ++S + + R+L++ P + + +
Sbjct: 9 KENSHVEWKGIAFVLTGALLFSAKAVVVKLTYRYEISAIGSLFFRMLFAFPFL--VWMAW 66
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
S K L +L+ + F L L F+ P + V L
Sbjct: 67 SAEKETEKPNLTKKDYWNVLLMGVVGYYLASLFDFVGLKYISAGLERIILFIYPTLVVLL 126
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FLK++++ +I + +L + + +++ + T +
Sbjct: 127 SFFFLKKKIHMREIFSLILTYTGVFLAYGQDVQLGSPKDVSLGAFFILLSALTYAIYLMG 186
Query: 195 G----------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
F ++ + ++ + F + L + +
Sbjct: 187 SGSIVPKLGAKRFTAWALIISSIVVFLHFFIFGTYKELIQPMSFYLLAFVMGTVNTVVPA 246
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ S GIKR T I+ P+ + + L +PI V +I V+ +
Sbjct: 247 VLVSEGIKRVGSKTAAIVGSIGPMSTLFLAYVFLDEPITIVHSIGTLFVLTGVFWIS 303
>gi|152982668|ref|YP_001352239.1| transporter of the DMT superfamily [Janthinobacterium sp.
Marseille]
gi|151282745|gb|ABR91155.1| transporter of the DMT superfamily [Janthinobacterium sp.
Marseille]
Length = 301
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 91/298 (30%), Gaps = 15/298 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIV 72
S ++G IL+ + + + V + +I+ R+++SLP V
Sbjct: 4 SASPERKQFLIGLTIALLGAILFSTKAIVAKLIYRYGVDAVTLIAFRMMFSLPFFIAIGV 63
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + L + K +++ + L L F+TP +
Sbjct: 64 WKARTAVPLTRSEK----GQIVILGLLGYYLSSFLDFLGLQYISVGLERLILFLTPSFVL 119
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCF 183
+ +K ++ L+ A + L +++ +H S A++++ Y
Sbjct: 120 LISIFVMKRKITLLEWAALGISYLGTVLVFVHDARIGGSNVALGSLLVLGSAISYAIYLL 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + V + L +I
Sbjct: 180 GSGELVKRVGALRLVAYAMCVSSVACIVQFFVLRPASMLLQPLAVYGLSMINGFFCTVMP 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + R +T P+ ++ + IL +PI ++ +V+ + +
Sbjct: 240 VFLTMIAVDRIGAATASQAGMIGPVSILFLAALILDEPITGIQLAGTALVLCGIYLLS 297
>gi|104781519|ref|YP_608017.1| hypothetical protein PSEEN2407 [Pseudomonas entomophila L48]
gi|95110506|emb|CAK15214.1| conserved hypothetical protein; putative membrane protein
[Pseudomonas entomophila L48]
Length = 292
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 82/287 (28%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V A L+ ++FL V + ++ V ++ L
Sbjct: 11 NQPLRGIALVVVATFLFASHDGLSKFLGGVYPIIMVVW-----ARYVVHTLLMAGIFLPK 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + A L F L + F+ PV+ L LK
Sbjct: 66 AGFAVLRTRRPLLQTLRALSLLSTSLLFTAGLQYLPLAEATSVNFLAPVLVTALSVPLLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A ++ + +L++ G + SA F +
Sbjct: 126 ERVTLGQWVAVVMGFIGVLVVVHPGGAMFTPAILFPFGSALGFCFYQLLTRKLAAHDSPT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + P L ++ G + + + A + +
Sbjct: 186 TSNFYAGLCNTLIMTALVPFFWQVPAWPHVLLMLALGGCGMTAHLLLTQAFRHAAPALLA 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + Q D + + ++ ++ + +
Sbjct: 246 PFSYCQIVFAGLLGAVVFGQVPDGMSLVGISVICLSGLGAAWMQRRS 292
>gi|241759407|ref|ZP_04757511.1| RarD protein [Neisseria flavescens SK114]
gi|241320189|gb|EER56522.1| RarD protein [Neisseria flavescens SK114]
Length = 300
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/292 (16%), Positives = 111/292 (38%), Gaps = 4/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SLL 81
G L + L+ + LY +++ +S E+ + R++ L + + +G
Sbjct: 6 KGLLAAITSNALFAMLFLYGVWMQPMSGTEIFAWRMVAMLSALCVLMTMVNGWQAAARFA 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ K ++V I A F++ + +G + YF+ P+ + G ++ KE
Sbjct: 66 NNIGRDWKRWLLIVLPTPIFASQLWLFVWGPVNGEGVNIAMGYFLFPLAMMLGGRIWFKE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LN LQ +A L + + SG + V + + +G +
Sbjct: 126 CLNRLQRVAVALACAGVACELVRSG-AFSWTTVWVFGTYPFYYLLRRKLGVPSLIGLAFD 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ I + F++ G ++ + + ++ G+
Sbjct: 185 LMMITPFALAYILLATDTPAMIAAKPVLIFFIVLLGFNSAISMHLNLKANQLLPVAMFGM 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ Y P+L+ + S+ L +P+ I +G++ + V ++ ++ K K
Sbjct: 245 LSYLEPVLLFIVSIVWLDEPVQKGALIGYGLIWSGLCVMIVNGLLGMKKEKK 296
>gi|157691293|ref|YP_001485755.1| DMT family permease [Bacillus pumilus SAFR-032]
gi|157680051|gb|ABV61195.1| possible DMT superfamily drug/metabolite transporter [Bacillus
pumilus SAFR-032]
Length = 291
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 84/288 (29%), Gaps = 15/288 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L++ A +WG + + V LE++ R + + F I
Sbjct: 2 NEKYIGALYLAIAASIWGGMYVVVKVTVAVVPPLELVWMRYAIAGIVLVFTIWRLGYSFQ 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L K M++ + + + + TP V L
Sbjct: 62 LDK-----KDIPLMVLIGLIGNFLSIVTQEIGTMYTSAQMGAVITSATPAFMVLFAFFLL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
KE + + + LL + +M G+ L+ A+ + R
Sbjct: 117 KEAMTVRKCASILLATAGVWLMIGPVAVQTDEFVGGLSLVFAALTWALMSVLLKRVPGKY 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + I V++ L + + F +++ G
Sbjct: 177 PQVVTTTYAIIIAFIVLTPPVLFRLPHLDVEQMARPEIWGGILYLGIISTALAFFLWNRG 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ S+ G+ + P++ + +L + + I + +
Sbjct: 237 LQLMDASSGGLFFFFQPIVGAILGWLLLGEEMGLRSFIGILCIFAGVY 284
>gi|167035013|ref|YP_001670244.1| hypothetical protein PputGB1_4018 [Pseudomonas putida GB-1]
gi|166861501|gb|ABY99908.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
GB-1]
Length = 296
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 87/295 (29%), Gaps = 8/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + + +G+T ++ + S ++ R +++ + G
Sbjct: 1 MNHRTALGALHIGALFFGLTGVFGKLAASASPAIIVFGRAAFAVLALALFASLAGPGWQR 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +G ++ + ++ A+ + + + P +V L + +
Sbjct: 61 LSGQDARRLLLGGVLLAGHWVSF-----FIAVKVGGVAIATLGFASFPAFTVILEGLLFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER+ + + +L+ L L+++T L A+ S
Sbjct: 116 ERIRRNETVLVVLVSLGLVLVTPAFDLASEATGGLLWALLSGLLFSLLSLTNRAGSGRLP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F+ + + + +F + K
Sbjct: 176 AVQAALWQNLVVGLCLLPFAAPGLGGVAPVDWLWIALLGVFCTGVAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T ++ P+ I + + + + +++ A+V+ + +
Sbjct: 236 TAAVVFGMEPVYGIAVAWAVFAETPTVRMLLGGALIIFAIVLSSRLAAEQPPRQR 290
>gi|259415400|ref|ZP_05739321.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259348630|gb|EEW60392.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 295
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 5/299 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ + A T +G L + A I++ + ++ L + +V VI+ R + V +
Sbjct: 1 MEQVMAKNDTRLGILLMIGATIVFALQDGISRHLASEYNVFMVITIRYWFFAAFVITLAL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
SG + + +F A +L + A + + P++
Sbjct: 61 KQSGSVRAA----AQTSQPWVQIFRAFVLVAEICVMVMAFTVLGLVESHAVFVCYPLLIA 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L L E++ + A + + +LI+ A+ +A FA +
Sbjct: 117 ALSGPILGEQVGWRRWAAIGVGFIGVLIILQPGSGVFQVAALIPLLAALMFALYGLLTRY 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ +++ G + PD ++ + + + +
Sbjct: 177 VARRDTTATSFFYTGVYGMIFVTPLGLWWWEPMTAPDWGWMATLCVTGALGHWLLIKCYE 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
A+ S V Y + + + + + T I IVV A + +
Sbjct: 237 MAEASAVQPFAYMQLPWAAMIGLLVFGEDMRTNVIIGAAIVVAAGLFTFWRENLKRAAR 295
>gi|126731317|ref|ZP_01747124.1| hypothetical protein SSE37_06609 [Sagittula stellata E-37]
gi|126708228|gb|EBA07287.1| hypothetical protein SSE37_06609 [Sagittula stellata E-37]
Length = 296
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 92/299 (30%), Gaps = 9/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ G L++ A + + + + + E++ R + + V
Sbjct: 2 NDTLRGCLWMTGAIASFTTMAIAGRAVSLDLDTFEIMLFRSIIGIVIVLSVASLARTRQQ 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ + F+ L + Y++ F P + + + L
Sbjct: 62 ITTRSMHLHGIRNICHFAGQNL------WFYSITVIPLAQVFALEFTLPFWVMLMSPLVL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL +I+AA + +LI+T + L + +A FA +
Sbjct: 116 GERLTKNRILAAAAGFIGILIVTRPAPETLEFGQLTAALAAIGFAGSAVFTRLLTRTESI 175
Query: 200 MCVLAIPALF--YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
C+L + L +++ + + A +
Sbjct: 176 TCILFWLTVMQAAFGLVCAGFDGDIALPQAESWPWVVVIAFAGLVAHFCLTTALSLAPAT 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
V +++ ++ + + +P+D I ++ A + + + +++
Sbjct: 236 VVMPIDFARLPVIALVGALLYAEPLDPFVLIGAAVIFSANYLNIRFETRANRAESARRA 294
>gi|84514703|ref|ZP_01002067.1| putative transporter, RarD family, DMT superfamily [Loktanella
vestfoldensis SKA53]
gi|84511754|gb|EAQ08207.1| putative transporter, RarD family, DMT superfamily [Loktanella
vestfoldensis SKA53]
Length = 306
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/303 (14%), Positives = 96/303 (31%), Gaps = 13/303 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G +F + ++ + + V + + R ++LP +F +
Sbjct: 1 MQPLKGIVFKVVSVCMFMAMAGLIKAASETVPPGQAVFFRSFFALPIIFGWLALRGELRH 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T + + G L + + P++ V ++FL
Sbjct: 61 GWKTT-----NTVGHFWRGLVGTSAMGLGFAGLGLLPLPEVTAIGYAAPLLVVIFAAMFL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGS 192
E + ++ A L ++ +L++ A+ V A A + V
Sbjct: 116 NEDVRAFRLSAVALGMIGVLVVLSPRLSVGASLNTAETLGAVVVLMGAVLTALAQVFVRK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + + + P L+ GLL + +
Sbjct: 176 LVATETTSAIVLWFTVTSSLLALLTIPWGWVTPTWPIAALLVMAGLLGGVGQIFLTSSYR 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A S V +YT+ +L + FI + I GIV++A V+ + +
Sbjct: 236 FADASLVAPFDYTSMILALAIGYFIFDEVPTGTMLIGAGIVILAGVLIIWRERKLGLQRA 295
Query: 313 TKK 315
++
Sbjct: 296 QQR 298
>gi|228922091|ref|ZP_04085402.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228837699|gb|EEM83029.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 294
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 94/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMAIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIGELQTSSIGTVNTYVILGVLYLGIVSTAGASFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 DLMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGMLIICSVFITTFEK 293
>gi|254224756|ref|ZP_04918372.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125622819|gb|EAZ51137.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 341
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 45 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 100
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 101 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 160
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 161 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 220
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + E +L + ++ I
Sbjct: 221 WTLIYLQGVCAVFMLIPLWLTSETLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 280
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 281 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRN 331
>gi|212705042|ref|ZP_03313170.1| hypothetical protein DESPIG_03110 [Desulfovibrio piger ATCC 29098]
gi|212671524|gb|EEB32007.1| hypothetical protein DESPIG_03110 [Desulfovibrio piger ATCC 29098]
Length = 289
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 89/284 (31%), Gaps = 11/284 (3%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A + G L+ ++ + + R + + + L
Sbjct: 6 LAAAMFIVGSIGLFVHYI-PLPPAVIACTRAVIGTLFLLLVLRLKKTPLHGQAIRKNALC 64
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ S L +W F A + + Y++ PV + L + L ERL +I+
Sbjct: 65 LLL----SGAALGFNWIFLFEAFRHTGIAVATLCYYMAPVFVILLSPLVLGERLTRRKIV 120
Query: 150 AALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LL +L + ++ ++ +A + + C L
Sbjct: 121 CTLLAVLGAVCISGVFTGSRQDPRGIAFGLAAALLYCSLILLNKRLRGLDTLETTFCQLC 180
Query: 205 IPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL + + G H L L+ + V+ +F + R T ++
Sbjct: 181 TAALVMLPYVLLGGHLHGLAPEPFTLFLLLVVGIVHTGLVYILFFSAVGRLPAQTTAVLS 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P+ I+ + L QP +++ A + LP
Sbjct: 241 YVDPVTAILLATLFLHQPFGPAELCGTVLILGATLANELPGNRT 284
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 40/133 (30%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ + +A + I I LF ++
Sbjct: 1 MEKIKLAAAMFIVGSIGLFVHYIPLPPAVIACTRAVIGTLFLLLVLRLKKTPLHGQAIRK 60
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ L L+ G F + + ++ + Y AP+ +I+ S +L + + + +
Sbjct: 61 NALCLLLSGAALGFNWIFLFEAFRHTGIAVATLCYYMAPVFVILLSPLVLGERLTRRKIV 120
Query: 289 VFGIVVIAMVVYL 301
+ V+ V
Sbjct: 121 CTLLAVLGAVCIS 133
>gi|172063725|ref|YP_001811376.1| hypothetical protein BamMC406_4706 [Burkholderia ambifaria MC40-6]
gi|171996242|gb|ACB67160.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria MC40-6]
Length = 319
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 84/290 (28%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P ++ +
Sbjct: 2 KTRLIGYLYLGAAMAGVGSTVIASRLAAGGLPPFAATALRFLIATPLLYALMRAQRMRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ AV +LV +A + I P +S + ++ L
Sbjct: 62 RICA----RDAVLLLVQAAAGGVGYTVLLISGTKLSSPIDAGVMLGTLPAMSTLIAALVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
+ER AA L +L +T G + SL AV A
Sbjct: 118 RERQTPRDWGAAALATTGVLFVTFAPGQAMPSLRTLAGDALVLAAVACEAVFILLNRRLS 177
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L V + + + +
Sbjct: 178 TPLPPLALSTAMSGLGFMLALVPAAFEWHALATGWTAGAVSAIAYYALVPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + R +VV M+V
Sbjct: 238 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLGGTRLFGIALVVTGMLV 287
>gi|150388721|ref|YP_001318770.1| hypothetical protein Amet_0889 [Alkaliphilus metalliredigens QYMF]
gi|149948583|gb|ABR47111.1| protein of unknown function DUF6, transmembrane [Alkaliphilus
metalliredigens QYMF]
Length = 301
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 96/292 (32%), Gaps = 12/292 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
M +FV A ILWG T F Q + + + + R+ + G
Sbjct: 1 MEQSKMRAQVFVLMAAILWGTTGSAQAFAPQNATPIVIGALRMAIGGTFLLLVARVRGGF 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +K K +LV ++ +A + F + L + + + +
Sbjct: 61 KTKIKVDKK------LLVIASICMAFYQPLFFSGVFKTGIALGTVLALGSAPVFSGIIEY 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAYCFARKTIPVGS 192
F+ E+L+ +I +L I+ ++ + + ++ S + + + +
Sbjct: 115 FIGEKLSKRWLIGTILSIIGCTLLFGGQDSMNVDVLGSSLSLGAGLSYAIYVKVSKKLFE 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ + + + + L + + + +F+YG+
Sbjct: 175 NSRRDEVNGLVFFISAIILSPILLMNDLSWVMSTRGIMTTLHLGIVTAALAYTLFAYGLV 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ PL + VF+ + +V I ++ +++ P
Sbjct: 235 NTSTPKAVALTLAEPLTAAMLGVFMFNEIFTSVSMIGGLLLFCGLIINSYPE 286
>gi|330813270|ref|YP_004357509.1| drug/metabolite transporter (dmt superfamily) [Candidatus
Pelagibacter sp. IMCC9063]
gi|327486365|gb|AEA80770.1| drug/metabolite transporter (dmt superfamily) [Candidatus
Pelagibacter sp. IMCC9063]
Length = 273
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 88/272 (32%), Gaps = 7/272 (2%)
Query: 40 TPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSA 98
+ + + E++ R L+ L +FF I L K + + + A
Sbjct: 1 MDILVKIMSASYPTGEIVFFRGLFGLIPIFFII------PRERYKNLFQTKKLKLHLARA 54
Query: 99 TILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL 158
I + A+ F PV + + LKE + + +A ++ + +
Sbjct: 55 FIGTFGMLWIFLAVKYLPIAEAITITFAAPVFATIFSMIILKEVIKVFRWVAIIIGLAGV 114
Query: 159 LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
+I+ ++ F I + + + L + S
Sbjct: 115 VIILKPGTELFTIYSLFPLMFCLFFGIIAILIKKLSKTEPDYLIATFFTLAVIFCGSISL 174
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
F + D + LI G+ S + +++ +S V ++Y + ++ + V I
Sbjct: 175 FFEFKMPTARDFVPLILIGIAGSAGNIFLTMSLRKGSISAVTPIKYLSLIIATFAGVLIF 234
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + +++ + + I + K
Sbjct: 235 DEIPYFTTYLGAALIIASSFIIFKREEIKNKK 266
>gi|226309805|ref|YP_002769699.1| hypothetical protein BBR47_02180 [Brevibacillus brevis NBRC 100599]
gi|226092753|dbj|BAH41195.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 311
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 86/300 (28%), Gaps = 17/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L + LWG+ + ++L L V + R+ + I + L
Sbjct: 1 MKNNERLLFLMLAGVVTLWGLNVVMVKYLTTFPPLYVAAIRMTVGGICLSPLIFLYRKSL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K + A+ +A+H + S + P+ + L +F
Sbjct: 61 RFSKTDW-----FLLAGVGASSIALHQITLAAGVQYTTAGNASLILGLNPLATALLAMLF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L E ++ + + + +LI+ + L + +
Sbjct: 116 LGEGMSLKKGLGIGMGFAGVLIVVISQHGGLHMNGWGDAIMFFSMLMYVTGGLLIRKLVV 175
Query: 199 ------------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + S + + + L +
Sbjct: 176 RGVPVLLITALSQTFGVIFLWGVALTVQPASYYFSLDVSSFQWLVIFASGALSTALGSVG 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++YGI++ S + P+ +V + L + + V + ++V + + V
Sbjct: 236 WNYGIRQLGASRTAVFLNGMPMASLVFAAIFLGESLQLVHLLALCMIVGGVYLGSRSLVR 295
>gi|302337072|ref|YP_003802278.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
gi|301634257|gb|ADK79684.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
Length = 293
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 85/286 (29%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +F A +LWG + + + ++ + R + + + + G L + +
Sbjct: 8 VLALFAAPMLWGGALVAGRVVSAEMPPISAAFVRFVVTTTLLALFLRIRGGKLPKPEKNI 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ T +A+ F AL T ++ +TP + + ++ KE+
Sbjct: 68 ----LPALIAAGMTGVALFNVFLFSALATVSAGRSAVIIAMTPAVVAMISAIIYKEKHQK 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L +A +L L I+ G + + + + +
Sbjct: 124 LFPLALILAFLGAAIVISEGDPPSLFRTPPGKGELFMIGCVFSWAAYSFAGKHVLKSFPP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L + F L + YGI +
Sbjct: 184 LPAIMYSSFFGALLLAIPAFLEGGLPRVFSASPSAWAGLLYMSIGAAGVAHVFYYYGISK 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S I P+ + + +L + I I +V+ + +
Sbjct: 244 IGPSKSAIFMNLEPISALFFGMVLLGEEITMPLAIGSVLVLSGVSL 289
>gi|83944254|ref|ZP_00956709.1| membrane protein, putative [Sulfitobacter sp. EE-36]
gi|83844798|gb|EAP82680.1| membrane protein, putative [Sulfitobacter sp. EE-36]
Length = 302
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 83/294 (28%), Gaps = 5/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S +G + ++ + ++ L + +V+ V+ R + V +GG
Sbjct: 13 QSNNIPLGITLMVITTFVFAVQDGLSRHLASEYNVMMVVMIRYWFFAAFVIALAKRHAGG 72
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + +F +LA I A + + P++ L
Sbjct: 73 LRAA----ARTSQPVLQIFRGLLLAAEICVMIVAFTILGLVESHAVFTCYPLLVAALSGP 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E + + A + + +LI+ A+ +A FA +
Sbjct: 129 VLGESVGWRRWAAIGVGFIGVLIILQPGMSVFDPAAVIPLVAAAMFAIYGLLTRYVGRKD 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ V +G ++ D L + + + + A+ S
Sbjct: 189 KTATSFFWTGVTGSVAMTATGLWYWEPMIASDWLIMGCLCITGVTGHWLLIRCYEVAEAS 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V Y + + + + + I ++V A +
Sbjct: 249 AVQPFAYLQLVFAAIIGISAFGETVRPNVAIGAALIVAAGLFTFWRERQKGRAR 302
>gi|110803349|ref|YP_698065.1| integral membrane protein [Clostridium perfringens SM101]
gi|110683850|gb|ABG87220.1| putative membrane protein [Clostridium perfringens SM101]
Length = 308
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 96/304 (31%), Gaps = 10/304 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + + I +G LE + + + R SLP + I+ L
Sbjct: 2 KLKGIILTMLSSITFGFAFTLGPMTYGLEGSNPVTLTFLRNFLSLPFLLVIILLLKIDLR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K L++ +G + + T L ++ F + ++ FVT +F
Sbjct: 62 VTKKQLRDLIILGFVGNAITTLMLNMAFACIDVGIVTPIHFTYPIFVTLGCVIFFHEKLS 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+++ L I + + + + S L + + ++ F I G E
Sbjct: 122 KQKVFALIIAMSGIGCFFITALNSASFGKSTLLGLILAVASGIFYAFYIIFMDKSGLKSE 181
Query: 200 MCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L + L I L + IK
Sbjct: 182 PPFKITFYVAIASTVGMFIYGMLTKELVLSSLTHKAWGLSAIFAFLCTVVALSLLQVCIK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S ++ P+ ++ +L + I ++ I ++ +++ K
Sbjct: 242 YIGASEAAVISTFEPITSVIFGAILLGEEITLMKIIACSLIFAGVLILSFAKEKTKSNIK 301
Query: 313 TKKS 316
K+S
Sbjct: 302 IKES 305
>gi|116748370|ref|YP_845057.1| hypothetical protein Sfum_0926 [Syntrophobacter fumaroxidans MPOB]
gi|116697434|gb|ABK16622.1| protein of unknown function DUF6, transmembrane [Syntrophobacter
fumaroxidans MPOB]
Length = 305
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 86/295 (29%), Gaps = 17/295 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + C + WG T + + ++ R + + +F + G + L
Sbjct: 3 YLKLICTAVFWGGTFVAARIAAREMEPFSAAFLRFVTASVFLFGFVFKSHGKIPPLD--- 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ T + + F L T S P L S F +E+L+
Sbjct: 60 -RRHFPFVLLLGLTGVFAYNACFFAGLKTITASRASLIIATQPAFIALLSSWFFREKLDS 118
Query: 146 LQIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L+I +L I + + G + + + S
Sbjct: 119 LKIPGIMLSIAGAVTVISRGHPLTLFSNSIGPGEAYILGCIASWVSYTLIGKAAMKSLSP 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGG--EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ A+ + + G L ++ F + GIK
Sbjct: 179 LTAVTWSCGVGAVCLLPFALAEGILRSIGEFSLTAWVGILYLGFFGSALGFFWYYEGIKA 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ GI P+ IV + IL + +D +VV + + + S
Sbjct: 239 IGAARAGIFINLVPVSSIVLACLILDETLDASLAAGAVLVVSGVYLTNRSPLFRS 293
>gi|325916317|ref|ZP_08178595.1| putative permease [Xanthomonas vesicatoria ATCC 35937]
gi|325537488|gb|EGD09206.1| putative permease [Xanthomonas vesicatoria ATCC 35937]
Length = 292
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 54/292 (18%), Positives = 98/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L F Y + I+ + + LE + + VL+ + V F
Sbjct: 3 LKGVLLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPDDQLR 58
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L VFLKE +
Sbjct: 59 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVVFLKEEV 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A ++ + +LI+ L +A A I + + + +
Sbjct: 119 RWRRWTAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVIALRMAGHSEKRLTLY 178
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V G F ++ L GYGLL Y + A +S V +
Sbjct: 179 GAGVIGPLVMGGILMLPSFVWPSLYQWGLLAGYGLLAGLAAICMMYATRLAPVSVVAPTQ 238
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I F+ +D + +++ A + L+ S + K
Sbjct: 239 YSQMLWAIAFGYFLFHDHLDWPMGVGIALILGAGLFTLIREEQVSRWWRRTK 290
>gi|261880832|ref|ZP_06007259.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332448|gb|EFA43234.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 309
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 85/293 (29%), Gaps = 15/293 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + A + +G PL L ++ V+ +R ++ ++
Sbjct: 2 NSRVKGFIAGVLAAVFYGTNPLGALPLYAERITSGNVLFYRYGITMLLFAMWMLMKKENF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ ++ + + + S F P+++ L VF
Sbjct: 62 KIKWGHAVK------FAILGSLFGLSSATLFMSFHFMSAGVASTILFSYPIMTAMLMVVF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGS 192
ER+ A L I + ++ G ++ + + + A
Sbjct: 116 YHERITWGTTFALALAITGIGMLYRGDGGQPLNVTGVMLVLASSLFYALYIVYVHQFKTE 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI-PDTLFLIGYGLLNSFVFCIFSYGI 251
V+A L + + F+G L + L + I
Sbjct: 176 MSVVKYTFWVIAFGWLTIIGYMIFAGDPLQTLNTPKEWLCVIQLAVLPTLLSLYFINVSI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + I+ P+ ++ S + + ++V A+++ +L
Sbjct: 236 QLIGSTPTSILGALEPVTAVMISTLVFSEVFTWRLASGIALIVAAVILIILRK 288
>gi|213021840|ref|ZP_03336287.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 248
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 2/243 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T G L AY +WGI P Y + + V E+++HRV+WS + A++ S
Sbjct: 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMV-ALLSVSRQWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K LK PK + +L SA ++ +W FI+A+ S YF+ P++++ LG +FL
Sbjct: 62 QVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER +Q +A +L + +L+ G P+++L +A +++ Y RK I V + G +
Sbjct: 122 GERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E L A Y+ S H + L L+ G++ + F+ R +LST
Sbjct: 182 ETLWLLPVAAIYLFSIADSATSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241
Query: 259 VGI 261
+G
Sbjct: 242 LGF 244
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 40/128 (31%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
+ A + + V + E + + + + L L
Sbjct: 18 FIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVALLSVSRQWRQVKRLLKTPKKIFLLA 77
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+L + +F + + + + + PL+ I+ + L + ++ + + V
Sbjct: 78 LSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIFLGERFRRMQWLAVILAV 137
Query: 295 IAMVVYLL 302
++V L
Sbjct: 138 CGVLVQLW 145
>gi|86605690|ref|YP_474453.1| hypothetical protein CYA_0991 [Synechococcus sp. JA-3-3Ab]
gi|86554232|gb|ABC99190.1| putative membrane protein [Synechococcus sp. JA-3-3Ab]
Length = 302
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/302 (9%), Positives = 83/302 (27%), Gaps = 8/302 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
E + G A + + + E++ R L+ + ++
Sbjct: 5 AERRNKRAWQGVALKLLATFCFACLGAIIRLNTPALHPFEIVFLRNLFGFLALVPLLLRA 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + I V +A + FV + + +
Sbjct: 65 G-------IHSLRTAKMSFYLLRSAISTVGMLLSFWAASLLPLAEATALSFVQLLFAGMM 117
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L E++ + + L ++ +M +A F I +
Sbjct: 118 AVWVLGEQMRPSRWLGLGLGVVGTWVMLRPGFREFSLGTGLALAAALLFGWVIIVLKILA 177
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + A L + + + + L++ GLL S + K A
Sbjct: 178 RTESSLTITAYMGLLQTPLSFLAAVWVWTWPSPEQWLWMAAMGLLGSLGQVALTQAYKLA 237
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+++ + ++++ L + + + D + +++ +
Sbjct: 238 EVTMLLPLDFSRLLWASLIGFWAFAELPDGWTWLGGALILAGATSGAYGEARRRVRKTQA 297
Query: 315 KS 316
++
Sbjct: 298 RT 299
>gi|114048930|ref|YP_739480.1| hypothetical protein Shewmr7_3442 [Shewanella sp. MR-7]
gi|113890372|gb|ABI44423.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-7]
Length = 294
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 116/297 (39%), Gaps = 9/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + A +++G T L+++ + +S L++ R + + + I + L
Sbjct: 2 SQTAKPSGLIELHLAVLMFGGTALFSKLI-PLSALDITFLRCVVAALVLALLIKFRGKYL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
SL + + + + I+++HW + A+ + ++F PV++V +
Sbjct: 61 SL-----ASKQDYLVAIGLGVIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVIAEPLL 115
Query: 139 LKERLNHLQIIAALLIILSLLIM---TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ + II+ +L+++ ++++ L + + + + AR +
Sbjct: 116 TGNKIKLMDIISGVLVLIGVVLLIPEANLGNDTTLGIVVGIVSAMLFTARNLLQKRFFSQ 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V + E + L ++ + + +F+ +++
Sbjct: 176 YSGPHAMFYQTLVAAVFLMPWHQTELQTISLETWGLIVLLGVVFTAAPHALFTSALRQLS 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
TVG++ P + ++ IL + ++ I I+V + + + + K
Sbjct: 236 AKTVGLVSCLQPFYGAMLALVILGEALNLNTLIGGTIIVTTAIFETHQSHQSQRRKK 292
>gi|295111681|emb|CBL28431.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Synergistetes bacterium SGP1]
Length = 374
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 72/279 (25%), Gaps = 13/279 (4%)
Query: 37 WGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + L + ++ R + + + +AV V
Sbjct: 46 WGGSFTVVKVLLDLYPPNWLLFLRFSCGSALLLLFF--------HRRIGRMSRQAVAGGV 97
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
L LL +F + L +F + A +
Sbjct: 98 VIGVALFGAILCQTLGLLFMAPGRQAFLVSTYVLFVPLLLWLFRGLFPGWHTLAATCTCL 157
Query: 156 LSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
+ + ++T G + + A + + + + +L +
Sbjct: 158 IGMALLTSDLSGPLGRGEALTVLCALFFALQIIAISRYSAQCDPISLTFVQFTVLSLLTL 217
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
F + + + K S I+ + +
Sbjct: 218 AAALLFERPLQFHWRRGLPELAFAIVFCTFLCYLVQICAQRYTKASHAAILMSLESVFGL 277
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ SV L +P ++ +++++ L ++ G+
Sbjct: 278 LWSVIFLGEPTSLRMLFGCLLIFLSVLLVELEPLLKRGR 316
>gi|304393120|ref|ZP_07375048.1| RhaT family transporter [Ahrensia sp. R2A130]
gi|303294127|gb|EFL88499.1| RhaT family transporter [Ahrensia sp. R2A130]
Length = 299
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 91/291 (31%), Gaps = 6/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + +++ + ++ L +V V + R + VY + +
Sbjct: 14 QNNRLGVGLMCATMLIFAFQDMLSKHLAGTYNVYMVTAIRYW----VLAALAVYLTARHA 69
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +L + A + + TP++ L L
Sbjct: 70 DGFRATIRSGTPKLQLLRGVLLVAQICVMVSAFVLLGLIEAHAIFASTPLVIAALSGPIL 129
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ + A + + +LI+ A+ A FA ++
Sbjct: 130 GERVGWRRWTAIGIGFIGMLIILRPGFGVFSPYALVAVVGAMMFAVYSLLTRHVAHVDGP 189
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ V+ G H+ D +F+ ++ + + A+ S +
Sbjct: 190 QTSFFWVSIVGVIIITPIGLWHWQTMTPLDAMFMAMLCCTSAAGHYMLTRVYSIAEASVI 249
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y + + ++ +L + + T I +VV+ +Y L + K
Sbjct: 250 QPFTYLQLVFASILAMLVLGEVMQTTTAIG-SLVVVGAGIYALLRERSLRK 299
>gi|153821064|ref|ZP_01973731.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|254850101|ref|ZP_05239451.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|126521438|gb|EAZ78661.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|254845806|gb|EET24220.1| conserved hypothetical protein [Vibrio cholerae MO10]
Length = 341
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 45 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 100
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 101 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFMSLPLLNKPISA 160
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 161 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 220
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 221 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 280
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 281 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRN 331
>gi|254505927|ref|ZP_05118072.1| transporter, drug/metabolite exporter family [Vibrio
parahaemolyticus 16]
gi|219551150|gb|EED28130.1| transporter, drug/metabolite exporter family [Vibrio
parahaemolyticus 16]
Length = 298
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 95/295 (32%), Gaps = 16/295 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F+ + + + + +++ + + E+++ R L SL + I K
Sbjct: 12 GVRFMLLSALGFALMSACVKYVSVHGIPLFEIVAARALVSLVISYIDI--------KRKR 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L + + Y++ T + +V PV + LG +FLKER+
Sbjct: 64 LSIWGNNKPLLFLRGAVGTLALMCVYYSVTTLPLAEATILQYVHPVFTALLGLLFLKERI 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC------FARKTIPVGSSEGFF 197
+I L + L +M S + + + + + V
Sbjct: 124 QIATLICIALCLAGLGLMVQPSMANNATQELPLFSVMMALLGALGSSIAYVVVRKLSHTE 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ + + + F + ++ T+ L+ G+ + ++
Sbjct: 184 DSSVIIFYFPMVALPTSIALMWNDFVMPSLFITMMLVLVGVFTQIGQYGLTKAMQTQAAG 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
Y + + V + + + G++V ++ + + + +
Sbjct: 244 QASAYSYVQIVFSTLIGVTLFNEIPSIWTYMGGGLIVTGALINVFGKQLLPVRPR 298
>gi|160938372|ref|ZP_02085727.1| hypothetical protein CLOBOL_03270 [Clostridium bolteae ATCC
BAA-613]
gi|158438745|gb|EDP16502.1| hypothetical protein CLOBOL_03270 [Clostridium bolteae ATCC
BAA-613]
Length = 298
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 93/292 (31%), Gaps = 11/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
GT+ WG + Q+L + + +++ R+ ++ + A G
Sbjct: 5 KRQTAGTIMALVGGTCWGFSGCCGQYLFEQKGIEAPWLVAVRLFFAGIILVLAGFKLHG- 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ K + +L F+ + + A+ + +++P++ + + +
Sbjct: 64 RENLRVFRKKRDTIHLLAFAIFGITFCQFTYFMAIQASNAGTATVLQYLSPILILAVVCM 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L++ A L + ++ H I + + A ++ G
Sbjct: 124 RELRLPKGLELAAIGLSLFGTFVIGTHGDIHSFHITGEALFWGLLAAVSSMIYTIIPGGL 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL-------FLIGYGLLNSFVFCIFSYG 250
I + F + + G + G N + + F ++ G
Sbjct: 184 ILKYDIYQVLGFGMFFGGIAMGAVVQPWNYGVVWDAGTLGALAGVVVVGTAIAFGLYLQG 243
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ IM P+ +V SVF L + F +++ A+ V
Sbjct: 244 VSMIGPLKGSIMGSVEPVSAVVISVFWLGTRFTLPDFLGFALILGAVFVLTF 295
>gi|153009987|ref|YP_001371202.1| hypothetical protein Oant_2661 [Ochrobactrum anthropi ATCC 49188]
gi|151561875|gb|ABS15373.1| protein of unknown function DUF6 transmembrane [Ochrobactrum
anthropi ATCC 49188]
Length = 319
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 14/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M+G + ++ + E V V ++I R +++ + + + +
Sbjct: 16 TNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYLGWRGQLSGV 75
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + +AL + +P+I+V LG+V L
Sbjct: 76 FRTQ-----NGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAVILH 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + A L+ + ++++ G A A +A A + V
Sbjct: 131 EVVRFYRWSAVLIGLGGVMVIIWPRLTVFSGGSMGHDEAMGAFAALGAAILSAVAMMLVR 190
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ ++ V + S + + N L+G G + +
Sbjct: 191 RLVQTERTSTIVIYFSISASVISLVSFPFGWIVPNWSQLAMLVGAGFAGGVGQILLTECY 250
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ A +ST+ EYT+ LL + + IV+ A + S
Sbjct: 251 RHAPMSTIAPFEYTSMLLGLAIGFLLFGDIPTFEMLAGSAIVMAAGGFIIYREHKLS 307
>gi|116630225|ref|YP_815397.1| DMT family permease [Lactobacillus gasseri ATCC 33323]
gi|116095807|gb|ABJ60959.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus gasseri ATCC 33323]
Length = 309
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 100/307 (32%), Gaps = 16/307 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 6 TRSRLWTILAALAAVMWGISGLFAESLFKISSKITPIWLTQIRLIISGVVLLIIAAIL-- 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ + L F+ + + + F+ P + +
Sbjct: 64 HQKPFSILKNKKNTLHIIAYGVFGLLPVQIFYFIVIEMANASIATILQFIGPFFVLAYLA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTI 188
V ++ L L ++AA++ + + +++ H + ++ A
Sbjct: 124 VTHQQVLRKLDVLAAIMAFIGVFLLSTHGNLNHLAITPVALFFGLLSALGEASYTLIPVK 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V + + L V+ + + L F I +
Sbjct: 184 IVKRISSLVLTGWGMIFAGLGLVIVHPSFPAIPN--TSKVWLWVGAIIILGTIVPFQIMA 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K STV +++ PL V SV I + + + +V++A++
Sbjct: 242 NALRYVKPSTVSLLDAFEPLSATVGSVLIFGLVMSGMDWLGTFLVIVAVLALNFTPKRKI 301
Query: 309 GKNKTKK 315
K K+
Sbjct: 302 KKIPEKR 308
>gi|13474472|ref|NP_106040.1| hypothetical protein mlr5364 [Mesorhizobium loti MAFF303099]
gi|14025225|dbj|BAB51826.1| mlr5364 [Mesorhizobium loti MAFF303099]
Length = 307
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 96/293 (32%), Gaps = 13/293 (4%)
Query: 14 LSKENASLPTMM-----GTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGV 67
+++ A + G L + L+ + ++L SV +V+ R + + +
Sbjct: 1 MTQPVAQNSKIRNVLLAGILLMLAGDFLFALNDAMGKWLVASFSVGQVVLIRSIGAFFVL 60
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
I + + + + + + F A++ Y
Sbjct: 61 GPMIAHQGTAKLF------RMERPELQILRVVMTTLDTALFYAAVVYLPLADVMSFYMAG 114
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
P+ L + L E++ + +A LL ++IM S + + FA
Sbjct: 115 PIYVAALSHLLLGEKVGWRRWVAILLGFCGVVIMLKPSSAAFSLSSSFALAGSIAFAFAI 174
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I G V +V + G + + D ++ G+++ +
Sbjct: 175 ILNRRLRGTSDTNLVTWQTIGTLLVGGVLTIG-AWQTPSALDFGAMLLLGIVSCSAHLMI 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ +K A ST+ + YT L +V + I GI+V+A +
Sbjct: 234 TRALKLAPASTLAPLHYTLLLWAVVFGLVFFGDVPGPRILIGSGIIVLAGLFI 286
>gi|220931439|ref|YP_002508347.1| permease of the drug/metabolite transporter (DMT) superfamily
[Halothermothrix orenii H 168]
gi|219992749|gb|ACL69352.1| permease of the drug/metabolite transporter (DMT) superfamily
[Halothermothrix orenii H 168]
Length = 293
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 80/269 (29%), Gaps = 10/269 (3%)
Query: 35 ILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
+WG T + L I+ R + + ++ + + + V
Sbjct: 23 TVWGTTFPVMKMILVDTDPFYFIALRFMVAFLALYLVFH------KKVTRDDFSGETVRK 76
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
V L + F I L ++F ++ V+ L + +K+ L
Sbjct: 77 GVILGLCLLAGYAFQIVGLQYTTASRSAFITGLSVVMVPLLSIMIIKQIPGPYTWTGVAL 136
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---FFIEMCVLAIPALFY 210
+ L ++T I + + A FA + + + + +
Sbjct: 137 ATIGLYLLTGAGKIAVNLGDYLTFFCAVSFALQIVLLSKYLPGNKPVVLTLIQMAVVGGG 196
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ + + L + + I SY + + G++ P+
Sbjct: 197 SFLVSLFSNGITGVTGPALGVIIYTGLLATAMAYLIQSYAQQFTPPTHTGVIFTLEPVFG 256
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ S IL + + ++V M++
Sbjct: 257 ALFSYLILGEVMGFTGLFGGLLIVTGMLI 285
>gi|324324620|gb|ADY19880.1| putative transporter, DMT family protein [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 308
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + +
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLRIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHTRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTTIVIGWGMLIGGIALLICNRSFEWDQLSQTFTLKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|226310446|ref|YP_002770340.1| hypothetical protein BBR47_08590 [Brevibacillus brevis NBRC 100599]
gi|226093394|dbj|BAH41836.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 308
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 93/285 (32%), Gaps = 15/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + C LWG + +FL S L + + R L ++ + + + +
Sbjct: 11 IVLLLCTSFLWGGNFVVGKFLVGHASSLTLTNLRWLIAVVCLLPVV-----WIREKRIFP 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++V T +A+ F +AL + PV + + +++
Sbjct: 66 TREALLPLIVMGVTGVALFNLFMFWALERTDATNVGLLSTLNPVSIAIFSFLLMGDKIRP 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIPVGSSEGF 196
LQI+A L+ +L++ +A ++ +
Sbjct: 126 LQIVAMLVSFTGVLVVMTKGDFAHLSQLHFNTGDLWMLAAVAMWGIYSVCARWAMKTVSP 185
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ I + ++ + + +++ G+++
Sbjct: 186 MMSTLYSGIFGVALMLPFNVTTFTISNTDWTFWLSLFYVGVMATVVSMVLWNVGVQKVGA 245
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ G+ P+ + + +L + + ++ + IV++ ++
Sbjct: 246 TSAGMFLNFNPIFTAILAFLLLGERMTIIQLLGSVIVIVGCYMFS 290
>gi|209552315|ref|YP_002284230.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539427|gb|ACI59359.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 301
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/290 (9%), Positives = 80/290 (27%), Gaps = 14/290 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++ + + W + + + L ++ +E+ + R + + + +
Sbjct: 19 LVAFAAIVVTILFWASSFVVIRICLGPLTPVELATARYVAAGVIALVYLAIYRPMPE--- 75
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V + + + +A + T SF PV + + + L ER
Sbjct: 76 ----KRDFVRLSIAAVLFIAAYAILLNTGEQTVAAGPASFIINTMPVFTALIATFALGER 131
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
+ + ++ + S A SA + +G
Sbjct: 132 FGRWGWAGTAISFGGVALIAVASDGGFKLDPNAVLILGAALCSAIASVLQKPLLGRLPAL 191
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +L I ++ + + + + ++ +KR
Sbjct: 192 AVTAWILLIGSVPLFPAVPATVQALAAAPAEVNWGVAYLVIFPTAIGYLTWAIALKRLTA 251
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y P + + L + + + ++ ++V +
Sbjct: 252 ARASNFLYGVPPVATLIGFLWLGETPTALGAAGGVMAILGVLVVNVMRKR 301
>gi|167566903|ref|ZP_02359819.1| RarD protein [Burkholderia oklahomensis EO147]
Length = 297
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 106/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTAASEYPQAGRGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIVWTAPGAIAIVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL N + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLARAFANRRLALSLAASAALLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSGLQWLALGCAASGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L G + + L G G +++ +
Sbjct: 181 ADSLAVFSVE---MLVLLPVAAATLAMDGTSVAGRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +VF+L++ + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVFVLRETLSWQQLATYAPIWAAVALTAWHGFLLARR 297
>gi|16272622|ref|NP_438840.1| RarD [Haemophilus influenzae Rd KW20]
gi|2833492|sp|Q57389|Y680_HAEIN RecName: Full=Uncharacterized transporter HI_0680
gi|1573680|gb|AAC22339.1| rarD protein, putative [Haemophilus influenzae Rd KW20]
Length = 298
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 60/295 (20%), Positives = 126/295 (42%), Gaps = 8/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A L+G ++ L+ +S ++ +R++++ P V ++ F + L
Sbjct: 3 KGILVSLLASFLFGYMYYFSTLLKPLSGTDIFGYRMIFTFPFVLLSVTLFKQKAALIERL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K K P + ++ F++A SF Y + P++ V G VF KE
Sbjct: 63 KRIQKRPHLALSYLLCGLLMGFQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRVFFKE 122
Query: 142 RLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R++ + IA ++ L ++ + L G+ ++ I + ++AY RK + F +EM
Sbjct: 123 RISTFKFIAVIIATLGVISNIVLKGGLSWEAIVICLGYTAYFSIRKALKNTDLASFCLEM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++++ + N L+ GL++ + ++ +G
Sbjct: 183 LSLMPVSIYFA---LQTDFATVQQTNPFIWGXLVLLGLISGTALIAYVIASNMLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ Y ++M+ S I + ID+ +F +VIAM++ ++ V + + K
Sbjct: 240 LLGYVETIMMLCVSFLI-GEQIDSESYPLFICLVIAMILVMVDGVYKHTQKEVYK 293
>gi|84514444|ref|ZP_01001808.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
gi|84511495|gb|EAQ07948.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
Length = 328
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 79/293 (26%), Gaps = 14/293 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL------EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + A T + + L + L+V R L++ +
Sbjct: 41 NPPLAIALILTATAFIAGTMILAKLLGTGVLGAPLHPLQVSHGRFLFAFLTLCALAAVLR 100
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + A+ + F+ PV + L
Sbjct: 101 PHIRQPDLR--------LHIGRTAFGWGGVTLMFAAVAFMPLSDATAISFLNPVFGMLLA 152
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L E++ + +AA ++ L++ + +A + I +
Sbjct: 153 IPLLGEKVGPWRWVAAATALIGALVLLRPGPETFQIAGLLALGAAVLMGIELIFIKKLAN 212
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L + + + + + L G G+L + F + RA
Sbjct: 213 REPPFQILLVNNAIGLCIATLAVLPVWTMPTAGQWAALAGIGVLMASAQTCFVNAMARAD 272
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S V Y + V I D + + I++ + L N
Sbjct: 273 ASFVTPFSYLTLVFAAVYDGVIFGVVPDRISVLGAVIILSGATLLALRERKNK 325
>gi|228989714|ref|ZP_04149696.1| Transporter, drug/metabolite exporter [Bacillus pseudomycoides DSM
12442]
gi|228770048|gb|EEM18630.1| Transporter, drug/metabolite exporter [Bacillus pseudomycoides DSM
12442]
Length = 310
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 106/298 (35%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L Q VS ++ + R+L + + ++
Sbjct: 3 MNNNRRLGLIMIITGATLWGVSGPMIQWLFQHTKVSSIDFLVIRLLLAGVFILCFLLTKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + +++FS + FI + + F+ PV+
Sbjct: 63 QN--IFRIWQHPRHLLQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+V K+ + +Q++A + + + + L + A+ ++ Y
Sbjct: 121 AVQHKKLPSIMQVLAIVSALTGTYFIITNGSAQNIVLSKEAILFGVLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L ++ F + + LI + + F +
Sbjct: 181 SLIKQWGTTLIIGWGMLIGGLALFICNRSFEWKQLSQTFTLQTFSMLILIIVSGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ LK+ + + +VIA++ +P
Sbjct: 241 YIGSLKYLSATETSILSSIEPLVAAIVSITWLKESFGAYQLLGGVCIVIAVIFLTMPA 298
>gi|225076951|ref|ZP_03720150.1| hypothetical protein NEIFLAOT_02003 [Neisseria flavescens
NRL30031/H210]
gi|224951704|gb|EEG32913.1| hypothetical protein NEIFLAOT_02003 [Neisseria flavescens
NRL30031/H210]
Length = 300
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/292 (16%), Positives = 111/292 (38%), Gaps = 4/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SLL 81
G L + +L+ + LY +++ + E+ + R++ L + + +G
Sbjct: 6 KGLLASITSNVLFAMLFLYGVWMQPMGGTEIFAWRMVAMLSALCVLMTMVNGWQAAARFA 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ K ++V I A F++ + +G + YF+ P+ + G ++ KE
Sbjct: 66 SNIGRDWKRWLLIVLPTPIFASQLWLFVWGPVNGEGVNVAMGYFLFPLAMMLGGRIWFKE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RLN LQ +A L + + SG + V + + +G +
Sbjct: 126 RLNRLQTVAVALACAGVACELVRSG-AFSWTTVWVFGTYPFYYLLRRKLGVPSLIGLTFD 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ I + F++ G ++ + + ++ G+
Sbjct: 185 LMMITPFALAYILLATDTPAMIAAKPVLIFFIVLLGFNSAISMHLNLKANQLLPVAVFGM 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ Y P+L+ + S+ L +P+ I +G++ + V + ++ K K
Sbjct: 245 LSYLEPVLLFIVSIVWLGEPVQKGALIGYGLIWSGLCVMIANGLLGMKKEKK 296
>gi|119897977|ref|YP_933190.1| hypothetical protein azo1686 [Azoarcus sp. BH72]
gi|119670390|emb|CAL94303.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 301
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 77/293 (26%), Gaps = 17/293 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + W + + + V + + R +L V +
Sbjct: 13 YVLLTLTALFWAGNMVMGRGIRADVPPIALAFWRWTIALALVLPFALPHLRSQWPALRQA 72
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P ++ AL + P+ ++ L V L +RL+
Sbjct: 73 WRPVLALGVLGVGCYNTFA----YLALQHTTATNATLLNSFIPIATIALAFVLLGKRLSS 128
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L+ L+ + ++ + H G + A+ +
Sbjct: 129 LEAAGVLVSLAGVVTIVSHGSLDTLLGLSLNTGDLWMLGAVLTWGIYTVGLQWRPQGVDP 188
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
V+ + L + SGG H L + ++ G+
Sbjct: 189 MLMLAAFTVVGLAMLVPLYAWELSGGRHINPSVAGIGGILYTGIFPGFLGYIFYNAGVAA 248
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S + + P+ + + L + + G+V +V+
Sbjct: 249 VGPSRSSLFIHLMPVFGTLLAALFLGERPYWYHFVGIGLVFAGIVLTTRKAAR 301
>gi|14521649|ref|NP_127125.1| hypothetical protein PAB2381 [Pyrococcus abyssi GE5]
gi|5458868|emb|CAB50355.1| Membrane protein, putative [Pyrococcus abyssi GE5]
Length = 280
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 86/279 (30%), Gaps = 12/279 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T L + +WG T + +E + ++ R L + + +
Sbjct: 3 ETRKAELILILISAIWGSTFPVMKLGIEDYPPITFVAFRFLIASLLMLIFL--------- 53
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L + + F + L ++F + V + F+ + LK
Sbjct: 54 --RKDIKTSQALPGLLVGLSLFLGFSFQVVGLKYTTSSNSAFITSLYMVFTPFVAILLLK 111
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R+ + +A L +L +++ + + ++ F + + G +
Sbjct: 112 TRVKLIDWVALGLALLGTYLISNVGNFNYGDMLTVLAALSFAFQIVLVEYFGNLGIGLAF 171
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ ++F + + G + + + F + +
Sbjct: 172 WQVFWNSMFSLAYAAIFEGLPMPREGSTLFAIIYTAIMATAIAFAVQVKYQPKIDSHRAA 231
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ P+ S IL + + I +++IA+ +
Sbjct: 232 IIYSAEPVFGHFFSFLILGEVLSWKGYIGALLILIAVWL 270
>gi|86356939|ref|YP_468831.1| putative permease protein [Rhizobium etli CFN 42]
gi|86281041|gb|ABC90104.1| putative permease protein [Rhizobium etli CFN 42]
Length = 312
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 101/310 (32%), Gaps = 15/310 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
+ M G + +++ + + + +V R ++L + + Y
Sbjct: 1 MHSVLRNPMRGIALKVSSVVVFLAMQTFIKLAGPDIPPGQVTFCRSFFALFPIMAYLAYI 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + TI + F Y LL + P+++V
Sbjct: 61 GQLSAAF-----HTANPVGHLKRGTIGILSMAFGFYGLLHLPLPEAIALGYALPLVAVVF 115
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFAR 185
+VFL E + + A L+ I+ + I++ L + V SA
Sbjct: 116 AAVFLGETVRIYRWSAVLVGIVGVAIVSWPKLTLLRDGGMEAEQALGALCVLLSAVLGGM 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I V ++ +L V++ S + + P L+L+ G
Sbjct: 176 AMIQVRRLVEEEKTATIVLYFSLTASVFSLASLPFGWLVLPWPSALYLVAAGFCGGVAQI 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A +ST+ EYT+ LL + F+ I I+V A + +
Sbjct: 236 LLTESYRHADVSTIAPFEYTSILLGGIVGYFVFGDVPTVTMLIGTVIIVAAGIFIIYREH 295
Query: 306 INSGKNKTKK 315
+ + +
Sbjct: 296 QLGIEQREAR 305
>gi|319779950|ref|YP_004139426.1| hypothetical protein Mesci_0203 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165838|gb|ADV09376.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 296
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 7/281 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L AY + + + L +++ E+ L++ +FF
Sbjct: 4 GILLALIAYASYSGSDAVVKSLGGQLTIFEIGFFITLFAGFFLFFT-----RPAGERWRD 58
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + A +YA T + F+ P+ L +V LKE++
Sbjct: 59 FWRTRRPWAVQARAWAGIASGVLSVYAFTTIPLAESYALIFLAPLCVTILSTVILKEKVG 118
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +A + ++++ L +A A+ A I + S +L
Sbjct: 119 PWRWLAVVAGFAGVMLVVRPGFRELNLGHLAAFGVAFLAATSVILMRSLAQQEKRTTMLG 178
Query: 205 IPALFYVVWNGF-SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + +++NG + F + + L+L+ G + + +K A + V
Sbjct: 179 VLVGYGLLFNGIGAAATSFTVPDGKQLLWLVAAGAFTAGGQFLQLLAMKYAPANRVAPTH 238
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
Y+ ++ ++ D + + +V A ++ ++
Sbjct: 239 YSQIAWAVILGALFFQEYPDGLSLVGLAVVGGAGLLTMVRE 279
>gi|295677975|ref|YP_003606499.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1002]
gi|295437818|gb|ADG16988.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1002]
Length = 309
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/302 (9%), Positives = 78/302 (25%), Gaps = 9/302 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + + + A ++WG + + L+ + R L V IV
Sbjct: 5 TRQHLRANVLMLIAAMIWGSAFVAQRLSLDSIGPFLFTGLRFLLGALVVLTMIVCVRRPA 64
Query: 79 SL---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + +G +LAV L + F + VI LG
Sbjct: 65 LAELTKRAPGGARELLGAGGLLGVVLAVSISLQQIGLQYTKIANAGFISSLYVVIVPLLG 124
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL----LSLAIAVTWSAYCFARKTIPVG 191
+F + A+L + + +++ + +
Sbjct: 125 VLFRHRT-GLGTWLGAVLAAVGMYFLSVDEHFSMLSGDWYQLAGALVISAQMMLVGRFAA 183
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + L + + G L + I
Sbjct: 184 RHDTLMLALVQFVTCGLVCLSIGLVVEPVSAAVLARAAPTIAYGGALSVGVAYTIQVVAQ 243
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ A S ++ + + +L + + +++ ++V + +
Sbjct: 244 RYAAPSHAAVIFSMEGVFAAFAGWLVLDETLTARALFGCALMLAGLIVCQIVPGWKRARQ 303
Query: 312 KT 313
+
Sbjct: 304 RA 305
>gi|225567843|ref|ZP_03776868.1| hypothetical protein CLOHYLEM_03916 [Clostridium hylemonae DSM
15053]
gi|225163321|gb|EEG75940.1| hypothetical protein CLOHYLEM_03916 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 66/289 (22%), Gaps = 10/289 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL----LK 82
+ +WG + ++ + R + I
Sbjct: 7 FMLILTAFIWGTAFVAQSVGMDYLGPFTFNGVRSFIGGAALLPCIFLLERFNEKNSSAAP 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + +L + F VI LG K+
Sbjct: 67 VKGSRKELIAGGTLCGLLLFAASSLQQLGIQYTTAGKAGFITAFYIVIVPVLGIFLRKKT 126
Query: 143 LNHLQIIAALLIILSLLIM----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
A L+ + L + T G + L + EG +
Sbjct: 127 -GIKVWTAVLIALTGLYFLCITETFTIGKGDVLLFFGALIFSVHILVIDYYSPRVEGVKM 185
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +V L L + + G K +
Sbjct: 186 ACIQFFVCGAASLVPMFALETPKAADMAEGWLPLLYAGVLSCGVAYTLQIIGQKNVNPAI 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ +++ IL + + ++ ++ A+V+ LP
Sbjct: 246 ASLILSLESCFSVLAGWIILGETLSVRESVGCVLMFAAIVLAQLPDKKK 294
>gi|167573968|ref|ZP_02366842.1| RarD protein [Burkholderia oklahomensis C6786]
Length = 297
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 106/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTAASEYPQAGRGIALSVVASALFALLSAYAKLLAPLTGLDIFAWRIVWTAPGAIAVVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL N + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLARAFANRRLALSLAASAALLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSGLQWLALGCAASGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L G + + L G G +++ +
Sbjct: 181 ADSLAVFSVE---MLVLLPVAAATLAMDGTSVAGRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +VF+L++ + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVFVLRETLSWQQLATYAPIWAAVALTAWHGFLLARR 297
>gi|197118681|ref|YP_002139108.1| membrane protein [Geobacter bemidjiensis Bem]
gi|197088041|gb|ACH39312.1| membrane protein, putative [Geobacter bemidjiensis Bem]
Length = 298
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 89/291 (30%), Gaps = 2/291 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P G + + + + + F ++ V++ R L + +F + L
Sbjct: 2 SPKHYGAWLIAASAAGFATLGILIKSAFSGGANITTVLAGRFLVASFFLFIYLRVRKTPL 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +GM+ + + L ++ VT + + F
Sbjct: 62 VIGRKSSLQLLLMGMIGYGGMSMLYANAIHYLPASLTGMLLYTYPALVTVIALIVGEERF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ L + +A L++L +L A + + +
Sbjct: 122 NAAKGVALVVCSAGLVLLLGASFDGARLEGVLCTLGAAGIYSCYIIIGNRILKDIDPLVT 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V A ++ + +GG L + L F G++ +
Sbjct: 182 SLWVCASAGFTFLFYGVATGGLTLDLAPVGWLSILGIALFPTLIAVVGFFAGLRYVGATN 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ PL+ ++ S +L + I ++ +++ ++ L
Sbjct: 242 ASIISMLEPLITVLLSALLLGERITALQGFGGAVLLFGGLILQLWGNEARR 292
>gi|70732695|ref|YP_262458.1| hypothetical protein PFL_5390 [Pseudomonas fluorescens Pf-5]
gi|68346994|gb|AAY94600.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
Length = 292
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 76/283 (26%), Gaps = 5/283 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + A L+ +++L + ++ + ++ L
Sbjct: 15 KGILLIVLATFLFASHDALSKYLSGFFPVIMVVW-----ARYLIHTLLMAGIFLPQSGLR 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ K + + A L F ALL + F+ PV+ L L E++
Sbjct: 70 VLRSKRPLLQLARALCLLSTSLLFTSALLFIPLAEATAVNFLAPVLVTALSVPLLGEQVT 129
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q +A + + +LI+ G + SA F +
Sbjct: 130 RGQWLAVICGFIGVLIIVHPGGELFTPAVLLPFCSALFFCFYQLLTRKLAEHDSPTTSNF 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L + + L ++ G + + A + + Y
Sbjct: 190 FAGLCNTLVMSALVPFFWQTPGFLHGLLMLALGACGMSAHLFLTQAFRHAAPALLAPFGY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + + + ++ ++ +
Sbjct: 250 CQIVFAGLLGWLLFGHAPSLITQVGIAVICLSGLAAAWQQRHR 292
>gi|307822572|ref|ZP_07652803.1| protein of unknown function DUF6 transmembrane [Methylobacter
tundripaludum SV96]
gi|307736176|gb|EFO07022.1| protein of unknown function DUF6 transmembrane [Methylobacter
tundripaludum SV96]
Length = 313
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 96/301 (31%), Gaps = 16/301 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS----VLEVISHRVLWSLPGVFFAIV 72
+ ++G LFV + + + S V+ ++ R+ SLP +
Sbjct: 9 PPNNRQAIIGCLFVLLGAFGFSAKAVLIKLAYDYSHQLDVITLMVLRMAISLPFFLVVAL 68
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATIL--AVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + +D + + +++F IL + L L F+ P
Sbjct: 69 WPVNNSTKAEDAQRLNRQDWLMIFGLGILGYYIASYLDFAGLQYISAGLERLILFLYPTF 128
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSA 180
V + + +N Q +A L ++++ + + + S + A+ ++
Sbjct: 129 VVLFTAAIQRRAINRHQALALALSYAGMILVFVDNRAAMASSGLLLGSALVLASAIAFAF 188
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + F + + + G + L L LI
Sbjct: 189 FLMGSGMMVKRIGSTRFTAYSMTVACLATGLHFVIQHGVKLLNLPANVYWLALIMAIFST 248
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + GI R + I+ P+ + + +L + + + +V+I + V
Sbjct: 249 VLPAFLMNAGISRIGAGSASIISSIGPIGTLALAFLLLNETLTAAQLAGTALVLIGVYVV 308
Query: 301 L 301
Sbjct: 309 S 309
>gi|228984901|ref|ZP_04145071.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774851|gb|EEM23247.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 321
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 95/297 (31%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 4 NRLKGIIMVVIGACLWGLSGTAAQQLFQSEHVSTEWLVTIRLLISGVILLIISSFGTNKK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 64 EIFGIWKRRSNAYKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 124 WNVRPSKIDFISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKGLL 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + E L + + +F
Sbjct: 184 ERWSSSVIVGWGMIIGGIGVTIVQFITTNEFILLSTMKYVKLSTLPLITFVVIFGTLIAF 243
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V+I +++
Sbjct: 244 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIIMVLILS 300
>gi|163759698|ref|ZP_02166783.1| hypothetical protein HPDFL43_10102 [Hoeflea phototrophica DFL-43]
gi|162283295|gb|EDQ33581.1| hypothetical protein HPDFL43_10102 [Hoeflea phototrophica DFL-43]
Length = 300
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 89/299 (29%), Gaps = 9/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G LF+ + + + + L ++SV +V+ R + ++
Sbjct: 2 TPNIRGALFMALSMAGFTLNDSIVKLLTNEMSVAQVMFLRGTIATVLIYLLARQKRALRP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L K TI + L S P+ ++FL
Sbjct: 62 LRLLKDKWVALRVFGEVGGTITFL------IGLAQVPIANASAILQALPLAVTMGAAMFL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A L+ +LI+ ++ + + A + I +
Sbjct: 116 SEPVGWRRWLAILIGFAGVLIIIRPGFEGFSPYSLMILGTVLLAATRDIATRKIDATIPS 175
Query: 200 MCV--LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + A+ + N + L + ++ ++S
Sbjct: 176 LLISTVTSAAVALAGLVLIVPMGGWAPVNATQMSMIAVAACLLLVGYQFIIMAMREGEIS 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ YT L ++ + + D + IV+ + + L + S ++
Sbjct: 236 FIAPFRYTGLLWAVLMGYLLFGEIPDIFMIVGGTIVIGSGLFTLYRERVRSKAKPASRA 294
>gi|56710250|dbj|BAD80972.1| putative permeases of the drug/metabolite transporter superfamily
[uncultured bacterium]
Length = 336
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 81/289 (28%), Gaps = 13/289 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ G +F A L + ++ L + + V + + + + +
Sbjct: 35 SSSMQSTFSKGVIFALSAAALNATIGVLSKVLMSDGFTASSVAVIKTVLGCVLLSILLFF 94
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ I + + + S+
Sbjct: 95 LKR------PAASTKWTQAAICAFLGIFVLFHFETSAYRHYAAAGVVVVLMASASISSII 148
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK-----TI 188
LG +FLK+ + + A L I + ++ +L A S
Sbjct: 149 LGRIFLKDAITANATVGAALAIAGISVIFGGDLQQGFTLQGAALASMAGCGYGAFSVAMK 208
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+G S G +L +L+ ++ G L + L L F +
Sbjct: 209 RMGVSGGLHFTRQLLFFGSLYLLMPAAADGFAMGELSPLAIAALLALATLPTILGFFCTT 268
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
I+ K S V +E T PL + + L + ++++ +
Sbjct: 269 KAIEYLKPSQVQALELTEPLFAALLAFVALNEVPRESLYAGAALIIVGL 317
>gi|307297605|ref|ZP_07577411.1| protein of unknown function DUF6 transmembrane [Thermotogales
bacterium mesG1.Ag.4.2]
gi|306916865|gb|EFN47247.1| protein of unknown function DUF6 transmembrane [Thermotogales
bacterium mesG1.Ag.4.2]
Length = 301
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 84/287 (29%), Gaps = 1/287 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + + ++WG + ++T+ + + + + R ++ +F + G +
Sbjct: 6 RRSLGLVILATTAVIWGGSYIFTKVAVSSLPPMLLAFLRFAIAVVILFPISLNKRGSFNT 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + F A + + + +F
Sbjct: 66 VDHKNAALAGLSGITFYFFFENYGLTMTNAADASLIVSTAPILTILLYDLIRKKYDLFEY 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+++I L S AV+W+AY + + I S M
Sbjct: 126 LGGLVAFSGLSVIIYSGRFADGSSVTGNLFSFGAAVSWTAYTYFYEKIHNSSIWTTLEIM 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + + + L ++ + +++ GI
Sbjct: 186 LWGLLFSAPFALSEILLFKRPVVFSFGAVSGILFLGIFASALGYIMWNKGIDLWGGKAAT 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ YT P+ +++ + L + +V M++ +
Sbjct: 246 LWVYTIPVFTVIADIVFLGNSPSMLFFTGSALVGAGMLLVIGREYRR 292
>gi|262373063|ref|ZP_06066342.1| chloramphenicol-sensitive protein [Acinetobacter junii SH205]
gi|262313088|gb|EEY94173.1| chloramphenicol-sensitive protein [Acinetobacter junii SH205]
Length = 315
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 58/295 (19%), Positives = 120/295 (40%), Gaps = 5/295 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A + +G+ YTQFL + + R++ +LP + + S+
Sbjct: 3 KGIAYSILASVTFGVLYFYTQFLGALDSEQTFGWRIIATLPFLTLFMWMSGDLVHIKSIF 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L P + +L+ ++ + + F++ + +G S YF+ P++ V GSV E
Sbjct: 63 HRILAKPSLILLLIITSILTSAQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+L+ Q +A LL + + G A A F + + G F
Sbjct: 123 KLSKFQWVAVLLAVFGVGHEVWRLGSIAWETAFVAIGYAAYFILRKQIHTDNLGGFWWDL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L +P + G + FL +IG GLL++ + + L G+
Sbjct: 183 LLILPIAILLTHTGAT-PYVKFLEFPSLFFVVIGLGLLSAIGLGSYILASRYLPLIIFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y P+L+ + +L + I + + + +A++V +L ++ + K +++
Sbjct: 242 LGYLEPVLLALV-SLLLGEKIGAEEWLTYIPIWLAVLVLILEGTLHLLEQKRRQN 295
>gi|228909182|ref|ZP_04073010.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis IBL
200]
gi|228850503|gb|EEM95329.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis IBL
200]
Length = 294
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 97/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + + A +WG + +++ L+ + L ++ R + + ++F +
Sbjct: 2 KQNILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYFILKIA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQAASIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 293
>gi|229172456|ref|ZP_04300015.1| Transporter, drug/metabolite exporter [Bacillus cereus MM3]
gi|228610927|gb|EEK68190.1| Transporter, drug/metabolite exporter [Bacillus cereus MM3]
Length = 321
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 96/297 (32%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 4 NRLKGIIMVVIGACLWGLSGTAAQQLFQYENVSTEWLVTIRLLISGVILLLISSFGTRKK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 64 EIFGIWKQKSDATKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 124 WNVRPSKIDFISITLSLVGTFLLLTNGSVHNLAVPTPAIIWGILSGLSLAFYSLYSKGLL 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + S E L + + +F
Sbjct: 184 ERWSSSVIVGWGMIIGGIGVTILHFISTKEFILLSTMKYVKLSTLPLITFVVIFGTLIAF 243
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 244 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILS 300
>gi|85704301|ref|ZP_01035404.1| membrane protein, putative [Roseovarius sp. 217]
gi|85671621|gb|EAQ26479.1| membrane protein, putative [Roseovarius sp. 217]
Length = 306
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 96/302 (31%), Gaps = 8/302 (2%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVF 68
++ S ++ G ++ IL+ G+T L +V + R L +
Sbjct: 2 SAQQASTAESTAQPGWGIFWMVVTGILFVGVTALVKVLGTRVPAPQAAFLRYAMGLVFLI 61
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
+ L + G + V + YA+ + ++ P
Sbjct: 62 PML-------GSLWRLRLDRGTWGFFAARGMVHTVGVALWFYAMARIPIADVTAMNYLAP 114
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ +FL ERL +I+A + ++ LI+ + +A+ ++A F +
Sbjct: 115 IYVTLGAGLFLGERLALRRILAVGVALIGALIILRPGFREVGPGHLAMIFTAIFFGASYL 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G V+A+ ++ + + + L L + +
Sbjct: 175 IAKVVSGRSSPGVVVAMLSITVTIGLAPVAAAVWVTPTPWELAILFAVATLATAGHYTMT 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ A L+ + + + ++ + + +D + ++V A+ +
Sbjct: 235 LAFRAAPLAVTQPVTFLQLVWAVLLGALVFGEGVDVFVVLGGMVIVGAVSFISWREAVLK 294
Query: 309 GK 310
+
Sbjct: 295 RR 296
>gi|241258613|ref|YP_002978497.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240863083|gb|ACS60746.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 301
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 80/290 (27%), Gaps = 14/290 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++ + + W + + L ++ +E+ + R + + +V +
Sbjct: 19 LVAFAAIVVTILSWASSFAVIRICLGPLTPIELATARYVAAGAIALVYLVIYRPMPE--- 75
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ V + +A + T SF PV + + + L ER
Sbjct: 76 ----KRDFFRLSVAAVLFIAAYAVLLNTGEQTVAAGPASFIINTMPVFTALIATFALGER 131
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
+ + ++ + S A SA + +G
Sbjct: 132 FGRWGWAGTAVSFGGVALIAVASDGGFKLDPNAVLILGAALCSAIASVLQKPLLGRLPAL 191
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +L I ++ + + + + ++ +KR
Sbjct: 192 AVTAWILLIGSVPLFPAVPATIQALAAAPAEVNWGVAYLVIFPTAIGYLTWAIALKRLTA 251
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y P + + L + + + + ++ ++V +
Sbjct: 252 ARASNFLYGVPPVATLIGFVWLGETPTALGAVGGVMAILGVLVVNVMRKR 301
>gi|170748214|ref|YP_001754474.1| hypothetical protein Mrad2831_1796 [Methylobacterium radiotolerans
JCM 2831]
gi|170654736|gb|ACB23791.1| protein of unknown function DUF6 transmembrane [Methylobacterium
radiotolerans JCM 2831]
Length = 317
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 84/302 (27%), Gaps = 10/302 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY 73
E A ++G + A + + L V L R S+ + I
Sbjct: 22 AELAGRRRIVGIALMCGAVAFFASLDACGKTLARAGVDPLVTTFMRYAASVAMISLFI-- 79
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + + + + +L AL Q T F P+
Sbjct: 80 ----NPVRTPGVVKSRRLPLQIARSLLLFASTALNFLALRYLQLAETISIQFAAPLTVAL 135
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L L E + ++ A + L +L++ + A+ + +A I
Sbjct: 136 LAGPLLGEWSSRARLTAIGVGFLGVLVIVRPGVGGMHPAALLCVANVVVYAFYAIITRKL 195
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + L + + ++ L G L + +
Sbjct: 196 AAYDSTATTMFYTGLAGLALMAPLLPWIWTSPASLTHWALLFGVALFGTLGHWLLVMAHA 255
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
RA + + YT L + + ++V+ +YLL + +
Sbjct: 256 RAPANVLAPFIYTQLLWSVTLGFLLFGDVPSRWTVAG-AMIVVGSGLYLLAQETIRREAR 314
Query: 313 TK 314
Sbjct: 315 PA 316
>gi|169794551|ref|YP_001712344.1| hypothetical protein ABAYE0363 [Acinetobacter baumannii AYE]
gi|213158877|ref|YP_002320875.1| hypothetical protein AB57_3576 [Acinetobacter baumannii AB0057]
gi|301348145|ref|ZP_07228886.1| hypothetical protein AbauAB0_17906 [Acinetobacter baumannii AB056]
gi|301596541|ref|ZP_07241549.1| hypothetical protein AbauAB059_12022 [Acinetobacter baumannii
AB059]
gi|332856638|ref|ZP_08436247.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332868668|ref|ZP_08438315.1| putative membrane protein [Acinetobacter baumannii 6013113]
gi|169147478|emb|CAM85339.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
gi|213058037|gb|ACJ42939.1| hypothetical protein AB57_3576 [Acinetobacter baumannii AB0057]
gi|332727031|gb|EGJ58521.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332733240|gb|EGJ64435.1| putative membrane protein [Acinetobacter baumannii 6013113]
Length = 300
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 88/290 (30%), Gaps = 1/290 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + +F +
Sbjct: 69 PLNWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEQI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 NFKQWLCILLGLCGAVLVVSGDHGFGVPSPYSLLIVLAAIAWGLYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ + + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTIPLLFYSTHLPHEILHATWQANMSVVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRT 298
>gi|42519813|ref|NP_965743.1| hypothetical protein LJ0512 [Lactobacillus johnsonii NCC 533]
gi|41584103|gb|AAS09709.1| hypothetical protein LJ_0512 [Lactobacillus johnsonii NCC 533]
Length = 300
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 90/301 (29%), Gaps = 12/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVS----VLEVISHRVLWSLPGVFFAIVYFSG 76
+ T A + WGI+ L+ + L +S + + R++ S +
Sbjct: 2 TKKRLWTCLAALACVFWGISGLFAKGLFNISSSIRPIWISQVRMVVSGVLLLIFAQITGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LK A+ ++ + L + + + + F+ P +F
Sbjct: 62 --RPLKTMTDKKDAITVIAYGLLGLLPVQYCYFIVVQEANASIATVLQFIGPFFVLFYMV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPV 190
VF + L + +IAA++ + + + H P + ++
Sbjct: 120 VFEHQVLRAIDVIAAVVAFIGVFFLATHGHFNQLSLTPSVLFWGLISAVGVATNTLIPRR 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + L + F
Sbjct: 180 LLDHTSSLVVTGWGLLFSGIALVIAHPVWPKVPNNINIFWLMAGVIVIGTLIPFQWMMGS 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ K ST +++ P+ + SV I + + I +++ A++ ++ K
Sbjct: 240 LRYIKPSTASLLDAFEPVSATIGSVIIFGLVMAPIDWIGSIMIICAVLALNWEPKSHNKK 299
Query: 311 N 311
Sbjct: 300 E 300
>gi|13476493|ref|NP_108063.1| hypothetical protein mll7827 [Mesorhizobium loti MAFF303099]
gi|14027254|dbj|BAB54208.1| mll7827 [Mesorhizobium loti MAFF303099]
Length = 302
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/302 (11%), Positives = 91/302 (30%), Gaps = 7/302 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + +G + V + ++G+T + T+ + L + R + +++
Sbjct: 6 AAKPEATERTLGIILVSSSAAVFGLTGVLTKSI-HADPLTITCWRGFVGSILISLYVLW- 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A A+ FI A + Y +P I+ L
Sbjct: 64 ---RHHRSGNRGTLRLGWRGWLLAVEGALASIAFISAFKFTYVANVAVIYATSPFIAALL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
V ++E ++AA + + + IM + + + + +
Sbjct: 121 AWVLVREPFRLQTMLAAAVSMCGVGIMVWSGFGTGHLFGDGLALLMTAGSALYMIMVRAF 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ A + F L G S + ++ G +
Sbjct: 181 RDTPVVWAGAVSAFLLFILGWFITDPLAVSARDAVLLVTFGASFALSSIL--WTEGARLI 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G++ I+ + L + + IV+ A+ V+ + + ++
Sbjct: 239 PAPESGLLGSAEVPFAILFAFLFLAEIPPVASMVGGAIVLCAVFVHAGRDWLAARSHQAA 298
Query: 315 KS 316
+
Sbjct: 299 SN 300
>gi|86140081|ref|ZP_01058644.1| possible transporter, DME family, DMT superfamily protein
[Roseobacter sp. MED193]
gi|85823176|gb|EAQ43388.1| possible transporter, DME family, DMT superfamily protein
[Roseobacter sp. MED193]
Length = 312
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 96/310 (30%), Gaps = 13/310 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ + S+ G L A + G L Q+ L + RV +LP +F +
Sbjct: 1 MTQPSPSVDLTSGVLLAALALVWGGSFFFAEVALSQLPPLTITLFRVGLALPVLFLVVRI 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ +G L + + WG + + F +V
Sbjct: 61 KGIQIPGGARIWGAYLGMGALNNALPFSLIFWGQTQIESGLASILNGTTAMFG----AVM 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFA 184
G + E L ++I A L L + ++ S L LA A +++
Sbjct: 117 AGILLRDEPLTSQKLIGAALGFLGVAVIMGPSTLTSFDPRNLAQLAVLAAAFSYALASVW 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
K G V+ L + G L + L + +
Sbjct: 177 GKLFLAGQPPLMNALGMVVGSTVLMLPLVFYVEGMPRLDLSAEVWCALIGIAVLSTALAY 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ ++RA + + ++ P + + L + + + F ++ + +VV
Sbjct: 237 LMYFDILRRAGSANLMLVTLLIPPVAVGLGAGFLGETLSREAFLGFLVIGLGLVVTDGRL 296
Query: 305 VINSGKNKTK 314
+ +
Sbjct: 297 FKVIANRRHR 306
>gi|156976694|ref|YP_001447600.1| hypothetical protein VIBHAR_05469 [Vibrio harveyi ATCC BAA-1116]
gi|156528288|gb|ABU73373.1| hypothetical protein VIBHAR_05469 [Vibrio harveyi ATCC BAA-1116]
Length = 292
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/296 (9%), Positives = 86/296 (29%), Gaps = 12/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++ + ++++ ++ + I R + + +
Sbjct: 3 NSERKAAFVLVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCI------- 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ +F ++ + + V
Sbjct: 56 KPLRAANKKDIFAAAGVGVLLGGALMCWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMF 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL----SLAIAVTWSAYCFARKTIPVGSSEG 195
++R + I+ + IL L ++L G A A F +
Sbjct: 116 RQRPQRIFWISLPIAILGLGCLSLAGGWQQSTSQLWFLGAALMLALHFNVNSKYSQKLPV 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L I L ++ + + F + L S + + + G K +
Sbjct: 176 LLLTCIQLFITGLIGLLISSLVETVPEEVSTSIWIWFALSTLLATSLRYVMQTMGQKFVQ 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T ++ P+ ++ SV + + + + +++ ++++Y + K
Sbjct: 236 SGTAALIMILEPVWTVILSVLWYGEVLTANKLVGCALILFSLLIYRTGGKLRFPKR 291
>gi|89070064|ref|ZP_01157395.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
gi|89044401|gb|EAR50539.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
Length = 290
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 88/283 (31%), Gaps = 5/283 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F+ +++ + ++ L + ++ V+ R + V + SG +
Sbjct: 6 RGIAFMVATTLVFALQDGLSRHLGETYNIFMVVMIRYWFFASFVIAIALRQSGSIRRAAA 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
T + VF +L+ + A + + P++ L L E++
Sbjct: 66 TR----QPVVQVFRGLLLSFEICVMVAAFVLLGLIEGHAIFACYPLLIAALSGPVLGEKV 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A + + +L++ A+ SA FA +
Sbjct: 122 GWRRWCAIGVGFVGILVILQPGSGVFTLAALVPFASALMFALYGLLTRYVSARDSAATSF 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
V G + D ++ ++ + + + A+ S V
Sbjct: 182 FYTGTVGAVSMTLIGLWFWEPMVPRDWGWMALLCVMGATGHWLLIKAYEVAEASAVQPFA 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y + + F+ + + T + G+VV A V L+
Sbjct: 242 YLQLVFASLLGFFVFGETLRTNVAVGAGLVVAAGVFTLVRARR 284
>gi|227432469|ref|ZP_03914456.1| DMT superfamily drug/metabolite transporter [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227351790|gb|EEJ42029.1| DMT superfamily drug/metabolite transporter [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 304
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 99/298 (33%), Gaps = 11/298 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G + + L+ I+ + L + ++ ++ R+ S + ++ FSG
Sbjct: 2 KKQGIICGVLSAALFVISGILASILFRNQNINPEWLVGVRMSLSGIILLIVLICFSG-RR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V ++++ + + F ++ + P I V L S+
Sbjct: 61 VFEIWLNKKDVVLIILYGIVGVLLAQSSFFLSVYFGDAATAIILQSLGPTIIVILLSLAT 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ +HL I + L+ + + ++ + I L I + + P+
Sbjct: 121 RTLPSHLDIWSILIALTGVFLLITNGNINQLVVNSKALFWGILFEFGLAAYTLIPKPLLE 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + + + + + + ++ +
Sbjct: 181 KQSPLVVVAWGLLVGGTAENFFHPIWYMPSQVSTKDWIIMVFIIIAGTLLPYALYVMSLS 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + +T ++ P++ + SV +L + + + ++ + + LP K
Sbjct: 241 QLQPTTASLLSTIEPMVATLLSVTLLHVHLRMFQVLGILFIISTIFLISLPLERILKK 298
>gi|289581546|ref|YP_003480012.1| hypothetical protein Nmag_1877 [Natrialba magadii ATCC 43099]
gi|289531099|gb|ADD05450.1| protein of unknown function DUF6 transmembrane [Natrialba magadii
ATCC 43099]
Length = 367
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++WG + L + + + R + + T
Sbjct: 7 ILLFVALALVWGTAFSAIEVGLATIPPILFAALRFDIAALVFVGLVAIRELEWRPRTRTD 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
AV + A + Y + S + VTP +++ L +R+
Sbjct: 67 WYAIAVAGGLLVGGHFAFLFLGQSYVSSAVAAIVLSLTPIVTPPLALAL---LPNQRIRA 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---------KTIPVGSSEGF 196
++ L+ + ++++ + G + +
Sbjct: 124 PAVLGLLVGLAGIVVIAVPGGSLDGQILGVALLFVAATLFALGSVLIEGIDESLPIISLQ 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
M V A V + G L + L + F I+ ++R
Sbjct: 184 AWAMVVGAAVLHALSVAHPAEGLSSASLTLPSASALLYLGVASTAGGFLIYFVLLERVGA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + ++ Y P++ V +L + I + + F ++++ + L +
Sbjct: 244 AELSLVNYATPVVAAVFGWALLGESITALTILGFALIIVGFALCKLDALWQ 294
>gi|15603563|ref|NP_246637.1| hypothetical protein PM1698 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12722107|gb|AAK03782.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 301
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 85/297 (28%), Gaps = 20/297 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A WG L+ + L + + + R + +
Sbjct: 1 MTNKQGYGYFCLLLATFFWGGNYLFGKILSTDIPPIVLNYARWFPAALILLLLF----SK 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
S + ++ S + + F L T S V P+ +FL +
Sbjct: 57 RSCQFTPVIRQHWRILIALSLLGIVIFPVFLYQGLQTTTSLNASIYLAVVPIFVLFLNRL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP------LLSLAIAVTWSAYCFARKTIPVG 191
+ +N + AL + +L + I + + SA ++ +
Sbjct: 117 VFGDPINFTGLTGALFSFVGVLWLLSRGDIQRLTQLEVNQGDLWALGSALSWSIYCCLIR 176
Query: 192 SSE---------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ M +L LF + L ++ +
Sbjct: 177 LKPAQLPNTVLLTTLVCMAMLLFTPLFIWQYQQLPPAFFSTLTPTQYSIITYLIIGPSIL 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++YGI PL + V +L + + I G+++ +++
Sbjct: 237 SYGFWNYGISLVGADKGAAFTNATPLFAALLGVLVLNEALAFYHMISAGLIITGLLL 293
>gi|37677104|ref|NP_937500.1| hypothetical protein VVA1444 [Vibrio vulnificus YJ016]
gi|326424321|ref|NP_762880.2| drug/metabolite transporter superfamily permease [Vibrio vulnificus
CMCP6]
gi|37201649|dbj|BAC97470.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319999707|gb|AAO07870.2| Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus CMCP6]
Length = 298
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 88/284 (30%), Gaps = 2/284 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RVL++ + +Y + L K+ +G
Sbjct: 13 AAIWGSSFLFMRIAAHSFGPAYLIELRVLFAAISLLLVSLYLRKHIRALLSHPKHFFIIG 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + L + T ++ + + T + + + + + L +
Sbjct: 73 LFNTALPFLCFAYAAQTLNASTLAVLNSTAAIWGTVIGFFWHKTPISTKGVIGLMLGVTG 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+++L L + V + G+ + ++ A +V
Sbjct: 133 VVVLVGWDAINLGQQAALPITAGVMAACCYGIATNYTKGAPQVPAFANAHGSMWAAVLIV 192
Query: 213 WNGFSG-GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ +I L + ++ I ++ + + P+ I
Sbjct: 193 LPLLPFVPMNAMPTSIEWLSVFALGILCTGIAYLMYFRLISEIGPASALSVTFLIPVFGI 252
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ IL +PI +V+ ++ ++ ++ + K
Sbjct: 253 LWGYLILNEPIGINTLAGTILVLSGTMMVTGFSLRSALSSPQAK 296
>gi|33596022|ref|NP_883665.1| integral membrane protein [Bordetella parapertussis 12822]
gi|33601410|ref|NP_888970.1| integral membrane protein [Bordetella bronchiseptica RB50]
gi|33573025|emb|CAE36666.1| integral membrane protein [Bordetella parapertussis]
gi|33575846|emb|CAE32924.1| integral membrane protein [Bordetella bronchiseptica RB50]
Length = 308
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 90/294 (30%), Gaps = 15/294 (5%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ I WG + + + VS I R ++ + + ++ L++
Sbjct: 19 MLALCICWGFQQIAIKLVAADVSPTLQIGLRSAFAAVVLIWVVL-----RHEGLGALRDG 73
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
L A + T + F Y ++ L + ERL LQ
Sbjct: 74 TLGPGLAVGALFALEFLLVGVGLEYTTASHMAVFLYTAPIFTALGLHLLLPDERLKPLQW 133
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVGSSEGFFIE 199
+ + + L G + + W A A + + +
Sbjct: 134 LGVAVAFGGIATAFLGKGHAAVPGMLLGDLLGVLAGAAWGATTVAIRKSSLSEAAPAKTL 193
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + L ++ SGG ++ + + + ++R + +
Sbjct: 194 FYQMLMAGLALPAFHFASGGAAPVWSGAALASLGFQSVVVALSSYLAWFWLLRRYLATRL 253
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ + PL + V IL +P+D+ I +V+ + + ++ +
Sbjct: 254 AVLSFMTPLFGVTFGVLILDEPLDSGFVIGAVLVLAGITLVSGAELLREKLRRR 307
>gi|118579983|ref|YP_901233.1| hypothetical protein Ppro_1560 [Pelobacter propionicus DSM 2379]
gi|118502693|gb|ABK99175.1| protein of unknown function DUF6, transmembrane [Pelobacter
propionicus DSM 2379]
Length = 304
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 95/289 (32%), Gaps = 13/289 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F+ LWG + L+++ L ++ L + R ++L + +++ +L + L
Sbjct: 13 YFFLVLTTFLWGGSFLFSKIGLREIPPLLFVFSR--FTLATMIMLVLFARRLPALDRTIL 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + F++ + + + +G + KER+
Sbjct: 71 RRGAI------VGAALGLTNITFVFGVRGTSISRAGVLNNLFVLFIPLIGKLIWKERVGR 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG----FFIEMC 201
+ + L + ++ G + T A A I V + + +
Sbjct: 125 INLAGLALAGAGIWLLATSGGAGFNRGDLISTLCALFIAVHIITVSRVLADDDVYLVSLV 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A AL V + + F + + + + G+
Sbjct: 185 QFATVALMSGVALLSCPAVPAAVSGAALFSVVYCAIFPTVVCFTLQNSFQRYVTPTRAGL 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ +++ +L + + + + ++ +A+++ LL + +
Sbjct: 245 VYTLDPVWSLLAGFLVLGERLLALEWLGCAMIFLAVLIPLLARYLMETR 293
>gi|300312842|ref|YP_003776934.1| chloramphenicol-sensitive protein [Herbaspirillum seropedicae SmR1]
gi|300075627|gb|ADJ65026.1| chloramphenicol-sensitive protein [Herbaspirillum seropedicae SmR1]
Length = 300
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 104/292 (35%), Gaps = 5/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G A L+ + YT+ L + ++ R+L + V I + L
Sbjct: 11 RGVGLSVLASALFALLSGYTRLLAPLDGNDIFGWRILATAVAVLALIAWRGQLSRLRAAC 70
Query: 85 L---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+P +L+ A +L F++ + Q S YF+ P+ V +G + E
Sbjct: 71 AELLGSPGRCLLLLLMAALLGFQQWLFLWGSVNGQALEVSLGYFLLPLSMVLVGRLLYGE 130
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RLN LQ +A LL + + + F + + I
Sbjct: 131 RLNLLQRLAVLLACIGVAHEIWMTRSFSWPTLAVALGYPPYFILRR--RLQLDSLMIFAV 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L I AL ++ L L L G GLL+ + K + G+
Sbjct: 189 ELLILALPALIAVALGDTLATTLRTPAMLLLLPGLGLLSMVALACYLRAGKLLPMGLFGV 248
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ Y P+L+++ ++ +L + + + + + +A+++ + + +
Sbjct: 249 LGYVEPILLVLVAIAVLGESLPLAQLGTYVPIWLAVLLTAMHSAKLMRQTPR 300
>gi|256372411|ref|YP_003110235.1| protein of unknown function DUF6 transmembrane [Acidimicrobium
ferrooxidans DSM 10331]
gi|256008995|gb|ACU54562.1| protein of unknown function DUF6 transmembrane [Acidimicrobium
ferrooxidans DSM 10331]
Length = 315
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 92/288 (31%), Gaps = 16/288 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G + + A +WG + T L Q L V+ R + +
Sbjct: 6 HRQRTLGIIALAGASAIWGGMYVATAALMRQTPPLVVLELREAIAGLILVPIA------W 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + V G + L S +PV+ LG V+
Sbjct: 60 RSGRLRIARGDLALAAAIGIVGFTVSIGLQLEGTHIAGAALGSLITASSPVLIALLGRVW 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARKTIP 189
L+ERL +++A L+ + + ++ I L A+A A T
Sbjct: 120 LRERLPWPKLVAILVAVGGVALIAGHPPGGPQVEPGIIDLAGAALAWAIYTVGSAHLTRR 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ I V ++ +L + + + + + F ++++
Sbjct: 180 YDALGVLAIACIVGSVTSLPFALASASHAAHPLPTTLVAWLEVAYISIAGMALAFFLWNW 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
G R + G M PL+ +V + +L +PI +VV +
Sbjct: 240 GFGRVDAAVGGSMLLFQPLVGVVLGIVLLAEPITLTLVFGGFLVVAGV 287
>gi|75759822|ref|ZP_00739898.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74492680|gb|EAO55820.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 323
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 104/294 (35%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 20 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLTKKQNIF 79
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ +++FS + FI + + F+ PV+ +
Sbjct: 80 QIWKHPR--YSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 137
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + + + + I + L A+ ++ Y ++
Sbjct: 138 RKFPASMQLFAIITALTGTYFIITNGSIENVVLSKEAIIFGLLTAIGFAFYTLHPASLIK 197
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + + F + LI + + F ++
Sbjct: 198 ACGTTIVIGWGMLIGGIALLICNSSFGWSQLSQTFTPKTFSMLILIIISGTLSFLLYIGS 257
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 258 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 311
>gi|310814866|ref|YP_003962830.1| S-adenosylmethionine uptake transporter [Ketogulonicigenium vulgare
Y25]
gi|308753601|gb|ADO41530.1| S-adenosylmethionine uptake transporter [Ketogulonicigenium vulgare
Y25]
Length = 290
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 97/292 (33%), Gaps = 5/292 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ T +G + + +++ I ++ L +V V+ R ++ + +G
Sbjct: 2 STQNTRLGIMLMVMTTMVFSIQDGLSRHLAGEYNVYLVLMIRYVFFAIFALAIVQVSTGS 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + +L V +YA + + P+I L
Sbjct: 62 LKK----GLRTAYPILQPLRGVLLIVETALLVYAFTVLGLIESHAVFTSYPLIVAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ + A + + +LI+ G AI +A FA ++
Sbjct: 118 ILGEKVGWRRWTAIGIGFVGVLIILQPGGHVFSLTAIIPLAAATIFALYSLLTRYVSRKD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+A AL + G ++ D +F++G + + + A+ S
Sbjct: 178 SASTSMAWSALVGAICATAVGVFYWEPMAPSDWVFMLGLCVFGMLSHWMLIKCYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
V + + + +F + ++ I I++ A + LL +
Sbjct: 238 AVQPFAFLQVGFVSLIGLFFFGETLEQRVIIGGSIILAAGLFTLLRERAKAK 289
>gi|158321767|ref|YP_001514274.1| hypothetical protein Clos_2747 [Alkaliphilus oremlandii OhILAs]
gi|158141966|gb|ABW20278.1| protein of unknown function DUF6 transmembrane [Alkaliphilus
oremlandii OhILAs]
Length = 297
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 91/292 (31%), Gaps = 12/292 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + V A +LWG T F Q + + V + R+ +
Sbjct: 1 MKERNLKAQMLVIMAAVLWGTTGSSQAFAPQNATPMAVGALRMAIGGTALLLMAKIRGAF 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ ++ K +L+ ++ +AV+ F + + + + + +
Sbjct: 61 KTKIELDKK------LLLTASLCMAVYQPLFFLGVSKTGIAVGTVLALGSAPVFSGIIEC 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGS 192
E+L+ ++ L I+ ++ +++ I S + + + +
Sbjct: 115 VFGEKLSSRWVLGTALSIVGCGLLFGGQDAMNMNVWGSILSIGAGISYAIYVKVSKKLFE 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ + + F + L + + + +F+Y +
Sbjct: 175 NSPMEPVNGLIFFISAVLLSPILFFQDISWLGTTRGIVTMLHLGIVATAVAYTLFAYALV 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ PL + V + K+ + + I ++ +++ P
Sbjct: 235 SISTPKAVALTLVEPLTAAILGVVVFKERLTGISIIGGVLLFCGLILNSYPE 286
>gi|284048602|ref|YP_003398941.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
gi|283952823|gb|ADB47626.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
Length = 297
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 86/300 (28%), Gaps = 13/300 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
TL ++WG + + L+Q+ L V+ R S + A
Sbjct: 2 SKNWQSTLLCTLVIVIWGSLYISGRLVLQQIPALWVLFIRYALSSVILLAA----GYHTL 57
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + S +TPV+ L + L
Sbjct: 58 QGRIAIARKDWGELFFVGVVGYFLSNAALFLGIQYSSASFASLINSLTPVVISGLAIILL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI--------PVG 191
E++ LQ ++ L+ + I+ + + + + A
Sbjct: 118 GEKVTKLQGLSLLVAVAGAGIIIGRPTQGVTTAGMVICVFALFSWAYATIHLKKLTARYD 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
M + A+ +L + G L + + +++ +
Sbjct: 178 PLLVTGYGMAIAALLSLPSAWVFVRATGAAVSFTGTVWMPLLYTCLVCTALAHLLWNELL 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ + PL +V V +L + + +V AMV+ L ++
Sbjct: 238 QKLPATYCASFYPLQPLTSMVLGVLLLGETMTPSLITGALCIVAAMVLNTLAARRTRNRS 297
>gi|126730432|ref|ZP_01746243.1| hypothetical protein SSE37_11769 [Sagittula stellata E-37]
gi|126709165|gb|EBA08220.1| hypothetical protein SSE37_11769 [Sagittula stellata E-37]
Length = 288
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 5/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T +G L + ++ + ++ L + +V+ V+ R + V GG
Sbjct: 2 TEQNTRLGILLMVATTFVFAMQDGLSRHLATEYNVMMVVMLRYWFFAAFVIAVAARQPGG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + F +L V + A + + + P++ L
Sbjct: 62 LRRAT----RSGHPLVQCFRGALLVVEINVMVLAFVFLGLVESHAVFACYPLLVAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ + +A + + ++++ SG A +A F+ +
Sbjct: 118 VLGEKVGWRRWVAIGVGFVGVIVILQPSGGVFSPYAAIPLLAALMFSLYALLTRYVARTD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
G + PD ++ L + + A+ S
Sbjct: 178 TAATSFFYTGTAGAFVATAIGLWFWEPMTAPDWGWMSLLCLTGALGHWFMIRAYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V Y + + + + + I ++V A + L + S
Sbjct: 238 AVQPFAYLQLVFASTLGLIVFNETLRINVVIGAAMIVAAGLFTLWRARVKS 288
>gi|88858352|ref|ZP_01132994.1| hypothetical protein PTD2_13219 [Pseudoalteromonas tunicata D2]
gi|88819969|gb|EAR29782.1| hypothetical protein PTD2_13219 [Pseudoalteromonas tunicata D2]
Length = 315
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 93/281 (33%), Gaps = 15/281 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A LWG + + ++ + VI R+L +L + +
Sbjct: 8 LCLIIATFLWGSSFIALKYAIAIYDPAVVIFARMLTTLLICLLLWRFVKRF------DYQ 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++ S +++ F +A+ P+I L LKE+L+
Sbjct: 62 SGDWKYLVSMSLAEPCLYFLFEGHAMEYTSASQAGVLVSCLPIIVAVLAFYLLKEQLSKA 121
Query: 147 QIIAALLIILSLLIMTL--HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
II L I +++TL + + S + L+
Sbjct: 122 IIIGFSLCIGGSILLTLVSPHSDQAPNPLLGNFLEFLAMICAAYYTVSVKHLAARYSPLS 181
Query: 205 IPALF------YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ AL + F + + L + + +++Y I + + T
Sbjct: 182 LIALQGLSGSLFFAPFLFFVDLPTEINSSAIFSILYLGTFVTLGGYGLYNYAISKISVLT 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ ++ S IL++ + + + G+V I ++V
Sbjct: 242 AAAFSNLIPIFALLLSAIILQEVLTLWQWLSIGVVFIGILV 282
Score = 39.5 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 35/104 (33%)
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + + + F + + F + ++ S
Sbjct: 35 VVIFARMLTTLLICLLLWRFVKRFDYQSGDWKYLVSMSLAEPCLYFLFEGHAMEYTSASQ 94
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G++ P+++ V + ++LK+ + I F + + ++ L
Sbjct: 95 AGVLVSCLPIIVAVLAFYLLKEQLSKAIIIGFSLCIGGSILLTL 138
>gi|325293799|ref|YP_004279663.1| permease [Agrobacterium sp. H13-3]
gi|325061652|gb|ADY65343.1| permease [Agrobacterium sp. H13-3]
Length = 295
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/287 (11%), Positives = 86/287 (29%), Gaps = 16/287 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + A + WG + + + +S + R + ++ +F V +
Sbjct: 4 KAYLALIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLAVAIIFAISV----PQLIKDW 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + V + F AL + P++ L + + R+
Sbjct: 60 PVVKKRLPYFFVLGSIGYTAFNVFLYTALQHTSAINAAVIQAGIPMVIFVLNFILFRTRV 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGS 192
QI L I + ++ H + L + ++ Y + P+
Sbjct: 120 LFGQIAGFCLTIAGVALLASHGDPVSLLQLEMNAGDAIMLLAVLVYAIYTVILRWKPIVD 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
A+ +V+ S + L + + ++ G++
Sbjct: 180 WRTLMAIPAFFALLTSVPLVFWEISRDNVVWPDQRGWVLVVYAAIFASLIAQILYIKGVE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + G+ P+ + SV +L + + + + + + V
Sbjct: 240 QIGANRAGLFINLVPVFGTLLSVIVLSETLHPYQIAALVMALAGIAV 286
>gi|260221435|emb|CBA29995.1| hypothetical protein Csp_A14940 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 290
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 80/294 (27%), Gaps = 7/294 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L L + ++W + T+ LE EV R +++ + + SG
Sbjct: 1 MKLSHNRAVLLMVLVALMWSTAGVVTRHLESARSFEVTFWRSFFTVISLLAILPVVSG-- 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K A S +V + F+ AL + + P+++ + +F
Sbjct: 59 --KGVFAKLRSATPAFWLSGMCWSVMFTAFMVALTLTSVGNVLVTMSMGPLLTALMARIF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI---PVGSSEG 195
+ R+ +A L+ ++ M + V +G
Sbjct: 117 IGHRIPARTWVAVLVAGAGIVYMYASQVGSITLWGTLVALCVPIAGATNWTVTQHAHDQG 176
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I++ L + + + K
Sbjct: 177 HDIDLMPAVWVGGVISCIVTLPLALPLQATAHDVALLGFLGVFQLAVPCVLSVRVAQVLK 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +++ + I+ + + + +V+ A++V L
Sbjct: 237 APEISLLQLLEVIFGILLAWLGANEAPGSAVVSGGALVIGALLVNELIGWRQRK 290
>gi|257065384|ref|YP_003145056.1| DMT(drug/metabolite transporter) superfamily permease [Slackia
heliotrinireducens DSM 20476]
gi|256793037|gb|ACV23707.1| DMT(drug/metabolite transporter) superfamily permease [Slackia
heliotrinireducens DSM 20476]
Length = 309
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 84/293 (28%), Gaps = 19/293 (6%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A +WG+ + + ++ + L +I+ R + + + +
Sbjct: 19 MLLLAAAVWGLGTVVLKDTVDALPPLWLIAVRFVLAGIILGAVCY-------PRMRDHLD 71
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ F + V +G LL ++ V+ F+ K + +
Sbjct: 72 RDTLLAGAFLGVFVGVSYGLNTIGLLYTTAAKSTVLTSAYCVMVPFVAWAASKIKPSLFN 131
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFARKTIPVGSSEGF 196
++AA L + + ++L L + A+ +
Sbjct: 132 LVAAALCLSGVGFVSLQGSTEGLFTIGLGESITLLAAVFFALQIAYMAKLGDGRDAMVLT 191
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ V + F + + + + G+
Sbjct: 192 VVQFLVGGGLCAVGGLLFEGPLPLEAFSDPAVVRNLAYLIVVASCLALSLQNVGLAHVSP 251
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + L ++ S+ L + + + F ++ ++V+ + S
Sbjct: 252 APAALFLASESLFGVIFSILFLGEAVSANVIVGFVLITSSIVISETFPYLRSR 304
>gi|222100535|ref|YP_002535103.1| hypothetical protein CTN_1561 [Thermotoga neapolitana DSM 4359]
gi|221572925|gb|ACM23737.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 293
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 96/294 (32%), Gaps = 13/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++G++ L+T+ L+ V+ L +S R + + ++ + L
Sbjct: 6 LLSGLAYSTIFGLSFLFTKNALDYVTPLTFLSLRFIVAFLSYLLLLITGAVKLG------ 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ F Y L + PV+ L LKE+ +
Sbjct: 60 -KKPYWKLWKLVLFQPVLYFLFETYGLQRVNSSEAGMIIALIPVVVNLLAPFILKEKGDL 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + + L + + + P + +AV A I
Sbjct: 119 LHYLLVGMGFLGVSFIVGFNITPGNIAGKVFMLLAVLSGAMYSVFSRKFSKEFTPTEITF 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A+F+ + + +G L L ++ F + +Y I++
Sbjct: 179 FMMMTGAVFFTLLSLSTGDFRPVFNVDVVIGALYLGVLSSTVAFFLLNYAIRKLSPIFTT 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ +++ V + + + G+++ ++++ L K
Sbjct: 239 LFSNFTTVVSVIAGVVFRNETVGIQQIAGMGLIISSLIIMSLRRSYKRLSRAQK 292
>gi|168186856|ref|ZP_02621491.1| integral membrane protein DUF6 domain protein [Clostridium
botulinum C str. Eklund]
gi|169295207|gb|EDS77340.1| integral membrane protein DUF6 domain protein [Clostridium
botulinum C str. Eklund]
Length = 280
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 88/287 (30%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G +F+ A + + L+ + + + + + V F I Y
Sbjct: 1 MNKSKGIIFMILASLSFATMNLFGKLATTATPYQKTFISNVIASIIVCFIIFYRKESFIG 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ K + + ++L + ++P ++ + LK
Sbjct: 61 KKENRKYLVLR------GVMGTISILTLYFSLDHLFLADATILTKLSPFFTIIFSFLILK 114
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + Q+ ++ L L + + ++ SA + G
Sbjct: 115 EMITKKQLSFLIVAFLGSLFVIKPQFNSSIIPSLMGVISAATAGIAYTMIRIL-GDRESF 173
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + F + +FLI GL + + K A S +
Sbjct: 174 YTIILSFTGIATLTMFPSMFIHNSITLNHYIFLILGGLCFTVGQAFLTLAYKNAPASEIS 233
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ +Y L + K+ D + I + I++ + ++ ++ +
Sbjct: 234 MFDYCGLLFAGTYGFMLFKEIPDVLSIIGYVIIIGSSILNIIFNKKH 280
>gi|167580296|ref|ZP_02373170.1| hypothetical protein BthaT_19237 [Burkholderia thailandensis TXDOH]
gi|257139789|ref|ZP_05588051.1| hypothetical protein BthaA_11396 [Burkholderia thailandensis E264]
Length = 310
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 89/297 (29%), Gaps = 16/297 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L+V + +G ++ ++ VL ++ R + +
Sbjct: 11 ARRGALYVALSAAAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRWP- 69
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ A + AL Q L + ++ P L + +L
Sbjct: 70 -----RGRALAAIIGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLG 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF---- 196
ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 125 ERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLA 184
Query: 197 ----FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ L F H+ + + F G+
Sbjct: 185 TVAIICCAAAATLVVLALARATVFDAPPHWPRAASGWAALVAIALVSTVAAMLAFFAGLA 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
R + ++ P++ + + + + + ++ + +++A++ + +
Sbjct: 245 RLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWMGGVAILVAVLWLVRAGSSSDR 301
>gi|149907929|ref|ZP_01896597.1| rarD protein [Moritella sp. PE36]
gi|149808935|gb|EDM68866.1| rarD protein [Moritella sp. PE36]
Length = 300
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 52/288 (18%), Positives = 115/288 (39%), Gaps = 2/288 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + L CA+ LW + L L + L+V++ R+++S+ ++
Sbjct: 4 SRSNITLALLANICAFFLWSLATLIFNALSTIDNLQVLAFRIIFSMMFCGLLLILIPSTW 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+++ KN +L S+ +++ +W I+++ Q SF YF+ P++SV L
Sbjct: 64 QIIRQLNKN--EWQVLFISSVLISSNWYLVIFSISLNQLSSASFGYFLAPLLSVALLKWR 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KE + ++IA L L +I+ L + + +
Sbjct: 122 QKEGVTRAEMIAMSLCFLGAVIVVNERYTDSLPWISITIAVTFAYYSVLKKTKAIAPLAT 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
A+ +++ + + F + L+ G + + ++ + +T
Sbjct: 182 LTVETGFAAVPALIFIVLNFTQLSFNFSASQWGLLLSLGAITTLPILLYIGSVVFLSATT 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+G+++Y P LM+ ++ I + I T F I+ + VY + +V
Sbjct: 242 IGLLQYLNPTLMLFVAIGIFGEDISTGVLRGFFILWSGIAVYGICSVY 289
>gi|78063090|ref|YP_372998.1| hypothetical protein Bcep18194_B2243 [Burkholderia sp. 383]
gi|77970975|gb|ABB12354.1| protein of unknown function DUF6, transmembrane [Burkholderia sp.
383]
Length = 307
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/281 (11%), Positives = 79/281 (28%), Gaps = 6/281 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L+ + R L + ++ + + L + PK +
Sbjct: 21 IWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLMLNTASRTQLAAIRREPKLLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +LAV L + F V+ V L +F + R+ ALL
Sbjct: 81 LALGGLLAVSISLQQIGLQYTRIANAGFI-SSLYVVIVPLMGMFARHRIGPGTWFGALLA 139
Query: 155 ILSLLIMTLHSGIPL----LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++++ + A + + +
Sbjct: 140 AIGLYFLSINEHFSVLYGDWFQLAGAVIIAAHVMAVGHFAKRHNPLVLAFMQFVVCGVAC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ + L G L + + + A + ++ +
Sbjct: 200 LAVGLVVEPVSGTMLRNALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ L + + I +++ ++ L ++ K
Sbjct: 260 AIAGWAALGETLTLRALIGCALMLAGLLACQLLPNGDARKK 300
>gi|89092307|ref|ZP_01165261.1| hypothetical protein MED92_05828 [Oceanospirillum sp. MED92]
gi|89083395|gb|EAR62613.1| hypothetical protein MED92_05828 [Oceanospirillum sp. MED92]
Length = 287
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 88/284 (30%), Gaps = 15/284 (5%)
Query: 29 FVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ + + + + + + + VLE+++ R + SL + + K
Sbjct: 12 YMLLSALGFALMAACVKAVSGYGIPVLEIVAARAIVSLVLSYLDV--------KRKRISV 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L + A+ Y++ T + + P + L +FLKE++
Sbjct: 64 WGTHRWLLTARGVVGALALVCVYYSVTTLTLADATVLQYTYPAFTAVLALIFLKEQIKRS 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I+ L + +L+M L + +A A+ A + V
Sbjct: 124 TILCITLSFIGVLVMVRPWSGELEAAMPALSLMAALAGAFGSAAAYVLVRKLSQLEDSSV 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ L + + G F + L L+ G+ + + V
Sbjct: 184 IIFYFPLVALPVSLLLLGNDFVMPGWEALLLLVLVGVFTQVGQVGLTKAMAAEAAGKVSA 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y + V + + + +++ ++ L
Sbjct: 244 YAYVQVIFSAVLGMIFFSEIPTLWTLLGGCLIIAGALINALWKR 287
>gi|311110184|ref|ZP_07711581.1| DMT permease [Lactobacillus gasseri MV-22]
gi|311065338|gb|EFQ45678.1| DMT permease [Lactobacillus gasseri MV-22]
Length = 332
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 100/307 (32%), Gaps = 16/307 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 6 TRSRLWTILAALAAVMWGISGLFAESLFKISSKITPIWLTQIRLIISGVVLLIIAAIL-- 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ + L F+ + + + F+ P + +
Sbjct: 64 HQKPFSILKNKKNTLHIIAYGVFGLLPVQIFYFIVIEMANASIATILQFIGPFFVLAYLA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTI 188
V ++ L L ++AA++ + + +++ H + ++ A
Sbjct: 124 VTHQQVLRKLDVLAAIMAFIGVFLLSTHGNLNHLAITPVALFFGLLSALGEASYTLIPVK 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V + + L V+ + + L F I +
Sbjct: 184 IVKRISSLVLTGWGMIFAGLGLVIVHPSFPAIPN--TSKVWLWVGAIIILGTIVPFQIMA 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K STV +++ PL V SV I + + + +V++A++
Sbjct: 242 NALRYVKPSTVSLLDAFEPLSATVGSVLIFGLVMSGMDWLGTFLVIVAVLALNFTPKRKI 301
Query: 309 GKNKTKK 315
K ++
Sbjct: 302 KKFLKRE 308
>gi|325272592|ref|ZP_08138954.1| hypothetical protein G1E_06603 [Pseudomonas sp. TJI-51]
gi|324102276|gb|EGB99760.1| hypothetical protein G1E_06603 [Pseudomonas sp. TJI-51]
Length = 292
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 83/282 (29%), Gaps = 5/282 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V A L+ ++FL + + ++ V ++ L
Sbjct: 11 NKPLRGIALVVVATFLFASHDALSKFLGGLYPIVMVVW-----ARYVVHTLLMAGIFLPK 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + A L F L + F+ PV+ L + LK
Sbjct: 66 AGLNVLRTRRPLLQTLRALSLLSTSLLFTTGLQYLPLAEATAVNFLAPVLVTALSAPLLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A +L + +L++ G + SA F +
Sbjct: 126 ERVTVAQWVAVVLGFIGVLVVVHPGGAMFTPAILYPFGSALGFCFYQLLTRILAAHDSPT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + L ++ G + + + A + +
Sbjct: 186 TSNFYAGLCNTLAMSALVPFFWEVPRWDHALLMLALGGFGMTAHLLLTQAFRHAAPALLA 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + + + + Q DT+ + ++ ++ +
Sbjct: 246 PFSYCQIVFAGLLGLVVYSQVPDTLSLVGIAVICLSGLGAAW 287
>gi|229159183|ref|ZP_04287211.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
ATCC 4342]
gi|228624285|gb|EEK81084.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
ATCC 4342]
Length = 310
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 99/285 (34%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLL----FSFKQLKRSVAH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVPWKRMNLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L +L++TL S +++ A ++ +
Sbjct: 124 NYWIGIVLGAAGVLLITLPSSNVDQEVSLIGDTLILLSTFLFAFYTVLLKRPKQEQYLSK 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + AI L + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAIILLPFATVETFYYGFPKIETWKAGLSIIYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 244 SVSASVSGLYLNALPLISIVASIVLLDEALTWKIVIGGSLVLIGV 288
Score = 42.2 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 48/143 (33%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLLFSFKQLKRS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VAHKQVPWKRMNLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + +++ LP+
Sbjct: 121 IQLNYWIGIVLGAAGVLLITLPS 143
>gi|212702879|ref|ZP_03311007.1| hypothetical protein DESPIG_00912 [Desulfovibrio piger ATCC 29098]
gi|212673741|gb|EEB34224.1| hypothetical protein DESPIG_00912 [Desulfovibrio piger ATCC 29098]
Length = 303
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 77/304 (25%), Gaps = 12/304 (3%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVF 68
+ L + G + + W + L ++ VS LE R
Sbjct: 5 AASLPSPVSPSTRRHGLILILLTVFAWSVIGLISKNCLAAGVSPLETAFWRAAIGAACFI 64
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
L+ A VF + V + +YA+ + + P
Sbjct: 65 THATLSRQIRIPLR------HAALFTVFGFWAVGVFYAATLYAIKLSGAAMAVVLLYTAP 118
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG----IPLLSLAIAVTWSAYCFA 184
V E + Q L + ++ G + + C+A
Sbjct: 119 VWVAMFSRFLFHEPITSRQCGIIALALAGTGMVCFSGGSLPGQTSWTGIACGLLISVCYA 178
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + A L LI G F F
Sbjct: 179 SHYPFCRWWQDRYTPAPLYAFMQLGGAAVIFCLTPVSLDHSLSTWGWLLILGGFTGYFAF 238
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ +KR L ++ Y P+L + + + +V+ A+ +
Sbjct: 239 FCYAQALKRLGLVRTAVLCYLEPILSTIWVWLFWDEFFSPLGWAGSALVLAAVFWLNMDK 298
Query: 305 VINS 308
+
Sbjct: 299 SRAA 302
>gi|293610781|ref|ZP_06693081.1| predicted protein [Acinetobacter sp. SH024]
gi|292827125|gb|EFF85490.1| predicted protein [Acinetobacter sp. SH024]
Length = 300
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 88/290 (30%), Gaps = 1/290 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + +F +
Sbjct: 69 PLKWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEKI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 SFKQWLCILLGLCGAVLVVSGDHGFGVPSPYSLLIVLAAIAWGLYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ + + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTIPLLFYSTHLPHEILHATWQANMSVVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRT 298
>gi|222094042|ref|YP_002528098.1| hypothetical protein BCQ_0331 [Bacillus cereus Q1]
gi|221238096|gb|ACM10806.1| membrane protein, putative [Bacillus cereus Q1]
Length = 306
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLL----FSFKQLKKSVVH 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 60 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEKIQL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L +L++T+ S +++ A ++ + +
Sbjct: 120 NYWIGIVLGAAGVLLITIPSSNGNQEVSLIGDTLILLSTFLFAFYTVLLKRPKQEQYLSN 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 180 KVFTTLTLIIGAVILLPFAMIETFYYGFPEIETWKTGFSVMYLVIGATILAYWFWNRALE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 240 TVSASVSGLYLNALPLISIVASIALLDESLTWKIVIGGSLVLIGV 284
Score = 40.7 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ + +P
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLLFSFKQLKKSVVHKQVP 63
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S LK+ I I
Sbjct: 64 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEKIQLNYWI 123
Query: 289 VFGIVVIAMVVYLLPT 304
+ +++ +P+
Sbjct: 124 GIVLGAAGVLLITIPS 139
>gi|168058887|ref|XP_001781437.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667074|gb|EDQ53712.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/307 (10%), Positives = 95/307 (30%), Gaps = 14/307 (4%)
Query: 8 KEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPG 66
+ ++ E++ + +++ TL + + WG + + L + + V S R++ +
Sbjct: 53 ETKNEKTDSESSLIESVLDTLLLLSPFFFWGTAMVAMKGILPKAGPMFVASTRLIPAGAL 112
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
V + G++ + + G + + S V
Sbjct: 113 VIGFASAKGKKMPAGSSAWFAIALFGLVDATCFQGFLTEGLRRTSAGLGSVIIDSQPLTV 172
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT---------LHSGIPLLSLAIAVT 177
+ S+ G + L + L++L + + + L A +
Sbjct: 173 AILASILFGETLGPIAIVGLGLGVVGLVLLEVNTLLENHSSRTWSIWDSGEWWMLLAAQS 232
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLA----IPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + + S ++ + AL + G L
Sbjct: 233 MAVGTVMVRWVSKFSDPIMATGWHMILGGLPLLALSVWQQDPAISGHIQDLSASDWAALF 292
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
++ + +F Y + L+ + + + P+ +L + ++ ++ +
Sbjct: 293 YTSVFGSAISYGVFFYNATKGNLTKLSSLTFLTPMFAAFFGYLLLDEKLNGIQLAGASVT 352
Query: 294 VIAMVVY 300
++++ +
Sbjct: 353 LLSIYLV 359
>gi|116051492|ref|YP_789674.1| hypothetical protein PA14_19160 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115586713|gb|ABJ12728.1| putative chloramphenicol-sensitive protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 299
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 61/293 (20%), Positives = 111/293 (37%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A +L+ P Y LE + L+V++HRV+WS+P VF +V +
Sbjct: 6 QGVLLSLAASVLFVTLPGYVHLLEPLDSLQVVAHRVVWSIPMVFLLVVATRQWPTLRAAW 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + +A ++ + WG FI+A L + S YF+ P+ V +G VF E
Sbjct: 66 RRLFAEPWLLACFPLTAAMMLLQWGIFIWAPLAGKTLELSLGYFLLPLAMVLVGRVFYGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL LQ IA + +L +++ + +G
Sbjct: 126 RLTSLQAIAVACALAGVLHEFW-LTRAFSWVSLVTALGYPPYFMLRRRMGVDALSGFVFE 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L + L F L L GL+++ F + + GI
Sbjct: 185 MLFLLPLALAALYWLGDESQAFREAPRLWLLLPMLGLISALAFGAMMASSRLLPMGLFGI 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ + +V L + + + + +A+++ + K +
Sbjct: 245 LSYVEPVLLFLVAVLFLGEAFRPEQLWTYAPIWLAVLLTGWDSARLLRKQARR 297
>gi|120556717|ref|YP_961068.1| hypothetical protein Maqu_3812 [Marinobacter aquaeolei VT8]
gi|120326566|gb|ABM20881.1| protein of unknown function DUF6, transmembrane [Marinobacter
aquaeolei VT8]
Length = 323
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 84/283 (29%), Gaps = 11/283 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + ++ ++ + L+ V + R + +L + D
Sbjct: 10 ILLLVIGNAMAILSDVFIKLLDPGAPVFQFAFLRCVLTLAFLLPLA--------RKLDRN 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A I V + AL + ++ P + + L +VF E+L
Sbjct: 62 NLFGGLKIHAIRAHIHLVGIVCMVVALTNLPLATANALFYAAPTLVMVLSAVFFSEKLTP 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L + A ++++ + IA SA+ A + V + L +
Sbjct: 122 LSVTAVFSGFAGIIVILRP--VDFNWAVIAALGSAFALAINAVMVRQLPKEQTTVHKLFL 179
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L V N + G L ++ + V EYT
Sbjct: 180 NYLLIVPAAAALALWEGAAWNPQILISAAGSALFILGYNITVLLAYRQVDANQVTSAEYT 239
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + D ++V+ +V+ L S
Sbjct: 240 GLIWAVAIGWIWFGEVPDLWFLAGSLMIVVPLVLIGLRHRKRS 282
>gi|296132708|ref|YP_003639955.1| protein of unknown function DUF6 transmembrane [Thermincola sp. JR]
gi|296031286|gb|ADG82054.1| protein of unknown function DUF6 transmembrane [Thermincola potens
JR]
Length = 306
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 86/288 (29%), Gaps = 15/288 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N+ ++ L + +WG T + + + +V ++ R + +
Sbjct: 2 NSRKNQLLADLALVFVTAVWGATFVSVKEAITRVEPFYFLAIRFGIATLLMLLIT----- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + L + F + L F ++ VI + +
Sbjct: 57 ---NKRIVQTTRSTLWKGILIGLALFAGYSFQTFGLQYTTASNAGFITGLSVVIVPVIVT 113
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG- 195
K+ + + + + L ++T+++ + + V + A+ +A + VG
Sbjct: 114 FIQKKPPGIISALGIISATVGLGLLTINATLTFNYGDLLVLFCAFSYALHILLVGKYSPD 173
Query: 196 -----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
A F + LI + F + ++
Sbjct: 174 HDAFILATVQIGTVALASFVAALIKETAPTAEAFNAQVWRAILITAVFATALAFFLQTWT 233
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
K + I+ P+ + + FI + + I ++ M+
Sbjct: 234 QKYTSPTHTAIIFTMEPVFAAIFAYFIGGESFTLRQGIGAVCILAGML 281
>gi|229037615|ref|ZP_04189475.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
AH1271]
gi|228727705|gb|EEL78821.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
AH1271]
Length = 310
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 104/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLL----FSFKQLKRSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIMLGAIGVLLITVPSDNTNQEVSLVGDILILLSTFLFAFYTILLKRPKQERYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + A+ L + + F G + + ++ ++
Sbjct: 184 NVFTTLTLIIGAVILLPFAMGEIFYYGFPKIETWKTVFSVMYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ I++S+ +L + + I +V+I +
Sbjct: 244 RISASVSGLYLNALPLISIITSIVLLDESLTWKVIIGGSLVLIGV 288
Score = 39.9 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLLFSFKQLKRS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I +++ +P+
Sbjct: 121 IQLNYWIGIMLGAIGVLLITVPS 143
>gi|206563848|ref|YP_002234611.1| hypothetical protein BCAM2004 [Burkholderia cenocepacia J2315]
gi|198039888|emb|CAR55863.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 310
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P +F +
Sbjct: 2 KTRLIGYLYLAAAMAGVGSTVIASRLAAGGLPPFAATALRFLIATPLLFALMRAQRMRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ AV +++ +A + I P +S + +V L
Sbjct: 62 RIAA----RDAVLLVIQAAAGGVGYTVLLISGTKLSSPLDAGVMLGTLPAMSTLIAAVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIP 189
+ER +AA L +L +T G + SL + + + +
Sbjct: 118 RERQTPRDWLAAALATAGVLFVTFAPGHAMPSLRTLAGDALVLAAVACEAVFILLNRRLA 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
L V + + + + +
Sbjct: 178 APLPPLALSTAMSGLGFVLALVPAAFEWRAVASGWTVGAVSAIVYYALIPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + R +VV M+V
Sbjct: 238 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLTGTRVAGIALVVAGMLV 287
>gi|150005677|ref|YP_001300421.1| hypothetical protein BVU_3167 [Bacteroides vulgatus ATCC 8482]
gi|254884110|ref|ZP_05256820.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|319640875|ref|ZP_07995586.1| hypothetical protein HMPREF9011_01183 [Bacteroides sp. 3_1_40A]
gi|149934101|gb|ABR40799.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|254836903|gb|EET17212.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|313677881|gb|ADR74142.1| hypothetical protein [uncultured bacterium 52B7]
gi|317387512|gb|EFV68380.1| hypothetical protein HMPREF9011_01183 [Bacteroides sp. 3_1_40A]
Length = 295
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 84/294 (28%), Gaps = 8/294 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+++R + +
Sbjct: 1 MNRIKGILYAAVSSATFGLAPFFSISLLAIGYSSFEVLTYRWGVATVVLLVFAFLTKCDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + +L + T ++ + A + V ++VF
Sbjct: 61 HIGYKDFKTIFGLSLLR-ALTSFSLVIAYQNIASGVASIIHFMYPLAVAVTMAVFFREKK 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS----- 193
+ + +LS + + G ++ L A +
Sbjct: 120 SIVTFAAIVLSLVGASLLSSGNIEYNGGNRMMGLIAACISVFSYAGYIIGIRKTRAVEVN 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ F + + G I + +K
Sbjct: 180 STVLTCYVMGLGALFFLLGGLFYDEGVRLETNVITWLYIGGLALPATAISNITLVKAVKL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + ++ PL ++ VF+ K+ T + +VVI++ + L
Sbjct: 240 AGPTLTSLLGALEPLTAVLVGVFVFKELFTTYSALGIILVVISVSLVLFQQKRT 293
>gi|134093824|ref|YP_001098899.1| putative efflux transporter [Herminiimonas arsenicoxydans]
gi|133737727|emb|CAL60772.1| putative Permease of the drug/metabolite transporter (DMT)
superfamily [Herminiimonas arsenicoxydans]
Length = 306
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 93/298 (31%), Gaps = 15/298 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIV 72
+ A ++G L +L+ + + + V + +I+ R+++SLP +
Sbjct: 9 AASAARKLFLIGLLIGIAGAVLFSTKAIVAKLIYRYDVDAVTLIAFRMMFSLPFFIVIGI 68
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ S + L K +++ + L L F+TP +
Sbjct: 69 WKSRNATSLSGKEK----WQIVLLGLIGYYLSSFLDFLGLQYISAGLERLILFLTPSFVL 124
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCF 183
+ +K++++ ++ A L +++ +H + AV+++ Y
Sbjct: 125 LISVFLMKKKISVIEWAALGTSYLGTILVFMHDVRIGGNGVVLGSVLVLCSAVSYAIYLV 184
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + + L +I
Sbjct: 185 GTGELVRRVGALRLVAYAMCVSSVACIGQFFLLRPTSMLIQPMAVYNLSMINAFFCTVLP 244
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + R +T P+ + + +IL +PI ++ +V+ + +
Sbjct: 245 VFLTMIAVDRIGAATASQAGMIGPVSTLFLAAWILGEPITGIQLAGTALVLCGIYLLS 302
>gi|126739423|ref|ZP_01755116.1| hypothetical protein RSK20926_20940 [Roseobacter sp. SK209-2-6]
gi|126719523|gb|EBA16232.1| hypothetical protein RSK20926_20940 [Roseobacter sp. SK209-2-6]
Length = 307
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 85/300 (28%), Gaps = 11/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G LF+ + + + ++ + L + V +++ + S + L
Sbjct: 1 MNNLNGILFIIASMAAFTLEDMFIKRLSGEIPVGQILIMLGVGSGSVFAVMALIKGENLF 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + P++ ++FL
Sbjct: 61 APKAWRGVVLLRSAAEALGAMAFATALSLVDISTVAAV------FQALPLVITMGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS---AYCFARKTIPVGSSEGF 196
E++ + A + ++++ I V + T V S+
Sbjct: 115 GEQVGWRRWSAICVGFAGVMMIVRPGLDGFDPSVILVLLAVLAIAARDLLTRLVDSNISS 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + GE ++ ++G L + +
Sbjct: 175 TVVSFQAFASLILAGLALLLITGEQARGIDLRQGGMMLGGILFGVLGYYAIVVATRIGDA 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
S + Y+ L I+ V + + D + G+++ +Y K +++
Sbjct: 235 SAITPFRYSRLLFSILVGVIVFGERPDALTLCGAGLII-GSGLYTFMRERRMVKQAQREA 293
>gi|46578822|ref|YP_009630.1| hypothetical protein DVU0406 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448234|gb|AAS94889.1| membrane protein, putative [Desulfovibrio vulgaris str.
Hildenborough]
Length = 312
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 77/279 (27%), Gaps = 16/279 (5%)
Query: 33 AYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A WG T + + + R + + + + L + +
Sbjct: 33 AAFFWGGTFVAGRIGAAHAGPFALAFLRFTLATAIL---VWHIRRREGALPQVSGSRNIL 89
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+L+ AT + + F AL T + P++ ++FL E L + I
Sbjct: 90 FVLLLGATGIFAYNALFFTALQTIPAGRAAVVVANNPIVIALGAALFLGEPLTRRKCIGI 149
Query: 152 LLIILS----------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + + + ++L + A + S
Sbjct: 150 AISVCGALVAVTRGDPVSFLQGGVSWGDVALVGCLASWAAYSLLGKKAMSSLSPLAAVTW 209
Query: 202 VLAIPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
A A + + + + F F G+ R +
Sbjct: 210 SCASGACMLLPFALHEGMLDAITTYTPDVWASIFYLGMFGTALGFTWFYEGVDRIGAAKA 269
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G+ P+ I+S L +P+ + +V+ +
Sbjct: 270 GVFINFVPITAILSGWLFLGEPLSPSLILGAALVLTGVY 308
>gi|117925665|ref|YP_866282.1| hypothetical protein Mmc1_2376 [Magnetococcus sp. MC-1]
gi|117609421|gb|ABK44876.1| protein of unknown function DUF6, transmembrane [Magnetococcus sp.
MC-1]
Length = 317
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/282 (10%), Positives = 90/282 (31%), Gaps = 8/282 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G L++ A + + +++ + ++++ R L+ + + ++ G +
Sbjct: 28 SPNVRGALWLLQAGLFFSTVGALVKWIGSDLDAMQIVFLRCLFGMLLLLPLLLRKGGAI- 86
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + A + + YA + F P+ + L +FL
Sbjct: 87 ------LRTQRPRIHAVRAVVGILAMLTTFYAYANLPLADVTALSFTNPLFMIPLAVLFL 140
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E ++ + A L+ +++M P A S A +
Sbjct: 141 GESIHWRRWSATLVGFAGVVVMLRPGDAPFTLALWAAILSPLLIAMVQVLFKRMSSTEST 200
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ A+ + + + + L + + + + K + + +
Sbjct: 201 LTIIGRYAVASTLLSLPLALGVWRWPTLEALLLIALASAFGNLASAMLVWAYKVGEATAI 260
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+YT ++I + + I++ A + +
Sbjct: 261 APFDYTRLFFATGFGIWIFDETTSLHTWLGAAIILAATLYIV 302
>gi|330718144|ref|ZP_08312744.1| putative integral membrane protein [Leuconostoc fallax KCTC 3537]
Length = 305
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 103/299 (34%), Gaps = 14/299 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSG 76
+ G +F +G+ PL+ L ++ V ++ +R +++ + ++
Sbjct: 1 MKNKALRGVVFGILGAAAYGLNPLFAVPLMNLNFTVDSMVFYRYFFAVILLGCLMLAKRQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + ++ ++A+ F + L S F PVI + +
Sbjct: 61 SFKL------QRDEIIPVIAVGLLMALASLFLYGSYEYMDVGLASILLFAYPVIVALIMA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------VTWSAYCFARKTIPV 190
+F KERL+ L I A L++L + ++ L L + ++++ Y +
Sbjct: 115 IFFKERLSLLTIGAISLVVLGIALLNNSGQKSLNPLGLLIILLASMSYALYIVGVRQTTA 174
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + L+ + +++ + G + + + +
Sbjct: 175 HAVPSLKLTFYGLSAGLVLFLIKGMLNHGIQPLTTPLEYGNAIGSAIFPTIIALSLTNLA 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I + I+ PL + V + + I + ++++A+ + I +
Sbjct: 235 ITHIGSTNTSIVGALEPLTGLFVGVVVFNEIITVQNMVGVMLIILAVTSVVASQYIIAW 293
>gi|323492754|ref|ZP_08097898.1| putative permease [Vibrio brasiliensis LMG 20546]
gi|323313129|gb|EGA66249.1| putative permease [Vibrio brasiliensis LMG 20546]
Length = 290
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/287 (9%), Positives = 94/287 (32%), Gaps = 12/287 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+F L G+ ++++ ++ + + R L + + + L++
Sbjct: 11 LFATTALAGLGWIFSKETIQGLPPFGFVGLRFLVASICLLPLCIKRFRELTVAL------ 64
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + ++ +F ++ +I + + ++R
Sbjct: 65 -LGQAMGGGVILSLALLSWVYAISISETLGEGAFIVSLSMIIVPIIAWILYQDRPKRAFW 123
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEGFFIEMCVLA 204
+ + + L +++L +G + + +A F + + L
Sbjct: 124 FSMPIAVAGLAMLSLTNGWNSSAGQLWFLANACLLALHFNVNSKLARKVPVLLLTCIQLF 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + ++ + + F + L S + + + G K + ++
Sbjct: 184 VTGVIALIASALFETFPTSVDASIWGWFALSALLATSLRYVMQTLGQKGCNPANAALIML 243
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ +V S+ + + + I G+++ A++ Y + ++
Sbjct: 244 FEPIWTVVLSIVWYGEQLSGNKLIGCGLILTALIFYRTDGRLLKRRH 290
>gi|149915836|ref|ZP_01904360.1| integral membrane protein, putative [Roseobacter sp. AzwK-3b]
gi|149810159|gb|EDM70005.1| integral membrane protein, putative [Roseobacter sp. AzwK-3b]
Length = 320
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/296 (9%), Positives = 93/296 (31%), Gaps = 7/296 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + + + + I + + L V + +++ R + + V +
Sbjct: 22 PRSDNLTGAVLMMASMAAFTINDTFMKALAGEVPLFQLLFLRGVLTTLAVGGIAWWMGAF 81
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ L + ++ + AL + P+ ++
Sbjct: 82 RARLSRRDTGSIVLRIVGEIGAAYFF-----LTALFNMPIANVTAILQAIPLTITLAAAL 136
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F + + ++ A L+ + ++++ + + + +
Sbjct: 137 FFGDPVGWRRLSAILVGFVGVMLIVRPGADDFTIYSFYALAAVGFVTLRDLATRRLARET 196
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
M V I + +V+ G + ++ ++ + +G ++ + ++ ++
Sbjct: 197 PSMLVTFITSGSIMVFFGLASLTGDWVPMDLRAGVLTMGASVMIIGGYLCSIMVMRVGEI 256
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S + YT + +V + + + + + +VV + + L K +
Sbjct: 257 SFIAPFRYTGLIWALVLGWLVFDEWPEPIALVGAAVVVGSGLFMLYREAQLGRKRR 312
>gi|146306849|ref|YP_001187314.1| hypothetical protein Pmen_1818 [Pseudomonas mendocina ymp]
gi|145575050|gb|ABP84582.1| protein of unknown function DUF6, transmembrane [Pseudomonas
mendocina ymp]
Length = 283
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/279 (10%), Positives = 83/279 (29%), Gaps = 2/279 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ L + +L+G++ ++ + L + + R L+++ + V + +
Sbjct: 1 MKERNALLAIHLGALLFGLSGIFGK-LAATTPNMIAGGRALFAILALGLTAVLWR-NRNA 58
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ L+ + + V + + L S+ V+ L
Sbjct: 59 LRPNLRQVALLAIGGLLLGAHWVTFFEAVKVAGVAIATLGFASFPAFTVLLEGLLFRERT 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + L ++ + + L AV + S+ G
Sbjct: 119 RPMEFAMVGVVCLGLVLVTPEFSLASTATGGLLWAVLSGFLFALLSLLNRASTRGLDPVQ 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L +V + + + + + +F ++ K T
Sbjct: 179 AALYQNLTVFVCFMPLAWPLLPSVRPMDWLWLAMLGIFCTGLAHSLFVASLRVLKARTTA 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P+ I+ + ++ + ++V A+ V
Sbjct: 239 VIFALEPVYGILFAWWLFSEQPTLRMLAGGVLIVGAIFV 277
>gi|86134890|ref|ZP_01053472.1| drug/metabolite permease [Polaribacter sp. MED152]
gi|85821753|gb|EAQ42900.1| drug/metabolite permease [Polaribacter sp. MED152]
Length = 272
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 87/269 (32%), Gaps = 8/269 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + + + + + ++L +V +++ R + +L I+ K
Sbjct: 1 MIFSVVAFALMSSFVKYLSDFNVYQIVFFRSIGTLFFTLPLIIKNRISFFGNKKKWL--- 57
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ V F +L +V P+ + +FLKE++ +Q
Sbjct: 58 -----FLRGLLGVVSLTCFFQSLNYLPVGTAVSLRYVAPIFAAIFAYIFLKEKIKPIQWF 112
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ + +LI+ V SA + + + ++ +
Sbjct: 113 LFFIAFVGVLIIKGFGTDVNYIGLFFVLLSAIFLGLIFVVIRKIGTSENPLIIINYFMVM 172
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
V+ G ++ + L + G+L + + + + + ++Y ++
Sbjct: 173 AFVFGGLMSIPYWRNPTTIELLLFLSTGVLGYMGQLYMTKAFQAQETNLIAPIKYLEVVI 232
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I+ F + + + ++V ++
Sbjct: 233 TIIIGAFWFGEVYNLWTILGILLIVSGLI 261
Score = 36.4 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 38/109 (34%)
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F ++ ++ + + ++ +L GLL F +
Sbjct: 16 KYLSDFNVYQIVFFRSIGTLFFTLPLIIKNRISFFGNKKKWLFLRGLLGVVSLTCFFQSL 75
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ T + Y AP+ + + LK+ I ++ +F I + +++
Sbjct: 76 NYLPVGTAVSLRYVAPIFAAIFAYIFLKEKIKPIQWFLFFIAFVGVLII 124
>gi|160942192|ref|ZP_02089507.1| hypothetical protein CLOBOL_07082 [Clostridium bolteae ATCC
BAA-613]
gi|158435083|gb|EDP12850.1| hypothetical protein CLOBOL_07082 [Clostridium bolteae ATCC
BAA-613]
Length = 309
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 86/292 (29%), Gaps = 18/292 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L F ++WG T + T+ L S +E++ R + ++ A
Sbjct: 3 HNRTAAGHLAAFVTILIWGTTFISTKVLLRTFSPVEILFIRFVMGYLALWLA------CP 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T + + + + I T + ++
Sbjct: 57 RSLRLTSARQEGLYAAAGFCGVTMYYLLENIALTYTLASNVGVIISIAPFFTAILGWMFL 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP--------- 189
ER LL + + +++ +G L + +
Sbjct: 117 GGERPRFRFFAGFLLAMAGISLISFGNGAALSLNPTGDLLAVAAAVIWAVYSTLTKKISA 176
Query: 190 --VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
G+ + + + + + F F L ++ F +
Sbjct: 177 LGHGTVQSTRRTFFYGILFMVPALAFMDFYVTPAQFTDMKNILNLLFLGLGASALCFVTW 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+K + Y P++ ++S ILK+P+ + + + + +
Sbjct: 237 NTGVKILGPVKTSVYIYMVPVITTLTSALILKEPVTIPAALGIIMTLAGLFL 288
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 11/132 (8%), Positives = 29/132 (21%), Gaps = 1/132 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
A F + + Y+ + L
Sbjct: 10 HLAAFVTILIWGTTFISTKVLLRTFSPVEILFIRFVMGYLALWLACPRSLRLTSARQEGL 69
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK-QPIDTVRTIVF 290
+ + + + + + S VG++ AP + L + F
Sbjct: 70 YAAAGFCGVTMYYLLENIALTYTLASNVGVIISIAPFFTAILGWMFLGGERPRFRFFAGF 129
Query: 291 GIVVIAMVVYLL 302
+ + + +
Sbjct: 130 LLAMAGISLISF 141
>gi|154688159|ref|YP_001423320.1| hypothetical protein RBAM_037640 [Bacillus amyloliquefaciens FZB42]
gi|154354010|gb|ABS76089.1| hypothetical protein RBAM_037640 [Bacillus amyloliquefaciens FZB42]
Length = 305
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 84/291 (28%), Gaps = 11/291 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G V ILWG++ Q+L + + S R+L S + I Y
Sbjct: 13 SRTTGIWLVLTGAILWGVSGTVAQYLFQHRHFNTEWLTSVRLLVSGA-LLLGIAYRKEKG 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L+F + + A+ + ++ P I ++
Sbjct: 72 RIWAVWKDRRDRIPLLLFGIFGMLGVQYTYFAAIEYGNAAAATVLQYLGPAIITCFLAIR 131
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K + +++A LL + I+ H + I+ ++ + + +
Sbjct: 132 AKRIPSAKELLAVLLAVAGTFILVTHGNVGSLSISGLAVFWGISSAFALAFYTLQPHRLL 191
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G I + + + + F + +
Sbjct: 192 KKWGSAIIVGWGMLIGGAALSLIRPPWKFEGEWSFPAYAAIVFIIIFGTLIAFYCYLESL 251
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
K S ++ PL +V L P + +++ + + +
Sbjct: 252 KYLSASETSLLACAEPLSAAFLAVIWLHVPFGISEWLGTFLILATIALLSI 302
>gi|154507888|ref|ZP_02043530.1| hypothetical protein ACTODO_00372 [Actinomyces odontolyticus ATCC
17982]
gi|153797522|gb|EDN79942.1| hypothetical protein ACTODO_00372 [Actinomyces odontolyticus ATCC
17982]
Length = 305
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 96/302 (31%), Gaps = 12/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVI---SHRVLWSLPGVFFAIVYFSGG 77
+ +G+L A + WG + + +L + +E+ R+ S ++ S G
Sbjct: 1 MRNALGSLVTVVAALCWGASGVSADYLMEHHGIELTLISFFRMFVSGILALVYVLARSCG 60
Query: 78 LSLLKDT--LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+S + +++++ LA ++ + + ++ ++ V
Sbjct: 61 VSARHRELVSSSRNWRDLVIYAIFGLAACQITYMGVIRASNAGTGTVLEYLGLILIVVWV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTI 188
+ + ++IA +L + ++ + L+ + +
Sbjct: 121 CLTHRRWPRASEVIAIVLAVTGTFLLCTNGSLDSLVITPTALAWGAVAALTRATYTLLPA 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ ++ G + + + A V G H L + F
Sbjct: 181 RLIAAYGVDVVVAYGLLIAGACVGLVGRVWRFHITWTPDVVLAMFSTVVLGTAVASTAFL 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+G+ R ++ P+ S ++ + ++V A+V + ++ +
Sbjct: 241 WGVDRIGPVKASLIGSLEPIAATAFSALVMGSSYTGIDIAGMALIVGAVVTISVVDLLRA 300
Query: 309 GK 310
+
Sbjct: 301 RR 302
>gi|332664969|ref|YP_004447757.1| hypothetical protein Halhy_3021 [Haliscomenobacter hydrossis DSM
1100]
gi|332333783|gb|AEE50884.1| protein of unknown function DUF6 transmembrane [Haliscomenobacter
hydrossis DSM 1100]
Length = 313
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 95/298 (31%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ ++ ++ V A + + + + ++ + +++ R+++SLP ++
Sbjct: 15 SQRRRIIASVLVLIAALCFSAKAVLVKLAYRYEIDSISLLTLRMVFSLPFFLAIAIWAKN 74
Query: 77 G--LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + + + + + L L F+ P + + +
Sbjct: 75 RAVKENRHIILSRREWFYIFILGLSGYYLASMLDFIGLAYITAGLERLILFLYPTMVLGM 134
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI----------PLLSLAIAVTWSAYCFA 184
+F K+ + +Q IA L + + L +L T++ Y
Sbjct: 135 NVLFFKKTVTRVQWIALALTYGGVALALLDRTQLGVGSNVPLGAILIFFSGFTYAIYLVG 194
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + ++A + + TL +I
Sbjct: 195 SGQYIAKVGSLRYTCLAMIAASIGVIAQHGIIYQWDLWHYPLQVYTLSIIMAIFSTVLPT 254
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ S I+ V I+ P++ I+ F+L + + + +V+I ++ L
Sbjct: 255 FMMSEAIRIIGSGNVAIIGSIGPVVTIILGYFLLGESFGIWQLLGTILVIIGVLRISL 312
>gi|153956032|ref|YP_001396797.1| transport protein [Clostridium kluyveri DSM 555]
gi|219856372|ref|YP_002473494.1| hypothetical protein CKR_3029 [Clostridium kluyveri NBRC 12016]
gi|146348890|gb|EDK35426.1| Predicted transport protein [Clostridium kluyveri DSM 555]
gi|219570096|dbj|BAH08080.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 302
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 89/293 (30%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + V A +LWG++ Q+L Q + ++ R+L S + +F
Sbjct: 10 QSRTKGIVLVIFAAVLWGVSGTVAQYLFQKKFTPEWLVVIRLLLSGVILLCYA-FFKLKK 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +++FS + + A+ + +++ VI +VF
Sbjct: 69 DIWDIWKYRHHRFNLILFSIIGMLGVQYTYFAAIKYSNAATATILQYLSMVIITCYLAVF 128
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVG 191
LK+ Q +A +L I+ + H + L ++ ++ + + +
Sbjct: 129 LKKIPGLRQAVAIILAIVGTFFIITHGNVHALSISKLGLFWGLSSAFALAFYTLQPCSLL 188
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + + + + + F +
Sbjct: 189 SKWDSVVVVGWGMLIGGLTFSLFYHPWDFTGQWSGASISGVIFVVIFGTLIPFWCYMEST 248
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
K S ++ PL + SV L + I ++ +V+
Sbjct: 249 NHIKPSETNVLACVEPLSSVFLSVLWLHISFGIMEWIGAICIITTVVILSGEK 301
>gi|70728975|ref|YP_258709.1| hypothetical protein PFL_1583 [Pseudomonas fluorescens Pf-5]
gi|68343274|gb|AAY90880.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
Length = 303
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 96/300 (32%), Gaps = 8/300 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +++G+T ++ + L S ++ R +++ + S
Sbjct: 6 KMTPRTALGALHIGALMFGLTGVFGK-LAAASPAVIVFGRAAFAVLALGVFARLA----S 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ S +LA HW F A+ + + + P +V L +
Sbjct: 61 NTPWQKLAATDWRRLLLSGLLLAGHWVSFFVAVKVAGVAIATLGFASFPAFTVILEGLIF 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ER+ +++ LL+ + L+++T L AV SS
Sbjct: 121 RERIRFNEMLLVLLVSIGLVLVTPDFDLASQATTGLLWAVGSGLLFSLLSLNNRASSGRI 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + + + E + + + +F + K
Sbjct: 181 PAVQAALCQNVVVALCLLPVAAPELGQVRAMDWLWISLLGIFCTGLAHSLFVASLAVIKA 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
T ++ P+ I + + + ++++A+VV + + K T ++
Sbjct: 241 RTAAVVFALEPVYGITVAWLLFGENPTLRMLFGGALIIVAIVVSSRLSAGSGSKAATAEA 300
>gi|34497986|ref|NP_902201.1| transmembrane protein [Chromobacterium violaceum ATCC 12472]
gi|34103841|gb|AAQ60202.1| probable transmembrane protein [Chromobacterium violaceum ATCC
12472]
Length = 319
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/303 (12%), Positives = 85/303 (28%), Gaps = 17/303 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ A + + ++W + + L ++ + R +L V +
Sbjct: 5 TAMPAIHSQRNAYILLVLTMLMWSTNFIIARALHAELGPFTLAFARWGIALACVLPFAL- 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + +LV + + F AL T TPV+ +
Sbjct: 64 ---PRLRRNWSQLRAQWPLLLVLGLFGIGLTNTFVYRALQTTTATNAVILNSATPVMVLL 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAY 181
LGS++ ++RL+ Q + L + L++ G +
Sbjct: 121 LGSLYFRQRLSSRQWMGMTLALCGALLIVLKGKLLEIGGFHFGGGDLFVLAGGLSWAIYT 180
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
RK P + ++ L S L L L +
Sbjct: 181 LGLRKLKPGIDPMVQMAALLLVGEAVLLPFFLGELSSRGLPSLDAGAAASLLYLGALPSV 240
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +++ I + Y P + S+++L + + + + +
Sbjct: 241 VAYLLYNRAIAMVGTAKAAAFLYLMPAFGAMQSIWLLGEELHWYHVAGLAAIFGGIALSS 300
Query: 302 LPT 304
L
Sbjct: 301 LSR 303
>gi|73670023|ref|YP_306038.1| integral membrane protein [Methanosarcina barkeri str. Fusaro]
gi|72397185|gb|AAZ71458.1| integral membrane protein [Methanosarcina barkeri str. Fusaro]
Length = 308
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 90/282 (31%), Gaps = 14/282 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A +++G + ++ +++ ++ V+ +++L+ L + + + +
Sbjct: 12 IIAASVIYGFSGIFFMYVKNMAAGTVVFYQLLFGLLALVGYLAVTGKLSGIRLRGKRKTL 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ + + +++ + ++ + P + L +FLKE+LN
Sbjct: 72 ILLGALNAGVMVSYYMAVSF-----INVSISVLLLYTAPFYVLLLAPLFLKEKLNKKNFF 126
Query: 150 AALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
A +L + ++++ + V + +S E L
Sbjct: 127 ALILSLAGVVMVIGPENFVYGSGIEPAYLFGVLMGLFSGFFYACVTITSRYLRNEYSGLE 186
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTL----FLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ V L + S ++ G+ K
Sbjct: 187 QLFISTFVTLLLLLPFVKQASVTALIENLPVLLFLGVTITSVGSILYFTGLLHVKAQNAS 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I+ P+ I + +LK PI + +++ + + L
Sbjct: 247 ILSLLEPVSAIFFAYLLLKDPISAETLLGCVLILSSSFLASL 288
>gi|57641680|ref|YP_184158.1| DMT family permease [Thermococcus kodakarensis KOD1]
gi|57160004|dbj|BAD85934.1| permease, drug/metabolite transporter (DMT) superfamily
[Thermococcus kodakarensis KOD1]
Length = 275
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/274 (9%), Positives = 78/274 (28%), Gaps = 13/274 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + WG T + L + +++R + +
Sbjct: 6 LALLGVTVFWGFTFPAMKVSLNYFPPILFLAYRFGLASLLMLLI----------FGRRAL 55
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ L GF I L ++F + V++ F+ L E++
Sbjct: 56 KRETFKEGFILGLTLFFGHGFQIVGLKYTTASNSAFITSLYVVLTPFIAYFMLGEKVTGR 115
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIA--VTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + +L ++ L +++ + S G + + L
Sbjct: 116 DLTSLVLAVIGLYLISGAGTSINYGDFLTLLCAVSFAFQIVLVHKFGEKDYLSLTFWQLF 175
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+F ++ F +P + F + + ++
Sbjct: 176 WNFIFSALFALAFEEPAFPREVLPWVGVIYTAVFATVIAFTVQLKYQRYTTAQRAALIYS 235
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ +++ L + + + +++ ++
Sbjct: 236 SEPVFGSLAAYIALGETLSLRGYLGAALIMSGIL 269
>gi|299139987|ref|ZP_07033157.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX8]
gi|298597987|gb|EFI54155.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX8]
Length = 303
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 98/293 (33%), Gaps = 20/293 (6%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G A WG + + L +++V ++ +R L++ G+ ++ GL
Sbjct: 7 NRSLGFAACALASTFWGCGFFFGKIALAEMNVGSMVLYRFLFATLGLLPLLLTHRPGL-- 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L+ + + + + L S PVI +F+
Sbjct: 65 -----NSTEWRTLLICTFLGVPMQFLVQFRGLSLTTVSHASLMVGTLPVILAVGAVLFMH 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTI 188
ER+ L +A +L ++ L G L+ ++ ++ + +
Sbjct: 120 ERMQKLGWVALVLSTAGAALIALGGHHSTETGGPSLNGDLLVVASMVISLFWILLNKGLV 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L L V + + L + +++
Sbjct: 180 KRHSPIMITAYGLALGTTMLALYVPLAYGPPPVHGVSLKAWAALAASGLLCTATTSLLWN 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+G+ + S G++ PL+ + VF+L + + + +++ A +V
Sbjct: 240 WGMTQVPASQAGVLLNMEPLMGSLLGVFLLHEHLGPSAFVGGAMIIGAAIVLT 292
>gi|295401325|ref|ZP_06811296.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976540|gb|EFG52147.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
Length = 302
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 101/296 (34%), Gaps = 11/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S + L +F + + + + + +R+ +++ + V
Sbjct: 2 KSSNLLKPYLALFIGALSVSTSAILVKA-AHAPASIIAFYRLFFTVLFMTPFFVKVKYIQ 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + ++ + S +LA H+ F+ +L + + P+ + G VF
Sbjct: 61 ELQMISKRDWVFSIL---SGALLAFHFIFWFESLNFTSVASSVVLVTLQPLFAFIGGYVF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARK---TIPVG 191
KE+L +++ALL I+ +I++ SG L A+A+
Sbjct: 118 FKEKLTVGAVLSALLAIVGCVIISWGDFQVSGKALFGDALALFACVMVTGYWLLGQALRK 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
V I L +++ F I FL+ + + ++ +
Sbjct: 178 RLSLMTYTYIVYGISTLTLLLYVLVLRFPLFSYRKIDWICFLLLAIVPTLLGHSLMNWSV 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
K +TV + P+ ++ + +L + + + I ++ + YL
Sbjct: 238 KWVSAATVSMSILFEPVGAVILAYLLLGEVVQPSQLIGGIFILTGIGTYLWGENRK 293
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 37/120 (30%)
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + + D +F I G L +F F +
Sbjct: 31 HAPASIIAFYRLFFTVLFMTPFFVKVKYIQELQMISKRDWVFSILSGALLAFHFIFWFES 90
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ +++ ++ PL + K+ + + + ++ V+ SGK
Sbjct: 91 LNFTSVASSVVLVTLQPLFAFIGGYVFFKEKLTVGAVLSALLAIVGCVIISWGDFQVSGK 150
>gi|30260738|ref|NP_843115.1| EamA family protein [Bacillus anthracis str. Ames]
gi|47525856|ref|YP_017205.1| eama family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49183576|ref|YP_026828.1| EamA family protein [Bacillus anthracis str. Sterne]
gi|165871795|ref|ZP_02216439.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167635660|ref|ZP_02393971.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|167640651|ref|ZP_02398912.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|170688482|ref|ZP_02879689.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|170708248|ref|ZP_02898694.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|177653796|ref|ZP_02935897.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190568171|ref|ZP_03021080.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227816548|ref|YP_002816557.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|229601651|ref|YP_002865183.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|254684341|ref|ZP_05148201.1| transporter, EamA family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254722143|ref|ZP_05183932.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
gi|254738805|ref|ZP_05196508.1| transporter, EamA family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254743809|ref|ZP_05201493.1| transporter, EamA family protein [Bacillus anthracis str. Kruger B]
gi|254755029|ref|ZP_05207063.1| transporter, EamA family protein [Bacillus anthracis str. Vollum]
gi|254762237|ref|ZP_05214081.1| transporter, EamA family protein [Bacillus anthracis str. Australia
94]
gi|30254187|gb|AAP24601.1| transporter, EamA family [Bacillus anthracis str. Ames]
gi|47501004|gb|AAT29680.1| transporter, EamA family [Bacillus anthracis str. 'Ames Ancestor']
gi|49177503|gb|AAT52879.1| transporter, EamA family [Bacillus anthracis str. Sterne]
gi|164712520|gb|EDR18053.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167511366|gb|EDR86751.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|167528919|gb|EDR91675.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|170126904|gb|EDS95785.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|170667507|gb|EDT18263.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|172081188|gb|EDT66264.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190560663|gb|EDV14639.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227005984|gb|ACP15727.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|229266059|gb|ACQ47696.1| transporter, EamA family [Bacillus anthracis str. A0248]
Length = 308
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKSPAPIQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQ 296
>gi|15889719|ref|NP_355400.1| hypothetical protein Atu2448 [Agrobacterium tumefaciens str. C58]
gi|15157631|gb|AAK88185.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 302
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 94/298 (31%), Gaps = 17/298 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ K N S+P+ L + A + WG + + + +S + R + ++ +F V
Sbjct: 1 MKKRNISVPS-KAYLALIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLAVAIIFAISV 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + V + F AL + P++
Sbjct: 60 ----PQLIKDWPVVKQRLPYFFVLGSVGYTAFNVFLYTALQHTSAINAAVIQAGIPMVIF 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAY 181
L V + R+ QI L I + ++ H + L + ++ Y
Sbjct: 116 VLNFVLFRTRVLFGQIAGFCLTISGVALLASHGDPLSLLQLEMNVGDAVMLLAVLVYAIY 175
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ P A+ +V+ S + L + +
Sbjct: 176 TVILRWKPAVDWRTLMAIPAFFALLTSVPLVFFEMSRESLIWPDQKGWMLVVYAGIFASL 235
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ G+++ + G+ P+ + SVF+L + + T + + + + V
Sbjct: 236 IAQILYIKGVEQIGANRAGLFINLVPVFGTLLSVFVLSETLHTYQIAALFMALAGIAV 293
>gi|20092300|ref|NP_618375.1| integral membrane protein [Methanosarcina acetivorans C2A]
gi|19917542|gb|AAM06855.1| integral membrane protein [Methanosarcina acetivorans C2A]
Length = 296
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 96/283 (33%), Gaps = 10/283 (3%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
V A +++G ++ +++ ++ V+ ++L+ + + + L+ +
Sbjct: 12 VIAASVIYGFAGIFFLYIKNMAAGPVVFCQLLFGFLVLAAYLATAGKFSGSSRIRLRGKR 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+L A + A+ ++ + P + + V LKE+++ ++
Sbjct: 72 KAILL--LGAWQAGVMLSYYTAVNFTNVSMSVLLLYTVPFYVLLIAPVILKEKISTKNLV 129
Query: 150 AALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
A L ++ ++++ L + + + + + +
Sbjct: 130 ALTLSLIGVVVVVGPANLVFGTAGSGYLYGVLMGLFSGFFYACIIMTSRYLRDEYSGLEQ 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + V+ F + L ++ SF ++ G++ K I
Sbjct: 190 LFLSTGVTLVILLPFMLQISSTALLENLPVLLFLGVMITSFGSILYFTGLEHVKAQNASI 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ P+ I + IL P+ +++ + ++ L +
Sbjct: 250 ISLLEPVSAIFFAYLILNDPVSQATLFGCILILASSLLMSLES 292
>gi|310816518|ref|YP_003964482.1| S-adenosylmethionine uptake transporter [Ketogulonicigenium vulgare
Y25]
gi|308755253|gb|ADO43182.1| S-adenosylmethionine uptake transporter [Ketogulonicigenium vulgare
Y25]
Length = 295
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 79/284 (27%), Gaps = 3/284 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++ G +V L + + ++++ R L L V ++
Sbjct: 10 QTSAAEMRQGMTWVLLDMALVSAMTVMVKKGGVDFPAVQMVFFRSLVGLVAVLPLVLRHW 69
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ ++ +N V + + A GFL V + L
Sbjct: 70 RVIRQTRNVKRNVFRVTCNAVALSCNWGALTILPLATANAIGFLRPLIVMVMAIFL--LS 127
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
R + + ++ L +T L A A F +
Sbjct: 128 ERVTGWRWAGAALGLMGVGVMLLPSLTGMGEAQDHLLGYAFAGGAILFGAMATIQTRALK 187
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + ++ + + L+G G++ + G + A
Sbjct: 188 GENTTVMMVFYTVGLTLFTAIPAFFVWQPVALHHLPHLLGIGIIAQVAQYCYLRGYQLAP 247
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + + Y + + V + +++I ++V
Sbjct: 248 ASKLAPLGYLSLIFATVMGYVFFDEVPTVYTAGGAIVIIIGLIV 291
Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 32/68 (47%)
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
N+ + L+T + + PL+++V ++F+L + + R + ++ +
Sbjct: 86 TCNAVALSCNWGALTILPLATANAIGFLRPLIVMVMAIFLLSERVTGWRWAGAALGLMGV 145
Query: 298 VVYLLPTV 305
V LLP++
Sbjct: 146 GVMLLPSL 153
>gi|298717350|ref|YP_003729992.1| DMT superfamily transporter [Pantoea vagans C9-1]
gi|298361539|gb|ADI78320.1| Putative DMT superfamily transporter [Pantoea vagans C9-1]
Length = 353
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 102/304 (33%), Gaps = 15/304 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G A + + + L+ + V EVI R + +L + + + L
Sbjct: 51 MNASAGIAMKITAALSSTLMLACVKGLDGAIPVGEVIFFRSVLALVPLLIWLRFQGSVLE 110
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ V F +LL + + P+ +V L ++ L
Sbjct: 111 GIRTRNIRGHFVR-----GLAGTGGLYFSYLSLLYISLTDATAINYAAPLFTVLLAALLL 165
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
+E++ H + +A +L+M + + + +A+C A + +
Sbjct: 166 REKVRHHRWVAVFTGFSGILVMFSGHLSLTQSASFSLSASAGILLALMAAFCTACALVQI 225
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + A+ + + + + + + LIG GLL + +
Sbjct: 226 RFLNGKEKPGAIAFWFAVTTALTSLITLPGGWKVPHGNQVALLIGCGLLGGITQILMTLS 285
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ A+ S + +YT + + +L T I +VV + LL K
Sbjct: 286 LRYAEASLLAPFDYTTLIWSVAVGYLLLGNLPTTTTVIGAVLVVCGGLYSLLYERYRFRK 345
Query: 311 NKTK 314
++
Sbjct: 346 SRLA 349
>gi|282852849|ref|ZP_06262190.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|282555957|gb|EFB61578.1| putative membrane protein [Lactobacillus gasseri 224-1]
Length = 329
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 100/307 (32%), Gaps = 16/307 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + T+ A ++WGI+ L+ + +++ + + R++ S +
Sbjct: 6 TRSRLWTILAALAAVMWGISGLFAESLFKISSKITPIWLTQIRLIISGVVLLIIAAIL-- 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ + L F+ + + + F+ P + +
Sbjct: 64 HQKPFSILKNKKNTLHIIAYGVFGLLPVQIFYFIVIEMANASIATILQFIGPFFVLAYLA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTI 188
V ++ L L ++AA++ + + +++ H + ++ A
Sbjct: 124 VTHQQVLRKLDVLAAIMAFIGVFLLSTHGNLNHLAITPVALFFGLLSALGEASYTLIPVK 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V + + L V+ + + L F I +
Sbjct: 184 IVKRISSLVLTGWGMIFAGLGLVIVHPSFPAIPN--TSKVWLWVGAIIILGTIVPFQIMA 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K STV +++ PL V SV I + + + +V++A++
Sbjct: 242 NALRYVKPSTVSLLDAFEPLSATVGSVLIFGLVMSGMDWLGTFLVIVAVLALNFTPKRKI 301
Query: 309 GKNKTKK 315
K ++
Sbjct: 302 KKFLKRE 308
>gi|259415796|ref|ZP_05739716.1| possible transporter, RhaT family, DMT superfamily [Silicibacter
sp. TrichCH4B]
gi|259347235|gb|EEW59012.1| possible transporter, RhaT family, DMT superfamily [Silicibacter
sp. TrichCH4B]
Length = 293
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P G L + + + I + + + V + ++++ R + + +
Sbjct: 6 SPNQKGALLMLGSMAFFTINDTLVKLVGETVPLWQIVTVRGVMASVLLLCLARAMGALRF 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L A L L VT ++FLG
Sbjct: 66 DLSRRDWGLVLARCATEMAVTYFFLSALLQMPLANITAVLQMLPLTVTLCAALFLGE--- 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + +A L + +L++ G I + + +
Sbjct: 123 --TVGWRRSLAIALGFVGMLLIVRPGGADFGPATIYALLAVALLTLRDLVTRQMSPAVPS 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V + A +++ G + + L L +L + I+ ++S
Sbjct: 181 LTVTFLSAFSVMLFGLGLGLGESWQPVGGREWLLLSATAVLILLAYLCAVMTIRVGEVSA 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
V + YT + ++ + + + + GIVV A + LL
Sbjct: 241 VAPLRYTGLVWALLLGWLVFGEFPSGLTLLGAGIVVAAGLFTLLRER 287
>gi|312109771|ref|YP_003988087.1| hypothetical protein GY4MC1_0648 [Geobacillus sp. Y4.1MC1]
gi|311214872|gb|ADP73476.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y4.1MC1]
Length = 302
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 102/296 (34%), Gaps = 11/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S + L +F + + + + + +R+ +++ + V
Sbjct: 2 KSSNLLKPYLALFIGALSVSTSAILVKA-AHAPASIIAFYRLFFTVLFMTPFFVKVKYIQ 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + ++ + S +LA H+ F+ +L + + P+ + G VF
Sbjct: 61 ELQMISKRDWVFSIL---SGALLAFHFIFWFESLNFTSVASSVVLVTLQPLFAFIGGYVF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARK---TIPVG 191
LKE+L +++ALL I+ +I++ SG L A+A+
Sbjct: 118 LKEKLTVGAVLSALLAIVGCVIISWGDFQVSGKALFGDALALFACVMVTGYWLLGQALRK 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
V I L +++ F I FL+ + + ++ +
Sbjct: 178 RLSLMTYTYIVYGISTLTLLLYVLVLRFPLFSYRKIDWICFLLLAIVPTLLGHSLMNWSV 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
K +TV + P+ ++ + +L + + + I ++ + YL
Sbjct: 238 KWVSAATVSMSILFEPVGAVILAYLLLGEVVQPSQLIGGIFILTGIGTYLWGENRK 293
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 38/120 (31%)
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + + D +F I G L +F F +
Sbjct: 31 HAPASIIAFYRLFFTVLFMTPFFVKVKYIQELQMISKRDWVFSILSGALLAFHFIFWFES 90
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ +++ ++ PL + LK+ + + + ++ V+ SGK
Sbjct: 91 LNFTSVASSVVLVTLQPLFAFIGGYVFLKEKLTVGAVLSALLAIVGCVIISWGDFQVSGK 150
>gi|228988945|ref|ZP_04148990.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228770785|gb|EEM19305.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 310
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 99/285 (34%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLL----FSFKQLKRSVAH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVPWKRMNLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L +L++T+ S +++ A ++ +
Sbjct: 124 NYWIGIVLGAAGVLLITIPSSNVDQEVSLIGDTLILLSTFLFAFYTVLLKRPKQEQYLSK 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFATVETFYYGFPKVETWKAGLSIIYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 244 SVSASVSGLYLNALPLISIVASIVLLDEALTWKIVIGGSLVLIGV 288
Score = 42.2 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLLFSFKQLKRS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VAHKQVPWKRMNLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + +++ +P+
Sbjct: 121 IQLNYWIGIVLGAAGVLLITIPS 143
>gi|218779107|ref|YP_002430425.1| hypothetical protein Dalk_1254 [Desulfatibacillum alkenivorans
AK-01]
gi|218760491|gb|ACL02957.1| protein of unknown function DUF6 transmembrane [Desulfatibacillum
alkenivorans AK-01]
Length = 304
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 100/297 (33%), Gaps = 6/297 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+L + L + A ++WG T ++ + ++ + + R + + S
Sbjct: 1 MNLKVLKANLILLTAALVWGSTFVFQRSAMQNMDPVSFSGLRFALGALCLAPIAYFRSKR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L + + +V + T++ F L+ F + ++ LG +
Sbjct: 61 PTLPLPGVPRWLPLLGMVVAGTVMCFGINFQQVGLVETTAGKAGFITGLYVIMVPILG-L 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----IPVGSS 193
K++ + +A L + + ++++ L V A+ +A
Sbjct: 120 AFKQKPDLGLWLALPLAVTGMYLLSVTDAFNLAPGDGLVLICAFMWAVHVLVVGYFSPRM 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ F + + A+ +++ + L G + F + G K
Sbjct: 180 DSFVLGFGQAFVCAVLSLIYALCCETITWEGVWASRYALLYGGIGSVAIGFTLQIIGQKD 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + I+ + VS L + + T I G+++ M+V L + K
Sbjct: 240 SPAAHAAIILQLEAVTAAVSGWLFLGESMTTRSFIGAGLMLAGMLVAQLWVFVPKRK 296
>gi|150398575|ref|YP_001329042.1| hypothetical protein Smed_3386 [Sinorhizobium medicae WSM419]
gi|150030090|gb|ABR62207.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 295
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 3/291 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P G +F A +++ + ++ L + ++ W+ G + + G
Sbjct: 2 TPKANGYVFTLLAIVIFAMQDGISKHLAALYPPVFVAMIRYWAFAGFAAVLAARAPGGFA 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K P + +L V I + + TP+ L L
Sbjct: 62 ATMVTKKPLIQLLR---GVLLPVQIVLVITSFTIVGLAQSQAILAATPLFVALLSMPLLG 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ + A + +L +L++ + +A FA I + +
Sbjct: 119 ERVGWRRWSAISVGLLGVLLILRPEDGSFNVNFLLPLAAAVMFAFYVITTRLASRGDSAV 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ G + + D ++++ + + + V
Sbjct: 179 TSFFYTGVVGAFAITLVGPFFWATLSGTDWVWMVLLCITGTSSHYFLIRAYDMLDAAAVQ 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y + V V I + + T +VV A + + + S +
Sbjct: 239 PLTYLQLVFASVMGVTIFGETLTTNMVFGSVLVVAAGIFTIWREHVVSRRK 289
>gi|49476769|ref|YP_034608.1| DMT family permease [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328325|gb|AAT58971.1| permease, drug/metabolite transporter (DMT) superfamily [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 310
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 101/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A +LWG T++ LE + ++ R+L++ FS
Sbjct: 8 ICMLLVAVVLWGTAIAPTKWALESIQPFTLLFIRLLFAGGICLL----FSFKQLKRSVEH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I L + +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIALGGVGVLLITIPSSNVDQEVSLIGDILILLSTFLFAFYTILLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMAETFYYGFPEIETWKTGFSVMYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+ +
Sbjct: 244 TVSASVSGLYLNALPLISIVASIVLLDESVTWKIVIGGSLVLTGV 288
Score = 40.3 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ +P
Sbjct: 8 ICMLLVAVVLWGTAIAPTKWALESIQPFTLLFIRLLFAGGICLLFSFKQLKRSVEHKQVP 67
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I I
Sbjct: 68 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQLNYWI 127
Query: 289 VFGIVVIAMVVYLLPT 304
+ + +++ +P+
Sbjct: 128 GIALGGVGVLLITIPS 143
>gi|330810321|ref|YP_004354783.1| hypothetical protein PSEBR_a3454 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378429|gb|AEA69779.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 305
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/273 (10%), Positives = 83/273 (30%), Gaps = 1/273 (0%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + W +P+ + L+ ++ R L + + + L+D
Sbjct: 20 ILATLLVIVCWAYSPIGIRIGLQAYEPGQLALVRFLIASVFMALVAMVKGISWPRLRDLP 79
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
V I + + A ++ + VF V +
Sbjct: 80 LLAVLGFFAVSLHHIALNYGQRGVSAGAASVLAQSTPLFSTLLAHFVFKDRVSGWQWGCV 139
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L + ++++ L + +A + FA + +G + +
Sbjct: 140 LCGLLGAGVVVAGDRGLGDMDAHGLLILLAALSWSLYFALQKRHAHRYDGLTVVCYTVWS 199
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ ++ + L+ ++ + ++Y + + +S + Y
Sbjct: 200 GTILLCIFAPGMLSAARQASASVNLAVLVLGIFPSALAYLAWAYVLAHSNVSRASMALYL 259
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
P ++ + +L + + + IV+++++
Sbjct: 260 IPPTAMLMASLVLAERPSAMVIVGAVIVLVSVL 292
>gi|323336021|gb|EGA77296.1| YMR253C-like protein [Saccharomyces cerevisiae Vin13]
Length = 414
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 97/312 (31%), Gaps = 37/312 (11%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS----------VLEVISHRVLWSLPGVFFAIVYF 74
+G + + +Y + T+ LE L+++ R++ + G +
Sbjct: 69 IGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYIN 128
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+S + P+ LV Y+L+ F+ P +++FL
Sbjct: 129 KSTISDVP--FGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFL 186
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------------------- 172
V L ER ++ + +L+ +L ++++ S +
Sbjct: 187 SWVILXERFTKVEALGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRLIATL 246
Query: 173 ---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ S + I + + L + ++ N + +
Sbjct: 247 VGLWGVLGMSCVYIIIRYIGKRAHAIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQ 306
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + + GI+R + +M YT L + V + K + I
Sbjct: 307 WILFGNLGVSGFIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIG 366
Query: 290 FGIVVIAMVVYL 301
I++ A +
Sbjct: 367 MIIIISATLWVT 378
Score = 46.4 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 47/152 (30%)
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ L+++T+ + + V+ ++
Sbjct: 68 NIGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYI 127
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S G +L+ G F Y + +S ++ + AP L I S
Sbjct: 128 NKSTISDVPFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLS 187
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
IL + V + I ++ +V+ + P+ +
Sbjct: 188 WVILXERFTKVEALGSLISLLGVVLIVRPSFL 219
>gi|296313545|ref|ZP_06863486.1| integral membrane protein [Neisseria polysaccharea ATCC 43768]
gi|296839885|gb|EFH23823.1| integral membrane protein [Neisseria polysaccharea ATCC 43768]
Length = 284
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/282 (10%), Positives = 81/282 (28%), Gaps = 17/282 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + ++ + ++ R+L + A +
Sbjct: 1 MFYQILALIIWSSSFIAAKYAYGGIDPALMVGARLLIAALPALPAC-------RRHIGKI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ + + L S + P++ VF+G F ++
Sbjct: 54 PREEWKPLLIAAFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLMMVFIGHFFFNDKAET 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 114 HHWICGAAAFAGIALLMAGGAEAGGEIDWFGCLLVLLAGAGFCAAMRPTQRLVARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + A + + L + +++ G+ R
Sbjct: 174 VTSVSIAASSLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWCAYWLWNKGMSRVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G++ P++ ++ +V IL + + V + IV+ A +
Sbjct: 234 NVSGLLISLEPVVGVLLAVLILGEHLSPVSILGVSIVIAATL 275
>gi|153217122|ref|ZP_01950886.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124113842|gb|EAY32662.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 341
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 45 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 100
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 101 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 160
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 161 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 220
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 221 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSFSLIAYAGIAASLLAPWMWVKAIDAIGAD 280
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 281 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRN 331
>gi|33240206|ref|NP_875148.1| DMT family permease [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237733|gb|AAP99800.1| Permease of the drug/metabolite transporter, DMT superfamily
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 295
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 88/293 (30%), Gaps = 15/293 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
N G + + + + + + + + L + V E++ R ++S + +
Sbjct: 7 NKQKKYTHGFITLVGSALAFSLMTVCIKHLRGRIPVAELVFFRSVFS--------LLTTR 58
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +L+ I A+ + + + P FL
Sbjct: 59 LMMRNAGVYPWGINKRLLIARGLIGTSALFCVFKAIDSLPLGAATIIQYTYPTFIAFLAW 118
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV------TWSAYCFARKTIPV 190
+ L E L +A +L L + + +A A A + V
Sbjct: 119 LILNEELRKRIFLAIILGWLGVQAVVHTLWENSSHQQLAFPSVIVALSGAMLTALAYVIV 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ ++ L + L + +LIG G+ + + G
Sbjct: 179 RKLSKQEHQLVIVFYFPLVSIPITLPFLIHQSVLPIGTEWAWLIGIGIFTQLGQLLITNG 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ G + YT + + I +P+ + V++A ++ L
Sbjct: 239 LSLLPAGYAGSISYTQVIFATLWGWLIFSEPLTFYILVGATCVLLATLISLSD 291
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 44/140 (31%)
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
+ + I + SA F+ T+ + G ++ ++F ++
Sbjct: 1 MNWTLWNKQKKYTHGFITLVGSALAFSLMTVCIKHLRGRIPVAELVFFRSVFSLLTTRLM 60
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ LI GL+ + I L I++YT P + + I
Sbjct: 61 MRNAGVYPWGINKRLLIARGLIGTSALFCVFKAIDSLPLGAATIIQYTYPTFIAFLAWLI 120
Query: 278 LKQPIDTVRTIVFGIVVIAM 297
L + + + + + +
Sbjct: 121 LNEELRKRIFLAIILGWLGV 140
>gi|294811432|ref|ZP_06770075.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|326439997|ref|ZP_08214731.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|294324031|gb|EFG05674.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
Length = 340
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/316 (9%), Positives = 81/316 (25%), Gaps = 25/316 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L + A I WG + + L + R +L + + + +
Sbjct: 24 RGLLCLVVAGIAWGTAGAAASLVFRASDLGPLSLSFWRCAGALLLLLPVLALRARRSRAV 83
Query: 82 KDTL------------KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ + ++ + L V G + A+ + +
Sbjct: 84 AGSAALGGAGAPAAAGSRRRRTVRMLGTGIGLTVFQGGYFAAVEATGLAVATVVTLGAGP 143
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWS 179
+ + LG+ + A+ L L + + G +
Sbjct: 144 LLIALGARLTLGERLGAGGVFAVGGALCGLTVLVLGGEGGTVRPAGIASALLSATGYAVT 203
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
R G+ + L +
Sbjct: 204 TLLARRPGPRGGADPLVTTVWSFVIGAVAMLPPALAEGLLPGSGDTVRVVLLLAYVAAVP 263
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ G R + +TV ++ P+ V +V +L + + + +++ A+
Sbjct: 264 TALAYVLYFAGAARVRAATVSVVMLLEPVSAAVIAVTLLGERLTPATVLGTALLLTAVTG 323
Query: 300 YLLPTVINSGKNKTKK 315
+ + +
Sbjct: 324 LAWAETAPGRRTRAAR 339
>gi|255010501|ref|ZP_05282627.1| hypothetical protein Bfra3_15289 [Bacteroides fragilis 3_1_12]
Length = 310
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 96/293 (32%), Gaps = 15/293 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + A +G+ PL+T L E +SV V+ +R +++ + +
Sbjct: 4 NSKAKGFVCGAVAAATYGMNPLFTLPLYKEGMSVDSVLFYRYGFAVLILGILMKVQGQSF 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L ++ + A + + + + S FV PV+ + +F
Sbjct: 64 ALKRNEILPLVA------GGLLFSASSLLLFLSYKHMDAGIASTILFVYPVMVALIMFLF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
E+++ L + LL + + ++ G LL + +++++ Y +
Sbjct: 118 FHEKVSLLTVFCILLALSGIGLLYKGEGGETLSLVGMLLVILSSLSYAVYIVGVNHSTLK 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ L Y+V F L L + I
Sbjct: 178 LMSTAKLTFYALLFGLSIYIVRLNFCADLQAVPSFPAWGNILAMAFLPTVISLVCTAVSI 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ P+ + V I + + + ++++A++ ++
Sbjct: 238 HSIGSTPTAILGALEPVTALFFGVMIFGERLTPRLMLGILMILVAVMFIVVDK 290
>gi|119478219|ref|ZP_01618275.1| hypothetical protein GP2143_06754 [marine gamma proteobacterium
HTCC2143]
gi|119448728|gb|EAW29972.1| hypothetical protein GP2143_06754 [marine gamma proteobacterium
HTCC2143]
Length = 271
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 93/271 (34%), Gaps = 7/271 (2%)
Query: 30 VFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A L + + L S +++ R L++LP V Y G S++ +
Sbjct: 1 MLFAMFLGACIDVAVKALASDYSTSQIVLLRTLFALPLVLLFCYYQGGLQSIISPRWR-- 58
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
++ + A F Y L +++PVI V L LKER+ ++
Sbjct: 59 ----WQLYRGLLTAGLNFGFFYGLAYIPLVTAVLLAYISPVIIVLLSYFVLKERVGSQRL 114
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
I L +L ++ + + +++ S+ C+A +I G +
Sbjct: 115 IGCALGVLGVVFVLRPGTMEWHPAMLSILGSSVCWALLSISNRQLAGLESTAALTFHTLP 174
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ H+ D L G+ + + K A+ +T+ +EY+ +
Sbjct: 175 ISGLLAAILTAGHWVEPQHADWLLFAIVGISAGGLHFFVALAYKSARAATIAPLEYSNLI 234
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ ++ I ++ +
Sbjct: 235 FTGAAAYLFWQEVPTIATMIGGLAILAGGFL 265
Score = 40.3 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ + GLL + + F YG+ L T ++ Y +P+++++ S F+LK+ + + R I
Sbjct: 57 WRWQLYRGLLTAGLNFGFFYGLAYIPLVTAVLLAYISPVIIVLLSYFVLKERVGSQRLIG 116
Query: 290 FGIVVIAMVVYLLPT 304
+ V+ +V L P
Sbjct: 117 CALGVLGVVFVLRPG 131
>gi|320102562|ref|YP_004178153.1| hypothetical protein Isop_1015 [Isosphaera pallida ATCC 43644]
gi|319749844|gb|ADV61604.1| protein of unknown function DUF6 transmembrane [Isosphaera pallida
ATCC 43644]
Length = 398
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 98/305 (32%), Gaps = 18/305 (5%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFF 69
+ + ++S T L + IL T + L V+ + + G+
Sbjct: 93 ANSAATVSSSSFRTRETWLILLGMAILGSTTAPAAKLAVAEIPLTVLPV-IRFGAAGLLL 151
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ ++ L+ + P +A + ++ FF+ F Y P
Sbjct: 152 LVWFWPRRRELIALLSERPGRAWAT--AAFCVPINQAFFLSGTKLAPTSHVGFLYATCPA 209
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS---------------GIPLLSLAI 174
+ + L + ERL +++ L+ +L + I+T + L+ +
Sbjct: 210 VVLVLAWLLGMERLKPVRVAGILVTVLGMAIITWGGLKDVSSAGLESLLVGDLLLMGAVV 269
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
+ C G+ + A+ L + + + + +
Sbjct: 270 SWAAYMLCSKSLIESHGAFPTLISTFLLGALLCLPFTLAASWDTQMLRAVSWTAWAGMIH 329
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
++ + + I+R + S V + AP+L ++ +V + I + +
Sbjct: 330 LTVVVTVVGLALQNLAIRRLETSQVAAVGNLAPILTLIWAVLLFGDAITPQLIVGGTATL 389
Query: 295 IAMVV 299
+ + +
Sbjct: 390 VGVFL 394
Score = 39.5 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 35/114 (30%)
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + L +VW E L + F G K
Sbjct: 134 IPLTVLPVIRFGAAGLLLLVWFWPRRRELIALLSERPGRAWATAAFCVPINQAFFLSGTK 193
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
A S VG + T P +++V + + + + VR + V+ M + +
Sbjct: 194 LAPTSHVGFLYATCPAVVLVLAWLLGMERLKPVRVAGILVTVLGMAIITWGGLK 247
>gi|330967333|gb|EGH67593.1| hypothetical protein PSYAC_22310 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 295
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 85/287 (29%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F+ A L+ +++L + ++ + ++ +
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVW-----ARYLVHTLLMACIFMPS 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K G+ V A L F +L+ + F+ P++ L L
Sbjct: 67 AGLRVLRTKRPGLQVLRALALLGTSLLFTSSLMFIPQAEATAVNFLAPLLVTALSVPLLH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q IA ++ + ++I+ G + SA CFA + F
Sbjct: 127 ERVTRGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSPT 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LF + + + + FL+ G + + + A + +
Sbjct: 187 TSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAMLA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ + N
Sbjct: 247 PFSYCQIVFAGLLGFLVFDHMPSHTAQAGIAIICLSGLAAAWQQRRN 293
>gi|288957189|ref|YP_003447530.1| hypothetical protein AZL_003480 [Azospirillum sp. B510]
gi|288909497|dbj|BAI70986.1| hypothetical protein AZL_003480 [Azospirillum sp. B510]
Length = 305
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 88/289 (30%), Gaps = 16/289 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + W + + + V + + R W L + + L L
Sbjct: 20 LLMMMPPLFWAGNAVMGRAVAGAVPPVGLAFWR--WFLGMLIVLPFAWRHLRHDLTPMLA 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K+V +L + V AL + PV+ V + V ++R+ +
Sbjct: 78 RWKSVLLLATLG--IGVFNTLQYIALNSTTALNCVMLQSSMPVMIVLMSVVLFRDRVGAM 135
Query: 147 QIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
Q + ++ + + H L LA V ++AY + P
Sbjct: 136 QGLGIVVSLAGATTLISHGDPATLLGLELNSGDLWMLAAVVIYAAYTTLLRRRPAVHGLS 195
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F + + L GG + I + + F+ ++
Sbjct: 196 FVVVTFAIGALELLPFYIWESLGGHPMRVSGITLLAVGYTVLFPSIAAYLCFNRAVELLG 255
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+T G+ + P+ + ++ L + + I ++ +++
Sbjct: 256 PNTAGLAIHLVPVFGSLLAILFLGEQLHPYHGIGIALIAAGILLATRRR 304
>gi|255658386|ref|ZP_05403795.1| membrane protein [Mitsuokella multacida DSM 20544]
gi|260849719|gb|EEX69726.1| membrane protein [Mitsuokella multacida DSM 20544]
Length = 291
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 84/289 (29%), Gaps = 11/289 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +LWG + + Q++ Q + ++ R+L S + +
Sbjct: 2 RRRGIALALTGAVLWGGSGVAGQYILQDCAFATEWLVGVRMLISGALLLLIDLAVYRQ-D 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + F+ + + A+ + ++ PV+ V ++
Sbjct: 61 IFVVFRGRRDRLETIAFAIFGMLGVQYTYFAAIKFSNAATGTILQYLMPVVIVGWTALRT 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGS 192
+ ++ L +L ++ H P L + ++A + + +
Sbjct: 121 RRMPPLGELACVALAVLGTFLLVTHGSLTSLAISPPALFWGLLCAFAAAFYTVQPKRLIC 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + F F + ++
Sbjct: 181 KYRPTLIVGWGMLVGGLLFLPISNPWAFTGIWNTAAALNFAYIILFGTVIAFVCYLGSLQ 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + I+ PL I+ S+ +L + ++ A+++
Sbjct: 241 YIQPAETSILGSAEPLSSILLSIALLHITFTPADLLGAISILAAVILLT 289
>gi|218234298|ref|YP_002365379.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
B4264]
gi|218162255|gb|ACK62247.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
B4264]
Length = 308
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 99/294 (33%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENVVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + LI + + F ++
Sbjct: 183 ECGTTVVIGWGMLIGGIALLIYNRSFGWNHFSQTLTLKTFSMLILIIISGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 296
>gi|319784253|ref|YP_004143729.1| hypothetical protein Mesci_4570 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170141|gb|ADV13679.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 297
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/278 (10%), Positives = 73/278 (26%), Gaps = 1/278 (0%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ V + W + L LE+ + R + + L L + +
Sbjct: 20 IAVALTVVGWASAFPAIRAGLAAFGPLELGALRFAIAAVPAAIFLAVKRPALPRLDEAWR 79
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V T++ + A S + +++ + +
Sbjct: 80 LVFGGAIFVALYTVMLNFGELTVSAGAAGFIINVSPIFTAIMAMALLGERFSGVAWIGTV 139
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
A + II L L + + SA + I + +
Sbjct: 140 ISFAGIGIIAMADGHGLSFNTGALLVLGSALCSAVNTIVQKPLFARHHPLTISASNMVLG 199
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
AL + + + + + + + ++ + R + Y
Sbjct: 200 ALCLAPFLPSAFSQAAVADTAGLGAVIFLGIVPSLIAYAAWATALSRLPAARASNFLYLV 259
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + F L + + I + + ++V L
Sbjct: 260 SPMSALIGFFWLGEVPTLLGIIGGALALGGVIVVNLKR 297
>gi|270293006|ref|ZP_06199217.1| membrane protein [Streptococcus sp. M143]
gi|270278985|gb|EFA24831.1| membrane protein [Streptococcus sp. M143]
Length = 303
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 102/302 (33%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GTL+ A I WG++ Q+L +S L + + R++ + + F +
Sbjct: 2 SKTVKGTLYTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLIIAGLALVFLTYVTAKD- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 61 KLFAFLKDKKSLLSLLLFAVFGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ +II+ L I ++ H L + + + I +
Sbjct: 121 DRVAPTLAEIISIGLAIGGTFLIATHGKLDQLSVTPVGLFWGLFSALTYALYIILPIVLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + + + + F + F + F G
Sbjct: 181 KKWGSILVIGVGMVISGVVAIPFTGVLQANIPTSLDFLFAFAGIIIIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+K+ + + ++++A+ + L ++ K
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMKEQFYAIDFVGMAMILLAVTIISLKDLLIENKQ 300
Query: 312 KT 313
K
Sbjct: 301 KV 302
>gi|39995652|ref|NP_951603.1| hypothetical protein GSU0545 [Geobacter sulfurreducens PCA]
gi|39982415|gb|AAR33876.1| membrane protein, putative [Geobacter sulfurreducens PCA]
gi|298504675|gb|ADI83398.1| DUF6-related membrane protein, putative [Geobacter sulfurreducens
KN400]
Length = 308
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/304 (10%), Positives = 88/304 (28%), Gaps = 13/304 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ A+ P T + ++WG + L+ + + +V + R + + +
Sbjct: 3 QAQTAAPPHAKVTAILLFTTLMWGGSFLFNKIGMREVPPVHFFFFRFALAALLMGGVCL- 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ N LA F+ + + + +
Sbjct: 62 -------PRLARLNRHIAVRGAVVGLALAAVNLTFVLGVSGTTISRAGYLNNLFVLFIPL 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIP 189
L +ER++ + L ++ L + + + A +
Sbjct: 115 LTFALWRERVDRVTFGGIALAVVGLWALASGGAEGFNQGDLLSTVCALFIAIHIIAVSRV 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + A +V F +G F + +
Sbjct: 175 LRDEDVYLVTFVQFVTVAAVGLVLCLVLPWPEFTIGRAGAWSLAYCALFPTVICFTLQNA 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + G++ P+ ++ VFIL + + ++++A+ LL +
Sbjct: 235 YQRFTTPTRAGLIYTLDPVWSMLFGVFILGERLTPRELAGCVLILMAVAGPLLARLYLEQ 294
Query: 310 KNKT 313
+++
Sbjct: 295 RHRR 298
>gi|15893372|ref|NP_346721.1| permease [Clostridium acetobutylicum ATCC 824]
gi|15022898|gb|AAK78061.1|AE007520_7 Predicted permease [Clostridium acetobutylicum ATCC 824]
gi|325507483|gb|ADZ19119.1| permease [Clostridium acetobutylicum EA 2018]
Length = 303
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 77/296 (26%), Gaps = 3/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T+ + + ++WG+ ++ V R + + +++F
Sbjct: 1 MKSKTIKSNIILLITALIWGLAFTAQSVGMKYVGPFTFNGIRFILGAICIVPVMLFFKED 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQ--GFLTSFSYFVTPVISVFLG 135
VG ++ I + T + Y V I
Sbjct: 61 KIEENSKYARAALVGGIICGMVNFLGTTLQQIGLMYTTVGKAGFITGLYIVIVPIIGIFL 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + A + + L + G + A +
Sbjct: 121 KHHMGINSWIGVLFALVGLYLLCNTGSFSVGYGETLELSGAFFFAVQIFIIDHFSKKANC 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + ++ F+ F L G + + G K AK
Sbjct: 181 YRLAFFQYVTCGAVSLIIALFTEKITFNALYGAAIPILYGGLGSVGIAYTLQIIGQKNAK 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
S I+ + + IL + + I G++++ M+V + S K
Sbjct: 241 PSHAAIIMSMESVFGALGGAIILGERMGAKNLIGCGLMLLGMLVAQIKLTKTSKKQ 296
>gi|254254753|ref|ZP_04948070.1| hypothetical protein BDAG_04069 [Burkholderia dolosa AUO158]
gi|124899398|gb|EAY71241.1| hypothetical protein BDAG_04069 [Burkholderia dolosa AUO158]
Length = 299
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 60/290 (20%), Positives = 126/290 (43%), Gaps = 8/290 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G L A ++ + +Y + L ++ L++ + R+LW+ PG I +L+
Sbjct: 9 RGILLSATASTMFALLSVYAKLLAPLTGLDIFAWRILWTAPGALALIALRGRWPALVALV 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++++ + + L SA +L + F++A L + S YF+ P+ V +G + E
Sbjct: 69 SRSVRDWRLLIALPVSAELLGLQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ LQ A L + + +L +A+ + Y R+ I S F +E+
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFALEI 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L AL V + G+ + L G G+L++ + + ++ G
Sbjct: 189 VLLCPIALAMVATSTTQIGDR----PLLWAALLPGLGVLSTLALASYLKASRMLPMALFG 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ Y P+L++ S+ +L + + + +G + IA+ + + + +
Sbjct: 245 ILGYVEPVLLVAVSLLLLGETLTVAQLATYGPIWIAVALTAWHSAMLMRR 294
>gi|328880999|emb|CCA54238.1| putative integral membrane protein [Streptomyces venezuelae ATCC
10712]
Length = 344
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/301 (10%), Positives = 80/301 (26%), Gaps = 28/301 (9%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
AS G + +G + + + L + L V+ RV + +
Sbjct: 3 ASQGRSAGLGLALASAFAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVMLPVAWRHRD 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L ++ F +A F+ ++ + ++ P + +
Sbjct: 63 LLRRKPAL--------LVGFGLLAVAGVQAFYFASISRIPVGVALLIEYLAPALVLGWVR 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFA 184
+ + + +L + L + L + + + A
Sbjct: 115 FVQRRPVTRAAALGVVLAVGGLACVVQVWAGLTFDLVGLLLALAAACCQVGYFVLSDQGA 174
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG------EHFFLGNIPDTLFLIGYGL 238
+ + + A+ G + G L +
Sbjct: 175 DEAEQADPLGVIAYGLLIGALVLTVVARPWGMDWALLGGSADMNGNGVPAWLLLGWIVLI 234
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ ++R G++ ++ V + +L Q +D + I +V+I
Sbjct: 235 ATVLAYVTGVVSVRRLSPQVAGVVACLEAVIATVLAWVLLGQHLDAPQIIGGAVVLIGAF 294
Query: 299 V 299
+
Sbjct: 295 I 295
>gi|255712297|ref|XP_002552431.1| KLTH0C04752p [Lachancea thermotolerans]
gi|238933810|emb|CAR21993.1| KLTH0C04752p [Lachancea thermotolerans]
Length = 372
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/330 (12%), Positives = 98/330 (29%), Gaps = 33/330 (10%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-------QVSVLEV 55
K S+ + L +G L++ + + + + T+ LE ++ L++
Sbjct: 9 TAGNKSNDSRLQRLSSEYLKPNIGLLYLLISNLFNSVMVVSTKLLETDPELEEPITPLQI 68
Query: 56 ISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTR 115
+ R+ + G ++Y + P L+ Y+L+
Sbjct: 69 LVVRMFITYIGTLIYMLYNRD--RIDHVPWGPPDMRKWLILRGCTGFFGVFGMYYSLMYL 126
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-- 173
+ F+ P + L L+ER + ++ AL+ ++ ++++ S + S
Sbjct: 127 SVPDATIITFLGPSFTGLLAWAILRERYSKVEATGALVSLMGVILIVRPSFLFGSSATDD 186
Query: 174 ----------------------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
+ S + I + + L + V
Sbjct: 187 SGGTAESRDPHARLVATIVALVGVIGASNVYIIIRYIGQRAHAIMSVSYFALIACCVSLV 246
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
G F+ + + GI+R + IM Y+ + I
Sbjct: 247 GICVIPSMGFQIPQTSKQWFLFTLIGFSGFFMQLLLTMGIQRERAGRGAIMSYSQIIYAI 306
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
VFI +++ + + +
Sbjct: 307 FWDVFIWHHLPGLWSWCGIIVILGSAIWVV 336
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 35/111 (31%)
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + +H G +LI G F Y +
Sbjct: 68 ILVVRMFITYIGTLIYMLYNRDRIDHVPWGPPDMRKWLILRGCTGFFGVFGMYYSLMYLS 127
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ I+ + P + + IL++ V + ++ +++ + P+ +
Sbjct: 128 VPDATIITFLGPSFTGLLAWAILRERYSKVEATGALVSLMGVILIVRPSFL 178
>gi|229096294|ref|ZP_04227267.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-29]
gi|229102407|ref|ZP_04233115.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-28]
gi|228681054|gb|EEL35223.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-28]
gi|228687254|gb|EEL41159.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-29]
Length = 321
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 96/297 (32%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 4 NRLKGIIMVIIGACLWGLSGTAAQQLFQYENVSTEWLVTIRLLISGVILLIISSFGTRKK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 64 EIFAIWKQKSDASKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 124 WNVRPSKIDYISITLSLVGTFLLLTNGSMHNLAVSTPAIIWGILSGLSLAFYSLYSKKLL 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + S E L I + +F
Sbjct: 184 EKWSSSVIVGWGMIIGGIGVTILHFVSTNEFILLSTIKYVKLSTLPLITFVVIFGTLIAF 243
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 244 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILS 300
>gi|332798245|ref|YP_004459744.1| hypothetical protein TepRe1_0229 [Tepidanaerobacter sp. Re1]
gi|332695980|gb|AEE90437.1| protein of unknown function DUF6 transmembrane [Tepidanaerobacter
sp. Re1]
Length = 303
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 90/284 (31%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F WG + ++ L ++S + + R + + F + F + ++
Sbjct: 8 YISLFSVACFWGTSWSVSKIGLRELSPVHLAVLRFILASIIFFCIVKLFYRDYVIEREDR 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K +G ++ + + +T + +F +E+LN+
Sbjct: 68 KWLWILGF----LGVVLYFFIQYYGLDMTTTVNSSILIATSPIFTIFLSAKLFHQEKLNY 123
Query: 146 LQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ L+ + + ++ G LL L V + +
Sbjct: 124 SDLLGILIAFVGVFLVFTAGKGISIGRSTIYGDLLLLLNSLVWALFTVLGKNLVDKYDPF 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + A + + + L + + + ++ GIK
Sbjct: 184 VVMAYINIYATITVLPIAFTPAFINSVKAASITTWAAALYLAVFCSVYSYYMWYKGIKTI 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S + Y P++ ++ + +LK+ + I +V I +
Sbjct: 244 GASKTAVFNYVNPMVAVIIGIILLKEDWNIYTIIGGILVFIGVY 287
>gi|312962443|ref|ZP_07776934.1| hypothetical protein PFWH6_4363 [Pseudomonas fluorescens WH6]
gi|311283370|gb|EFQ61960.1| hypothetical protein PFWH6_4363 [Pseudomonas fluorescens WH6]
Length = 319
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 80/275 (29%), Gaps = 1/275 (0%)
Query: 35 ILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
+ W +P L + ++ R L + + + G L+D
Sbjct: 18 LCWAFSPTGVHMGLHSYNPGQLALLRFLIASVFMGGVALVMGIGRPCLRDVPWLLVLGFF 77
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
VF + ++ A + ++ + V V L + +L
Sbjct: 78 GVFLHHMSLNAGQQWVTAAASSVLAQSAPLFSVLIASFCLKERVSAWRWSCVLVGLLGVL 137
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
+++ L + +A + FA + + ++ L V
Sbjct: 138 VVMWGDQGVGDIDPHGLLILLAAFSWSVYFAVQKHYAHRYSPLTMACYMVWSGTLMLGVN 197
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
+ L ++ + + Y +K ++S + Y P + +V
Sbjct: 198 LPGLPAAVAQAPLADNLAVLALGIFPSALAYLAWGYVLKHVEVSRATVAMYLIPPVAMVI 257
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ +L + I + IV+ ++ L S
Sbjct: 258 AATLLGEHIALQVVLGGVIVLASVAAISLERRWRS 292
>gi|307322661|ref|ZP_07601993.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|306891692|gb|EFN22546.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
Length = 328
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 83/278 (29%), Gaps = 7/278 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
MG L + I ++ + L S ++I R + + ++
Sbjct: 52 RHFMGILMMCIGVICLSMSDAIAKSLTPTYSPFQIIFLRN------LIPLPLAVIVAVAA 105
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + L S FV PV L S F +
Sbjct: 106 GGAGAIRSFSPATHLLRGILWLSAAVLYFSGLRDLPLAEASALVFVAPVFITILSSCFFR 165
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ + +A L+ +L + ++ SA+ A + +
Sbjct: 166 EKVGCRKWLALLMGFAGVLTIIRPGAETFQPASLLPLVSAFFSALLLLSARYIDPRESGW 225
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + +G + I D +G ++ + + + A + V
Sbjct: 226 TLVLYLNSTSALLSGLMMPFVWTPVRIDDVWLFLGIAVVGTAGMTFMTQAFRLAPATIVA 285
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++Y L + + D + +++++ V
Sbjct: 286 PLDYAGLLWSTLLGWLCWNETPDAAALLGATMIILSGV 323
>gi|254974943|ref|ZP_05271415.1| hypothetical protein CdifQC_06495 [Clostridium difficile QCD-66c26]
gi|255092332|ref|ZP_05321810.1| hypothetical protein CdifC_06687 [Clostridium difficile CIP 107932]
gi|255100413|ref|ZP_05329390.1| hypothetical protein CdifQCD-6_06357 [Clostridium difficile
QCD-63q42]
gi|255306358|ref|ZP_05350529.1| hypothetical protein CdifA_07177 [Clostridium difficile ATCC 43255]
gi|255314070|ref|ZP_05355653.1| hypothetical protein CdifQCD-7_06955 [Clostridium difficile
QCD-76w55]
gi|255516750|ref|ZP_05384426.1| hypothetical protein CdifQCD-_06519 [Clostridium difficile
QCD-97b34]
gi|255655406|ref|ZP_05400815.1| hypothetical protein CdifQCD-2_06817 [Clostridium difficile
QCD-23m63]
gi|260683006|ref|YP_003214291.1| hypothetical protein CD196_1262 [Clostridium difficile CD196]
gi|260686604|ref|YP_003217737.1| hypothetical protein CDR20291_1239 [Clostridium difficile R20291]
gi|296451394|ref|ZP_06893132.1| integral membrane domain protein [Clostridium difficile NAP08]
gi|296880256|ref|ZP_06904221.1| integral membrane domain protein [Clostridium difficile NAP07]
gi|306519947|ref|ZP_07406294.1| hypothetical protein CdifQ_07727 [Clostridium difficile QCD-32g58]
gi|260209169|emb|CBA62395.1| putative membrane protein [Clostridium difficile CD196]
gi|260212620|emb|CBE03643.1| putative membrane protein [Clostridium difficile R20291]
gi|296259810|gb|EFH06667.1| integral membrane domain protein [Clostridium difficile NAP08]
gi|296428699|gb|EFH14581.1| integral membrane domain protein [Clostridium difficile NAP07]
Length = 296
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 105/287 (36%), Gaps = 6/287 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G +F+ + + + + + + + + + R L S F+ I+
Sbjct: 2 SSTIKSNRIKGIMFIIASALGFAMMSAFVKLAGDLPSFQKVFFRNLVSAIIAFWLIIKHK 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G L+ K+ LK +L++ + + F YA+ + ++P + V
Sbjct: 62 GSLTGKKENLK------VLLYRSIFGTLGVIFNYYAIDKLMLSDANMLNKMSPFLVVIFC 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ LKE++N QI A ++ + L + + + + A A +
Sbjct: 116 AIALKEKINVKQIGAIIIAFIGALFIIKPTFSVEVIPYLGGIAGAVFAAMAYTCLRVLGD 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ ++F +V G + + ++L+ G+ S + K A
Sbjct: 176 REDYYTIVFFFSVFSLVTVGPIAFAVYEPMTLMQLIYLLLGGVFASLGQFGITLAYKYAP 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ I +Y+ + + S+F+ D + + + IV A L
Sbjct: 236 AKEISIFDYSNIIFSAILSIFLFNVYPDMLSVVGYLIVFSAAFYMFL 282
>gi|229816926|ref|ZP_04447208.1| hypothetical protein BIFANG_02177 [Bifidobacterium angulatum DSM
20098]
gi|229785671|gb|EEP21785.1| hypothetical protein BIFANG_02177 [Bifidobacterium angulatum DSM
20098]
Length = 309
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/306 (9%), Positives = 93/306 (30%), Gaps = 11/306 (3%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVL 61
+ K S+ +S + + ++G V +WG ++ L V L + R
Sbjct: 4 SKKTGTSRIISFSSDAKSILVGMALVLIGGAIWGCNATVSKLLMSNYSVDPLWLACIREF 63
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
++ +F L+ P L + + V ++ ++ +
Sbjct: 64 FAGL-LFLIAGGIMSPNKLVGAAKDVPSYPKYLALALCCVLVGQVSYLQSINWTNSGTAT 122
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAI 174
+ ++ + + + I L + +++ L+ +
Sbjct: 123 ILQSLNLLVVLAWVCIMSHRMPRKRETIGVALAFIGTVLIATGGNLSTLALPPQGLAWGL 182
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
A + + + + G F+ ++ + + + ++ L
Sbjct: 183 ANAIATSALSIMPTAMIAKWGNFVTNGIMFLISGLVLCPFVQPWAHLPKFDVASVSMLLF 242
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
L + +F G+ R ++ P++ +++V + F +++
Sbjct: 243 TVVLGTFGAYALFMAGVMRIGSIRATMLGTIEPVMATLTAVLFTGVVFGPADLVGFILII 302
Query: 295 IAMVVY 300
+ + +
Sbjct: 303 VMVFLV 308
>gi|317128727|ref|YP_004095009.1| hypothetical protein Bcell_2016 [Bacillus cellulosilyticus DSM
2522]
gi|315473675|gb|ADU30278.1| protein of unknown function DUF6 transmembrane [Bacillus
cellulosilyticus DSM 2522]
Length = 328
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 101/310 (32%), Gaps = 16/310 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
K+ + L + V ILWG+ + +FL E + + + R+ + +
Sbjct: 13 KKGSKLSKTWTYILVLFVMILWGLNVVAVKFLVESLPPVAMQGLRIFIGGIIAIIVLFFL 72
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L K + + L+ S + P+ +
Sbjct: 73 KDLRKLTKKEWGYTIVAAVFGQMLHHSLLA-----LGLVQTTAGNASLILGLIPLATAIF 127
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTI 188
+FLK+ + L+ I L + ++ L + + + IA+ A+ F
Sbjct: 128 AMLFLKDSITLLRTIGIALGFGGVCLVVLQNAEIGVISPGDILVFIAMLSQAFSFVIIKK 187
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE----HFFLGNIPDTLFLIGYGLLNSFVF 244
+ + +L + A+ ++ + + I T+ ++
Sbjct: 188 VTATLSSRQLTAVMLLVGAVMLLILSFIFEPQGVGNLVHGNTIVWTVLVLSAVFATGLGH 247
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+++ I+ I P + ++ + F+L + I T + I F ++V+ ++
Sbjct: 248 ILYNAAIQEIGAGQTAIFNNLVPFISLIGAFFLLGEAIYTSQIIGFVLIVLGVLFGTGYI 307
Query: 305 VINSGKNKTK 314
K +
Sbjct: 308 ETRVLKKRMN 317
>gi|260890008|ref|ZP_05901271.1| putative membrane protein [Leptotrichia hofstadii F0254]
gi|260860614|gb|EEX75114.1| putative membrane protein [Leptotrichia hofstadii F0254]
Length = 351
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/294 (10%), Positives = 81/294 (27%), Gaps = 6/294 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
M + A I + I +++ L ++ + S L + GV ++
Sbjct: 3 KSRKFMAVILALIAAIFYAINTPFSKVLLNKIPPTLMASFLYLGAGTGVGIMYLFHRKVE 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + + F + + S V + + +
Sbjct: 63 EKYEKLNKADLPYTVGMIVLD--IAAPVFLMIGINIGSASNASLLGNFEIVATTLIALLI 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSEG 195
+E++ IA I +S +++++ L ++ S+
Sbjct: 121 FREKVTSKLWIAIGFITVSSIVLSVEGAESLKFSLGSLFVILATCCWGLENNCTRKISDK 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E+ +L + L+ + ++ +
Sbjct: 181 STYEIVLLKGFFSGSGSFIVALISGERIPQIKYIIAALLLGFVAYGLSIFMYIRAQRDLG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ AP + + + + + V I ++I V+ + T++
Sbjct: 241 AAKTSAYYAVAPFVGTFLAFVVNGEKLTLVYFIGLVFMIIGSVIVVYDTMVKRH 294
Score = 37.6 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 6/171 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
SL +G+LFV A WG+ T+ + S E++ + +S G F + +
Sbjct: 150 SLKFSLGSLFVILATCCWGLENNCTRKISDKSTYEIVLLKGFFSGSGSFIVALISGERIP 209
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K + + +I A TS Y V P + FL V
Sbjct: 210 QIKYIIAALLL------GFVAYGLSIFMYIRAQRDLGAAKTSAYYAVAPFVGTFLAFVVN 263
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
E+L + I + +I+ +I+ + + S + + + +
Sbjct: 264 GEKLTLVYFIGLVFMIIGSVIVVYDTMVKRHSHSHSHIIVHTHDGKTHTHI 314
>gi|229830077|ref|ZP_04456146.1| hypothetical protein GCWU000342_02183 [Shuttleworthia satelles DSM
14600]
gi|229791375|gb|EEP27489.1| hypothetical protein GCWU000342_02183 [Shuttleworthia satelles DSM
14600]
Length = 298
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/278 (10%), Positives = 81/278 (29%), Gaps = 7/278 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P + G L V + + L+ + + ++ R + ++ L
Sbjct: 10 KKNPHLAGILLVIIDSFFFSLMALFVRMSGDLPTMQKSFFRNAIAAVIAIMTLMGTEEKL 69
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K +L + + + +A+ + ++P ++
Sbjct: 70 KIKKGSLPSLFFRSLC------GGLGMIANFWAIDHMALADANLLNKLSPFWAIIASIFI 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-F 197
L E +++ +L + + + A+A + V
Sbjct: 124 LSEIPRKKEVLFVILAFIGASFVVRPTAGLASLPALAGLFGGMGAGFAYTFVRKLGMQGE 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++A + F + + F + L+G G + + + A
Sbjct: 184 RGPLIVAFFSTFTSLLSLPFMVFDFHPMSAAQWACLLGAGTCAALAQFAITKAYQLAPAK 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + +Y+ L + + + D I + IV+
Sbjct: 244 EISVFDYSQVLFASLWGLLFFAELPDVWSMIGYVIVIA 281
>gi|237710066|ref|ZP_04540547.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229456159|gb|EEO61880.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 295
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 84/294 (28%), Gaps = 8/294 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+++R + +
Sbjct: 1 MNRIKGILYAAVSSATFGLAPFFSISLLAIGYSSFEVLTYRWGVATVVLLVFAFLTKCDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + +L + T ++ + A + V ++VF
Sbjct: 61 HIGYKNFKTIFGLSLLR-ALTSFSLVIAYQNIASGVASIIHFMYPLAVAVTMAVFFREKK 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS----- 193
+ + +LS + + G ++ L A +
Sbjct: 120 SIVTFAAIVLSLVGASLLSSGNIEYNGGNRMVGLIAACISVFSYAGYIIGIRKTRAVEVN 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ LF + + G + I + +K
Sbjct: 180 STVLTCYVMGLGALLFLLGGLFYDKGVRWETNVITWLYIGGLALPATAISNITLVKAVKL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + ++ PL ++ VF+ + T + +VVI + + L
Sbjct: 240 AGPTLTSLLGALEPLTAVLVGVFVFNELFTTYSALGIILVVIPVSLVLFQQKRT 293
>gi|297623978|ref|YP_003705412.1| hypothetical protein Trad_1751 [Truepera radiovictrix DSM 17093]
gi|297165158|gb|ADI14869.1| protein of unknown function DUF6 transmembrane [Truepera
radiovictrix DSM 17093]
Length = 292
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 86/289 (29%), Gaps = 9/289 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L VF A +LWG+ +++Q + V LE+ R +
Sbjct: 1 MNGYLLVFAAAVLWGLIGVFSQGILDAGVGALEIAFWRAALAGALFAAHARLTGQLKLA- 59
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ F+ + + + + A+ T L S + P L E
Sbjct: 60 ----GARDFGALAAFAGVGVTLFYAAYTLAVQTGGVSLASLLLYSAPAFVALAAWALLGE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--IAVTWSAYCFARKTIPVGSSEGFFIE 199
L ++ L ++ + +++ G + + A G
Sbjct: 116 ALTLSKLGLLALTLVGVALVSQGGGEGVRVGPASLFWGLVAALAYASYYIFGKWVLARYA 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L L L+ + + ++ G+KR + S
Sbjct: 176 PVTIYAVVLPIGALGLLPLVTFAPKTPSVWGLLLLLAAVSTYAAYGLYYTGLKRVEASRA 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ P++ + + + + + + ++ A V+ LP
Sbjct: 236 VLVASVEPVVAALLAALLFGERLGAWGLLGGAAILGAAVLASLPARAAR 284
>gi|158333482|ref|YP_001514654.1| hypothetical protein AM1_0254 [Acaryochloris marina MBIC11017]
gi|158303723|gb|ABW25340.1| DUF6 domain transmembrane protein [Acaryochloris marina MBIC11017]
Length = 307
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/291 (8%), Positives = 79/291 (27%), Gaps = 8/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + + I P++ + L ++ +R+ +++P + + S
Sbjct: 17 KPNPYAFIALLLGAIGIAFAPIFVR-LSELGPSATAFYRLGFAVPLLGVWLWTSRPATSF 75
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + A + +++ + P+ V G +
Sbjct: 76 PVNEQRVTGLPLIS--AGCFFAADLAVWHWSIQFTSVANATLLANFAPIFVVLGGWLLFG 133
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEG 195
E ++ ++A L++L ++ S + + A
Sbjct: 134 ETVSRWFLVAIALVLLGATLLVSASIDTQHVFGDALGLLTAIFYAGYILSVARLRLHFPT 193
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + A SG + + + + + +
Sbjct: 194 ATIAFACSIVGATILFFIAWLSGEGFLPMTMTGWLSLVGLACISQVIGQSLIMFALAHLP 253
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + P+ + + + + + + IV+ +V+
Sbjct: 254 SAFASVSLLLQPVTAAILAWRLFGEALTLQQGFGGVIVLAGIVLARWSDRK 304
>gi|161519808|ref|YP_001583235.1| transporter DMT superfamily protein [Burkholderia multivorans ATCC
17616]
gi|189354014|ref|YP_001949641.1| chloramphenicol-sensitive protein [Burkholderia multivorans ATCC
17616]
gi|221210401|ref|ZP_03583381.1| RarD protein [Burkholderia multivorans CGD1]
gi|160343858|gb|ABX16943.1| RarD protein, DMT superfamily transporter [Burkholderia multivorans
ATCC 17616]
gi|189338036|dbj|BAG47105.1| chloramphenicol-sensitive protein [Burkholderia multivorans ATCC
17616]
gi|221169357|gb|EEE01824.1| RarD protein [Burkholderia multivorans CGD1]
Length = 299
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 55/293 (18%), Positives = 116/293 (39%), Gaps = 6/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---L 81
G + A L+ + Y ++L ++ L++ + RVLW+ PG I +L L
Sbjct: 9 RGVMLSVAASTLFALMSAYAKWLTPLTGLDIFAWRVLWTAPGALALIALRGRWPALAALL 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++++ + + L +A +L + F++A L + S YF+ P+ V +G + E
Sbjct: 69 SRSVRDWRLLVALPVTAALLGLQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L + + + F + S F
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAVEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL V + G + + L G G+L++ + + ++ GI
Sbjct: 189 VLL---CPIAVAMVATSGTPVAPHPLLWSTLLPGLGVLSTLALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++ S+ +L + + + +G + +A+ + + + + T+
Sbjct: 246 LGYVEPVLLVAVSLLLLGETLTVAKLATYGPIWVAVALTAWHSAMLMRRLPTR 298
>gi|160885097|ref|ZP_02066100.1| hypothetical protein BACOVA_03095 [Bacteroides ovatus ATCC 8483]
gi|237714924|ref|ZP_04545405.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262406808|ref|ZP_06083357.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294809167|ref|ZP_06767883.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b]
gi|298483674|ref|ZP_07001849.1| integral membrane protein [Bacteroides sp. D22]
gi|299147799|ref|ZP_07040862.1| putative integral membrane protein [Bacteroides sp. 3_1_23]
gi|156109447|gb|EDO11192.1| hypothetical protein BACOVA_03095 [Bacteroides ovatus ATCC 8483]
gi|229445249|gb|EEO51040.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355511|gb|EEZ04602.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294443561|gb|EFG12312.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b]
gi|295084689|emb|CBK66212.1| Predicted permease, DMT superfamily [Bacteroides xylanisolvens
XB1A]
gi|298270244|gb|EFI11830.1| integral membrane protein [Bacteroides sp. D22]
gi|298513982|gb|EFI37868.1| putative integral membrane protein [Bacteroides sp. 3_1_23]
Length = 303
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 96/298 (32%), Gaps = 15/298 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A +G+ PL+ + +SV V+ +R ++ + +
Sbjct: 2 TNKTKGFIYGAIAAASYGMNPLFALPLYAAGMSVDTVLFYRYFFATIVLGILMKMQHQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K + + + + + + S FV PV+ + +F
Sbjct: 62 ALHKADVLPLVIM------GLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVAVIMGIF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
KE+++ + + + LL + + ++ G + L +++++ Y +
Sbjct: 116 FKEKISAITVFSILLALSGIALLYQGDGNKPLSTLGIIFVLLSSLSYAIYIVGVNRSTLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y+V F L L + + I
Sbjct: 176 NLPTTKLTFYAILFGLSVYIVRLNFCTELQVIPSAWLWADVLSLAILPTAVSLVCTALAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ P+ + V + + + + +++ A+ + ++ +
Sbjct: 236 HYIGSTPTAILGALEPVTALFFGVLLFHEKLTPRLMMGILMIITAVTLIIIGKSLIKK 293
>gi|159042826|ref|YP_001531620.1| hypothetical protein Dshi_0270 [Dinoroseobacter shibae DFL 12]
gi|157910586|gb|ABV92019.1| protein of unknown function DUF6 transmembrane [Dinoroseobacter
shibae DFL 12]
Length = 301
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 90/294 (30%), Gaps = 7/294 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G ++ + + E++ + +VI R ++ + + +
Sbjct: 13 NLRGAAYMLVVTASFTTGDALIRLATEEMPLFQVIFLRSWIAVAFLGLLVWRAGAHRMRV 72
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ + F AL S P+ G+VFL E
Sbjct: 73 GPRDRR-----LIGLRSAAEVCAMVPFFIALANMPFANVSALLQALPLSLTLAGAVFLGE 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-FFIEM 200
+ ++ A ++ +L++ G + A+ V + + + +
Sbjct: 128 PVGWRRLAAIVVGFCGVLLIVQPGGSGFTAYALLVLLTVVFVTFRDLSTRRISPEIPAVL 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + V S + + L L G G+ + + + ++ ++ V
Sbjct: 188 LGLVMAVFVLVSSGVLSLLTPWQPVTVRGALLLFGAGVFIASGYIFAALAMRHGEIGFVT 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y A + ++ F+ + D + +VV + L + +
Sbjct: 248 PFRYMALVWAVLLGFFVFGEWPDALTWAGALLVVATGLYTLYREQVVRRAARRA 301
>gi|78357897|ref|YP_389346.1| hypothetical protein Dde_2856 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220302|gb|ABB39651.1| membrane protein, putative [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 288
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 10/288 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + +G ++V A ++W Q E + +EV R L
Sbjct: 1 MQSALGYVYVALAALMWAFIGPLAQICFNEGTTPMEVAFWRCLTGALFFMAHAAVTGRWR 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L+D A F +A+ +G + ++ L S + P L +
Sbjct: 61 AGLRD------APVFTAFGLVGIALFFGSYQISVREGGAALASIMLYTAPAWVALLARIC 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA--VTWSAYCFARKTIPVGSSEGF 196
E L ++ A L + ++++L G S+ A G +
Sbjct: 115 FAEALTPHRLAALALAMSGTMLVSLSGGAGSGSVTAGVLWGLVAGFSYSLHYVFGKNYLH 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L L + ++ L + + G+KR
Sbjct: 175 RYSSVTLYSYCLPAGALALLPWVTFSQHSALGWFALIMEGFLCTWLAYLAYCAGLKRLAA 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S I+ P+ V + + + + V +V+ + V +
Sbjct: 235 SRAAIVANLEPVAAAVLAYWWWNEILPPVGLAGSALVLSGVFVVVREK 282
>gi|78060964|ref|YP_370872.1| RarD protein [Burkholderia sp. 383]
gi|77968849|gb|ABB10228.1| RarD protein [Burkholderia sp. 383]
Length = 299
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 114/293 (38%), Gaps = 6/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---L 81
G + A +L+ + Y + L ++ L++ + RVLW+ PG I +L L
Sbjct: 9 RGLMLSVTASMLFALMSAYAKLLAPLTGLDIFAWRVLWTAPGALALIALRGRLPALVDLL 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++++ + + L SA +L V F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSVRDWRLLIALPVSAALLGVQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L + + + F + S F
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAVEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + H + + L G G+L++ + + ++ GI
Sbjct: 189 ALL---CPIAFAMVATSTTHVADHPLLWAVLLPGLGVLSTLALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++ S+ +L + + + +G + +A+ + + + + +
Sbjct: 246 LGYVEPVLLVAVSLLLLGETLSVAKLATYGPIWVAVALTAWHSAMLMRRLPAR 298
>gi|331006181|ref|ZP_08329505.1| hypothetical protein IMCC1989_59 [gamma proteobacterium IMCC1989]
gi|330420012|gb|EGG94354.1| hypothetical protein IMCC1989_59 [gamma proteobacterium IMCC1989]
Length = 327
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P L + + W + +F V + R W+L +
Sbjct: 6 SPKTFAFLGLAATNLFWAGNAVLARFASDGVPPFTLAFSR--WALALLILLPFAAPYLKG 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + V +L F + ++ A + + P+I++ + + L
Sbjct: 64 TWPEVRRQWPVVIVLGFLG--ITIYNTVLYLAAHSTTAVNITLMSSNLPLITLLISWLML 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKT 187
E+ Q+ + +L + ++ + G L+ RK
Sbjct: 122 NEKPRGWQLFGIMSSLLGITVIISNGDLSQLLSLQFNIGDLLILGIAFCWSLYSVILRKY 181
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + +P F + + F + + L + F + +
Sbjct: 182 PINIHPVALLTVLIAVGLPFTFVLFFIELRMLPPFSISKSGSLIILYVAIFPSIFAYLFW 241
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
YGIK+ + + Y PL + ++ +L + + T I V+I + L
Sbjct: 242 GYGIKQLGPNIAALSCYLMPLFTALLAIPLLGESLHTYHLIGGAFVLIGLYFGTLFKRQK 301
>gi|302336646|ref|YP_003801852.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
gi|301633831|gb|ADK79258.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
Length = 288
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 95/285 (33%), Gaps = 17/285 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A +WGI P+ + L + L + R+L + ++ + K+ K
Sbjct: 4 LMLIAAAFIWGINPMIMKIGLATIDPLRYNTLRLLLAFLVSLIFVLLGRRWKPVAKEDRK 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + G + + + +++ + PV + V +E++
Sbjct: 64 R-----FIAVGLGGFFIFQGGYTFGVHDTAASISAIILALLPVFVAVISIVTRQEKITVK 118
Query: 147 QIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + L +L +L +T G+ LL +A + R S E
Sbjct: 119 KALGIALSVLGVLAITAGGEAVSVKGTYLRGVLLLVIAEFAYAVYTVYVRPLTKRYSIEQ 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + F FF ++S+G+KR
Sbjct: 179 IVCIVIFIVLLPFLLISLPVFLRSGLFFPTLAESFSIGYAGTFGILIGNVLWSHGVKRIG 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + +P+ +++ +L + + ++ V++ + V
Sbjct: 239 STGTSMYSNLSPIFGVIAGFLVLAERLAPLQIAGGAAVLLGVWVV 283
>gi|294084048|ref|YP_003550806.1| integral membrane protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663621|gb|ADE38722.1| integral membrane protein, putative [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 330
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 86/290 (29%), Gaps = 7/290 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + L+ + ++L + +++ VL+S P V I+
Sbjct: 5 KQSSAKGAFLSLVGFGLYSTHDVVVKYLGGFYTPFQIMFFSVLFSFPLVTLYIL------ 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ P + ++ YA T F+TP++ L
Sbjct: 59 RNPRTGSLWPHHPVQMSIRVLATSLSGFCTFYAFSVLPLAQTYALLFLTPILITVLSIPV 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ER+ + ++ L+ + +L++ + +A A ++
Sbjct: 119 LGERVGLHRGLSVLVGFIGVLVVLQPGDVSFTLGHLAGLGGVVGAATNSLITRRIGQREK 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+L P L + G + + + LL + A +
Sbjct: 179 MAVMLLYPMLGNFLIMGSVLPFVYEPMPLLHLGSIAILALLGFLAMFFIVSAFQNANAAI 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ M+Y+ L + + + +++ + + + +
Sbjct: 239 IAPMQYSQILWAGFFGLILFSDQVTISLVAGSALIIASGLYIVKRELSQK 288
>gi|254423606|ref|ZP_05037324.1| Integral membrane protein DUF6 [Synechococcus sp. PCC 7335]
gi|196191095|gb|EDX86059.1| Integral membrane protein DUF6 [Synechococcus sp. PCC 7335]
Length = 298
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 16/305 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N++ L A + WG T + L L V S R L + +
Sbjct: 2 NSTSSRPADILLTALAPLFWGTTYVVATELLPSGHPLLVASMRSLPIGLLLTIGL----- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ K MLV + V A G + + + + P++
Sbjct: 57 -----RKLPKGIWWWRMLVLGGLNIGVFQALLFVAAYRLPGGVAATTGAIQPLLVGLFAW 111
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK-----TIPVG 191
L ++ + L +IAA + + + ++ L G L ++ I +
Sbjct: 112 TILNQKPSSLSVIAAFMGFIGVGLLVLGPGAQLDTIGIIAALAGAGAMGLGTVLVKRWHP 171
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
LAI L + G + + F+ + + + ++ GI
Sbjct: 172 PVSLIVFTAWQLAIGGLMLLPIALVVEGPFAEITRMNLWGFIYLGLVGTALAYALWFRGI 231
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
R + + +P++ + L++ +T IV++++ + +
Sbjct: 232 DRLNPTAASYLGLLSPVVATLIGYVFLQETFSVGQTFGIAIVLLSVAIGQESQSQHKLMR 291
Query: 312 KTKKS 316
+ K +
Sbjct: 292 RLKTN 296
>gi|150025659|ref|YP_001296485.1| permease YojE [Flavobacterium psychrophilum JIP02/86]
gi|149772200|emb|CAL43676.1| Probable permease YojE [Flavobacterium psychrophilum JIP02/86]
Length = 295
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/290 (15%), Positives = 110/290 (37%), Gaps = 9/290 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L ++++WG L + L L+++ +RV ++ + F
Sbjct: 7 YLSALSSFVIWGFFSLVLKPLHNYPSLDILFYRVFYATGLSIIINLLFRKEKLKNDWKSY 66
Query: 87 -------NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + V +L +W FIYA+ SF+Y + P+++ L L
Sbjct: 67 LTLEKKEKIKTLLLTVLGGFLLTFNWFMFIYAINHVSLKSASFAYLICPIVTTILAYFIL 126
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+L+ Q + L I+S +++ L+ + A + +
Sbjct: 127 KEKLSKWQWFSVFLCIISCAMLSYGDLRGLIYSLVIAISFALYLISQRENNKFDRFVVLT 186
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L + + + G L + + ++ S V
Sbjct: 187 VQLLIASMVLLPFFPVYRGEIPTEPIFYILMTI--IVVLFTIIPLFLNLFALRGITSSAV 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
GI+ Y+ P++ ++ ++F K+ I++V+ + +++ +++++ + S
Sbjct: 245 GILMYSNPMINLLLAIFYFKEEINSVQIGSYLLILFSIIIFNEKLLRVSK 294
>gi|254303129|ref|ZP_04970487.1| DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148323321|gb|EDK88571.1| DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 302
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 87/301 (28%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L +F A +WG + ++++ R + ++ + ++
Sbjct: 1 MNKKRYFGDLMLFLAAFIWGTAFVAQVTGMDKIGPFTFNMARSIIAIICLGAYLIITKAK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L V + + L T F +I FL
Sbjct: 61 LPKDIGILLQGGLVC-----GFFIFMGTSLQQIGLQYTTAGKTGFITSFYILIIPFLTMF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVG 191
FLK +++ L I+ ++ + L ++ + S + +
Sbjct: 116 FLKHKIDLLTWISIVIGFIGLYLLAIPSLSDFSINKGDFIVFLGSFCWGGHILIIDYYSK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN--IPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + E L N L + + +
Sbjct: 176 KVSPVELSFLQFVVLTILSGICAFLFENETATLSNIFHSWKSIAYAGFLSSGIAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K ++ + ++ FIL + + + + IV +A++ +P I
Sbjct: 236 GQKYTNPIVASLILSLEAVFAALAGYFILDEVMTSREFLGCSIVFLAIIFSQIPKDIFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|145300891|ref|YP_001143732.1| permease [Aeromonas salmonicida subsp. salmonicida A449]
gi|142853663|gb|ABO91984.1| predicted permease [Aeromonas salmonicida subsp. salmonicida A449]
Length = 299
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/290 (8%), Positives = 73/290 (25%), Gaps = 3/290 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A +WG+ + + ++ + R L + + + + +
Sbjct: 5 MMLLMAAAIWGLGFVAQRLGMDHMGPYTFNGLRFLLGAASLLPLLWWLKSRQPSGQSEDR 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQG--FLTSFSYFVTPVISVFLGSVFLKERLN 144
G L+ A + + + L T + Y + +
Sbjct: 65 RLLLTGGLLAGAVLFSAASLQQVGLLYTTAAKAGFITGLYIILVPVIGLALRHKTGTNTW 124
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+IA + + G L + A +
Sbjct: 125 VGALIAMAGLYYLSVTEDFTIGYGDLLQVAGALFWAIHLLVLDHYSSRVAPIRLASVQFL 184
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ L + L + + + G + A + I+
Sbjct: 185 VCGLLSLAVAFTIEMPTISGAVAGWQALLYAGLVSVGVGYTLQVVGQRGAHPAHAAIILS 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + V +L + +D + +++ M++ + K +
Sbjct: 245 LETVFAAIGGVLLLGEILDERAIVGCALMLAGMLISQVRLRWWWKSRKDR 294
>gi|27382171|ref|NP_773700.1| hypothetical protein blr7060 [Bradyrhizobium japonicum USDA 110]
gi|27355341|dbj|BAC52325.1| blr7060 [Bradyrhizobium japonicum USDA 110]
Length = 325
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 72/281 (25%), Gaps = 16/281 (5%)
Query: 36 LWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
W + + + V L V + R W + + K+ + L
Sbjct: 45 FWAGNIVLARHVGAHVPPLTVTTIR--WFGVFLILLPFAWPHLKRDWPALRKSLPLMLFL 102
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
A + +AL + P+ RL Q+ +
Sbjct: 103 SLVG--FAFNNAISYWALQYTEALNALLIQSAGPLFVALWSLALFGVRLTAAQLAGIAIS 160
Query: 155 ILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+L +L + L ++ + V + Y P F
Sbjct: 161 LLGVLTIILRGDLSALASISFNRGDIMFASSLVAFGLYSAFIPRRPKVHQLSFLSFTTCC 220
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L G + F ++ + F+ G+ +
Sbjct: 221 GAIMLLPTAVWEAWSGNVMQFDGVTLATFGYILIFPSTLAYLFFNRGVALIGPNRAAPFF 280
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ P+ ++ +L + + I + +V+ +V+
Sbjct: 281 HLVPVFGSAMAILLLGEKLQPFHLIGYALVLAGVVIASRQG 321
Score = 41.4 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 50/171 (29%)
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ RL + A + + + P L L+++ + A
Sbjct: 1 MSRRQSGARLYLTPMTTASPAPPASNPASWLNNQPYLLLSLSSLFWAGNIVLARHVGAHV 60
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L + + + L L + +F I + ++
Sbjct: 61 PPLTVTTIRWFGVFLILLPFAWPHLKRDWPALRKSLPLMLFLSLVGFAFNNAISYWALQY 120
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +++ PL + + S+ + + + I ++ ++ +L
Sbjct: 121 TEALNALLIQSAGPLFVALWSLALFGVRLTAAQLAGIAISLLGVLTIILRG 171
>gi|332143278|ref|YP_004429016.1| probable transmembrane protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553300|gb|AEB00019.1| probable transmembrane protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 294
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/296 (9%), Positives = 95/296 (32%), Gaps = 15/296 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +WG + ++ + + + +++ R L + + ++ +
Sbjct: 6 IISLLVLAGIWGGSFIFMRVAAPEFGIYVLVAIRTLLATAVLLPLLMLRGSVKEI----- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + A+ + F Y+ L + + + P+ + ++L +RL+
Sbjct: 61 -KHHWLAIALVGMANTAIPFVLFNYSSLHLEAGVNAILNATAPMFGAIVAWLWLDDRLSK 119
Query: 146 LQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + L + +++ S +P+L+ +A T + + +
Sbjct: 120 SAVAGLFVGFLGVTVISQQKLGEGAVSFLPILTALLATTGYGIAACMMKKWLQGVKPLVV 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
A+ ++ + + + + + ++ I +
Sbjct: 180 ATGSQAMASVMLAPFALATLPDTM-PSANAWVNAVALAVGGTGIAYILYFKLIADIGPAK 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y PL I+ V L++ + + +++ + + K K
Sbjct: 239 AITVAYLVPLFGIIWGVLFLQEHLSIQTIVGGLMILFGVALTTGVLKRKRLKVKPA 294
>gi|300709756|ref|YP_003735570.1| hypothetical protein HacjB3_01925 [Halalkalicoccus jeotgali B3]
gi|299123439|gb|ADJ13778.1| hypothetical protein HacjB3_01925 [Halalkalicoccus jeotgali B3]
Length = 324
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/299 (8%), Positives = 74/299 (24%), Gaps = 14/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T + + +G T + + LE + L ++ R + + +
Sbjct: 6 STTRSVVAFLATAVFFGGTFVAAKAGLEYMPPLLFVALRFDIAAVVLLGYVFLT--VPRE 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF-L 139
G+ + + + S + + P+++ ++
Sbjct: 64 RWLPKTRADLAGIAAAGLLTIGLANAMIFLGQQYVTSAVASVVFSLNPILTPVFATLLLS 123
Query: 140 KERLNHLQIIAALLIILSLLIMT----------LHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ERL+ ++ I + + + ++ G +L + ++
Sbjct: 124 EERLDVVEAIGMAVALGGVAVVMELHPTSLLASAGIGHAILLVGAVAVALGGVLIKRVDA 183
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S L + + + +
Sbjct: 184 TMPSTARTAWGLPLGAAFCHLLAGVRGEQVAAIEWNATSVIALGYVAVFSGALAYMAYFG 243
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I + + Y P++ + +L + I F +V + +
Sbjct: 244 LIDEIGATRANLTFYLVPIVAAIGGWAVLGEAITVTTVAGFLVVFAGFALINREQLGRR 302
>gi|270262844|ref|ZP_06191115.1| DMT superfamily drug/metabolite efflux protein [Serratia odorifera
4Rx13]
gi|270043528|gb|EFA16621.1| DMT superfamily drug/metabolite efflux protein [Serratia odorifera
4Rx13]
Length = 299
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 95/299 (31%), Gaps = 13/299 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + + ++ + + +R L +L + ++ +
Sbjct: 1 MLFPLLAVLIWSVNAVVSKLSATAIDPAAISFYRWLLALIVLTPFVL----PGVIRNWRE 56
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ + ++ YA + + P++++ + V L+
Sbjct: 57 VRANGWKLLILGLLGMVLYQSLAYYAAHSVSALFMGIIVSLIPLLTILISIVLLRIAPTV 116
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I ++L L+ + GI L + ++Y
Sbjct: 117 GVAIGSVLSFGGLIWLVSAGHPGELLQHGIGKGELMMFAAAASYALYGVLTKRWMIALPN 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F + L + L L + ++ G+ R +
Sbjct: 177 WQALYVQILFGVVLLLPNFLMAQDVGLNSQNIPLVLFAGIPASIIAPFLWIQGVMRLGAN 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
T I +P+ V +V L + + + I G+ ++ +++ K K +
Sbjct: 237 TASIFMNLSPVFTAVIAVLFLHEQLHSYHLIGGGVTLLGVILSQRLRTPLGRKAKKPAA 295
>gi|322419445|ref|YP_004198668.1| hypothetical protein GM18_1929 [Geobacter sp. M18]
gi|320125832|gb|ADW13392.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M18]
Length = 297
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 88/286 (30%), Gaps = 2/286 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+P G F+ + + + + F ++ V++ R L + +F +
Sbjct: 1 MPRHKGAWFIVASAAGFATLGILIKSAFAGGANISTVLAGRFLLAGALLFCILRARGVNC 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + T +G + + L ++ VT + + F
Sbjct: 61 RLDRRTALQLILMGAVGYGGMSGLYANAIHFLPASLTGMLLYTYPALVTILALLVGDERF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ L + + L++L +LS+ A + + + +
Sbjct: 121 NAPKGIALVVCSVGLVLLLGASFEGARLEGVLSILGAAVIYSCYIIIGNRILKNLDPMVT 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V L ++ + G F L + F F G++ +
Sbjct: 181 SLWVCIAAGLAFLGYGLAKGELVFSLTTAGWLSIVGIAIFPTLFGVMGFFAGLRLIGATN 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ PL+ ++ S +L + I + +++ ++ +
Sbjct: 241 ASIISMLEPLITVLLSAILLGERITPTQGFGGAVLLFGGLILQIWG 286
>gi|190893171|ref|YP_001979713.1| hypothetical protein [Rhizobium etli CIAT 652]
gi|190698450|gb|ACE92535.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
Length = 305
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 82/285 (28%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A + WG + + + +S + + R ++ + V +
Sbjct: 6 YICLVIATLCWGGNSVAGKLAVGHISPMMLTFLRWFLAVALIALISV----PQLKKDWPI 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L + A + A+ + P++ L VF + ++
Sbjct: 62 ARKNLPLLLCYGAIGYTLFNAMLYSAVQYTTAINVAIEQAGIPMLIFLLNFVFFRTGISL 121
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + ++ + + H L L V +S Y + P
Sbjct: 122 AQCFGFAITLVGVALTAAHGDLATLLQLQLNQGDGLMLIAIVAYSLYTIFLRWKPRVDWR 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
A+ ++ + + L + ++ G++
Sbjct: 182 TLMAFPAFAAMLTSLPLLLWEAGRDAAQWPDQAGWGITLYTAIFPSLLAQILYIKGVEAI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ P+ + SV ++ + + + + + + + +
Sbjct: 242 GANRAGLFINLVPVFGTLLSVALVGETLQSFHMVSLALTLGGIAI 286
>gi|149201734|ref|ZP_01878708.1| hypothetical protein RTM1035_04320 [Roseovarius sp. TM1035]
gi|149144782|gb|EDM32811.1| hypothetical protein RTM1035_04320 [Roseovarius sp. TM1035]
Length = 306
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 94/297 (31%), Gaps = 8/297 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
S+ ++ G ++ IL+ G+T L +V + R L + +
Sbjct: 7 SRAESTARPGWGIFWMVVTGILFVGVTALVKVLGTRVPAPQAAFLRYAMGLVFLLPML-- 64
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L G + V + YA+ + ++ P+
Sbjct: 65 -----GSLWRLRLARGTWGFFAARGVVHTVGVALWFYAMARIPIADVTAMNYLAPIYVTL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FL ERL +++A + ++ LI+ + +A+ ++A F +
Sbjct: 120 GAGLFLGERLALRRVLAVGVALIGALIILRPGFREVGPGHLAMIFAAIFFGASYLIAKVV 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G V+A+ ++ + + + L L + + +
Sbjct: 180 SGRSSPGVVVAMLSITVTLGLAPLAAAVWVTPTPWELAILFAVATLATAGHYTMTLAFRA 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
A L+ + + + ++ + + +D + ++V A+ + +
Sbjct: 240 APLAVTQPVTFLQLVWAVLLGALVFGEGVDVFVVLGGMVIVGAVSFISWREAVLKRR 296
>gi|111220847|ref|YP_711641.1| hypothetical protein FRAAL1392 [Frankia alni ACN14a]
gi|111148379|emb|CAJ60051.1| hypothetical protein; putative integral membrane protein [Frankia
alni ACN14a]
Length = 303
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 86/284 (30%), Gaps = 15/284 (5%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F A +WG++ L + + L+V RV++ + + L +
Sbjct: 3 FGLLAT-IWGLSFLLVKVGTQGFPALQVAFGRVVFGAVALAGVVALRRDRLPRGLGLWAH 61
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
M + +A+ + + F T V L ER Q
Sbjct: 62 LAVAAMFLNAASFALFAFSAQRIPSALTGICNATTPLFTTLGTLVAL----PGERPARRQ 117
Query: 148 IIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ L+ L +L++ G+ L A A + + R+ + +
Sbjct: 118 LAGLLIGFLGVLVVFGVWDGATGQSITGMLLALAAAASMGVGWVYVRRFLTGSGCSSLAL 177
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L A+ + P L+ L F I ++ A +
Sbjct: 178 STGQLVAGAVELAIVTAAFSNPPASFPLRPLLAVLVLGVLGTGGAFLIQYGLVRDAGATV 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ Y P++ ++ V IL + + ++++ + L
Sbjct: 238 AATVTYVVPVVSTLAGVLILGESLSWNEPAGTVVILVGAALSQL 281
>gi|206974880|ref|ZP_03235795.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217959299|ref|YP_002337847.1| transporter, EamA family [Bacillus cereus AH187]
gi|222095437|ref|YP_002529497.1| transporter, eama family [Bacillus cereus Q1]
gi|229138510|ref|ZP_04267098.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST26]
gi|206746899|gb|EDZ58291.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217067258|gb|ACJ81508.1| transporter, EamA family [Bacillus cereus AH187]
gi|221239495|gb|ACM12205.1| transporter, EamA family [Bacillus cereus Q1]
gi|228644956|gb|EEL01200.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST26]
Length = 322
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 96/297 (32%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L + +S +++ R+L S + + +
Sbjct: 5 NRLKGIIMVVIGACLWGLSGTAAQQLFQYDNISTEWLVTIRLLISGVILLIISSFGTRKK 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 65 EIFSIWKQRSDATKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 125 WNVRPSKIDFISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKGLL 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + S E L + + +F
Sbjct: 185 ERWSSSVIVGWGMIIGGIGVTIVHFISTKEFILLSTVKYVKLSTLPLITFVVIFGTLIAF 244
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 245 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGALCVIVMVLILS 301
>gi|169632308|ref|YP_001706044.1| hypothetical protein ABSDF0368 [Acinetobacter baumannii SDF]
gi|169151100|emb|CAO99762.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii]
Length = 300
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 88/290 (30%), Gaps = 1/290 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASVFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + +F +
Sbjct: 69 PLKWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEQI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 SFKQWLCILLGLCGAVLVVSGDHGFGMPSPYSLLIILAAIAWGLYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ L + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTLPLLFYSAHLPSEILHATWQANMSVVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVIFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRT 298
>gi|126698995|ref|YP_001087892.1| hypothetical protein CD1393 [Clostridium difficile 630]
gi|115250432|emb|CAJ68255.1| putative membrane protein [Clostridium difficile]
Length = 296
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 104/283 (36%), Gaps = 6/283 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G +F+ + + + + + + + + + R L S F+ I+
Sbjct: 2 SSTIKSNRIKGIMFIIASALGFAMMSAFVKLAGDLPSFQKVFFRNLVSAIIAFWLIIKHK 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G L+ K+ LK +L++ + + F YA+ + ++P + V
Sbjct: 62 GSLTGKKENLK------VLLYRSIFGTLGVIFNYYAIDKLMLSDANMLNKMSPFLVVIFC 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ LKE++N QI A ++ + L + + + + A A +
Sbjct: 116 AIALKEKINVKQIGAIIIAFIGALFIIKPTFSVEVIPYLGGIAGAVFAAMAYTCLRVLGD 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ ++F +V G + + ++L+ G+ S + K A
Sbjct: 176 REDYYTIVFFFSVFSLVTVGPIAFAVYEPMTLMQLIYLLLGGVFASLGQFGITLAYKYAP 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ I +Y+ + + S+F+ D + + + IV A
Sbjct: 236 AKEISIFDYSNIIFSAILSIFLFNVYPDMLSVVGYLIVFSAAF 278
>gi|308388647|gb|ADO30967.1| putative integral membrane protein [Neisseria meningitidis
alpha710]
Length = 319
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 36 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 88
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 89 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 148
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 149 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 208
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 209 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPA 268
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 269 NVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 311
>gi|229000846|ref|ZP_04160344.1| Permease, drug/metabolite transporter superfamily [Bacillus
mycoides Rock3-17]
gi|229007858|ref|ZP_04165431.1| Permease, drug/metabolite transporter superfamily [Bacillus
mycoides Rock1-4]
gi|228753400|gb|EEM02865.1| Permease, drug/metabolite transporter superfamily [Bacillus
mycoides Rock1-4]
gi|228758904|gb|EEM07952.1| Permease, drug/metabolite transporter superfamily [Bacillus
mycoides Rock3-17]
Length = 295
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 106/284 (37%), Gaps = 18/284 (6%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A ILWGI T++ LE + ++ R+ ++ FS ++
Sbjct: 1 MLLIAIILWGIAIAPTKWALESIQPFTLLFLRLCFAGGICLL----FSFQQLRKSIVNRD 56
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ V S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 57 VPWKRISVLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEKIQLNY 116
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGSSE 194
I +L + ++ +T+ SG S ++ A ++ + +
Sbjct: 117 WIGIILGFIGVICITIPSGNDNQSDSLVGDILILLSTFLFAFYTILLKRPKQEKNLSNEV 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + AI + V F G F + ++ ++R
Sbjct: 177 FTTLTLIIGAIILFPFAVIETFYYGLPQIETWKTGLSFTYLVVCATILAYWFWNKALERV 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S G+ PL+ I++SV +LK+ + I +V+ ++
Sbjct: 237 SASVSGLYLNALPLISIIASVILLKESLTWKILIGGCLVLFGVI 280
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 47/131 (35%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
IA+ A + S + F + L ++++ + ++P
Sbjct: 4 IAIILWGIAIAPTKWALESIQPFTLLFLRLCFAGGICLLFSFQQLRKSIVNRDVPWKRIS 63
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + F SYGI V I++ PL+ I+ S LK+ I I +
Sbjct: 64 VLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEKIQLNYWIGIILG 123
Query: 294 VIAMVVYLLPT 304
I ++ +P+
Sbjct: 124 FIGVICITIPS 134
>gi|255658957|ref|ZP_05404366.1| transporter, EamA family [Mitsuokella multacida DSM 20544]
gi|260848912|gb|EEX68919.1| transporter, EamA family [Mitsuokella multacida DSM 20544]
Length = 296
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 91/296 (30%), Gaps = 17/296 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ I+WGI PL ++L V S + + + R + VY L
Sbjct: 6 RRKTYFLLAATTIIWGIQPLCIKWLVGVWSPVTITAMRYYLIGTTLLALSVYRGEHLLPP 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+D + G+++ AT + ++ L + +P I+ F+ +F++E
Sbjct: 66 RDCVL-----GLILMGATGIGLNNVMQFTGLAISTVTNCTLIAAASPAITAFMAVIFVRE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTIPV 190
RL+ L +L L L++ H + ++ W+ Y I
Sbjct: 121 RLSLLAWGGIVLSFLGALLVISHGSLAVIETTSFNEGDILFLLAQVAWTTYSLIALKIMR 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S L + L FL ++ G
Sbjct: 181 RMSALQTTGWAGLFGAFIVTGYGLATGQFAPIMLTPSLWVAFLYTVIFGGIMAMLFWNIG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ A S I + P++ ++ V + I + + + + +
Sbjct: 241 VHNAGASVTSIFQNITPVVGMIGGVLCFGEIIGIEELLGAAAIFAGVYLTTHSGLR 296
>gi|197106381|ref|YP_002131758.1| permease of the drug/metabolite transporter (DMT) superfamily
[Phenylobacterium zucineum HLK1]
gi|196479801|gb|ACG79329.1| permease of the drug/metabolite transporter (DMT) superfamily
[Phenylobacterium zucineum HLK1]
Length = 302
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/294 (9%), Positives = 84/294 (28%), Gaps = 10/294 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++G A + + ++ V + E+I R ++ + I
Sbjct: 12 THRPLLGIALRIGAMVCLALLWALVKWCGERGVPIFEIIFFRNAFAFLPLGLYI------ 65
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + + + A+ + F +P+ L ++
Sbjct: 66 WRTTGFEVLRTKRPMGHLVRSAVGLSGMVCGFSAVQHLPLTEATALQFASPLFMTALSAL 125
Query: 138 FLKERLNHLQIIAALLIILSLLIMT--LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L E + + A ++ + ++IM + + + + + + S+
Sbjct: 126 LLAEPVGRHRWGAVIVGFVGVMIMARPVPGHMNVPGVVFGLLGALGAAGAMVAIRQISDT 185
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
V + + + + L+ G++ + + ++ A
Sbjct: 186 ERGPTIVFYFTLAGSALGLAGAALFGWMTPDPLTLGMLVLSGIVGGVAQMLLTEALRAAP 245
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ V +YT + I + + +V + V L +
Sbjct: 246 IGVVAPFDYTQLVWAAGLGFLIWGELPHVATLVGALLVAASGVYILHRELRKFR 299
>gi|218898448|ref|YP_002446859.1| transporter, EamA family [Bacillus cereus G9842]
gi|218542599|gb|ACK94993.1| transporter, EamA family [Bacillus cereus G9842]
Length = 294
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 97/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G +++ +WG + +++ L+ + L ++ R + + ++F +
Sbjct: 2 KQTILGAIYLSLTASIWGGMYVVSKYILDFIPPLTLVWLRFIIAFVVLYFILKIA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKATIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIGELQTSSIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S + + P++ + +L + +++ I +++ ++ +
Sbjct: 241 DLMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGMLIICSVFITTFEK 293
>gi|323483478|ref|ZP_08088865.1| integral membrane domain-containing protein [Clostridium symbiosum
WAL-14163]
gi|323691015|ref|ZP_08105301.1| integral membrane domain-containing protein [Clostridium symbiosum
WAL-14673]
gi|323403176|gb|EGA95487.1| integral membrane domain-containing protein [Clostridium symbiosum
WAL-14163]
gi|323504954|gb|EGB20730.1| integral membrane domain-containing protein [Clostridium symbiosum
WAL-14673]
Length = 297
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/282 (10%), Positives = 84/282 (29%), Gaps = 8/282 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G ++ + + + ++ + + ++ R L ++ ++
Sbjct: 8 KGIFYIVLSAFCFAVMNMFVRMAGDLPSIQKSFFRNLVAVVFAGILLI-----RGEGGFR 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ G + + YA+ S ++P +V + LKE++
Sbjct: 63 WQKRSNAGYFFLRSLFGTLGILCNFYAVDHLVLADASMLNKMSPFFAVLFSFLILKEKVA 122
Query: 145 HLQIIAALLIILSLLIMT--LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q+ L + + + + I + T+ E +
Sbjct: 123 PAQVFIILGAFFGSMFVVKPTFLNLAFIPSLIGLAGGICAGLAYTMVRKLGESGEKGPFI 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + F + H+ T+ L+ G+ + + A + +
Sbjct: 183 VFFFSAFSCIVILPWLLLHYEAMTAAQTVILLLAGMAAAGGQFAITAAYCYAPAGRISVY 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLP 303
+Y+ + + F Q D +GI+ A+ ++L
Sbjct: 243 DYSQIIFSTILGFFAFGQIPDKWSFAGYGIICAMAVAMFLYN 284
>gi|319650291|ref|ZP_08004435.1| hypothetical protein HMPREF1013_01040 [Bacillus sp. 2_A_57_CT2]
gi|317397970|gb|EFV78664.1| hypothetical protein HMPREF1013_01040 [Bacillus sp. 2_A_57_CT2]
Length = 304
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/305 (12%), Positives = 100/305 (32%), Gaps = 12/305 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S + + + I + + + + + +R+L+S+ + +
Sbjct: 1 MSDKKINPYVALAIGVISVSTSAILVK-VSSAPSGVIAFYRLLFSVLFMLPVFLI----K 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + L + + + LA H+ + +L ++ + P+ + F
Sbjct: 56 YVPELRLITRRDWIYSIIAGVFLAFHFILWFESLNYTSVASSTVLVTLQPLFAFAGTYFF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
KE+ I++ LL I+ +I++ + IA
Sbjct: 116 FKEKFTWKAILSGLLAIVGSIIISWGDFQISGTALFGDILAIIACALVTAYLMFGQTVRK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
V +I + + + G F++ + +F++ +
Sbjct: 176 RMSLVTYTFVVYSISTVTLLFYVLMVNEPLIPYGTSDWVYFILLALIPTLLGHTLFNWSL 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K ST+ + P+ + + ++L + I + + +V+ + ++LL K
Sbjct: 236 KWLSTSTISMAILFEPVGAAILAYYLLHESIIWTQVLGGTVVIGGITIFLLDERRIRMKE 295
Query: 312 KTKKS 316
KK+
Sbjct: 296 LKKKT 300
>gi|238855437|ref|ZP_04645747.1| permease of the drug/metabolite transporter [Lactobacillus jensenii
269-3]
gi|282933056|ref|ZP_06338446.1| DMT family permease [Lactobacillus jensenii 208-1]
gi|313472725|ref|ZP_07813213.1| DMT permease [Lactobacillus jensenii 1153]
gi|238831927|gb|EEQ24254.1| permease of the drug/metabolite transporter [Lactobacillus jensenii
269-3]
gi|281302814|gb|EFA95026.1| DMT family permease [Lactobacillus jensenii 208-1]
gi|313448847|gb|EEQ68305.2| DMT permease [Lactobacillus jensenii 1153]
Length = 302
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 97/293 (33%), Gaps = 12/293 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ----VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ A + WGI+ L+ + L ++ + + R++ S +
Sbjct: 9 ILAAVACVFWGISGLFGKNLFNSNPLITPIFLTKIRMVISGIIILLFAAITKQ--KPFAI 66
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
A+ + + L F+ + + + FV P +F + ++
Sbjct: 67 WKNKKDALNVAAYGLLGLVPVQLFYFIVVKEANASIATILQFVGPFFVIFWMLITKQQVY 126
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+L +I+A L L + ++ H + L+L+ A + +
Sbjct: 127 RNLDLISATLAFLGVFLLATHGNLQTLTLSPGALLFGMLSAVGVATNTLIPRRLVSLYPT 186
Query: 204 AIPALFYVVWNGFSGGEHFF------LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
A+ + ++ G + + T + F + ++ S
Sbjct: 187 AVITGWGLLIAGIALFILNPSVPKISITFGMITDLSGVIVIGTLIPFQWMAGALRYISPS 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T +++ P+ ++ S+ + + + I I++ A+++ L + K
Sbjct: 247 TASLLDAFEPISAMIGSILVFNLALTPMDIIGSVIIIGAVLLVSLNPPRLTKK 299
>gi|119713628|gb|ABL97679.1| putative transporter drug/metabolite exporter family protein
[uncultured marine bacterium EB0_39H12]
Length = 289
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/285 (9%), Positives = 80/285 (28%), Gaps = 3/285 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+++ + I WG + L+ + +V + ++ R+L + + +
Sbjct: 1 MQKNSVIDWSLIIAIGIAWGSSFLFIKVSAPEVGPITLVFSRLLIAS--LILTPFFIRKS 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
P ++ + I L + +I+ +
Sbjct: 59 NLKNLKEDFLPILFLAFFNASIPFYLFSKAAIELNAGTMSVLNGTTPLFAFIIASLWLKL 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I + +++ + +L I + L + ++ + + +
Sbjct: 119 HSNLIQLVGIFIGIIGLVIFVGYESLEFSILAIILCLLASFLYAFSSNFIFKTKEIDPTY 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + + G HF + + L + + IKR
Sbjct: 179 LASMTLLVATFIVFPFTFLEDGLHFNHPDQVLLSVFLLGFLCTGLAYMGYVVLIKRVGPV 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ P+ ++ + L + I + + ++ + +
Sbjct: 239 KASTVVLIVPVSGMLWANIFLNEVITSTMLVGCLFIITGVGLVNF 283
>gi|72162026|ref|YP_289683.1| hypothetical protein Tfu_1625 [Thermobifida fusca YX]
gi|71915758|gb|AAZ55660.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 324
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 78/297 (26%), Gaps = 25/297 (8%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G F + + +G + + L + L V RV + +
Sbjct: 5 TRNRSSGLAFAIASALAFGGSGPVARPLIDAGLDPLHVTWLRVAGAALLLLPVAFRHHRT 64
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L +L + +A F+ A+ + F+ PV+ + +
Sbjct: 65 LRTRPAL--------LLAYGVFPMAGVQAFYFAAISRIPVGVALLIEFLGPVLVLLWTRL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
+ ++ + L ++ L + L + A + T + S
Sbjct: 117 VRRIPVSRAASLGVALAVIGLGCLVEVWAGIRLDAVGLILALAAAVCQATYFLLSDTARD 176
Query: 196 -------------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ L L L + + +
Sbjct: 177 DVDPLAVISYGALIATALLSLLARPWTLPWGILAQNVGFGGLDIPALILLVWLALVATTI 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++R G + Y + IV + +L + + + + VV +
Sbjct: 237 AYLTGVAAVRRLSPVVAGGVAYLEVVTSIVLAWLLLGEALSVAQLVGAAAVVTGAFL 293
>gi|50086263|ref|YP_047773.1| hypothetical protein ACIAD3273 [Acinetobacter sp. ADP1]
gi|49532239|emb|CAG69951.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter sp. ADP1]
Length = 300
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 88/292 (30%), Gaps = 1/292 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHNALHSYTPQHIALLRFLIASFFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + +F +
Sbjct: 69 PLKWKDAPALAVLGFFSVTLHHLLINTGQQYVSAVASSILSQSIPLFTFIISALLFKEKI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 VFKQWLCILLGLGGAVLVVSGDHGFGVPSPYSLMIVLAAIAWGLYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ + + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTIPLLFYSAHLPSEILHATWQANMSIVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y +P++ + +V L + + + ++V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVVFLNEKPSMIVLLGGVMIVGSLVWMNWGNRRTIK 300
>gi|257093977|ref|YP_003167618.1| hypothetical protein CAP2UW1_2400 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046501|gb|ACV35689.1| protein of unknown function DUF6 transmembrane [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 297
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 88/296 (29%), Gaps = 11/296 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAI 71
+ + + +G + + +G P++ + + V + ++ R + + +
Sbjct: 1 MIADPVARTRFVGLACIVASATGFGAMPIFAKLAYAAGVDLPSMLFLRFALAGLTMAAVM 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + + ++ + AL LT+ ++ P I
Sbjct: 61 QWRRLRWP------RGGNLLALMAMGGVGYLGQSFCYFAALQHATAGLTALLLYLYPAIV 114
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTI 188
L ++ + RL+ L+I+A +L + + L + +
Sbjct: 115 TVLSALLARRRLSLLRILAVAAALLGTGLAVGGSLAGSPIGILLGVGAALIYSVYILVGE 174
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V G V+ + A G F L F
Sbjct: 175 RVTPVAGAIPSATVIMLSAALGYGLIVLWRGPAFPTSPAAWAAVGGIVVLSTVVAMITFF 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ R + + P++ +V + L + + + I++ A+VV
Sbjct: 235 AGMARLGAADAATLSTLEPVVTVVLAATFLAEAVGGWQIAGGAIILAAVVVLARAG 290
>gi|86158625|ref|YP_465410.1| hypothetical protein Adeh_2203 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775136|gb|ABC81973.1| protein of unknown function DUF6, transmembrane [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 311
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 80/280 (28%), Gaps = 2/280 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G + +LWGI L + + ++ ++ R + ++ +L
Sbjct: 2 TRRGWILFVALCVLWGIPYLLIKVAVRDLTPASLVFLRTATGAVLLLPFVLVRGNLRPVL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +L + + L +
Sbjct: 62 ARWRPIALFTFGEMAVPWLLLADAERHVTSSLAGLVIAATPLVGALASRLSAGHEPLGAR 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R++ L + A ++ L L + + LA+ V A + +
Sbjct: 122 RMSGLAVGLAGVVALLGLDLGRGDARAVAELAVVVIGYALAPRIVARRLSDLPALDVVAV 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
LA+ AL Y + G + L + F +F I +
Sbjct: 182 SLAMCALAYAPF-GIAQLPAALPPAEALGAVAGLGVLCTALAFTLFFQLIAEVGPVRATV 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ Y P + + + V +L +P + F +++ +
Sbjct: 241 VAYVNPAVAVAAGVTLLGEPFTVGTAVGFALILGGSWLAT 280
>gi|262204227|ref|YP_003275435.1| hypothetical protein Gbro_4402 [Gordonia bronchialis DSM 43247]
gi|262087574|gb|ACY23542.1| protein of unknown function DUF6 transmembrane [Gordonia
bronchialis DSM 43247]
Length = 335
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 81/294 (27%), Gaps = 11/294 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD-TL 85
L +LW + + L S + R+L ++ + ++ S K
Sbjct: 18 LAATVTVVLWASAFVAIRALGDTFSPGSMAFLRLLAAVIPLSVVLLVVRRRSSTRKPLFP 77
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ + + +A + + P++ +F+ E
Sbjct: 78 RGRALAQVIAYGVAWFGGYMVLLNWAERHLDAGTAALLVNLAPILVAVYAGLFMGEGFPR 137
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
+ L ++++ L + + A + + S +
Sbjct: 138 HLVAGLALAFGGVVLIALGPSAGSSAHSDWLGIVLGLATAVLYALGVLLQKSALSSVDAL 197
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + E + + F ++Y + R +
Sbjct: 198 TATWLGALAGLVSTAPFAPVAVAELGDAAPADVWWVIYLGVGPTAIAFTTWAYALARTQA 257
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
ST+ P +++ S L + V + + ++ + V + +
Sbjct: 258 STMAATTLVVPAIVVGMSWLFLGELPTVVGLVGGALCLLGVAVARGLLRRRTPR 311
>gi|228918126|ref|ZP_04081637.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228931275|ref|ZP_04094206.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228937197|ref|ZP_04099889.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|229125242|ref|ZP_04254350.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
95/8201]
gi|229188148|ref|ZP_04315230.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
BGSC 6E1]
gi|228595325|gb|EEK53063.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
BGSC 6E1]
gi|228658214|gb|EEL13946.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
95/8201]
gi|228822469|gb|EEM68406.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228828387|gb|EEM74091.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228841528|gb|EEM86660.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 310
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+L++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLL----FSFKQLKRSVEH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I L + +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIALGGVGVLLITIPSSNVDQEVSLIGDILILLSTFLFAFYTILLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMAETFYYGFPKIETWKTGFSVMYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 244 TVSASVSGLYLNALPLISIVASIVLLDESVTWKIVIGGSLVLIGV 288
Score = 40.3 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L + ++++ +P
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLLFSFKQLKRSVEHKQVP 67
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I I
Sbjct: 68 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQLNYWI 127
Query: 289 VFGIVVIAMVVYLLPT 304
+ + +++ +P+
Sbjct: 128 GIALGGVGVLLITIPS 143
>gi|255036610|ref|YP_003087231.1| hypothetical protein Dfer_2851 [Dyadobacter fermentans DSM 18053]
gi|254949366|gb|ACT94066.1| protein of unknown function DUF6 transmembrane [Dyadobacter
fermentans DSM 18053]
Length = 299
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 115/295 (38%), Gaps = 9/295 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL-------S 79
L F ++++WG L + L+ L+++ +RV + ++ +
Sbjct: 7 YLVAFVSFLIWGFFSLALKPLKGYPSLDILFYRVFICAAVMAVISLFMRVRVLKESIAAF 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + +L +W FFIY + SF+Y V P+++ + L
Sbjct: 67 KGMPVARKREVAFLTLAGGVLLTANWFFFIYVMNHISVKAASFAYLVCPIMTTVIAFFVL 126
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L+ Q A +L +LS ++++ ++ +L I A+ + G + +
Sbjct: 127 DEKLSKWQWTAVMLSVLSCILLSFNNIADILYSLIVAASYAFYLVSQRKNTGIDKFLVLT 186
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ L + +S + + Y ++ ST+
Sbjct: 187 IQIIFSALLLLPFYPKYSAALPTEASFYILITL--IAVVFTIVPLFMNLYALQGVTSSTM 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
GI+ Y PL+ ++F +PI+ + + I+++++V++ + +
Sbjct: 245 GILLYINPLMNFAIALFYFHEPINATQITAYSIILLSIVIFNERFIFGRRRTAVA 299
>gi|163740479|ref|ZP_02147873.1| hypothetical protein RG210_10267 [Phaeobacter gallaeciensis 2.10]
gi|161386337|gb|EDQ10712.1| hypothetical protein RG210_10267 [Phaeobacter gallaeciensis 2.10]
Length = 305
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 92/291 (31%), Gaps = 5/291 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
G L + A +++ + ++ L + VI R + V G
Sbjct: 18 TQKNNVSAGVLLMIAATVVFAMQDGISRHLAGEYNTFMVIMVRYWFFALFVIALAARAPG 77
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G+ +G+ +F +L +YA + + P++ L
Sbjct: 78 GIRAT----ARTDQLGLQIFRGVLLVAEICVAVYAFTVLGLVESVAVFICYPLLVAALSG 133
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L E++ + A + ++ +LI+ LAI SA FA + +
Sbjct: 134 PVLGEQVGWRRWAAISVGLIGVLIILQPGVGVFDPLAIIPFVSALMFALYGLITRYAARR 193
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +V G ++ + D +++ L + + A+
Sbjct: 194 DSTATSFFWTGVAGMVAMTLVGIWYWEPMSQGDWMWMGILCLTGVTGHWLLIKCYEMAEA 253
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S V Y + V V + + I T I I+V A + L +
Sbjct: 254 SAVQPFAYFHLIWAAVLGVVVFGEVIRTNVAIGATIIVAAGLFTLWRERVK 304
>gi|163753640|ref|ZP_02160763.1| hypothetical protein KAOT1_18497 [Kordia algicida OT-1]
gi|161325854|gb|EDP97180.1| hypothetical protein KAOT1_18497 [Kordia algicida OT-1]
Length = 278
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 88/279 (31%), Gaps = 8/279 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
F+ + I + ++L + +++ R + +L ++
Sbjct: 3 KKAIQFMIISAIAFAFLNAVVKYLGDFNAYQIVFFRSIGTLAFTIPFLL--------KHK 54
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L+ + F +L +++P+ + LKE++
Sbjct: 55 ISIYGNKKTLLILRGIVGVTSMALFFMSLKYLPMGSAVSLRYISPIFAAVFALFILKEKI 114
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++Q + L+ +L++ + + SA+ I + + V+
Sbjct: 115 KYIQWLFFLIAFCGVLVLKGFDTQIGTTGLLLALASAFFSGLVFITIRKIGTDDHPVVVV 174
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ G ++ + L+ G+ + ++ A+ + ++
Sbjct: 175 NYFMIIALLAGGILCIPYWKTPIGWEWALLLSLGIFGYVGQLYMTKALQLAETNKAAPLK 234
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + ++ + + + ++VI + +
Sbjct: 235 YIEVIFTMLIGLSWFHESYTLWSVLGIILIVIGLTLNTY 273
>gi|262373485|ref|ZP_06066763.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262311238|gb|EEY92324.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 294
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 101/297 (34%), Gaps = 8/297 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
++ + + + + L+ I + ++ Q V ++ R L I+
Sbjct: 3 MTLNQPNRKLFLAISCLTISAFLFSIMGICIRYASQTVDNYTIVFFRNFVGLMLFLPFIM 62
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + M + + + F YA+ + + +P+
Sbjct: 63 -------KQGTSFVKTEKLWMHTWRSLVGLAAMYGFFYAIAHLKLSNAMVFTYSSPIFIP 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ +FLKER+ ++AA L L + + ++ S+ + + V +
Sbjct: 116 LIAWLFLKERITKAMLMAAALGFLGVFCVAKPDQGLWNWVSAIGIASSLLASMAFVTVRA 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ L V + + + + FLI G+L + S+ +
Sbjct: 176 LTKTEPPERIVFYFCLIGSVLSAIPMFWVWRPYALKELFFLIAAGILANVSQIFMSHAYR 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + + Y A + V F+ ++ D FG++++A+++ +
Sbjct: 236 LAPAGQIAPVNYMAIIFAGVWGFFLWQETPDFYSLFGFGLILLAIILCSPLSQRQRK 292
>gi|165976470|ref|YP_001652063.1| permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|165876571|gb|ABY69619.1| predicted permease [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 288
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 110/290 (37%), Gaps = 6/290 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L A L+G+ + L ++ + +R++ P + AI+ F +
Sbjct: 2 LKGILCCMSANFLFGLGYYFAILLRPLNGESMFGYRIVVLAPFILLAILLFKQTNKFQQL 61
Query: 84 TLK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K NP V +L+ A + F++A Q S Y + P+++V LG + K
Sbjct: 62 WQKIKQNPPLVLVLLLLALNTGIQLWLFLWAPNNGQAIEVSIGYLLLPIVAVALGKIVFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ ++ ++ + +G + +A +
Sbjct: 122 EHFTLLKWLSLGFAVIGVASNIWLTGSFSWATIVAGIGYPLYITLRRYFE--INTLATFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + F + + + N FL +GL+N F ++ ++ +G
Sbjct: 180 VELLLVMPFAGYFIDQTNMQPILANNQHIYYFLALFGLVNGAAFILYIASSNLLPVNVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ Y PL+M+ S I + +D+ ++ + +A+++ + + +
Sbjct: 240 LLGYVEPLVMLCVSFMI-GEVLDSKSYLLMICLALAIILLTVDNFRLTRR 288
>gi|52144959|ref|YP_081870.1| DMT family permease [Bacillus cereus E33L]
gi|51978428|gb|AAU19978.1| probable permease of the drug/metabolite transporter (DMT)
superfamily [Bacillus cereus E33L]
Length = 312
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 103/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+L++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLL----FSFKQLKRSVEH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I L ++ +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIALGVVGVLLITIPSSNVDQEVSLIGDILILLSTFLFAFYTILLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMAEAFYYGFPEIETWKTGFSVIYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 244 TVSASVSGLYLNALPLISIVASIVLLDESVTWKIVIGGSLVLIGV 288
Score = 41.8 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 51/136 (37%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L + ++++ +P
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLLFSFKQLKRSVEHKQVP 67
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I I
Sbjct: 68 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQLNYWI 127
Query: 289 VFGIVVIAMVVYLLPT 304
+ V+ +++ +P+
Sbjct: 128 GIALGVVGVLLITIPS 143
>gi|15966082|ref|NP_386435.1| hypothetical protein SMc01584 [Sinorhizobium meliloti 1021]
gi|307305636|ref|ZP_07585383.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
gi|307317639|ref|ZP_07597078.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|19110855|gb|AAL85313.1|AF472590_1 hypothetical transmembrane protein [Sinorhizobium meliloti]
gi|15075352|emb|CAC46908.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896797|gb|EFN27544.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|306902339|gb|EFN32935.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
Length = 300
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 97/302 (32%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + LF+ + +WG + + ++ + L I R + +
Sbjct: 1 MTRIQANLFLLFSGAIWGAGFVAQSTAMDAIGPLWFIGLRFAIATLVALPLALLEKKQ-- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T A+ VF L Y LLT + F + V L VFL
Sbjct: 59 --AATPLPRNAMRNFVFVGLALFGGAVTQQYGLLTTTVTNSGFLTGLYVVFVPVLTVVFL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ R + + AALL + +++ + G +L++ A+ W+ +
Sbjct: 117 RRRPHWVIWPAALLAAFGIFLLSGGALSALTGGDMLTIVCALFWAVQLMLVGLFAPATGR 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ M A+ A+ V G N L + F G +
Sbjct: 177 PMLLSMTQFAVCAVAGCVLAGLFEPLSLDAINGALPQILYAGIFSSGIAFICQVVGQRYT 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I + L + V +L + I V + ++ +AM+ L + + +
Sbjct: 237 TAPQAAIFLSSEALFAALFGVLLLGETITPVGYVGCAVIFLAMLAVELVPELTKKRREAA 296
Query: 315 KS 316
++
Sbjct: 297 QA 298
>gi|84385191|ref|ZP_00988223.1| transporter, drug/metabolite exporter family [Vibrio splendidus
12B01]
gi|84379788|gb|EAP96639.1| transporter, drug/metabolite exporter family [Vibrio splendidus
12B01]
Length = 284
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 16/281 (5%)
Query: 30 VFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + + +++ + V E+++ R L SL + + K
Sbjct: 1 MILSAFGFALMSACVKYVSNYGIPVFEIVAARALVSLIISYIDV--------KRKRISIW 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L + YA+ T + +V PV + LG +FLKER+
Sbjct: 53 GNNKPLLFVRGAVGTAALMCVYYAVTTLPLAEATILQYVHPVFTALLGVLFLKERVQKST 112
Query: 148 IIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+I + ++ L +M S L + A+ + + V
Sbjct: 113 MICIVFCLVGLSVMVQPSMNSGASSELPLFSIMLALCGAFGSSIAYVIVRKLSQTEDSSV 172
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ L + + F ++ T+ L+ G+ + ++
Sbjct: 173 IIFYFPLVALPISTALIWNDFVWPSLFLTMMLVLVGIFTQIGQFGLTKAMQTQAAGKASA 232
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + + V++ + + ++V ++ +
Sbjct: 233 YSYVQIVFSALLGVWVFNEIPSVWTYLGGSLIVTGALINVF 273
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 25/62 (40%)
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
Y + L+ I++Y P+ + V LK+ + I ++ + V + P
Sbjct: 70 LMCVYYAVTTLPLAEATILQYVHPVFTALLGVLFLKERVQKSTMICIVFCLVGLSVMVQP 129
Query: 304 TV 305
++
Sbjct: 130 SM 131
>gi|297581634|ref|ZP_06943556.1| LOW QUALITY PROTEIN: RarD protein [Vibrio cholerae RC385]
gi|297534041|gb|EFH72880.1| LOW QUALITY PROTEIN: RarD protein [Vibrio cholerae RC385]
Length = 240
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P+ +L+ +A ++ +W FI+++ S Y++ P+++V LG +FL ERL
Sbjct: 10 HTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGERLRK 69
Query: 146 LQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ A L + + I + + +P++++A+A ++ Y RK I V + G F+E +
Sbjct: 70 LQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLETLFML 129
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A Y++W + L L L+ G++ + F+ R KLST+G +Y
Sbjct: 130 PAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGIVTTLPLLCFTGAAARLKLSTLGFFQY 189
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P LM + +V + + + + I F + A+V++ + + + +
Sbjct: 190 IGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRAR 240
>gi|149180063|ref|ZP_01858568.1| hypothetical protein BSG1_03570 [Bacillus sp. SG-1]
gi|148852255|gb|EDL66400.1| hypothetical protein BSG1_03570 [Bacillus sp. SG-1]
Length = 279
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 93/277 (33%), Gaps = 10/277 (3%)
Query: 38 GITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
G + + LE VS L ++ R + + A+ F VG L
Sbjct: 2 GSSFAVGKIGLEYVSPLMLVGLRFTIAGILMALAVKVFKRPHPAQFKEWSKIILVGSLQT 61
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
+ + ++ +L T +S F P++ V G++F+ + LQ + L+ IL
Sbjct: 62 AGVMGSI-----FLSLRTITAGESSILTFTNPLLVVVFGTLFMGMKYRKLQWLGVLMGIL 116
Query: 157 SLLIMTLHSGIPLLSLAIAVT----WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ I S I + A S + + + + + ++
Sbjct: 117 GVFITLGASLDIQEVGFILGLMSAVFWASATLVMKKWGQSFDTWVMTAYQMLFGGILLLL 176
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ + + + + + F I+ Y +K+ + V + APL ++
Sbjct: 177 ISVLFEPVEIIFTSTSIGIIMWLAIMASIVQFAIWFYLLKKEDPAKVSSFLFLAPLFGVI 236
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +L + + I+++ + + P
Sbjct: 237 TGWLLLDEQLHLTTLAGGSIILLGIYLVNKPQKKRGK 273
>gi|146342767|ref|YP_001207815.1| DMT family permease [Bradyrhizobium sp. ORS278]
gi|146195573|emb|CAL79600.1| Putative transport protein; putative permease of the
drug/metabolite transporter (DMT) superfamily
[Bradyrhizobium sp. ORS278]
Length = 314
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 83/293 (28%), Gaps = 16/293 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A + W + +++ V L + R + + ++ +
Sbjct: 19 YLLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGTFLMLWPFARAHL----VRDWRT 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+LV + T A++ +A+ Q P+ V RL
Sbjct: 75 LLASWPLLLVLALTGFAINNALSYWAMQYTQALNGLLIQSSAPLFVALWSLVLFGVRLTA 134
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + + +L++ L L+ + + Y P
Sbjct: 135 AQFAGIAMSLTGVLVILLRGDLGALAAIQFNRGDLMFAGALLVFGIYSAVMTRRPAVHQL 194
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
L L + ++ G L + ++ + F+ GI
Sbjct: 195 SLISSCTALGALLLLPLAAWEYTSGFVLQLDLLSILTLGYVVVFASTLAYLSFNRGISLI 254
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + PL V ++ +L + + + +V+ +++ +
Sbjct: 255 GPNRAAPFLHLVPLFGSVLAILLLGEELKPFHLAGYALVIAGVIIASRVPLRQ 307
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 44/144 (30%)
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
+ + P L L +A + A G + L +
Sbjct: 11 LAWLNNQPYLLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGTFLMLWPFARAHLVR 70
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ L L+ + + + ++ + +++ +APL + + S+ +
Sbjct: 71 DWRTLLASWPLLLVLALTGFAINNALSYWAMQYTQALNGLLIQSSAPLFVALWSLVLFGV 130
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + + ++V LL
Sbjct: 131 RLTAAQFAGIAMSLTGVLVILLRG 154
>gi|229825391|ref|ZP_04451460.1| hypothetical protein GCWU000182_00747 [Abiotrophia defectiva ATCC
49176]
gi|229790395|gb|EEP26509.1| hypothetical protein GCWU000182_00747 [Abiotrophia defectiva ATCC
49176]
Length = 285
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 88/268 (32%), Gaps = 13/268 (4%)
Query: 37 WGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + L+++S ++ R L + + K T +
Sbjct: 17 WGGGFVASDIALKELSPFTIMFFRFLIAAVLMGLLA--------NKKITTITKDELLCGF 68
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T L + I L +F ++ + +++L+ I+ +++ +
Sbjct: 69 VLGTALFAGFALQIVGLKYTTPSKNAFLTATNVILVPIIAYFIGRKKLDKKSIVGSIMAL 128
Query: 156 LSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
+ + I++L S GI L + A+ + + + +
Sbjct: 129 VGVGILSLQSDFSVGIGDLLTLLGAVGFAFQIYLTGVFAERIRPSILNFLQMLTAFILSF 188
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ FSGG + + + + + + + + + I+ +
Sbjct: 189 LGLLFSGGIILDVSRQGIYAIIYLGAISTTLCYFLQTTSQQYVDETKAAIILSMESVFGT 248
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ SV IL + I I +++ A+++
Sbjct: 249 LFSVLILSEKITPRMIIGGIMILSAVLI 276
>gi|229017970|ref|ZP_04174846.1| Uncharacterized transporter [Bacillus cereus AH1273]
gi|229024190|ref|ZP_04180655.1| Uncharacterized transporter [Bacillus cereus AH1272]
gi|228737105|gb|EEL87635.1| Uncharacterized transporter [Bacillus cereus AH1272]
gi|228743239|gb|EEL93363.1| Uncharacterized transporter [Bacillus cereus AH1273]
Length = 303
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/276 (13%), Positives = 90/276 (32%), Gaps = 13/276 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
I+WG + LE + + R+L + +F + + L LKD
Sbjct: 15 IFTIIIWGTAFPGIRMGLEAYTPEHLTLLRLLIASLILFLFSLIYKLRLPDLKD------ 68
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y + SF +TP+++ L SVFL E++ I
Sbjct: 69 IPVIFIFGALGFTIYHIALNYGEKSVNAGPASFIVSITPILTAILASVFLNEKMKFNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ ++ + ++L G + + +A + F + + + +
Sbjct: 129 GGVISLIGIAFLSLSQGDSIQLNSGVLLILLAAFSESLFFVFQKSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + +Y + S
Sbjct: 189 WSGTVCMLIFLPGIYEEIVAAPIEITLSVIYLGVFPTVLPYIALAYITSHSGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P+ + L + V + + ++ +V+
Sbjct: 249 YLTPVTACFIAWVWLGEVPTFVSIVGGIVTILGVVI 284
>gi|90577684|ref|ZP_01233495.1| Permeases of the drug/metabolite transporter (DMT) superfamily
protein [Vibrio angustum S14]
gi|90440770|gb|EAS65950.1| Permeases of the drug/metabolite transporter (DMT) superfamily
protein [Vibrio angustum S14]
Length = 307
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 90/301 (29%), Gaps = 14/301 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M+G + A + I ++L ++++ R + +
Sbjct: 6 NNMLGAFLIIIATLSLTIKDSADKYLIQHGYHPVQMVFFRFAIPFVFMLIFM-------- 57
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ G L+ + + + +L + ++ V + G++F
Sbjct: 58 PKQTKTAILVTNGKLLIRSAMFLTCAVVSVISLKYIPLEIYIVIVQMSSVAYMLGGAIFF 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----AIAVTWSAYCFARKTIPVGSSEG 195
KE L +IIA +L + ++++ + + L + + + + T + S
Sbjct: 118 KETLTLPKIIATILGFIGVVVVINPTNVDGLHWVYLLPLLIAATTSGYNLITKTIDSKIS 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + I + + ++ + A+
Sbjct: 178 LISVLINSFFILGSVATILLIVQPDIWKTPTITALPYFLTIPIVTIVSQLCLIKAMNVAE 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S V Y L V ++ + T I +VI+ ++ S K+
Sbjct: 238 ASHVAPFFYFQILFSCVFGYWLFNEIPTTYTIIGALFIVISGLIITYTNYKPSWGKAKKQ 297
Query: 316 S 316
S
Sbjct: 298 S 298
>gi|319639421|ref|ZP_07994171.1| RarD protein [Neisseria mucosa C102]
gi|317399316|gb|EFV79987.1| RarD protein [Neisseria mucosa C102]
Length = 301
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/292 (16%), Positives = 114/292 (39%), Gaps = 4/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + +L+ + LY ++ ++ EV + R++ L + + +G + ++
Sbjct: 6 KGLLAAVASNLLFSMLFLYGMWMRPMTGTEVFAWRMVAMLSALCVLMTMVNGWQAAMRFA 65
Query: 85 L---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ K ++V I A F++ + +G + YF+ P+ + G ++ KE
Sbjct: 66 YGVGRDWKRWLLIVLPTPIFASQLWLFVWGPVNGEGVNIAMGYFLFPLAMMLGGRIWFKE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RLN LQ +A +L + + SG + V + + +G +
Sbjct: 126 RLNRLQRVAVILACAGVACELVRSG-AFSWTTVWVFGTYPFYYLLRRKLGVPSLIGLTFD 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ I + F++ G ++ + + ++ G+
Sbjct: 185 LMMITPFALAYIVLATDTPAMIAAKPVLIFFIVLLGFNSAISMHLNLKANQLLPVAVFGM 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ Y P+L+ + S+ L +P+ I +G++ + V + ++ K K
Sbjct: 245 LSYLEPVLLFIVSIVWLGEPVQGGALIGYGLIWSGLCVMIANGLLGMKKEKK 296
>gi|332703240|ref|ZP_08423328.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
gi|332553389|gb|EGJ50433.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
Length = 329
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/303 (11%), Positives = 96/303 (31%), Gaps = 17/303 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + +F + +LWG + + + + + VI R+ + +++ +
Sbjct: 26 PSERSLRLAHASLFASTVLWGASFIAMKIAVTAYGPMPVIWGRMAIAS------LIFMAC 79
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
SL + + +L+ + +++ F YA+ + P+
Sbjct: 80 SRSLRRVVFQLRDIWAILLMALFEPCLYYLFEGYAMHYTTASQAGTVSAILPLTVAVGAH 139
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSG----------IPLLSLAIAVTWSAYCFARK 186
L E + ++ L+ + + +++L L V+ + Y K
Sbjct: 140 FMLAENIRASVVVGFLVSLAGVAVLSLGGSATEDAPNPVLGNFLEFMAMVSATGYMLLVK 199
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ S + M + F + + P + ++ + +
Sbjct: 200 RLSARHSPWYLTAMQAVCGAVFFLPAFLWHAPEIPANFAWAPTLAVVFLGTIITVGAYGL 259
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++YG+ S P++ + +L + TV+ + G+V I +
Sbjct: 260 YNYGMSILPASQAAAYVNLIPVVAVALGWLMLGERFTTVQFLGAGLVFIGIYCSQGRGFT 319
Query: 307 NSG 309
Sbjct: 320 RRK 322
>gi|320106104|ref|YP_004181694.1| hypothetical protein AciPR4_0867 [Terriglobus saanensis SP1PR4]
gi|319924625|gb|ADV81700.1| protein of unknown function DUF6 transmembrane [Terriglobus
saanensis SP1PR4]
Length = 308
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 93/293 (31%), Gaps = 19/293 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G CA LWG + + L ++SV ++ +R +++ + ++
Sbjct: 8 LGFAACGCAGALWGTGFFFGKIALREMSVGHMVFYRFFFAIVALVPLLILHRPTFD---- 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + S + + + F L S PVI +VF ER+
Sbjct: 64 ---RRAWGWLALGSFLGVPLQFLFQFKGLSLTTVAHASLMVGTMPVILAVGAAVFAHERM 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLL-----------SLAIAVTWSAYCFARKTIPVGS 192
+ L + + ++ L + ++ + +K + +
Sbjct: 121 DLLGWTSLAVSTCGATLIALGASHSTHGGPTVAGDLLVVFSLCIALFWILINKKLMAHHT 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S + L + + L + ++++G++
Sbjct: 181 SIAVTAWGLLAGFVMLAVWTPLAYGLPPVHGISARAWMALAASGVLCTAATTMLWNWGMQ 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ S G+ PL+ V + +L + + + ++V+A VV +
Sbjct: 241 QVPASQAGVFLNLEPLMGSVLGILLLHETLGPSAWVGGTMIVLAAVVLTTRSR 293
>gi|221369323|ref|YP_002520419.1| drug/metabolite exporter (DME) family protein [Rhodobacter
sphaeroides KD131]
gi|221162375|gb|ACM03346.1| drug/metabolite exporter (DME) family protein [Rhodobacter
sphaeroides KD131]
Length = 307
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 83/292 (28%), Gaps = 2/292 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L V A +LWG T L L V + R+ + + +
Sbjct: 8 LLCVILAAVLWGTTGTVQSLLPPEREPLIVAAIRLAVGATLLTLMALRLPESRRAFRRLP 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQG-FLTSFSYFVTPVISVFLGSVFLKERLN 144
P V L L + + S +VT + LG + R
Sbjct: 68 WRPVLVAGLAIGLYNLLFFVAVTQAGVGVGTAIAIGSAPVWVTLYEAAVLGRLPTGVRGA 127
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +L + + +LA A + ++ T VG+
Sbjct: 128 GQVLSVLGAALLVAQAGAGSASLTGAALAAAAGAAYATYSVATGRVGAQVPSDTLAAATF 187
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ F + L + + +F+ G+ ST +
Sbjct: 188 GVAMLLAAPALFLLPVSWVADLRAWPALLFLGAVTTGVAYALFTRGLAGLTTSTAVTLSL 247
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
PL + ++ +L + + R + ++ + + L + + ++
Sbjct: 248 VEPLTAWILAIVVLGEAVTAQRLLGAALLFAGLAIVTLAPARPAVRATRGEN 299
>gi|51830494|gb|AAU09774.1| YMR253C [Saccharomyces cerevisiae]
Length = 414
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 37/312 (11%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS----------VLEVISHRVLWSLPGVFFAIVYF 74
+G + + +Y + T+ LE L+++ R++ + G +
Sbjct: 69 IGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYIN 128
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+S + P+ LV Y+L+ F+ P +++FL
Sbjct: 129 KSTISDVP--FGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFL 186
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------------------- 172
V L+ER ++ + +L+ +L ++++ S +
Sbjct: 187 SWVILRERFTKVEALGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRLIATL 246
Query: 173 ---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ S + I + + L + ++ N + +
Sbjct: 247 VGLWGVLGMSCVYIIIRYIGKRAHAIMSVSYLSLITAIVSFIGINTIPSMKFQIPHSKKQ 306
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + + GI+R + +M YT L + V + K + I
Sbjct: 307 WILFGNLGVSGFIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIG 366
Query: 290 FGIVVIAMVVYL 301
I++ A + +
Sbjct: 367 MIIIISATLWVI 378
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 48/152 (31%)
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ L+++T+ + + V+ ++
Sbjct: 68 NIGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYI 127
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S G +L+ G F Y + +S ++ + AP L I S
Sbjct: 128 NKSTISDVPFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLS 187
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
IL++ V + I ++ +V+ + P+ +
Sbjct: 188 WVILRERFTKVEALGSLISLLGVVLIVRPSFL 219
>gi|196045303|ref|ZP_03112535.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|196023887|gb|EDX62562.1| transporter, EamA family [Bacillus cereus 03BB108]
Length = 330
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/300 (14%), Positives = 94/300 (31%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYAELGIQPKEVGEQILFAGYRFFLSGVMLLLFFKVLGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 88 MSFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 143 LYKDDALNMRKVIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L+ L++ FCI++
Sbjct: 203 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSVHAIFMLMYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVATGIIVVNRAPAKQK 322
>gi|325830790|ref|ZP_08164174.1| putative membrane protein [Eggerthella sp. HGA1]
gi|325487197|gb|EGC89640.1| putative membrane protein [Eggerthella sp. HGA1]
Length = 331
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/301 (7%), Positives = 69/301 (22%), Gaps = 17/301 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + LWG + QFL ++ + + R+L + ++ +
Sbjct: 13 RRRHLKGVVCALVGAGLWGFSGACAQFLLANYDITPSFITAVRMLGAGAVFLLVLLVRNR 72
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + VF L + + + + +
Sbjct: 73 AQLAAMLGDR-RTLGQLAVFGGVGLFLCQITYTIVIGYTNAGTATVLQTTGIAFVMLFTC 131
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTI 188
V + ++ +++ ++ + L A+
Sbjct: 132 VLTRRMPRGREVTGLAAAVIATWLIATQGDPSALYLPPMGLAWGIANGLSVAFYIMYPKK 191
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F + + I + L V +
Sbjct: 192 LFARWGSFAVTGIGMFIGGIVAAAVYFGGVALGEPLALPALDAAGAAVFAAFVLVGTFAA 251
Query: 249 YGIKRAKLSTV-----GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + +S V ++ P+ + + L +++ + +
Sbjct: 252 FALYLHGVSVVGSVQGSLLGAVEPVSATLFATLWLGTAFTGADLAGCALMIAMIFLVTGE 311
Query: 304 T 304
Sbjct: 312 K 312
>gi|298373067|ref|ZP_06983057.1| integral membrane protein DUF6 [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275971|gb|EFI17522.1| integral membrane protein DUF6 [Bacteroidetes oral taxon 274 str.
F0058]
Length = 306
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/300 (14%), Positives = 102/300 (34%), Gaps = 6/300 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + A I WGI+ ++T+ L +V+ VI+ R+L S + +
Sbjct: 4 KKIFKAYIALILAQIFWGISFVWTKELLNHNFNVVFVITVRLLISFALLLAIAMATKQLE 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ ++ + + ++G + F+ V + F
Sbjct: 64 KIRREDYGKFFLLAFFEPFLYFIGENYGLKLVDASYAAIFIAIIPIIVPFGLFFFYKKKI 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L + I + I+SL + + G+ LL LA+ + +
Sbjct: 124 SWTVLLGVFISIVGIAIISLGNSVVGTFNVTGVLLLLLAVFSAVGYNMMLFRLLHYKPIT 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + A+ + + S ++ +S F +SY +K
Sbjct: 184 IIIYQNIIAAVLYVPMFLTVDKSELAAMQWTPYTVLALVMLAVFCSSIAFMGYSYAVKNI 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++S + P++ I+ +V I ++ + + I +V+ +++ + + +K
Sbjct: 244 EISRANVFTNAIPVITIMFAVIIGQETLTFNKIIGMIVVLSGVLISQMISKKKETTDKQN 303
>gi|296100416|ref|YP_003610562.1| carboxylate/amino acid/amine transporter [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295054875|gb|ADF59613.1| carboxylate/amino acid/amine transporter [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 301
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/298 (16%), Positives = 102/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R+L++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEKSQISSPYLTMVRLLFT--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L FS F+ + + F++P I V ++
Sbjct: 61 KIFSVIKHRKDALSLLFFSLAGALTVQLTFLVTIEKSNAATATVLQFLSPTIIVAWFALA 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K+R + A L ++ ++ H L IA ++A + +
Sbjct: 121 RKKRPGLFVLSAILTSLVGTFLLVTHGDPTSLSISPAALFFGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + A + G F + F + + F ++ G
Sbjct: 181 ARYGTLPIVGWSMLIAGLTLTPFYAGRGTAFVIDGSLLLAFFYLVVIGTALTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + SV +L + ++V ++V+ + +
Sbjct: 241 QMIGGPKASILSCAEPLSSALLSVILLGVAFTLPDWLGTLLIVSSVVLISMDSRKRVK 298
>gi|229154285|ref|ZP_04282405.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 4342]
gi|228629109|gb|EEK85816.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 4342]
Length = 310
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGLFILSFLLIQK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHSRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPT 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + LI + + F +
Sbjct: 181 SLIKECGTTIVIGWGMLIGGIALLICNRSFGWSQLSQTFTPKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + ++++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIILSVIFLTMPQ 298
>gi|224541034|ref|ZP_03681573.1| hypothetical protein CATMIT_00185 [Catenibacterium mitsuokai DSM
15897]
gi|224526031|gb|EEF95136.1| hypothetical protein CATMIT_00185 [Catenibacterium mitsuokai DSM
15897]
Length = 288
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/281 (11%), Positives = 75/281 (26%), Gaps = 3/281 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG + ++ V + R + I +F + K
Sbjct: 7 LLLLLTAFIWGCAFVAQSAGMDYVGPFTFTALRSYLGGLVLLPLIYFFDHTMDFKDK--K 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + F I + + Y + L ++
Sbjct: 65 LWAGGIACGIVLGLASALQQFGIQYTTVGKAGFITALYIIVVPFFSLFLGKKLSPKIGIS 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++A + + L + +L G L + A +G +
Sbjct: 125 VVLAVIGLYLLCMTGSLSLGKGDLLVCACACVFALHILVIDHYSPLVDGVKMSCIQFFTC 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
AL + L L + + + G K + I+
Sbjct: 185 ALLNTIPMFLFEDVSMHNIMAGCVPILYAGLLSSGAGYTLQIIGQKGMNPTVASILLSME 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ +++ IL Q + + ++ IA+++ LP
Sbjct: 245 SVFSVLAGWVILGQSLTIKEGLGCVLMFIAIIIAQLPDKKT 285
>gi|49479856|ref|YP_034840.1| DMT family permease [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|196046782|ref|ZP_03114004.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|225862552|ref|YP_002747930.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|228944335|ref|ZP_04106708.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|49331412|gb|AAT62058.1| probable transporter, DMT family [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|196022317|gb|EDX61002.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|225790814|gb|ACO31031.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|228815237|gb|EEM61485.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 308
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 105/298 (35%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + ++ +++FS + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPR--YSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKFPAPIQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQ 296
>gi|327485320|gb|AEA79726.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio cholerae LMA3894-4]
Length = 297
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 85/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQVSAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMCFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILDEPIGLNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|300788141|ref|YP_003768432.1| hypothetical protein AMED_6296 [Amycolatopsis mediterranei U32]
gi|299797655|gb|ADJ48030.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 315
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/299 (11%), Positives = 87/299 (29%), Gaps = 21/299 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
GT +V A + + + + + ++ +V + R+ + + + + K
Sbjct: 18 RGTSYVLLAALFFSTSGTLGKSVMSAGIAPEQVAAARIALAGVVLLAGVALV----APRK 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
++ + + + +A + A + FV+PV+ + R
Sbjct: 74 LRVRRAELPVLAGYGLLGVAGVQLLYFVAAGRIPVGIAILLEFVSPVLIALWVRFVRRHR 133
Query: 143 LNHLQIIAALLIILS------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L L + + G+ LL+ A SA F V +
Sbjct: 134 LPRAVWGGIALAMAGLALVAQVWEGVTLDGLGLLAGFGAALCSAGYFLLGERAVADIDPL 193
Query: 197 FIEMCVLAIPALFYVVWNGFSGGE---------HFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + I A+ L + + +
Sbjct: 194 GLVTWGMVIGAVAISFVAPPWTWPAGLLGADVGFGAWHPPVWLLLTLLVLVATVLAYVCG 253
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ S ++ P++ V++ +L + + + + I++ + + I
Sbjct: 254 ISSLRHLPASVASVLGLIEPVITTVAAWVLLGEQLAWPQLLGSAILLGGAYIVQRNSEI 312
>gi|325681364|ref|ZP_08160890.1| putative membrane protein [Ruminococcus albus 8]
gi|324106854|gb|EGC01144.1| putative membrane protein [Ruminococcus albus 8]
Length = 297
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 91/299 (30%), Gaps = 8/299 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+++ + + + L+ + ++ + R L++L ++ S
Sbjct: 3 KKKYKAVIYIVLSAFCFALMGLFVTKSGDLPTMQKVFFRNLFALFIAIGSL-----KKSG 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + + K +L A + YAL ++P + +FLK
Sbjct: 58 TKFEIGDKKNHAVLFVRAFGGTIGMIGNFYALGKMNLSDALMLNKMSPFFVIVFSYIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+L Q++ L L + S + + A G
Sbjct: 118 EKLTRFQLLTVLGAFGGSLFIIKPSFSNVDLFPAICGFLGGMGAGLAYTCVRYLGQHGVK 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKRAKLST 258
+ + F + FL G+ + + A
Sbjct: 178 GPVIVAYFSGFSCLFTLPFLIFQFKPMTLAQFLCLLGAGISAAGGQFSITAAYSHAPAKE 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKTKKS 316
+ + +Y+ + + + L Q D + + I++ A++V++ ++ + K+
Sbjct: 238 ISVYDYSQLIFTTILGMIFLHQFPDKWSFVGYIIIITMAVLVFIYNNFLHKASDAENKT 296
>gi|226948614|ref|YP_002803705.1| putative transporter [Clostridium botulinum A2 str. Kyoto]
gi|226843567|gb|ACO86233.1| putative transporter [Clostridium botulinum A2 str. Kyoto]
Length = 324
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/302 (10%), Positives = 80/302 (26%), Gaps = 11/302 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G + V A + WG + T+ L + S+P +F+ I F SL K
Sbjct: 8 KKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFKKDPSLFK 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV-FLGSVFLKE 141
K + LL V+++ +
Sbjct: 68 VDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEKFT 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR----------KTIPVG 191
+ ++ L+ + M L S I + +
Sbjct: 128 TQKAISMLLILIGCFMMCEMHKLGSFNLSSKGIFWGLISGFTFALQILLAKVSNEKYHYN 187
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ AI ++ + + + +
Sbjct: 188 HNSLLTYSFLFAAIFLFPFMDMKNNIHIFKSSNNLFFLFKNIFWSVVGTLIANTAYVKSV 247
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + S ++ ++ V + Q ++ V+ + ++++++++ + +
Sbjct: 248 EYIEASIASMVSSLELVIASVLGFIVFNQALNLVQILGMALILVSIILLEVKKSVLLKLF 307
Query: 312 KT 313
K
Sbjct: 308 KR 309
>gi|15672884|ref|NP_267058.1| hypothetical protein L124727 [Lactococcus lactis subsp. lactis
Il1403]
gi|281491404|ref|YP_003353384.1| drug/metabolite exporter family transporter [Lactococcus lactis
subsp. lactis KF147]
gi|12723834|gb|AAK05000.1|AE006324_3 hypothetical protein L124727 [Lactococcus lactis subsp. lactis
Il1403]
gi|281375138|gb|ADA64654.1| Transporter, drug/metabolite exporter family [Lactococcus lactis
subsp. lactis KF147]
gi|326406448|gb|ADZ63519.1| transporter, drug/metabolite exporter family [Lactococcus lactis
subsp. lactis CV56]
Length = 310
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 89/296 (30%), Gaps = 11/296 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
K N GTL+ A +WGI+ ++ Q S L + S R+ + +
Sbjct: 11 KMNVKKQIFKGTLYAVVAGCMWGISGIFGQLFFRDYHGSPLWITSTRLTIAGIILLAMS- 69
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + ++ + F+ A+ + + PV +
Sbjct: 70 FSRDHKRFFDVWKSKKNMPTLFLYVFGGVFSVQYFYYVAIQLSNSATATILQYTAPVFIM 129
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFAR 185
+F ++ ++ +L ++ + ++ L + + ++
Sbjct: 130 LYLLIFQRQVPKPKSVLFVILAMIGVFLLITDGNIKHLSISPLALVTGLLAGVAVVIYSI 189
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
P+ G + A F + + L + + F
Sbjct: 190 IPRPLLDKYGALNMTGWGMMLAGIACNIFYPVWRIDFRIEPLSIFYVLTISIVGTALAFL 249
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + V + T PL + S+ + + + + +V++++++
Sbjct: 250 LLLRAFQLISPLVVSVATATEPLTSVFLSIPLFGLKLTPLELLGIVMVIVSVILLS 305
>gi|297564627|ref|YP_003683599.1| hypothetical protein Mesil_0146 [Meiothermus silvanus DSM 9946]
gi|296849076|gb|ADH62091.1| protein of unknown function DUF6 transmembrane [Meiothermus
silvanus DSM 9946]
Length = 293
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 78/295 (26%), Gaps = 7/295 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L++ +LWG T + + +E +S +I R L + +
Sbjct: 4 HLWGLLYLNLVTVLWGTTFVVVKGTVEVLSPSLIILGRFLVASLCFLPFTLTLRKE---- 59
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS-VFLGSVFLK 140
D L + L ++F + ++ + LG +
Sbjct: 60 -DEQSQRVLWLAAFELGFWLWAGYATQAVGLQYTSASRSAFITALNVILVPIILGLFGRR 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L A ++ + LL + ++ + +
Sbjct: 119 IGLAVWAAAALAVVGVGLLSYDGSPPNLGDLWTLGCAFTYAAYIIRLESYAKRLPALGLT 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V + + P + + + G R
Sbjct: 179 TVQVYGTALFALAWVLWEQPRVEWDRFPWFAIFYLGVFATALTTLLQTLGQGRVSAPEAA 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ P+ V + +L + + + +VV A ++ L S + +
Sbjct: 239 IIYVLEPVWASVFAFLLLGERLGAQGLVGAALVVSATLIDSLQYYWRSRTSARDR 293
>gi|266618956|ref|ZP_06111893.1| putative transporter [Clostridium botulinum Bf]
gi|263528964|gb|EEZ28428.1| putative transporter [Clostridium botulinum Bf]
Length = 324
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/304 (9%), Positives = 80/304 (26%), Gaps = 11/304 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + V A + WG + T+ L + S+P +F+ I F SL
Sbjct: 6 NDKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFRRDPSL 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV-FLGSVFL 139
K K + LL V+++ +
Sbjct: 66 FKVDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEK 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR----------KTIP 189
+ ++ L+ + M L + I + +
Sbjct: 126 FTTQKAISMLLILIGCFMMCEMHKLGSFNLSTKGIFWGLISGFTFALQILLAKVSNEKYH 185
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ AI ++ + + +
Sbjct: 186 YNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFKSSNNLFFLFKNIFWSVVGTLIANTAYVK 245
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + S ++ ++ V + Q ++ V+ + ++++++++ + +
Sbjct: 246 SVQYIEASIASMVSSLELVIASVLGFIVFNQALNLVQILGMALILVSIILLEMKKSVLLK 305
Query: 310 KNKT 313
K
Sbjct: 306 LFKR 309
>gi|167033235|ref|YP_001668466.1| hypothetical protein PputGB1_2229 [Pseudomonas putida GB-1]
gi|166859723|gb|ABY98130.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
GB-1]
Length = 292
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 82/282 (29%), Gaps = 5/282 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V A L+ ++FL + + ++ V ++ L
Sbjct: 11 NQPLRGIALVVVATFLFASHDALSKFLGGLYPIVMVVW-----ARYVVHTLLMAGIFLPK 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + A L F L + F+ PV+ L + LK
Sbjct: 66 SGLNVLRTRRPLLQTLRALSLLSTSLLFTTGLQYLPLAEATAVNFLAPVLVTALSAPLLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A +L + +L++ G + SA F +
Sbjct: 126 ERVTVGQWVAVVLGFIGVLVVVHPGGAMFTPAILYPFGSALGFCFYQLLTRILAAHDSPT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + L ++ G + + + A + +
Sbjct: 186 TSNFYAGLCNTLAMSALVPFFWEVPRWDHALLMLALGGFGMTAHLLLTQAFRHAAPALLA 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + + + Q DT+ + ++ ++ +
Sbjct: 246 PFSYCQIVFAGLLGFVVYSQVPDTLSLVGISVICLSGLGAAW 287
>gi|52842122|ref|YP_095921.1| integral membrane protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629233|gb|AAU27974.1| integral membrane protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 300
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 84/297 (28%), Gaps = 10/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G+ + + L+G + +S ++ R L S + ++
Sbjct: 1 MNSQEQRGSFYAILSGFLYGFIGYFGISAIHGDLSASNMLFWRFLISSIFILIVLI---- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + YA L L+ +F PVI +
Sbjct: 57 -PQLKNINDTYKSMFTAFLSGVLYYGLSTLLYFYASLYIGSGLSMVIFFTYPVIIMVFNY 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSS 193
F + + + +A +I++ + ++ + I I + Y +
Sbjct: 116 FFYSQTIPKIYYLAISVILIGMALLIDVNEIAFDLWGIFLGLASAFFYACYIVSSKNNEI 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V ++ + + + +K
Sbjct: 176 SPNVSTLMVCLGCMTTSLIVACLDHTFKVPTSFPVWLNLFGIGLVATVIPILLMLHSLKY 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ P+ +++ V +L + + + +V+ ++ L IN +
Sbjct: 236 ISSEKASILSVLEPVFVVIFGVVLLGEELKPWHALGIVLVLAGALITLFSHRINLNQ 292
>gi|330468986|ref|YP_004406729.1| hypothetical protein VAB18032_25155 [Verrucosispora maris
AB-18-032]
gi|328811957|gb|AEB46129.1| hypothetical protein VAB18032_25155 [Verrucosispora maris
AB-18-032]
Length = 327
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/301 (11%), Positives = 78/301 (25%), Gaps = 21/301 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L++ A I WG L + + V R + + + G
Sbjct: 10 RGILYICVAAIAWGTGGAVAAILYATSGLGPIAVSFWRFAGGVLLLLTVHLLVRG----- 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI-SVFLGSVFLK 140
+ +V + LAV+ + A+ + + I + +
Sbjct: 65 RTPASGEVNWRQVVVTGVGLAVYQTAYFAAVGYAGLAIATVVTLGAGPILIATGSHLLVG 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY------------CFARKTI 188
ERL + + + L+++ S + A
Sbjct: 125 ERLGRSGTVLVAMALAGLVLLVGGGTDGAGSAPMPGLLCALLSAAGYAGVTLLGRKVGRD 184
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S + + L + + + +F
Sbjct: 185 GTSGSPQITTLGGFAVGMVCLFPLALVEGLLPTSGETGQVLGLLAYLGLVPTALAYRLFF 244
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + +T ++ P+ V +V +L + + I++ A+V +
Sbjct: 245 AGLATVRATTTSVVALVEPVTAAVIAVLLLHERLTVPAVAGSAILLGAVVALTIGERRAV 304
Query: 309 G 309
Sbjct: 305 R 305
>gi|260913384|ref|ZP_05919865.1| DMT superfamily drug/metabolite transporter RarD [Pasteurella
dagmatis ATCC 43325]
gi|260632615|gb|EEX50785.1| DMT superfamily drug/metabolite transporter RarD [Pasteurella
dagmatis ATCC 43325]
Length = 291
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 128/292 (43%), Gaps = 8/292 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L A +L+G ++ L+ + ++ R++++LP V A+ F +LL
Sbjct: 2 VKGILLSLSASVLFGYLYYFSTLLQPLGGEDIFGFRIIFTLPFVIAAVFLFKQKQALLHY 61
Query: 84 TLKNPKAVGMLVFSAT---ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +++ ++ + F++A SF Y + P++ V G + K
Sbjct: 62 FERIKPQPLLILGFLFNSAMMGIQIWLFLWAPNNGSALSVSFGYLLLPLVMVLTGRIIFK 121
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E ++ ++ A ++ + + + L G+ +L ++ +S Y RK + + GF IE
Sbjct: 122 EHISRIKFFAVVIAAIGVFSNIILKGGLSWEALLVSFGYSTYFATRKILKINDLAGFCIE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M +L +++ + + + L+ GL++ + ++ +
Sbjct: 182 MSLLLPVCIYFALQVDLNAVQQVNPN---ILWLLVLLGLISGVALNTYIVASSLLPINVL 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G++ Y P++M+ S I + +D+ +F ++I+M++++ +I +
Sbjct: 239 GLLGYAEPIMMLFVSFLI-GEQLDSETIPLFICLMISMLLFMSEGLIRLKRR 289
>gi|254477448|ref|ZP_05090834.1| integral membrane protein [Ruegeria sp. R11]
gi|214031691|gb|EEB72526.1| integral membrane protein [Ruegeria sp. R11]
Length = 320
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 99/302 (32%), Gaps = 25/302 (8%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ G A + + + + +FL + +V+ R + ++ + I+ GG +L
Sbjct: 8 SLFGIFAAIGAAVAFSVIDVIFKFLSGDYPLYQVVMLRSIVAMIVLMAVIIPLEGGFGIL 67
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + + F L F TP++ L +FLKE
Sbjct: 68 RTRQPR-----LHLLRSLAVLFANLCFFTGLAIMPIAEAVAIAFATPLVVTTLSVIFLKE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R+ + +A + L +LI+ + A A +A + + G
Sbjct: 123 RVGPWRWLAVAVGFLGILIIMRPGPGTFQAAAFLPFLGACGYATLHVLTRRAGGSDKAAT 182
Query: 202 VLAIPALFYVVWNGF-------------------SGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ P L ++V + + D L + GL S
Sbjct: 183 LSFYPTLGFLVVSALVGLATGDGRFATSDSAALQFVLRAWVWPAPEDWLLFLTVGLAGSV 242
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ S + + V EY A + + V + + + I +++ A +V +
Sbjct: 243 GGYLVSQAYRLCEAGLVAPFEYIAMPMAVFWGVLVFDEWPEPAVWIGSALIIGAGLVSVW 302
Query: 303 PT 304
Sbjct: 303 RE 304
>gi|149187491|ref|ZP_01865789.1| hypothetical protein VSAK1_18247 [Vibrio shilonii AK1]
gi|148839027|gb|EDL55966.1| hypothetical protein VSAK1_18247 [Vibrio shilonii AK1]
Length = 294
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 82/283 (28%), Gaps = 2/283 (0%)
Query: 29 FVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
V A +WG + L+ + V +I RV ++ + VY L K T
Sbjct: 9 LVLLAS-IWGGSFLFMRIAANVMGPAVLIEARVFFAALALLIISVYLKKKLEFTKHTKHF 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L + + A T+ + + + + L L
Sbjct: 68 FIIGLFNTALPFLLFAYAAQTLNASTLSILNSTAAIWGAVIGVFWTKTPLTKRGALGLLV 127
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
I + +++ + + L +A + Y A S F A
Sbjct: 128 GIVGVAVLVGWDAVRIGEQATLPIIAGVMAACCYGIATNYAKNAPSVPAFNNAHGSMWAA 187
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
V+ ++ + + ++ + S+ + + P
Sbjct: 188 CLIVLPLIPFVPMRETPTQEVWISVVLLGVVCTGAAYLLYFRLVNDIGPSSALSVTFLIP 247
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ L +PI + +V+ ++ ++ + +
Sbjct: 248 MFGILWGNLFLGEPIGVNTIVGTVLVISGTMLVTGFSLSSLRR 290
>gi|119964347|ref|YP_946226.1| hypothetical protein AAur_0415 [Arthrobacter aurescens TC1]
gi|119951206|gb|ABM10117.1| putative Integral membrane protein DUF6 [Arthrobacter aurescens
TC1]
Length = 313
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 85/285 (29%), Gaps = 14/285 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ +G V +LW + + + S + R+ + + ++ L
Sbjct: 29 SKLGIAAVIITVVLWASAFVGIRAVGPSFSPGSLTLGRLAVAAVVLGIVVL------PTL 82
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + ++ + + A ++ V+P++ L VFLKE
Sbjct: 83 KVWPSGREWLPIVAYGVMWFGGYNVALNAAEHMLDAGTSAMLINVSPILIAILAGVFLKE 142
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF-------ARKTIPVGSSE 194
+I + + + ++ L SG + V + +
Sbjct: 143 GFPRWLLIGSGVAFCGVAMIALGSGQRSTADVAGVLLCLLAAVLASVSAILQKPVLRKFT 202
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + A+ + W G E + + F ++Y +
Sbjct: 203 AGQATWFGIMVGAICCLPWTGQLISEVQAAPLPATLGLVYLGIFPTAIAFTTWAYALSLI 262
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P I+ S +L++ I I ++ + +
Sbjct: 263 SAGKLAATTYLVPGTTILISWAVLQEVPTIWGLIGGVICLVGVGL 307
>gi|116251214|ref|YP_767052.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255862|emb|CAK06943.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 312
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/310 (15%), Positives = 100/310 (32%), Gaps = 15/310 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ M G + +++ + + + +V R ++L + + Y
Sbjct: 1 MHSVLRNPMRGIALKVSSVVVFLAMQTFIKLAGSDIPPGQVTFCRSFFALFPIMAYLAYN 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + TI + F Y LL + P+++V
Sbjct: 61 RQLRAAFYTA-----NPIGHLKRGTIGILSMAFGFYGLLHLPLPEAIALGYALPLVAVIF 115
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFAR 185
+VFL E + + A L+ I+ + I++ + V SA
Sbjct: 116 AAVFLGETVRIYRWSAVLVGIVGVAIVSWPKLTLFRDGGMEAEQAVGALCVLLSAVLGGV 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I V ++ ++ V++ S + + P L+LI G
Sbjct: 176 AMIQVRRLVEEEKTATIVLYFSITASVFSLASLPFGWLILAWPTALYLIAAGFCGGVAQI 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A +ST+ EYT+ LL + + F+ I IVV A + +
Sbjct: 236 LLTESYRHADVSTIAPFEYTSILLGGIVAYFVFGDVPSVTMLIGTVIVVAAGIFIIYREH 295
Query: 306 INSGKNKTKK 315
+ + +
Sbjct: 296 QLGIEQREAR 305
>gi|315612908|ref|ZP_07887819.1| membrane protein [Streptococcus sanguinis ATCC 49296]
gi|315315018|gb|EFU63059.1| membrane protein [Streptococcus sanguinis ATCC 49296]
Length = 301
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 104/301 (34%), Gaps = 10/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GTL+ A I WG++ Q+L +S L + + R++ + + S G
Sbjct: 2 SKTVKGTLYTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLIIAGLALVILSYATSQGK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 LLSFLKDR-KSLLSLLLFALFGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K +II+ L I ++ H L + + + I +
Sbjct: 121 DKVAPTLAEIISIGLAIGGTFLIATHGKVDQLSVTPLGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + + + F + F + F G
Sbjct: 181 KKWGSILVIGVGMVISGVVAIPFTGVLQASIPTSLDFLFAFAGIIIIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+K+ + + ++++A+++ L ++ K+
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMKEQFYAIDFVGMAMILLAVIIISLKDLLLEIKS 300
Query: 312 K 312
K
Sbjct: 301 K 301
>gi|195329842|ref|XP_002031619.1| GM23946 [Drosophila sechellia]
gi|194120562|gb|EDW42605.1| GM23946 [Drosophila sechellia]
Length = 347
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 88/292 (30%), Gaps = 13/292 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L + + + + + + L V+ +E+ S R + L ++Y + +
Sbjct: 38 LGILLATLSSLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQ--PVFPEG 95
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + ++ + F L + S FV FL +
Sbjct: 96 KRVILLLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCTLFNVL 155
Query: 145 HLQIIAALLIILSLLIMTLHSGIP-----------LLSLAIAVTWSAYCFARKTIPVGSS 193
+ + +++++ +A + + +
Sbjct: 156 TINMTLLGVVLITRPPFVFGDTTESEDVAGKTYDIWGPVAAISSTLFGANVYILLRALKN 215
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F + M AL Y + S G + D ++ G+ + + + ++
Sbjct: 216 LHFSVIMTNFGTIALVYTLIVCASIGAVCWPSCGRDRWLVVVLGVFSFLGQILLTLSLQI 275
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ V I + V + + + +V+ ++V+ L
Sbjct: 276 EQAGPVAIARCADIVFAFVWQMLFFGETPTAYSLVGAVMVMGSVVLTALKKW 327
>gi|260556600|ref|ZP_05828818.1| chloramphenicol-sensitive protein [Acinetobacter baumannii ATCC
19606]
gi|193078000|gb|ABO12920.2| chloramphenicol-sensitive protein [Acinetobacter baumannii ATCC
17978]
gi|260409859|gb|EEX03159.1| chloramphenicol-sensitive protein [Acinetobacter baumannii ATCC
19606]
Length = 314
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 57/294 (19%), Positives = 122/294 (41%), Gaps = 5/294 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSL 80
+ G + A + +G+ YTQ L Q+ + R++ +LP + + + S ++
Sbjct: 2 LKGVILSVMASLTFGVLYFYTQLLGQLDSEQTFGWRIIATLPFLTLFMWWSGDLSHIKNI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV
Sbjct: 62 YQRILAKPSLLLLLITTSVLTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q IA +L I+ + G A+ + F + + G F
Sbjct: 122 EKISKFQWIAIVLAIIGVGHEIFRLGSIAWETALVAIGYSAYFLLRKKIKTDNLGGFWWD 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +P Y+ G FL L + G G+L++ + + L G
Sbjct: 182 LLIIMPVAIYLTHTGLL-PYSKFLDQPTLGLVIAGLGVLSAIGLGCYILASRYLPLVVFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P+L+ ++ +L + I + + A+ V +L + + + K
Sbjct: 241 LLGYLEPVLLALA-SLVLGESIGKEEWFTYLPIWCAVFVLVLEGAFHLYQQQQK 293
>gi|319653601|ref|ZP_08007700.1| hypothetical protein HMPREF1013_04317 [Bacillus sp. 2_A_57_CT2]
gi|317394800|gb|EFV75539.1| hypothetical protein HMPREF1013_04317 [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 2/290 (0%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
F+ A +LWG T F E + + + R+ + + L L +K
Sbjct: 8 FFILLAGVLWGTTGTTQAFAPESAHPIAIGAARLAAGGLFLLCMVFLAGK-LDLKNWPIK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + L + + S + ++L
Sbjct: 67 NTLMASLCMALYQPLFFSAVTLTGVAIGTVTAIGSAPVLSGLLEWLYLKKRPSAIWWCST 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ ++L + ++H L LA+ + + + + + + V+
Sbjct: 127 FLSILGCVLLFMNKNSVHMDPAGLLLALGAGLTFAGYTLVSRDLVENYSSLSVVAVVFTL 186
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ F + T+ L L + +FS G+ ST +
Sbjct: 187 SAIFLSPFLFIFDMSWLGSVRGLTVSLHLGILATGIAYFLFSKGLVHVSSSTAVTLALAE 246
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
PL + VF+L + + V + ++++ + V + + + K + +S
Sbjct: 247 PLTAALLGVFLLGESLTAVSWLGIFLIMMGIGVLIGSSQNSGRKIRAAES 296
>gi|228995913|ref|ZP_04155571.1| Transporter, drug/metabolite exporter [Bacillus mycoides Rock3-17]
gi|229003530|ref|ZP_04161348.1| Transporter, drug/metabolite exporter [Bacillus mycoides Rock1-4]
gi|228757768|gb|EEM06995.1| Transporter, drug/metabolite exporter [Bacillus mycoides Rock1-4]
gi|228763885|gb|EEM12774.1| Transporter, drug/metabolite exporter [Bacillus mycoides Rock3-17]
Length = 310
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 106/298 (35%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L Q VS ++ + R+L + + ++
Sbjct: 3 MNNNRRLGLIMIITGATLWGVSGPMIQWLFQHTKVSSIDFLVIRLLLAGVFILCFLLTKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + +++FS + FI + + F+ PV+
Sbjct: 63 QN--IFRIWQHPRHLLQLIIFSILGMLGAQYAFIKTVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+V K+ + +Q++A + + + + L L A+ ++ Y
Sbjct: 121 AVQHKKLPSIMQVLAIVSALTGTYFIITNGSAQNIVLSKEAILFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L ++ F + + LI + + F +
Sbjct: 181 SLIKQWGTTLIIGWGMLIGGLALFICNLSFEWKQLSQTFTLQTFSMLILIIVSGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ LK+ + + +VIA++ +P
Sbjct: 241 YIGSLKYLSATETSILSSIEPLVAAIVSITWLKESFGAYQLLGGVCIVIAVIFLTMPE 298
>gi|207342108|gb|EDZ69972.1| YMR253Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 414
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 37/312 (11%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS----------VLEVISHRVLWSLPGVFFAIVYF 74
+G + + +Y + T+ LE L+++ R++ + G +
Sbjct: 69 IGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYIN 128
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+S + P+ LV Y+L+ F+ P +++FL
Sbjct: 129 KSTISDVP--FGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFL 186
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------------------- 172
V L+ER ++ + +L+ +L ++++ S +
Sbjct: 187 SWVILRERFTKVEALGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRLIATL 246
Query: 173 ---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ S + I + + L + ++ N + +
Sbjct: 247 VGLWGVLGMSCVYIIIRYIGKRAHAIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQ 306
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + + GI+R + +M YT L + V + K + I
Sbjct: 307 WVLFGNLGVSGFIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIG 366
Query: 290 FGIVVIAMVVYL 301
I++ A + +
Sbjct: 367 MIIIISATLWVI 378
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 48/152 (31%)
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ L+++T+ + + V+ ++
Sbjct: 68 NIGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYI 127
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S G +L+ G F Y + +S ++ + AP L I S
Sbjct: 128 NKSTISDVPFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLS 187
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
IL++ V + I ++ +V+ + P+ +
Sbjct: 188 WVILRERFTKVEALGSLISLLGVVLIVRPSFL 219
>gi|163744897|ref|ZP_02152257.1| hypothetical protein OIHEL45_04900 [Oceanibulbus indolifex HEL-45]
gi|161381715|gb|EDQ06124.1| hypothetical protein OIHEL45_04900 [Oceanibulbus indolifex HEL-45]
Length = 292
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 89/293 (30%), Gaps = 5/293 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S +G + + +++ + ++ L + +VL V+ R + V + +G
Sbjct: 2 SQSNNIPLGIMLMVATTMVFAVQDGLSRHLAENYNVLMVVMIRYWFFAAFVIALALRKAG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G+ T + + +L+ + + + P++ L
Sbjct: 62 GIRKAAATT----QPAVQILRGVLLSAQICTMVLGFTILGLVESHAVFTCYPLLVAALSG 117
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L E++ + A + + +L++ + A A FA +
Sbjct: 118 PILGEKVGWRRWAAIGVGFIGVLVILQPGLRVVDPAAAIPLAGAGMFAVYGLLTRYVARR 177
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ V G + + L + + + + A+
Sbjct: 178 DNTATSFFWTGVTGAVVMTAVGVWFWEPMTPGNWLLMGTLCITGVTGHWLLIRCYEVAEA 237
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S V YT + ++ + + + + G++V A + L +
Sbjct: 238 SAVQPFAYTQLIFTVIIGLSAFNEVLRPSVVLGAGMIVAAGLFTLWRERLQRR 290
>gi|302388843|ref|YP_003824664.1| protein of unknown function DUF6 transmembrane
[Thermosediminibacter oceani DSM 16646]
gi|302199471|gb|ADL07041.1| protein of unknown function DUF6 transmembrane
[Thermosediminibacter oceani DSM 16646]
Length = 293
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 82/294 (27%), Gaps = 13/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+++ + + WG+ + + L++++ ++ R L + +
Sbjct: 4 KKSLLADGALLLVTMAWGLNFVVMKNALQRITPFMYLAVRFLLAFLVLAAVF-------- 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L + + L+ + F V+ FL
Sbjct: 56 NENIKKVDKRDIIGGSIIGLFLFLGFATQTVGLIYTTPAKSGFITGSNVVMVPFLAYFVN 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG----IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
K+ Q++ A + L +++L G + + + A
Sbjct: 116 KKFPGWYQVLGAAVTFAGLGVISLEGGLRVNVGDFLTLLCAVFFAMQIVSTEYYARRGNP 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + I + + + L L + F + + K
Sbjct: 176 INLAILETGITGMLSLFVGALTEPMPVTLDLSMWIAILYAVICCTAGAFLVQNVAQKYTT 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + V S +P+ F +++ +++ L
Sbjct: 236 STHAAVIMCQEAVFAGVFSFLFWGEPVTFKALAGFALILAGVLITELSPAYGLK 289
>gi|284047439|ref|YP_003397778.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
gi|283951660|gb|ADB46463.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
Length = 288
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 94/277 (33%), Gaps = 13/277 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + ++G L +F+ + + + R + + K + PK
Sbjct: 12 MLLSLAIFGTIGLVRRFI-PLGSVPLAFLRAALGCLTLLVLMQAGHMPFHWDKLKERAPK 70
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ + A + + Y++ PV + + E + +++
Sbjct: 71 LLFSGLLLGLDWVFF----FEAFNHTTVAIATLCYYMAPVFMLAAAPLVFHETIRRRKLV 126
Query: 150 AALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A + I +L+++ G A+A + + + + +
Sbjct: 127 CAAITIGGMLLVSGVLGSDGNIGDITGVLCALAGAFFYAAIIVLSKTIQGLDPYEQTAVQ 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKLSTVGI 261
L A F +V+ F+G F + + + I+ + + T I
Sbjct: 187 LGTAAFFLLVYCLFTGQMDFQAMTGTGWGLTLLLGVVHTGLAYGIYFGSLTQVPAQTTAI 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ Y P++ + SVF+L++PI ++ +V+ M+
Sbjct: 247 LSYVDPVVAVCISVFVLQEPITELQLAGICLVLGGMI 283
Score = 36.0 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 35/110 (31%)
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ A+ L +V + L+ GLL + F
Sbjct: 30 PLGSVPLAFLRAALGCLTLLVLMQAGHMPFHWDKLKERAPKLLFSGLLLGLDWVFFFEAF 89
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ + Y AP+ M+ ++ + + I + + I + M++
Sbjct: 90 NHTTVAIATLCYYMAPVFMLAAAPLVFHETIRRRKLVCAAITIGGMLLVS 139
>gi|218511491|gb|ACK77752.1| putative drug/metabolite transporter [Streptomyces aureofaciens]
Length = 305
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 97/305 (31%), Gaps = 18/305 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S T+ + A +WG T L T L + L R L + +
Sbjct: 2 KSSRTLADSALTALAPAIWGSTYLVTTELLPEGRPLLAAVLRALPAGLILVLF------- 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K LV + + A G + + + P+I + LG+V
Sbjct: 55 ---GRTLPKGIWWWRALVLGVLNIGAFFYLLFMAAYHLPGGVAALVMSIQPMIVLLLGAV 111
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
LKE++ + + A L + ++ L L + + I + G
Sbjct: 112 LLKEKIRRIHLGACALGAAGVALLVLQPNAGLNATGVIAGLLGALSMASGIVLTKRWGRP 171
Query: 196 -----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
L + L + G + FL + F + I+ G
Sbjct: 172 EGVGLLPFTGWQLTVGGLVLLPIALIGEGLPDEITGKNVWGFLYLGLIGALFAYAIWFRG 231
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++R V + + +PL + F+L Q + ++ + IVV A+ + +
Sbjct: 232 VQRLPALAVSFLSFASPLAATLLGYFVLDQSLSPLQIVGALIVVGAVFLAQPRPGRKQPR 291
Query: 311 NKTKK 315
+ +
Sbjct: 292 PEPAR 296
>gi|307321548|ref|ZP_07600942.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|306892784|gb|EFN23576.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
Length = 314
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 82/294 (27%), Gaps = 1/294 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + + M L + I W + + L +V L + + R + I +
Sbjct: 21 NAADIPMTPFMPALAIAGTVITWSFSFAAIGYALREVEPLPLAAIRFALAAVFAIAWIAW 80
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L +D + + + + + +L + A T + V +
Sbjct: 81 RRPRCFLPRDFVVLAISGLLGIAAYNVLLNLGQAAVSAGAAGFIVNTQPLFMVLLAVLFL 140
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + + + +I S L G + +A + + +
Sbjct: 141 KERFGRWNWVGTIVGFSGVALIASGQPGGLSFGTGSTLIVLAAACAGAYSILQRPLFARA 200
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
E + V+ AL W + + + ++Y +K
Sbjct: 201 EPLDVTALVIVAGALALTPWLPAGVSQLMRARPDTWLMIMFLAVGPGIIGQSCWTYALKS 260
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ G Y P + + +L + + + + +++ +
Sbjct: 261 FGAARAGQFLYLVPPSSVGLAWLLLGEIPQANTILGGALALAGVIIVNRWGRRS 314
>gi|229115248|ref|ZP_04244658.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock1-3]
gi|228668388|gb|EEL23820.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock1-3]
Length = 321
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 96/297 (32%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 4 NRLKGIIMVIIGACLWGLSGTAAQQLFQYENVSTEWLVTIRLLISGVILLIISSFGTRKK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 64 EIFAIWKQKSDASKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 124 WNVRPSKIDYISITLSLVGTFLLLTNGSMYNLAVSTPAIIWGILSGLSLAFYSLYSKKLL 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + S E L I + +F
Sbjct: 184 EKWSSSVIVGWGMIIGGIGVTILHFVSTNEFILLSTIKYVKLSTLPLITFVVIFGTLIAF 243
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 244 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILS 300
>gi|190150370|ref|YP_001968895.1| hypothetical protein APP7_1101 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|189915501|gb|ACE61753.1| hypothetical protein APP7_1101 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
Length = 288
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 110/290 (37%), Gaps = 6/290 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L A L+G+ + L ++ + +R++ P + AI+ F +
Sbjct: 2 LKGILCCMSANFLFGLGYYFAILLRPLNGESMFGYRIVVLAPFILLAILLFKQTNKFQQL 61
Query: 84 TLK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K NP V +L+ A + F++A Q S Y + P+++V LG + K
Sbjct: 62 WQKIKQNPPLVLVLLLLALNTGIQLWLFLWAPNNGQAIEVSIGYLLLPIVAVALGKIVFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ ++ ++ + +G + +A +
Sbjct: 122 EHFTLLKWLSLCCAVIGVASNIWLTGSFSWATIVAGVGYPLYITLRRYFE--INTLATFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + F + + + N FL +GL+N F ++ ++ +G
Sbjct: 180 VELLLVMPFAGYFIAQTDMQPILADNQYIYYFLTLFGLVNGAAFILYIASSNLLPVNVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ Y PL+M+ S I + +D+ ++ + +A+++ + + +
Sbjct: 240 LLGYVEPLVMLCVSFMI-GEVLDSKSYLLMICLALAIILLTVDNFRLTRR 288
>gi|188587325|ref|YP_001918870.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179352012|gb|ACB86282.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 310
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 97/287 (33%), Gaps = 10/287 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + I +G + Q + + +++++ R + +F I+ +
Sbjct: 4 KKAGIFITAVSAIGFGSMTVLAQLAYASGANTMDLLTIRFTVAAL-IFGIIIGCMALTNH 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK L + + ++ A+ + + + + L F F PV+ L +
Sbjct: 63 LKWQLSWKQVLTLIALGASGYGIFSSMYFHGVSLIPASLAGFLLFTYPVMVCILAYFLGE 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
E ++ +I+A + + + + ++ + + + + + +
Sbjct: 123 EPVDSQKILALAVSLCGSIFVLGPVVEDVNWEGVTFVMLAAFLYSLYVVGSSRILKDVHW 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC---IFSYGIKR 253
F +L I + + + L NI D + G L F G+
Sbjct: 183 FPASAILTISCAGFFLGRELIFNNGYNLANINDEIMFYGVILGVFSTLIAIACFYLGLSL 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S I+ P+ + I + + ++ I +++++++
Sbjct: 243 IGPSRASIISTLEPVSSACLAALIFNEQLSILQLIGASCILLSILII 289
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 41/111 (36%)
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I V A+ + + + L + ++ +G+
Sbjct: 36 MDLLTIRFTVAALIFGIIIGCMALTNHLKWQLSWKQVLTLIALGASGYGIFSSMYFHGVS 95
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S G + +T P+++ + + F+ ++P+D+ + + + + + L P
Sbjct: 96 LIPASLAGFLLFTYPVMVCILAYFLGEEPVDSQKILALAVSLCGSIFVLGP 146
>gi|167770881|ref|ZP_02442934.1| hypothetical protein ANACOL_02234 [Anaerotruncus colihominis DSM
17241]
gi|167666921|gb|EDS11051.1| hypothetical protein ANACOL_02234 [Anaerotruncus colihominis DSM
17241]
Length = 300
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/284 (9%), Positives = 81/284 (28%), Gaps = 17/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ WG T + T+ L V S + ++ R + + + + +
Sbjct: 8 IILALVTICFWGTTFVSTKILLGVLSPIHIMLLRYVIAYVSLLAI------HPKIHRPES 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + T+ ++ + SV E L
Sbjct: 62 LSLEFRYVAAALFGSTLYFLAENFALSFTQAANVSLLISAAPILTSVVAHLTTRDEHLTR 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
+ + + + ++ + L ++ + +
Sbjct: 122 NAVGGFFVAMTGIALVVFNGSFVLKLSPKGDLLAVAAALSWAFYSVILRGIRSSYPPVYV 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++++ + L + +S + +++Y +
Sbjct: 182 TRRIFFYSILTMLPCLLFDAAPFDMAVLKEPLILGNLLFLGLIASSLCYVLWNYVVAGLG 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++SV +L + I + ++++ ++V
Sbjct: 242 AVRSNNFVYLNPLITMIASVIVLHERITPLMIAGAILILLGVIV 285
>gi|302392526|ref|YP_003828346.1| hypothetical protein Acear_1776 [Acetohalobium arabaticum DSM 5501]
gi|302204603|gb|ADL13281.1| protein of unknown function DUF6 transmembrane [Acetohalobium
arabaticum DSM 5501]
Length = 298
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 86/284 (30%), Gaps = 13/284 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + + + + ++ R ++ + L
Sbjct: 10 KKRIKADLALLFVVFVWGTTFAIMKGVFDIVTPFYFLTLRFWTAVIVLVLIFHRRLKKL- 68
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + F L + F + L F ++ VI L ++ L
Sbjct: 69 -------DWETIKLGSFVGIFLFGGFAFQVVGLNYTTASKAGFLTGLSVVIVPILSAIIL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEG 195
K+ + L +I L + L +++ + + + A V +
Sbjct: 122 KKIPSMLTVIGVTLATIGLGLLSFNGEFIFNFGDFLVFLCAVSLAVYILLVGKYVQQKDS 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + AL + G L + + + + +
Sbjct: 182 ILLTIVQITTVALLSGFSSLVEGSFEVVLQPELWGAVVYMAFFATTLALVVQNKAQEFTT 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I+ P+ V + F L + I ++V+ M++
Sbjct: 242 PTRTAIIFSMEPVFAAVFAYFYLGEVISVNSYWGGLLIVVGMII 285
Score = 36.4 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 36/131 (27%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+A+ + + + + L + V+ +
Sbjct: 17 LALLFVVFVWGTTFAIMKGVFDIVTPFYFLTLRFWTAVIVLVLIFHRRLKKLDWETIKLG 76
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
G+ F G+ S G + + +++ + S ILK+ + I +
Sbjct: 77 SFVGIFLFGGFAFQVVGLNYTTASKAGFLTGLSVVIVPILSAIILKKIPSMLTVIGVTLA 136
Query: 294 VIAMVVYLLPT 304
I + +
Sbjct: 137 TIGLGLLSFNG 147
>gi|225618953|ref|YP_002720179.1| permease [Brachyspira hyodysenteriae WA1]
gi|225213772|gb|ACN82506.1| permease [Brachyspira hyodysenteriae WA1]
Length = 289
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 52/282 (18%), Positives = 120/282 (42%), Gaps = 10/282 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L AYI+WG+ PLY + ++ V+ RV+ + I+Y L +
Sbjct: 13 ILLASAAYIIWGLLPLYWKSVQNFDSAFVLGLRVITTFIFTLIIIIYKKSNL------YR 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K + ++ + L ++W +IY + + +Y++ P++S+ +G + +E+ L
Sbjct: 67 GIKPLISIIIAGIFLGLNWYLYIYTVNSGHVLEAGLAYYIAPILSILVGIIVFREKKTPL 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ A +L+ + ++ T+ G P I + F+ + + E L
Sbjct: 127 EYAAIILMFIGMIYQTITLGKP----PIMAFFIGLTFSIYGLFKKLTIYSSWESLFLETT 182
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
A+ + I + L+ G+ +++ K ++ST+G +++
Sbjct: 183 AILIPSIILSTIYFPKTPQPIHTWVSLMFAGVATGIPLYLYAKAAKGLQVSTLGFLQFLL 242
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P + ++F+ K+ ++ R I I++++ ++Y + NS
Sbjct: 243 PFFATLLAIFVYKEEVNLNRAITLAIIILSAILYAISIFKNS 284
>gi|224371171|ref|YP_002605335.1| permease of the drug/metabolite transporter (DMT) superfamily
[Desulfobacterium autotrophicum HRM2]
gi|223693888|gb|ACN17171.1| permease of the drug/metabolite transporter (DMT) superfamily
[Desulfobacterium autotrophicum HRM2]
Length = 312
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 92/301 (30%), Gaps = 14/301 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
S G L++ CA ILW ++ L V+ ++ R+ + F +
Sbjct: 15 TSSLKTDDSATQGYLYIACAAILWASGGAASKALFNAGVTPEHLVQMRLTLASAVFFVWM 74
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ +++ +A ++ A+ + P +
Sbjct: 75 KLVCPDRLKISP----GDLPSLILLGVFGIATVQYTYLVAISKINVASAILLQYQAPALM 130
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCF 183
V LKE++ L + A L L ++ + LLS+ ++ A+
Sbjct: 131 VVFSVFVLKEKIRLLTLGAILFSTLGCYLVVGAYDLSLLSMNRLGMVAGLVSACAFAFYT 190
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + I A+ + + G L +
Sbjct: 191 MYGEYWMQRYHAITVIFYSTLIAAMAWNLVQQPLGAFEPAYTFHQWLLIALIAIPGTVVA 250
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F ++ GI + + GI P+ + L + + ++ + IV+ ++V L
Sbjct: 251 FTLYFKGINIIRSARAGITATLEPIAAGAIAYLFLGEILAPLQMLGGLIVIGVVIVLQLD 310
Query: 304 T 304
Sbjct: 311 K 311
>gi|307945748|ref|ZP_07661084.1| integral membrane protein [Roseibium sp. TrichSKD4]
gi|307771621|gb|EFO30846.1| integral membrane protein [Roseibium sp. TrichSKD4]
Length = 322
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 89/290 (30%), Gaps = 9/290 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L++ A L+ I + E +SV +++ R + V I+
Sbjct: 27 SNTIGALWILLAAFLFTIMATLIKLAGEGLSVFQILVVRQAVMVAIVAPKIL-------P 79
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K G+ + AL+ + F +FL
Sbjct: 80 NLPGSLATKRPGLQAARIVFASTAMLCGFTALIELPLADATALNFSKTFFITIFAIIFLG 139
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI-PVGSSEGFFIE 199
E + + A ++ L +LIM G L+ A+ + A + +
Sbjct: 140 ETVGFHRWGATIVGFLGVLIMLRPEGDGLVDPYAALAIAGAACAGMVMVILRILTRTDPP 199
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ VL A+F + + ++ +I G+++ K + + +
Sbjct: 200 ITVLTYQAVFVGLLMAIPAYMTWQTPSMEQWAIMIVLGVVSWAAQMCNIKAFKAGEATAI 259
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++YT L V I I +++ A + + I
Sbjct: 260 ASLDYTRLLYATVFGAVIFGNWPSVETLIGAAVIIAASLYTVRREAIKGR 309
>gi|238751284|ref|ZP_04612778.1| hypothetical protein yrohd0001_24950 [Yersinia rohdei ATCC 43380]
gi|238710558|gb|EEQ02782.1| hypothetical protein yrohd0001_24950 [Yersinia rohdei ATCC 43380]
Length = 349
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 94/308 (30%), Gaps = 35/308 (11%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + +L G T + + L + + R + ++ +
Sbjct: 25 KRQGYLLAIISAMLLGFTGIIIRILTVHYHLPTSVLAFWRAALVAAVLLPILLVTKPQWA 84
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ +LAV G + ++ +++ + + +VFLG VF
Sbjct: 85 KLRRDQVKFYLAY-----GLLLAVFNGLWTESVALNGASISTILSYCSVGFTVFLGWVFY 139
Query: 140 KERLNHLQIIAALLIILSLLIMTLH------------------SGIPLLSLAIAVTWSAY 181
E + +++ ++ + +++ SG+ +A +
Sbjct: 140 NEYMGWRELLVIIISLFGCFLVSNGLNIAAADFNFIGLLIGLASGVGYSFYTLAGRLATD 199
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL---------GNIPDTLF 232
+ GF ++ + + G L
Sbjct: 200 RQYPVWNTILYVFGFSAVYQLIFNQLMLWFPVQGMQQMVGNLWFLSHGAEGIQWSGWWLL 259
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
LI F +F+ +K L+ ++ + V + F+L + + + + +
Sbjct: 260 LILAAGPTLLGFGLFNLSLKTLPLAVASLLLTLELVFTAVIAYFLLGETLSASQLLGSAL 319
Query: 293 VVIAMVVY 300
V++ +++
Sbjct: 320 VLLGVLML 327
>gi|311115133|ref|YP_003986354.1| DMT superfamily drug/metabolite transporter [Gardnerella vaginalis
ATCC 14019]
gi|310946627|gb|ADP39331.1| DMT superfamily drug/metabolite transporter [Gardnerella vaginalis
ATCC 14019]
Length = 294
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 101/298 (33%), Gaps = 13/298 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S+ + + + +WG + + L + +++++ R + +
Sbjct: 4 SMRRKLAIIGLTVVTAIWGGGFVASDIALGSFAPMQIMTIRFAIAALVMLVI-------- 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + T+ N K + V L + + L +F + VI FL
Sbjct: 56 SAKQFTVINYKEILAGVGMGVALFAGFSLQTFGLQYTTPSKNAFITSLNVVIVPFLSMFL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSE 194
K+R+ +I+ A+L +L + I++L + + + A I V
Sbjct: 116 FKKRVGLKEIVGAILSVLGVAILSLSNNFTISFGDLLTLLCALGFASQIVLTGIFVKVYR 175
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + L V F+G H+ + + + + + + K
Sbjct: 176 PNVLNCIQMCTAFLLSFVVMQFTGECHWIASPNGWISVIYLGFISTTVCYLLQTACQKYV 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ I+ + + S+ +L + + I I++ A+++ LP+ K
Sbjct: 236 NETQSAIVLSLEAVFGTLFSIILLNEIVTIRMIIGSAIILCAVLISSLPSSFIRRSTK 293
>gi|209550203|ref|YP_002282120.1| hypothetical protein Rleg2_2623 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535959|gb|ACI55894.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 318
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 99/303 (32%), Gaps = 16/303 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+++ G +F + + + ++ + + + EV + R + +++
Sbjct: 10 SSASEVTTGLALMFLSVMFSPLIDIFAKLAVVTIPSAEVTAGRFFVQALCMLPIVIWRRS 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + I+ V F+ L +FV P++ LG
Sbjct: 70 F------ADFSWRQSLFHAIRGLIITVSMISFVTTLKYMAVADAIAIFFVEPIMVTILGG 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+FLKE + + A + +++ S + +A+ SA C A +
Sbjct: 124 IFLKETIGWRRYTACGVGFFGAMLIIQPSFQEVGYIALLPVLSALCIAIFVLMTRVLSHR 183
Query: 197 FIEMCVLAIPALFYVVWNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ ++ +++ S + ++ G G + +
Sbjct: 184 EDPWAMQFQMGIWGLIFCAILLFIGDGSGSDLFDPVMPEGSAWFYVAGVGAMAAIAGIFG 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + A ST+ ++Y + + + + + V+ + I++ + + L
Sbjct: 244 VYAFRAAPASTLAPLQYFEIVSATIFAWLVFGDFPNAVKWLGIAIIMASGLYILWRERRF 303
Query: 308 SGK 310
+ K
Sbjct: 304 ASK 306
>gi|163745951|ref|ZP_02153310.1| hypothetical protein OIHEL45_10203 [Oceanibulbus indolifex HEL-45]
gi|161380696|gb|EDQ05106.1| hypothetical protein OIHEL45_10203 [Oceanibulbus indolifex HEL-45]
Length = 309
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 93/293 (31%), Gaps = 8/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++G ++ + +++ + E R L + +
Sbjct: 14 PANRPLVGVFWMLVTGACFIGVTALVKYMGPRLPSAEAAFLRYAMGLVFILPML------ 67
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L T + + G+ A + YA+ + ++ P+ ++
Sbjct: 68 -RSLLATPVSKRQWGLFGLRGFFHAGGVILWFYAMTRLPIAEVTAMNYLAPIYVTVGAAI 126
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E+L +I+A L + I+ + + +A+ +A FA +
Sbjct: 127 FLGEKLAARRIVAVCLGLAGAAIILRPGFREVSTGHLAMLLAAVVFAGSYLLAKVLADEA 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ + ++F + + + L L G + + A ++
Sbjct: 187 RPVMIVTMLSIFVTIGLAPFAFTVWITPTAQELLILAGVAFFATAGHFTMTLAFAAAPVT 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + + V + +P+D + +++ ++ + +
Sbjct: 247 VTQPVTFLQLVWATILGVVVFAEPVDIWVVLGGAVILGSVTFITWREAMLKRQ 299
>gi|259503711|ref|ZP_05746613.1| DMT superfamily drug/metabolite transporter [Lactobacillus antri
DSM 16041]
gi|259168343|gb|EEW52838.1| DMT superfamily drug/metabolite transporter [Lactobacillus antri
DSM 16041]
Length = 305
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 91/297 (30%), Gaps = 14/297 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ +G V A WGI+ L+ + L ++ L V R+ + G+ +
Sbjct: 1 MNNKKALGIAMVITACTFWGISGLFAKGLFNASSSITSLWVTQSRM--TAAGILLVLFSL 58
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G + + + L + + + + FV P +
Sbjct: 59 VKGDHPFRIFKSPHDTWVIFSYGIFGLVPVQFAYFMVVQYGNASIATILQFVGPFFIIAY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARK 186
+ F ++II A++ + + + H L+ I+ A
Sbjct: 119 QAAFRHIPPRRIEIICAIIAFIGVFTIATHGRFNKLAVTPAILIWGLISAIGVATNTLIP 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + V+ H + +L + F +
Sbjct: 179 QKMLREGRVPSLVITAWGLLFSGIVLLALHPAQPHVPNIPVVWFCWLGVLVIGTLIPFQL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +K +T +M+ PL + SV I + I +V++A++ +
Sbjct: 239 ANNALKYIDATTFSLMDAFEPLSATIGSVLIFHLNMTGADIIGSILVIVAVLALNIR 295
>gi|331007182|ref|ZP_08330395.1| Permease of the drug/metabolite transporter (DMT) superfamily
[gamma proteobacterium IMCC1989]
gi|330419014|gb|EGG93467.1| Permease of the drug/metabolite transporter (DMT) superfamily
[gamma proteobacterium IMCC1989]
Length = 277
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 93/282 (32%), Gaps = 17/282 (6%)
Query: 33 AYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ + + + ++ + + + VLE+++ R L S S K +
Sbjct: 2 SALGFSLMGVFVRIAYEQGIPVLEIVAARALVSAVI--------SYVDVKRKHISLWGQR 53
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+L+ A+ F AL + ++ P+ + L +FL+E L +I
Sbjct: 54 KDLLIARGAAGAIALIFVYTALTALPFAEATVLQYLHPMFTALLAIIFLREYLQKNTVIC 113
Query: 151 ALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+L ++ LLIM S G A A+ A + V ++
Sbjct: 114 IVLSVIGLLIMVRPSFIFEGLSGDYPAWAVAAAIAGAFGSAVAYVLVRKLNATEDSSVII 173
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + + G+ + L L+ G+ + +K A S
Sbjct: 174 FYFPIMALPLSLLMLGDEIVMPQGWAWLSLLLVGITTQVGQVGLTKAMKTASASKATSFS 233
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y + +V V + ++++ +V+ PT
Sbjct: 234 YLQIIFAMVFGVLFFDEIPTVWTITGAMLIMLGVVINAWPTR 275
>gi|294647221|ref|ZP_06724820.1| putative membrane protein [Bacteroides ovatus SD CC 2a]
gi|292637508|gb|EFF55927.1| putative membrane protein [Bacteroides ovatus SD CC 2a]
Length = 322
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 96/298 (32%), Gaps = 15/298 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A +G+ PL+ + +SV V+ +R ++ + +
Sbjct: 2 TNKTKGFIYGAIAAASYGMNPLFALPLYAAGMSVDTVLFYRYFFATIVLGILMKMQHQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K + + + + + + S FV PV+ + +F
Sbjct: 62 ALHKADVLPLVIM------GLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVAVIMGIF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
KE+++ + + + LL + + ++ G + L +++++ Y +
Sbjct: 116 FKEKISAITVFSILLALSGIALLYQGDGNKPLSTLGIIFVLLSSLSYAIYIVGVNRSTLK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y+V F L L + + I
Sbjct: 176 NLPTTKLTFYAILFGLSVYIVRLNFCTELQVIPSAWLWADVLSLAILPTAVSLVCTALAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ P+ + V + + + + +++ A+ + ++ +
Sbjct: 236 HYIGSTPTAILGALEPVTALFFGVLLFHEKLTPRLMMGILMIITAVTLIIIGKSLIKK 293
>gi|256544694|ref|ZP_05472066.1| membrane protein [Anaerococcus vaginalis ATCC 51170]
gi|256399583|gb|EEU13188.1| membrane protein [Anaerococcus vaginalis ATCC 51170]
Length = 300
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 86/300 (28%), Gaps = 8/300 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + +WG + + + R L + + +
Sbjct: 2 KNKHRGELLLLLTSFIWGFAFIAQKLGSDYIEPFTFNFFRNLTAGIFLLAYSFFKKNKPR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
D++ + + + ++AV F + F + VI +
Sbjct: 62 KKVDSITKTATIRGGIATGLVMAVAVSFQQTGVYFTTSGKAGFITSLYVVIVPIFAIF-M 120
Query: 140 KERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++++ I+ +L ++ L ++T + + + + A+ +
Sbjct: 121 GKKVSKKTAISIILALVGLYLLTVRVDDGFSINKGDILIFVGSLFFAFHILFIDKFSIRA 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + M + +L ++ +F L L + + + K
Sbjct: 181 DSVKMSMIQFFVASLVSLLLMILFEKPNFDLLMKGMLAILYLGIFSSGLGYTLQIVAQKD 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ ++ + LK+ I I+ IA+++ +P K
Sbjct: 241 TDPTIASLILSLESVFAAFFGFLFLKERPVDREIIGGIIMFIAIILSQIPEQKIKKFLKK 300
>gi|253582674|ref|ZP_04859895.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251835544|gb|EES64084.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 295
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/288 (16%), Positives = 99/288 (34%), Gaps = 14/288 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+N + + A ++WG T + L V ++ R +S + +I+Y
Sbjct: 4 NKNEKIKIISSVTLAIVA-LVWGTTFAVIKDTLSIVQPFSLMMLRFGFSA--LLLSILYI 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+KN + + + + F I ++ SF +I FL
Sbjct: 61 GKIRKARIKDIKNGGII------GIFMFLAFYFMIISIKNTTASKVSFIIGAYVLIVPFL 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS- 193
V K++ + + A+L + L +T+ GI IA ++ FA I +
Sbjct: 115 AWVINKKKPDKYAVTGAVLATVGLGFLTIEKGIDFNVWDIAAVCCSFFFAAHMIAIEKYG 174
Query: 194 ---EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + A +V+ G G F + + F I +
Sbjct: 175 KDSDPILATVIQFIVTAGIFVLLTGCFEGYDFSILPRIKWTLGYLVVISTVIPFAIQTAV 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
K ++ ++ + V +V+ L + + I +V +A+V
Sbjct: 235 QKYISSTSTALILTLQSVFGAVFAVWYLDERMTFQMGIGCVLVFVAIV 282
>gi|168180001|ref|ZP_02614665.1| putative transporter [Clostridium botulinum NCTC 2916]
gi|182669042|gb|EDT81018.1| putative transporter [Clostridium botulinum NCTC 2916]
Length = 324
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/302 (10%), Positives = 80/302 (26%), Gaps = 11/302 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G + V A I WG + T+ L + S+P +F+ I F SL K
Sbjct: 8 KKLGLILVLLAAIFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFRRDPSLFK 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV-FLGSVFLKE 141
K + LL V+++ +
Sbjct: 68 VDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEKFT 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR----------KTIPVG 191
+ ++ L+ + M L S I + +
Sbjct: 128 TQKAISMLLILIGCFMMCEMHKLGSFNLSSKGIFWGLISGFTFALQILLAKVSNEKYHYN 187
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ AI ++ + + + +
Sbjct: 188 HNSLLTYSFLFAAIFLFPFMDMKNNIHIFQSSNNLFFLFKNIFWSVIGTLIANTAYVKSV 247
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + S ++ ++ V + Q ++ V+ + ++++++++ + +
Sbjct: 248 EYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKKSVLLKLF 307
Query: 312 KT 313
K
Sbjct: 308 KR 309
>gi|83589973|ref|YP_429982.1| hypothetical protein Moth_1125 [Moorella thermoacetica ATCC 39073]
gi|83572887|gb|ABC19439.1| Protein of unknown function DUF6, transmembrane [Moorella
thermoacetica ATCC 39073]
Length = 294
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 73/271 (26%), Gaps = 13/271 (4%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG T L + L + ++ R L + + L L
Sbjct: 15 TFIWGTTFLVVKRALGGIGPYYFVALRFLLAFIFLALMAWRQLPSLDRLTALHG------ 68
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ F L F ++ ++ L + F + ++ AL
Sbjct: 69 --GVVGLFLSAGCIFQTLGLQYTSAANAGFISGLSVILVPILEAFFARTLPGIFPLLGAL 126
Query: 153 LIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L ++TL + + A + L L
Sbjct: 127 SATTGLALLTLKGRLALNPGDFLVFLCALSFAGQIILVERYTSDHDSLLFTTVQLGTVTL 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ L FL+ S + I + + + I+ P+
Sbjct: 187 VSFLLAIPLETLPVTLTPAVWQAFLLTALPATSLAYLIQNKVQQFTTATHTAIIFTMEPV 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + F ++ + + I ++++ M +
Sbjct: 247 FAALVAYFWGQEALTWQQGIGCFLILVGMFL 277
>gi|259148840|emb|CAY82085.1| EC1118_1M3_4588p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/312 (13%), Positives = 99/312 (31%), Gaps = 37/312 (11%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS----------VLEVISHRVLWSLPGVFFAIVYF 74
+G + + +Y + T+ LE L+++ R++ + G +
Sbjct: 69 IGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYIN 128
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+S + P+ LV Y+L+ F+ P +++FL
Sbjct: 129 KSTISDVP--FGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFL 186
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------------------- 172
V LKER ++ + +L+ +L ++++ S +
Sbjct: 187 SWVILKERFTKVEALGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRLIATL 246
Query: 173 ---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ S + I + + L + ++ N + +
Sbjct: 247 VGLWGVLGMSCVYIIIRYIGKRAHAIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQ 306
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + + GI+R + +M YT L + V + K + I
Sbjct: 307 WILFGNLGVSGFIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIG 366
Query: 290 FGIVVIAMVVYL 301
I++ A + +
Sbjct: 367 MIIIISATLWVI 378
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 48/152 (31%)
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ L+++T+ + + V+ ++
Sbjct: 68 NIGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYI 127
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S G +L+ G F Y + +S ++ + AP L I S
Sbjct: 128 NKSTISDVPFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLS 187
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
ILK+ V + I ++ +V+ + P+ +
Sbjct: 188 WVILKERFTKVEALGSLISLLGVVLIVRPSFL 219
>gi|313125614|ref|YP_004035884.1| dmt(drug/metabolite transporter) superfamily permease
[Halogeometricum borinquense DSM 11551]
gi|312291979|gb|ADQ66439.1| DMT(drug/metabolite transporter) superfamily permease
[Halogeometricum borinquense DSM 11551]
Length = 331
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 89/297 (29%), Gaps = 14/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +F A +G T + + LE L +++R + ++Y
Sbjct: 1 MSRYRSLVFFLAASAFFGGTFVAAKAGLEFFPPLLFVAYRFDIGAALLLSVVLY--RFPR 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-SVF 138
G+L + ++S Y + P+++ L +
Sbjct: 59 ERWLPRTRADIAGILAAGVFAIGATNALIFVGQQYVTSGVSSIIYSLNPIMTPILAAFLL 118
Query: 139 LKERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
ERL+ LL ++ + ++ L + +L +A S +
Sbjct: 119 SDERLSRSGAGGMLLGLVGVALVVNLNPADLLGGAVVGKALVLAAAVSGALGSVLIRRAD 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEH---FFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S+ + A + F+ GE + F +
Sbjct: 179 STLDSTVRTAWALPVAAVLCHVSSFAAGEQASAVTWTPAALAALGYVGVFSGALAFIAYF 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ Y P++ + +L + I + + FG++ + V+ T+
Sbjct: 239 GLLDDVGAIRGNLVFYAVPIVATLGGWLLLGETISALTVVGFGVICLGFVLLGRETI 295
>gi|326336359|ref|ZP_08202530.1| integral membrane protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691533|gb|EGD33501.1| integral membrane protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 289
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 105/284 (36%), Gaps = 14/284 (4%)
Query: 24 MMGTLFVFCAYILWGITPLY---TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L F + +G+ PL+ + E SV + +R L + + + Y L +
Sbjct: 5 VKGYLCAFISAFTYGLIPLFMIPIKKAETFSVDATLFYRFLIASGSILIFLFYQKERLRI 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +G++ A+ F A + S +F P+I + +F K
Sbjct: 65 ------SFREMGIMTLLGLFYALSAEFLFLAYDYLSPGIASTIFFSYPIIVALILVLFYK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----WSAYCFARKTIPVGSSEG 195
E++ +++ LL++ + ++++ G + +A++ A + G
Sbjct: 119 EKITLPTVLSLLLVVAGVGMLSIKKGAAFNYVGLAISLLGALVYALYILIINKVRIEASG 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + +++++V + + S Y ++
Sbjct: 179 VKVSFYSMFFSSIYFLVKAIIFRENITISSLSLVGNLTLFALITTSLSLVALVYAVRYIG 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ IM P++ ++ SV + + + + I +++ +++
Sbjct: 239 STPTAIMGAFEPIVAVLISVGLFGEALTSSLIIGGMVIIAGVLI 282
>gi|304409622|ref|ZP_07391242.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS183]
gi|307303980|ref|ZP_07583733.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
BA175]
gi|304352140|gb|EFM16538.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS183]
gi|306912878|gb|EFN43301.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
BA175]
Length = 292
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 89/293 (30%), Gaps = 12/293 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ + +F A IL G + +F + + +R+L + ++ G +
Sbjct: 3 SSALAIIFALLAAILMGTIGVLARFAA-LPAEHITFYRLLLGALFLLAYMLLTGKGHQIR 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K +LA F+I A+ Q ++ PV+S F E
Sbjct: 62 HRLSKRNLVN------GAMLAGFMAFYIEAIQYTQMANVIMIIYLAPVVSAIFAHYFFAE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAYCFARKTIPVGSSEGF 196
+L L + + ++ ++ ++M + + + +
Sbjct: 116 KLTRLSMASVVVALMGFMLMIPTGPQQASNHTELLGYFYALLALLTYCGFMLINRKPSLS 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L ++ + + + +++
Sbjct: 176 SPYQSTLVQLSVGALCLLPLVINAPLTPSLPQIAWLIAIGFFPGFLAILLAVKALRQLPA 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T G + Y P++++ + +I + + ++ G++++A + +
Sbjct: 236 VTFGTLAYVEPVIVVTLAWWIFGETLSPMQLSGVGLIILAGISQGFISQRKVR 288
>gi|294794766|ref|ZP_06759901.1| membrane protein [Veillonella sp. 3_1_44]
gi|294454128|gb|EFG22502.1| membrane protein [Veillonella sp. 3_1_44]
Length = 308
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/309 (10%), Positives = 99/309 (32%), Gaps = 12/309 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
++G + +LWG++ QFL +++ +++ R L + + +F
Sbjct: 1 MKQYEVIGVIITLLGAVLWGVSGASVQFLSNFRDMNLEWLVTMR-LITAGLLTVIYAWFR 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G S+ +G+++F +A+ + ++ + + ++ P + +
Sbjct: 60 FGNSIFNVFHSVKDTLGLIIFGVFGMALCQYTYFRSIALAGAGIATVLQYLAPSMIIIYL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKT 187
V +R + + ++ +L ++ + + + + +L + ++
Sbjct: 120 LVRYGKRPSKGETVSVILALVGTICLMGNGDGLSIKSFPMAVLVWGLLSAVGVAVYSISP 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + G + + + L F +
Sbjct: 180 VDLLYKYGTLPIVGFGMFISGIVAAILFHQPNSYAVWDAWTIIGCFNVIFLGTIVSFNAY 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G+KR I+ P+ L + I +++ +V+ L +
Sbjct: 240 LEGVKRIGAVPGSILSSIEPISAAFFGWAFLGNEFSLLGLIGMAMIIATVVIIALESGRG 299
Query: 308 SGKNKTKKS 316
+ K ++
Sbjct: 300 TWKKSNGRA 308
>gi|293605672|ref|ZP_06688050.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815910|gb|EFF75013.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 319
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 92/310 (29%), Gaps = 14/310 (4%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSL 64
+ + + +S ++G L + + +++ V +L + R + L
Sbjct: 3 PADQRRPPAPAPSSRGPLVGILLLVLSMWTLSCLDASGKWVMNAGVPLLVLSWFRYVVHL 62
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
V ++ G L + + + + + F L +
Sbjct: 63 ILVLALVLPARGLRVLRSNRPRE------QLIRGGSMFLATLMFFTTLSYIPQAEATAIN 116
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA 184
F+ P++ + L LKE + +AA + + ++I+ G I +A CFA
Sbjct: 117 FLAPLLVLSLAPWVLKEPARLSRFVAAGIAFIGVIIVIRPGGGLHPIGTIFGLLTACCFA 176
Query: 185 RKTIPVG------SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ I V + + + + + D LI GL
Sbjct: 177 AQFIATRRVAGDDPFTSLIWSGAVGTVCLTVTLPFVLPAALPVLQSLSGFDWFLLISTGL 236
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+RA ST+ Y + + D + + I+ + +
Sbjct: 237 TGGVGHLFQIAAYRRAPASTLAPFIYLQIISATSVGWLVWGHFPDPLTWLGIAIICASGI 296
Query: 299 VYLLPTVINS 308
L S
Sbjct: 297 GIGLVEWRRS 306
>gi|218460999|ref|ZP_03501090.1| putative transmembrane transporter [Rhizobium etli Kim 5]
Length = 305
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 94/284 (33%), Gaps = 8/284 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N M G + + +L+ + ++L +V +V+ R L + + I G
Sbjct: 9 NTGNLIMTGVVLMLLGDLLFALNDAMGKWLMSSFAVGQVLVIRSLGAFIVLGPMI-ARQG 67
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L + K + + + + + + A+ Y P+ L
Sbjct: 68 PRALFRVEQKGLQFMRVAMATGDVALF-----YAAVAYLPLADVMTFYMAGPIYIAALSH 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL E++ + +A L+ ++I S L + ++CFA +
Sbjct: 123 FFLGEKIGWRRWLAVLIGFAGVVIALRPSTAMLSLPSFFGLAGSFCFALSLVMSRYLRST 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V V G S G + + L+ ++ + + + +K A
Sbjct: 183 SDTTLVTWQTVAALVTGIGLSIGHWQPATPVDWSGMLLLG-IVATCAHLLITRSLKLAPA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S + ++YT L IV D I I+V A +
Sbjct: 242 SLLAPLQYTLLLWAIVLGYIFFNDIPDMQIVIGAAIIVFAGLFI 285
>gi|193078511|gb|ABO13519.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
Length = 297
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 88/289 (30%), Gaps = 1/289 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASVFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + +F +
Sbjct: 69 PLKWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEQI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 SFKQWLCILLGLCGAVLVVSGDHGFGMPSPYSLLIVLAAIAWGLYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ L + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTLPLLFYSAHLPSEILHATWQANMSVVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVLFLNEKPSIIVLLGGVIIVGSLVWMNWGRKK 297
>gi|190890323|ref|YP_001976865.1| transporter permease [Rhizobium etli CIAT 652]
gi|190695602|gb|ACE89687.1| putative transporter permease protein [Rhizobium etli CIAT 652]
Length = 299
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 86/288 (29%), Gaps = 4/288 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ AS + + G +P++ + L +V + RV +L +F +
Sbjct: 7 TLSEASPSNRLALAALVLGGAAIGGSPIFVR-LSEVGPMATAFWRVALALIPIFIVSLLK 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ V V A LA + L + + +I+V
Sbjct: 66 KNAGPRPQSLADYFMLVLPGVMLALDLAAWHLSLTMTSVANATLLANLAPVFVTLIAVLF 125
Query: 135 GSVFLKERLNHLQIIAALLIIL---SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
++A +++ ++ + IA + A
Sbjct: 126 FRARTSGVFLLGLLLALAGVVILKGGPASLSNGDLRGDGTAMIAAFFYACYILAIGRLRS 185
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I + A A+ F G ++ + ++ +Y +
Sbjct: 186 RFDTIRIMLWSTASAAVCVFPLAFFFEGHMLPATPYGWSMLFGLAFISHAGGQVAITYAL 245
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P++ + + +L + I T++ + +V+ ++V
Sbjct: 246 AYLPPAFSSLTLLLQPVVAAILAWALLNETIGTMQALGAAVVLAGIMV 293
>gi|170756424|ref|YP_001780972.1| putative transporter [Clostridium botulinum B1 str. Okra]
gi|169121636|gb|ACA45472.1| putative transporter [Clostridium botulinum B1 str. Okra]
Length = 324
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/304 (10%), Positives = 80/304 (26%), Gaps = 11/304 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + V A + WG + T+ L + S+P +F+ I F SL
Sbjct: 6 NNKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFKKDPSL 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV-FLGSVFL 139
K K + LL V+++ +
Sbjct: 66 FKVDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEK 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR----------KTIP 189
+ ++ L+ + M L S I + +
Sbjct: 126 FTTQKAISMLLILIGCFMMCEMHKLGSFNLSSKGIFWGLISGFTFALQILLAKVSNEKYH 185
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ AI ++ + + +
Sbjct: 186 YNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFQSSNNLFFLFKNIFWSVIGTLIANTAYVK 245
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + S ++ ++ V + Q ++ V+ + ++++++++ + +
Sbjct: 246 SVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKKSVLLK 305
Query: 310 KNKT 313
K
Sbjct: 306 LFKR 309
>gi|149203630|ref|ZP_01880599.1| hypothetical protein RTM1035_06178 [Roseovarius sp. TM1035]
gi|149142747|gb|EDM30789.1| hypothetical protein RTM1035_06178 [Roseovarius sp. TM1035]
Length = 342
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/309 (14%), Positives = 93/309 (30%), Gaps = 23/309 (7%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVI-SHRVLWSLPGVFFAIVYFSG 76
A + G L V A +L+ + L + + ++ R + +L + I++
Sbjct: 10 PAPSRALQGILCVEIAMLLFVGQDAMMKTLLTIYPVWLLIFVRSIVTLLVMTPLILWLGK 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LL + + A + A + F A S +F P+I+ +
Sbjct: 70 PHRLLTP------LWPLHLIRAFLFASGFSMFYAAFPFMGLAEVSTIFFSAPLITALFAA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS--- 193
VFL+E + + +A + + +LI +G +AI A +A I
Sbjct: 124 VFLRETIGWHRGVALVAGFVGVLIAMNPTGENFSLVAILPLLCAVTYAISQIIARQIGDR 183
Query: 194 -EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI------------GYGLLN 240
+ + L L + + + G +
Sbjct: 184 ESTLTVGLYTLTFAGLLILPMGWLVNQVIEITPATYHLRWEMPPQALDDLPRLALLGAIG 243
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + S + A S V +YT + + + + I+ + +
Sbjct: 244 MAAYTLVSRAYQVANASLVAPFDYTYLPFAALLAYVLWDEVPALNTLAGMVIITASGLYL 303
Query: 301 LLPTVINSG 309
+ S
Sbjct: 304 GWRELRASR 312
>gi|126734607|ref|ZP_01750353.1| hypothetical protein RCCS2_12059 [Roseobacter sp. CCS2]
gi|126715162|gb|EBA12027.1| hypothetical protein RCCS2_12059 [Roseobacter sp. CCS2]
Length = 317
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/307 (13%), Positives = 95/307 (30%), Gaps = 25/307 (8%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSG 76
+G + A + I + +FL L +V+ R + L + I +
Sbjct: 2 TQMSNAKLGAICATFAVTFFAINDVAIKFLSGGYALHQVVLIRSVIGLLIIVCVIAPMTT 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G +L + M +F + F L +F++P++
Sbjct: 62 GRALARTKKLK-----MHMFRGLCVVFANMTFFLGLAAMSLADAVAIFFISPLVITLFSV 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+FL E + + A + + +L+M ++ +A+ +A I G
Sbjct: 117 LFLGEVVGPRRWAAIGVGFIGVLVMMRPGTASFQVASLLPLAAAFFYAAIHITTRRIGGT 176
Query: 197 FIEMCVLAIPALFYVVW-------------------NGFSGGEHFFLGNIPDTLFLIGYG 237
+ L +++ + + + D + G
Sbjct: 177 ESAATMAFYIQLMFIIVGVSFGLIVGDGRFGDQSDPSLAFLFRAWSWPVVADYPVFLIIG 236
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + S + A+ S V EY A + ++ + I + D + +++ A
Sbjct: 237 VGIGLGGYLISQAYRVAEASYVAPFEYLALPMSVIFGMVIFGEFPDAWDYLGMVLILGAG 296
Query: 298 VVYLLPT 304
+ +
Sbjct: 297 LFTIWRE 303
>gi|153212841|ref|ZP_01948458.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124116219|gb|EAY35039.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 297
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 86/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQVSAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILDEPIGLNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|53714374|ref|YP_100366.1| putative integral membrane protein [Bacteroides fragilis YCH46]
gi|253564870|ref|ZP_04842326.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265766175|ref|ZP_06094216.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52217239|dbj|BAD49832.1| putative integral membrane protein [Bacteroides fragilis YCH46]
gi|251946335|gb|EES86712.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253843|gb|EEZ25308.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 310
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 95/291 (32%), Gaps = 15/291 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + A +G+ PL+T L E +SV V+ +R +++ + +
Sbjct: 4 NSKAKGFVCGAVAAATYGMNPLFTLPLYKEGMSVDSVLFYRYGFAVLILGILMKVQGQSF 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K+ + + + + + S FV PV+ + +F
Sbjct: 64 ALKKNEVLPLIV------GGLLFSASSLLLFLSYKHMDAGIASTILFVYPVMVALIMFLF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
E+++ L + LL + + ++ G LL + +++++ Y +
Sbjct: 118 FHEKVSLLTVFCILLALSGIGLLYKGEGGETLSLVGMLLVILSSLSYAVYIVGVNHSTLK 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ L Y+V F L L + I
Sbjct: 178 LMSTAKLTFYALLFGLSIYIVRLNFCSDLQAVPSLPAWGNILAMAFLPTVISLVCTAVSI 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ I+ P+ + V I + + + ++++A+ ++
Sbjct: 238 HTIGSTSTAILGALEPVTALFFGVMIFGERLTPRLMLGILMILVAVTFIVV 288
>gi|6323909|ref|NP_013980.1| hypothetical protein YMR253C [Saccharomyces cerevisiae S288c]
gi|2497208|sp|Q04835|YM87_YEAST RecName: Full=Uncharacterized membrane protein YMR253C
gi|732931|emb|CAA88580.1| unknown [Saccharomyces cerevisiae]
gi|151945961|gb|EDN64193.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|256271610|gb|EEU06652.1| YMR253C-like protein [Saccharomyces cerevisiae JAY291]
gi|285814259|tpg|DAA10154.1| TPA: hypothetical protein YMR253C [Saccharomyces cerevisiae S288c]
gi|323347060|gb|EGA81336.1| YMR253C-like protein [Saccharomyces cerevisiae Lalvin QA23]
Length = 414
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 37/312 (11%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS----------VLEVISHRVLWSLPGVFFAIVYF 74
+G + + +Y + T+ LE L+++ R++ + G +
Sbjct: 69 IGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYIN 128
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+S + P+ LV Y+L+ F+ P +++FL
Sbjct: 129 KSTISDVP--FGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFL 186
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------------------- 172
V L+ER ++ + +L+ +L ++++ S +
Sbjct: 187 SWVILRERFTKVEALGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRLIATL 246
Query: 173 ---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ S + I + + L + ++ N + +
Sbjct: 247 VGLWGVLGMSCVYIIIRYIGKRAHAIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQ 306
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + + GI+R + +M YT L + V + K + I
Sbjct: 307 WILFGNLGVSGFIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIG 366
Query: 290 FGIVVIAMVVYL 301
I++ A + +
Sbjct: 367 MIIIISATLWVI 378
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 48/152 (31%)
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ L+++T+ + + V+ ++
Sbjct: 68 NIGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYI 127
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S G +L+ G F Y + +S ++ + AP L I S
Sbjct: 128 NKSTISDVPFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLS 187
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
IL++ V + I ++ +V+ + P+ +
Sbjct: 188 WVILRERFTKVEALGSLISLLGVVLIVRPSFL 219
>gi|269926569|ref|YP_003323192.1| protein of unknown function DUF6 transmembrane [Thermobaculum
terrenum ATCC BAA-798]
gi|269790229|gb|ACZ42370.1| protein of unknown function DUF6 transmembrane [Thermobaculum
terrenum ATCC BAA-798]
Length = 310
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 90/292 (30%), Gaps = 14/292 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L V A +W + + +QV + R L + + F +
Sbjct: 12 GYLLVLSAATIWATIGPAYKLITRNQQVLPAQAAFLRCLTGFFFLLIVLAIFRPRALTID 71
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + +A + ++ A+ L + +P L + +ER
Sbjct: 72 ISDLPLFLAF----GSISIAGFYLAYVEAVSLLGVALAVTLLYTSPAWVTILSWILFRER 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI---- 198
+ LQ++A + +L +++ L + + + +
Sbjct: 128 PSRLQMMALISALLGCALLSEVYDTSQLRINLLGIIAGILSGITYAGYTLFGRITLRKYD 187
Query: 199 ---EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + L L ++ +
Sbjct: 188 PLSSVVWPIGIGSLILGAYSYITTGVPTPSLEAWGLILYLGVGPTVVAMVLYIASLNYIP 247
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S I+ PL+ I+ SV +++ ++ +++I ++++A+++ + +
Sbjct: 248 GSLASIVATAEPLIAILISVTFMEEKLNLIQSIGGALILLAVIMLQTGSSKS 299
>gi|326803264|ref|YP_004321082.1| hypothetical protein HMPREF9243_0775 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651574|gb|AEA01757.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 297
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/287 (9%), Positives = 89/287 (31%), Gaps = 11/287 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ A WG+ + +Q L + L++ +R+L + + + + L
Sbjct: 8 RKRAIITTILACSSWGLGGVLSQHLMQTYNMMPLQLTMYRMLTAGISICLFL-AYKRKLP 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + + +F + + ++ + + + F+ P+ + +
Sbjct: 67 IEKLKNDKRSLLQIAIFGICGIVFNQFSYLMTIHYSNSGMATILQFIGPIFLLVYYCLVG 126
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ +I+A L I+ + ++ H + + + V
Sbjct: 127 RRWPIRREIVALLFTIIGVFLLVTHGQLGHFVLSTEAFFWGLMSAFGLALLNVLPLRVIE 186
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + ++++ F L F + + + + +
Sbjct: 187 HYGSLPVTGIGMLFGGIFLIFFNFEHLVPPELSLHFLAWFTLTIIVGTIVPYIFYLSSVT 246
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ PL + SV +L + + + +++ + +
Sbjct: 247 FIGPLAASLIGSVEPLTATILSVILLGESFALIDYLGMAFILLTVFL 293
>gi|169828267|ref|YP_001698425.1| putative transport protein [Lysinibacillus sphaericus C3-41]
gi|168992755|gb|ACA40295.1| Hypothetical transport protein [Lysinibacillus sphaericus C3-41]
Length = 288
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 89/282 (31%), Gaps = 15/282 (5%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +LWG + + + S L + + R L ++ + + K
Sbjct: 1 MLITSLLWGGNFVVAKTLVAHASPLTLTTVRWLIAVIVLVPLV-----WWKEKKLVPPKQ 55
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
V +++ T +A F AL + + V LKE++ Q+
Sbjct: 56 AIVPLMLMGVTGVAFFNIFQFLALERTTSTNAGLISTMNTISIALFSFVLLKEKITKWQL 115
Query: 149 IAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
A +L + ++++ L +A ++ + + +
Sbjct: 116 SAMILSLFGVVLVLSKGDWQLLLDFQFNTGDLWMLAAVCVWGLYSVCSKWAMQTTSPLMA 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
I + ++ + + L + ++ G+++ +T
Sbjct: 176 TFYAGIFGVLMLLPFTSTDFTFTNVNTSFILSMLYTGIISTVVCMVFWNIGVQKLGATTS 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
GI P+ + + + + + ++ I IV++ ++
Sbjct: 236 GIFLNFNPIFTALLAYLFIGENMSWLQGIGGLIVIVGCYLFT 277
>gi|254284814|ref|ZP_04959781.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|150425599|gb|EDN17375.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 297
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 86/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIAAHNFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQVSAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILDEPIGLNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|24214039|ref|NP_711520.1| permease [Leptospira interrogans serovar Lai str. 56601]
gi|45658232|ref|YP_002318.1| drug/metabolite exporter [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24194912|gb|AAN48538.1| permease [Leptospira interrogans serovar Lai str. 56601]
gi|45601474|gb|AAS70955.1| drug/metabolite exporter [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 309
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 103/296 (34%), Gaps = 13/296 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAI 71
+ + +GT V I + ++ + + + + ++ R+L+++P +
Sbjct: 4 MEVSESKWKPFLGTCIVLIGAIFFSAKAIFVKLVYRYDIDSITALTLRMLFAIPFFAWIA 63
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + T K+ + +L F + F L L + FV P I
Sbjct: 64 FRSKNTKTSVNLTKKDWGLIFILGFLG--FYLASLFDFIGLEYISAGLERLTLFVYPTIV 121
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYC 182
+ +GS K ++ ++ A L +L+ + L LA A+++S Y
Sbjct: 122 LIIGSFLFKRKIKKAEVFAIFLTYSGILVAFIGDIQTEGPNATKGVLFVLASAISYSLYL 181
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+++ F +L + + + ++ L L
Sbjct: 182 VGSESLIPKLGSVRFTSYLMLISGLIVVIHFFIVRNPKNLIQPPNVYLYGLALGILTTVI 241
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + GI+ I+ T P+ I+ + L++PI + +V+ ++
Sbjct: 242 PAYLTTEGIRMIGSGRAAIIGSTGPISTILLAWIFLEEPITSSGIAGTILVLTGVL 297
>gi|24645940|ref|NP_650076.1| CG5281 [Drosophila melanogaster]
gi|195571745|ref|XP_002103863.1| GD18756 [Drosophila simulans]
gi|7299451|gb|AAF54640.1| CG5281 [Drosophila melanogaster]
gi|194199790|gb|EDX13366.1| GD18756 [Drosophila simulans]
gi|211938733|gb|ACJ13263.1| RH69884p [Drosophila melanogaster]
Length = 347
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 88/292 (30%), Gaps = 13/292 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L + + + + + + L V+ +E+ S R + L ++Y + +
Sbjct: 38 LGILLATLSSLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQ--PVFPEG 95
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + ++ + F L + S FV FL +
Sbjct: 96 KRVILLLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCTLFNVL 155
Query: 145 HLQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + +++++ +A + + +
Sbjct: 156 TINMTLLGVVLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISSTLFGANVYILLRALKN 215
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F + M AL Y + S G + D ++ G+ + + + ++
Sbjct: 216 LHFSVIMTNFGTIALVYTLIVCASIGAVCWPSCGRDRWLVVVLGVFSFLGQILLTLSLQI 275
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ V I + V + + + +V+ ++V+ L
Sbjct: 276 EQAGPVAIARCADIVFAFVWQMLFFGETPTAYSLVGAVMVMGSVVLTALKKW 327
>gi|228983667|ref|ZP_04143869.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228776074|gb|EEM24438.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 330
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 49/333 (14%), Positives = 105/333 (31%), Gaps = 24/333 (7%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGT-LFVFCAYILWGITPLYTQFLE---QVSVLEV- 55
M K + K +G + A LWG + + + EV
Sbjct: 1 MNIVRKKDRKGRQQVKTEKIFTHPIGVFIAAIVATFLWGSAFPFIKLSYAELGIQPKEVG 60
Query: 56 -----ISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIY 110
+R S + F ++ K T K ++ + + F
Sbjct: 61 EQILFAGYRFFLSGVMLLFFFKALGKDMNFKKGTGKQ-----LVQIGLFQTFLQYICFYI 115
Query: 111 ALLTRQGFLTSFSYFVTPVISVFLGSV-FLKERLNHLQIIAALLIILSLLI--------M 161
+ G + + + L + + LN ++I + +++ +
Sbjct: 116 GMSYSSGIEGAIISGTSSFFQILLAHFLYKDDALNVRKVIGVSIGFCGVMLVNVPSDGSL 175
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ H GI L L A +Y + + ++ + ++ + G
Sbjct: 176 SFHFGIGSLLLLSAAMLYSYGNILAKEGSKTLDIGYMTAYQMIFGSIGLLCIGALQVGVM 235
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
F +I L LI L++ FCI++ +K K+ V + + P+ ++ S IL +
Sbjct: 236 PFTFSIHAILMLIYLSFLSAAGFCIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEA 295
Query: 282 IDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I + V ++V + + +
Sbjct: 296 IHSFVLFGLACVAAGIIVVNRVPAKQKMEKEKQ 328
>gi|91776926|ref|YP_546682.1| hypothetical protein Mfla_2576 [Methylobacillus flagellatus KT]
gi|91710913|gb|ABE50841.1| protein of unknown function DUF6, transmembrane [Methylobacillus
flagellatus KT]
Length = 329
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 87/277 (31%), Gaps = 17/277 (6%)
Query: 36 LWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
W + + + + + R + +L + L + +L
Sbjct: 50 FWAGNFVVGRAVHTDIPPFTLSLGRWVIALLCILPFAWPTMRRDLPLYWQYRWR----LL 105
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
S +A L P++ + G++F + RL+ LQ++ L
Sbjct: 106 AVSVVGVAAFNTLVYSGLHHTTATNGILLNSCIPILILLFGAMFYRLRLHSLQLLGLALS 165
Query: 155 ILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+L + LH G ++ A+ + R G +
Sbjct: 166 FFGVLTIILHGEWERLLSLAFSSGDLVIFTAMICWALYTLWLRDLPASIHRLGLMGAQIM 225
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+A+ L + + G+H G + + +++ G+++A + G+
Sbjct: 226 VAVIVLLPLFIWEQAHGQHARWGQETWLALAYVGIFPSVIAYTLYTIGVEKAGAARAGLF 285
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ + SV L + + I ++ + +
Sbjct: 286 IHLMPVFGSLLSVIFLGEHLHLFHAIGIAAILGGLAL 322
>gi|261866939|ref|YP_003254861.1| shikimate 5-dehydrogenase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412271|gb|ACX81642.1| shikimate 5-dehydrogenase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 293
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 58/294 (19%), Positives = 119/294 (40%), Gaps = 6/294 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSL 80
+ G F A +L+G ++ L +S ++ +R++++LP V A+V F ++
Sbjct: 2 LKGIAFSLFASLLFGYMYYFSTLLLPLSGTDIFGYRIVFTLPFVAAAVVLFKQQAALVAH 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK K P VF+ ++ F++A SF Y + P++ V + K
Sbjct: 62 LKRIQKKPHFALAFVFTGALIGFQMWLFLWAPNNGSSLSVSFGYLLLPLVMVAAARLIFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ ++ +A ++ + +L + G +S +V Y +
Sbjct: 122 ERISRIKFLAVVIAAVGVLSNIVLKGE--ISWEASVICVGYTTYFVVRRILKMTDLAAFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ F V ++ N L+ GL++ + ++ +G
Sbjct: 180 LEMLTLLPFCVYFSWQVDIAQVQQSNPNILTLLLILGLISGTALNSYILASNHLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P LM+ S+ I + ID +F +VIAM++ + V + + T+
Sbjct: 240 LLGYVEPCLMVGISLLI-GEEIDAQSYPLFICLVIAMLLIIADGVWRTKHSPTR 292
>gi|212633652|ref|YP_002310177.1| membrane protein [Shewanella piezotolerans WP3]
gi|212555136|gb|ACJ27590.1| Membrane protein [Shewanella piezotolerans WP3]
Length = 298
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 113/293 (38%), Gaps = 9/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + + A +L+G T L+++ + +S L++ R + + + + ++L
Sbjct: 4 NDKKTGLVELHLAVLLFGGTALFSKLI-PLSALDITVLRCVVAAAVLSLIVKLSKQKIAL 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + I+++HW + ++ + ++F PV++V + K
Sbjct: 63 EAAKD-----YWVAIGLGVIVSLHWVTYFASMQLSSVAIGMIAFFTYPVMTVLAEPLVTK 117
Query: 141 ERLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L +I+ +L+++ + ++ L + I + +A AR + +
Sbjct: 118 SKLQLADVISGVLVLIGVSLLIPEASLGNDVTLGIVIGIVSAALFTARNLLHKRYFSQYS 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ +L A+ V + E + + L ++ + + +F+ ++
Sbjct: 178 GQQAMLYQTAVAVVFLAPWLSVEVSTIESNVWWLIILLGTIFTAAPHALFTSALRLLSAK 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TVG++ P V ++ +L + +D I +VV + + +
Sbjct: 238 TVGLVSCLQPFYGAVLALLLLGEDLDIKTIIGGTLVVATALFETQQSHNGLKR 290
>gi|189913028|ref|YP_001964917.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167777704|gb|ABZ96004.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
Length = 306
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 95/298 (31%), Gaps = 14/298 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY 73
+ S G FV +L+ + + ++S + + R+L++ P + +
Sbjct: 1 MKENSHVEWKGIAFVLTGALLFSAKAVVVKLTYRYEISAIGSLFFRMLFAFPFL--VWMA 58
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+S K L +L+ + F L L F+ P + V
Sbjct: 59 WSAEKETEKPNLTKKDYWNVLLMGVVGYYLASLFDFVGLKYISAGLERIILFIYPTLVVL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L FLK++++ +I + +L + + +++ + T +
Sbjct: 119 LSFFFLKKKIHMREIFSLILTYTGVFLAYGQDVQLGSPKDVSLGAFFILLSALTYAIYLM 178
Query: 194 EG----------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
F ++ + ++ + F + L + +
Sbjct: 179 GSGSIVPKLGAKRFTAWALIISSIVVFLHFFIFGTYKELIQPMSFYLLAFVMGTVNTVVP 238
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ S GIKR T I+ P+ + + L +PI V +I V+ +
Sbjct: 239 AVLVSEGIKRVGSKTAAIVGSIGPMSTLFLAYVFLDEPITIVHSIGTLFVLTGVFWIS 296
>gi|291532211|emb|CBL05324.1| EamA-like transporter family [Megamonas hypermegale ART12/1]
Length = 288
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 87/283 (30%), Gaps = 15/283 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G +F+ A +WG + + + + + ++ R L + + ++Y L +
Sbjct: 3 NRVLGGIFLTIAASIWGGMFVAVKLVVDIIPPIPLVWFRYLVAFVVLSMVVIYEGINLKI 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + ++ + Y + + S TP + LK
Sbjct: 63 DK-----KDILLLISIGIIGHTISIVTQEYGTMYSSAQMGSVVTSATPAFMLIFAVWLLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCFARKTIPVG 191
E++ +I++ +L + ++++ + A+ +
Sbjct: 118 EKITLRKILSVILATVGVIMIAGVDNMDFDKQLGVLFSTIAALTWALMSVMLKLIPSKYP 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + + + L + + + + F +++ G+
Sbjct: 178 PLLINFYAVITGIVCLAPLNIPTLDLLPWDEILNPVAIGSVVYLGAVSTAGAFLLWNKGL 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ G+ + P++ IL + I I ++
Sbjct: 238 LLMEAGASGLFFFFQPIVGTFLGWLILDEQITLNFWIGSILIF 280
>gi|224824696|ref|ZP_03697803.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
gi|224603189|gb|EEG09365.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
Length = 296
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 92/287 (32%), Gaps = 16/287 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+ L + A +LW + + +++ V + V+ R++ + + ++ ++
Sbjct: 1 MLPYLALSLAMLLWASSFIALKYVFSVFDPMVVLFARMVIATLCLLPLML-----RPGVR 55
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + +++ AL+ P+++ +FLKER
Sbjct: 56 RRYQQGDWKWLAALALAEPCLYFLLEARALVYTSASQAGVITATLPLLTSLGALLFLKER 115
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCFARKTIPVGSS 193
L + + +L +TL + +A+ +
Sbjct: 116 LGRTVWLGIAVSFAGVLWLTLTGEQSADAPNPLLGNALEFLAMVCATGYILIAKKLSVRY 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + L++ L P L + + ++++ +
Sbjct: 176 SALVITAAQTVLGMLWFGALLFTPWVTLPQTLPLWPSLWVLYLGAGITLGAYGLYTWSVS 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
R + G P+ ++ + IL + + + + +V +++
Sbjct: 236 RVPVVMAGAFVNLIPVFTVLLAWIILGETLSAQQQLACLLVFGGVLI 282
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 36/131 (27%), Gaps = 1/131 (0%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+A+ A F + + + I L + G
Sbjct: 9 LAMLLWASSFIALKYVFSVFDPMVVLFARMVIATLCLLPLM-LRPGVRRRYQQGDWKWLA 67
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F + + + S G++ T PLL + ++ LK+ + + +
Sbjct: 68 ALALAEPCLYFLLEARALVYTSASQAGVITATLPLLTSLGALLFLKERLGRTVWLGIAVS 127
Query: 294 VIAMVVYLLPT 304
++ L
Sbjct: 128 FAGVLWLTLTG 138
>gi|217976788|ref|YP_002360935.1| protein of unknown function DUF6 transmembrane [Methylocella
silvestris BL2]
gi|217502164|gb|ACK49573.1| protein of unknown function DUF6 transmembrane [Methylocella
silvestris BL2]
Length = 305
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 94/310 (30%), Gaps = 9/310 (2%)
Query: 1 MGKGATKKEYSKGLSK-ENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISH 58
M A+ + GL+ AS G L++ +L+ + L E+
Sbjct: 1 MAPSASTQSDLPGLTPIPGASASIASGILWMLLTTLLFVCQDSTARILLAHYPATEIAFG 60
Query: 59 RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGF 118
R V + + L + ++ L + F + +L
Sbjct: 61 RYFVHFALVGAFLALRAPRLLRSRRPALQLTR-------SSFLLANTLFGMLSLKIMPFL 113
Query: 119 LTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW 178
S +V PV+ L V L E+++ I+ + + + I+ + +G + +L I
Sbjct: 114 DFSAVVWVAPVLVTALSIVVLHEKVSLTGWISVFIGLAGVWIIVVGAGFSVSALMILPLM 173
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+A A I + L A+ V+ D + G+
Sbjct: 174 AALTNALYQIATRFLRTADAPLTTLFYTAIAGTVFCALFLPFVAVRPTPGDLALMTLLGV 233
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
L A + + YTA L + SV I + I ++V A +
Sbjct: 234 LGVASHFCIIRAFAAAPANVIAPFGYTALLWASLFSVVIFAEIPTLRTIIGSCLIVGAGL 293
Query: 299 VYLLPTVINS 308
Sbjct: 294 AIFFGPRAKR 303
>gi|153940285|ref|YP_001390698.1| putative transporter [Clostridium botulinum F str. Langeland]
gi|152936181|gb|ABS41679.1| putative transporter [Clostridium botulinum F str. Langeland]
gi|295318772|gb|ADF99149.1| putative transporter [Clostridium botulinum F str. 230613]
Length = 324
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/304 (9%), Positives = 80/304 (26%), Gaps = 11/304 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + V A + WG + T+ L + S+P +F+ I F SL
Sbjct: 6 NNKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFRRDPSL 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV-FLGSVFL 139
K K + LL V+++ +
Sbjct: 66 FKVDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEK 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR----------KTIP 189
+ ++ L+ + M L + I + +
Sbjct: 126 FTTQKAISMLLILIGCFMMCEMHKLGSFNLSTKGIFWGLISGFTFALQILLAKVSNEKYH 185
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ AI ++ + + +
Sbjct: 186 YNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFKSSNNLFFLFKNIFWSVIGTLIANTAYVK 245
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + S ++ ++ V + Q ++ V+ + ++++++++ + +
Sbjct: 246 SVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKKSVLLK 305
Query: 310 KNKT 313
K
Sbjct: 306 LFKR 309
>gi|304393607|ref|ZP_07375535.1| putative integral membrane protein [Ahrensia sp. R2A130]
gi|303294614|gb|EFL88986.1| putative integral membrane protein [Ahrensia sp. R2A130]
Length = 310
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 84/287 (29%), Gaps = 9/287 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G+L +F A + + L + + + V +++ R + + V ++
Sbjct: 16 NVKGSLMIFAAAFGFSVMVLLVKVAGERLHVTQILLVRQVVMMAIVMPQVM-------KE 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + V A++ F LKE
Sbjct: 69 FPGCLRTSRLDLQIIRVALALVAMLAGFTAIIEMPLADAVAIGFAKSFFVTIFAIWLLKE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + +A + L +L+M ++ A + + +
Sbjct: 129 QVGWRRWMAVAVGFLGVLVMVQPGSSGFDPYSLYALAGAAAAGLVMVIIRLLSRTDEPIT 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+LA A + + + + + L+ G+ + Y K + S +
Sbjct: 189 ILAYQAFLVGLCVAIPAIYFWQWPTVTEWVLLLAMGVTSFAAQMGNIYAYKWGEASVLAS 248
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++Y L I + +++ A +Y +
Sbjct: 249 LDYVRLLYATFFGWLIFDTLPGPYTWVGSVVIIAA-ALYTVQRERAR 294
>gi|225862452|ref|YP_002747830.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|225788384|gb|ACO28601.1| transporter, EamA family [Bacillus cereus 03BB102]
Length = 330
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 95/300 (31%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYAELGIQPKEVGEQILFAGYRFFLSGVMLLLFFKVLGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 88 MSFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 143 LYKDDALNMRKVIGVSIGFCGVVLVNVQSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L L+ L++ FCI++
Sbjct: 203 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSVHAILMLMYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVATGIIVVNRAPAKQK 322
>gi|190894671|ref|YP_001984964.1| hypothetical protein RHECIAT_PC0000334 [Rhizobium etli CIAT 652]
gi|190700332|gb|ACE94414.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
Length = 305
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/290 (10%), Positives = 81/290 (27%), Gaps = 14/290 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++ + + W + + + L ++ +E+ + R + + + +
Sbjct: 23 LVAFAAIVVTILFWASSFVVIRICLGPLTPIELATARYVAAGALALIYLAIYRPIPE--- 79
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + V + +A + T SF PV + + + L ER
Sbjct: 80 ----KRDVLRLSVAAVLFIAAYAVLLNTGEQTVAAGPASFIINTMPVFTALIATFALGER 135
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
+ + ++ + S A SA + +G
Sbjct: 136 FGRWGWAGTAVSFGGVALIAVASDDGFKLDPNAVLILGAALCSAIASVLQKPLLGRLPAL 195
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +L I ++ + + + + ++ +KR
Sbjct: 196 AVTAWILLIGSVPLFPAVPATVRALAAAPAEVNWGVAYLVIFPTAIGYLTWAIALKRLTA 255
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y P + + + L + + I + ++ ++V L
Sbjct: 256 GRASNFLYGGPPVATLIGLVWLGEMPTALGAIGGVMAILGVLVVNLMRKR 305
>gi|238791916|ref|ZP_04635552.1| hypothetical protein yinte0001_8090 [Yersinia intermedia ATCC
29909]
gi|238728547|gb|EEQ20065.1| hypothetical protein yinte0001_8090 [Yersinia intermedia ATCC
29909]
Length = 343
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/308 (11%), Positives = 90/308 (29%), Gaps = 35/308 (11%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + +L G T + + L + + R + ++ +
Sbjct: 25 KRQGYLLAIISAMLLGFTGIIIRILTAHYHLPTSVLAFWRAALVAVVLLPILLLTKPEWA 84
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ +LAV G + ++ +++ + + +VFLG +F
Sbjct: 85 KLRGCQLKFYTAY-----GLLLAVFNGLWTESVALNGASISTILVYCSIGFTVFLGWIFY 139
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + +++ ++ +L +++ I + + E
Sbjct: 140 NEYMGWRELLVMVISLLGCFLVSDGLNITGSDFNFVGLFIGLASGIGYSFYTLAGRIATE 199
Query: 200 MCVLAIPALFYVVWN---------------------------GFSGGEHFFLGNIPDTLF 232
+ YV F + L
Sbjct: 200 RRYPVWNTILYVFGFSAIYQLIFNQLLLWFPLPGLQQMVGDLFFLSHRADGIQWSGWGLL 259
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
LI F +F+ +K L+ ++ + V + F+L + + + + +
Sbjct: 260 LILAAGPTLLGFGLFNLSLKTLPLAVASLLLTLELVFTAVIAYFLLGETLSPSQLLGSAL 319
Query: 293 VVIAMVVY 300
V++ +++
Sbjct: 320 VLLGVLML 327
>gi|330876750|gb|EGH10899.1| hypothetical protein PSYMP_15269 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 295
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 86/287 (29%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F+ A L+ +++L + ++ + ++ +
Sbjct: 12 NQPLKGIGFILLATFLFASHDTLSKYLSGFYPIILVVW-----ARYLVHTLLMACIFMPS 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K G+ V A L F +L+ + F+ P++ L L
Sbjct: 67 AGLRVLRTKRPGLQVLRALALLGTSLLFTSSLMFIPQAEATAVNFLAPLLVTALSVPLLH 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ H Q IA ++ + ++I+ G + SA CFA + F
Sbjct: 127 ERVTHGQWIAVVVGFVGVMIIIHPGGELFTPAILLPLSSALCFALYQLLTRLVSPFDSPT 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LF + + + + FL+ G + + + A + +
Sbjct: 187 TSNFFAGLFNTLLMSALVPFFWEVPALKHLPFLLALGACGMSAHLLLTQAFRFAAPAMLA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + I+ ++ + N
Sbjct: 247 PFSYCQIVFAGLLGFLVFDHMPSHTAQAGIAIICLSGLAAAWQQRRN 293
>gi|301163859|emb|CBW23414.1| putative membrane protein [Bacteroides fragilis 638R]
Length = 314
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 95/291 (32%), Gaps = 15/291 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + A +G+ PL+T L E +SV V+ +R +++ + +
Sbjct: 8 NSKAKGFVCGAVAAATYGMNPLFTLPLYKEGMSVDSVLFYRYGFAVLILGILMKVQRQSF 67
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K+ + + + + + S FV PV+ + +F
Sbjct: 68 ALKKNEVLPLIV------GGLLFSASSLLLFLSYKHMDAGIASTILFVYPVMVALIMFLF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
E+++ L + LL + + ++ G LL + +++++ Y +
Sbjct: 122 FHEKVSLLTVFCILLALSGIGLLYKGEGGETLSLVGMLLVILSSLSYAVYIVGVNHSTLK 181
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ L Y+V F L L + I
Sbjct: 182 LMSTAKLTFYALLFGLSIYIVRLNFCSDLQAVPSLPAWGNILAMAFLPTVISLVCTAVSI 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ I+ P+ + V I + + + ++++A+ ++
Sbjct: 242 HTIGSTSTAILGALEPVTALFFGVMIFGERLTPRLMLGILMILVAVTFIVV 292
>gi|256027200|ref|ZP_05441034.1| transporter [Fusobacterium sp. D11]
gi|289765177|ref|ZP_06524555.1| transporter [Fusobacterium sp. D11]
gi|289716732|gb|EFD80744.1| transporter [Fusobacterium sp. D11]
Length = 302
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L +F A +WG + ++++ R + ++ + ++
Sbjct: 1 MDKKRYFGDLMLFLAAFIWGTAFVAQVTGMDKIGPFTFNMARSVIAIICLGAYLIITKAK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L V + + L T F +I FL +
Sbjct: 61 LPKDIGVLLQGGLVC-----GFFIFMGTSLQQIGLQYTTAGKTGFITSFYILIIPFLTMI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVG 191
FLK +++ L ++ ++ + L ++ + S + A
Sbjct: 116 FLKHKIDLLTWVSIIIGFIGLYLLAIPSLNDFTINKGDFIVFLGSFCWAGHILIIDYYSK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP--DTLFLIGYGLLNSFVFCIFSY 249
+ + + + E + NI L + + +
Sbjct: 176 KVNPVELSFLQFVVLTILSGICALLFENETATMNNIFLSWKSIAYAGLLSSGIAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K ++ + ++ F+L + + + + IV +A++ +P I
Sbjct: 236 GQKYTNPVVASLILSLEAVFAALAGYFMLDEIMTSREFLGCSIVFLAIIFSQIPKDIFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|21241368|ref|NP_640950.1| hypothetical protein XAC0597 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106698|gb|AAM35486.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 294
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 97/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L F Y + I+ + + LE + + VL+ + V F
Sbjct: 5 LKGVLLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPDDQLR 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L +FLKE +
Sbjct: 61 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEV 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 121 HWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVIALRMAGHSEKRLTLY 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V G F + L GYGLL Y + A +S V +
Sbjct: 181 GAGVIGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 241 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 292
>gi|26990381|ref|NP_745806.1| hypothetical protein PP_3670 [Pseudomonas putida KT2440]
gi|24985342|gb|AAN69270.1|AE016561_8 membrane protein, putative [Pseudomonas putida KT2440]
Length = 292
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 82/282 (29%), Gaps = 5/282 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G V A L+ ++FL + + ++ V ++ L
Sbjct: 11 NQPLRGIALVVVATFLFASHDALSKFLGGLYPIVMVVW-----ARYVVHTLLMAGIFLPK 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + A L F L + F+ PV+ L + LK
Sbjct: 66 SGLNVLRTRRPVLQTLRALSLLSTSLLFTTGLQYLPLAEATAVNFLAPVLVTALSAPLLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ Q +A ++ + +L++ G + SA F +
Sbjct: 126 ERVTVGQWVAVVMGFIGVLVVVHPGGAMFTPAILYPFGSALGFCFYQLLTRILAAHDSPT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + L ++ G + + + A + +
Sbjct: 186 TSNFYAGLCNTLAMSALVPFFWEVPRWDHALLMLALGGFGMTAHLLLTQAFRHAAPALLA 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y + + + Q DT+ + ++ ++ +
Sbjct: 246 PFSYCQIVFAGLLGFVVYSQVPDTLSLVGILVICLSGLGAAW 287
>gi|332290326|ref|YP_004421178.1| conserved hypothetical protein, EamA-like transporter family
[Gallibacterium anatis UMN179]
gi|330433222|gb|AEC18281.1| conserved hypothetical protein, EamA-like transporter family
[Gallibacterium anatis UMN179]
Length = 295
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 98/294 (33%), Gaps = 13/294 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + +F IL + ++++ L + I R + L
Sbjct: 7 IGEIILFFVSILAALGWFFSKYALVGFPPVGFIGLRFFSAALLFLPFAYPQFKRL----- 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + A + I + +F ++ +I+ + + + +
Sbjct: 62 --TRTEVMRASATGLLFAAFMATWIIAITYSNNLGEGAFLMSISMLIAPLISWLVFRNKP 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSEGFFI 198
IA + + + ++ + G +A +SA F S +
Sbjct: 120 LRSFWIALPIALSGVYLLAISKGELHFSADSLFYLLASLFSASYFVLHNQYSKSIPALAL 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L++ + + ++ + I + +F + + + G + ++
Sbjct: 180 TTLQLSVVGVLCLSYSLIVEPWKSEIPTSAIMWLTISVLIGTNFRYMLQTIGQRYCNIAN 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
I+ P+ ++ SV+ L + + ++ +++ A+++Y + +I + K
Sbjct: 240 ASIIMLLEPVWTMIMSVWWLDEQLTALKLAGSVLILAALLIYRIKNLIAFIRRK 293
>gi|254499085|ref|ZP_05111777.1| integral membrane protein [Legionella drancourtii LLAP12]
gi|254351712|gb|EET10555.1| integral membrane protein [Legionella drancourtii LLAP12]
Length = 314
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/285 (10%), Positives = 86/285 (30%), Gaps = 4/285 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G+++ + L+G + +S ++ R S + + +
Sbjct: 16 RGSIYAILSGFLYGFIGYFGISAMNGHMSASTMLFWRFFISSSVILVVLFPQLKKPTDTY 75
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
++N G++ + + L + + Y V ++ F+ +
Sbjct: 76 KQMRNAFLTGVVYYGLSTLLYFLACQYISSGLSMVIFFT--YPVLIMLINFVVYKQQIPK 133
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +L I LL + L+ M S ++ Y S + V
Sbjct: 134 IYYLAITVILLGMTFLVDMNAFSVNLWGIFFGIISAFFYAGYIIASKRNSLSPNMSTLMV 193
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ + + F + + + Y +K I+
Sbjct: 194 CLGCMVTSLIVSLINHTFVFPSSSTVWLHLFGIAIVATVIPILLMLYSLKYISSEKASIL 253
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
P+ +++ + +L + + + I +++ ++ L I
Sbjct: 254 SVLEPVFVVIFGILLLGESLRFLSAIGIVLILTGALITLFSHKIR 298
>gi|228932009|ref|ZP_04094901.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228827592|gb|EEM73334.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 310
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 101/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFEQRKFPAPIQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQ 298
>gi|205354486|ref|YP_002228287.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205274267|emb|CAR39286.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326629620|gb|EGE35963.1| chloramphenicol-sensitive protein RarD [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 253
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 2/253 (0%)
Query: 60 VLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFL 119
++WS + A++ S +K LK PK + +L SA ++ +W FI+A+
Sbjct: 1 MIWSFFFMV-ALLSVSRQWRQVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLE 59
Query: 120 TSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTW 178
S YF+ P++++ LG +FL ER +Q +A +L + +L+ G P+++L +A ++
Sbjct: 60 ASLGYFINPLVNILLGMIFLGERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSF 119
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ Y RK I V + G +E L A Y+ S H + L L+ G+
Sbjct: 120 AFYGLVRKKIAVEAQTGMLVETLWLLPVAAIYLFGIADSPTSHMGQNALSLNLLLMAAGV 179
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + F+ R +LST+G +Y P LM + +V + + + F + +A+
Sbjct: 180 VTTIPLLCFTGAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALA 239
Query: 299 VYLLPTVINSGKN 311
++++ + +
Sbjct: 240 IFVMDAIYTQRRK 252
>gi|148359451|ref|YP_001250658.1| integral membrane protein [Legionella pneumophila str. Corby]
gi|148281224|gb|ABQ55312.1| integral membrane protein [Legionella pneumophila str. Corby]
gi|307610610|emb|CBX00198.1| hypothetical protein LPW_19431 [Legionella pneumophila 130b]
Length = 300
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 84/297 (28%), Gaps = 10/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G+ + + L+G + +S ++ R L S + ++
Sbjct: 1 MNSQEQRGSFYAILSGFLYGFIGYFGISAIHGDLSASNMLFWRFLISSIFILIVLI---- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + YA L L+ +F PVI +
Sbjct: 57 -PQLKNINDTYKSMFTAFLSGVLYYGLSTLLYFYASLYIGSGLSMVIFFTYPVIIMVFNY 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSS 193
F + + + +A +I++ + ++ + I I + Y +
Sbjct: 116 FFYSQTIPKIYYLAISVILIGMALLIDVNEIAFDLWGIFLGLASAFFYACYIVSSKNNEI 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V ++ + + + +K
Sbjct: 176 SPNVSTLMVCLGCMTTSLIVACLDQTFKVPTSFPVWLNLFGIGLVATVIPILLMLHSLKY 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ P+ +++ V +L + + + +V+ ++ L IN +
Sbjct: 236 ISSEKASILSVLEPVFVVIFGVVLLGEELKPWHALGIVLVLAGALITLFSHRINLNQ 292
>gi|46579360|ref|YP_010168.1| hypothetical protein DVU0947 [Desulfovibrio vulgaris str.
Hildenborough]
gi|46448774|gb|AAS95427.1| membrane protein, putative [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233186|gb|ADP86040.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
vulgaris RCH1]
Length = 301
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 89/297 (29%), Gaps = 17/297 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A ++W + + L V + R + +L + +
Sbjct: 9 GYLCALAATVIWSGNFIVARALADTVPPVTTSFLRWVTALVVILPFGLGAVR----RDMP 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L ++ T ++V F A T + + +PV + L + L E +
Sbjct: 65 LLRANLTYFIMAGITGVSVFNTFIYIAGRTTEAINMALIASSSPVWIIILSRILLGEAVT 124
Query: 145 HLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + + L++ G + A S RK S
Sbjct: 125 LRRAAGVAVSLCGTLVLVTRGDFTRLASLRFAVGDLWMLAAALTFASYSVLLRKKPEGIS 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ G + + + ++ + G + L + + +S ++
Sbjct: 185 ALGSLTTTFAIGVVGILPMLAWEWGHGAQLAVTPAVVGAVLYIGIGASLLAYLCWSVAVE 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
R + ++ Y+ PL + +L + I ++V +++ + +
Sbjct: 245 RIGPAKSALVYYSLPLFSATEAALLLGETITLAHVASCALIVGGILIATMQRAPAAK 301
>gi|31795169|ref|NP_858027.1| hypothetical protein pB10p54 [uncultured bacterium]
gi|41056935|ref|NP_957550.1| PecM [Escherichia coli]
gi|51492605|ref|YP_067902.1| hypothetical protein pFBAOT6.93 [Aeromonas punctata]
gi|53793907|ref|YP_112360.1| PecM-like protein [uncultured bacterium]
gi|60115517|ref|YP_209308.1| hypothetical protein SC003 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|160431641|ref|YP_001551808.1| PecM protein [Salmonella enterica subsp. enterica serovar Dublin]
gi|161867925|ref|YP_001598106.1| PecM [Salmonella enterica subsp. enterica serovar Choleraesuis]
gi|168239513|ref|ZP_02664571.1| drug/metabolite transporter [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168259558|ref|ZP_02681531.1| drug/metabolite transporter [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|169797547|ref|YP_001715340.1| hypothetical protein ABAYE3596 [Acinetobacter baumannii AYE]
gi|170650899|ref|YP_001740034.1| drug/metabolite transporter [Escherichia coli SMS-3-5]
gi|170783421|ref|YP_001746864.1| PecM protein [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|189009831|ref|YP_001911159.1| PecM [Salmonella enterica subsp. enterica serovar Dublin]
gi|194439946|ref|ZP_03072007.1| drug/metabolite transporter [Escherichia coli 101-1]
gi|194733776|ref|YP_002112911.1| drug/metabolite transporter [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|213155640|ref|YP_002317685.1| regulator protein PecM [Acinetobacter baumannii AB0057]
gi|221218572|ref|YP_002527530.1| hypothetical protein pO103_74 [Escherichia coli]
gi|256367699|ref|YP_003108190.1| PecM [Escherichia coli]
gi|256367776|ref|YP_003108333.1| protein pecM [Escherichia coli]
gi|301028307|ref|ZP_07191565.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
196-1]
gi|301307344|ref|ZP_07213352.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
124-1]
gi|301594934|ref|ZP_07239942.1| protein pecM [Acinetobacter baumannii AB059]
gi|310286453|ref|YP_003937714.1| protein pecM [Escherichia coli]
gi|313116782|ref|YP_004032932.1| transporter permease protein [Edwardsiella tarda]
gi|331680945|ref|ZP_08381585.1| membrane protein, drug/metabolite transporter (DMT) family
[Escherichia coli H299]
gi|31746413|emb|CAD97541.1| hypothetical transmembrane protein [uncultured bacterium]
gi|38606072|gb|AAR25036.1| PecM [Escherichia coli]
gi|45758075|gb|AAS76287.1| hypothetical transmembrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|46019646|emb|CAG25424.1| hypothetical transmembrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|51470648|emb|CAG15141.1| conserved hypothetical integral membrane protein [Aeromonas caviae]
gi|53136943|emb|CAG30851.1| PecM-like protein [uncultured bacterium]
gi|85815549|emb|CAI47019.1| putative membrane protein [Bordetella bronchiseptica]
gi|90265385|emb|CAJ77067.1| Regulatory protein [Acinetobacter baumannii]
gi|103055939|gb|ABF71537.1| PecM [Escherichia coli]
gi|154200132|gb|ABS71071.1| PecM [Salmonella enterica subsp. enterica serovar Dublin]
gi|154757951|emb|CAO00286.1| PecM protein [Salmonella enterica subsp. enterica serovar
Brandenburg]
gi|159885510|dbj|BAF93113.1| PecM protein [Salmonella enterica subsp. enterica serovar Dublin]
gi|161087304|gb|ABX56774.1| PecM [Salmonella enterica subsp. enterica serovar Choleraesuis]
gi|169150474|emb|CAM88374.1| conserved hypothetical protein; putative membrane protein
(PecM-like) [Acinetobacter baumannii AYE]
gi|170522175|gb|ACB20352.1| drug/metabolite transporter [Escherichia coli SMS-3-5]
gi|194421141|gb|EDX37167.1| drug/metabolite transporter [Escherichia coli 101-1]
gi|194709278|gb|ACF88501.1| drug/metabolite transporter [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197287814|gb|EDY27204.1| drug/metabolite transporter [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205350894|gb|EDZ37525.1| drug/metabolite transporter [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|213054800|gb|ACJ39702.1| regulator protein PecM [Acinetobacter baumannii AB0057]
gi|215252900|gb|ACJ63559.1| conserved hypothetical protein [Escherichia coli]
gi|225121189|gb|ACN81012.1| PecM [Acinetobacter baumannii]
gi|227430088|emb|CAX51336.1| PecM protein [Salmonella enterica subsp. enterica]
gi|228480636|gb|ACQ41964.1| PecM [Escherichia coli]
gi|228480713|gb|ACQ42040.1| protein pecM [Escherichia coli]
gi|285016595|gb|ADC33144.1| PecM-like protein [Escherichia coli]
gi|293628094|gb|ADE58497.1| PecM [Escherichia coli]
gi|299800916|gb|ADJ51178.1| putative drug/metabolite transporter [Klebsiella pneumoniae]
gi|299878618|gb|EFI86829.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
196-1]
gi|300837477|gb|EFK65237.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
124-1]
gi|302127784|emb|CBO78198.1| PecM protein [Salmonella enterica subsp. enterica serovar
Enteritidis]
gi|308826782|emb|CBX36044.1| protein pecM [Escherichia coli]
gi|312192419|gb|ADQ43905.1| transporter permease protein [Edwardsiella tarda]
gi|312949068|gb|ADR29894.1| conserved hypothetical membrane protein [Escherichia coli O83:H1
str. NRG 857C]
gi|315252418|gb|EFU32386.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 85-1]
gi|317109933|gb|ADU90871.1| PecM-like protein [uncultured bacterium]
gi|317110017|gb|ADU90954.1| PecM, integral membrane protein [uncultured bacterium]
gi|323937473|gb|EGB33749.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli E1520]
gi|331081933|gb|EGI53091.1| membrane protein, drug/metabolite transporter (DMT) family
[Escherichia coli H299]
Length = 294
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 96/296 (32%), Gaps = 16/296 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +WG T + T Q+L S + V R L + + + +
Sbjct: 8 LLFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALPAGLLLVMIV----------RQIP 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + A +++ W ++ G + + V P++ VF+ + L +
Sbjct: 58 TGIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLMVVFISAALLGSPIRL 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-----SAYCFARKTIPVGSSEGFFIEM 200
+ ++ A+ + ++ L L + +A A+
Sbjct: 118 MAVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGTVLTRKWQPPVPLLTFTA 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LA L V + + ++ GI R + + V
Sbjct: 178 WQLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAGLTYFLWFRGISRLEPTVVS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++ + +P ++ L Q + ++ I +V+ ++ + + +KS
Sbjct: 238 LLGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWLGQRSNRTPRARIACRKS 293
>gi|317125090|ref|YP_004099202.1| hypothetical protein Intca_1964 [Intrasporangium calvum DSM 43043]
gi|315589178|gb|ADU48475.1| protein of unknown function DUF6 transmembrane [Intrasporangium
calvum DSM 43043]
Length = 299
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 86/289 (29%), Gaps = 11/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + T + +WG T + +E V ++ ++ R + + L
Sbjct: 6 RSRLATFLLIALTAVWGSTFFLIRDLVEHVPPVDFLAVRFGIAAVIMVVVFWRPLRALR- 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +G+ + + L T ++ F V++ + +V L+
Sbjct: 65 -------RRELGIGTVLGLLYGLAQILQTQGLATTPASVSGFITGTYVVLTPLITAVVLR 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ A L L +++L + AI + +A S
Sbjct: 118 ERVSGTTWAAVSLATAGLALLSLRGFSVGVGEAITLLAAALYALHIVGLGRHSSHEIATG 177
Query: 201 CVL--AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + GG L + + ++ +
Sbjct: 178 LSVVQMVVIAVLCTVGAVPGGIVLPATAGQWASVLYMVVFASILALWMQTWAQAHLPATR 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I+ P+ +V++ + + + G+V+ AM L +
Sbjct: 238 AAIIMTMEPVFAAFFAVWLGGESLTGRMLLGGGLVLAAMFAVELLARRH 286
>gi|313679757|ref|YP_004057496.1| hypothetical protein Ocepr_0866 [Oceanithermus profundus DSM 14977]
gi|313152472|gb|ADR36323.1| protein of unknown function DUF6 transmembrane [Oceanithermus
profundus DSM 14977]
Length = 293
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 81/289 (28%), Gaps = 13/289 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ +LW + LE + R L + + +
Sbjct: 8 ALAFTLVLWASAFAGIRAGLEGYGPAHLALLRFLVASSTLVVYAALARVRPP------RR 61
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + + V+ Y LT S P+ + L FL ERL L
Sbjct: 62 ADLGRIALLGFLGITVYHVALNYGELTVSAGAASLLIASGPIFTALLAVFFLGERLTPLG 121
Query: 148 IIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L + ++ L + +A ++ F + G +
Sbjct: 122 WAGIGLGFAGVALIALGEGGGLRFSPGAFWIVLAAFSTSLYFVFQKPLHGRYTPLEVTAY 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L L+ + E + + + +++ + RA S V
Sbjct: 182 TLWAGTLWMLPLLPGLPAELAAAPPAATWSVVYLGVGPGALAYVAWTFALSRAPASRVTS 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y +P L IV + L + + + + ++ ++V + +
Sbjct: 242 FLYLSPALAIVIAWVWLGEWPSLLAVVGGAVAIVGVLVTQYAGRAPASR 290
>gi|311271652|ref|XP_001928797.2| PREDICTED: transmembrane protein 20 [Sus scrofa]
Length = 366
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 96/300 (32%), Gaps = 22/300 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ + L+ + L+ + ++ + +E+ + R ++ + + ++Y
Sbjct: 71 LGMFYMLLSAFLFSVAALFVKKVQDIHAVEISAFRCVFQMLIIIPCLIYRK------TGF 124
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ L+ + +V YA + + F PV + +FLKER +
Sbjct: 125 IGPKDQRIFLILRGVLGSVSMILIYYAYQSTSLADATVITFSCPVFTSIFACIFLKERYS 184
Query: 145 HLQIIAALLIILSLLIMTLHSGIP----------------LLSLAIAVTWSAYCFARKTI 188
+ + + ++++ + A+A T A
Sbjct: 185 LWDAVFTVFTLTGVILIVRPPFLFGSSVEETDRDYSVHLKGTFAALAHTVFAAVTLVVLR 244
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+G S + + + + L V F GE D LFL+ G+ +
Sbjct: 245 KMGKSVDYILSIWYYVVVGLMECVTVLFILGEWSLPRCGLDRLFLVLIGIFGLGGQVFLT 304
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ K V +M+ + + + + V+ + + S
Sbjct: 305 KAIQIEKAGLVALMKTLEVVFAFIFQITFFNKVPSWWTVGGSLCVIASSTGAAIRKWYQS 364
>gi|257461264|ref|ZP_05626361.1| transporter [Campylobacter gracilis RM3268]
gi|257441292|gb|EEV16438.1| transporter [Campylobacter gracilis RM3268]
Length = 299
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/298 (9%), Positives = 87/298 (29%), Gaps = 11/298 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S G +LWG + + Q+L + VS ++ +R+ + + V S
Sbjct: 3 SQNEFFGVFITLLGGVLWGFSSVCGQYLFTQKGVSADWLVPYRLSLAGLAMVAYYVARSP 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+ + +L+++ L + + + + + + P + + +
Sbjct: 63 RLAFAPLKDRVL-LPQLLIYAFFGLMMTQYSYFCGVELSNAAVATAIQYSAPALILAVVC 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIP 189
+ +++IA + +L ++++ H L + ++
Sbjct: 122 FLERRVPKKVELIALIFAVLGVVLLATHGDLGSLVISAEALVWCLISALGVVIYSLIPTK 181
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + + + L +
Sbjct: 182 LNQKYPVPLNLGWGMVIGGGALALYTRVWQLGGVSDADGFAVLVAVVILGTICASSFYMT 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G+K S ++ P+ + F L + F +++ + +
Sbjct: 242 GLKIIGASRASMIACIEPVSAAAFAYFWLGTEFVFLDFAGFTLIISCIFLLAKDRKKA 299
>gi|221200643|ref|ZP_03573684.1| RarD protein [Burkholderia multivorans CGD2M]
gi|221208472|ref|ZP_03581474.1| RarD protein [Burkholderia multivorans CGD2]
gi|221171660|gb|EEE04105.1| RarD protein [Burkholderia multivorans CGD2]
gi|221179215|gb|EEE11621.1| RarD protein [Burkholderia multivorans CGD2M]
Length = 299
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 53/293 (18%), Positives = 115/293 (39%), Gaps = 6/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---L 81
G + A L+ + Y ++L ++ L++ + RVLW+ PG I +L L
Sbjct: 9 RGVMLSVAASTLFALMSAYAKWLVPLTGLDIFAWRVLWTAPGALALIALRGRWPALAELL 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++++ + + L +A +L + F++A L + S YF+ P+ V +G + E
Sbjct: 69 ARSVRDWRLLVALPVTAALLGLQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L + + + F + S F
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAVEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + + G + + L G G+L++ + + ++ GI
Sbjct: 189 VLL---CPIAIAMVATSGTPVAPHPLLWSTLLPGLGVLSTLALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++ S+ +L + + + +G + +A+ + + + + +
Sbjct: 246 LGYVEPVLLVAVSLLLLGETLTVAKLATYGPIWVAVALTAWHSAMLMRRLPAR 298
>gi|210634491|ref|ZP_03298118.1| hypothetical protein COLSTE_02040 [Collinsella stercoris DSM 13279]
gi|210158792|gb|EEA89763.1| hypothetical protein COLSTE_02040 [Collinsella stercoris DSM 13279]
Length = 306
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 80/284 (28%), Gaps = 12/284 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G LWG + +L + L V+S R++ +F + G
Sbjct: 18 NLRGVACALAGGALWGFSGTAVSYLFRSSGIDPLWVMSVRMVL-AGALFLLLALVRGDRR 76
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +L+F+ L ++ ++ A+ + + + + V
Sbjct: 77 PFELMRDKSAVRDLLLFAGAGLFLNQFSYLMAIQATNSATATVLQSLQLLPVAVVACVIG 136
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---- 195
+ +I +L + ++T ++L A A + G
Sbjct: 137 RRAPKRREIAGMVLALAGTFLITTGGDPSQMALPPAGLLFGLLAALGGAGLAVFPGRILA 196
Query: 196 ----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + L + G +F L + + G+
Sbjct: 197 KYGVTAVNGWAMLLVGLIAAPFVPDWGQAVASFDISCWVVFGALVVLGTWCSYLFYMQGV 256
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
++ P+ V S + + F +++I
Sbjct: 257 HEIGSLKTAMLSTVEPISATVLSALWIGVVFSPTDLLGFAMIII 300
>gi|126734704|ref|ZP_01750450.1| hypothetical protein RCCS2_12544 [Roseobacter sp. CCS2]
gi|126715259|gb|EBA12124.1| hypothetical protein RCCS2_12544 [Roseobacter sp. CCS2]
Length = 287
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 92/288 (31%), Gaps = 5/288 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L + C ++ + ++ L + +V+ ++ R + V SG
Sbjct: 1 MQNNPRLGILLMICTTFVFAVQDGISRHLAENYNVIMIVMIRYWFFAAFVITIATRQSGS 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ T + + T+LA+ + A + + + P++ L
Sbjct: 61 IRAAAATK----QPILQITRGTLLALEICVMVSAFVLLGLVESHAIFACYPLLIAALSGP 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ + +A + + +L++ A+ SA+ FA + +
Sbjct: 117 VLGEKVGWRRWVAIGIGFIGVLVILQPGYAVFAPAAVIPLASAFMFALYGLLTRYAARKD 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V +G + D ++ + + + + A+ S
Sbjct: 177 TTATSFFWTGTSGAVVMTIAGVWFWEPMTATDWQWMAALCITGAGGHWLLIKTYEVAEAS 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
V Y + + +L + + I IVV A + L +
Sbjct: 237 EVQPFAYLQLVFASAIGLLLLDETLRPNVAIGAAIVVGAGIFTLWRSR 284
>gi|51244142|ref|YP_064026.1| hypothetical protein DP0290 [Desulfotalea psychrophila LSv54]
gi|50875179|emb|CAG35019.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 308
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 89/284 (31%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F A I+W + + + + VI R+L + Y G K
Sbjct: 12 VIAIFVAMIIWASSFIALKIAFRSYHPMVVIFGRMLIATLCFMVFYKYVFKGFKYHKGDY 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K +L + +++ F AL P+ + S+FLKE+ N
Sbjct: 72 K-----PLLFMAFCEPCLYFIFEAIALKNTSASQAGVITATAPIFILAAASLFLKEKYNL 126
Query: 146 LQIIAALLIILSLLIMTLHSGIP----------LLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ AL + + +TL S + + Y K++ S
Sbjct: 127 QSWLGALAALAGVCWITLASATSESAPNPIFGNFCEVLAMACATGYTVCLKSLTKRYSPL 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F L + + +P + +++ + +++Y +
Sbjct: 187 FLTSTQALMGTFFYLPMLFLPFVEMPTEYVALPSFAIIYLGAVVSLIAYGLYNYALAHMP 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ + + L + ++ + +++ ++ V
Sbjct: 247 AAQGASYINLIPIFSVAMAWLFLGETLNLSQGFAAALIIASVWV 290
Score = 35.7 bits (80), Expect = 9.2, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 43/132 (32%), Gaps = 1/132 (0%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+A+ A F I S + + I L ++V+ + +
Sbjct: 16 FVAMIIWASSFIALKIAFRSYHPMVVIFGRMLIATLCFMVFYKYVFKGFKYH-KGDYKPL 74
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
L F + +K S G++ TAP+ ++ ++ LK+ + +
Sbjct: 75 LFMAFCEPCLYFIFEAIALKNTSASQAGVITATAPIFILAAASLFLKEKYNLQSWLGALA 134
Query: 293 VVIAMVVYLLPT 304
+ + L +
Sbjct: 135 ALAGVCWITLAS 146
>gi|313672209|ref|YP_004050320.1| hypothetical protein Calni_0244 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938965|gb|ADR18157.1| protein of unknown function DUF6 transmembrane [Calditerrivibrio
nitroreducens DSM 19672]
Length = 295
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 94/290 (32%), Gaps = 15/290 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WG T + + +E + + + R + + + +Y L
Sbjct: 12 LLLLFTALIWGSTFIIVKKSIESIPPVAFNTIRFMIASLLLMIIFLYRPKKL-------- 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +L + + L T F + + + VFL ++++
Sbjct: 64 DKQVLMDGSVLGLVLFMTFTCQTIGLKFVTASETGFITGLYLIFVPIISVVFLGKKIDVN 123
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
IIA ++ + L +++ G + + + A+ + F +
Sbjct: 124 TIIAVMISFIGLSLISFTGKVNVGFGEFLVLLNALFVAFHILLVDYYGRRDDVFALTSIQ 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG--YGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + ++ G F + D + F I +Y K +
Sbjct: 184 IFVLTILSFIYTTIFEGWSFKIVINVDIVVAFLITGVFATVVAFMIQTYAQKYTTPTKAA 243
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ PL V + + + + ++ I+M++ L K
Sbjct: 244 VIFTFEPLSSAVFGYLLGGELLKLSQYFGAFLIFISMLIIELKGKERIDK 293
>gi|28211177|ref|NP_782121.1| transporter [Clostridium tetani E88]
gi|28203617|gb|AAO36058.1| transporter [Clostridium tetani E88]
Length = 315
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 86/297 (28%), Gaps = 18/297 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQV--SVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + V A +LWG + T+ L V R + F
Sbjct: 3 KNDKTKGFILVILAALLWGYLGIPTKNLYDFNFDSFSVCFFRTSIAGIFYFLYCFKKDAN 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + +++ A A + + ++ L + F + V V L
Sbjct: 63 LLKID----KKGLLFFILYGAIGFATTFICYNVSVNYTSIALGTMFMFTSQVWVVILSYF 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMT-----------LHSGIPLLSLAIAVTWSAYCFARK 186
KE+ +IIA L + +M L I L I
Sbjct: 119 IFKEKFTSKKIIAIFLTLAGCFMMCKMHDPKNLNLNLKGVILGLISGITFALQIIFAKIS 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL-FLIGYGLLNSFVFC 245
+ + ++ + ++ P +
Sbjct: 179 SKKYSQNTLLAYSFIFASLFLIPFMDAKNTLNILSDTNNLYPIIQNIFVIGFFTTVIANG 238
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ ++ ++ I+ + + + F+ Q +D ++ I +++I++++ L
Sbjct: 239 AYLKSVEHIEVGIASIIATLEIPISAIIAYFVFHQTLDIIQIIGMFLIIISVIILEL 295
>gi|163793507|ref|ZP_02187482.1| hypothetical protein BAL199_03329 [alpha proteobacterium BAL199]
gi|159181309|gb|EDP65824.1| hypothetical protein BAL199_03329 [alpha proteobacterium BAL199]
Length = 295
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 88/289 (30%), Gaps = 7/289 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + A + + ++ + V +++ R + + G + +
Sbjct: 13 RGIILILIANLGFAGMDAVSKTLIVDYPVAQILWVRYAFFAAFATALSLRSGGPFAGFRS 72
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ V A IL F+ A T V P+I L ++ L E +
Sbjct: 73 Q-----RPALNVLRAVILLAEIACFVVAFRYLPLAETHSIAAVYPLIITALSALVLGEFV 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A + + ++++ A+ A FA I + +L
Sbjct: 128 GPRRWAAVAVGFVGVVVILRPGLGVFNPAALIPLAGAALFAVYQIMTKVVARRDSMVTIL 187
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+G ++ ++ + L G + + ++ A S +
Sbjct: 188 LYTGWIGFALTSITGPFYWTPPDLKGWILLPIAGFMGVVGHLLLIKALELAPASVLQPFN 247
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
YT + + DTV + G +V+A +Y K +
Sbjct: 248 YTLLIWATAVGFLVFGDLPDTVTVLGAG-IVVASGLYTWWRERVRAKRR 295
>gi|262280269|ref|ZP_06058053.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258047|gb|EEY76781.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 300
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 88/290 (30%), Gaps = 1/290 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASVFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + F +
Sbjct: 69 PLKWKDVPALGVLGFFSVTLHHLLINTGQQYVSAVASSILSQSIPLFTFIVSAFFFKEKI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A A F + +
Sbjct: 129 RFKQWLCILLGLCGAVLVVSGDHGLGVPSPYSLLIVLAAIAWAIYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ + + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTIPLLFYSAQLSAEILHATWQANMSIVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVVFLSEKPSMIVLLGGVIIVGSLVWMNWGNRRT 298
>gi|229165520|ref|ZP_04293300.1| Transporter, drug/metabolite exporter [Bacillus cereus AH621]
gi|228617968|gb|EEK75013.1| Transporter, drug/metabolite exporter [Bacillus cereus AH621]
Length = 308
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS L+ ++ R+L + + ++
Sbjct: 1 MNKSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSLDFLTIRLLLAGIFILSFLLIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +QI+A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKFPASMQILAIITALTGTYFIITNGSIENIVLSKAAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I + + F + + LI + + F +
Sbjct: 179 SLIKECGTTVVIGWGMSIGGIALLICNRSFGWSQISQTFTLQTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|229182911|ref|ZP_04310144.1| Transporter, drug/metabolite exporter [Bacillus cereus BGSC 6E1]
gi|228600535|gb|EEK58122.1| Transporter, drug/metabolite exporter [Bacillus cereus BGSC 6E1]
Length = 310
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFEQRKFPAPMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|297198185|ref|ZP_06915582.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|197714670|gb|EDY58704.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length = 340
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/292 (7%), Positives = 73/292 (25%), Gaps = 29/292 (9%)
Query: 29 FVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +G + + + L + L V+ RV + + V L
Sbjct: 27 LALVSALAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVMLPLAVRHRALLRSRPAL-- 84
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ F +A F+ ++ + ++ P + + + +
Sbjct: 85 ------LAGFGLLGVAGVQAFYFASISRIPVGVALLVEYLAPALVLGWVRFVQRRPVTRA 138
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI-------- 198
+ +L + L + + + V S +G
Sbjct: 139 AALGVVLAVGGLACVVEVWSGLSFDALGLLLALGAACCQVGYFVLSDQGSESGDQAPDPL 198
Query: 199 -----------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + L + +
Sbjct: 199 GVIAYGLLVGTVVLTAVARPWTMDFSVLAQRADMNGTPVAAGLLLGWIVLIATVLAYVTG 258
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R + G++ ++ V + +L + + + + +V++ +
Sbjct: 259 VVSVRRLSPAIAGVVACLEAVVATVLAWVLLGEHLSAPQIVGGAVVLLGAFI 310
>gi|184159100|ref|YP_001847439.1| permease [Acinetobacter baumannii ACICU]
gi|239501082|ref|ZP_04660392.1| hypothetical protein AbauAB_02107 [Acinetobacter baumannii AB900]
gi|332875929|ref|ZP_08443715.1| protein RarD [Acinetobacter baumannii 6014059]
gi|183210694|gb|ACC58092.1| predicted permease [Acinetobacter baumannii ACICU]
gi|322509014|gb|ADX04468.1| permease [Acinetobacter baumannii 1656-2]
gi|323518996|gb|ADX93377.1| permease [Acinetobacter baumannii TCDC-AB0715]
gi|332735795|gb|EGJ66836.1| protein RarD [Acinetobacter baumannii 6014059]
Length = 314
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 56/294 (19%), Positives = 122/294 (41%), Gaps = 5/294 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSL 80
+ G + A + +G+ YTQ L Q+ + R++ +LP + + + S ++
Sbjct: 2 LKGVILSVMASLTFGVLYFYTQLLGQLDSEQTFGWRIIATLPFLTLFMWWSGDLSHIKNI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV
Sbjct: 62 YQRILAKPSLLLLLITTSVLTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q +A +L I+ + G A+ + F + + G F
Sbjct: 122 EKISKFQWVAIVLAIIGVGHEIFRLGSIAWETALVAIGYSAYFLLRKKIKTDNLGGFWWD 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +P Y+ G FL L + G G+L++ + + L G
Sbjct: 182 LLIIMPVAIYLTHTGLL-PYSKFLDQPTLGLVIAGLGVLSAIGLGCYILASRYLPLVVFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P+L+ ++ +L + I + + A+ V +L + + + K
Sbjct: 241 LLGYLEPVLLALA-SLVLGESIGKEEWFTYLPIWCAVFVLVLEGAFHLYQQQQK 293
>gi|153828088|ref|ZP_01980755.1| putative membrane protein [Vibrio cholerae 623-39]
gi|148876497|gb|EDL74632.1| putative membrane protein [Vibrio cholerae 623-39]
Length = 341
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 45 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 100
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 101 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 160
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 161 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 220
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 221 WTLIYLQGVCAVFMLTPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 280
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 281 STAMFMNLLPVFSVSLAATLLGEKVYPYHLIGGLLVISGVALSQLKIQRRN 331
>gi|39997771|ref|NP_953722.1| hypothetical protein GSU2677 [Geobacter sulfurreducens PCA]
gi|39984663|gb|AAR36049.1| membrane protein, putative [Geobacter sulfurreducens PCA]
Length = 302
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 83/267 (31%), Gaps = 11/267 (4%)
Query: 37 WGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+G ++ + F S V+ R L + + + + ++
Sbjct: 36 FGALGIFGKVAFASGASTAVVLFLRFLVAGVLMAALMPVLRLSWP------RGRDLWILV 89
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
A + +L LT+ ++ P + + ++RL L++ A
Sbjct: 90 GMGAIGYVGQAFCYFTSLRYASAGLTALLLYLYPALVTLASAALGRQRLTPLKVAAVAAS 149
Query: 155 ILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
++ +L+ L + ++ + V G V+ + A
Sbjct: 150 LIGILLTVADGLTGSLSGIAFGAGAAVIYTGYILVGEQVSRRTGAIPAATVIMLAAATVY 209
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
G H+ G + F G++R + + P++ +
Sbjct: 210 GCAVIWQGPHWPTGLAGWGAVVGIALFSTVVAMVGFFAGMQRLGAADAATLSTLEPVVTL 269
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMV 298
V + IL + + V+ +V+ A+V
Sbjct: 270 VLAALILGESLGGVQLAGAALVLGAVV 296
>gi|126173626|ref|YP_001049775.1| hypothetical protein Sbal_1388 [Shewanella baltica OS155]
gi|125996831|gb|ABN60906.1| protein of unknown function DUF6, transmembrane [Shewanella baltica
OS155]
Length = 283
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 111/292 (38%), Gaps = 10/292 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M L + A +L L + LE V +++ +R L++ V + G L L
Sbjct: 1 MQPLLMILAAQLLIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + F+ A+L + + +P++ + L ++FL ER
Sbjct: 61 YYKVHLARALL-------IGLGNAIFMLAILHLPLATVTAVIYTSPLLLLVLSALFLHER 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +A ++ +L+++ + A A ++ + + +
Sbjct: 114 IGYRRSVAGIIGFTGILLISQP--TEFNLYIGLAFFGAMTSALNSLILKAYSTHEHPFSM 171
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L F +++ + ++P + GL + + + +RA S + +
Sbjct: 172 LFWSNAFAMIFLIPATLYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPV 231
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
EYT + + +IL + + V I G+V+ + ++ + K++
Sbjct: 232 EYTGLIFAALFGWWILDEELSLVMLIGIGLVIFSSILPSYSELKAKWKSRRS 283
>gi|308234881|ref|ZP_07665618.1| hypothetical protein GvagA14_01438 [Gardnerella vaginalis ATCC
14018]
Length = 290
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 100/297 (33%), Gaps = 13/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + + +WG + + L + +++++ R + + S
Sbjct: 1 MRRKLAIIGLTVVTAIWGGGFVASDIALGSFAPMQIMTIRFAIAALVMLVI--------S 52
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T+ N K + V L + + L +F + VI FL
Sbjct: 53 AKQFTVINYKEILAGVGMGVALFAGFSLQTFGLQYTTPSKNAFITSLNVVIVPFLSMFLF 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSEG 195
K+R+ +I+ A+L +L + I++L + + + A I V
Sbjct: 113 KKRVGLKEIVGAILSVLGVAILSLSNNFTISFGDLLTLLCALGFASQIVLTGIFVKVYRP 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L V F+G H+ + + + + + + K
Sbjct: 173 NVLNCIQMCTAFLLSFVVMQFTGECHWIASPNGWISVIYLGFISTTVCYLLQTACQKYVN 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ I+ + + S+ +L + + I I++ A+++ LP+ K
Sbjct: 233 ETQSAIVLSLEAVFGTLFSIILLNEIVTIRMIIGSAIILCAVLISSLPSSFIRRSTK 289
>gi|167753217|ref|ZP_02425344.1| hypothetical protein ALIPUT_01488 [Alistipes putredinis DSM 17216]
gi|167659148|gb|EDS03278.1| hypothetical protein ALIPUT_01488 [Alistipes putredinis DSM 17216]
Length = 314
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 91/310 (29%), Gaps = 21/310 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G +F A +WG+ +F+ V+ L V R++ ++ + +
Sbjct: 1 MQTINWKGHGAMFGANAIWGLMSPVAKFVMLGGIVTPLAVTDLRIVGAMILFWILSFFRK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + S + ++ G FI + S P+ ++ L
Sbjct: 61 ------SEHVPPKDLAKLFGASLLGVVLNQGSFILGVGMTSPVNASIITTSMPLWAMILA 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFAR 185
++FLKE + +++ L++ L SG + A A F
Sbjct: 115 AIFLKEPITAKKVLGIAAGASGALLLVLGSGNTDSAGGHSVAGDLLVLFAQLSYALYFVL 174
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNG--FSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
V I + L + + G + L
Sbjct: 175 YKNFVTRYSLTTIMKWMFTFATLCILPFTGRDLLSTDWQALSAAAIGSLAFIVVGSTFLS 234
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + G K + + G+ Y PL+ + +V + D + ++ + +
Sbjct: 235 YMLIIVGQKNLRPTVAGMYNYIQPLVATLVAVCWGMETFDPTKICSVLLIFSGVYLVTTS 294
Query: 304 TVINSGKNKT 313
+
Sbjct: 295 RSRADAEKSR 304
>gi|118588316|ref|ZP_01545725.1| hypothetical protein SIAM614_23582 [Stappia aggregata IAM 12614]
gi|118439022|gb|EAV45654.1| hypothetical protein SIAM614_23582 [Stappia aggregata IAM 12614]
Length = 291
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/282 (9%), Positives = 78/282 (27%), Gaps = 6/282 (2%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + + ++ ++ RV + + + + L + +G
Sbjct: 6 GAIWGGSFLFAKVAVAEIPPFVLVFLRVSIACAVLLIILWHRGMLNRLERQHALPFLVMG 65
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L + + G + F V S+ L+ ++
Sbjct: 66 LLNNAVPFSLLFLGQTAIGAGLASILNATTPVFTVVVASLLTKQETLQGNRIAGVVLGVA 125
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM-----CVLAIPA 207
+ + L L + +A +A + ++ + +
Sbjct: 126 GVAIMLWSSLSGLASDPLWAQLCCLGAAISYACAATFARRFKSLPPQVSATGQLIGSSTL 185
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ V L L + + I+ + A + ++ P
Sbjct: 186 MLPVALLTAGNWSIADPSLTAWFNVLALGVLATALAYLIYFQILAEAGATNASLVTLLVP 245
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ IL + + + F +++ +VV +
Sbjct: 246 ASALFFGWLILGENLGVTQLGGFAVLLAGLVVLDGRILKRRR 287
>gi|118396571|ref|XP_001030624.1| Integral membrane protein DUF6 containing protein [Tetrahymena
thermophila]
gi|89284934|gb|EAR82961.1| Integral membrane protein DUF6 containing protein [Tetrahymena
thermophila SB210]
Length = 677
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 73/234 (31%)
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
F I + + KN + ++V + + + P
Sbjct: 444 FIINFTFCYFQKIPVYPKNITELKLMVSRGLLGGITAIIMFQSFKYLNISDAVVFGNTNP 503
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + FL ++FL E+L +I + + L +L++ +L K
Sbjct: 504 IWTSFLAAIFLGEKLTIKSLIFSFISFLGMLLIIKPDFFFEATLDKEPINMQGRNQVKGC 563
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + + + + L N+ + +F+
Sbjct: 564 MFALFGSILLSFIQIILSKVQKQMKCNNAQLLMYNHFFGCIITGITELQLPNNDIILLFT 623
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
K S + ++Y +L + +F + I + ++++ + +L
Sbjct: 624 RSFTLEKASIISPLQYIGVVLSFLVDIFFFNEQIYLTSVLGAVLIIVGSIAIIL 677
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 2/134 (1%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ +A W Y + + + + NI
Sbjct: 405 YMRKNVAEKWLQYMHQQAKFSLYQILHVLDSQGRDIPHRFIINFTFCYFQKIPVYPKNIT 464
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ ++ GLL I K +S + T P+ + L + + I
Sbjct: 465 ELKLMVSRGLLGGITAIIMFQSFKYLNISDAVVFGNTNPIWTSFLAAIFLGEKLTIKSLI 524
Query: 289 VFGIV-VIAMVVYL 301
F + + M++ +
Sbjct: 525 -FSFISFLGMLLII 537
>gi|15888329|ref|NP_354010.1| permease [Agrobacterium tumefaciens str. C58]
gi|15155999|gb|AAK86795.1| permease [Agrobacterium tumefaciens str. C58]
Length = 311
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/306 (11%), Positives = 94/306 (30%), Gaps = 15/306 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + + + + V ++ R +++ + + + S
Sbjct: 6 MSPFRGISLKLISVGFFLVMQTCIKAAGDVPAGQITFFRSAFAILPIVVYLAWLHALASA 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + + + + Y L + +P+++V + L+
Sbjct: 66 L-----HTNNLLGHFKRGFLGILSMVCGFYGLTMLPLPEFIAIGYASPLLAVVFAAFILR 120
Query: 141 ERLNHLQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARKTIPVG 191
E++ + A + ++ +L++ AIAV A I V
Sbjct: 121 EKVRIYRWSAVFVGMMGVLVILWPKMTLLREGGFAAGEGLGAIAVLCGAALGGLAMIQVR 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ +L + + S + + + LI G+ + +
Sbjct: 181 QLVETEKTPTIVLYFSLTATLLSLISVPLGWSALTMTQAMLLITSGICGGVAQILLTESY 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI-VVIAMVVYLLPTVINSGK 310
+ A++S + EY++ + I S + I I ++ + + + +
Sbjct: 241 RHAEVSVIAPFEYSSIVFGIAVSYILFGDIPTITMLIGTAIVILAGIFIIFREHQLGLAR 300
Query: 311 NKTKKS 316
+K+
Sbjct: 301 RAARKA 306
>gi|120603081|ref|YP_967481.1| hypothetical protein Dvul_2038 [Desulfovibrio vulgaris DP4]
gi|120563310|gb|ABM29054.1| protein of unknown function DUF6, transmembrane [Desulfovibrio
vulgaris DP4]
Length = 301
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 89/297 (29%), Gaps = 17/297 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A ++W + + L V + R + +L + +
Sbjct: 9 GYLCALAATVIWSGNFIVARALADTVPPVTTSFLRWVTALVVILPFGLGAVR----RDMP 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L ++ T ++V F A T + + +PV + L + L E +
Sbjct: 65 LLRANLTYFIMAGITGVSVFNTFIYIAGRTTEAINMALIASSSPVWIIILSRILLGEAVT 124
Query: 145 HLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + + L++ G + A S RK S
Sbjct: 125 LRRAAGVAVSLCGTLVLVTRGDFTRLASLRFAVGDLWMLAAALTFASYSVLLRKKPEGIS 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ G + + + ++ + G + L + + +S ++
Sbjct: 185 ALGSLTTTFAIGVVGILPMLAWEWGHGAQLAVTPAVVGAVLYIGIGASLLAYLCWSVAVE 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
R + ++ Y+ PL + +L + I ++V +++ + +
Sbjct: 245 RLGPAKSALVYYSLPLFSATEAALLLGETITLAHVASCALIVGGILIATMQRAPAAK 301
>gi|229154175|ref|ZP_04282299.1| Transporter, EamA [Bacillus cereus ATCC 4342]
gi|228629311|gb|EEK86014.1| Transporter, EamA [Bacillus cereus ATCC 4342]
Length = 330
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/333 (14%), Positives = 105/333 (31%), Gaps = 24/333 (7%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGT-LFVFCAYILWGITPLYTQFLE---QVSVLEV- 55
M K + K +G + A LWG + + + EV
Sbjct: 1 MNIVRKKDRKGRQQVKTEKIFTHPIGVFIAAIVATFLWGSAFPFIKLSYAELGIQPKEVG 60
Query: 56 -----ISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIY 110
+R S + F ++ K T K ++ + + F
Sbjct: 61 EQILFAGYRFFLSGVMLLFFFKALGKDMNFKKGTGKQ-----LVQIGLFQTFLQYICFYI 115
Query: 111 ALLTRQGFLTSFSYFVTPVISVFLGSV-FLKERLNHLQIIAALLIILSLLI--------M 161
+ G + + + L + + LN ++I + +++ +
Sbjct: 116 GMSYSSGIEGAIISGTSSFFQILLAHFLYKDDALNVRKVIGVSIGFCGVILVNVPSDGSL 175
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ H GI L L A +Y + + ++ + ++ + G
Sbjct: 176 SFHFGIGSLLLLSAAMLYSYGNILAKEGSKTLDIGYMTAYQMIFGSIGLLCIGALQVGVM 235
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
F +I L LI L++ FCI++ +K K+ V + + P+ ++ S IL +
Sbjct: 236 PFTFSIHAILMLIYLSFLSAAGFCIWNTIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEA 295
Query: 282 IDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I + V ++V + + +
Sbjct: 296 IHSFVLFGLACVAAGIIVVNRVPAKQKMEKEKQ 328
>gi|163737108|ref|ZP_02144526.1| hypothetical protein RGBS107_03158 [Phaeobacter gallaeciensis
BS107]
gi|161389712|gb|EDQ14063.1| hypothetical protein RGBS107_03158 [Phaeobacter gallaeciensis
BS107]
Length = 305
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/291 (15%), Positives = 91/291 (31%), Gaps = 5/291 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
G L + A +++ + ++ L + VI R + V G
Sbjct: 18 TQKNNVSAGVLLMIAATVVFAMQDGISRHLAGEYNTFMVIMVRYWFFALFVIALAARAPG 77
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G+ +G+ +F +L +YA + + P++ L
Sbjct: 78 GIRAT----ARTDQLGLQIFRGVLLVAEICVAVYAFTVLGLVESVAVFICYPLLVAALSG 133
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L E++ + A + ++ +LI+ LAI SA FA + +
Sbjct: 134 PVLGEQVGWRRWAAISVGLIGVLIILQPGIGIFDPLAIIPFVSALMFALYGLITRYAARR 193
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +V G ++ + D +++ L + + A+
Sbjct: 194 DSTATSFFWTGVAGMVAMTLVGIWYWEPMSQGDWMWMGILCLTGVTGHWLLIKCYEMAEA 253
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S V Y + V + + I T I I+V A + L +
Sbjct: 254 SAVQPFAYFHLIWAAALGVIVFGEVIRTNVAIGASIIVAAGLFTLWRERVK 304
>gi|149912732|ref|ZP_01901266.1| hypothetical protein RAZWK3B_02050 [Roseobacter sp. AzwK-3b]
gi|149813138|gb|EDM72964.1| hypothetical protein RAZWK3B_02050 [Roseobacter sp. AzwK-3b]
Length = 321
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/316 (12%), Positives = 94/316 (29%), Gaps = 25/316 (7%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIV 72
++ +MG LF A + + + + +FL L +VI R + + I+
Sbjct: 1 MTTSAIQRSNLMGALFALAAVMCFSLNDVGIKFLSDRYALHQVILIRSVIGTLILLAVIM 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+GGL +++ + + L +FV+P+I
Sbjct: 61 PLAGGLRVMRTRRLGAHLLR-----GVCVVFANMCLFLGLAAMPIADAVAVFFVSPLIIT 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+FL+E + + A + + ++++ ++ +A +A I
Sbjct: 116 IFSVIFLRETVGARRWAAIAVGFIGVMVIVKPGTTAFQLASLLPIAAATLYAVMHIVARK 175
Query: 193 SEGFFIEMCVLAIPALFYV-------------------VWNGFSGGEHFFLGNIPDTLFL 233
G + ++ + + D L
Sbjct: 176 IGGTESAATMAFYIQSTFIVASVIFGLTLGHGNFAGSGHPSLEFLLRAWGPIAPEDWPIL 235
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ G+ F S + ++ + EY A + I+ V + I ++
Sbjct: 236 VMLGVSGVFGGFFISQAYRLSEAAFAAPFEYVAMPMAIMWGVTVFGTWPAPTAWIGIALI 295
Query: 294 VIAMVVYLLPTVINSG 309
+ + + +
Sbjct: 296 IGSGLYLIWRESTKGR 311
>gi|116253077|ref|YP_768915.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257725|emb|CAK08823.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 318
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 103/303 (33%), Gaps = 16/303 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+++ MG + +F + + + ++ + + + E+ + R + +++
Sbjct: 10 SSASDVTMGLVLMFISVMFSPLIDIFAKLAIVTIPSAEITAGRFAVQALCMLPIVIWRRS 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + I+ V F+ L +FV P++ LG
Sbjct: 70 F------ADFSWRQNLFHAIRGAIITVSMISFVTTLKYMAVADAIAIFFVEPIMLTILGG 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+FLKE + + A + +++ S + +A+ SA C A +
Sbjct: 124 IFLKETIGWRRYSACGVGFFGAMLIIQPSFEEVGYVALLPVVSALCIAIFVLMTRVLSHR 183
Query: 197 FIEMCVLAIPALFYVVWNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ +++ +++ S + + ++ G G + + +
Sbjct: 184 EDPWAMQFQMSIWGLLFCAILLFLGQGTGSDLFDPVMPDGRAWFYVAGVGAMAAISGILG 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + A ST+ ++Y + + + + D V+ + I++ + +
Sbjct: 244 VYAYRAAPASTLAPLQYFEIVSATIFAWLVFGDFPDAVKWLGIMIIMASGFYIVWRERRF 303
Query: 308 SGK 310
+ K
Sbjct: 304 ASK 306
>gi|300087678|ref|YP_003758200.1| hypothetical protein Dehly_0567 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527411|gb|ADJ25879.1| protein of unknown function DUF6 transmembrane [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 292
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 81/283 (28%), Gaps = 12/283 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
L + I W + + LE +I R L + + V G +
Sbjct: 9 KKALLAIGVTLIFWASSFAGNRAGLESYHPGALILLRFLTASLVLGLYAVITRGIRA--- 65
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ ++ A + + + T SF P+ + L +V LKE
Sbjct: 66 --PRAADLGWIIFGGAIGITAYHSLLAHGQQTVTAGSASFIIGAVPIFTGLLAAVTLKES 123
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA------YCFARKTIPVGSSEGF 196
L Q + + ++ G L A AV A F + +
Sbjct: 124 LTSRQWAGIGVSFAGIALIAFGEGGHLEFEAGAVLILAAAVSTSIFFVIQKKLLRRYRPL 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +++ + P + + + ++Y + R
Sbjct: 184 EVTCYSFWAGTALMLIYLPELLRDLPLAAPGPTAAVIYMGIFPAALAYLTWNYALTRTPA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S Y P++ + + L + + + + + +++
Sbjct: 244 SVATSFMYLNPIVATIIAFIWLGEVPSAIAGVGGLLAIGGVII 286
>gi|293390832|ref|ZP_06635166.1| shikimate 5-dehydrogenase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951366|gb|EFE01485.1| shikimate 5-dehydrogenase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 293
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 62/295 (21%), Positives = 129/295 (43%), Gaps = 8/295 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSL 80
+ G F A +L+G ++ L +S ++ +R++++LP V A+V F ++
Sbjct: 2 LKGIAFSLFASLLFGYMYYFSTLLLPLSGTDIFGYRIVFTLPFVAAAVVLFKQQAALVAH 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK K P VF+ ++ F++A SF Y + P++ V + K
Sbjct: 62 LKRIQKKPHFALAFVFTGALIGFQMWLFLWAPNNGSSLSVSFGYLLLPLVMVAAARLIFK 121
Query: 141 ERLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER++ ++ +A ++ + + + L I + I V ++ Y R+ + + FF+E
Sbjct: 122 ERISRIKFLAVVIAAVGVLSNIVLKGEISWEASVICVGYTTYFVVRRILKMTDLAAFFLE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M L +++ + + N L+ GL++ + ++ +
Sbjct: 182 MLTLLPFCVYFAWQVDIAQVQQ---SNPNILTLLLILGLISGTALNSYILASNHLPMNLL 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G++ Y P LM+ S+ I + ID +F +VIAM++ + V + + T+
Sbjct: 239 GLLGYVEPCLMVGISLLI-GEEIDAQSYPLFICLVIAMLLIIADGVWRTKHSPTR 292
>gi|170289564|ref|YP_001739802.1| hypothetical protein TRQ2_1788 [Thermotoga sp. RQ2]
gi|170177067|gb|ACB10119.1| protein of unknown function DUF6 transmembrane [Thermotoga sp. RQ2]
Length = 293
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 97/294 (32%), Gaps = 13/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++G++ L+T+ L+ V+ L +S R + + ++ + L
Sbjct: 6 LLSGLAYSTIFGLSFLFTKNALDYVTPLTFLSLRFIVAFLSYLLLLITGAVKLG------ 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ F Y L + PV+ L LKE+ +
Sbjct: 60 -KKPYWKLWKLVLFQPVLYFLFETYGLQRVNSSEAGMIIALIPVVVNLLAPFILKEKGDL 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + + L + + + P + +AV A I
Sbjct: 119 LHYLLVGMGFLGVSFIVGFNITPGNIAGKVFMLLAVLSGAMYSVFSRKFSKEFTPTEITF 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A+F+ + + +G L L ++ F + +Y I++
Sbjct: 179 FMMMTGAVFFTLLSLSTGDFRPVFNVHVVIGALYLGVLSSTVAFFLLNYAIRKMSPIFTT 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ +++ V + + T + G+++ ++++ L K
Sbjct: 239 LFSNFTTVVSVIAGVVFRNETVGTQQIAGMGLIISSLIIMSLRRSYKRLSRAQK 292
>gi|121534281|ref|ZP_01666105.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
gi|121307051|gb|EAX47969.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
Length = 316
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/306 (9%), Positives = 86/306 (28%), Gaps = 24/306 (7%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ LWG + + + ++ L ++ R L + ++ L + +
Sbjct: 10 YAALITVSFLWGTSFAAAKIGMYELEPLNLVIFRFLIASAVFGVVLLQTGTYRLLRRQDI 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+V + ++ L + +P+ +V ++ + +
Sbjct: 70 PR-----FIVLGFLAITSYFYIQYTGLRYTTTINAALIVATSPIWTVLFSTMLGWDNITP 124
Query: 146 LQIIAALLIILSLLIMTLHSG------------------IPLLSLAIAVTWSAYCFARKT 187
L + ++ + ++ + ++ V +
Sbjct: 125 LGLAGIVIAFTGVSVIITNGQLINLFNSSTITGDILLLINAVVWAGFTVYGKTILQKYRP 184
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ F + +L + L L L + + + I+
Sbjct: 185 FVAMAYIHIFGTLMLLPFAFVPSPFAPSPLYRHIGDLSWPTVMAALYLALLCSVYAYYIW 244
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G+++ + Y PL I++ ++L + +VV + +
Sbjct: 245 YTGVEKLGAVRTVVFTYLNPLFAIIAGTWLLGEKPTVFTFAGGIMVVTGVYLTNRKPSAT 304
Query: 308 SGKNKT 313
S + KT
Sbjct: 305 STRLKT 310
>gi|313140560|ref|ZP_07802753.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313133070|gb|EFR50687.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 328
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/317 (8%), Positives = 79/317 (24%), Gaps = 26/317 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
M G + ++WG + Q + +S L + R + +++
Sbjct: 1 MKQQEMAGMACLVLTSLIWGFAFVSQVQGMASMSPLFFNATRFTLGAISLIPLLLWKRLR 60
Query: 78 LSL--------------------LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
+ + + + ++ + A +
Sbjct: 61 RCRESGKTVGAGNREAGDDEHDMIAGSALSNPLIVGMICGVFLFAASTLQQYGIMFGCSA 120
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-----LSL 172
F + V+ L + L+ + + +A + + ++ + G L
Sbjct: 121 GRAGFITALYIVMVPLLAYLVLRRAVRMMTWMAVGVAVAGFYLLCITDGFGSLTLADCLL 180
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
A + + A V G +
Sbjct: 181 LFTAVLFAAHILSIDTLGACVDALTLSFIQFVTTAALSWVGTLIEGSMDWNGAGQAWIAV 240
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
L + + + G + + ++ + ++ +L + + + +
Sbjct: 241 LYAGIGSVGVAYTLQAVGQQWVPPTRASLIMSLESVFSVIGGALLLGETMTVRGYLGCAL 300
Query: 293 VVIAMVVYLLPTVINSG 309
+ +V+ +P V
Sbjct: 301 IFAGIVLAQMPGVGRRR 317
>gi|228919437|ref|ZP_04082802.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228840224|gb|EEM85500.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 310
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 101/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 7 KRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 67 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 125 RKFPAPMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + + F + + LI + + F ++
Sbjct: 185 ECGTTVVIGWGMLIGGIVLLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLLYIGS 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 245 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 298
>gi|212635780|ref|YP_002312305.1| hypothetical protein swp_2999 [Shewanella piezotolerans WP3]
gi|212557264|gb|ACJ29718.1| Membrane protein, putative [Shewanella piezotolerans WP3]
Length = 296
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/284 (9%), Positives = 88/284 (30%), Gaps = 11/284 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S ++ L + +L ++ ++ + + +R++ + ++ +
Sbjct: 2 SSQHSLAFMLLAVMSAVLMATIGVFARYAA-LPAEHITFYRLVIGAACMLAFMLLSGKAV 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K +LA F++ A+ ++ P+ S
Sbjct: 61 QVKHKPSKRTIIN------GVMLAGFMVFYVQAISYISMANAVMLIYLAPLTSAAFAHFV 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----AIAVTWSAYCFARKTIPVGSSE 194
KERL + +L +L +M ++ + T + ++ +
Sbjct: 115 YKERLTQINCALIVLALLGFGLMLPNNLDSDNQQQTLGYLYATLAMLSYSGFMLINRKPS 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
L ++ + F + L ++
Sbjct: 175 QSTPYQSTLIQLSVGAICLLPFVLQSPIIPSLNQWGWLIAIGVLPGFLAILFAVKALRVL 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G + Y P+ +++ + F+ + + +++ I +++ A +
Sbjct: 235 PAISFGTLAYFEPVAVVIFAWFLFDETLVSIQLIGALMIIFAGI 278
>gi|170737836|ref|YP_001779096.1| hypothetical protein Bcenmc03_5479 [Burkholderia cenocepacia MC0-3]
gi|169820024|gb|ACA94606.1| protein of unknown function DUF6 transmembrane [Burkholderia
cenocepacia MC0-3]
Length = 310
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 89/290 (30%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P +F +
Sbjct: 2 KTRLIGYLYLAAAMAGVGSTVIASRLAAGGLPPFAATALRFLIATPLLFALMRAQHMCWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ AV +++ +A + I P +S + +V L
Sbjct: 62 RISA----RDAVLLVIQAAAGGVGYTVLLISGTKLSSPLDAGVMLGTLPAMSTLIAAVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
+ER +AA L +L +T G + SL AV A
Sbjct: 118 RERQTPRDWLAAALATAGVLFVTFAPGHAMPSLQTLAGDALVLAAVACEAVFILLNRRLA 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF-LGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + +V F + + + + +
Sbjct: 178 APVPPLALSTAMSGLGFVLALVPAAFEWQAVASGWTVGAVSAIVYYALIPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + R +VV M+V
Sbjct: 238 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLTGTRVAGISLVVAGMLV 287
>gi|116493375|ref|YP_805110.1| DMT family permease [Pediococcus pentosaceus ATCC 25745]
gi|116103525|gb|ABJ68668.1| permease of the drug/metabolite transporter (DMT) superfamily
[Pediococcus pentosaceus ATCC 25745]
Length = 304
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 93/290 (32%), Gaps = 11/290 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFA 70
+ KE + G + A +WGI+ + + Q + +S R L + +
Sbjct: 1 MEKEVLNKHIGKGIFWALLASCMWGISGTVLEVISQGESIPASWFLSARTLGAGLVLIVI 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + +L ++ L + F ++ ++ +++P+
Sbjct: 61 SFIKYRM-QIFDVFKSVKTVLWLLAYAIFGLMANLLTFYISVQEGNASASTILQYLSPLF 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCF 183
V VF + R +IA ++ + + + H I L I +A +
Sbjct: 120 IVLGSLVFQRVRPMRSDVIAFVIAMAGVFLAITHGNIHELAISNKALIWGILSGITAAFY 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
PV + I + I + + L +
Sbjct: 180 VVLPKPVTKNHPPMIVLGWALIIGSILFNIHQPVWVDTPALTPQLMLSMATVILVGTILP 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F + +K A + V I++ P++ V S+ L P + V I +V
Sbjct: 240 FWALLHSLKFAPSAVVSILDAVQPVVTFVLSLLFLGHPFNVVELIGAVLV 289
>gi|260467078|ref|ZP_05813258.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259029187|gb|EEW30483.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 300
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 92/294 (31%), Gaps = 16/294 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F+ +LWG + + ++ VS + ++ R + ++ + +
Sbjct: 6 YIFLLLTTLLWGGNSVAGKLAVDHVSPMTLVFLRWVLAVAILLPIGWRTIQE----DWPV 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ A+ + F AL S PV+ + +F R++
Sbjct: 62 VRRHWFVLAALGASGFTLFNTIFYTALNYTTAINVSIEQAAMPVLIIVANFIFFHLRVSW 121
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
QI +L I +++ H + L V +S Y + PV +
Sbjct: 122 AQIAGVVLTIFGVVLTACHGDPRRLLALELNFGDAIMLVAVVLYSGYSVGLRMKPVMRWQ 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + V A+ + G+ T+ + + + G +
Sbjct: 182 SLMLSLAVAALITSLPFFLWEVAAGKVIVPDARGWTVIVYTAIGASVISQITYIRGNELI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ G+ P+ + SV I+ + + + +V+ + + +
Sbjct: 242 GANRAGLFINLVPIFGTLLSVLIVGETFQLYQALALVLVLGGIALAEYSGRKTA 295
>gi|242006302|ref|XP_002423991.1| transmembrane protein, putative [Pediculus humanus corporis]
gi|212507273|gb|EEB11253.1| transmembrane protein, putative [Pediculus humanus corporis]
Length = 315
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/304 (9%), Positives = 82/304 (26%), Gaps = 11/304 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
K + G L F + + ++ + L ++ +E++ R + + + +Y
Sbjct: 6 KNSEKKSLWKGPLLAFLSGTFFTLSSAAVKALTTINPMELLVIRSIVQIIFMLIIAIYVK 65
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L K G++ IL + +S + + +
Sbjct: 66 KNLFGPKGYRLMLNIQGLVGGLTLILLFFTFRRLPLGDATTIIFSSPVFVMVLSFIILRE 125
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFA 184
L ++ +++I + S I + +
Sbjct: 126 PCGFFRALIVALLLLGVILIAKPPFIFQFFYHVEQSYDVLGYSSAVLATIFMALNIVVIR 185
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ S + L + + F+G + + L +L
Sbjct: 186 KCKDVHFSIVVLQLSTWSLIFSGILLYILVEFNGDKIVIPQGTNEWLLTSLVSVLGLAGQ 245
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + V ++ +L V + + D + + +++ +
Sbjct: 246 VLVARALGIEDAGKVAVIRSLDIILAFFLQVTVFGEIPDWMSGLGAAAILLCVTGMTFEN 305
Query: 305 VINS 308
I +
Sbjct: 306 QIQN 309
>gi|209515917|ref|ZP_03264778.1| RarD protein, DMT superfamily transporter [Burkholderia sp. H160]
gi|209503575|gb|EEA03570.1| RarD protein, DMT superfamily transporter [Burkholderia sp. H160]
Length = 298
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 48/289 (16%), Positives = 113/289 (39%), Gaps = 4/289 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SL 80
G A ++ + Y L+ ++ L++ + R++W++PG + +L
Sbjct: 7 RRGIALSAGASAMFALLSAYATLLKPLTGLDIFAWRIVWTVPGALLLVAVRRRLPILSAL 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + PK ++ +A +L V F++A L + S YF+ P++ V +G + +
Sbjct: 67 VVRMMTQPKLGAAMIVTAGLLGVQLWIFLWAPLHGRMLEVSLGYFLLPLVMVLVGRFYYR 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ LQ +A + + +G + V + + +
Sbjct: 127 ERLDALQWLAVACAAVGVAHELWVTG-AFSWPTLVVALGYPPYFVLRRRINQDSLAMFTV 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + + + L L G G L++ + + ++ G
Sbjct: 186 EMALLLPVAILSIVVGGSLQAIAGRGEMWWLLLPGLGALSTLALASYLKASRLLPVALFG 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ Y P+L++ S+ +L++ + + + + IA+ + L +V
Sbjct: 246 ILGYVEPVLLVFVSITLLRETLSAAQLATYVPIWIAVALTALYSVRFVR 294
>gi|293372696|ref|ZP_06619078.1| putative membrane protein [Bacteroides ovatus SD CMC 3f]
gi|292632505|gb|EFF51101.1| putative membrane protein [Bacteroides ovatus SD CMC 3f]
Length = 292
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 93/292 (31%), Gaps = 5/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+S+R + +
Sbjct: 1 MNRIKGILYAAVSSSTFGLAPFFSITLLLAGFSAFEVLSYRWGVAAIVLTLFGWCSGCNF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K L + +L + + + I + ++ F
Sbjct: 61 RLAKKDLLVVFLLSLLRATTSFSLLIAYQNIATGVASTIHFMYPLAVSLAMMFFFHEKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS---SEG 195
L L L + ++ S + + +A ++ +Y +
Sbjct: 121 LLVMLAVLMSLFGAALLSSGELEAKSGDTIVGLVAACISVFSYGGYIIGVRTARAAQINS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V+ + A+FY++ + G H + L + IK A
Sbjct: 181 TVLTCYVMGMGAVFYLIGAMATFGLHLVTDGYIWLIILGLALPATAISNITLVRAIKYAG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I+ PL +V VF+ K+ I ++++A+ + + +
Sbjct: 241 PTLTSILGAMEPLTAVVIGVFVFKELFTLNSVIGILLILLAVGMVVFHKQKS 292
>gi|289450493|ref|YP_003474543.1| hypothetical protein HMPREF0868_0204 [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289185040|gb|ADC91465.1| putative membrane protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 305
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 87/289 (30%), Gaps = 10/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L LWG + + Q + + ++S R+L + F
Sbjct: 5 NKRKGMLLAALGGCLWGFSGVLAQLILDCGIGSEWLVSCRLLLGGLCILVYSGIFKHE-H 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ FS +++ F + + F++PV+
Sbjct: 64 TWAIFRSRRAVIRLVCFSFIGMSLVQYAFFKTIELSSAAFATIIQFISPVLLYGYELARG 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGS 192
+RL L + + I ++++ L +++ S + P+
Sbjct: 124 IKRLRLLDLSLIIAAIFGVVLVVTDGEFSRLHVSLPALLVGLLTALSVVSYTVLPQPLIK 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ G + A + G L + L F +
Sbjct: 184 TYGAAPTVGFGMFIAGVCFQFWHPLSGLPVHLDAKVLFYLTLMIILGTVVAFLAYLQSTV 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + PLL+ + SVFI + I I++++++++
Sbjct: 244 YIPGSMACLFTALEPLLVSILSVFIFGKRFSYGEVIGIAIIMVSILLFS 292
>gi|284032215|ref|YP_003382146.1| hypothetical protein Kfla_4313 [Kribbella flavida DSM 17836]
gi|283811508|gb|ADB33347.1| protein of unknown function DUF6 transmembrane [Kribbella flavida
DSM 17836]
Length = 322
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 84/291 (28%), Gaps = 10/291 (3%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + ++ L + RVL + +V L + +G
Sbjct: 23 AAIWGCSFLFISVGVRELHPLYLALGRVLAGSAVLVAFLVIKRESLPREPRIWAHTFVLG 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + +G L + V PV + + + ++ +
Sbjct: 83 AIGSAIPWTLFGYGEQRVPSLLAGIWNGITPLIVLPVAVLVFRTEKFTVQRVIGLLVGFV 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+++ L L G L + + + + G + L+ L
Sbjct: 143 GMMVVLGAWNLQGGADLTGQILCMAAAVFYGIAVPYQKRFVAGSKLSGTALSAGLLLCAT 202
Query: 213 WNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + L L GL + F + I+ S ++
Sbjct: 203 VQLAIVAPIATGEAPPMPWTLSPEVIGSVLALGGLGSGVAFVLSMRNIRLIGASMSSMVT 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y P+ I V +L + + + + +V+ + V +K
Sbjct: 263 YLMPIFAIAVGVLVLDEHLTWYQPVGALVVLTGVAVSQGILRRPVRASKKS 313
>gi|237739715|ref|ZP_04570196.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|237745142|ref|ZP_04575623.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|229423323|gb|EEO38370.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229432371|gb|EEO42583.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
Length = 287
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/284 (9%), Positives = 85/284 (29%), Gaps = 11/284 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+++ A LWG + + + + V++ R + + + F
Sbjct: 1 MIYLLIAAFLWGTSFIAGKIAYDMLDPSLVVAIRYILASIILLPMTFSFMKKKEESFT-- 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ + L + + PV+ +G +F KE+ +
Sbjct: 59 -KKDFILLVILGILTYPLTSMLQFIGLSFTSASSATTIIGIEPVMITIVGFIFFKEKASP 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
+ + ++ + + S + +S S +
Sbjct: 118 IVFLLGIIAFFGVALTVGVSALENVSFFGCFLVFLSTIVVSFWVRLSKKILTKMNSNYYT 177
Query: 205 ------IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + ++ G++R++ S
Sbjct: 178 ALTIQLGTLFALPIMLFLVKSWEIHYSLKGIIALLYLVVGCSIGAGWFWNKGLERSEASK 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G+ P+ I+ +V +L + ++ + I +V+++ + ++
Sbjct: 238 SGVFLALEPVFGILLAVLVLGEKLNFLSIIGIILVILSAAICMI 281
>gi|257126697|ref|YP_003164811.1| hypothetical protein Lebu_1958 [Leptotrichia buccalis C-1013-b]
gi|257050636|gb|ACV39820.1| protein of unknown function DUF6 transmembrane [Leptotrichia
buccalis C-1013-b]
Length = 296
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 90/288 (31%), Gaps = 11/288 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L A W I+ + + L S ++S R L S +F +V+ S
Sbjct: 6 KLRGMLLASLASSFWAISGISGEILFKQFNFSSDWLVSTRTLVSGILLFMIVVFIEK-KS 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+L+ ++G+++F + + + + + F P S+
Sbjct: 65 ILRPLKNKWDSMGIILFGVAGMYLVQYTYFKTIELSNVSFATILQFTAPFFIFIYESIKN 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGS 192
++ + + + IL ++ + LS + ++ +
Sbjct: 125 RKLPSISTVTLLFMTILGVVFIATKGNFSNLSVSLEALLFGLVSAVMIAFYSTYPKKLLK 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + I + +I L S + I+ +
Sbjct: 185 KYGSITIVGWGMIIGSVISNIIHPIWEIQGDINTKSIIQVIIVVILGTSIAYLIYIASLN 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S GI+ P+L V SV I + I F +V +++ +
Sbjct: 245 YISSSLAGILTAFEPVLAAVLSVVIFGLKFSIIELIGFVLVFVSIFIL 292
>gi|190408480|gb|EDV11745.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
Length = 414
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 37/312 (11%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS----------VLEVISHRVLWSLPGVFFAIVYF 74
+G + + +Y + T+ LE L+++ R++ + G +
Sbjct: 69 IGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYIN 128
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+S + P+ LV Y+L+ F+ P +++FL
Sbjct: 129 KSTISDVP--FGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFL 186
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------------------- 172
V L+ER ++ + +L+ +L ++++ S +
Sbjct: 187 SWVILRERFTKVEALGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRMIATL 246
Query: 173 ---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ S + I + + L + ++ N + +
Sbjct: 247 VGLWGVLGMSCVYIIIRYIGKRAHAIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQ 306
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + + GI+R + +M YT L + V + K + I
Sbjct: 307 WILFGNLGVSGFIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIG 366
Query: 290 FGIVVIAMVVYL 301
I++ A + +
Sbjct: 367 MIIIISATLWVI 378
Score = 46.4 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 48/152 (31%)
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ L+++T+ + + V+ ++
Sbjct: 68 NIGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYI 127
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S G +L+ G F Y + +S ++ + AP L I S
Sbjct: 128 NKSTISDVPFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLS 187
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
IL++ V + I ++ +V+ + P+ +
Sbjct: 188 WVILRERFTKVEALGSLISLLGVVLIVRPSFL 219
>gi|150017269|ref|YP_001309523.1| hypothetical protein Cbei_2409 [Clostridium beijerinckii NCIMB
8052]
gi|149903734|gb|ABR34567.1| protein of unknown function DUF6, transmembrane [Clostridium
beijerinckii NCIMB 8052]
Length = 286
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 93/282 (32%), Gaps = 6/282 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F+ + + + + + + + R + SL F I G
Sbjct: 7 SNRKKGIIFITASAFGFAMMSAFVKISGDLPSFQKTFFRNIVSLMVAFALISKHRGNFFG 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ K + + Y++ + ++P + +FLK
Sbjct: 67 QKNNQKTLLLRSIFGTLGILF------NFYSIDKLVLSDANMLNKLSPFFVIIFSGIFLK 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++N QIIA ++ + L + S + AIA A V S G
Sbjct: 121 EKVNIKQIIAIIIAFIGTLFIIKPSLNLEIMPAIAGILGGVTAAAAYTCVRSLSGKEHPE 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + V ++ NI + L+ G+ S + K A +
Sbjct: 181 TIVFYFSFISSVITFPLMIIYYENMNIMQLICLLLAGIFASLGQFGITLAYKYAPAKEIS 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I +YT + + S+ + D + I + ++ + + L
Sbjct: 241 IFDYTNIIFSAIISLCLFGILPDYLSLIGYVVIFSSSLYMFL 282
>gi|296501342|ref|YP_003663042.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
gi|296322394|gb|ADH05322.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
Length = 308
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 100/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 183 ECGTTVVIGWGMLIGGMALLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 296
>gi|81428951|ref|YP_395951.1| putative transport protein [Lactobacillus sakei subsp. sakei 23K]
gi|78610593|emb|CAI55644.1| Putative transport protein [Lactobacillus sakei subsp. sakei 23K]
Length = 302
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/301 (10%), Positives = 86/301 (28%), Gaps = 11/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G I WGI +Q+L ++ ++ ++ S + +
Sbjct: 3 QQRRKGIYLAILGSIFWGIQGPVSQWLFTDTPIAPEWLMGVKMGLSGLFLLGYA-FSKQP 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + A +L F+ L+ + + T+ + V+ + + V
Sbjct: 62 KTVTAVWRQPRDAGRLLAFAILGLSAVQYAYFLTIQASNAPTTTILQQLGTVMIIIISLV 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
+ + ++IA ++ +L ++ L L + + +S +
Sbjct: 122 IYHKTPSRTELIAVIVALLGTWLLVTKGQLTQLSISGAALGLGLCLGFSGALNTLIPGKL 181
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + L + F
Sbjct: 182 FQKYDTLVIVAWAMLIGGVLFNVIHPFWVDAPPMNMPTIISVLFIAIFGTALANLCFLGS 241
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ +T G++ PL + +V LK + I +V+ + + K
Sbjct: 242 LNYITPTTAGLLNTFEPLAATIGTVLFLKTSFNHWEVIGGLLVISTVFILSFGNRRGISK 301
Query: 311 N 311
Sbjct: 302 K 302
>gi|53712579|ref|YP_098571.1| hypothetical protein BF1287 [Bacteroides fragilis YCH46]
gi|60680793|ref|YP_210937.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343]
gi|253563395|ref|ZP_04840852.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265762719|ref|ZP_06091287.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52215444|dbj|BAD48037.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60492227|emb|CAH06992.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343]
gi|251947171|gb|EES87453.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263255327|gb|EEZ26673.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 304
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 113/300 (37%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++ G ++ + +G+ PL+T L ++ ++ +R L+S + +
Sbjct: 1 MKSLKGIIYAMISSGTFGLIPLFTIPLMGNMEMNESNILFYRFLFSTLMMGAVCLLHKST 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + L + + + A+ F IY+ + + +F+ P+ FL V
Sbjct: 61 LKINMKHLISI------IGLGALYALTALFLIYSYHYITSGVATTIHFLYPICVSFLMVV 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVG 191
F KE+ + +AA L ++ + +M G + + I + + Y A + +G
Sbjct: 115 FFKEQKSKSLFLAASLSLIGVALMCWSGGGSIRLMGIGLAALTILTYGIYIVALNQLDIG 174
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ VL + + +++ F+ G L L +
Sbjct: 175 KLPAEVLTFYVLLGGCVIFFIYSLFTAGISSIPSTKAGFYILALAFLSTVISDLTLILAV 234
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K A +T I+ PL+ +V V + + I ++++++++ +L K
Sbjct: 235 KYAGSTTTAILGSMEPLVAVVVGVLVFSEHFTLQSLIGLLLILMSVIIVILADQQKKSKR 294
>gi|187780030|ref|ZP_02996503.1| hypothetical protein CLOSPO_03626 [Clostridium sporogenes ATCC
15579]
gi|187773655|gb|EDU37457.1| hypothetical protein CLOSPO_03626 [Clostridium sporogenes ATCC
15579]
Length = 324
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/304 (10%), Positives = 79/304 (25%), Gaps = 11/304 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + V A + WG + T+ L + S+P +F+ I F SL
Sbjct: 6 SDKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYLIYSFKKDPSL 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K K + LL V+++ K
Sbjct: 66 FKVDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR-----------KTIP 189
+ +LI ++ G LS F +
Sbjct: 126 FTTQKSISMLLILIGCFMMCEVHKLGNFNLSTKGIFWGLISGFTFALQILLAKVSNEKYH 185
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ AI ++ + + +
Sbjct: 186 YSHNSLLTYSFLFAAIFLFPFMDMKNNIHIFKSSNNLFFLFKNIFWSVVGTLIANTAYVK 245
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + S ++ ++ V + Q ++ V+ + ++++++++ + +
Sbjct: 246 SVEYIEASIASMVSSLELVIASVLGFIVFNQALNLVQILGMALILVSIILLEMKKSVLLK 305
Query: 310 KNKT 313
K
Sbjct: 306 LFKK 309
>gi|196035509|ref|ZP_03102913.1| transporter, EamA family [Bacillus cereus W]
gi|195991810|gb|EDX55774.1| transporter, EamA family [Bacillus cereus W]
Length = 294
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKQDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAEF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSSPIEPISLYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + F+L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWFLLNEALSSNFFIGGILIICSVFITTFEK 293
>gi|149917884|ref|ZP_01906379.1| probable transmembrane protein [Plesiocystis pacifica SIR-1]
gi|149821404|gb|EDM80806.1| probable transmembrane protein [Plesiocystis pacifica SIR-1]
Length = 331
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 84/277 (30%), Gaps = 16/277 (5%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
I+WG + + L+ + L R + + + + ++ +P A
Sbjct: 3 CIVWGSAWVVVRDGLDTLPPLFSAGVRFVIAGAFMAALA-----PWARRREGGADPPAWL 57
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF-LKERLNHLQIIAA 151
L+ + T A+ +G L S + V PV+ V ERL LQ +
Sbjct: 58 WLLVATTNFAIGYGVVYSVQQVLPSGLVSLLWAVYPVLMVLGAHFILDGERLGALQWLGF 117
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTW---------SAYCFARKTIPVGSSEGFFIEMCV 202
LL L + + L A + +A K S +
Sbjct: 118 LLGFLGVAALFGSDLDSLGPTARRDSALLLLSPAATAAGTLTLKRHGSQCSSVVLNRNAM 177
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL + G L + ++ + ++ S + +
Sbjct: 178 LFGGALLLLAALISGEQLPSQCGARTILGMLYLALFGSVLTLGLYYWVLRHGSASRLSLT 237
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P++ + I +PI + ++ + V
Sbjct: 238 AYATPVIALSLGWVIRDEPIYASTIVGALLIAGGVAV 274
>gi|21221102|ref|NP_626881.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|6900944|emb|CAB71820.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length = 318
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/270 (11%), Positives = 81/270 (30%), Gaps = 12/270 (4%)
Query: 37 WGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
W + + ++ L V ++ R + +L V G + + +G +V
Sbjct: 48 WSGSFVTSRALGDSVPPVQHAFWRWVVALAVVAPF-----GARRAWRQRALIRRHLGFVV 102
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
++ + + + + + L RL ++ +
Sbjct: 103 LASLLGVTVYNTLVNQAGVTTPAANMGMIMAASPVLMALCERAGGVRLGVRRVAGLGVAC 162
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE------GFFIEMCVLAIPALF 209
+L++ G + + + +A CF + + GF + L
Sbjct: 163 AGVLLLVGGDGAAFSAGDLWMIAAACCFGSYSALLRRRPEGLDGVGFLFTTFLAGTVLLL 222
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ F L ++ F ++ + S G + Y P+
Sbjct: 223 PAHGVSLAVQGGFHPTPGTVWPLLYVGVASSAVAFFAWNKAVSLIGPSRAGAVYYLQPVC 282
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + S +L +P + +++ +V+
Sbjct: 283 VALLSWSLLAEPTGWAQAGCMALILGGVVL 312
>gi|119383789|ref|YP_914845.1| hypothetical protein Pden_1038 [Paracoccus denitrificans PD1222]
gi|119373556|gb|ABL69149.1| protein of unknown function DUF6, transmembrane [Paracoccus
denitrificans PD1222]
Length = 289
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 86/292 (29%), Gaps = 7/292 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
A G F+ A +G+ L + + + +++ R ++ + +
Sbjct: 1 MPTARSDNWRGAGFMLLAMAGYGLNDLMVKLVAAHLPAAMILAIRSAMAVLLLLGLLALR 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ +L +++AL + Y +TP++ +
Sbjct: 61 REIWQIRASLTGRAMLRALLD------TGATISYVHALTGLSLANAAAIYQMTPIVFMLA 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L+E + I L +L++ G L A+AV + C + + + S
Sbjct: 115 SAALLREAIPRSGWIGTALGFAGVLLVIRPDGAMLDPHALAVVVAVLCSVARDLLMRGSL 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
L + G L+ + + +
Sbjct: 175 MPSPICLALLSAVCTSLFGLGALATGGAVAPEPVQVGLLVLAATAIAVGYVFLALATATG 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
V Y+ + + + +L Q D + G++++ + LP
Sbjct: 235 GSGFVSPFRYSILVYATILGMVVLGQYPDAPALLGIGLILMGGIAVALPRSR 286
>gi|299146807|ref|ZP_07039875.1| putative membrane protein [Bacteroides sp. 3_1_23]
gi|298517298|gb|EFI41179.1| putative membrane protein [Bacteroides sp. 3_1_23]
Length = 292
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 91/292 (31%), Gaps = 5/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+S+R + +
Sbjct: 1 MNRIKGILYAAVSSSTFGLAPFFSITLLLAGFSAFEVLSYRWGVAAIVLTLFGWCSGCNF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K L + +L + + + I + ++ F
Sbjct: 61 RLAKKDLLVVFLLSLLRATTSFSLLIAYQNIATGVASTIHFMYPLAVSLAMMFFFHEKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS---SEG 195
L L + ++ S + + +A ++ +Y +
Sbjct: 121 LLVMFAVLMSLFGAALLSSGELEAKSGDTIVGLVAACISVFSYGGYIIGVRTTRAAQINS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V+ + A+ Y++ + G H + L + IK A
Sbjct: 181 TVLTCYVMGMGAVLYLIGAMATFGLHLVTDGYIWLIILGLALPATAISNITLVRAIKYAG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I+ PL +V VF+ K+ I ++++A+ + + +
Sbjct: 241 PTLTSILGAMEPLTAVVIGVFVFKELFTLNSVIGILLILLAVGMVVFRKQKS 292
>gi|294340727|emb|CAZ89119.1| putative Permease of the drug/metabolite transporter (DMT)
superfamily [Thiomonas sp. 3As]
Length = 354
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 87/280 (31%), Gaps = 19/280 (6%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +WG + T+ L Q VL++++ R + + + T +
Sbjct: 25 VLLLLVAAVWGGSYGVTKLLAQQWPVLDLLALRFGLTFLILSPTL--------RPLFTAQ 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + L + Y + + + ++ + L +
Sbjct: 77 WRGGLAVGSILGLNLLAVFLCETYGVTLTTAANAALLISLCVALTPLVEWALLGQPPTLR 136
Query: 147 QIIAALLIILSLLIMTLHSGIP----------LLSLAIAVTWSAYCFARKTIPVGSSEGF 196
AA L ++ +++ SGI L +L AV + + +
Sbjct: 137 VWQAAGLSVIGAGLLSATSGIGRPGLGDALVLLAALLRAVMVTQTRRLAARHALPALTLT 196
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ V+ + V L L F F +Y R
Sbjct: 197 AVQSGVVTVGLAALVWVWRGPHWPSIPLRASFWAGMAFLVLLCTVFAFFAQNYAASRTSP 256
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
S V ++ + PL ++ V +L + + + G++V A
Sbjct: 257 SRVSLLMGSEPLFGVLVGVALLGEKMTIPGWLGGGLMVFA 296
>gi|237744428|ref|ZP_04574909.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|260494019|ref|ZP_05814150.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_33]
gi|229431657|gb|EEO41869.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|260198165|gb|EEW95681.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_33]
Length = 302
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L +F A +WG + ++++ R + ++ + ++
Sbjct: 1 MDKKRYFGDLMLFLAAFIWGTAFVAQVTGMDRIGPFTFNMARSVIAIICLGAYLIITKAK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L V + + L T F +I FL +
Sbjct: 61 LPKDIGVLLQGGLVC-----GFFIFMGTSLQQIGLQYTTAGKTGFITSFYILIIPFLTMI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVG 191
FLK +++ L ++ ++ + L ++ + S + A
Sbjct: 116 FLKHKIDLLTWVSIIIGFIGLYLLAIPSLNDFTINKGDFIVFLGSFCWAGHILIIDYYSK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP--DTLFLIGYGLLNSFVFCIFSY 249
+ + + + E + NI L + + +
Sbjct: 176 KVNPVELSFLQFVVLTILSGICALLFENETATMNNIFLSWKSIAYAGLLSSGIAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K ++ + ++ F+L + + + + IV +A++ +P I
Sbjct: 236 GQKYTNPVVASLILSLEAVFAALAGYFMLDEIMTSREFLGCSIVFLAIIFSQIPKDIFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|110639848|ref|YP_680058.1| permease [Cytophaga hutchinsonii ATCC 33406]
gi|110282529|gb|ABG60715.1| conserved hypothetical protein; possible permease [Cytophaga
hutchinsonii ATCC 33406]
Length = 273
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 97/277 (35%), Gaps = 8/277 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++ + + + + L + + + V++ I R ++S+ AI
Sbjct: 4 GIRYMLLSIVSFSLMHLCVKAIPDIPVVQTIFLRSVFSIVFCCIAI--------KQAKVS 55
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
LV + + F Y++ + P ++FL VFLKE++ H
Sbjct: 56 VWGNNKTFLVLRGLVGMLSLICFFYSIQMLPLGTAVTIGNLVPFFTLFLAFVFLKEKIPH 115
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++ + + + +L+M I +A+ A V ++
Sbjct: 116 IKWLFFAVSFVGVLLMKGLDDELPALGIILGLCAAFFTATAHFVVRKLRDTDDTSVIMFY 175
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + + + + LFL+ G+ + K ++ + + Y
Sbjct: 176 FPFITIPFMLPFAILQWETPDAREWLFLVLIGITTHVGQLFLTKAYKHEEVKNISYVYYL 235
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+L V V + I ++ G+V++ MV+ +L
Sbjct: 236 GIILSFVYGVSFFGEFISVKSSVGVGLVILGMVLNML 272
>gi|11498121|ref|NP_069346.1| hypothetical protein AF0510 [Archaeoglobus fulgidus DSM 4304]
gi|6136536|sp|O29740|Y510_ARCFU RecName: Full=Uncharacterized transporter AF_0510
gi|2650107|gb|AAB90720.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 289
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/278 (10%), Positives = 77/278 (27%), Gaps = 4/278 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++W + ++ + L+++ + +R L + P + + + G
Sbjct: 7 LLLALTMLIWAGSFIFIKIGLKELDPFNLAFYRFLLASPLLMAWVFWKRGLAKPSGSEWL 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + + + FV V + K L
Sbjct: 67 HLSVLALSGVTLLYAFQFLALKYTTATNASILINTSAVFVALWGLVKGEANPRKLAGVFL 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI---AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+LI+ + S + + W+ Y + +
Sbjct: 127 SFAGVVLIVSKGTLEFFSSKTIFGDVLMIVDGFLWAVYTVLGSKMLLKYDHETLTAYAFA 186
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L L + F + ++ Y + A ++V +
Sbjct: 187 LGTIFLIPFALMSGFANPVTFNPETVAALLYLSILCSVFAYVVWYYALTNADSTSVAVYV 246
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y PL + + + L + D I I + + +
Sbjct: 247 YLVPLFTAIFAFYALNEKPDFFTAIGGIITIAGVYLTT 284
>gi|319779909|ref|YP_004139385.1| hypothetical protein Mesci_0162 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165797|gb|ADV09335.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 307
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 99/293 (33%), Gaps = 13/293 (4%)
Query: 14 LSKENASLPTMM-----GTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGV 67
+++ A T+ G L + L+ + ++L SV +V+ R + + +
Sbjct: 1 MTQPVAQNSTIRNVLLAGILLMLAGDFLFALNDAMGKWLVASFSVGQVVLIRSIGAFFVL 60
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
I + L + + + + + + F A++ Y
Sbjct: 61 GPMIA------NQGPAKLFRMERLELQLLRVVMTTLDTALFYAAVVYLPLADVMSFYMAG 114
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
P+ L + L E++ + +A LL +LIM S + + FA
Sbjct: 115 PIYVAALSHLLLGEKVGWRRWMAILLGFCGVLIMLKPSSAAFSLSSGFALVGSISFAFAI 174
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I G V +V S G + + D ++ G+++ +
Sbjct: 175 ILNRRLRGTSDTNLVTWQTIGTLLVGGVLSIG-AWQTPSALDLGAMLLLGIVSCGAHLMI 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ +K A ST+ + YT L +V + I GIVV+A +
Sbjct: 234 TRALKLAPASTLAPLHYTLLLWAVVFGLVFFGDVPGPRILIGSGIVVLAGLFI 286
>gi|320012047|gb|ADW06897.1| protein of unknown function DUF6 transmembrane [Streptomyces
flavogriseus ATCC 33331]
Length = 319
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 82/286 (28%), Gaps = 6/286 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + + +V R+L + A+ L T +
Sbjct: 11 SLIWGFSFLLIKVGTDGYAPFQVTFGRLLSGTAVLAVAMAVRRERLPRAARTWGHLFVAA 70
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + + + + + V L R + L
Sbjct: 71 FFLNALPFSLFAYAELTIPSTLAGICNATSPLWGMALSLVALSEDRPTRRRVAGLGLGFL 130
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L SG+ + +A+ S + G + L +
Sbjct: 131 GVLTVLGAWQGFSGLDVTGTVMALLASLSYPVGWIYVRRTLVGTGSSRLSLTGSQLLLGT 190
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ V + P + L + ++ +T ++ Y P
Sbjct: 191 VQLAVVLPMFTDMPAHVPLFPTLAVIALGALGTGLAVLLQYGLVEEVGPTTAQMVTYFIP 250
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ + V +L + ++ + +V+ + + ++G ++
Sbjct: 251 VIATAAGVTLLGERLNWNTPVGALVVLAGAALTQSRSRGSTGASRR 296
>gi|296136599|ref|YP_003643841.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
gi|295796721|gb|ADG31511.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
Length = 354
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 87/280 (31%), Gaps = 19/280 (6%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +WG + T+ L Q VL++++ R + + + T +
Sbjct: 25 VLLLLVAAVWGGSYGVTKLLAQQWPVLDLLTLRFGLTFLILSPTL--------RPLFTAQ 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + L + Y + + + ++ + L +
Sbjct: 77 WRGGLAVGSILGLNLLAVFLCETYGVTLTTAANAALLISLCVALTPLVEWALLGQPPTLR 136
Query: 147 QIIAALLIILSLLIMTLHSGIP----------LLSLAIAVTWSAYCFARKTIPVGSSEGF 196
AA L ++ +++ SGI L +L AV + + +
Sbjct: 137 VWQAAGLSVIGAGLLSATSGIGRPGLGDALVLLAALLRAVMVTQTRRLAARHALPALTLT 196
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ V+ + V L L F F +Y R
Sbjct: 197 AVQSGVVTVGLAALVWVWRGPHWPPIPLRASFWAGMAFLVLLCTVFAFFAQNYAASRTSP 256
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
S V ++ + PL ++ V +L + + + G++V A
Sbjct: 257 SRVSLLMGSEPLFGVLVGVALLGEKMTIPGWLGGGLMVFA 296
>gi|228983781|ref|ZP_04143978.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228775976|gb|EEM24345.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 310
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 101/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGLFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + LI + + F +
Sbjct: 181 SLIKECGTTIVIGWGMLIGGIALLIFNRSFGWSQLSQTFTPKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + + ++++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGSYQLLGGVCIILSVIFLTMPQ 298
>gi|254438584|ref|ZP_05052078.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
gi|198254030|gb|EDY78344.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
Length = 320
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 80/267 (29%), Gaps = 7/267 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L A+ ++ ++ + L + S ++++ VL+S P ++
Sbjct: 2 SSNAKGALLALIAFGVFATHDVFVKTLGAIYSPIQIVFFSVLFSFPLATIMLM------R 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K P+ + YA T F P++ L L
Sbjct: 56 DAKPGNLLPRHPWWMALRTVASVATAVTAFYAFTILPLAQTYAILFAAPLLITILAIPIL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A ++ + +L++ L +A +A + +I V
Sbjct: 116 GEVVRLRRWLAVIVGLTGVLVVLRPGSTDLNLGHVAALTAAVGGSIASIVVRRIGADERP 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L P + V G + I + + + + +
Sbjct: 176 VVMLLYPMMANFVLMGIGLAFVYIPMPIEHLGLVALVAAFAWTAGRCIIAAYQSGEAAII 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVR 286
M+Y+ + V + ID
Sbjct: 236 APMQYSQIIWATVYGALFFDEHIDRAT 262
>gi|126650200|ref|ZP_01722428.1| Transporter, Drug/Metabolite Exporter family protein [Bacillus sp.
B14905]
gi|126592850|gb|EAZ86832.1| Transporter, Drug/Metabolite Exporter family protein [Bacillus sp.
B14905]
Length = 291
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 90/283 (31%), Gaps = 15/283 (5%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ +LWG + + + S + + + R L ++ + + K
Sbjct: 3 LMLVTSLLWGGNFVVAKTLVAHASPMTLTTVRWLIAVIVLVPLV-----WWKEKKLVPPK 57
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
V +L+ T +A+ F AL + + V LKE++ Q
Sbjct: 58 QAIVPLLLMGVTGVALFNIFQFLALERTTSTNAGLISTMNTISIALFSFVLLKEKITKWQ 117
Query: 148 IIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ A +L + ++++ L +A ++ + + +
Sbjct: 118 LSAMVLSLFGVVLVLSKGDWQLLLDFQSNTGDLWMLAAVCVWGLYSVCSKWAMQTASPLM 177
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + ++ + + L + ++ G+++ +T
Sbjct: 178 ATLYAGVFGVLLLLPFTSADFTFTNVNTSFILSMLYTGIISTVVCMVFWNIGVQKLGATT 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
GI P+ + + + + + ++ I IV++ ++
Sbjct: 238 SGIFLNFNPIFTALLAYLFIGENMSWLQGIGGLIVIMGCYLFT 280
>gi|221068728|ref|ZP_03544833.1| protein of unknown function DUF6 transmembrane [Comamonas
testosteroni KF-1]
gi|220713751|gb|EED69119.1| protein of unknown function DUF6 transmembrane [Comamonas
testosteroni KF-1]
Length = 293
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 92/279 (32%), Gaps = 16/279 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A +WG + + T Q L QV + V R L + + G+ L+ +
Sbjct: 18 LLLTALAPAIWGSSYIVTTQLLPQVPAMTVALLRALPAGLLLLVFARRLPQGVWWLRVFI 77
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A +V W + G + V P++ VFL + L L
Sbjct: 78 L----------GALNFSVFWSMLFVSAYRLPGGAAATVGAVQPLVVVFLAAWVLGSVLRP 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-----SAYCFARKTIPVGSSEGFFIEM 200
++ AL + + ++ L G+ L + IA A
Sbjct: 128 ASVLGALAGLAGVALLVLTPGVRLDATGIAAGLAGAVSMACGTVLTRKWRPPVPLLTFTA 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + ++G + + + + ++ GI R + + V
Sbjct: 188 WQLTAGGVLLLPVALWAGPDFPAPTPGHLIGLAWLGLVGAALTYVLWFRGIARLEPNMVA 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + +PL I+ L+Q + V+ +V+ + +
Sbjct: 248 PLGFLSPLTAILLGWAFLEQTLTAVQMAGVALVLGGIWL 286
>gi|94496219|ref|ZP_01302797.1| drug/metabolite transporter superfamily protein [Sphingomonas sp.
SKA58]
gi|94424398|gb|EAT09421.1| drug/metabolite transporter superfamily protein [Sphingomonas sp.
SKA58]
Length = 270
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 47 LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWG 106
+ + +E+++ R+LWSL + I+ + G L + + T NP+ V L SA ++A++W
Sbjct: 1 MHHIDAIEIVTQRILWSLL-LILPILAWRGTLPVFRATFGNPRLVVALAGSALMIAINWL 59
Query: 107 FFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG 166
+++A+ S YF+ P+++V LG + LKERL Q++A L + + I+ +
Sbjct: 60 TYVWAVNDNHVVAASLGYFLNPLVNVLLGVLVLKERLRRFQLLAIGLAAIGVAILAASAL 119
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
L A+ + + + L P + G F +
Sbjct: 120 TTLWISLTLAFSFAFYGLLRKLTPVAPMTGLGVETALLAPLAIAYLIWEAGHGGIGFGQD 179
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+P + LI G + + +F+ +R ++T+G+M+Y AP L + V +L + + +
Sbjct: 180 LPTSALLILSGGVTTVPLVLFATAAQRLPMATLGLMQYIAPTLQFLCGVLLLGEVLSIGQ 239
Query: 287 TIVFGIVVIAMVVYLLPTV 305
+ F ++ I ++++ ++
Sbjct: 240 MLSFALIWIGLILFAGDSI 258
>gi|52142166|ref|YP_084662.1| EamA family protein [Bacillus cereus E33L]
gi|51975635|gb|AAU17185.1| possible transporter, EamA family [Bacillus cereus E33L]
Length = 294
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 96/293 (32%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKIAEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKQDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAKF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + F + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMVWEFQSSPIEPISLYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ S + + P++ + F+L + + + I +++ ++ +
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWFLLNEALSSNFFIGGILIICSVFITTFEK 293
>gi|89075837|ref|ZP_01162221.1| hypothetical protein SKA34_15728 [Photobacterium sp. SKA34]
gi|89048458|gb|EAR54034.1| hypothetical protein SKA34_15728 [Photobacterium sp. SKA34]
Length = 311
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 85/284 (29%), Gaps = 12/284 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G ++ L+ I P++ + Q V+ ++S R + S+P +++ +
Sbjct: 24 KGIVYALIGTALFSIKPVFIKLAYQYGGDVVSIMSLRAISSVPIYIVMMLWLLR--KIEH 81
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ V I A+ L F+ P V + LK++
Sbjct: 82 RDNLKRYGLAASAIGILGYYVASYLDIAAMAHISAQLERLLIFLFPSFVVLISWSVLKQK 141
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------WSAYCFARKTIPVGSSE 194
A L + + + H + + + + A +
Sbjct: 142 PAQGTFKAIALGYIGVAFIVFHDLGSMGNNVLLGSGLAIASAFVFACYLIMSKKLITQMG 201
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + ++ + + G L + L + + +++
Sbjct: 202 SQLFTCIGMGSAGIIILIQSQWQGVNVIELDPVLILLGIALGIFCTVLPSFFVAAAMQKL 261
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S + + P + V ++ +L +P I VV +++
Sbjct: 262 NPSLLSLTSNVGPAITAVFAITLLNEPFTFYHAIGMLFVVYSVI 305
>gi|84515611|ref|ZP_01002973.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
gi|84510894|gb|EAQ07349.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
Length = 296
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/299 (9%), Positives = 78/299 (26%), Gaps = 8/299 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + G F+ A + + + L Q + +L + + L
Sbjct: 1 MENLRGAAFMVLAMFCFALLDTTIKVLSQSMSVGQA-----LALISIGILALLLGWSLVQ 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ + V AL S TP++ +FL
Sbjct: 56 RIPLWQTDYRNPRVILRSLCEVVGTCLISLALSLVPLTTVSAVIQATPLVVAMGAGLFLG 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + + IA ++ +L++ + A + + + +
Sbjct: 116 QSIGWRRWIAIIVGFGGVLLIIRPGLDGFNPATLLAVAGMLALASRDLLTRALHVTLSGV 175
Query: 201 ---CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + GE + ++ + + +
Sbjct: 176 QLGIHAFAFVLPASLVLMIAPGEPLVQPDAGTWALVLAGVFIGVMSYLSIIAATRFGNAG 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y+ + + +L + D I++ + + L + ++
Sbjct: 236 VISSFRYSRMIFALAIGFVVLGERPDAATLAGAAIIITSGIFTLWREARMRRASLVAEA 294
>gi|153828995|ref|ZP_01981662.1| putative membrane protein [Vibrio cholerae 623-39]
gi|229514596|ref|ZP_04404057.1| permease [Vibrio cholerae TMA 21]
gi|229522761|ref|ZP_04412177.1| permease [Vibrio cholerae TM 11079-80]
gi|229526279|ref|ZP_04415683.1| permease [Vibrio cholerae bv. albensis VL426]
gi|254225859|ref|ZP_04919462.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125621586|gb|EAZ49917.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|148875526|gb|EDL73661.1| putative membrane protein [Vibrio cholerae 623-39]
gi|229336437|gb|EEO01455.1| permease [Vibrio cholerae bv. albensis VL426]
gi|229340746|gb|EEO05752.1| permease [Vibrio cholerae TM 11079-80]
gi|229348576|gb|EEO13534.1| permease [Vibrio cholerae TMA 21]
Length = 297
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 86/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQVSAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILDEPIGLNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|317129681|ref|YP_004095963.1| hypothetical protein Bcell_2982 [Bacillus cellulosilyticus DSM
2522]
gi|315474629|gb|ADU31232.1| protein of unknown function DUF6 transmembrane [Bacillus
cellulosilyticus DSM 2522]
Length = 303
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 98/303 (32%), Gaps = 15/303 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M L + LWG L+ L S +EV++ RV + + +V +
Sbjct: 3 KMAFLMIVIGASLWGTIGLFVNGLYTFGFSPIEVVTLRVTVAFITLLVYVVI----KDIH 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+K + + A+ + + + P + +F KE
Sbjct: 59 SLKIKWKHLPYFFGTGVCSIVFFNWAYFTAIQEMNLSIAAVLLYTGPAFVTIMSRIFFKE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW---------SAYCFARKTIPVGS 192
+ ++IA + + +++ +++ + A I + +
Sbjct: 119 LITPQKMIALVTTFIGCVLVIGLLPFNDVTMFSFYGFIIGLSSGFGYALYSIFGKIALAN 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I L + +G F+ L L + + +++ G++
Sbjct: 179 YSSLTTTVYTFFIATLVLIPTSGLFNHGVSFINTQTVLLSLGLGIIPTVLAYLLYTKGLQ 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ S I P++ + VFI K + + + +V+A++ LP + K
Sbjct: 239 SIESSKASIATTIEPVVAALIGVFIFKDTVTYWQVVGMLCIVMAVMFMHLPWPVKLTKKA 298
Query: 313 TKK 315
+
Sbjct: 299 YRH 301
>gi|256851624|ref|ZP_05557012.1| DMT family permease [Lactobacillus jensenii 27-2-CHN]
gi|260661659|ref|ZP_05862571.1| DMT family permease [Lactobacillus jensenii 115-3-CHN]
gi|282933273|ref|ZP_06338659.1| DMT family permease [Lactobacillus jensenii 208-1]
gi|297205231|ref|ZP_06922627.1| DMT superfamily drug/metabolite transporter [Lactobacillus jensenii
JV-V16]
gi|256615582|gb|EEU20771.1| DMT family permease [Lactobacillus jensenii 27-2-CHN]
gi|260547716|gb|EEX23694.1| DMT family permease [Lactobacillus jensenii 115-3-CHN]
gi|281302569|gb|EFA94785.1| DMT family permease [Lactobacillus jensenii 208-1]
gi|297149809|gb|EFH30106.1| DMT superfamily drug/metabolite transporter [Lactobacillus jensenii
JV-V16]
Length = 302
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 90/293 (30%), Gaps = 12/293 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ----VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ A + WGI+ L+ + L ++ + + R++ S +
Sbjct: 9 ILAAIACVFWGISGLFGKNLFNSNPLITPIFLTKIRMVISGIIILLFAKIT--NQKPFTI 66
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
AV + + L F+ + + + F+ P +F + ++
Sbjct: 67 WKNKKDAVTVSAYGLFGLVPVQLFYFMVVKEANASIATVLQFIGPFFVIFWMLITKQQVY 126
Query: 144 NHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L +I+A L L + ++ H P ++ +
Sbjct: 127 RNLDLISATLAFLGVFLLATHGNLQTLTLSPGALFFGMLSAVGVATNTLIPRRIITSYPT 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + ++ + + F + ++ S
Sbjct: 187 VVITGWGLLIAGIALFIFDPSVPKISITWGMIIDLAGVIVIGTLIPFQWMAGALRYISPS 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T +++ P+ ++ SV + + + I +++ A+++ L + K
Sbjct: 247 TASLLDAFEPISAMIGSVILFNLILSPMDIIGSVMIIGAVLLVSLNPPRLTKK 299
>gi|217974129|ref|YP_002358880.1| hypothetical protein Sbal223_2971 [Shewanella baltica OS223]
gi|217499264|gb|ACK47457.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS223]
Length = 283
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 111/292 (38%), Gaps = 10/292 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M L + A +L L + LE V +++ +R L++ V + G L L
Sbjct: 1 MQPLLMILAAQLLIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + F+ A+L + + +P++ + L ++FL ER
Sbjct: 61 YYKVHLARALL-------IGLGNAIFMLAILHLPLATVTAVIYTSPLLLLVLSALFLHER 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +A ++ +L+++ + A A ++ + + +
Sbjct: 114 IGYRRSVAGIIGFTGILLISQP--TEFNLYIGLAFFGAMTSALNSLILKAYSTHEHPFSM 171
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L F +++ + ++P + GL + + + +RA S + +
Sbjct: 172 LFWSNAFAMIFLIPATLYESADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPV 231
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
EYT + + +IL + + V + G+V+ + ++ + K++
Sbjct: 232 EYTGLIFAALFGWWILDEELSLVMLVGIGLVIFSSILPSYSELKAKWKSRRS 283
>gi|50086092|ref|YP_047602.1| hypothetical protein ACIAD3081 [Acinetobacter sp. ADP1]
gi|49532068|emb|CAG69780.1| putative membrane protein [Acinetobacter sp. ADP1]
Length = 325
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 81/300 (27%), Gaps = 14/300 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P G+L A L+ ++ + +S L + + + +
Sbjct: 23 SPVQTGSLCAVSAAFLFSTKAIFIKQAYALSPLVDATLLMALRMISALPFFLLLCWFNRH 82
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++ L+ L F+ P ++V S
Sbjct: 83 HNQAISAKDWLVLIFSGLLGYYFASWLDFMGLMLISASLERIILFLYPTLTVLASSFLYH 142
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------------WSAYCFARK 186
++LN A L +++ L G S + A
Sbjct: 143 QKLNIKTWFAIFLSYGGTVLVMLQEGKNAPSQGGFWLGASLVFASAVAFAVYLLLTPALI 202
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + Y++ L + + +
Sbjct: 203 KKFGSWNFTGLASSVACLGTIMHYLIATPAPLTVINELPLAVWGYGISLGFFVTVIPTIL 262
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
GI+R S ++ P+L I+ +V L + ++ + + + ++ +++ L
Sbjct: 263 LMQGIQRLGASQSAMIASIGPILTILLAVIFLNEQLNLWQWLGCVLNILGVLLITLSKTR 322
>gi|261343724|ref|ZP_05971369.1| putative membrane protein [Providencia rustigianii DSM 4541]
gi|282568107|gb|EFB73642.1| putative membrane protein [Providencia rustigianii DSM 4541]
Length = 307
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 97/287 (33%), Gaps = 18/287 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + I+WG T + + L+ +S L + R +++ + + G + +
Sbjct: 17 MLQMVFVSIIWGGTFIAGRVLQTDISPLLSATIRFIFASIALISLLSLTKIGWKKITLSQ 76
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + + V+ F Y L + + P + + + KE++
Sbjct: 77 ----LGQIMLLGTSGIFVYQILFFYGLQVIPASRAALLVAINPAMIALISFLLWKEKVTQ 132
Query: 146 LQIIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++ I LL + +I+ G +A+ + T+ +
Sbjct: 133 IKGIGILLCVTGAVILLSDQTSDTRGFLTNKGDLAILGCVVSWGIYTVAGKHVIREVGAL 192
Query: 201 CVLAIPALFYVVWNGFSGGE--------HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ LF + G L + + L ++ + + G+
Sbjct: 193 HTVTYAVLFGTLLLILVSGMTGVLTIEGITHLSSNDFISLVYLGILGSALAYVWYYQGVD 252
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ G PL ++ L + I ++ + ++V+ +V+
Sbjct: 253 KLGAASAGSFIALNPLTAVIIGTLFLNEKITSMVLLGGCVIVLGLVI 299
Score = 43.0 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 40/142 (28%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
+L + F + ++ + + +
Sbjct: 16 MMLQMVFVSIIWGGTFIAGRVLQTDISPLLSATIRFIFASIALISLLSLTKIGWKKITLS 75
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
++ +F YG++ S ++ P ++ + S + K+ + ++
Sbjct: 76 QLGQIMLLGTSGIFVYQILFFYGLQVIPASRAALLVAINPAMIALISFLLWKEKVTQIKG 135
Query: 288 IVFGIVVIAMVVYLLPTVINSG 309
I + V V+ L ++
Sbjct: 136 IGILLCVTGAVILLSDQTSDTR 157
>gi|126734912|ref|ZP_01750658.1| integral membrane protein, putative [Roseobacter sp. CCS2]
gi|126715467|gb|EBA12332.1| integral membrane protein, putative [Roseobacter sp. CCS2]
Length = 323
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 85/273 (31%), Gaps = 7/273 (2%)
Query: 36 LWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
++ + + L + S ++++ VL S P ++ + P L
Sbjct: 17 IFSTHDVVVKILGGLYSPIQIVFFSVLLSFPLAMVMLM------RDVTPGTLVPVHPWWL 70
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
V YA T F P++ L L E + + +A L+
Sbjct: 71 ALRTVAAVVTGVSAFYAFSVLPLAQTYAILFAAPLLITILAIPVLGETVRLRRWMAVLVG 130
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ +L++ L +A +A + +I V + +L P + +
Sbjct: 131 LGGVLVVLRPGETDLSLGHLAALAAAIGGSVASIIVRKIGSEERPVVMLLYPMMVNFIVM 190
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
+ + I L + + + + + M+Y+ + +
Sbjct: 191 ACALPFVYQPMPIEHLGLLGIIATFAWIASRLVIAAYQSGEAAIIAPMQYSQIIWATIFG 250
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ID I G+++ + + +L +
Sbjct: 251 FIFFGETIDQATAIGAGVIIASGMYIVLRESKS 283
>gi|229077893|ref|ZP_04210504.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock4-2]
gi|228705411|gb|EEL57786.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock4-2]
Length = 308
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 99/294 (33%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITVYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 183 ECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIVSGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLNEAFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|218662045|ref|ZP_03517975.1| hypothetical conserved membrane protein [Rhizobium etli IE4771]
Length = 460
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/275 (11%), Positives = 76/275 (27%), Gaps = 13/275 (4%)
Query: 35 ILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
++WG+T + + +E V + + R + + + K K V +
Sbjct: 1 MVWGLTWIAVKLGVETVPPMMFAATRFMVAGAVFIALAWARGQRKAFAKADQKRLVIVSL 60
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
L+ + + WG T S + + LG ++ A
Sbjct: 61 LMITLCYGPLFWGMQFVPSGTAAVLEMSLTPLALLAFGIALGEENWNHLRAFAMLLGAFG 120
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK------------TIPVGSSEGFFIEMC 201
+ L +G+ I + A+ G +
Sbjct: 121 LCLLFAPSIDLTGLEKGLPMIGLMAIAWAAISSAWGSVLAKPLISNYGSARLSGLTTLIG 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + +L + + I+ ++ + G
Sbjct: 181 GTVLMIASLAIEPRSAENLVTPWEWKAVAGWLFLVIFGSLLGYSIYMQLLRDIGPARAGS 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ +P + + V +P + R I ++V+A
Sbjct: 241 FAFVSPAIAVSVGVVFADEPAEPQRFIGMALMVLA 275
>gi|150377402|ref|YP_001313997.1| hypothetical protein Smed_5288 [Sinorhizobium medicae WSM419]
gi|150031949|gb|ABR64064.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 314
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 82/294 (27%), Gaps = 13/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T + L V I W + + L +V L + + R + I +
Sbjct: 27 MTTFLPALAVAGTVITWSFSFAAIGYALREVEPLPLAAIRFALAAVFAIAWIAWRR---- 82
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +A + T F P+ V L +FL
Sbjct: 83 --PRCFLPGDFFVLAISGLLGIATYNVLLNLGQATVSAGAAGFIVNTQPLFMVLLAVLFL 140
Query: 140 KERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
KER + I +L + ++ G + +A +A + +
Sbjct: 141 KERFSRWSWIGTVLGFSGVALIASGQPGGLSFGTGSTLIMLAAACAAAYSILQRPLFARA 200
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
E + V+ AL W + + + ++Y +K
Sbjct: 201 EPLDVTALVIVAGALALTPWLSAGISQVMRARPDTWLMVMFLAIGPGIIGQSCWTYALKS 260
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ G Y P + + +L + + + + +V+ +
Sbjct: 261 FGAARAGQFLYLVPPFSVGLAWLLLGEIPQPNTVLGGALALAGVVIVNSWGRRS 314
>gi|83589955|ref|YP_429964.1| hypothetical protein Moth_1107 [Moorella thermoacetica ATCC 39073]
gi|83572869|gb|ABC19421.1| Protein of unknown function DUF6, transmembrane [Moorella
thermoacetica ATCC 39073]
Length = 316
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 90/259 (34%), Gaps = 10/259 (3%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
+ ++L +++ R L + + +++ F L T+ + + + TIL +
Sbjct: 43 YAGGANILSILAIRFLAAGILFWGSLIVFPLDWKLNLGTMVRLTVLALGGQATTILLL-- 100
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
YA + +++ PVI L +VFLKE L +I A +L L I+
Sbjct: 101 ---FYAFERIPATVAMLFFYLYPVIVSLLATVFLKETLTRAKIGALVLAFTGLAIILGVP 157
Query: 166 GIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
L +A + +T + + E + Y + +G
Sbjct: 158 TGNLEIWGIVTALLAACTNGIYMVGQTGLLKTIEPRVFNAYATLTIGVAYFILAIVTGTF 217
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ + + ++ +K S I+ P++ V IL +
Sbjct: 218 SLAFNSQAILAIATLSLICTLLAYTAVAWSLKYIGASRAAIISTLEPVVTAVLGFLILGE 277
Query: 281 PIDTVRTIVFGIVVIAMVV 299
+ ++ + +++ + V
Sbjct: 278 RLHPIQLLGGALILAGVTV 296
Score = 43.4 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 9/98 (9%), Positives = 29/98 (29%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A + + L + + + Y +R + +
Sbjct: 57 FLAAGILFWGSLIVFPLDWKLNLGTMVRLTVLALGGQATTILLLFYAFERIPATVAMLFF 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y P+++ + + LK+ + + + + + L
Sbjct: 117 YLYPVIVSLLATVFLKETLTRAKIGALVLAFTGLAIIL 154
>gi|311696461|gb|ADP99334.1| membrane protein containing DUF6, transmembrane [marine bacterium
HP15]
Length = 322
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/312 (11%), Positives = 98/312 (31%), Gaps = 21/312 (6%)
Query: 14 LSKENASLPTM---MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFF 69
+S ENA + + + + + + W + + +E + L + R + +L +
Sbjct: 1 MSSENAGVLSRIPGLAYIGLVLTPLFWAGNAVVARGTVENIPPLSMSFWRWVIALAILLP 60
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
F + + ML + + A T + P+
Sbjct: 61 ----FGLPGIWRHRQVIRQRFGSMLALATFSVGAFNTLLYLAATTTTATNIALINATIPI 116
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMT-------------LHSGIPLLSLAIAV 176
L + L +R +Q + L I ++ + + +++ +
Sbjct: 117 FVALLAWILLGDRTRPIQALGIALAITGIVTVIARGDLSVLTSLQAQPGDLIMVAAVFSW 176
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
+ R+ +P+ + ++ + + L + + + F L L
Sbjct: 177 GLFSVLLRRQAVPLPALTFLTTQILLGTMVVLPFYLTDLIFFSGGFELSKTTAMPLLYFA 236
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ +++G+ + + I Y P+ + + L + + I +++
Sbjct: 237 IFPGILAYGFWNHGVHKIGPARAAIFMYLTPVFASILAGIFLAESLGLFHIIGAVLILAG 296
Query: 297 MVVYLLPTVINS 308
+V+ V +
Sbjct: 297 LVLATQTRVRTN 308
>gi|312883078|ref|ZP_07742809.1| Transporter, drug/metabolite exporter family protein [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309369238|gb|EFP96759.1| Transporter, drug/metabolite exporter family protein [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 278
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/276 (13%), Positives = 93/276 (33%), Gaps = 14/276 (5%)
Query: 30 VFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + + + +++ + VLE+++ R L S + + K
Sbjct: 1 MVLSALGFAMMSACVKYVSQFGIPVLEIVAARALVSFVISYVDV--------KRKGIPMW 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ L+ I + Y++ T + + PV + LG +FLKE+++
Sbjct: 53 GENKPFLLLRGVIGTLALMCVYYSVTTLPLAEATLLQYTHPVFTAILGLLFLKEKIHTST 112
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC----FARKTIPVGSSEGFFIEMCVL 203
++ +L ++ L ++ S P +L + A + + V ++
Sbjct: 113 MVCIILCLIGLGLIMQPSLDPNTALPLFSILMALIGALGSSVAYVIVRKLSQSEDSSVII 172
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + F F N T+ L+ G+ + ++ +
Sbjct: 173 MYFPLVALPISLFLVWSDFVWPNFNITILLLFVGIFTQIGQYGLTKSMQTQEAGKASGYS 232
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y + + V + + I G ++ V+
Sbjct: 233 YIQIIFSALIGVLVFNEIPSYWTYIGAGFIIAGAVI 268
Score = 39.1 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 36/82 (43%)
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ FL+ G++ + Y + L+ +++YT P+ + + LK+ I
Sbjct: 50 PMWGENKPFLLLRGVIGTLALMCVYYSVTTLPLAEATLLQYTHPVFTAILGLLFLKEKIH 109
Query: 284 TVRTIVFGIVVIAMVVYLLPTV 305
T + + +I + + + P++
Sbjct: 110 TSTMVCIILCLIGLGLIMQPSL 131
>gi|291279021|ref|YP_003495856.1| hypothetical protein DEFDS_0618 [Deferribacter desulfuricans SSM1]
gi|290753723|dbj|BAI80100.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 287
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 93/283 (32%), Gaps = 14/283 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + + W + +++ + + ++ R + + + + +
Sbjct: 3 YILLSLSALFWAGNFVIGKWVSTSIPPVALVFWRWVVAFLILLPFTLKKLIHQKDIIKDN 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ VF + + A+ P++ + K +
Sbjct: 63 LKL----LTVFGFLGVTLFNTLIYKAMHYTTAINALLINSFVPILIFIISFFLHKLKAKK 118
Query: 146 LQIIAALLIILSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
LQI+ A++ ++ + I+ H P L + S ++ + +
Sbjct: 119 LQILGAIISLIGVAIIITHGDLTSILKLKINPGDLLVLLAALSWALYSVLLKNLDNRLNP 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + L +++ + ++F L + L + F ++ GI+
Sbjct: 179 LVFLETIIFIGLIFLLPIYLASNKYFELNYKNIIVILYVGLFASVLAFICWNRGIREVGA 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G + P+ + SVF+L + T I +V +++
Sbjct: 239 NKGGNFVHLMPVFGTIMSVFLLGEHFYTYHIIAIVLVFSGILL 281
>gi|222153626|ref|YP_002562803.1| membrane protein [Streptococcus uberis 0140J]
gi|222114439|emb|CAR43249.1| putative membrane protein [Streptococcus uberis 0140J]
Length = 308
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 105/300 (35%), Gaps = 10/300 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G+L V A WG++ + Q+L V++ + S R++ + + +
Sbjct: 7 KGSLMVLVAGTAWGLSGVSGQYLMTHGVNLNLLTSLRLIIAGSILGLFTLIKQREKIRTL 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ K ++ FS L ++ ++ A+ + +++PV+ + SV K
Sbjct: 67 LSDK-KGVKQLIFFSLAGLLMNQFTYMNAIKYTNAGTATVLQYMSPVLILVAVSVVEKRL 125
Query: 143 LNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + ++ +L +L +I+ H L + SA + P+ G
Sbjct: 126 PSVAEALSIILAVLGTVIIATHGHLGSLAITPKGLFWGVLSAISAALYVLLPGPIVDKWG 185
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + L + + + +F G
Sbjct: 186 SMPVISLAMLFSGILFTLFTQPWQYDLPLTTGNGIALVGLVLVGTIIAYTLFVEGASIVG 245
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ P+ + S+ +L + ++ + ++++A+++ L + K + K
Sbjct: 246 PVKGSLIAAVEPIASVFFSIILLSETFYSMDILGMLLIMVAVLLISLRDFVFLKKQEHLK 305
>gi|229527926|ref|ZP_04417317.1| permease [Vibrio cholerae 12129(1)]
gi|229334288|gb|EEN99773.1| permease [Vibrio cholerae 12129(1)]
Length = 297
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 86/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQVSAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILGEPIGFNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|222086884|ref|YP_002545418.1| hypothetical protein Arad_3567 [Agrobacterium radiobacter K84]
gi|221724332|gb|ACM27488.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 323
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 89/281 (31%), Gaps = 13/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L ++W + T+ +S + +R L + + + G + L
Sbjct: 21 LAPLLTVLIWSGNTVVTKAAAGVISPGSISFYRWLLAFLILLPFV----GPAAWRNRALL 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + A + ++ A T + P++S L V ERL
Sbjct: 77 NQYWLKIATLGALGMVIYQSLAYEAAKTTSAVNMGVIVALMPLLSTLLAGVLAGERLTAT 136
Query: 147 QIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ ++ ++ L+ + L G + + V + + +
Sbjct: 137 TLAGGVISLIGLIYLTSHGDPATLLSGGFHIGDGLMIVAVLSNSLYGVMLKRWAMPLPMW 196
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ I ++ F G+ + + L L + + GI++ +
Sbjct: 197 QQLFWQIGFSTILLIPVFLMGDISPITSANLPLILYAAIPTSLVAPLCWMIGIQKLGAAR 256
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P+++ + +L + + I + +I + +
Sbjct: 257 TSLLINLLPIVVAALAWAVLGEQLHAYHAIGGALALIGVGI 297
Score = 38.0 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 30/107 (28%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I + L + + G + + L N L + K
Sbjct: 49 ISFYRWLLAFLILLPFVGPAAWRNRALLNQYWLKIATLGALGMVIYQSLAYEAAKTTSAV 108
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+G++ PLL + + + + + I +I ++
Sbjct: 109 NMGVIVALMPLLSTLLAGVLAGERLTATTLAGGVISLIGLIYLTSHG 155
>gi|254473518|ref|ZP_05086914.1| permease [Pseudovibrio sp. JE062]
gi|211957230|gb|EEA92434.1| permease [Pseudovibrio sp. JE062]
Length = 312
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 100/296 (33%), Gaps = 19/296 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGG 77
+S + G L + ++ T ++L + S L V R L + +
Sbjct: 12 SSDNVLHGVLLMMFGLLILSSTDGVVKYLSEFFSPLTVAFFRFAVQLAIILAIAPFQKRS 71
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L P +LAV F ++ L + +FV PVI V L +V
Sbjct: 72 WRSLLQETTLPLFCR-----GLLLAVGSVFIVFGLKYLPLTDATAIFFVQPVILVVLSAV 126
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKE++ + +A L+ +L++ ++ + +A+ FA + G
Sbjct: 127 FLKEKVGAKRWLAVLIGFTGVLVIMRPGTGVFQPASLLILAAAFTFACYLMLTRKLSGQA 186
Query: 198 IEMCVLA-------------IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
++ + I + + G T+FL+ G F
Sbjct: 187 SQLAIQFATGFAGSLFILPIIFYAWLTGFGGDLVIADQKADFTLPTIFLLCLGGTGLFAH 246
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ +RA S + + Y + + + D + G++V + ++
Sbjct: 247 VLLVKAFERAPASVLAPINYVEIISATTIGYLVFNEIPDKFVWVGVGMLVCSGLIL 302
>gi|269216569|ref|ZP_06160423.1| putative membrane protein [Slackia exigua ATCC 700122]
gi|269130098|gb|EEZ61180.1| putative membrane protein [Slackia exigua ATCC 700122]
Length = 312
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 90/294 (30%), Gaps = 17/294 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A +WG+ + + ++ + ++ R L++ + +
Sbjct: 14 LLLLVAAAVWGLGTVVLKDTVDALPPFWLVGIRFLFAGIILSAI-------FARRIARNL 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +F +L + +G LL ++ + V+ FL + R
Sbjct: 67 TTETLIASIFLGALLGLAYGANTSGLLYTTASKSTVITAMQCVVVPFLAWAISRTRPTLF 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFF 197
+IAA + I+ + ++L A+ A+ +
Sbjct: 127 NLIAAGMGIVGIAFVSLDGTEGFTIGLGEAITLLSALLFAVQVAFMAKLGDGRDAVVMTA 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ V I L V + + + G+
Sbjct: 187 VQFLVGGIACLAVGVCFEPLPDFTVLADPEVARNIAYIIVFASVLALTLENVGLAHVAAG 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ T + + ++ +L + + F +V +A+V+ +I ++
Sbjct: 247 PASLILATESVFGVGFAILLLGEALTRNILAGFVLVTLAIVLNETIPMIRRKRH 300
>gi|257466859|ref|ZP_05631170.1| hypothetical protein FgonA2_05415 [Fusobacterium gonidiaformans
ATCC 25563]
gi|315918007|ref|ZP_07914247.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691882|gb|EFS28717.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 297
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 87/298 (29%), Gaps = 18/298 (6%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F +WG T+ S +++ R L + +F + Y +
Sbjct: 8 ILLFMTAAIWGGGFPITKIALNYGTSPNAILAVRFLAASVILFAYLCYKKEKI------- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
V + +F+ L++ + F L +F V++ F +F ++
Sbjct: 61 -TRSEVKLGLFTGVFLSLGFSFQTVGLSYTTASKNAFLTGTYVVLTPFFAWLFTRKMPKK 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLS--------LAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L +L + +++ + A+ + K F
Sbjct: 120 QIYFSCFLSLLGIFLLSWSGENVSMQFGDVLSLLCAVFYAIQISYMSAKIGEKNPLHVNF 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+M I L Y + F + + + K + S
Sbjct: 180 FQMLSAGILTLIYNIVLEGGSVSSFPENKVQLFSVGFLVVFNTLLAYSAQTLAQKYVESS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V ++ T L S L + + + ++ +++ + S K K
Sbjct: 240 LVCLILSTEILFGAFISFLFLGEILSFQSLLGGFLMFLSIFLAEFDWKKKSDKESITK 297
>gi|242280995|ref|YP_002993124.1| hypothetical protein Desal_3539 [Desulfovibrio salexigens DSM 2638]
gi|242123889|gb|ACS81585.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
salexigens DSM 2638]
Length = 314
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/314 (9%), Positives = 86/314 (27%), Gaps = 18/314 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ G +F+ + W + + L + + R + + +
Sbjct: 1 MKWSEFKKTEKAGYIFIVLGILNWSGNFVAARGLAGTIDPATLNLLRWVLATLIFLPFGI 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L + V + ++++ A T + S ++P+++
Sbjct: 61 KAFMKERHLVA----RYWKELSVIALCGISLYDTLVFIAGATSEALNMSLISTMSPLLTA 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWS 179
+ FLKE+L + + ++ + L +
Sbjct: 117 LIAQFFLKEKLKPSMYAGIAVSTFGVALLVTDGSLEALLHMRLAKGDLLILCTAMMSAIY 176
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
+ + + + + W +
Sbjct: 177 NTVVNKVAGKISQTTLLMSCCLFGTLYIIPLYFWETGGQIVMPEFTYNLVVSLIYLSVFA 236
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ ++ S + YT P V + F++ +P++ + I++ ++
Sbjct: 237 SILCYLFWNMAVEAIGASKAALFYYTLPPASAVVAWFVIHEPVNMNQVFSGMIILAGIIF 296
Query: 300 YLLPTVINSGKNKT 313
L +N + K
Sbjct: 297 ALYGGSLNFMRRKA 310
>gi|209808907|ref|YP_002264445.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
gi|208010469|emb|CAQ80830.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
Length = 283
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/289 (17%), Positives = 118/289 (40%), Gaps = 9/289 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F A+++WG+ P+Y + + ++++R+ WS + + LL +
Sbjct: 4 FFGSLAFVIWGLVPIYFHQIGNIDPALILANRIFWSAAILMIILFIKPT---LLDRSQCT 60
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K + + + + + W F+YA S ++++TPV+ F+G +F KE + Q
Sbjct: 61 KKNITLATVAGVFMNLSWVGFVYATTINNIMAASLAFYITPVLVFFMGFMFFKETIKLPQ 120
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A +L++L+++ L L + + + +
Sbjct: 121 KMALVLMVLAIVAYVL------LDKQLPLLSLGISLFFASYIATKKLIKLNTFGGIFFEH 174
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + + H + D L+G L + S + + LS + +++Y P
Sbjct: 175 IVFAPLALWYIATHSSDITLMDWGTLMGTAPLQLIPILLLSVSLLKTPLSKISLLQYIEP 234
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ +V+I +PI + +V+++++V + T ++ K+ KS
Sbjct: 235 TFHLALAVWIYHEPISNGQKYALILVILSIMVSSIKTRKSTPKDAINKS 283
>gi|56697168|ref|YP_167532.1| hypothetical protein SPO2309 [Ruegeria pomeroyi DSS-3]
gi|56678905|gb|AAV95571.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 327
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 80/293 (27%), Gaps = 9/293 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ F+ A + + + + L + V+ + R ++
Sbjct: 43 QMTATARQAIGFMVLAILCFSLMDASVKALAPRIGVIPALWARYAGQ-------MLLVLL 95
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + + +L GFF + + V PV +
Sbjct: 96 LVLPRLRRVMRTAYPRLQLLRSLMLMCATGFFFLGISRIPLTDATALMSVNPVFITLGAA 155
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+FL ERL +++ L + LI+ A+ +A C++ +
Sbjct: 156 LFLGERLGPRRLLGIALALTGALIVLRPGSDLFQPAALYPLGAATCYSTYALLTRRVGPD 215
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L L H+ + L + + +
Sbjct: 216 EDVWTSLFYTGLVGTAVLSLIVPTHWQPPGPTAWGLIALVALFGTLGQLCLIRAFSQGEA 275
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + Y + S + D + +V+ +Y+ ++S
Sbjct: 276 AMLAPYAYCGLGFAAIWSALFFGEYPDLWTILG-ALVIAGAGLYVWHREMHSR 327
>gi|297579776|ref|ZP_06941703.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297535422|gb|EFH74256.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 297
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 86/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIATHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQVSAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILDEPIGLNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|299065898|emb|CBJ37078.1| conserved membrane protein of unknown function, DUF6, putative
transporter [Ralstonia solanacearum CMR15]
Length = 310
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/280 (9%), Positives = 75/280 (26%), Gaps = 14/280 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ LWG + L+ + + +I+ RV + + + G +L
Sbjct: 9 LLILAALWGGSFLFMRVAAPPFGPVALIALRVAIASAFLLPVLATRGGLGALRAHWPHLL 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ L + LT TS P+ + + +L ER++ ++
Sbjct: 69 AVGVLNSAIPFCLFAYAE------LTLTAGFTSVLNAAAPLFAAIVAFAWLGERMSAWRM 122
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS-------EGFFIEMC 201
+ + + ++++ S +A GS
Sbjct: 123 LGLAIGFVGVIVLVGGSSALDARQGGLAVAAALGATVLYGLAGSYAKRYLTGVPPLAVAT 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
I A + + + +F + +
Sbjct: 183 GSQIAAAVVLAPLAVWLWPAHTPTGSVWFHVIGLGIACTGIAYILFFRLLAHVGPTRAVS 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + P+ ++ + L + + ++++ +
Sbjct: 243 VTFLIPVFGVLWGILFLGEQLTLNMVAGCAVILLGTSLST 282
>gi|292656109|ref|YP_003536006.1| putative integral membrane protein [Haloferax volcanii DS2]
gi|291371180|gb|ADE03407.1| putative integral membrane protein (TBD) [Haloferax volcanii DS2]
Length = 325
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/301 (9%), Positives = 87/301 (28%), Gaps = 9/301 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N + +LWG + + + L+ + + + R + +F + +
Sbjct: 4 NTQTNRTLALFATI--AVLWGTSFMAIEVGLDALPPVLFAALRYDVAGVVLFGYGLLAAE 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
VG + ++ + Y + S + +TP+ + +
Sbjct: 62 DWRPRGRDEWLVVFVGGALLIGAHFSLLFSGQRYVTSGVSAIVISLAPVLTPLFAWPMLP 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L ++ L + + + + G L + + +A +
Sbjct: 122 EERLDAFGFLGVLLGLAGTVVIALASGSVGGQLFGVLLLFLAAAAWAFGSVLVKRLPGNP 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFF------LGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + S + L L ++ F +
Sbjct: 182 PVVPMQSWMMLIGAAMLHVTSPVLGEPGLASVAWTPVVVAALLFLAVLCSAVGFIAYFVL 241
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ R + ++ Y P++ V+ L + + V F +++ + G+
Sbjct: 242 LDRIGAVEISLVNYVTPVVAAVTGWAFLGERLGPVTVAGFALILAGFAFMKRDALGPLGR 301
Query: 311 N 311
Sbjct: 302 R 302
>gi|254975080|ref|ZP_05271552.1| hypothetical protein CdifQC_07190 [Clostridium difficile QCD-66c26]
gi|255092469|ref|ZP_05321947.1| hypothetical protein CdifC_07392 [Clostridium difficile CIP 107932]
gi|255314208|ref|ZP_05355791.1| hypothetical protein CdifQCD-7_07645 [Clostridium difficile
QCD-76w55]
gi|255516886|ref|ZP_05384562.1| hypothetical protein CdifQCD-_07219 [Clostridium difficile
QCD-97b34]
gi|255649987|ref|ZP_05396889.1| hypothetical protein CdifQCD_07359 [Clostridium difficile
QCD-37x79]
Length = 314
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 15/307 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV 72
KE A L G + + I+WG + TQF ++ L++I+ R + +
Sbjct: 5 KKEGALLKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFF 64
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + L + + L+ +F VI
Sbjct: 65 -------KQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVP 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTI 188
F+G + + +L+ + II++L+ ++ + I++L + + I A+ +
Sbjct: 118 FIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSE 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L VV F+G + + F +
Sbjct: 178 FAKDNNPMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQT 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
KR + I+ T + + S+ ILK+ I I ++ + + T ++
Sbjct: 238 ICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLIIGSILIF--VAIITAETKLSF 295
Query: 309 GKNKTKK 315
K+K K
Sbjct: 296 LKSKKVK 302
>gi|190890077|ref|YP_001976619.1| permease [Rhizobium etli CIAT 652]
gi|190695356|gb|ACE89441.1| putative permease protein [Rhizobium etli CIAT 652]
Length = 304
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 75/285 (26%), Gaps = 5/285 (1%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
LWG + + + +E + + +I+ R L + + + + L +
Sbjct: 20 ATLWGSSYTFIKIGVETIPPVTLIAARTLIAGAILLAVLRHRRVRLPRDPAIWRRFFVQA 79
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + W ++ F + V R +
Sbjct: 80 CLNSVIPFTLIAWAEQSVDAGLAVILNSATPIFTFLLTVVMTRHEPATLRKLFGVVAGLA 139
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
I L + + L L +A+ + C+A I + +G + V+
Sbjct: 140 GICLVIGVEALGGLGESLIAQLAIILATICYAGAAIFSKNFKGLDPAVPAAGSLISGAVI 199
Query: 213 WNGFS----GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
S L + F I+ ++ Y
Sbjct: 200 LMPVSLLVDRPWTLDPSAESMLALLALSAFSTALAFAIYFRLVQTLGSVGTTSQAYLRVP 259
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + + L + + I V++ ++ +P +
Sbjct: 260 IGVAIGIVFLGERLSPTAWIGLICVILGVIAMTIPARRTTQARSA 304
>gi|169795112|ref|YP_001712905.1| chloramphenicol-sensitive protein [Acinetobacter baumannii AYE]
gi|213158226|ref|YP_002320277.1| RarD protein [Acinetobacter baumannii AB0057]
gi|215482660|ref|YP_002324856.1| hypothetical protein ABBFA_000944 [Acinetobacter baumannii
AB307-0294]
gi|301345202|ref|ZP_07225943.1| permease [Acinetobacter baumannii AB056]
gi|301510960|ref|ZP_07236197.1| permease [Acinetobacter baumannii AB058]
gi|301594563|ref|ZP_07239571.1| permease [Acinetobacter baumannii AB059]
gi|332854008|ref|ZP_08435124.1| protein RarD [Acinetobacter baumannii 6013150]
gi|332869712|ref|ZP_08438900.1| protein RarD [Acinetobacter baumannii 6013113]
gi|169148039|emb|CAM85902.1| chloramphenicol-sensitive protein [Acinetobacter baumannii AYE]
gi|213057386|gb|ACJ42288.1| RarD protein [Acinetobacter baumannii AB0057]
gi|213986286|gb|ACJ56585.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332728290|gb|EGJ59672.1| protein RarD [Acinetobacter baumannii 6013150]
gi|332732614|gb|EGJ63847.1| protein RarD [Acinetobacter baumannii 6013113]
Length = 314
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/294 (19%), Positives = 122/294 (41%), Gaps = 5/294 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSL 80
+ G + A + +G+ YTQ L Q+ + R++ +LP + + + S ++
Sbjct: 2 LKGVILSVMASLTFGVLYFYTQLLGQLDSEQTFGWRIIATLPFLTLFMWWSGDLSHIKNI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV
Sbjct: 62 YQRILAKPSLLLLLITTSVLTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q +A +L I+ + G A+ + F + + G F
Sbjct: 122 EKISKFQWVAIVLAIIGVGHEIFRLGSIAWETALVAIGYSAYFLLRKKIKTDNLGGFWWD 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +P Y+ G FL L + G G+L++ + + L G
Sbjct: 182 LLIIMPVAIYLTHTGLL-PYSKFLDQPTLGLVIAGLGVLSAIGLGCYILASRYLPLVVFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P+L+ ++ +L + I + + A+ V +L + + + K
Sbjct: 241 LLGYLEPVLLALA-SLVLGESIGKEEWFTYLPIWCAVFVLVLEGAFHLYQQQQK 293
>gi|119471114|ref|ZP_01613646.1| transporter, drug/metabolite exporter family protein
[Alteromonadales bacterium TW-7]
gi|119445770|gb|EAW27052.1| transporter, drug/metabolite exporter family protein
[Alteromonadales bacterium TW-7]
Length = 294
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 82/289 (28%), Gaps = 1/289 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +F +WG + L+ + + +I RV ++ + +Y L+ K
Sbjct: 6 LLRLFFLAAIWGASFLFMRMAATSLGPAVLIEFRVGFAALTLVIVALYLKRRLAFTKHKK 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L + I A T+ + I +
Sbjct: 66 HFFIIGALNSALPFLLFAYAAQTISASTLSILNSTTPIWGAVVGIIWSKTKPTKSMVIGL 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L + + I++ + L++ + +A Y A F
Sbjct: 126 LLGLVGVAILVGQNHLILNTQSLIAIVAALSASFCYAIASHYTKNAPKLAPFDNAHGSMW 185
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A F V+ L + + + +F I+ ++ + +
Sbjct: 186 AASFMVLPLILFMPMREAPTTNVMLGVLALGVVCTALAYILFFKLIEDIGPTSALTVTFL 245
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
PL I IL + I + V++ ++ KT+
Sbjct: 246 IPLFGIFWGHLILDEQIGPNTLLGALFVIVGTMLVTGFLPRKKHLAKTR 294
>gi|295394514|ref|ZP_06804737.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294972693|gb|EFG48545.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Brevibacterium mcbrellneri ATCC 49030]
Length = 360
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/312 (10%), Positives = 91/312 (29%), Gaps = 21/312 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVL-WSLPGVFFAIVYFS 75
+ PT+ G + + + + + + + S V R+ S+ + A+
Sbjct: 2 TTRPTLWGFILTLISVVAFALAAPIAKTMYASDWSAGGVTFARLTGCSVLLMVPALWAMR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G LK G++ + L A+ + + P++ V
Sbjct: 62 GKWHNLKGNYMRVIMYGVITMAGVQLLF-----FLAVERLKPSIALLLEMTAPILIVLFL 116
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + ++ ++ + ++I+ G L L + +A + +
Sbjct: 117 WIRTRVNPAIATLVGMVVAMAGVVIVLDPRGATLDMLGVLYALAAAGCLATFFVMSARSD 176
Query: 196 FFIEMCVLAIPALF-------------YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
I L + V + IP ++ +
Sbjct: 177 MGISPVPLLAFGMGVGAIVVGIVCAVGLVPFKVAYDPVTVAHFTIPWWAGVLAIVAVTIL 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ G++ + + +V+S ++L V+ +V+ +V L
Sbjct: 237 AYVTGVIGLQLIGATVGSFLNLLEVPASVVASWWMLGDLPTYVQLCGGIVVLAGVVFVKL 296
Query: 303 PTVINSGKNKTK 314
+ + + +
Sbjct: 297 GENQQTKRERVR 308
>gi|312114135|ref|YP_004011731.1| hypothetical protein Rvan_1373 [Rhodomicrobium vannielii ATCC
17100]
gi|311219264|gb|ADP70632.1| protein of unknown function DUF6 transmembrane [Rhodomicrobium
vannielii ATCC 17100]
Length = 295
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 93/289 (32%), Gaps = 4/289 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S + G L F A+ + ++ + + + ++ + + A + +
Sbjct: 2 SSDQHLRGVLIAFLAFFAYAVSDASVKAIAGA----IPAYESAFLGTLIGLAALPLALAK 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ I A F+ P + + L VF
Sbjct: 58 GEGFFDMVRTTNRPLWFVRFVSSALSSVGAIVAFTHLSMAEAFVLIFLMPSLIIVLSVVF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKER+ + A L+ +LI+ L + A A + + +
Sbjct: 118 LKERVGVRRWSAVLIGFAGVLIVLRPGFRELTVGHLGAFICALGAAVSVVILRAMGPKET 177
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L +V G + F + + + L YGLL + + + A S
Sbjct: 178 NASLFGAGMLGAIVLCGLASIPTFQMPTRIEWVLLASYGLLAAVASVLLIHATAEAPASL 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
VG +Y+ + ++ +D ++V + ++ L+
Sbjct: 238 VGTTQYSQMIWAVLFGYLFFGDDVDAPMAAGIALIVGSGMLTLMREKKR 286
>gi|256843934|ref|ZP_05549421.1| permease [Lactobacillus crispatus 125-2-CHN]
gi|256849504|ref|ZP_05554936.1| permease [Lactobacillus crispatus MV-1A-US]
gi|293381365|ref|ZP_06627366.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|256613839|gb|EEU19041.1| permease [Lactobacillus crispatus 125-2-CHN]
gi|256713620|gb|EEU28609.1| permease [Lactobacillus crispatus MV-1A-US]
gi|290922055|gb|EFD99056.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
Length = 302
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 97/300 (32%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G WG + +FL V+ ++ R+L+S + +
Sbjct: 2 NQRYKGLTLAVVGACFWGASGTAVEFLFSSTNVNTAWLVGLRLLFSGALLMIYACWKYLD 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + +++F+ + + A+ + F+ PV + S+
Sbjct: 62 QVKAMLHDK-KVIIMLIIFAFLGMGSSQLSYFVAVKYSNAPTATVIQFLAPVFIIIYSSL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K + I+ ++ ++ I+ L+L+ + A G
Sbjct: 121 RSKMWPRRIDAISIVVAVVGTFILATGGRFDQLALSPLACFWGLIAAFSEAINTVLPGKL 180
Query: 198 ------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I + A+ + L + + + + ++ +
Sbjct: 181 FKKYGPIPVIGAAMLVAGIAFLPIYFTQPMPKLAPVDVWVIVYIIIGGTLLAYTMYLSSV 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + STVG++ PL+ + SV +L + + ++++A + L+P+ KN
Sbjct: 241 QYIEPSTVGMLGALEPLIATILSVSLLHADFGPMDMLGGFLIIVATFMQLMPSRNPIKKN 300
>gi|229131516|ref|ZP_04260407.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST196]
gi|228651963|gb|EEL07909.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST196]
Length = 310
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 102/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNKSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGVFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWRHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARK 186
+ K+ +QI+A + + + + I + L+ A+ ++ Y
Sbjct: 121 AFEQKKFPASMQILAIITALTGTYFIITNGSIENIVLSKAAITFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTTIVIGWGMLIGGIALLICNRSFGWNQISQTFTLQTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|226313920|ref|YP_002773816.1| hypothetical protein BBR47_43350 [Brevibacillus brevis NBRC 100599]
gi|226096870|dbj|BAH45312.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 300
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 13/285 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ +LW + L+ S + R L + ++F L LKD
Sbjct: 14 AISILLWASAFAGIRVGLQAYSPEHLSLLRFLIGSLFLGILTLFFRIRLPELKDVPAILL 73
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
AV+ Y ++ + S TP+ S L +F +E
Sbjct: 74 L------GGLGFAVYHTALNYGEMSVSAGVASLLVTTTPIFSALLALLFFREHFGVRGWF 127
Query: 150 AALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
AL+ L + I T+ +G L +A + + FA + V L
Sbjct: 128 GALISFLGVAICTIGTGETLQITDGIFLILLAASSESIYFAFQKPLVEKYGVLAFTAYTL 187
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + G + + + +Y S
Sbjct: 188 WAGTFCMLFFLPGLGTAIAQAPWDVTLSVVYLGIFPSVVAYLSLAYVTSVVGTSEATTSL 247
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P+L + + +L + V + ++ +++ + ++
Sbjct: 248 YMTPVLAFLIAWVLLGEGPTLVTMAGGVVTLVGVLLATMKPRLSR 292
>gi|84387135|ref|ZP_00990157.1| hypothetical protein V12B01_04248 [Vibrio splendidus 12B01]
gi|84377996|gb|EAP94857.1| hypothetical protein V12B01_04248 [Vibrio splendidus 12B01]
Length = 310
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 103/292 (35%), Gaps = 9/292 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
TM G + L+ I ++ + L +++ R L + + AI S
Sbjct: 21 STMKGITLALISTALFTIVGVFVRQLSTDYDTFQILFFRQLIFMLLLMPAI-------SK 73
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L PK + + + F ++ + F+ + + L
Sbjct: 74 NIGVLLKPKKISLHLLRILGAFTALYFGFISVSNIPFADATALGFLQVLFVALIAHFVLA 133
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ +I ++ + ++ + ++ +A + + V +
Sbjct: 134 EQITRSRIFTIVVGFIGVMTVVRPTFAASHSLYVLSGVIAALGASVAVVCVRKVAQSEPK 193
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++A AL + + + D + L+ G+++SF + K A+ + +
Sbjct: 194 ITLMAYQALAIGLMTLIPTLYLWRTPTVEDFMLLLLVGIISSFAQYVGISAYKWAQANII 253
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+EY + ++ + + + D I I++I+ ++ L+ + + K
Sbjct: 254 ANVEYVKIIYSLIIGLVVFSEIPDLWSMIGALIILISALIPLIWSHYQTTKE 305
>gi|84386566|ref|ZP_00989593.1| Transporter, Drug/Metabolite Exporter family [Vibrio splendidus
12B01]
gi|84378671|gb|EAP95527.1| Transporter, Drug/Metabolite Exporter family [Vibrio splendidus
12B01]
Length = 331
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 111/306 (36%), Gaps = 20/306 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
+ T +G +WG+T + ++ L V + ++ R + ++ G+ +
Sbjct: 1 MNTTNRDTFLGWTAAIAVACIWGVTGVVSKPLSMAVDPMTLVFFRYVTAVIGLSIIFFFT 60
Query: 75 SGGLSLLKDTLKN-----PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
S +L D + + + V F +L + P
Sbjct: 61 SRSKNLSADLGSSLKIDTKDIGRIALCGIVGQGVFSLFNFLSLSHIGATENGVIQGMQPF 120
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVT 177
+VF G +F+ R+N +Q A + + + M++ + + +A+
Sbjct: 121 ATVFFGMMFMNFRMNKVQWGAFIASAVCIYAMSVGPTNTIEGGTPLLGYVYVTCSMLALA 180
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF--SGGEHFFLGNIPDTLFLIG 235
W+A+ A GS + +A+ + V+ G S F + L +
Sbjct: 181 WTAHLRASLADKYGSVVSMLYQYISVAVMGIIVVLTMGLDLSQIYIIFSSPLLIALLIFL 240
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
++ + I Y KR + + PL+ + +V L + + +TIV ++V+
Sbjct: 241 GTGISGGSYLIQLYSFKRIGVEKATMALNLMPLVGYLVAVVTLGEQMAMGKTIVVSLIVV 300
Query: 296 AMVVYL 301
A+ V+
Sbjct: 301 ALYVFT 306
>gi|107027649|ref|YP_625160.1| rarD protein [Burkholderia cenocepacia AU 1054]
gi|116693640|ref|YP_839173.1| transporter DMT superfamily protein [Burkholderia cenocepacia
HI2424]
gi|105897023|gb|ABF80187.1| rarD protein [Burkholderia cenocepacia AU 1054]
gi|116651640|gb|ABK12280.1| RarD protein, DMT superfamily transporter [Burkholderia cenocepacia
HI2424]
Length = 299
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 111/293 (37%), Gaps = 6/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G A L+ + Y + L ++ L++ + R++W+ PG I +L+
Sbjct: 9 RGLTLSVMASTLFALMSAYAKLLAPLTGLDIFAWRIVWTAPGALALIALRGRWPALVELA 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ + + L SA +L V F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSARDWRLLIALPASAALLGVQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L + + + F + S F
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAVEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + + L G G+L++ + + ++ GI
Sbjct: 189 VLL---CPIAFAMVATSATQVAGQPLLWAALLPGLGILSTLALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++V S+ +L + + + +G + +A+ + + + + +
Sbjct: 246 LGYVEPVLLVVVSLLLLGETLSVAQLATYGPIWVAVALTAWRSAMLMRRLPAR 298
>gi|310827715|ref|YP_003960072.1| hypothetical protein ELI_2126 [Eubacterium limosum KIST612]
gi|308739449|gb|ADO37109.1| hypothetical protein ELI_2126 [Eubacterium limosum KIST612]
Length = 303
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/300 (10%), Positives = 82/300 (27%), Gaps = 14/300 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF-----SGGLSL 80
+ + A ++WG + + + R L + +
Sbjct: 8 IIVLAIATLIWGTSLVAQSIGTNYYGPFTFNAARFLIGAIVLIPFTLLINYHKNKKETRN 67
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L N K V + I+ + F ++ V L +
Sbjct: 68 LFYKASNKKLVQGGIICGVIIFFTATLQQIGIAYTTAGKAGFIT-ALYIVIVPLLRIRSG 126
Query: 141 ERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ + I+ + ++ L+ + ++ +
Sbjct: 127 KKFPLRIWLCIFFAIIGMSLLCLNEKFVFEFGDTFILCCALFTGIHILLIDYYSSYVDCV 186
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + V + + + L + + + G K
Sbjct: 187 KLSCLQFLVCGVVSTVIALIVERPNLQVMSEGGASILYTGIFSCGVAYTLQAIGQKSVPP 246
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++ + ++ FIL + + T+ +++ A+++ +P S + K KKS
Sbjct: 247 IAASLILSLESVFSALTGWFILGETLSFKETVGCLLMLGAIIISQIPM---SKRKKIKKS 303
>gi|300697294|ref|YP_003747955.1| tonb box harboring transmembrane protein, multidrug resistance
efflux transporter domain [Ralstonia solanacearum
CFBP2957]
gi|299074018|emb|CBJ53555.1| putative tonb box harboring transmembrane protein, multidrug
resistance efflux transporter domain [Ralstonia
solanacearum CFBP2957]
Length = 298
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 81/288 (28%), Gaps = 9/288 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G LF+ A + G T + ++ + + + R +LP +F ++
Sbjct: 2 SNRTIGYLFLSLAMMTVGSTVIASKLIAGSLPPFPATALRFAVALPFLFALVLLRGERWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +++ + + I L P +S V L
Sbjct: 62 SLSG----RAWGLLILQAGAGSVGYTTLLISGLAYLPAADAGVVIGTLPAVSALFSVVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP----LLSLAIAVTWSAYCFARKTIPVGSSEG 195
ER +++ LL + ++ + + + F +
Sbjct: 118 GERPKLRLMVSVLLATVGVMAVAWTGSGSASLLGVLFILGAVVCESAFILLNKRMPVPLP 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + L + + + + F ++ G R
Sbjct: 178 PLLQATAMTGLGLLVSLPFAVLDFPSTVPSSAAIAAVVWYALVPTVGGFLLWYAGAARVS 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S APL + + L + I + V++A++ L
Sbjct: 238 GSEAATFTAVAPLTAVALAALFLHERIGATQAFGVVAVILAILTLTLS 285
>gi|307635076|gb|ADI85429.2| membrane protein, putative [Geobacter sulfurreducens KN400]
Length = 302
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 83/267 (31%), Gaps = 11/267 (4%)
Query: 37 WGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+G ++ + F S V+ R L + + + + ++
Sbjct: 36 FGALGIFGKVAFASGASTAVVLFLRFLVAGVLMAALMPVLRLSWP------RGRDFWILV 89
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
A + +L LT+ ++ P + + ++RL L++ A
Sbjct: 90 GMGAIGYVGQAFCYFTSLRYASAGLTALLLYLYPALVTLASAALGRQRLTPLKVAAVAAS 149
Query: 155 ILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
++ +L+ L + ++ + V G V+ + A
Sbjct: 150 LVGILLTVADGLTGSLSGIAFGAGAAVIYTGYILVGEQVSRRTGAIPAATVIMLAAATVY 209
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
G H+ G + F G++R + + P++ +
Sbjct: 210 GCAVIWQGPHWPTGLAGWGAVVGIALFSTVVAMVGFFAGMQRLGAADAATLSTLEPVVTL 269
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMV 298
V + IL + + V+ +V+ A+V
Sbjct: 270 VLAALILGESLGGVQLAGAALVLGAVV 296
>gi|265985472|ref|ZP_06098207.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839688|ref|ZP_07472491.1| protein of unknown function DUF6 transmembrane [Brucella sp. NF
2653]
gi|264664064|gb|EEZ34325.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405268|gb|EFM61544.1| protein of unknown function DUF6 transmembrane [Brucella sp. NF
2653]
Length = 299
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 31 FCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
A ++ +++L S + + R V + G
Sbjct: 14 LLAVTIFATQDGISKYLGSHYSPIFITMIRYWVFAAFVVLLALRSGGIAKAAATK----- 68
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F +LA FI+ L + + P++ L FL E++ +
Sbjct: 69 RPLLQIFRGLLLATEIVTFIFGLSRAGMAMAQSIFQGAPLLVTMLSVPFLGEKVGWRRWT 128
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
A + + +L++ + + + FA + + M +
Sbjct: 129 AIITGLCGVLLIINPINAHFDANMLFPVAATTMFAVYVVATRAVSKSDSAMTSFFYTGIG 188
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
VV G H D ++ + + V + Y ++
Sbjct: 189 GVVVLTIVGMFHITPIAPYDWPWMAALCVCGIASHYFLIRAYDILEAGEVQPLTYFQLVI 248
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ I + + IVV A + +L + ++K
Sbjct: 249 GAFIATLIFHEKLTWNIVAGAFIVVGAGLFAMLRERWLALEHK 291
>gi|262038900|ref|ZP_06012244.1| putative transport protein [Leptotrichia goodfellowii F0264]
gi|261747065|gb|EEY34560.1| putative transport protein [Leptotrichia goodfellowii F0264]
Length = 296
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 93/283 (32%), Gaps = 13/283 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
L F W ++ ++T+ E + R ++ + +V L
Sbjct: 10 NNRKAELLAFITVFFWAVSVVFTKVGTEYYDSTTLAVLRYSFAFLMLVIFMVVKKIKLPK 69
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LKD + +A H F + T +S TP+ + L +FLK
Sbjct: 70 LKD------FPMFFLAGGVGIAFHMITFNKGVSTLSSATSSILLACTPIFTSVLSVIFLK 123
Query: 141 ERLNHLQIIAALLIILSLLIM-----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
E++N I+ + ++++ + + +A A + G
Sbjct: 124 EKINLYCWISIFISFSGIIVLTLWEGVFSFNEGIFWMLLAAFLLAVYNIMQKSFSDKYSG 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ ++ A+ +V++ S E + ++ L + + ++ A
Sbjct: 184 TEATIYSISAGAIVLMVYSPGSLREIPKMNINQFSVIFFMAFLATVVAYICWGKALEMAD 243
Query: 256 -LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + P + ++ + L + + + +++I +
Sbjct: 244 SAGEIANFMFLGPFISTLTGIIFLNEKLMLSTIVGGILILIGI 286
>gi|116621593|ref|YP_823749.1| hypothetical protein Acid_2475 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224755|gb|ABJ83464.1| protein of unknown function DUF6, transmembrane [Candidatus
Solibacter usitatus Ellin6076]
Length = 294
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 88/299 (29%), Gaps = 11/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + + L +S L ++ R + +
Sbjct: 1 MNRRKADLALLFNAFIWGSTFILVKSSLSYISPLLFLAIRFSLATAALGLLFRGTWKWRR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
P +G + L + L ++F + V+ LG++
Sbjct: 61 R-----ATPAMIGAGCLAGVFLFAGYALQTIGLRLTTAPKSAFLTGLATVMVPLLGALVY 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ R ++ L+ + +MT+ G L A
Sbjct: 116 RIRPQLSEVFGVLIATFGMALMTIEGPIDSIGRGDLLTLGGAIAFAAHIVTLGHYSEKIG 175
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + A+ + ++ F + LI + F I ++ +
Sbjct: 176 YELLSITQVGAAAVSSLTMFWWAETPRFHWNPVVLWAILITGLFCTALAFTIQAWAQRYT 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ ++ P++ +S ++ + + G+++ +++ + +
Sbjct: 236 TATRTALIYALEPVVAWTTSFLVVGEGLSGRAAAGAGLILGGVLLVEMKPLKPREHQSR 294
>gi|119947293|ref|YP_944973.1| transporter DMT superfamily protein [Psychromonas ingrahamii 37]
gi|119865897|gb|ABM05374.1| RarD protein, DMT superfamily transporter [Psychromonas ingrahamii
37]
Length = 296
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 116/283 (40%), Gaps = 3/283 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F A+++WG+TP++ + ++ E+ ++R++WS + + F+G LK +
Sbjct: 5 FFAILAFVVWGLTPVFFHYFPANNMAELWAYRIIWSF-TLVVLWLKFTGVKVDLKKLWND 63
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
++ + S I+ + W F+YAL S +YF+ P+++ KE+ +++Q
Sbjct: 64 KRSFLAISISGVIMNISWYGFVYALSNNYVLDASMAYFIAPILTAGFSWFLFKEKTDNIQ 123
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
++ LL+ +L+ + + G+ + A A K + S+ ++ +PA
Sbjct: 124 RLSLLLMCGALIYLAISQGVAPSLSLVIAVSFAAYMALKKLSKFSNNENLYIENLIQLPA 183
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
V S L + + I L + + +Y P
Sbjct: 184 ALITVVVIASSHNPSQPDPAYYVLLGAVFLQIIPVFLLS--AAISNVNLQKIVVYQYVEP 241
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L + +VF+ + +D IV IA+ ++L S K
Sbjct: 242 TLHFLLAVFVYHEGLDKPLFNTLIIVWIAIAMWLGNEKKKSSK 284
>gi|30018768|ref|NP_830399.1| drug/metabolite exporter family protein [Bacillus cereus ATCC
14579]
gi|228937818|ref|ZP_04100448.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228957000|ref|ZP_04118775.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228970699|ref|ZP_04131341.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228977276|ref|ZP_04137672.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
Bt407]
gi|229042439|ref|ZP_04190185.1| Transporter, drug/metabolite exporter [Bacillus cereus AH676]
gi|229126013|ref|ZP_04255036.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-Cer4]
gi|29894309|gb|AAP07600.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
gi|228657438|gb|EEL13253.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-Cer4]
gi|228726893|gb|EEL78104.1| Transporter, drug/metabolite exporter [Bacillus cereus AH676]
gi|228782415|gb|EEM30597.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
Bt407]
gi|228789001|gb|EEM36938.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228802631|gb|EEM49473.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228821853|gb|EEM67851.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326938299|gb|AEA14195.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 308
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 100/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 183 ECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 296
>gi|310829229|ref|YP_003961586.1| hypothetical protein ELI_3667 [Eubacterium limosum KIST612]
gi|308740963|gb|ADO38623.1| hypothetical protein ELI_3667 [Eubacterium limosum KIST612]
Length = 299
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 96/291 (32%), Gaps = 2/291 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVL--EVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + +G L+T+ L +SV ++ R L + + + K
Sbjct: 3 KGIVISVIGAAAYGFISLFTKNLVNLSVTSDTILVSRFLIIFLVIGLYLAARKKLVKPTK 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+++ G++ + I + + + S+ FV + VF +
Sbjct: 63 KQIRDLLIYGVIGYGGAIFLLAESYIFMPMSQATMIHFSYPLFVAFFMVVFYKEKITWVK 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ L + + L T++ L++L + Y + + + + +
Sbjct: 123 ASALVLTCLGIAFLMEFNCTVNLVGLLIALLSGAAFGLYMVSVSESSIKDLDPLNLLFYL 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L + G H + ++G L+ + I+ + ++
Sbjct: 183 ALVVVLVFGTLGIIKGELHLVGLGSAVYVSMLGVAALSIIGIGFSTVAIRTIGPTYAAMI 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P++ ++ V I ++P+ + ++ +++ + K++
Sbjct: 243 CVLEPVVALLCGVGIFREPLTAYGFLGSLMMFAVILLIAFEGYLRKKKSER 293
>gi|261221825|ref|ZP_05936106.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997790|ref|ZP_06110347.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920409|gb|EEX87062.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552258|gb|EEZ08248.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 319
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 14/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 16 MNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWRG 70
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 71 QLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAILH 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 131 EVVRFYRWSAVLIGLFGVMIIIWPRLPLFSAGSVGRDEAVGALAALGAAVMSAVAMMLVR 190
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ ++ V S + + N L+G G + +
Sbjct: 191 RLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTECY 250
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 251 RHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 303
>gi|116332938|ref|YP_794465.1| DMT family permease [Lactobacillus brevis ATCC 367]
gi|116098285|gb|ABJ63434.1| permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus brevis ATCC 367]
Length = 310
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/309 (13%), Positives = 94/309 (30%), Gaps = 13/309 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ G L A +LWGI+ + L V+ L + R++ + +
Sbjct: 2 TRQHHLRGVLLASIACMLWGISGVAASTLFTLNHHVTALWLTQIRMISAGAILLIWGQLI 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + ++ + L + A+ + + F+ P I
Sbjct: 62 --HAQPFQIWRQRATGLRVISYGLLGLVPVQLCYFEAVKFGNAPIATIIQFLGPFIISIY 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKT 187
+F + I ++ + L++ H +L
Sbjct: 120 YFLFKHMTPTRPEGIGMVMAFVGTLLIVTHGHLTSLAISPVVLIWGGLSAIGVATNTLIP 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
P+ G A + G H L L L+ F +F
Sbjct: 180 RPLLPKFGAMAVTGWGLFVAGICLNVFGPLWRVHVTLTAAEWGLVLLIIIFGTVIPFLMF 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + +T +++ PL V SV L + T + ++++A++V L
Sbjct: 240 AHALGYILPTTASLLDAFEPLSATVFSVIFLNVQLTTFDLVGGALIILAVMVLSLNGRKM 299
Query: 308 SGKNKTKKS 316
+ +++
Sbjct: 300 MNFFRRRRA 308
>gi|15602326|ref|NP_245398.1| hypothetical protein PM0461 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720717|gb|AAK02545.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 286
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/274 (12%), Positives = 81/274 (29%), Gaps = 9/274 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+L+G + ++ L ++ RVL + + + L + +
Sbjct: 17 GTAVLFGASGVFG-ALATTGAEMIVLGRVLIAFAALSLFFLLRRQKL-----IPMQGREI 70
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
S +L VHW F + + + + P +F KERL +
Sbjct: 71 ASQCLSGVLLGVHWVSFYQGIKIGGVAIGTLGFASFPAFVALFEMLFFKERLKTKEYFLL 130
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAY---CFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ I L L+++T + + I + +
Sbjct: 131 IAISLGLILITPAFEFGHQATQGLLWGIFSALSYGILAVINRKNVSKISGSQSSWCQYLV 190
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
++ FS + + L + + +F + T ++ P+
Sbjct: 191 VAIMLLPFSAHQLPDVSWQDWFWIACIGLLCTTLAYTLFVSSLDTINARTAAMIISLEPV 250
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I + L + + ++++++ + L
Sbjct: 251 YAIAIAWIWLDEEPSLRMLLGGALIIVSVAIVNL 284
>gi|85704623|ref|ZP_01035725.1| possible transporter, RarD family, DMT superfamily protein
[Roseovarius sp. 217]
gi|85671031|gb|EAQ25890.1| possible transporter, RarD family, DMT superfamily protein
[Roseovarius sp. 217]
Length = 351
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/312 (12%), Positives = 102/312 (32%), Gaps = 16/312 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY 73
S + + G + + + + + V V ++ + R + + +
Sbjct: 42 SVPPPTDRILAGVALMLGFCVTAPLLDVAAKLASTSVPVGQITAARFIVQCALMAPFVWI 101
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + ++ L+ A +L FI A+ FV P I +
Sbjct: 102 LGLSLRVPREQW------LALLSRAALLFGATFCFIAAIRVMPLADALAIVFVAPFIVLL 155
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G +L E + ++ AA++ + +L + S ++A+ +A FA +
Sbjct: 156 VGKFYLGEDVGPRRVGAAMVGFVGVLFVIQPSFAAFGAVALFPLGTAVGFAFYILVTRGL 215
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSG---------GEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + L + L+L+G G +
Sbjct: 216 SRRVHPVTLQFHTGLIASLLCLPVMILAEGTGIEMLDPVWPEGVAWLWLLGVGFFATLSH 275
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +Y + A +T+ ++Y + + + + + I++ A + +
Sbjct: 276 MMMTYALSLAPSATLAPLQYLELPVATLLGYLVFHDFPNALTLTGIAIIIGAGLYMIHRE 335
Query: 305 VINSGKNKTKKS 316
+ + + T+++
Sbjct: 336 RVTARQLMTERA 347
>gi|169826433|ref|YP_001696591.1| putative transport protein [Lysinibacillus sphaericus C3-41]
gi|168990921|gb|ACA38461.1| Hypothetical transport protein [Lysinibacillus sphaericus C3-41]
Length = 292
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 106/293 (36%), Gaps = 12/293 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV A ILWG+T FL+ VS + V + R + + F
Sbjct: 5 LFVLLAAILWGMTGTAQTFLDNNVSPIAVATIRSAIGGGLLLAITIIFRK------INFL 58
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N ++ +A+I FF LT T + PV S + + K R + +
Sbjct: 59 NWSWKWTILAAASIALFQGLFFSSIRLTGVAVGTVATIGSAPVFSGIIEWLIWKNRPSGI 118
Query: 147 QIIAALLIILSLLIMTLHSGI-----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+A L+ I+ ++ +++G LA+ S + + + + E +
Sbjct: 119 WGLATLMAIIGCFLLFINNGEETVQASGFGLALCAGLSFAFYTNISKKLMAQEDALPAVA 178
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ S G + L + S + +F G+++ ST
Sbjct: 179 MTFSLCTLFLFPFSLSNGFTWLENMQNLWTILFMGIMCTSVAYLLFLNGLQKINSSTAVT 238
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ PL + VF++ + + + +++ +VV + + NK K
Sbjct: 239 LSLAEPLTAAILGVFLVGEQFSGLSWLGVAMLLGGIVVLTIGGRQSRLHNKLK 291
>gi|19705391|ref|NP_602886.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19713380|gb|AAL94185.1| Transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 301
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 91/295 (30%), Gaps = 11/295 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L F LWGI + FL + ++ +I +R++ + +Y+ +
Sbjct: 8 GMLSTFIGGTLWGINGVMGSFLFLYKNITTNWLIPYRLVL-AGLLLLGYLYYKKSSKIFD 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +L+F + + A+ + + + P + + + + +
Sbjct: 67 ILKNPKDLLQILLFGFIGMLGTQYTYFSAIQYSNAAIATVLTYFGPTLVLIFMCLKERRK 126
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+IIA LL + ++ H L + S + + + G
Sbjct: 127 PLKYEIIAILLSSFGVFLLATHGDVTSLQISFKALVWGMLSALSVVFYTVQPEKLLEKYG 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + I ++ + +FL+ F ++ G+
Sbjct: 187 PPIVVAWGMIIGGIFITFVTKPWNIDVIFDFTAFFVFLLIVFFGTIVAFILYLTGVNIIG 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ P+ + ++ L + I F ++ + + K
Sbjct: 247 PTKASIIACIEPVAATICAILFLGVSFGLLDLIGFVCIISTIFIVAYFDKKVKKK 301
>gi|110635489|ref|YP_675697.1| hypothetical protein Meso_3160 [Mesorhizobium sp. BNC1]
gi|110286473|gb|ABG64532.1| protein of unknown function DUF6, transmembrane [Chelativorans sp.
BNC1]
Length = 322
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 86/300 (28%), Gaps = 16/300 (5%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG + + + +S L + S R + +L + +
Sbjct: 22 LLLLTTLFWGGNAVAGKLAIGHISPLALTSLRWVVALAILLPFAL----KPLRRDWPEIK 77
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + ALL S P++ + + + + + LQ
Sbjct: 78 KHLPLLGILGVVGFTCFNAIMYSALLWTSAVNVSIEQAAIPLVIIVVNFLVFRAKTTWLQ 137
Query: 148 IIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ LL IL + + H LL L + + Y A + P
Sbjct: 138 LAGFLLSILGVGLTASHGDLARLTALDINLGDLLMLIAVLAYGLYTVALRFKPKIHWLSM 197
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ A+ + F ++ ++ + + + + + G +
Sbjct: 198 ITVLVAAALVSSFPLLAWEYASDNLVLPDLTGWVIVMYVSLMPSVLSQVFYIRGNELIGA 257
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ G+ P+ + S+ IL + +V+ + + + ++
Sbjct: 258 NRAGLFVNLVPIFGTLLSIVILGEEFHLYHATALALVICGIWLAEYSGRKSEAALARVRA 317
>gi|218682499|ref|ZP_03530100.1| putative transmembrane protein [Rhizobium etli CIAT 894]
Length = 289
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 102/292 (34%), Gaps = 7/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L AY+ + + L + V +++ R + + + G
Sbjct: 1 MKNSVSLGILLTSVAYMAFTFHDAIIKILTSTIPVWQILFFRS------LTILLGCLAYG 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + ++ +T+L W + A Q + Y+ PV+ L +
Sbjct: 55 RGKLVHQTMTSPIIKPMILRSTLLLSAWLSYYSAASRLQLAEVTTLYYAAPVVGTLLAWL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE + + +A + + +LI G+ + +A +A + + +
Sbjct: 115 ILKEEVTPARWLAVGVGFVGVLIACNPIGLTISWPVYLALQAAVLWAAAMVLLRKTSLHE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + +F++ G + + ++ L+ G++ G++RA +S
Sbjct: 175 KTIVQLTVSNVFFLAMTGVAVLYTWRTPDMTQLALLVATGVVAGLAQVALFEGMRRAPVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +YT+ + + I +++ A ++ ++ +
Sbjct: 235 VLAPFKYTSLIWAFLLGYLIWADLPTQNVIAGACMILGAGLIIIVSERLRRH 286
>gi|15613288|ref|NP_241591.1| hypothetical protein BH0725 [Bacillus halodurans C-125]
gi|10173339|dbj|BAB04444.1| BH0725 [Bacillus halodurans C-125]
Length = 312
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/307 (9%), Positives = 88/307 (28%), Gaps = 11/307 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G + V I WG+ Q L V V ++S R+L + +
Sbjct: 1 MKRWIGVILVLTGAICWGVGGTVAQKLFQQYDVDVNWLVSTRLLAAGALLLTIQCVLKDQ 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + A +L+F + ++ ++ + + ++ P + + V
Sbjct: 61 TQVFRVWQTRQSAGKLLIFGIVGMLAVQYTYMASIKHGNSAVATLLQYLAPAMIILYLFV 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIP 189
+ + L +L + + ++ ++ A+
Sbjct: 121 RRQSPFTGRDFVTVSLALLGCFFLLTNGSLSQLSVPTPAIVWGILSGVALAFYTLYAVPL 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + I + I + + + + F +
Sbjct: 181 LKQYDSLVIVGWAMVIGGVALGIIHPPWRVDLAQFEVETYVYLGFVVVFGTMLAFWFYIE 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ ++ PL +V+ + L +P + + ++ + +
Sbjct: 241 SLQTLSPKETSLLGSVEPLAAVVTMIVWLHEPFSAFQWLGTACILGMIFIMAWLKEKEVA 300
Query: 310 KNKTKKS 316
+ +K+
Sbjct: 301 SAEKEKA 307
>gi|332296433|ref|YP_004438356.1| protein of unknown function DUF6 transmembrane [Thermodesulfobium
narugense DSM 14796]
gi|332179536|gb|AEE15225.1| protein of unknown function DUF6 transmembrane [Thermodesulfobium
narugense DSM 14796]
Length = 296
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 92/286 (32%), Gaps = 11/286 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++G +F A LWG +F + L + R+ S +F + +F+
Sbjct: 6 TKNNLIGYIFTIGAASLWGFGGCVAKFAFNSSIDPLLFVKIRLALSFSLLFIYLYFFNRK 65
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + + + + +T+ + + A+ F + +PV+
Sbjct: 66 HILIDKSDISYFLILGVFGMSTMQLFY----LMAIKYTNVSTAVFLQYTSPVLMALYLYF 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-----IPLLSLAIAVTWSAYCFARKTIPVGS 192
F + ++ ++IA LL + + L + +
Sbjct: 122 FERNPISIPKVIAILLSLTGGACFVTNMTETSLKFQGLLYGMLAALGMAFISVHGRKSLK 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + A ++ F L + + + ++ G+
Sbjct: 182 KYSPLTLILYSSGFAAIFINIITPFDTTIFSLPKSTWFILIYFSIFSTLIPYFLYFKGVS 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ GI P + + + F LK+ + ++ I ++V ++
Sbjct: 242 IISPTNAGITACLEPFIASIVAFFWLKEGLTILQIIGGTLIVSGVI 287
>gi|311029754|ref|ZP_07707844.1| hypothetical protein Bm3-1_04229 [Bacillus sp. m3-13]
Length = 301
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/290 (10%), Positives = 87/290 (30%), Gaps = 6/290 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F ++WG++ L+ + L + V V+ R ++ + ++ + L L
Sbjct: 5 YAALFTLSLIWGMSFLFIKLLVVDLGVWGVVFWRCIFGAGTLLILLLIQNKLKLLRNLPL 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF-SYFVTPVISVFLGSVFLKERLN 144
+ +L + + + + + + S+F + + +
Sbjct: 65 FPIVLIAILNNALPWALIAVSETSISSSLASVVNATTPIWTILIGFSIFSSKMEKMQWIG 124
Query: 145 HLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++++L L I+ L G+ + A +++ +
Sbjct: 125 VSVGFLGIIVLLELNILQLFQDNLLGVGTMLGATICYGFGAHLSKRHLQNTPITVISFST 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+A ++ G + + + ++ Y +K
Sbjct: 185 LAVAGILSGIMMAFVQPSGFLAVGSVSIVVSLIGLGVFGSGVAYLLYYYMVKEGSAEFAS 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ Y P+ ++ +L + I ++ + + T K
Sbjct: 245 LVTYIVPITAMLWGSLLLGEKITPHMLFGLILIFSGVYLSSYKTKAKKQK 294
>gi|256826243|ref|YP_003150203.1| permease [Kytococcus sedentarius DSM 20547]
gi|256689636|gb|ACV07438.1| predicted permease, DMT superfamily [Kytococcus sedentarius DSM
20547]
Length = 356
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 84/305 (27%), Gaps = 20/305 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQV--SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + +G+ + L S V S RVL+ + A + G L
Sbjct: 37 GLALAIISAMAFGLAGPLGKPLMDAGWSPAAVTSGRVLFGSLLLAPATLLLLRGKWHLVA 96
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ P +A + A+ + ++ V+ V +
Sbjct: 97 QQRWPVLAY----GVLAVAGAQLCYFQAVTRIPAAVALLLEYMGVVLVVLVMWARTGRAP 152
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L + + + L+++ + L + + +A VGSS + +
Sbjct: 153 APLTLAGMGVAVGGLVLVLDLNSTGLDPIGVLWGLAAAVGLATYFLVGSSVDKDLPAVAV 212
Query: 204 AIPALFYVVWNGFSGGEHFFLGN--------------IPDTLFLIGYGLLNSFVFCIFSY 249
A +F G L + + + +
Sbjct: 213 AGLGMFVGGLTLLVAGLFGMLSLSTSTAPSTIGSLEVPWWVGVALLGLVSAGLAYGAGTM 272
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+R + + T L + +L Q + V+ + +V+ +V+
Sbjct: 273 ATRRLGATVASFVGLTEVLFTALFGWLLLGQHLGPVQLVGGAVVLGGIVLVRAQEARELR 332
Query: 310 KNKTK 314
+
Sbjct: 333 TAARR 337
>gi|34763013|ref|ZP_00143989.1| Transporter, Drug/Metabolite Exporter family [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27887314|gb|EAA24408.1| Transporter, Drug/Metabolite Exporter family [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 287
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 91/284 (32%), Gaps = 11/284 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+++ A LWG + + + + V++ R +++ + + F + K+T+
Sbjct: 1 MIYLLIASFLWGTSFIAGKIAYSMFDPSLVVALRYIFASIILLPVTISF---MHQEKETI 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + L + + P++ +G +F KE+++
Sbjct: 58 NKKDFFMLILLGILTYPLTSMLQFIGLSFTSASSATTIIGIEPIMITMIGFIFFKEKISP 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
+ ++ + + S + +S S +
Sbjct: 118 IVFFLGVVAFFGVALTVGVSALENVSFFGCFLVFLSTIVVSFWVQLSKKVLTKISSNYYT 177
Query: 205 ------IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + ++ G++R++ S
Sbjct: 178 ALTIQLGTLFALPIMLFLVKSWEIHYSLKGLIALLYLVVGCSIGAGWFWNKGLERSEASK 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
GI P+ I+ +V IL + ++ + I +V+++ + ++
Sbjct: 238 SGIFLALEPVFGILFAVLILGEKLNFLSIIGIILVILSAAICMI 281
>gi|323353189|gb|EGA85489.1| YMR253C-like protein [Saccharomyces cerevisiae VL3]
Length = 406
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 37/312 (11%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS----------VLEVISHRVLWSLPGVFFAIVYF 74
+G + + +Y + T+ LE L+++ R++ + G +
Sbjct: 61 IGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYIN 120
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+S + P+ LV Y+L+ F+ P +++FL
Sbjct: 121 KSTISDVP--FGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFL 178
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------------------- 172
V L+ER ++ + +L+ +L ++++ S +
Sbjct: 179 SWVILRERFTKVEALGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRLIATL 238
Query: 173 ---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ S + I + + L + ++ N + +
Sbjct: 239 VGLWGVLGMSCVYIIIRYIGKRAHAIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQ 298
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + + GI+R + +M YT L + V + K + I
Sbjct: 299 WILFGNLGVSGFIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIG 358
Query: 290 FGIVVIAMVVYL 301
I++ A + +
Sbjct: 359 MIIIISATLWVI 370
Score = 46.1 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 48/152 (31%)
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ L+++T+ + + V+ ++
Sbjct: 60 NIGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYI 119
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S G +L+ G F Y + +S ++ + AP L I S
Sbjct: 120 NKSTISDVPFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLS 179
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
IL++ V + I ++ +V+ + P+ +
Sbjct: 180 WVILRERFTKVEALGSLISLLGVVLIVRPSFL 211
>gi|320333746|ref|YP_004170457.1| hypothetical protein Deima_1140 [Deinococcus maricopensis DSM
21211]
gi|319755035|gb|ADV66792.1| protein of unknown function DUF6 transmembrane [Deinococcus
maricopensis DSM 21211]
Length = 304
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/301 (10%), Positives = 94/301 (31%), Gaps = 12/301 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
A P ++G Y++WG T + + + L +++ R L + ++ +V
Sbjct: 9 ARTAPTPLLIGLALAVV-YVVWGSTYFGIKVAISSLPPLGMLALRFLVAGAVLYAVLVAR 67
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
++ + +L+ T L + + S + L
Sbjct: 68 GARTPSAREWRSSLIVGTLLLGGGTGLVTLAEREASSSVAAMVIAISPLF-------ASL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ F ER + + + ++ + ++++ L A + + C+ +
Sbjct: 121 FARFWGERTSTREWLGIIVGLAGIVLLNLGDLRATPLSAALLVLAPLCWTFGSQWSRRLP 180
Query: 195 ---GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + +V + G + + + + + +
Sbjct: 181 LPDGLMGAATEMLTGGAVLLVLSVVFGEHWRTPTASSVWALVYLIVFGSMLAYSAYMFLV 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + Y PL+ ++ V + + + ++++ + + +LP S
Sbjct: 241 AHTRPALATSYAYVNPLVAVLLGVGFGGEHLSALGWAALVVIMLGVALVILPVPGRSRAP 300
Query: 312 K 312
+
Sbjct: 301 R 301
>gi|269962583|ref|ZP_06176930.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832696|gb|EEZ86808.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 292
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/296 (8%), Positives = 86/296 (29%), Gaps = 12/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++ + ++++ ++ + I R + + +
Sbjct: 3 NSERKAAFVLVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCI------- 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ +F ++ + + +
Sbjct: 56 KPLRAANKKDIFAAAGVGVLLGGALMCWIYAISISDTLGEGAFIMSLSMLFVPIVAWIMF 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL----SLAIAVTWSAYCFARKTIPVGSSEG 195
++R + ++ + IL L ++L G A A F +
Sbjct: 116 RQRPQRIFWVSLPIAILGLGCLSLAGGWQQSSSQLWFLGAALMLALHFNVNSKYSQKLPV 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L + L ++ + + F + L S + + + G K +
Sbjct: 176 LLLTCIQLFVTGLIGLLISSLVETVPTEVSTSIWIWFALSTLLATSLRYVMQTMGQKFVQ 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ ++ SV + + + + + +++ ++V+Y + K
Sbjct: 236 AGNAALIMILEPVWTVILSVIWYGEVLTSNKLVGCALILFSLVIYRTGGKLRFPKR 291
>gi|260886760|ref|ZP_05898023.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|330839424|ref|YP_004414004.1| protein of unknown function DUF6 transmembrane [Selenomonas
sputigena ATCC 35185]
gi|260863359|gb|EEX77859.1| putative membrane protein [Selenomonas sputigena ATCC 35185]
gi|329747188|gb|AEC00545.1| protein of unknown function DUF6 transmembrane [Selenomonas
sputigena ATCC 35185]
Length = 301
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 99/294 (33%), Gaps = 6/294 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G+L +F A +WG T + +E + + R + ++P V ++F+ K
Sbjct: 1 MRGSLALFVAAFIWGTTFVAQSVGMEGIGPFTYGAARYVVAVPVVLLLWLFFAPKRRAAK 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
IL + + T+F ++ V L +VF R
Sbjct: 61 AAGTYRPGFKAGALVGVILFLATTSQQVGMQYTTVGKTAFITC-LYLVLVPLAAVFFGSR 119
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF----FI 198
+ L A+L + L ++++ G L + S+ + + VG F +
Sbjct: 120 IRPLHWGGAVLALSGLYLLSMKDGFSLSYGDAIMVGSSLLWTMHILCVGRFASFVDAVEL 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + A + T L + + F + G + A+ +
Sbjct: 180 SLAQLFVCACASLALAFLFEQPTVAGIEGAATAILYAGIMSSGVAFTLQIVGQQYAEPAL 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ + +S +L + + +++ M++ L V + +
Sbjct: 240 AAVIMSLESVFGALSGAILLGESMSAAELSGCALMLAGMLLAQLAGVWGMKRPR 293
>gi|150010467|ref|YP_001305210.1| hypothetical protein BDI_3907 [Parabacteroides distasonis ATCC
8503]
gi|255012279|ref|ZP_05284405.1| hypothetical protein B2_00090 [Bacteroides sp. 2_1_7]
gi|298374836|ref|ZP_06984794.1| integral membrane protein domain protein [Bacteroides sp. 3_1_19]
gi|149938891|gb|ABR45588.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
gi|298269204|gb|EFI10859.1| integral membrane protein domain protein [Bacteroides sp. 3_1_19]
Length = 290
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 83/282 (29%), Gaps = 19/282 (6%)
Query: 30 VFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
I+WG T + T+ L +S +E++ +R + + +
Sbjct: 13 AILTVIIWGTTFVSTKILINTGLSPVEILLYRFVLAYFCILTIA-------HRRLWANCV 65
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + ++++ AL S P+I+ L +F KE L
Sbjct: 66 KDEFLLFLSGLCGGSLYFIAENTALGITLASNVSLLICTAPIITTVLSHLFYKESLRKGL 125
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ +L+ + + ++ + + L + + + L I
Sbjct: 126 LYGSLVALFGVGLVVFNGSVLLKVNPLGDFLTLVAATMWAFYCLILKRLSRSYPTLFITR 185
Query: 208 LFYVVWNGFSGGEHFFLG----------NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L + + + +++ ++ S
Sbjct: 186 KVFFYGILSLFFYFAIYPLNIKLELLKLPVVYLNILFLGVIASMLCYIMWNTAVRALGAS 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S L + I I ++ + +
Sbjct: 246 KTANYIYIVPLVTLITSAIFLSETITIASGIGALAIISGVYI 287
>gi|15600861|ref|NP_232491.1| hypothetical protein VCA0090 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121586889|ref|ZP_01676670.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121726961|ref|ZP_01680157.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147671653|ref|YP_001214891.1| hypothetical protein VC0395_0050 [Vibrio cholerae O395]
gi|153817724|ref|ZP_01970391.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821649|ref|ZP_01974316.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227811716|ref|YP_002811726.1| hypothetical protein VCM66_A0088 [Vibrio cholerae M66-2]
gi|229506739|ref|ZP_04396248.1| permease [Vibrio cholerae BX 330286]
gi|229510467|ref|ZP_04399947.1| permease [Vibrio cholerae B33]
gi|229517402|ref|ZP_04406847.1| permease [Vibrio cholerae RC9]
gi|229605212|ref|YP_002875916.1| permease [Vibrio cholerae MJ-1236]
gi|254850354|ref|ZP_05239704.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255746087|ref|ZP_05420034.1| permease [Vibrio cholera CIRS 101]
gi|262162074|ref|ZP_06031089.1| permease [Vibrio cholerae INDRE 91/1]
gi|262169013|ref|ZP_06036707.1| permease [Vibrio cholerae RC27]
gi|298499952|ref|ZP_07009758.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657476|gb|AAF96004.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548932|gb|EAX58973.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630595|gb|EAX62984.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126511766|gb|EAZ74360.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520846|gb|EAZ78069.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146314036|gb|ABQ18576.1| putative membrane protein [Vibrio cholerae O395]
gi|227010858|gb|ACP07069.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227014721|gb|ACP10930.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229345438|gb|EEO10411.1| permease [Vibrio cholerae RC9]
gi|229352912|gb|EEO17852.1| permease [Vibrio cholerae B33]
gi|229357090|gb|EEO22008.1| permease [Vibrio cholerae BX 330286]
gi|229371698|gb|ACQ62120.1| permease [Vibrio cholerae MJ-1236]
gi|254846059|gb|EET24473.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255735841|gb|EET91239.1| permease [Vibrio cholera CIRS 101]
gi|262022712|gb|EEY41419.1| permease [Vibrio cholerae RC27]
gi|262028149|gb|EEY46807.1| permease [Vibrio cholerae INDRE 91/1]
gi|297541933|gb|EFH77984.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 297
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 86/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQLSAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILDEPIGLNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|323486454|ref|ZP_08091778.1| hypothetical protein HMPREF9474_03529 [Clostridium symbiosum
WAL-14163]
gi|323400266|gb|EGA92640.1| hypothetical protein HMPREF9474_03529 [Clostridium symbiosum
WAL-14163]
Length = 303
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 99/299 (33%), Gaps = 18/299 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + M +G++ L+++ LE++ +++ R + + + ++
Sbjct: 1 MKMMKKDIRMMKAVAAAVLGNSFFGLSFLFSKVALERLEPFVLLAVRFIVAFVMLNLVLL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ L +L+ +++ F Y + + PVI++
Sbjct: 61 TGKVKIRLT-----GKPVQKILMLGMVQPVLYFTFENYGIRGTSTAFAGTLLAIVPVITL 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARK 186
G +F KE + LQ+ A+L ++ + +++L L AV S
Sbjct: 116 IAGVLFKKEIPSRLQVFGAVLSVIGVAVISLAQQRGSNEAGGVAFLFCAVVSSVGYNLLM 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE------HFFLGNIPDTLFLIGYGLLN 240
S F +L + +LF+ ++ G G +
Sbjct: 176 RDTAYSFTSFERTYVMLGLGSLFFACFSVIQSGGALGRLLQPLSGPGVWGSIFYLAAFSS 235
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F + +Y L+ I ++ I + + L + ++ I ++ + +
Sbjct: 236 VGAFFLLNYAFSYLNLAQASIFTNLVTVVSIAAGIVFLGESFTALQGIGSMAILTGVYL 294
Score = 42.6 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A + +G L P L+ + F +YGI+ + G +
Sbjct: 48 FIVAFVMLNLVLLTGKVKIRLTGKPVQKILMLGMVQPVLYFTFENYGIRGTSTAFAGTLL 107
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P++ +++ V K+ ++ + VI + V L
Sbjct: 108 AIVPVITLIAGVLFKKEIPSRLQVFGAVLSVIGVAVISLAQQR 150
>gi|163793506|ref|ZP_02187481.1| hypothetical protein BAL199_03324 [alpha proteobacterium BAL199]
gi|159181308|gb|EDP65823.1| hypothetical protein BAL199_03324 [alpha proteobacterium BAL199]
Length = 295
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 91/299 (30%), Gaps = 4/299 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ A G + + A+I + + L + + +++W+ F A
Sbjct: 1 MTAAAALAGPNRGIILILLAHIAFTTMDATNKTLSETYPVT----QIIWAFYVGFAAAAL 56
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + A +L ++ + AL P++
Sbjct: 57 AWAVFGGGVRNALHTRRPTLQLARAALLPLNMAAVVLALSLMSMAEVIAVGISYPLMITV 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L ++ LKE + + A ++ L +L++ ++ + +A FA I
Sbjct: 117 LSALVLKEDVGPRRWAAVVVGFLGVLLIVRPGLAVFNPASLIILGAAALFAVYQIMTKIL 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + AL V F + + L + + ++
Sbjct: 177 GRTDRPITLTLYTALVGAVLTSFFAPLDWHTPDATGWALLALTAAAGTVGHSLVIQALES 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
S + Y + V + D + + IVV + + + +G +
Sbjct: 237 TPASVLQPFNYVQLVWTTVVGFVVFGDLPDAMTVLGTSIVVASGLYVWWRERVRAGAVR 295
>gi|126739948|ref|ZP_01755638.1| hypothetical protein RSK20926_14716 [Roseobacter sp. SK209-2-6]
gi|126718767|gb|EBA15479.1| hypothetical protein RSK20926_14716 [Roseobacter sp. SK209-2-6]
Length = 297
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 89/299 (29%), Gaps = 14/299 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL------EQVSVLEVISHRVLWSLPGVFFAIV 72
+ + + A + T L+ + L + +++ R ++ + A++
Sbjct: 5 TKQNPALAAILITTASVFIAATTLFAKALGTEALGTPLHPMQISFGRFCFAFLAISSAVI 64
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L + + + + ++ + F+ PV ++
Sbjct: 65 VLRFKL--------QKPQWRLHLGRTSFGWLGVTLMFASVAYIPLADATAITFLNPVFAM 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L L ER+ + +AA + +L LI+ A+ +A + I +
Sbjct: 117 LLAIPLLGERVGPWRWLAAFVALLGALILLRPGPSSFQPAALLALAAALVMGMELILIKK 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + VL ++ + + L L G G+L + F G+
Sbjct: 177 LAGQESPLQVLWFNNALGLIIASIAASTVWQAPTPTQWLALAGLGILMACAQACFINGMA 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
RA S Y + + + D + ++ + K+
Sbjct: 237 RADASFAAPFSYATLIFATLYDFIGFAKKPDLITIAGAATILSGAALLAWREGRLRAKS 295
>gi|310816774|ref|YP_003964738.1| putative transporter [Ketogulonicigenium vulgare Y25]
gi|308755509|gb|ADO43438.1| putative transporter [Ketogulonicigenium vulgare Y25]
Length = 305
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 91/295 (30%), Gaps = 14/295 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A + W + + L + + + R W+L + +V + L
Sbjct: 11 ILLTLASLFWAGNFVVGRAILTEAPPVAMAFWR--WALAIIPVVLVARGRVDVKHELALV 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++V ++ F L P++ + V +ER
Sbjct: 69 RRHWLIIVVLGVLGISCFNTFVYLGLRETASINALLMQSAMPLLILLACFVLYRERPLPQ 128
Query: 147 QIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
QII +L + ++ + L LA V ++ Y + P
Sbjct: 129 QIIGVVLSLGGVIFIAARGHLETLTSLGFNTGDLWVLAAVVAYTFYSALLRKKPAMHPLS 188
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F + + ++ AL + G+ L + + F+ G++
Sbjct: 189 FLVALFIVGALALLPPYLTEHASGQVMRLTPQMVAALAYLVIFPSFLSYLCFNRGVELLG 248
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G+ + P+ +V L + ++ I ++ + ++V K
Sbjct: 249 AGRAGLFIHLLPVFGSALAVIFLGERFESFHLIGAVLIGVGLLVAARRGRSARRK 303
>gi|229143306|ref|ZP_04271737.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST24]
gi|228640113|gb|EEK96512.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST24]
Length = 308
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 100/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 183 ECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTISFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 296
>gi|254461968|ref|ZP_05075384.1| integral membrane protein, putative [Rhodobacterales bacterium
HTCC2083]
gi|206678557|gb|EDZ43044.1| integral membrane protein, putative [Rhodobacteraceae bacterium
HTCC2083]
Length = 300
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 89/295 (30%), Gaps = 8/295 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
E + ++G ++ A + + + + E R L + +
Sbjct: 1 MEKQAQRPLVGVFWMVTAGLCFVAVTALVKLNGTRLPAAESAFVRYALGLVFLIPMM--- 57
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L+ T + ++ + +A+ + ++TPV
Sbjct: 58 ----RALRATTLTLRLWKLVAVRGLFHTFGVTLWFFAMTQISIAEVTAMNYLTPVFVTVA 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++FL ERL +IIA L +L +I+ L IA+ A F +
Sbjct: 114 AALFLGERLAFRRIIAVLCALLGAMIILRPGFRELSIGHIAMLAVACMFCVSYLTAKLLA 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V+++ ++ + + + + L G + + A
Sbjct: 174 DAVPASVVVSMLSIAVTIGLAPLAFSVWIPPTLQEVGLLFGVACFATAGHFAMTLAFANA 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
L+ + + + + F + +D + +++ ++ +
Sbjct: 234 PLTVTQPVTFVQLIWAVSLGYFAFGEAVDIWVILGGFVILCSITFITWREAVLKR 288
>gi|125575252|gb|EAZ16536.1| hypothetical protein OsJ_32010 [Oryza sativa Japonica Group]
Length = 425
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/270 (9%), Positives = 77/270 (28%), Gaps = 11/270 (4%)
Query: 51 SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIY 110
V + R+L + + A G++ + + G
Sbjct: 156 GPFFVAALRLLPAGALLVAFAAARGRRQPSGWAAWVAVAAFGLVDAACFQGFLAEGLQKT 215
Query: 111 ALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT-------L 163
+ + S V + ++ G + L + L++L + ++ +
Sbjct: 216 SAGLGSVIIDSQPLTVAVLAALLFGESIGAIGVGGLVLGVVGLLLLEVPALSVEGNDTAI 275
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA----IPALFYVVWNGFSGG 219
A + + + + S ++ + + + + G
Sbjct: 276 WGSGEWWMFLSAQSMAVGTIMVRWVSKYSDPIMATGWHMIIGGLPLLVISVLNHDPALNG 335
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
L L ++ + ++ Y R L+T+ + + P+ + L
Sbjct: 336 HLQELTLNDVLALLYTSIFGSAISYGVYFYNATRGSLTTLSSLTFLTPMFASIFGFLYLG 395
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ V+ + ++A+ + +++
Sbjct: 396 ETFSPVQLGGALLTLVAIYMVNYKSIVGEK 425
>gi|94969661|ref|YP_591709.1| DMT family permease [Candidatus Koribacter versatilis Ellin345]
gi|94551711|gb|ABF41635.1| Putative 10 TMS drug/metabolite exporter, DME family, DMT
superfamily [Candidatus Koribacter versatilis Ellin345]
Length = 327
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/315 (12%), Positives = 93/315 (29%), Gaps = 26/315 (8%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYT------QFLEQVSVLEVISHRVLWSLPGV 67
++ E++S P + G L+V A + WGI+ + L + ++ + +
Sbjct: 1 MTSEHSSHP-LRGYLYVAAATLCWGISASLGRAAFTGKLLGGLRPIDPLILAQARTTIAF 59
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
F L + + + LA + A+ +V
Sbjct: 60 FLVTPILWTLRGRSSTKLPRREMLQAFLLGVFGLAFSNYAYYLAIQKTTVATAIILQYVA 119
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW--------- 178
PV + ++R ++ +L +L + +A+
Sbjct: 120 PVWVLLYMVFTRQQRATASRVWGVVLAVLGCVFAIGVFAGVGHFPFLAIAAGRIKLNTVG 179
Query: 179 ----------SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
A+ + + + + L ALF+++ N
Sbjct: 180 VLAAQVAAVSFAFYSIYGRHLLQVYDRWAVLTNSLLGAALFWIIVNPPWKIIAAHYAPKQ 239
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
++ + F ++ G+ + V + P+ +V + L + + V+
Sbjct: 240 YAFMVLFSITSAAVPFSLYFAGLHHLDATRVIVTAALEPVFSVVIAAIFLGETVTLVQMA 299
Query: 289 VFGIVVIAMVVYLLP 303
+V+ A+
Sbjct: 300 GMAVVLSAISFVQRS 314
>gi|33861497|ref|NP_893058.1| integral membrane protein, DUF6 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33634074|emb|CAE19399.1| Integral membrane protein, DUF6 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 295
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 96/285 (33%), Gaps = 15/285 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + + + ++ + + E++ R L SL I K+
Sbjct: 18 LILASFFFSLMTVCVKKIDTRIPIYELVFFRSLLSLFITSMII--------NKKNLNPWG 69
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K +L+ + + YA+ +++ + P+ + + E++N I
Sbjct: 70 KNKPLLILRGILGTIALVCIFYAIKNMPLNISTVIQYTYPIFISIFAGILINEKINKNLI 129
Query: 149 IAALLIILSLLIMTLHSGIPL------LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
IA++ L +LI+ + + A A I V +
Sbjct: 130 IASITGWLGILIILNPYQLSSLNIELDKFTVLIAFLGAISTALAYITVKKLSLTEDIFII 189
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L V+ ++ NI D ++++G G+ + G+K+ S +
Sbjct: 190 IKYFPLISVITLSPIVFFNWVTPNINDLIWILGIGMFTQAGQTFLTIGLKKLPTSEAARI 249
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y L + + + I+ + +V++ ++ +
Sbjct: 250 NYLQVLFGSLWGILFFNELININFIVGAVLVLLGTIISTSKKLKK 294
>gi|148253987|ref|YP_001238572.1| hypothetical protein BBta_2506 [Bradyrhizobium sp. BTAi1]
gi|146406160|gb|ABQ34666.1| putative membrane protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 337
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 6/270 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L V + + + L+T+ +E V ++ R L+ + +++
Sbjct: 41 RAGALIVAISAVAFSTAGLFTRLVE-ADVWTMLFWRGLFGGIMIGAYVIWTERTAHRKAF 99
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
T V +AT F+ AL + Y P I+ + V+ +ER
Sbjct: 100 TA----IGWAGVLTATCSTAGTICFVAALRMTTVADVTIVYATAPFIAAGIAWVWPRERP 155
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ ++A+ L +L + ++ + +P + + + V + + M
Sbjct: 156 RCVTLVASGLALLGV-VILSAAALPAARMLGNLLALTMTILLALMMVINRRFRHVSMVPA 214
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + F + + L ++ + + G +R + ++
Sbjct: 215 ACLSAFACAVLVAPLADPMSVTGADLVLLMLFGTTQFGMGLLLLTIGSRRIPAARASLLG 274
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
L + + + +V
Sbjct: 275 NLELPLAPLWIWIAFGELPSRSTLVGGAVV 304
>gi|99082769|ref|YP_614923.1| hypothetical protein TM1040_2929 [Ruegeria sp. TM1040]
gi|99039049|gb|ABF65661.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 313
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 105/310 (33%), Gaps = 13/310 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
++K S ++ A L+ I + + Q V + + R + LP + +
Sbjct: 1 MAKSLTSHRPILAITLKVTAIGLFTIMSGLIKEITQTVPTGQAVFFRSFFVLPVILVWLA 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S L+ + + + + G AL + + TP+ ++
Sbjct: 61 ARGDLPSGLRTR-----SPMLHFWRGVVGTTAMGLNFAALAILPLPEVTALGYATPIFTL 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFAR 185
L ++ L ER+ ++I A + ++ +LIM A+ V +A
Sbjct: 116 VLAALLLGERIRIIRISAVAIGLVGVLIMLSPRLGGAGSFQDMAFIGAMLVLAAAALRGF 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I + ++ ++ + + + + ++P L +I G + +
Sbjct: 176 VQIHIRKMVQSEETAAIVFYFSVTASLLSLLTLPFGWVKPDMPLLLLMISTGFIGAIAQI 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A S + +Y + L ++ + V + +V++A + +
Sbjct: 236 LITSSYRFAPASLLAPYDYVSMLFALLIGYVWFSEWPSLVMLLGAALVIVANGIVIWRES 295
Query: 306 INSGKNKTKK 315
+ K
Sbjct: 296 RLGLERGKAK 305
>gi|94984220|ref|YP_603584.1| hypothetical protein Dgeo_0112 [Deinococcus geothermalis DSM 11300]
gi|94554501|gb|ABF44415.1| Permease DMT superfamily [Deinococcus geothermalis DSM 11300]
Length = 298
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 88/284 (30%), Gaps = 13/284 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + W + L+ + + +R L + + + L D +
Sbjct: 18 AILVTIVFWASAFAGIRAGLDTFTPGHLTLYRFLVASAALGAYAAVARIPVPPLADLGRI 77
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
S + ++ Y LT S PV++ L + F ERLN L
Sbjct: 78 GLL------SLFGITLYHVCLNYGELTVPAGTASLIIAAGPVMTALLATRFAGERLNRLG 131
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVGSSEGFFIEMC 201
+ + + + ++ L G L A+ +++ F + + +
Sbjct: 132 WLGTFISLCGVALIVLGRGESLDFTRGALLILAAALFTSLYFVFQRPLLARMNPLHFTVW 191
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + L +V+ G E + + + +++ + R S
Sbjct: 192 SLLLGTLPLLVFLPGFGTELARAPLPAHLAVIYIGLFPAALAYLTWTFALSRVGASAATS 251
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y +P+ I+ + L + + + + + +++
Sbjct: 252 FLYVSPVFAILIAWLWLNEWPTLLSVVGGAVALAGVILVNTRGR 295
>gi|332531443|ref|ZP_08407347.1| hypothetical protein HGR_15784 [Hylemonella gracilis ATCC 19624]
gi|332039112|gb|EGI75534.1| hypothetical protein HGR_15784 [Hylemonella gracilis ATCC 19624]
Length = 298
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 91/287 (31%), Gaps = 15/287 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G ++ + + + + V + ++ +R+L++LP + G + L
Sbjct: 14 GLIYATVGAVAFSGKAIIVKLAYRHGVDAVTLLMYRMLFALPIFLGMAWWSGRGQAPLT- 72
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+G+L T + L L ++ P I + LG + ++ +
Sbjct: 73 ---RKDWLGILGLGLTGYYLASFLDFAGLAYITASLERLILYLNPTIVMLLGWLLYRKEV 129
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVGSSE 194
+ Q++A + +L++ H S + A++++ Y +
Sbjct: 130 SARQMLAMAISYAGVLLVFGHEVSLQGSHVLLGVLLVFGSAISYAVYLVYSGQMVQRLGT 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A + + L L+ + + GIKR
Sbjct: 190 LRLVGWATSAACLFCIAQFLLLRPISAMQVAPPVLWLSLLNATACTAVPVLLVMMGIKRI 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ PL I+ +L +P+ +V+ + ++
Sbjct: 250 GPAAAAQAGMVGPLSTILMGALLLDEPLTLWVLAGTALVLTGIFLFS 296
>gi|308048227|ref|YP_003911793.1| hypothetical protein Fbal_0505 [Ferrimonas balearica DSM 9799]
gi|307630417|gb|ADN74719.1| protein of unknown function DUF6 transmembrane [Ferrimonas
balearica DSM 9799]
Length = 281
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 104/279 (37%), Gaps = 9/279 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A +L+ T L+++ + + E+ + R + + +F + LL+ P+
Sbjct: 9 LAVLLFSGTALFSKLI-PLPATEITALRSVLAGLALFTLLGLTGQRARLLR-----PRDY 62
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
G+++ ++ +HW + A+ + ++F PV++V + ++R + +A
Sbjct: 63 GIVIGLGMLIGLHWATYFAAMQFSTVAIGMIAFFTYPVMTVLAEPLLARQRPALADLASA 122
Query: 152 LLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L+++L + ++ + + + +A AR + + + ++
Sbjct: 123 LIVLLGVALLVPTPSLDSDVTQGVLLGILSAALFTARNLLQRRYFAHYSGAQTMAYQTSV 182
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
++ F + L L+ + + S ++ TV ++ PL
Sbjct: 183 AALMLLPFISVPEGAMATTDWGLLLLLGIGFTALPHAMLSQSLRSLSAKTVSLVSCMQPL 242
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V + +L + D + G+++ A +
Sbjct: 243 YATVLAALLLSEWPDLKTLMGGGLILAAALYETARAHRR 281
>gi|302533219|ref|ZP_07285561.1| integral membrane protein [Streptomyces sp. C]
gi|302442114|gb|EFL13930.1| integral membrane protein [Streptomyces sp. C]
Length = 341
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/286 (9%), Positives = 69/286 (24%), Gaps = 12/286 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + +G + + + L + L ++ RV + + +
Sbjct: 29 GLGLALVSACAFGGSGVAAKPLIEAGLDPLHMVWLRVAGAALVLSPLAWRHRALVRRKPL 88
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI----SVFLGSVFL 139
L V + A A + L + + + +
Sbjct: 89 LLAGFGLVAVAGVQAFYFASLSRIPVGVALLLEYLGPALLLGYIRFVQRKPVTRAAAAGA 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ L + + L L + + G+ A A
Sbjct: 149 AVAVAGLACVVEIWAGLRLDLFGVLLGLAAACCQAFYFVFADQGADAEDAPDPLGVIAHG 208
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL------FLIGYGLLNSFVFCIFSYGIKR 253
M V A+ + D + F + ++R
Sbjct: 209 MIVGALVMTVIARPWRIDWQVLGGDAAMGDLRVPALALLAWVVLVATVFAYLTGVVSVRR 268
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G++ ++ V + +L + + + + +V+ +
Sbjct: 269 LSPQVAGVVACLEAVVATVLAWVLLGEQLSGPQVLGGALVLGGAFI 314
>gi|315506016|ref|YP_004084903.1| hypothetical protein ML5_5279 [Micromonospora sp. L5]
gi|315412635|gb|ADU10752.1| protein of unknown function DUF6 transmembrane [Micromonospora sp.
L5]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 81/289 (28%), Gaps = 16/289 (5%)
Query: 40 TPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL--------LKDTLKNPK 89
++ + VS ++ R + ++ ++ G T +
Sbjct: 1 MAVFGKLAYDAGVSPTSLLLVRFGLAAALLWLVLLTRPGLRRAAPGDAGGGRPATRRGRV 60
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
L A A F AL L + + PV+ + ++RL +
Sbjct: 61 VAVALGLGAIGYATQASLFFSALELMDASLLALILYTYPVMVTVAAVLLGRDRLTPGRGA 120
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP------VGSSEGFFIEMCVL 203
A + L++ L +G A+ A V + V+
Sbjct: 121 ALVAASGGTLLVLLGAGGAGFHPLGALLAFAAAVTYTVYILVSDTVVHRLAPVALSALVM 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A +GG G + F G++R ST I+
Sbjct: 181 TGAAGTLGARALVTGGVDLSFGWRGWFWLAAIAVVSTVVAMLAFFAGLRRTGPSTAAILS 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ + L + + + +V+ ++ V L + +
Sbjct: 241 TFEPVVTAALATLALGEALTLAQLAGGALVLSSVAVLQLRPGRVRPREQ 289
>gi|238019838|ref|ZP_04600264.1| hypothetical protein VEIDISOL_01714 [Veillonella dispar ATCC 17748]
gi|237863362|gb|EEP64652.1| hypothetical protein VEIDISOL_01714 [Veillonella dispar ATCC 17748]
Length = 297
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 96/292 (32%), Gaps = 11/292 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G L ILWG++ QFL +++ +++ R L + + +F G ++
Sbjct: 6 VIGVLLTLLGAILWGVSGASVQFLSNFRDMNLEWLVTMR-LITAGLLTVIYAWFKYGNAI 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
VG++VF +A+ + ++ + + ++ P + +
Sbjct: 65 FDVFRNLKDIVGLIVFGVFGMALCQYTYFKSIALAGAGIATVLQYLAPSMIIIYMLARYG 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AYCFARKTIPVGSS 193
+R + +II+ +L ++ + + + G S +AV ++ + +
Sbjct: 125 KRPSKGEIISVILALVGTICLMGNDGFSFESFPLAVLMWGLLSAVGVAVYSVSPVDLLYK 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G + + + + L F + G+KR
Sbjct: 185 YGTLPIVGFGMLLSGIVAAILFHQPNSYALWDVWTVIGCFNVVFLGTIVSFNAYLEGVKR 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
I+ P+ L + I +++ +++ L
Sbjct: 245 IGAVPGSILSSIEPISAAFFGWAFLDNQFSALGLIGMAMIIATVIIIALEKR 296
>gi|225174577|ref|ZP_03728575.1| protein of unknown function DUF6 transmembrane [Dethiobacter
alkaliphilus AHT 1]
gi|225169704|gb|EEG78500.1| protein of unknown function DUF6 transmembrane [Dethiobacter
alkaliphilus AHT 1]
Length = 289
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 98/288 (34%), Gaps = 17/288 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +FV A LWG T ++F+ V L + R++ S ++ +
Sbjct: 3 KSKAGFIFVILAGALWGTTGTISKFIFEFGVDPLTLSLLRIVISFVLLYAFAITTKR--- 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L F A +A F++ A+ + P S+ + L
Sbjct: 60 --RLHFNQEDFLFFLAFGAISVAGFNIFYLTAIQLTTVTTAVILLYTAPAFSLLAARLVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIP 189
KE L +I+A +L ++ + ++ G+ A F++
Sbjct: 118 KEPLTKQKIMALVLTVIGIFLVVEGYRPGQLLLNIPGVLSGLGAGLTFGIYGIFSKGAFQ 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G + + + + V+ + L ++ + F
Sbjct: 178 RGYGTLETVILALGTGMLVLLVLRPPWLLTPLVAEPMALWLLVVMIAVFSTMLAYVFFVT 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
G+ + ++ P++ I++++ L + + ++ I V+ A+
Sbjct: 238 GLVHVEAGKATLVAAVEPVVAIIAAIIFLNETMTFLQFIGVLAVLTAV 285
>gi|78356193|ref|YP_387642.1| hypothetical protein Dde_1146 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218598|gb|ABB37947.1| membrane protein, putative [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 294
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 93/290 (32%), Gaps = 17/290 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + F A +LW + + L + +S L R W + + +S
Sbjct: 7 IGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWR--WGIASAALLPLGWSAFRRDWPA 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + F + + A T S +PV +FL E +
Sbjct: 65 IVAHKWYFLLTAFVG--ITIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGEAI 122
Query: 144 NHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ ++ ++ + +L++ G + LA AR+
Sbjct: 123 SPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLWMLLAAVCFAVYSVLARQRPQGV 182
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S F + + + L G + L + + +++ +
Sbjct: 183 SQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNKAV 242
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S G++ Y+ P+ +++ +L +P+ + +V+ +++
Sbjct: 243 GILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLAT 292
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 13/145 (8%), Positives = 45/145 (31%)
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF 223
GI ++ A+ + F + + I + + + +
Sbjct: 4 GKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRRDWP 63
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
FL+ + + + + + + ++ ++P+ M + + L + I
Sbjct: 64 AIVAHKWYFLLTAFVGITIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGEAIS 123
Query: 284 TVRTIVFGIVVIAMVVYLLPTVINS 308
R + + ++V + + +
Sbjct: 124 PRRVAGLVVALCGVLVLISRGHVQA 148
>gi|73671044|ref|YP_307059.1| integral membrane protein [Methanosarcina barkeri str. Fusaro]
gi|72398206|gb|AAZ72479.1| integral membrane protein [Methanosarcina barkeri str. Fusaro]
Length = 321
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 87/292 (29%), Gaps = 14/292 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + A +++G LY + LE +S+ +I +R+L+ L + F + L
Sbjct: 9 LELLVACVIYGTVGLYMEQLEDMSIGSIIFYRILFGLTALLFYLAVTGN-----LGQLAL 63
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ L+ + + + A+ + P+ L + L E+
Sbjct: 64 KRKKKYLLLLGVLYVLQMFSYYSAIRYLGASSAVLLLYTDPIYLTILAPLLLGEKNTGKT 123
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV----- 202
I A L ++ + +T G + F S +
Sbjct: 124 IFALFLGLIGVFYITRPEGGFEQLEFGSSYLKGVLFGLTGGLFSSGVIISVRYLRNEYNG 183
Query: 203 ----LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + F+ + + ++ L+ + G+ T
Sbjct: 184 LTQLFWQSTISLFFLSPFAVSVPRNVLTANLPVLILFGVLITGIGAVFYIRGVTGVNAIT 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ I IL PI + ++ A +V L + K
Sbjct: 244 GSLFALLEPVSCIFFDYTILGNPIHSGMLTGCVFILAAAIVISLDDSFSLKK 295
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 41/135 (30%)
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
L + V Y + + + L +++ G L
Sbjct: 7 PHLELLVACVIYGTVGLYMEQLEDMSIGSIIFYRILFGLTALLFYLAVTGNLGQLALKRK 66
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+L+ G+L + I+ S+ ++ YT P+ + + + +L +
Sbjct: 67 KKYLLLLGVLYVLQMFSYYSAIRYLGASSAVLLLYTDPIYLTILAPLLLGEKNTGKTIFA 126
Query: 290 FGIVVIAMVVYLLPT 304
+ +I + P
Sbjct: 127 LFLGLIGVFYITRPE 141
>gi|163941019|ref|YP_001645903.1| hypothetical protein BcerKBAB4_3097 [Bacillus weihenstephanensis
KBAB4]
gi|163863216|gb|ABY44275.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 295
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 95/295 (32%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +WG + +++ L+ + ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWGGMYVVSKYVLDFIPPFTLVWIRFIIAFVVLYAILKTTEKKQK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + S TP V ++ L
Sbjct: 62 KKVTIHKKDWLLFAWI-GFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALLL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLIITTHAIFFSLFFITPCMVWELQSSPIEHINMYVLLGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 ELMDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFICGILIICSVIITTFEKQK 295
>gi|301162290|emb|CBW21835.1| putative transmembrane protein [Bacteroides fragilis 638R]
Length = 304
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 112/300 (37%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++ G ++ + +G+ PL+T L ++ ++ +R L+S + +
Sbjct: 1 MKSLKGIIYAMISSGTFGLIPLFTIPLMGNMGMNESNILFYRFLFSTLMMGAVCLLHKST 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + L + + + A+ F IY+ + + +F+ P+ FL V
Sbjct: 61 LKINMKHLISI------IGLGALYALTALFLIYSYHYITSGVATTIHFLYPICVSFLMVV 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVG 191
F KE + +AA L ++ + +M G + + I + + Y A + +G
Sbjct: 115 FFKEEKSKSLFLAASLSLIGVALMCWSGGGSIRLMGIGLAALTILTYGIYIVALNQLDIG 174
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ VL + + +++ F+ G L L +
Sbjct: 175 KLPAEVLTFYVLLGGCVIFFIYSLFTAGISSIPSTKAGFYILALAFLSTVISDLTLILAV 234
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K A +T I+ PL+ +V V + + I ++++++++ +L K
Sbjct: 235 KYAGSTTTAILGSMEPLVAVVVGVLVFSEHFTLQSLIGLLLILMSVIIVILADQQKKSKR 294
>gi|268315922|ref|YP_003289641.1| hypothetical protein Rmar_0349 [Rhodothermus marinus DSM 4252]
gi|262333456|gb|ACY47253.1| protein of unknown function DUF6 transmembrane [Rhodothermus
marinus DSM 4252]
Length = 294
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/291 (8%), Positives = 74/291 (25%), Gaps = 4/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T+ L + A +WG + + +E + + R + +
Sbjct: 1 MKTRTLRSDLLILLATAIWGFAFVAQRVGMEHMGPFWFNALRFAMGSLVLVPLL---GRR 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + A + + + Y + +
Sbjct: 58 DPADVPPAVQLRVGLLAGLILFLGASAQQIGLVYTTAGKAGFITGLYVIFVPLLGVFWRQ 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++AA + L + TL + + ++ A+ F
Sbjct: 118 HTYLDAWLGAVLAAAGMYLLSVAETLTINPGDVLVLVSAVCWAFHIHLIDRYAHRMPPFR 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ A+ + L L + + + A +
Sbjct: 178 LAFTQFVACAVLSGLTAALVETPVLPTAREAWGALLYAGFLSVGIGYTLQVVAQREAHPT 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ + + ++L + + T + + G+++ M++ L
Sbjct: 238 HAAILFSLEAVFAALGGWWLLDETLSTRQLLGCGLMMGGMLLSQLRPFTRR 288
>gi|118476037|ref|YP_893188.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|118415262|gb|ABK83681.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis str. Al Hakam]
Length = 310
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+L++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLL----FSFKQLKRSVEH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVLWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I L + +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIALGGVGVLLITIPSSNVDQEVSLIGDILILLSTFLFAFYTILLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMAETFYYGFPKIETWKTGFSVMYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 244 TVSASVSGLYLNALPLISIVASIVLLDESVTWKIVIGGSLVLIGV 288
Score = 39.9 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 49/136 (36%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L + ++++ +
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLLFSFKQLKRSVEHKQVL 67
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I I
Sbjct: 68 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQLNYWI 127
Query: 289 VFGIVVIAMVVYLLPT 304
+ + +++ +P+
Sbjct: 128 GIALGGVGVLLITIPS 143
>gi|89076197|ref|ZP_01162550.1| drug/metabolite transporter (dmt superfamily protein)
[Photobacterium sp. SKA34]
gi|89048083|gb|EAR53669.1| drug/metabolite transporter (dmt superfamily protein)
[Photobacterium sp. SKA34]
Length = 301
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 93/293 (31%), Gaps = 14/293 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G + + A + + ++L ++++ R +++P +F I+
Sbjct: 4 KNKNTLGAILIIIATLSLTLKDSADKYLIQHDYHPIQMVFFR--FAIPFLFMLILMPKQT 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + T + + + + AL + + + + G++
Sbjct: 62 KTAILATNSKLLLR------SFLFLMCAVTSVIALNYIPLEIYIIIVQMGSIAYMLGGAI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSS 193
F E+L ++IIA +L + ++I+ + I L I + + + T + S
Sbjct: 116 FFNEKLTAIKIIATILGFIGVVIVINPTNIYGLHWMYLLPILIAVTNSGYNLITKTIDSK 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + ++ + + ++ +
Sbjct: 176 ISLVSILINSFFILGLVSTLALIIDPDIWKTPSLAALPYFLTIPIVTIVSQLCLIKAMNV 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
A+ S V Y L + ++ + I +VIA ++ +
Sbjct: 236 AEASHVAPFFYFQILFSCIFGYWLFNEIPTVYTIIGGIFIVIAGLLITYSSYR 288
>gi|262191917|ref|ZP_06050085.1| putative membrane protein [Vibrio cholerae CT 5369-93]
gi|262032217|gb|EEY50787.1| putative membrane protein [Vibrio cholerae CT 5369-93]
Length = 297
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 86/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQISAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILDEPIGLNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|222148843|ref|YP_002549800.1| permease [Agrobacterium vitis S4]
gi|221735829|gb|ACM36792.1| permease [Agrobacterium vitis S4]
Length = 312
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 96/306 (31%), Gaps = 19/306 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + ++ ++ +E +S ++ +R + L +V G
Sbjct: 9 SNPLRGMALMAGCMLVLPGMDAIAKYMANIEGMSPGQITFYRFFFQLACTLPFLVALQGR 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + F A+ YFV P I L ++
Sbjct: 69 NAFTAK------RPFLNLLRGALHGAASLCFFAAVKYMPLADVFAIYFVEPFILTALSAL 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL +++ + +A L+ +I+ S + ++ A+ FA +
Sbjct: 123 FLGDKVGWRRWLAILIGFGGAMIVIQPSWEVFGATSLLPVLCAFLFALYMFLNRAIGNAD 182
Query: 198 IEMCV----------LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
M + AL G + ++ L L+ G+L+ + +
Sbjct: 183 SPMTMQTMSGVGGTIFMGGALLIGQSAGSADFTASLPTSVTGLLLLVLLGVLSGHIHLLV 242
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ A LS + +Y + + + + + GI+V + + L +
Sbjct: 243 VKAFRMAPLSVLAPFQYFEIIAATILGYVLFDDFPSPSKWLGIGIIVASGLFILWREHRS 302
Query: 308 SGKNKT 313
+ K
Sbjct: 303 ASAEKA 308
>gi|149188488|ref|ZP_01866781.1| hypothetical protein VSAK1_20874 [Vibrio shilonii AK1]
gi|148837706|gb|EDL54650.1| hypothetical protein VSAK1_20874 [Vibrio shilonii AK1]
Length = 305
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 89/294 (30%), Gaps = 12/294 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIV 72
S+ ++ + G +F L+ + P+ + Q ++S R SLP +
Sbjct: 8 SQTSSKPQYVKGLMFALSGAALFSLKPILIKIAFQYGGDATTIMSLRAFSSLPFYLLVLC 67
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ ++ ++ V I AL L F+ P V
Sbjct: 68 ILCRSAEKRQHVRRHGWQAALVGVLGYY--VASYLDIAALEYISAQLERLLIFLFPSFVV 125
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-----SGIPLLSLAIAV---TWSAYCFA 184
VF + + L + A + L + + H G +A+ A
Sbjct: 126 LFSWVFWGQAPSKLVLKAVGIGYLGIGFIIAHDLQSFGGEVWKGSGLAIASAIVFAAYLM 185
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + L +V SG + L +I
Sbjct: 186 LSKNIISKIGSELFTSIGMGSAGLAILVHLSLSGISPSYWSFPLILLGIILGIFCTVLPS 245
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + G+ + + + + P + +++VF+L + + +V+ ++
Sbjct: 246 YLIAAGMAQLTATELSVTSNIGPGITALAAVFVLGEAFTVYHAVGLCLVLYSVY 299
>gi|331266665|ref|YP_004326295.1| conserved hypothetical protein, integral membrane protein
[Streptococcus oralis Uo5]
gi|326683337|emb|CBZ00955.1| conserved hypothetical protein, integral membrane protein
[Streptococcus oralis Uo5]
Length = 301
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 101/301 (33%), Gaps = 10/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GTL+ A I WG++ Q+L +S L + + R++ + + +
Sbjct: 2 SKTVKGTLYTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLIIAGLALVVLSYMTAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 LYAFFKDR-KSLLSLLLFALFGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILVYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K +II+ L I ++ H L + + + I +
Sbjct: 121 DKVAPTLAEIISIGLAIGGTFLIATHGELDQLSVTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + + + F + F + F G
Sbjct: 181 KKWGSILVIGVGMVISGVVAIPFTGVLQASIPTSLDFLFAFAGIIIIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+K+ + + ++++A+ + L ++ K+
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMKEQFYAIDFVGMAMILLAVTIISLKDLLLEIKS 300
Query: 312 K 312
K
Sbjct: 301 K 301
>gi|254284564|ref|ZP_04959531.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|150425349|gb|EDN17125.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 341
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 45 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 100
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 101 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 160
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 161 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 220
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 221 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 280
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 281 STAMFMNLLPVFSVSLAATLLGEKVHPYYLIGGLLVISGVALSQLKIQRRN 331
>gi|312869590|ref|ZP_07729741.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
gi|311094876|gb|EFQ53169.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 86/295 (29%), Gaps = 10/295 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH--RVLWSLPGVFFAIVYFSG 76
+G V A WGI+ L+ + L VS + + G+ +
Sbjct: 3 MKNKKALGIAMVITACTFWGISGLFAKGLFNVSSSITSLWVTQSRMTAAGILLVLFSLIK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G + + + L + + + + FV P + +
Sbjct: 63 GDHPFRIFKSPHDTWVIFAYGIFGLVPVQFAYFMVVQYGNASIATILQFVGPFFIIAYQA 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTI 188
F ++II A++ + + + H L+ I+ A
Sbjct: 123 AFRHIPPRRIEIICAIIAFIGVFTIATHGRFNELAVTPAILIWGLISAIGVATNTLIPQK 182
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + V+ + +L + F + +
Sbjct: 183 MLREGRVPSLVITAWGLLFSGIVLLAIHPAQPRVPNLPVVWFCWLGVLIIGTLIPFQLAN 242
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+K +T +M+ PL + SV I + I +V+IA++ +
Sbjct: 243 NALKYIDATTFSLMDAFEPLSATIGSVLIFHLNMTGADIIGSILVIIAVLALNIR 297
>gi|306825499|ref|ZP_07458839.1| DMT superfamily drug/metabolite transporter [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|304432437|gb|EFM35413.1| DMT superfamily drug/metabolite transporter [Streptococcus sp. oral
taxon 071 str. 73H25AP]
Length = 300
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 102/300 (34%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GTL+ A I WG++ Q+L +S L + + R++ + + +
Sbjct: 2 SKTVKGTLYTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLIIAGLALVVLSYMTAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 LYAFLKDR-KSLLSLLLFALFGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILVYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
K +II+ L I ++ H + LS+ +A + + I +
Sbjct: 121 DKVAPTLAEIISIGLAIGGTFLIATHGELDQLSVTLAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + V + + + F + F + F G
Sbjct: 181 KKWGSISVIGVGMVISGVVTLPFTGVLQASIPTSLDFLFAFAGIIIIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+++ + + ++++A+ + L ++ K
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMEEQFYAIDFVGMAMILLAVTIISLKDLLLENKE 300
>gi|152974107|ref|YP_001373624.1| hypothetical protein Bcer98_0265 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152022859|gb|ABS20629.1| protein of unknown function DUF6 transmembrane [Bacillus
cytotoxicus NVH 391-98]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 107/307 (34%), Gaps = 18/307 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G +F A +LWG T++ LE V ++ R+ ++
Sbjct: 2 MKGIGMLFIAILLWGAAIAPTKWALESVQPFTLLFLRLCFAGGICALFSFRQLRE----H 57
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
KN + + S T +A ++ F Y + S + P++++ ++FLKE
Sbjct: 58 FVNKNIFWKRISLLSFTGVAGYFMFTSYGISLTSALHVSIIDAILPLVTIVFSAIFLKEY 117
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIP 189
+ I +L + ++ +T+ S ++ A ++
Sbjct: 118 IRLNYWIGIILGFIGVICITIPSDTNHQEASLIGDILILMSTFLFAFYTILLKKTKQEKL 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + V A+ L + + G F+ + ++
Sbjct: 178 LSNEVFAALTLIVGAVIVLPFAIVEVSYYGLPRITTWKAIMSFIYLVICATILAYWFWNR 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G++ +S G+ PL+ I++S+ +L + + + V++ +
Sbjct: 238 GLEYVSVSVSGLYMNALPLVSIITSIIVLNESLTIKIVVGGCFVLLGVFWADKDKFRIVI 297
Query: 310 KNKTKKS 316
K +K+
Sbjct: 298 KRGNRKN 304
>gi|307308855|ref|ZP_07588543.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
gi|306900660|gb|EFN31272.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
Length = 303
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 86/293 (29%), Gaps = 8/293 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + +++ + + ++L SV +V+ R + + + +
Sbjct: 17 ARAGVVVMLLGMLMFSVNDIMGKWLVATYSVGQVVLIRSIAAALLLAPFLWVSGPKKLF- 75
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ G+ + F +A++ + P+ + + LKE
Sbjct: 76 -----TLERPGLQLARVVASTAEVVAFYFAVVYLPLADVMTYWLAAPIYVAAVSPLVLKE 130
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + A + + +++ S A+ + FA I S G
Sbjct: 131 PVGWRRWTAIGIGFVGVVVALEPSSQAFTLPAVISILGSMTFAFMMISGRSLRGTPDTTL 190
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ V + DT + G + + + +K A +TV
Sbjct: 191 AFWQI-VGAAVAGLVWAPFDWTPLKPLDTALICLLGAVAMIAHVLVNRALKLADAATVAP 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++YT I I I ++V + + + + K
Sbjct: 250 LQYTLLFWAIFFGWLIFGDTPRLSMVIGAALIVASGLFIFFREQQLKRQGRLK 302
>gi|239635882|ref|ZP_04676905.1| integral membrane domain protein [Staphylococcus warneri L37603]
gi|239598506|gb|EEQ80980.1| integral membrane domain protein [Staphylococcus warneri L37603]
Length = 293
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 101/286 (35%), Gaps = 14/286 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
LW + L+ + + + R++ + + F + L +KD
Sbjct: 14 LTIFLWASAFPVIKLALKDFDAIHLSTLRLIIAALVLIFIGLIKKISLPNIKDMPFILLL 73
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ V+ + S TP+ S L ++F KE + + I
Sbjct: 74 GFLG------FTVYHTALSIGEDYVSSGIASLIVSTTPIFSTLLATLFFKEAFSKIAWIG 127
Query: 151 ALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+L+ + + +++L + L +A + F+ + + F + + +
Sbjct: 128 SLIALSGVALISLGNDGQLQFGITGILLVLLASIGESTYFSFQHHYLKKYGFFPLTLYTI 187
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+LF +++ S E I L + +Y I++ +S I
Sbjct: 188 VAGSLFMLLFLPDSILELQSASAISLISVLYLGLFPTVIPYIALAYTIQKVGVSDATISL 247
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y P + ++ S F+L++ + + I++I + + + + N+
Sbjct: 248 YLTPAVSLILSYFLLREIPTFISLVGGVIILIGVTLTTIHSNNNNK 293
>gi|226306806|ref|YP_002766766.1| hypothetical protein RER_33190 [Rhodococcus erythropolis PR4]
gi|226185923|dbj|BAH34027.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 309
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/274 (12%), Positives = 84/274 (30%), Gaps = 6/274 (2%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A ++WG + L+ + LE +S +V+ R+++ + GL K+
Sbjct: 11 AAAVVWGASFLFMKIGLEGLSFTQVVLWRLVFGALALVLVSAVSRIGLPREFRVWKHLAF 70
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ L W + + + V FL L + ++
Sbjct: 71 LAATQCIVPWLLFSWAEQNMSSGLASIYNATTPLMTMAVSLAFLPGETLTRYKSLGLLLG 130
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-----FIEMCVLAI 205
+++ L L G + + + +A + + ++I
Sbjct: 131 FGGVLIVLAPWNLGVGGSVSAQVACLGATASYGISFVYVRRFVLPLGVDTRTVALVQISI 190
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A V+ + L + L F + ++ + + Y
Sbjct: 191 GAFVMVLASPVVANTPMHLTPAVVLSMIALGALGTGLAFIWNTNVVQGWGPTAASTVTYL 250
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+P++ + +L + + + + V+ ++V
Sbjct: 251 SPVVGVALGAIVLDESVGWNQPVGALAVIAGILV 284
>gi|124110760|gb|ABM91739.1| permease [Sphingobium yanoikuyae]
Length = 319
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 88/285 (30%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A + W + P+ + + S L + R + +L V +
Sbjct: 22 VLLLSLASLFWALNPIVGRAARDLLSPLALAFWRWVVALLFVLPFAWRHVVADRRVLRDS 81
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + V ++L + P++++ + S+ ER+
Sbjct: 82 WRL----LAVLGVFGVGVFAFIVYWSLQLTTATNSLLLQSTMPIMTLVMPSILFGERIRP 137
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL-----------AIAVTWSAYCFARKTIPVGSSE 194
L + +A L + ++ + L L +SAY + +P
Sbjct: 138 LLVSSAALSLTGVVWIVTRGQPFALHLGGLNHGDLLALTGVFLYSAYATFLRKVPAIHHI 197
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + L + G L + + F+ +
Sbjct: 198 TLLAVLFAVGMGTLAVPYLVSLADGGVAKPQIEVIGAVLYVGIFPSLIAYAFFNRAVILI 257
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
VG+ + + +V +L + ++T + IV+ A+ V
Sbjct: 258 GSVRVGVYMNLPTVFGVFLAVLLLGERLETYHMVGAAIVLAAIFV 302
>gi|56965287|ref|YP_177019.1| drug/metabolite transporter (DMT) superfamily protein [Bacillus
clausii KSM-K16]
gi|56911531|dbj|BAD66058.1| drug/metabolite transporter (DMT) superfamily protein [Bacillus
clausii KSM-K16]
Length = 288
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 96/272 (35%), Gaps = 10/272 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A ++G L++ + LE++ R L + + ++ + + V
Sbjct: 9 LAMAIFGSIGLFSVK-AGLPSLELVFVRCLCASVMLGAVLLLTNRKGREERPPKSEYGKV 67
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ L ++W FF + + Y + P++ + LGS+ KE+L I +
Sbjct: 68 LLC---GLFLVLNWLFFFRSFEVMPITVAVSIYHLAPLLILLLGSLLFKEKLTWAGIASI 124
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE------MCVLAI 205
++ + L++ +S + A + S G I ++
Sbjct: 125 VICFVGALLVGKAYSHGHVSDFLQTGIGWAFAAAFFYALTSLAGKSITVLSPTKTTLIQT 184
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
++ L LI + VF F ++ ST+ I+ +
Sbjct: 185 MLGAVLLAPLVDWHLFSGLSAENWLFILITGFIHTGVVFYFFFSSLRELPASTIAILVFI 244
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
P++ I+ V +L D ++ + ++ +AM
Sbjct: 245 DPIVAILLDVAVLHYRPDILQLVGILLIFLAM 276
>gi|16265160|ref|NP_437952.1| hypothetical protein SM_b20705 [Sinorhizobium meliloti 1021]
gi|307320315|ref|ZP_07599733.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|15141300|emb|CAC49812.1| conserved hypothetical membrane protein [Sinorhizobium meliloti
1021]
gi|306894037|gb|EFN24805.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
Length = 303
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 86/293 (29%), Gaps = 8/293 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + +++ + + ++L SV +V+ R + + + +
Sbjct: 17 ARAGVVVMLLGMLMFSVNDVMGKWLVATYSVGQVVLIRSIAAALLLAPFLWVSGPKKLF- 75
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ G+ + F +A++ + P+ + + LKE
Sbjct: 76 -----TLERPGLQLARVVASTAEVVAFYFAVVYLPLADVMTYWLAAPIYVAAVSPLVLKE 130
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + A + + +++ S A+ + FA I S G
Sbjct: 131 PVGWRRWTAIGIGFVGVVVALEPSSQAFTLPAVISILGSMTFAFMMISGRSLRGTPDTTL 190
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ V + DT + G + + + +K A +TV
Sbjct: 191 AFWQI-VGAAVAGLVWAPFDWTPLKPLDTALICLLGAVAMIAHVLVNRALKLADAATVAP 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++YT I I I ++V + + + + K
Sbjct: 250 LQYTLLFWAIFFGWLIFGDTPRLSMVIGAALIVASGLFIFFREQQLKRQGRLK 302
>gi|298373718|ref|ZP_06983707.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298274770|gb|EFI16322.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 299
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 90/290 (31%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + A + +G PL L + V+ +R + ++
Sbjct: 2 NTKVKGYIAGILAAVFYGTNPLGALPLYDHGFTSGNVLFYRYGLATIFFAVWMLIRKEKF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S+ + + A+ + L + S F P+++ L +F
Sbjct: 62 SISRGYAIKFSL------LGAMFALSSILLFASFLFMNAGVASTILFSYPIMTAMLMVIF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
+E + + +I+ L I + ++ G LL L ++ ++ Y K +
Sbjct: 116 YREHITTITVISLALAIGGIGLLYRGDGQETLSVTGVLLVLGSSLLFAIYIVYAKQFKIK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + + I ++ + + I
Sbjct: 176 MSPVKSTFWIIFFGWIVIVGYMFFTGDSVQLPRQPIEWGCIVLLALMPTLLSLYFLNISI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + I+ P+ +V S F+ +P I +++ A+++ +
Sbjct: 236 QNIGSTLSSILGALEPVTAVVISTFVFGEPFTVRLAIGIVLILSAVLLII 285
>gi|293365139|ref|ZP_06611856.1| DMT superfamily drug/metabolite transporter [Streptococcus oralis
ATCC 35037]
gi|307702156|ref|ZP_07639116.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291316589|gb|EFE57025.1| DMT superfamily drug/metabolite transporter [Streptococcus oralis
ATCC 35037]
gi|307624169|gb|EFO03146.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 301
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 102/301 (33%), Gaps = 10/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GTL+ A I WG++ Q+L +S L + + R++ + + F +
Sbjct: 2 SKTVKGTLYTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLIIAGLALVFLSYTTAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 LYAFLKDR-KSLISLLLFAVFGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILVYTCMK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K +II+ L I ++ H L + + + I +
Sbjct: 121 DKVAPTLAEIISIGLAIGGTFLIATHGKLDQLSVTPAGLFWGLFSALTYALYIILPIVLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + + + F + F + F G
Sbjct: 181 KKWGSILVIGVGMVISGVVAIPFTGVLQASIPTSLDFLFAFAGIIIIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+K+ + + ++++A+ + L ++ K+
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMKEQFYAIDFVGMAMILLAVTIISLKDLLLEIKS 300
Query: 312 K 312
K
Sbjct: 301 K 301
>gi|59801850|ref|YP_208562.1| hypothetical protein NGO1512 [Neisseria gonorrhoeae FA 1090]
gi|194099322|ref|YP_002002420.1| Tou6 [Neisseria gonorrhoeae NCCP11945]
gi|240081157|ref|ZP_04725700.1| Tou6 [Neisseria gonorrhoeae FA19]
gi|240126270|ref|ZP_04739156.1| Tou6 [Neisseria gonorrhoeae SK-92-679]
gi|240128782|ref|ZP_04741443.1| Tou6 [Neisseria gonorrhoeae SK-93-1035]
gi|268597268|ref|ZP_06131435.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268684853|ref|ZP_06151715.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268687164|ref|ZP_06154026.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|59718745|gb|AAW90150.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|193934612|gb|ACF30436.1| Tou6 [Neisseria gonorrhoeae NCCP11945]
gi|268551056|gb|EEZ46075.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268625137|gb|EEZ57537.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268627448|gb|EEZ59848.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 291
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/282 (10%), Positives = 84/282 (29%), Gaps = 17/282 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+WG + + +++ + ++ R+L + A +
Sbjct: 1 MFYQILALIIWGSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 54 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 114 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 174 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G++ P++ ++ +V IL + + V + +V+ A
Sbjct: 234 NASGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATF 275
>gi|260551515|ref|ZP_05825699.1| permease [Acinetobacter sp. RUH2624]
gi|260405509|gb|EEW99002.1| permease [Acinetobacter sp. RUH2624]
Length = 314
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/294 (19%), Positives = 122/294 (41%), Gaps = 5/294 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSL 80
+ G +F A + +G+ YTQ L Q+ + R++ +LP + + + S ++
Sbjct: 2 LKGVIFSVMASLTFGVLYFYTQLLGQLDSEQTFGWRIIATLPFLTLFMWWSGDLSHIKNI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV
Sbjct: 62 YQRILAKPSLLLLLITTSILTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ Q +A +L I+ + G A+ + F + + G F
Sbjct: 122 EKISKFQWVAIILAIVGVGHEIFRLGSIAWETALVAIGYSAYFLLRKKIKTDNLGGFWWD 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ +P Y+ G F L + G G+L++ + + L G
Sbjct: 182 LLIIMPVAIYLTHTGLL-PYSKFFDQPTLALVIAGLGVLSAIGLGCYILASRFLPLVVFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P+L+ ++ +L + I + + A+ V +L + + + K
Sbjct: 241 LLGYLEPVLLALA-SLVLGESIGQEEWFTYIPIWCAVFVLVLEGAFHLYQQQKK 293
>gi|229590457|ref|YP_002872576.1| hypothetical protein PFLU2996 [Pseudomonas fluorescens SBW25]
gi|229362323|emb|CAY49225.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 332
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 91/282 (32%), Gaps = 20/282 (7%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG T + ++L + V L S R + + + GG + +A
Sbjct: 42 TMIWGGTFVAGRYLSEAVDPLLAASLRFCLASLALLVFM----GGARIPLARPNPRQAAQ 97
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+LV + + F Y L S + P + KERLN ++++
Sbjct: 98 LLVLGFFGIFFYNLCFFYGLQYTNASRASLIVALNPAVIGLASWWLFKERLNGIKVMGIA 157
Query: 153 LIILSLLIMT--------------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L + ++ + + + + +G +
Sbjct: 158 LCLAGAAVVIISRNPQLLGEGAGNWRGDLLIFGCVVGWGIYSLFSRELNQSLGPLQTVTW 217
Query: 199 EMCVLAIP-ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + ++ FS L L L ++ + + GI+R +
Sbjct: 218 SILLGTLMLTVTSLITGRFSVEAIGQLHFSQVMSLLYLGVLGSALAYIGYYDGIRRIGAT 277
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+ PL ++ +L + + I ++++ + +
Sbjct: 278 RSGVFIALNPLTAVIFGALLLSEQLTAPMLIGGAVILLGIYL 319
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 14/131 (10%), Positives = 42/131 (32%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
F + + + +L +V+ G + L
Sbjct: 40 AVTMIWGGTFVAGRYLSEAVDPLLAASLRFCLASLALLVFMGGARIPLARPNPRQAAQLL 99
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ F F YG++ S ++ P ++ ++S ++ K+ ++ ++ + +
Sbjct: 100 VLGFFGIFFYNLCFFYGLQYTNASRASLIVALNPAVIGLASWWLFKERLNGIKVMGIALC 159
Query: 294 VIAMVVYLLPT 304
+ V ++
Sbjct: 160 LAGAAVVIISR 170
>gi|255306492|ref|ZP_05350663.1| hypothetical protein CdifA_07867 [Clostridium difficile ATCC 43255]
Length = 314
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 15/307 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV 72
KE A L G + + I+WG + TQF ++ L++I+ R + +
Sbjct: 5 KKEGALLKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFF 64
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + L + + L+ +F VI
Sbjct: 65 -------KQIRANMCKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVP 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTI 188
F+G + + +L+ + II++L+ ++ + I++L + + I A+ +
Sbjct: 118 FIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSE 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L VV F+G + + F +
Sbjct: 178 FAKDNNPMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQT 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
KR + I+ T + + S+ ILK+ I I ++ + + T ++
Sbjct: 238 ICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLVIGSILIF--VAIITAETKLSF 295
Query: 309 GKNKTKK 315
K+K K
Sbjct: 296 LKSKKVK 302
>gi|218901776|ref|YP_002449610.1| transporter, EamA family [Bacillus cereus AH820]
gi|218538720|gb|ACK91118.1| transporter, EamA family [Bacillus cereus AH820]
Length = 308
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTIVVIGWGMLMGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQ 296
>gi|153808676|ref|ZP_01961344.1| hypothetical protein BACCAC_02975 [Bacteroides caccae ATCC 43185]
gi|149128502|gb|EDM19720.1| hypothetical protein BACCAC_02975 [Bacteroides caccae ATCC 43185]
Length = 303
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 94/297 (31%), Gaps = 13/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ++ A +G+ PL+T + +SV V+ +R +++ + +
Sbjct: 2 NSKTKGFIYGAIAAASYGMNPLFTLPLYAAGMSVDTVLFYRYFFAVIVLGILMKMQHQSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K + +++ F+ G ++ + +++V +G+ F
Sbjct: 62 ALRKADIL-----PLVIMGLLFSFSSLLLFMSYNYMDAGIASTILFVYPVMVAVIMGAFF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV------TWSAYCFARKTIPVGS 192
++ L + L+ G PL ++ I +++ Y + +
Sbjct: 117 KEKISAITVFSILLALAGIALLYQGDGGKPLSTIGIIFVLLSSLSYAIYIVGVNRSTLKN 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + Y+V F L L + + I
Sbjct: 177 LSTTKLTFYAILFGLSVYIVRLNFLTDLQVIPTAWLWGDVLALAILPTAVSLVCTALAIH 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ P+ + V + + + + +++ A+ + ++ +
Sbjct: 237 YIGSTPTAILGALEPVTALFFGVLLFHEKLTPRLMVGILMIITAVTLIIIGKSLIKK 293
>gi|260171819|ref|ZP_05758231.1| hypothetical protein BacD2_08138 [Bacteroides sp. D2]
gi|315920131|ref|ZP_07916371.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694006|gb|EFS30841.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 306
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 102/300 (34%), Gaps = 18/300 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF A ++WG+ + L++ S + V + R++ + + ++
Sbjct: 3 KSKNLHGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWLLSIFCKQ-- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + S L + G FI+ L S P++++ + +++
Sbjct: 61 ----EHVDHRDMLKIFFASLFALVFNQGVFIFGLSMTSPIDASIVTTTLPIVTMVVAAIY 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKT 187
LKE + + +++ + + LI+ + S G L +A +
Sbjct: 117 LKEPVTNKKVLGIFVGAMGALILIVSSQAGNNGNGSLIGDLLCLVAQISFSIYLTVFKGL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S+ M + A + S + + + L + +
Sbjct: 177 SQRYSAVTINKWMFIYASICYIPFSYYDISTIQWASISTVAILQVLYVVLGGSFLAYLCI 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
K + + V + Y P++ ++++ + + I +V + + +
Sbjct: 237 MTAQKLLRPTVVSMYNYMQPIVATIAAITMGIGSFGWEKGIAIALVFLGVYIVTQSKSRA 296
>gi|312110785|ref|YP_003989101.1| hypothetical protein GY4MC1_1716 [Geobacillus sp. Y4.1MC1]
gi|311215886|gb|ADP74490.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y4.1MC1]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 97/302 (32%), Gaps = 14/302 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + V LWG++ + Q L +Q++ ++ R++ + +
Sbjct: 6 SNRAKGLMMVITGAALWGLSGIAAQVLFQEKQITAQWLVVVRMMMAGSALLL--FAVCKW 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+++ V +L+F + + ++ T + + ++ PV V V
Sbjct: 64 MTIFSIWRDGKSIVRLLLFGLIGMLGVQYTYFASIATGNAAIATLLQYLAPVYVVLYDIV 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS---------AYCFARKTI 188
+ R ++A +L +L ++ + L + +A Y + +
Sbjct: 124 AKRHRPAKEVMLAVILALLGTFLLITNGSTGELKVPLASVGWGILSGIALAFYTLSSAQM 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ ++ +V+ F E L L F F +F
Sbjct: 184 LKKWDSIIIVGWGMVIGGGGMCLVFPPFPLPEAVRWDEETWLLILFVVVFGTLFAFLLFV 243
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ + ++ PL I++S+ L P + I V+ + +
Sbjct: 244 ESIRYLSPAESSVLSSVEPLSSIIASIAFLHVPFSLFQAIGAVCVIATVFLLSSKKEKQL 303
Query: 309 GK 310
+
Sbjct: 304 SQ 305
>gi|241761844|ref|ZP_04759930.1| protein of unknown function DUF6 transmembrane [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|260752604|ref|YP_003225497.1| hypothetical protein Za10_0362 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|241373758|gb|EER63318.1| protein of unknown function DUF6 transmembrane [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|258551967|gb|ACV74913.1| protein of unknown function DUF6 transmembrane [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 296
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/276 (13%), Positives = 84/276 (30%), Gaps = 12/276 (4%)
Query: 32 CAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A +W + + + + + + R W+L +S + L++
Sbjct: 14 LAAFMWASNFVIGRIIPPSMPPVSLSFWR--WALAACILLPFVWSSLKKEWRVVLRHWPI 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L + A Y L + + TPV+ + E+ + +I+A
Sbjct: 72 ILLLGTTGQ--AGSNTLAYYGLHSTGATVALLIQSATPVVILLFAFFLYGEKPSPKRIVA 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT-------IPVGSSEGFFIEMCVL 203
L +L + G + I T + +
Sbjct: 130 MLFAFGGILFVIAAKGNGGAASTIGGTLLLTATMLCQALYATILRHKPPTTPLVLLFSCF 189
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+L + + G F + + + + F F F+ G+ S I
Sbjct: 190 VAASLVLLPFQIPYGVGLPFHDSHSLSAIIYLAIGPSIFAFLFFNRGVHIIGASRASIFL 249
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P+ + +V L + + + F +V + V+
Sbjct: 250 YLMPVFGSLIAVPFLGERLGWMHLTGFLLVGVGFVL 285
Score = 43.4 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 47/137 (34%)
Query: 165 SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL 224
++L++A A F I S + A+ A + + S + + +
Sbjct: 5 WNNAWITLSLAAFMWASNFVIGRIIPPSMPPVSLSFWRWALAACILLPFVWSSLKKEWRV 64
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
+ L+ + + YG+ + +++ P+++++ + F+ +
Sbjct: 65 VLRHWPIILLLGTTGQAGSNTLAYYGLHSTGATVALLIQSATPVVILLFAFFLYGEKPSP 124
Query: 285 VRTIVFGIVVIAMVVYL 301
R + ++ +
Sbjct: 125 KRIVAMLFAFGGILFVI 141
>gi|221212317|ref|ZP_03585294.1| membrane protein [Burkholderia multivorans CGD1]
gi|221167416|gb|EED99885.1| membrane protein [Burkholderia multivorans CGD1]
Length = 329
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 76/281 (27%), Gaps = 6/281 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L+ + R L + + + + + L ++P +
Sbjct: 43 IWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLNFNAASRAQLAAIRRDPALLLPG 102
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
V +LAV L + F V+ V L VF + R+ ALL
Sbjct: 103 VALGALLAVSISLQQVGLQYTRIANAGFI-SSLYVVIVPLMGVFARHRIGVGTWFGALLA 161
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A + + +
Sbjct: 162 AIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHLAKRHDPLVLAFLQFVVCGALC 221
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ + L G L + + + A + ++ +
Sbjct: 222 LAVGIAVEPVSVAMLRGALPTVLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 281
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V+ L + + + +++ ++ L ++ K
Sbjct: 282 AVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKK 322
>gi|311070281|ref|YP_003975204.1| putative transporter [Bacillus atrophaeus 1942]
gi|310870798|gb|ADP34273.1| putative transporter [Bacillus atrophaeus 1942]
Length = 296
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 89/286 (31%), Gaps = 12/286 (4%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV A WG T E+ + L + R+L + + +K
Sbjct: 8 LFVLAAAFFWGTTGTVQALAPEESTPLAFGAIRLLIGGSAMLLVVFISGK------LDVK 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + + + FF T T + PVI+ L K+R
Sbjct: 62 NWSWRLVFLAAVCMACYQPFFFTAVKETGIAVGTVIAIGSAPVIAGSLEWAVFKKRPQKS 121
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
A +L + ++ S + L + S + + + ++
Sbjct: 122 WWAATVLALAGCWLLFADSSAVHVELTGVILALGAGASFAGYTLISKSLIKTQPPEASAA 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ + + + + L + L + + +F+ G+ S
Sbjct: 182 VIFMISALLLSPLLLQEDTSWILTGRGAGVSLYIGIIATCAAYFMFTKGLTAVPASAAVT 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ PL + VF + + + I ++++ ++V + +
Sbjct: 242 LSLAEPLTAALLGVFFIGEMLTLSSWIGIALMLLGLLVISVSPRKH 287
>gi|94498970|ref|ZP_01305508.1| Predicted permease, DMT superfamily protein [Oceanobacter sp.
RED65]
gi|94428602|gb|EAT13574.1| Predicted permease, DMT superfamily protein [Oceanobacter sp.
RED65]
Length = 280
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 86/279 (30%), Gaps = 8/279 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L + L I + L ++ ++ +R L+ L + + +
Sbjct: 1 MPNQVLQGALLILVGEALLAIMGAIIKHLSQELPTELIVFYRNLFGLFMLAPLLYHNG-- 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + A + F Y + TP + +
Sbjct: 59 -----LSSLKTHRIHLHLLRAAVGLTAMYGFFYVIAHMPLAEAFLVKLTTPFFLPIIAGI 113
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L E ++ I+A ++ + ++ + +A+ +A+ + +
Sbjct: 114 WLAESISRRNIVAIIIGFIGVVFILKPGTENFTPVALIGLGAAFLAGAAKVCIRKMGNTE 173
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ A + + + +++ G++ + + + A
Sbjct: 174 SSVSIVFYFAAISSLLSVIPLFWAWQWPQAHHWPWIVLMGIVATMGQLALTRAYRIANPG 233
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+G Y++ + + + + I +VIA
Sbjct: 234 QIGPYVYSSVIYGASLGWIVWGETLLISTLIGSAFIVIA 272
>gi|300769273|ref|ZP_07079160.1| transport protein [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|300493047|gb|EFK28228.1| transport protein [Lactobacillus plantarum subsp. plantarum ATCC
14917]
Length = 305
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 99/292 (33%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ M G ++ A LWG++ QF+ Q + +S R L S + AI +
Sbjct: 5 TTNRYMKGIMWAMLASTLWGVSGTVMQFVSQNQAIPADWFLSVRTL-SAGIILLAIGFVQ 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + K ++ ++ L + F ++ + +++P+ V
Sbjct: 64 QGTKIFKVFRSWASVGQLVAYATVGLMANMYTFYISIERGTAAAATILQYLSPLFIVLGT 123
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTI 188
+F +E +IA + +L + + + L I +A +
Sbjct: 124 LLFKRELPLRTDLIAFAVSLLGVFLAITKGNIHELAIPMDALVWGILSGVTAALYVVLPR 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + A + T + F F
Sbjct: 184 KIVAENSPVVILGWGTLIAGILFNLYHPIWIGAPKITPTLVTSIGAIVLIGTIFAFLSLL 243
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ ++ A + V I++ P++ V S+ L + V + +V++A+ +
Sbjct: 244 HSLQYAPSAVVSIVDAVQPVVTFVLSIIFLGLQVTWVEILGSLLVIVAIYIL 295
>gi|323339987|ref|ZP_08080254.1| DMT superfamily drug/metabolite transporter [Lactobacillus ruminis
ATCC 25644]
gi|323092629|gb|EFZ35234.1| DMT superfamily drug/metabolite transporter [Lactobacillus ruminis
ATCC 25644]
Length = 295
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 97/287 (33%), Gaps = 9/287 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + + WGI+ + Q L + V L ++ R+L + + + +
Sbjct: 2 SKRNQGIMLAIIGTMFWGISSPFAQALFAQNVKPLWLVGARLLLAGI-LLSVWGFIATDK 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K+ K + +++F+ + F A+ + F+ PV + ++
Sbjct: 61 EQHKEIFKKKNLILLILFAVFGMVPSQLTFFLAIRYGNASTATILQFLGPVFIIVCLAIQ 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ + +I+ ++ +L + + + I L+L+ A + +
Sbjct: 121 YRKLPPRIDVISLMIAVLGTIFVVTNGKIGTLALSAAGIFWGIMAGVSQASYTLIPRRLL 180
Query: 199 E------MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + L + + W + + F + + +K
Sbjct: 181 EQFDARLVTGLGMFIGSVLFWPLILTTKIPSITPFTVGSFAYIIIFGTMASYLCYLQSVK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
ST G++ PL V SV + + T +T+ +++ +
Sbjct: 241 YIPASTTGMLSAFEPLTANVLSVLWFHETLGTFQTVGAVLILSTAFL 287
>gi|295111342|emb|CBL28092.1| Predicted permease, DMT superfamily [Synergistetes bacterium SGP1]
Length = 313
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 94/274 (34%), Gaps = 13/274 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ WG + L + LE + L +I+ R + + + A+++ TL++
Sbjct: 27 LVAMAWGSSYLLMKMGLEGIPPLSMIALR--FGIAFLTVALIFARQLRRTTSRTLRHGAI 84
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
L + F +Y L T F T V L ++F ++ + ++
Sbjct: 85 ------LGLFLFGLFAFLMYGLRTTSASAAGFLTSATVVFVPLLQAIFRRKAPDAATVVG 138
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTW----SAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ + ++TL + L + A I +G + + LA
Sbjct: 139 TAAVMSGIGLLTLRDAMTLQWGELLCLGGALLYACQILLTDIFTHQEDGLLLGVWQLAFA 198
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
AL V + + L L ++F F + + G++
Sbjct: 199 ALLGFVASLLLEVPAWPANAAQWAAVLGLALLCSAFGFVLQPVAQRYTTPEHAGLLFAME 258
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
P+ + + L++ +D +++++++
Sbjct: 259 PVFSALLAFLFLRETLDARGYAGAALILLSVLFV 292
>gi|17987606|ref|NP_540240.1| transporter, DME family [Brucella melitensis bv. 1 str. 16M]
gi|254701412|ref|ZP_05163240.1| hypothetical protein Bsuib55_11219 [Brucella suis bv. 5 str. 513]
gi|260545659|ref|ZP_05821400.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563674|ref|ZP_05834160.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260566794|ref|ZP_05837264.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260754386|ref|ZP_05866734.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260757605|ref|ZP_05869953.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761431|ref|ZP_05873774.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883411|ref|ZP_05895025.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261213632|ref|ZP_05927913.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261315161|ref|ZP_05954358.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317283|ref|ZP_05956480.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261324740|ref|ZP_05963937.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261751951|ref|ZP_05995660.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261754609|ref|ZP_05998318.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261757838|ref|ZP_06001547.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265988321|ref|ZP_06100878.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265990732|ref|ZP_06103289.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994570|ref|ZP_06107127.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265999553|ref|ZP_05466877.2| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|306842112|ref|ZP_07474782.1| transporter, DME family [Brucella sp. BO2]
gi|306845224|ref|ZP_07477800.1| transporter, DME family [Brucella sp. BO1]
gi|17983314|gb|AAL52504.1| transporter, dme family [Brucella melitensis bv. 1 str. 16M]
gi|260097066|gb|EEW80941.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153690|gb|EEW88782.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260156312|gb|EEW91392.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260667923|gb|EEX54863.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671863|gb|EEX58684.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674494|gb|EEX61315.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872939|gb|EEX80008.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915239|gb|EEX82100.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261296506|gb|EEY00003.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261300720|gb|EEY04217.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261304187|gb|EEY07684.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737822|gb|EEY25818.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261741704|gb|EEY29630.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261744362|gb|EEY32288.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262765683|gb|EEZ11472.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001516|gb|EEZ14091.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094619|gb|EEZ18417.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264660518|gb|EEZ30779.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|306274383|gb|EFM56190.1| transporter, DME family [Brucella sp. BO1]
gi|306287785|gb|EFM59213.1| transporter, DME family [Brucella sp. BO2]
gi|326408644|gb|ADZ65709.1| transporter, DME family [Brucella melitensis M28]
gi|326538365|gb|ADZ86580.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 319
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 14/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 16 MNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWRG 70
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 71 QLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAILH 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 131 EVVRFYRWSAVLIGLFGVMIIIWPRLTLFSAGSVGRDEAVGALAALGAAVMSAVAMMLVR 190
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ ++ V S + + N L+G G + +
Sbjct: 191 RLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTECY 250
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 251 RHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 303
>gi|126464778|ref|YP_001045891.1| hypothetical protein Rsph17029_4041 [Rhodobacter sphaeroides ATCC
17029]
gi|126106589|gb|ABN79119.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17029]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 82/292 (28%), Gaps = 2/292 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L V A +LWG L + L V + R+ + + +
Sbjct: 8 LLCVILAAVLWGTAGTVQSLLPSEREPLVVAAIRLAVGATILTLMALRLPENRRAFRRLP 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQG-FLTSFSYFVTPVISVFLGSVFLKERLN 144
P V L L + + S +VT + L + R
Sbjct: 68 WRPVLVAGLAIGLYNLLFFVAVTQAGVGVGTAIAIGSAPVWVTLYEAAVLRRLPTGVRAA 127
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +L + + +LA A + ++ T VG+
Sbjct: 128 GQVLSVLGAALLVAGAGAGSASLTGAALAAAAGAAYATYSVATSRVGAQVPSDTLAAATF 187
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ F + L + + +F+ G+ ST +
Sbjct: 188 GVAMLLAAPALFLLPVSWVADLRAWPALLFLGAVTTGVAYALFTRGLAGLATSTAVTLSL 247
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
PL + ++ +L + + R + ++ + + L + + ++
Sbjct: 248 VEPLTAWILAIVVLGEAVTAQRLLGAALLFAGLAIVTLAPARPAVRATRGEN 299
>gi|228906328|ref|ZP_04070213.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis IBL
200]
gi|228853351|gb|EEM98123.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis IBL
200]
Length = 308
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 104/294 (35%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ +++FS + FI + + F+ PV+ +
Sbjct: 65 QIWKHPR--YSIQLIIFSILGMLGAQYAFIETVHISNAVTATLFQFLGPVLITVYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 183 ECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVATIVSITWLNEAFGVYQLLGGVCIVLSVIFLTMPQ 296
>gi|15807383|ref|NP_296114.1| hypothetical protein DR_2393 [Deinococcus radiodurans R1]
gi|6460210|gb|AAF11939.1|AE002070_1 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 304
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 83/288 (28%), Gaps = 4/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + +WG T + L + + +++ R +
Sbjct: 2 TSHLRGILLLLLVTAIWGSTFAVVKELGALLAPPVLLAWRFSIGALVLLPLAALRRTPAP 61
Query: 80 LLKDTLKNPK-AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ T + + L +G AL T +F ++ V+ ++
Sbjct: 62 TVTVTQADGTSLWSDGMVLGLWLIAGYGTQTIALQTTTANRAAFFTALSVVLVPVWLTLV 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--LLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ R+ + A L + L +++ G + A+A + F + S
Sbjct: 122 QRRRMPAVLWAALPLAVAGLALLSWEGGAWVSGDAWALACAVTYAGFILALEKLASRHAA 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ G + + + + + G +
Sbjct: 182 LPFTLAQVLSVALVAWGWALLSGAPLWPPQAAWAPLFYLGVVATAGTTLLQTLGQRHVSA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ P+ + S ++ + + + +VV+A V+
Sbjct: 242 AEASLIYALEPVSAALFSFALIGERVGARGALGGALVVLATVLSSRAG 289
>gi|295399965|ref|ZP_06809945.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
gi|294977744|gb|EFG53342.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 96/293 (32%), Gaps = 14/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + V LWG++ + Q L +Q++ ++ R++ + +
Sbjct: 6 SNRAKGLMMVITGAALWGLSGIAAQVLFQEKQITAQWLVVVRMMMAGSALLL--FAVCKW 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+++ V +L+F + + ++ T + + ++ PV V V
Sbjct: 64 MTIFSIWRDGKSIVRLLLFGLIGMLGVQYTYFASIATGNAAIATLLQYLAPVYVVLYDIV 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS---------AYCFARKTI 188
+ R ++A +L +L ++ + L + +A Y + +
Sbjct: 124 AKRHRPAKEVMLAVILALLGTFLLITNGSTGELKVPLASVGWGILSGIALAFYTLSSAQM 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ ++ +V+ F E L L F F +F
Sbjct: 184 LKKWDSIIIVGWGMVIGGGGMCLVFPPFPLPEAVRWDEETWLLILFVVVFGTLFAFLLFV 243
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + ++ PL I++S+ L P + I V+ + +
Sbjct: 244 ESIRYLSPAESSVLSSVEPLSSIIASIAFLHVPFSLFQAIGAVCVIATVFLLS 296
>gi|257454388|ref|ZP_05619650.1| RarD protein [Enhydrobacter aerosaccus SK60]
gi|257448154|gb|EEV23135.1| RarD protein [Enhydrobacter aerosaccus SK60]
Length = 325
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/296 (21%), Positives = 132/296 (44%), Gaps = 4/296 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVL-WSLPGVFFAIVYFSG 76
A+ G + + +L+G+ LY+ +L +S +V R++ V V S
Sbjct: 25 TATKKLRFGVVLALISNVLFGVVYLYSHWLAPLSGTQVFLWRMVAMWFGLVGLLAVTQSF 84
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G N + +L+ ILA F++A + Q T+ YF+ P++ V +G
Sbjct: 85 GQLKTFLMGLNKQQWVLLLLPTPILASQLWLFMWAPINGQAVNTAMGYFLLPLMMVLMGC 144
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V KE LN LQ A ++ + + + ++ + +T+ Y R+ V + G
Sbjct: 145 VVFKETLNRLQWAAIIVAAAGVGLQFWLAGSVSWVTAWVCLTYPIYYGLRRWQGVPALMG 204
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F+++ V+A +L +++W S + LIG G++++ +
Sbjct: 205 LFVDLSVIAPISLGFLLWQNTSVSIVTGSITMGL--LLIGLGMISALAMQTNLKASQVLP 262
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++T G++ Y P LM + S+F+L + ++ F ++ + +++ ++ + S K+
Sbjct: 263 MNTFGMLSYLEPALMFLLSIFVLHEAVNGTMIASFSLIWVGVLLMIVNAIRVSKKS 318
>gi|194902044|ref|XP_001980561.1| GG18167 [Drosophila erecta]
gi|190652264|gb|EDV49519.1| GG18167 [Drosophila erecta]
Length = 347
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 88/292 (30%), Gaps = 13/292 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L + + + + + + L V+ +E+ S R + L ++Y + +
Sbjct: 38 LGILLATLSSLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPTLPILIYTRQ--PVFPEG 95
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + ++ + F L + S FV FL +
Sbjct: 96 KRVILLLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCTLFNVL 155
Query: 145 HLQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + +++++ +A + + +
Sbjct: 156 TINMTLLGVVLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISSTLFGANVYILLRALKN 215
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F + M AL Y + S G + D ++ G+ + + + ++
Sbjct: 216 LHFSVIMTNFGAIALVYTLIVCGSIGAVCWPSCGRDRWLVVVLGMFSFLGQILLTLSLQI 275
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ V I + V + + + +V+ ++V+ L
Sbjct: 276 EQAGPVAIARCADIVFAFVWQMLFFGETPTAYSLVGAVMVMGSVVLTALKKW 327
>gi|90579489|ref|ZP_01235298.1| hypothetical protein VAS14_00966 [Vibrio angustum S14]
gi|90439063|gb|EAS64245.1| hypothetical protein VAS14_00966 [Vibrio angustum S14]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 97/304 (31%), Gaps = 23/304 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+++ T+ V A + WG + + + VL + R +L +F +
Sbjct: 13 NTSLIATIGVLAAAVFWGTSFGVAKESMLYTGVLMFLVIRFCCTLLVIFPLV-------- 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
N + L + IL++ + Y L +F + + + + ++F
Sbjct: 65 ---SKKLNKQIWLQLAPTGGILSIIYLAETYGLKHTTASNAAFLISLFIIFTPAVDALFN 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARKTI 188
+ +L + A + I + ++ S + A
Sbjct: 122 RHKLAVTDLFAGCIAIAGVWLLVGDSLNTVTFNIGNILILIAAMGRAAFVVTTKKKMNQQ 181
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
FI++ V+ + + +V+ F F +
Sbjct: 182 HCDPMVATFIQLSVVTVVCISLLVFTVPVEQFIIPSAPEFWLYIGYLVIFCTLFAFYFQN 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
YG+K + V + P+ + + + L + + ++ + G++V+A + + S
Sbjct: 242 YGVKHTSPTQVSFLLGLEPVFGGLFAHWWLGERFEQLQWVGAGLIVLAAMFISVKPKFFS 301
Query: 309 GKNK 312
K
Sbjct: 302 RTKK 305
>gi|29832516|ref|NP_827150.1| hypothetical protein SAV_5973 [Streptomyces avermitilis MA-4680]
gi|29609635|dbj|BAC73685.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 329
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/270 (11%), Positives = 69/270 (25%), Gaps = 5/270 (1%)
Query: 34 YILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+LWG L+ + +S ++ R + + L + T
Sbjct: 15 ALLWGSGFLWIKLALNHGLSPAQITITRCALGTLVLLALARRSAQRLPRDRATWARLAVA 74
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+L + G + + I V LG+ + L ++
Sbjct: 75 ALLCNAVPFALFSVGEQTVDSGVAGVLNATTPLWSLL-IGVLLGTDRVLHPLRLTGLVLG 133
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
L + SG+ + +A G M V A L
Sbjct: 134 FAGTLLIFAPWHRSGLMSWGALALLGAAASYAVAFAYMARKLTGRGAPMAVSAAQLLMAT 193
Query: 212 VWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
W+ + + F + I ++ + Y P++
Sbjct: 194 AWSTLALPAAGPVHADATALLAVTVLGVFGTGVTFYLNYRLIADEGPTSAATVGYLLPVV 253
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +L + I +V+ + +
Sbjct: 254 SVALGALVLGETIGLRVLAGMAVVLAGVAM 283
>gi|325293558|ref|YP_004279422.1| membrane protein [Agrobacterium sp. H13-3]
gi|325061411|gb|ADY65102.1| membrane protein [Agrobacterium sp. H13-3]
Length = 300
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 82/285 (28%), Gaps = 10/285 (3%)
Query: 36 LWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + + + + R + V + + + +G
Sbjct: 16 IWGGGFVAQSSAMASIGPFWFVGLRFAIAAIAVLPFALMENRSKKSPP----RRREIGGF 71
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ L LLT +SF + + + V + + + AL++
Sbjct: 72 ILVGLALFGGATTQQVGLLTTTVTNSSFLTGLYVIFVPVIAVVLYRRHPHWIVWPGALMM 131
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPALF 209
+ + +++ + L I A+ +A + G + AI +L
Sbjct: 132 LGGIFLLSGGAFEALTQGDILSIICAFFWAIQITLAGRFVSESGRPLALSCTQFAICSLL 191
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ L + + F + + I + L
Sbjct: 192 SCMIGLAVEPISMASIEGSLAEILYVGLVSSGLAFVLQVVAQRYTTAPQAAIFLSSEALF 251
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + L + I + I I+ A+++ L + + KT
Sbjct: 252 GALLASIFLNETISSAGYIGCVIIFAAILIVELVPELTRKRQKTA 296
>gi|229065841|ref|ZP_04201040.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
AH603]
gi|228715426|gb|EEL67255.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
AH603]
Length = 313
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 105/286 (36%), Gaps = 18/286 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFNELQKAVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ M + S T +A ++ F Y + G S P++++ + FLKE +
Sbjct: 64 KHIPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEEIQP 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLLITISSNNADQEVSLIGDILILLSTFLFAFYTVLLKQPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + ++ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGSVILLPFAMVETFYYGFPKIETWKTGLSVMYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
R S G+ PL+ IV+S+ +L + + I G+V+ +V
Sbjct: 244 RVSASVSGLYLNALPLISIVASIVLLNESLTWRIVIGGGLVLFGVV 289
Score = 41.4 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFNELQKA 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+IP + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKHIPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEE 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I +++ + +
Sbjct: 121 IQPNYWIGIILGAIGVLLITISS 143
>gi|15603146|ref|NP_246218.1| hypothetical protein PM1281 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|24212627|sp|Q9CLF4|Y1281_PASMU RecName: Full=Uncharacterized transporter PM1281
gi|12721641|gb|AAK03365.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 291
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/292 (17%), Positives = 130/292 (44%), Gaps = 8/292 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L A +L+G ++ L+ + ++ R++++LP V A+ F ++ +
Sbjct: 2 IKGILLSLSASVLFGYLYYFSTLLQPLGGEDIFGFRIIFTLPFVIAAVFLFKQKQAVGQY 61
Query: 84 TLKNPKAVGMLVFSAT---ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ + ++ ++ + F++A SF Y + P+ V +G + K
Sbjct: 62 FVRIKQQPLLIFGFLFNSAMMGIQIWLFLWAPNNGSALSVSFGYLLLPLTMVLVGRLVFK 121
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E ++ ++ +A ++ + + + L G+ +L ++ +S Y RK + + GF +E
Sbjct: 122 EHISRVKFLAVVIAAIGVFSNILLKGGLSWEALLVSFGYSTYFATRKILKINDLAGFCLE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M +L +++ + N L L+ GL++ + ++ +
Sbjct: 182 MSLLLPVCIYFAWQVDL---QAVQQANENILLLLVLLGLISGVALNTYIVASSLLPINVL 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G++ Y P++M+ S I + +D+ +F ++I+M++++ ++ +
Sbjct: 239 GLLGYAEPIMMLFVSFLI-GEQLDSETIPLFICLMISMILFMSEGLVRLKRR 289
>gi|261366466|ref|ZP_05979349.1| putative permease, integral membrane protein [Subdoligranulum
variabile DSM 15176]
gi|282571734|gb|EFB77269.1| putative permease, integral membrane protein [Subdoligranulum
variabile DSM 15176]
Length = 303
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/296 (9%), Positives = 89/296 (30%), Gaps = 12/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G WG++ Q+L E + ++ R+ + + +
Sbjct: 2 SDRVKGACLTMGGAACWGVSGCMGQYLFTRENMDSTWLVPIRLFLAGLLLCGFYFFKDRK 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGF--FIYALLTRQGFLTSFSYFVTPVISVFLG 135
+K + + + V + + + + ++PV+ + +
Sbjct: 62 TLFDPWNIKKNPRNAIDLVIYGVAGVSCCQFLYFLTIQLSTAGIATILQDLSPVLILLVL 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA-------VTWSAYCFARKTI 188
+ + ++ + +L ++ + ++T H L+++ A + +
Sbjct: 122 CLQQRRAPRLFELCSIVLALVGVFLLTTHGSFTSLAISPAALLAGIVCAGTVVIYTMWPK 181
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + + ++ + N F ++
Sbjct: 182 NLQAQYPTPMLQGWAFLMGGTLFHLVFRPWTMGYVPSAVGVFGIIVVVVVGNVLAFSLYM 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ + + P+ + S +L P + F + + +V+ LP
Sbjct: 242 SGVPLIGPQRASLYSFAEPVTAAIISTLVLGSPFTGWDALGFACIFVMLVLLSLPA 297
>gi|255100554|ref|ZP_05329531.1| hypothetical protein CdifQCD-6_07062 [Clostridium difficile
QCD-63q42]
Length = 314
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 15/307 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV 72
KE A L G + + I+WG + TQF ++ L++I+ R + +
Sbjct: 5 KKEGALLKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFF 64
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + L + + L+ +F VI
Sbjct: 65 -------KQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVP 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTI 188
F+G + + +L+ + II++L+ ++ + I++L + + I A+ +
Sbjct: 118 FIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSE 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L VV F+G + + F +
Sbjct: 178 FAKDNNPMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQT 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
KR + I+ T + + S+ ILK+ I I ++ + + T ++
Sbjct: 238 ICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLVIGSILIF--VAIITAETKLSF 295
Query: 309 GKNKTKK 315
K+K K
Sbjct: 296 LKSKKVK 302
>gi|115377648|ref|ZP_01464843.1| drug/metabolite transporter superfamily protein [Stigmatella
aurantiaca DW4/3-1]
gi|115365357|gb|EAU64397.1| drug/metabolite transporter superfamily protein [Stigmatella
aurantiaca DW4/3-1]
Length = 334
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/306 (11%), Positives = 87/306 (28%), Gaps = 15/306 (4%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCA-YILWGITPLYTQ--FLEQVSVLEVISHRVL 61
++ S L++ + P F A Y++WG T L + + L + R +
Sbjct: 2 SSPPSASALLTESVSQAPRREWLFFCLFALYVIWGSTYLGMRFALMGGFPPLMLGGSRFI 61
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
+ ++ + + +L + G A + +
Sbjct: 62 LAGAILYTLLRLKGFATPTRRQWAA------GAFTGLLLLVIGNGGVAIAQQWVPSGVAA 115
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------ 175
P+ + G + + L+ L + ++ + L A
Sbjct: 116 LVVGSMPLWAALFGGLADGQWPGTLERWGLALGFFGIAVLNRGGDLGTHWLPFAGLVLAP 175
Query: 176 VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
++W+ K P + +L + + F
Sbjct: 176 ISWAFGSIWSKRQPHMAPGLMATATQMLCAGVMLMGLSTLLGERMTALPTPRALLAFFYL 235
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
G + F + Y +K A+ + Y P++ ++ + + + ++
Sbjct: 236 VGFGSLVAFSAYGYLLKHARPALATSYAYVNPMVAVLLGWLLAGETPGPYTLVAMAAILG 295
Query: 296 AMVVYL 301
A+++
Sbjct: 296 AVMLIT 301
>gi|317057020|ref|YP_004105487.1| hypothetical protein Rumal_2373 [Ruminococcus albus 7]
gi|315449289|gb|ADU22853.1| protein of unknown function DUF6 transmembrane [Ruminococcus albus
7]
Length = 294
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 91/294 (30%), Gaps = 4/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ + + + L+ + ++ + R ++L + G
Sbjct: 3 KSKYKAVFYIVLSAFCFALMGLFVSASGDLPTMQKVFFRNFFAL--FIAIVSLKKSGTKF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
KN + + F TI V + + + + + ++ F+
Sbjct: 61 EIGDKKNHAVLFVRAFGGTIGMVGNFYALGKMNLSDALMLNKMSPFFVIVFSFIFLKEKL 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + A + L ++ + + ++ + A + G +
Sbjct: 121 TPFQALTVAGAFIGSLFIIKPSFSNVELFPAICGFLGGMGAGLAYTCVRYLGQHGVKGPV 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V A + F ++ + + + L G G+ + + A +
Sbjct: 181 IVAYFSAFSSLFALPFLIIQYKPMTLVQFLMLL-GAGISAAGGQFSITAAYSHAPAKEIS 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKT 313
+ +Y+ + + V L Q D + + I++ A++V++ ++ K
Sbjct: 240 VYDYSQLIFSTILGVIFLNQFPDKWSFVGYVIIIAMAVLVFVYNNFLHVENEKK 293
>gi|302533215|ref|ZP_07285557.1| integral membrane protein [Streptomyces sp. C]
gi|302442110|gb|EFL13926.1| integral membrane protein [Streptomyces sp. C]
Length = 333
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/309 (11%), Positives = 84/309 (27%), Gaps = 17/309 (5%)
Query: 7 KKEYSKGLSKENASLPTMMGTL----------FVFCAYILWGITPLYTQF-LEQVSVLEV 55
S+ + P GT F + + WG + L + E + +V
Sbjct: 15 APTTSRTTTHSPVRQPARRGTGGAARLDWRLRFALLSVV-WGFSFLLIKVGTEAFAPFQV 73
Query: 56 ISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTR 115
RV + + ++ L + T + +L+ +A +
Sbjct: 74 ALGRVFFGALALLVVLLVRREPLPRGRRTWGHLTVAALLLNTAPFSLFAYAEQSIPSSLA 133
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA 175
+ + + V L R I L ++ L +GI A+A
Sbjct: 134 GICNATSPLWGMALSLVALSEDRPTRRRFAGLGIGFLGVLTVLGAWQGFAGIDAKGTALA 193
Query: 176 VTWSAYCFARKTIPVGSSEGF-----FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
+ S + G + L + L + P
Sbjct: 194 LLASLSYPIGWIYVRRTLAGTPGSPVALTGAQLMVSTLQLAAVSALFTPAPAGFPLWPTL 253
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ L + + +T ++ Y P++ + V +L + + +
Sbjct: 254 AVVALGALGTGMALQMQYGLVSEIGPTTAQMVTYFIPVIATTAGVLVLGEQLHWNTPVGA 313
Query: 291 GIVVIAMVV 299
+++ +
Sbjct: 314 AVILAGAAL 322
>gi|256839254|ref|ZP_05544764.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|301311845|ref|ZP_07217767.1| integral membrane protein domain protein [Bacteroides sp. 20_3]
gi|256740173|gb|EEU53497.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|300829947|gb|EFK60595.1| integral membrane protein domain protein [Bacteroides sp. 20_3]
Length = 290
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 83/282 (29%), Gaps = 19/282 (6%)
Query: 30 VFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
I+WG T + T+ L +S +E++ +R + + +
Sbjct: 13 AILTVIIWGTTFVSTKILINTGLSPVEILLYRFVLAYFCILTIA-------HRRLWANCV 65
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + ++++ AL S P+I+ L +F KE L
Sbjct: 66 KDEFLLFLSGLCGGSLYFIAENTALGITLASNVSLLICTAPIITTVLSHLFYKESLRKGL 125
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ +L+ + + ++ + + L + + + L I
Sbjct: 126 LYGSLVALFGVGLVVFNGSVLLKVNPLGDFLTLVAATMWAFYCLILKRLSRSYPTLFITR 185
Query: 208 LFYVVWNGFSGGEHFFLG----------NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ I L + + + +++ ++ S
Sbjct: 186 KVFFYGILSLFFYFAIYPLNIKLELLKLPIVYLNILFLGVIASMLCYIMWNTAVRALGAS 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S L + I I ++ + +
Sbjct: 246 KTANYIYIVPLVTLITSAIFLSETITIASGIGALAIISGVYI 287
>gi|228993815|ref|ZP_04153720.1| Uncharacterized transporter [Bacillus pseudomycoides DSM 12442]
gi|228766026|gb|EEM14675.1| Uncharacterized transporter [Bacillus pseudomycoides DSM 12442]
Length = 305
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 82/290 (28%), Gaps = 13/290 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
LW + LE S + R+L + F + L LKD
Sbjct: 15 LTIFLWASAFPGIRVGLESYSPEHLALFRLLIGSALLVFIAIITRMRLPQLKDIPAILLL 74
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ V+ T + S TP+ S L FL+ER + I
Sbjct: 75 GFLG------FTVYHTALNIGEKTVSAGVASLLVSTTPIFSALLAVWFLRERFGLSRWIG 128
Query: 151 ALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+++ L + +++ + +L + +A + F + + F +
Sbjct: 129 SIISFLGVALISFATEGEVEITSGILFILLASCSESVYFVFQIRYLKKYGFFAFTTYTIW 188
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
F + + E + + +Y R S Y
Sbjct: 189 AGTFFMLFFLPGLTSEMMKSSIESTLSIVYLGLFPTVIPYLALAYVTSRVGASEATSSLY 248
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P L V + L + + I G+ + ++ L K K
Sbjct: 249 LTPALAFVIAWIWLGEVPTVLTVIGGGVTLFGVLFIQLKVDKFQQKAKQN 298
>gi|229089643|ref|ZP_04220905.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-42]
gi|228693673|gb|EEL47374.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock3-42]
Length = 308
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFEQRKFPAPMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 179 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGDVCIVLSVIFLTMPQ 296
>gi|224826088|ref|ZP_03699191.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
gi|224601725|gb|EEG07905.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
Length = 295
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/285 (9%), Positives = 89/285 (31%), Gaps = 6/285 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P+++G + V + + +G + + + + S ++ R + + + +
Sbjct: 3 PSLIGLIQVLLSAVAFGTMAILARFAYADGTSTTTLLLLRFVIAGLVLLPWVALQRLPWP 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +G + ++ + T L + V + + +
Sbjct: 63 TGRPL-LALIVMGAVGYAGMSACYFNALNHASAGTVALLLYLYPVLVLLLSMLLGERLTT 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ L ++ L + + L G+ L + C+ +
Sbjct: 122 LRLIALLLALSGLAVTIGLEFSARPLGLVLG---VGAALIYSCYILIGSRFTAGTHPLAA 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
CV+ + A G + + +F G+++ +
Sbjct: 179 TCVVILSAAASYALQSTWQGWGPPHSARGWLAIGMMALICTVAAVALFLNGLEKIGATRA 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ P++ ++ + +L +PI + + +++ A+++
Sbjct: 239 SLVSTVEPVVTLLLAWGLLGEPIGLSQALGGLLILGAVLLVSREA 283
>gi|149188203|ref|ZP_01866497.1| transporter, Drug/Metabolite Exporter family protein [Vibrio
shilonii AK1]
gi|148837792|gb|EDL54735.1| transporter, Drug/Metabolite Exporter family protein [Vibrio
shilonii AK1]
Length = 325
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/316 (16%), Positives = 113/316 (35%), Gaps = 20/316 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
+ T +G + +WG+T + ++ L V + ++ R + ++ G+ +
Sbjct: 1 MNTTNKDTFLGWVAAIAVACIWGVTGVVSKPLSMAVDPMTLVFFRYVTAVIGLSIIFFFT 60
Query: 75 SGGLSLL-----KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
S SL + + + V F +L + P
Sbjct: 61 SRSKSLSVDLGSSLKIDKKDIGRIALCGIVGQGVFSLFNFLSLAHIGATENGVIQGMQPF 120
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVT 177
+VF G +F+ R+N +Q A + + + M++ + + +A+
Sbjct: 121 ATVFFGMMFMNFRMNKIQWGAFIASAICIYAMSVGPTNTIEGGTPLLGYVYVTCSMLALA 180
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF--SGGEHFFLGNIPDTLFLIG 235
W+A+ A GS + +A+ +F V G S F + L +
Sbjct: 181 WTAHLRASLADKYGSVVSMLYQYISVAVMGIFVVFAMGLDLSQIYIIFSSPLLIALLIFL 240
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
++ + I Y KR + + PL+ + +V L + + +TI+ ++V+
Sbjct: 241 GTGISGGSYLIQLYSFKRIGVEKSTMALNLMPLVGYLVAVLTLGEQMAMGKTIIVSLIVV 300
Query: 296 AMVVYLLPTVINSGKN 311
A+ V+ K+
Sbjct: 301 ALYVFTKYETKEEPKS 316
>gi|56551832|ref|YP_162671.1| hypothetical protein ZMO0936 [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543406|gb|AAV89560.1| protein of unknown function DUF6 transmembrane [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 296
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/276 (13%), Positives = 84/276 (30%), Gaps = 12/276 (4%)
Query: 32 CAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A +W + + + + + + R W+L +S + L++
Sbjct: 14 LAAFMWASNFVIGRIIPPSMPPVSLSFWR--WTLAACILLPFVWSSLKKEWRVVLRHWPI 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L + A Y L + + TPV+ + E+ + +I+A
Sbjct: 72 ILLLGTTGQ--AGSNTLAYYGLHSTGATVALLIQSATPVVILLFAFFLYGEKPSPKRIVA 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT-------IPVGSSEGFFIEMCVL 203
L +L + G + I T + +
Sbjct: 130 MLFAFGGILFVIAAKGNGGAASTIGGTLLLTATMLCQALYATILRHKPPTTPLVLLFSCF 189
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+L + + G F + + + + F F F+ G+ S I
Sbjct: 190 VAASLVLLPFQIPYGVGLPFHDSHSLSAIIYLAIGPSIFAFLFFNRGVHIIGASRASIFL 249
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P+ + +V L + + + F +V + V+
Sbjct: 250 YLMPVFGSLIAVPFLGERLGWMHLTGFLLVGVGFVL 285
Score = 43.4 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 14/137 (10%), Positives = 46/137 (33%)
Query: 165 SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL 224
++L++A A F I S + + A + + S + + +
Sbjct: 5 WNNAWITLSLAAFMWASNFVIGRIIPPSMPPVSLSFWRWTLAACILLPFVWSSLKKEWRV 64
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
+ L+ + + YG+ + +++ P+++++ + F+ +
Sbjct: 65 VLRHWPIILLLGTTGQAGSNTLAYYGLHSTGATVALLIQSATPVVILLFAFFLYGEKPSP 124
Query: 285 VRTIVFGIVVIAMVVYL 301
R + ++ +
Sbjct: 125 KRIVAMLFAFGGILFVI 141
>gi|323303463|gb|EGA57257.1| YMR253C-like protein [Saccharomyces cerevisiae FostersB]
Length = 462
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/312 (13%), Positives = 99/312 (31%), Gaps = 37/312 (11%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS----------VLEVISHRVLWSLPGVFFAIVYF 74
+G + + +Y + T+ LE L+++ R++ + G +
Sbjct: 117 IGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYIN 176
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+S + P+ LV Y+L+ F+ P +++FL
Sbjct: 177 KSTISDVP--FGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFL 234
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------------------- 172
V L+ER ++ + +L+ +L ++++ S +
Sbjct: 235 SWVILRERFTKVEALGSLISLLGVVLIVRPSFLFGTPELTDSSSQIVESSDPKSRLIATL 294
Query: 173 ---AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ S + I + + L + ++ N + +
Sbjct: 295 VGLWGVLGMSCVYIIIRYIGKRAHAIMSVSYFSLITAIVSFIGINTIPSMKFQIPHSKKQ 354
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + + GI+R + +M YT L + V + K + I
Sbjct: 355 WILFGNLGVSGFIFQLLLTMGIQRERAGRGSLMTYTQLLYAVFWDVALYKHWPNIWSWIG 414
Query: 290 FGIVVIAMVVYL 301
I++ A + +
Sbjct: 415 MIIIISATLWVI 426
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 48/152 (31%)
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ L+++T+ + + V+ ++
Sbjct: 116 NIGLVLLTVSYFFNSAMVVSTKVLENDPDDIANDRQIKPLQILLVRMVITYIGTLIYMYI 175
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
S G +L+ G F Y + +S ++ + AP L I S
Sbjct: 176 NKSTISDVPFGKPEVRKWLVLRGCTGFFGVFGMYYSLMYLTISDAVLITFLAPSLTIFLS 235
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
IL++ V + I ++ +V+ + P+ +
Sbjct: 236 WVILRERFTKVEALGSLISLLGVVLIVRPSFL 267
>gi|294782806|ref|ZP_06748132.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
1_1_41FAA]
gi|294481447|gb|EFG29222.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
1_1_41FAA]
Length = 301
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 92/301 (30%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G L +F A +WG + ++++ R + ++ + +++
Sbjct: 1 MNKKSYFGDLMLFLAAFIWGTAFVAQVTGMDKIGPFTFNMARSIVAVICLGGYLIFTKAK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K L + + L T F +I F+ +
Sbjct: 61 IPENKSFLLKGGLIC-----GFFIFTGTSLQQIGLQYTTAGKTGFITSFYILILPFITMI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVG 191
FLK +++ L I+ ++ + L ++ + + + A
Sbjct: 116 FLKHKIDLLTWISIIIGFIGLYLLAIPNLSDFSMNKGDFIVFLGSFCWAGHILVIDYYSK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP--DTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + E L NI + + + +
Sbjct: 176 KVNPVELSFLQFVVLSILSGICALIFESETATLNNIFLSWKSVMYAGFFSSGVAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K K ++ + ++ IL + + + I IV +AM+ +P +
Sbjct: 236 GQKYTKPVVASLILSLEAVFAALAGYLILDEVMTSREFIGCFIVFLAMIFSQIPKDLFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|292655930|ref|YP_003535827.1| putative integral membrane protein [Haloferax volcanii DS2]
gi|291372241|gb|ADE04468.1| putative integral membrane protein (TBD) [Haloferax volcanii DS2]
Length = 306
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 83/287 (28%), Gaps = 6/287 (2%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A +L+G + + + + V + + RV + + + G
Sbjct: 7 LVLFVAAAVLFGTSFVGIKAAIGSVPPVLFAAFRVDVAAVVLLTLVAVRGGYWLPRTRAD 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +A + S +PV +V L ++
Sbjct: 67 ALGILASAAFVLGANNVFLFLGQQHATTGAAAVMYSIMPVASPVFAVLLLDDARISAVDA 126
Query: 146 LQIIAALLIILSLLI--MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I+ L+ ++ ++ L G +L + S VG S G +
Sbjct: 127 AGILLGLVGVVVIVGPESVLGGGSVGQALIVCSALSVAFGTVLLKRVGPSIGTLPQTAWA 186
Query: 204 AIPALFYVVWNGFSGGE---HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
A + GE L + + ++ + A
Sbjct: 187 MAAAAVGIHAASLGLGESVAQVAWSPELVAAILYVGMPATAAAYPVYFALLSEAGPVRGN 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ Y P++ V+ L + + + FG+++ ++ +V
Sbjct: 247 LVAYAMPVVATVTGWAFLGEAVSPATVLGFGVILSGFLLVQRESVAR 293
>gi|262382278|ref|ZP_06075415.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295156|gb|EEY83087.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 290
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 83/282 (29%), Gaps = 19/282 (6%)
Query: 30 VFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
I+WG T + T+ L +S +E++ +R + + +
Sbjct: 13 AILTVIIWGTTFVSTKILINTGLSPVEILLYRFVLAYFCILTIA-------HRRLWANCV 65
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + ++++ AL S P+I+ L +F KE L
Sbjct: 66 KDEFLLFLSGLCGGSLYFIAENTALGITLASNVSLLICTAPIITTILSHLFYKESLRKGL 125
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ +L+ + + ++ + + L + + + L I
Sbjct: 126 LYGSLVALFGVGLVVFNGSVLLKVNPLGDFLTLVAATMWAFYCLILKRLSRSYPTLFITR 185
Query: 208 LFYVVWNGFSGGEHFFLG----------NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L + + + +++ ++ S
Sbjct: 186 KVFFYGILSLFFYFAIYPLNIKLELLKLPVVYLNILFLGVIASMLCYIMWNTAVRALGAS 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S L + I I ++ + +
Sbjct: 246 KTANYIYIVPLVTLITSAIFLSETITIASGIGALAIISGVYI 287
>gi|239995116|ref|ZP_04715640.1| permease of the drug/metabolite transporter [Alteromonas macleodii
ATCC 27126]
Length = 314
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 106/315 (33%), Gaps = 18/315 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ K + + G L + A LWG T QF ++S L + + + + +
Sbjct: 1 MEKAVNTSDVVKGVLAIVIASFLWGTTGTAAQFAPEISPLAIGAFAMGIGGVLLCVSARK 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + G + LA + + + + P+ +
Sbjct: 61 SLVKDAPILFSTPLTFLFGSACVAIYPLAFYSSMRLSGVAIGTVVSIA----SAPLFAAL 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------------IAVTWS 179
L K+ ++ I+ + + ++ + ++L+ IA
Sbjct: 117 LEYFLSKKPVSLKWFISFVFGAFGIGMLAMGKAHDAMALSASKDDQVFGVMLGLIAGLTY 176
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
A + + M L A ++ + + G++ F I ++ L +
Sbjct: 177 AGYSWAAKQHIDAGANSKSAMAGLFGCAAVALLPSLWFTGQNLFANTIHISVSLYMAVVP 236
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +F YG++ + S ++ PL+ + ++F++ + V + +V + +++
Sbjct: 237 MFLGYLLFGYGLRTTEASKATLITLIEPLVATLFAIFLIGEVFKPVGWVGMTLVCLCLLI 296
Query: 300 YLLPTVINSGKNKTK 314
+ + K
Sbjct: 297 QSIKFPFALKRYGKK 311
>gi|153801197|ref|ZP_01955783.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153825715|ref|ZP_01978382.1| permease of the drug/metabolite transporter [Vibrio cholerae MZO-2]
gi|124123215|gb|EAY41958.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|149740554|gb|EDM54665.1| permease of the drug/metabolite transporter [Vibrio cholerae MZO-2]
Length = 297
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 86/281 (30%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F L + +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQHWPHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L ++ +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLWHGTPLSRKAVAGLLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ ++ + L + A+ ++Y A F A +V
Sbjct: 133 AVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQVSAFENAHGSMWAACLWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ ++ + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMWFVPLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+IL +PI +V+ ++ ++ N+ ++
Sbjct: 253 WGYWILDEPIGFNTLFGTLLVLAGTMLVTGFSLRNARLSRQ 293
>gi|167648574|ref|YP_001686237.1| transporter DMT superfamily protein [Caulobacter sp. K31]
gi|167351004|gb|ABZ73739.1| RarD protein, DMT superfamily transporter [Caulobacter sp. K31]
Length = 305
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 6/286 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ Y LWG PLY L V E+I+HR +WS+ ++ G +
Sbjct: 18 YIAGVACYGLWGFLPLYFHLLHQLGVGSWEMIAHRTMWSVLWAGGLVLLAKQG-GQVAAV 76
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L+ PK + ML+ S + +W +++A+ S Y++ P++++ G++ +ER++
Sbjct: 77 LRQPKTLVMLLLSTLAIFSNWTIYVFAVNAGHVIEASLGYYINPLMNMAAGALLFRERMS 136
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+A L + + I T+ G P++SL +A+T+ Y RK + + G FIE L
Sbjct: 137 LEGKVAIGLAAVGVAIQTMALGHLPVVSLGLALTFCVYAILRKQVKADAQTGLFIECAYL 196
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+P L YV W+ + G F P +L L+ G +F++ +R LS VG ++
Sbjct: 197 ALPGLAYV-WHLQASGAGHFASAAPVSLLLMLAGPATVAPLALFAWSARRLPLSAVGFLQ 255
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ AP + + V L + +R + F + + + V+ +
Sbjct: 256 FIAPTIQFLLGVA-LGEAFTPMRALSFVFIWLGVAVFAYGAWKRTR 300
>gi|163938505|ref|YP_001643389.1| hypothetical protein BcerKBAB4_0495 [Bacillus weihenstephanensis
KBAB4]
gi|163860702|gb|ABY41761.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 310
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 102/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNKSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGVFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWRHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARK 186
+ K+ +QI+A + + + + I + L+ A+ ++ Y
Sbjct: 121 AFEQKKFPASMQILAIITALTGTYFIITNGSIENIVLSKAAITFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTTIVIGWGMLIGGIALLICNRSFGWSQISQTFTLQTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|229010006|ref|ZP_04167221.1| Transporter, drug/metabolite exporter [Bacillus mycoides DSM 2048]
gi|228751288|gb|EEM01099.1| Transporter, drug/metabolite exporter [Bacillus mycoides DSM 2048]
Length = 310
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 102/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNKSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGVFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARK 186
+ K+ +QI+A + + + + I + L+ A+ ++ Y
Sbjct: 121 AFEQKKFPASMQILAIITALTGTYFIITNGSIENIVLSKAAITFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTTIVIGWGMLIGGIALLICNRSFGWSQISQTFTLQTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|258404240|ref|YP_003196982.1| hypothetical protein Dret_0102 [Desulfohalobium retbaense DSM 5692]
gi|257796467|gb|ACV67404.1| protein of unknown function DUF6 transmembrane [Desulfohalobium
retbaense DSM 5692]
Length = 289
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 12/284 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G L + A LWG+ ++ + +EV R +
Sbjct: 1 MSGILAILTAAALWGLIGPLAKYAFAHGFTPMEVAFWRAALAWGFFATHAGLRGQLR--- 57
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ +VF ++V +G + A+ + + + P L + E
Sbjct: 58 ---IQWRDLGPTIVFGFFSVSVFFGAYQVAVARSGAAVAAVLLYTAPSWVALLSRLLFSE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L +++ + L L + + + L + + +A G
Sbjct: 115 ALTPIKLASIALSTLGVAAVAFGRADLGPVNLDWIGVTAGLTAGLTYAIYYIFGKHYLGS 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L AL + + + + + I+ +G+KR + +
Sbjct: 175 YPSGTLFFYALPVGAFFLWPLADFGYHPFPAWLAVGAIAFFSTYLAYAIYCHGLKRLQPA 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ P++ + +V + + I +V +V
Sbjct: 235 RAAVLATFEPVVAAILAVIWWGERFTLLGIIGGLCIVGGVVWMS 278
>gi|222086472|ref|YP_002545006.1| transporter [Agrobacterium radiobacter K84]
gi|221723920|gb|ACM27076.1| transporter [Agrobacterium radiobacter K84]
Length = 319
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 16/301 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G L +F + IL I ++ + + EV + R ++ +
Sbjct: 13 QSELTFGLLMMFLSVILSPIIDIFAKLAATTIPPAEVTAARFIFQSLFALPMMALRGQW- 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + G+ A +L + F+ L + +FV P++ L S+F
Sbjct: 72 -----GLWSLRRSGVHAIRAAVLTLSMVSFVTTLQVMEVADAIAIFFVEPIMLTILSSIF 126
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE + + A + +++ S + +A+ +A C A +
Sbjct: 127 LKETIGWRRYTACAVGFFGAMLIIQPSFAEVGFVALLPVVTALCIAVYVMITRVVSHSED 186
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS---------FVFCIFSY 249
+ ++ + G+ + + + Y
Sbjct: 187 AWPMQFQTGIWGTIICLILLTIGQGTGSSIIDPVVPDGTAMLHLLGVGVSAAIAGVLTIY 246
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ A ST+ ++Y + + + D ++ + I++ + + L +
Sbjct: 247 AYRSAPASTLAPLQYFEIVSATIFGWLVFGNFPDLIKWVGIFIIIGSGLYILWRERRFAS 306
Query: 310 K 310
K
Sbjct: 307 K 307
>gi|52425809|ref|YP_088946.1| RhaT protein [Mannheimia succiniciproducens MBEL55E]
gi|52307861|gb|AAU38361.1| RhaT protein [Mannheimia succiniciproducens MBEL55E]
Length = 293
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/289 (8%), Positives = 82/289 (28%), Gaps = 16/289 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
++ A ++W + +F + + R++ S V +
Sbjct: 1 MFYLIAAVLIWASAFIAAKFSYTMFDPALTVMLRLILSALLVLPTFFRSYRKIP------ 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + V + P++ LG +F +
Sbjct: 55 -KQYRLQLWGLGLLNFPVVLLLQFTGVHYTSVASAVTMLGTEPLVVTLLGHIFFHKPARL 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM----- 200
L + ++ + ++ + S + T + + ++ +
Sbjct: 114 LDWLLGIVALTGIVFVVYGSESGGEVTLLGCTLVLLGSIAFSFSIHLAQSVMKAVEAKAY 173
Query: 201 ---CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L + L + ++S G++ + +
Sbjct: 174 TDVIIMTGAISCVPFSLLLVQDWQIHLNIEGISAILYLSVGCTWLAYRLWSKGLRVSSAN 233
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
T I+ P+ ++ ++ +L + + +V+ A + +L +++
Sbjct: 234 TASILTTLEPVFGVLLAILLLGEHLTLTTLFGICLVISAAGISVLSSML 282
>gi|260425639|ref|ZP_05779619.1| permeases of the drug/metabolite transporter [Citreicella sp. SE45]
gi|260423579|gb|EEX16829.1| permeases of the drug/metabolite transporter [Citreicella sp. SE45]
Length = 326
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 89/301 (29%), Gaps = 9/301 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY 73
S + + M G + ++ +G T + L ++ L+V+ R + GV +
Sbjct: 14 SAASRAPDNMKGIALITLGFVFFGATDAMAKLLTTELPALQVVWMRQIGLFMGVLVMLGM 73
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + + + SA + + + F+ P I
Sbjct: 74 RGLHLMRTRHPVIQIGRGVLATCSAAFFILT-------IQHVPLADATAVTFIAPFIVTA 126
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +FLKE + + A + +LI+ +A FA + +
Sbjct: 127 IAGLFLKEPVGWRRWAAVAVGFAGMLIVIRPGMGVFHPAIFMAVAAATAFASRQLLSRML 186
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD-TLFLIGYGLLNSFVFCIFSYGIK 252
G +A ++ + + + L +
Sbjct: 187 SGDDTIATTVAYTSITSTLILTLPIAFVWETPGVSWIWFVAPLMALCAGVGEIFMIRALD 246
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A+ V M+Y+ L + + D + ++V + + L I + K K
Sbjct: 247 VAQAVVVAPMQYSMILWSTLYGFILFADLPDLWTLLGCAVIVASGLYTLNRERIVARKVK 306
Query: 313 T 313
Sbjct: 307 Q 307
>gi|223039122|ref|ZP_03609412.1| integral membrane protein DUF6 [Campylobacter rectus RM3267]
gi|222879483|gb|EEF14574.1| integral membrane protein DUF6 [Campylobacter rectus RM3267]
Length = 297
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 92/295 (31%), Gaps = 14/295 (4%)
Query: 28 LFVFCAYILWGITPL-YTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F ++WG+T L Q L+ SV ++ R L S + + F+ +
Sbjct: 11 FALFVIAVVWGVTFLPMAQTLKTNSVFTLLFWRFLISAVLMALISLKFTRKI-------- 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++ F +L + +AL +F + V + F+ F +++
Sbjct: 63 DRNSLRFGAFLGALLFAAFTLQTFALKYALSSTVAFITGLNAVFTPFIALAFFGQKVVVY 122
Query: 147 QIIAALLIILSLLIMT-----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I A L L ++T G L + F +
Sbjct: 123 AFIGAFLSAAGLYLLTGSELGFGVGEGLSVVCALGFALHIIFTGVLVRRCELYWMVSAQF 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
F G L + F + + + +
Sbjct: 183 AAVAALCFVAAQIFEPRGVVPVLDEAFFIAVAVTSVFATVLAFFVQTAAQRYTTPVKTSL 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ P+ + F+ + + V+ G+++ +VV + + + K++ +++
Sbjct: 243 IFTFEPVSAGIVGYFVGGEILSGVQIAGAGLILFGIVVSEVGSYYKNKKSRNERN 297
>gi|212715198|ref|ZP_03323326.1| hypothetical protein BIFCAT_00087 [Bifidobacterium catenulatum DSM
16992]
gi|212661879|gb|EEB22454.1| hypothetical protein BIFCAT_00087 [Bifidobacterium catenulatum DSM
16992]
Length = 327
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/294 (10%), Positives = 84/294 (28%), Gaps = 11/294 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVY 73
E ++GT +WG+ + L Q+ + + R L++ +F
Sbjct: 34 EQTPKSLLIGTGMTLLGGAMWGMNSTVAKLLMRDYQLDPVWLSCVRALFASL-IFLVGSA 92
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ L LV + + + ++ + + + V +
Sbjct: 93 ITTPQKLAGAVKDVKSYPKYLVTTLICVLLVQVSYLMTIDWTNSGTATVLQTLNLVFVLT 152
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARK 186
+ +K +++ LL ++ L+ + S +
Sbjct: 153 WVCLRVKRLPLKHELVGVLLAFAGTFLIATGGNFASLSLPWQGLAWGLVDAVSTAAMSIL 212
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + G + + + + L L L F +
Sbjct: 213 PVMLMLKWGDMTINGITFLMSGLILCPFAQPWANIPALDARGVLLLLYTIVCGTFLAFWL 272
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ G+ R ++ + P++ +++V + F +++I + +
Sbjct: 273 YMAGVMRVGAVRATMLGTSEPVMATITAVAWAGETFTFTDLTGFAMIIIMVFLV 326
>gi|253700545|ref|YP_003021734.1| hypothetical protein GM21_1923 [Geobacter sp. M21]
gi|251775395|gb|ACT17976.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M21]
Length = 298
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 95/290 (32%), Gaps = 12/290 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P G + + + + + F ++ V++ R L + +F + L+
Sbjct: 3 PKHRGAWLIAASAAGFATLGILIKSAFSGGANITTVLAGRFLVASFFLFIYLKVRKTPLA 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + +GM+ + + + LT + P + + V
Sbjct: 63 IGRRSSLHLLLMGMIGYGGMSMLYANA-----INYLPASLTGMLLYTYPALVTVIALVLR 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKTIPVGSSE 194
+E N + +A ++ L+++ S + A + + + +
Sbjct: 118 EESFNAAKGVALVVCSAGLVLLLGASFEGARLEGVLSVLGAAGIYSCYIIIGNRILKNID 177
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ V A ++++ +GG L L G+++
Sbjct: 178 PLVTSLWVCASAGFTFLLYGVATGGLTLDLAPAGWLSILGIALFPTLIAVVAMFAGLRQV 237
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ PL+ ++ S +L + I ++ +++ ++ L
Sbjct: 238 GATNASIISMLEPLITVLLSALLLGERITALQGFGGAVLLFGGLILQLWG 287
>gi|229917224|ref|YP_002885870.1| hypothetical protein EAT1b_1499 [Exiguobacterium sp. AT1b]
gi|229468653|gb|ACQ70425.1| protein of unknown function DUF6 transmembrane [Exiguobacterium sp.
AT1b]
Length = 299
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 84/296 (28%), Gaps = 14/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L + A +WG + +++ L + + R + +F F
Sbjct: 2 RKEWLGALSLTLAASIWGGMYVVSKYALAYIEPFTFVWLRYAVAFMVLFVVWFRFGR--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++++ + + F S TP V + L
Sbjct: 59 ---ESIRRADWKWIGLVGVIGYVASISFQFIGTKLSDAHTGSLVTAATPAFMVLFARILL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS------ 193
KERL ++I A L + +LI+ G + + A
Sbjct: 116 KERLTPVKIGALGLATVGVLIVVGWEGEGTYRVGSIILVLAAVTWALMSIYVKIGTQTLS 175
Query: 194 -EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+A + ++ L + L + + F ++ G++
Sbjct: 176 TLTLTTFAIGVAWLLMTPLMSIEVMQNGFPELNGVLWLSVLYIGVVSTAGAFFFWNKGLE 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S + + PL+ +L + + I G ++ A+ L
Sbjct: 236 LMDASVGSLFFFFQPLVGGTLGWLVLNETLHLNFFIGAGCIMTAVTWSTLAERRQQ 291
>gi|78044974|ref|YP_360687.1| hypothetical protein CHY_1867 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77997089|gb|ABB15988.1| putative membrane protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 303
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 88/289 (30%), Gaps = 11/289 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L++ +L+ + + L V+ ++ R + + + + L
Sbjct: 5 YLYLGITVVLFSTYEVVGRALAGLVNPFQLNFLRFFFGGFVLLPVAL---SNIKRKNVKL 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + F + + L + + P+ V + L E+LN
Sbjct: 62 TGSDFLFAFLIGLLNVVLSMSFLQIGINMTKASLAAAIFSSNPLFVVLFAYLILDEKLNF 121
Query: 146 LQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+I+ + I+ ++I+ + +L L +A ++ +
Sbjct: 122 QKILGLFIGIVGVVIVFYKDLELGISHVYGILMLILAAVTYGLYTVLGKRFSQKTDSVIM 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++F + F L + + + G+
Sbjct: 182 NSFSFILGSVFLLPIILLKHYPLFSLQPKAILPMAYLTFFVTGLAYYTYFLGLTNISAGN 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + P+L + IL + I ++++ + + +N
Sbjct: 242 GSMVFFIKPVLASFFAWAILGEKITFEFIAGTMVILLGIYIVQWAGQVN 290
>gi|13476837|ref|NP_108406.1| hypothetical protein mlr8275 [Mesorhizobium loti MAFF303099]
gi|14027598|dbj|BAB53867.1| mlr8275 [Mesorhizobium loti MAFF303099]
Length = 297
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/278 (10%), Positives = 70/278 (25%), Gaps = 1/278 (0%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ V + W + L LE+ + R + + L L + +
Sbjct: 20 IAVALTVVGWASAFPAIRAGLAAFGPLELGALRFAIAAVPAAIFLAVKRPALPRLDEVWR 79
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V T + + A S + +++
Sbjct: 80 LVFGGAIFVALYTAMLNFGELTVSAGAAGFIINVSPIFTAIMAMALLGERFSRWAWAGTA 139
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
A + +I LH L + + SA + I + +
Sbjct: 140 ISFAGIGVIAMADGQGLHFNAGALLVLGSALCSAVNTIVQKPLFARHHPLTISASNMVLG 199
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
AL + + + + + + ++ + R + Y
Sbjct: 200 ALCLSPFLPSGFAQAAVANTAGLGAVIFLGIVPSLIAYAAWATALSRLPAARASNFLYLV 259
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + F L + + + + + ++V L
Sbjct: 260 SPMSALIGFFWLGEVPTLLGILGGALALGGVIVVNLKR 297
>gi|150018238|ref|YP_001310492.1| hypothetical protein Cbei_3410 [Clostridium beijerinckii NCIMB
8052]
gi|149904703|gb|ABR35536.1| protein of unknown function DUF6, transmembrane [Clostridium
beijerinckii NCIMB 8052]
Length = 297
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 89/282 (31%), Gaps = 11/282 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P + G + V +LWGI+ Q+L + S ++ R+L S + + G
Sbjct: 4 QPRIKGIILVIIGAMLWGISGTAAQYLFQKKGFSPEWLVVIRLLSSGIILLLYT-FMKGE 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + A+ ++ FS + + A+ + + +PVI ++
Sbjct: 63 QNIWEVWKSKNDALSLIFFSVLGMLGVQYTYFAAIKYGNAATATILQYSSPVIITCYLAI 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPV 190
K+ +IIA L +L + I + IA ++A + + +
Sbjct: 123 RNKKIPKLKEIIAIGLAMLGTSFIITKGNIHSISISRLALFWGIASAFAAAFYTLQPRLL 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + + + + + F F
Sbjct: 183 LRKWGSILVVGWGMLIGGISFSFIEQPWNCTGIWSTNSILAIIFVVLFGTLIAFTCFLES 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ K + I+ PL + SV L + + + I
Sbjct: 243 LNYIKPTESSILSSAEPLSAAILSVLWLHEELGIAQWIGTAC 284
>gi|302336268|ref|YP_003801475.1| protein of unknown function DUF6 transmembrane [Olsenella uli DSM
7084]
gi|301320108|gb|ADK68595.1| protein of unknown function DUF6 transmembrane [Olsenella uli DSM
7084]
Length = 339
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 94/292 (32%), Gaps = 11/292 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + G +F LWGI ++ L V L + S R L + +F
Sbjct: 47 SHGKTLLRGIVFTLLGGTLWGINGTVSKVLMDAYGVDPLWLASAREL-TACWLFLIAARV 105
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ L + G+L + + + ++ A+ + + V+ +
Sbjct: 106 TSPGRLHGLLHDHHALWGVLGIALGSILLSQVAYLEAIDWTNSATATVLQSLEVVLVMAY 165
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AYCFARKT 187
V + R +++ +L ++ ++ L L + A A +
Sbjct: 166 VCVVNRRRPRRRELVGLVLAVVGTYLVATGGNPGELRLPPMGLFWGLACAAAATILAIQP 225
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + G F + + A + L L + L + ++
Sbjct: 226 VRMIGRWGNFAVNGLAFLFAGVALSALCHPWEHMPALDAFGVALVMASVVLGTFGAYALY 285
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+K ++ T P++ VSSV L + F ++V+ + +
Sbjct: 286 LQGVKEVGSVRGSMLATTEPVMATVSSVVWLGTSFSPADLLGFVMIVVMVFL 337
>gi|317486594|ref|ZP_07945414.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
gi|316922146|gb|EFV43412.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
Length = 293
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 92/291 (31%), Gaps = 15/291 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +Y WG + ++ E + ++V+ RV ++
Sbjct: 9 MALLILSYATWGGGMIAMKYAFESFTAMQVVFARVAFAGVIYLAL------YRLWSHIPY 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L + + +A+ P+ + +FL E+L
Sbjct: 63 QKGDWKYLLAMVLFEPCLFFLCETFAMTYTTASQGGVIAACFPLCTAVAAWLFLGEKLTK 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARKTIPVGSSEGFF 197
IIA LL + + +L + + + SA +A + F
Sbjct: 123 KTIIAMLLAVAGVAGASLAAESSDQASNPILGNLLMVGAVLSATGYAVCVRFISRRYSFL 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ A+ + F+ + L + V+ F++ +K +
Sbjct: 183 SISAIQALGGTIVFLPFVFTTPMPVNVTMPAIGGLLYMGLGVGFLVYLSFNFALKHLEAG 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V + P+ ++ + IL + + +T+ G+ + +++ LP
Sbjct: 243 IVALFGNLIPVFTLIFAFTILGERLTLAQTLGVGLTFVGVIIAALPEKQRQ 293
>gi|303233141|ref|ZP_07319814.1| putative membrane protein [Atopobium vaginae PB189-T1-4]
gi|302480726|gb|EFL43813.1| putative membrane protein [Atopobium vaginae PB189-T1-4]
Length = 318
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 86/294 (29%), Gaps = 11/294 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIV 72
+ + + + G + LWG ++ + +S L + R +++ +F
Sbjct: 24 QNSHNRRLLHGIMLTLAGGSLWGANATLSKIIMDTYAISPLWLACIREIFAAL-LFLLCA 82
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
Y + + + + + + + ++ A+ + + + +
Sbjct: 83 YKQTPDKVRAVFEHPSSLISIALVAYDAILLSQVSYLQAINWTNSATATILQNICVIFVM 142
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFAR 185
V + +I +L I+ + ++ +A A
Sbjct: 143 VYVCVVNRRAPKRREIAGLILAIVGTFFICTGGDPSKFLLPPEGLMWGLSCALAAAILAI 202
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + G F+ + A + L + L +
Sbjct: 203 HPLALIEAYGNFVVNGFAFLVAGTTLACVVQPWNHLPALDVQGVIYLIATVVLGTFGAYA 262
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+F G+K ++ + PL +++ + F +++I + +
Sbjct: 263 LFLEGVKEVGSVKGSMLGTSEPLAATITAAVVGGAVFSPGELFGFALIIIMVFL 316
>gi|311744688|ref|ZP_07718485.1| protein of hypothetical function DUF6 [Aeromicrobium marinum DSM
15272]
gi|311311997|gb|EFQ81917.1| protein of hypothetical function DUF6 [Aeromicrobium marinum DSM
15272]
Length = 306
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 92/291 (31%), Gaps = 7/291 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++G L V + + +G ++ + ++ V +S+ A+V L
Sbjct: 7 RRLLGALLVAVSAVAFGSMAIFGVWAQRDGADTPALILVRFSVAAAVLAVVLAVVRGRLG 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + F AL Q L + ++ P L +VFL+E
Sbjct: 67 LVRPPWHRIWPVAALGGIGYIGQAYCFFLALEYAQASLVALLLYLFPAFVAVLAAVFLRE 126
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS-------E 194
R+ + +A L + ++ L +A+ V + TI +
Sbjct: 127 RIGLVTALALGLALCGTFLVVGGGSGRPLGIALGVGAAVIYSLYITIGSVVTRDLDALTV 186
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + +V F + + F G+
Sbjct: 187 STVVCAAASCVGGGIVLVLVAAGRSPSFPATAAGWGSLVAIALIGTVVAILTFFAGLALL 246
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ ++ P++ + + ++L + + V+ + +V+ A+V L
Sbjct: 247 GPTSASVLSTLEPVVTVGLATWLLDESLTGVQAVGAALVLGAVVWLALEGR 297
>gi|291008554|ref|ZP_06566527.1| transmembrane drug/metabolite transporter family protein
[Saccharopolyspora erythraea NRRL 2338]
Length = 309
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 76/280 (27%), Gaps = 11/280 (3%)
Query: 31 FCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+WG + + + V + V R L+ ++ + + +
Sbjct: 16 VLLSAIWGSSFVLIKVAVDAGVEPVWVALWRCLFGALALWAVWLASGAARPSIPRDPRTW 75
Query: 89 KAVGMLV--FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ +A + + G + + T + +FL
Sbjct: 76 GHAAVVAALHNAAPFTLFAYGETHISSVLAGVWNATTPLATLLFVLFLLPSEHPTPRRLA 135
Query: 147 QIIAALLI-------ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++A + L + L+ R S I
Sbjct: 136 GLLAGFAGVLVVLGVWRGVEGGVLAGSLACLAATTCYGAGFTYTRRFFSGRSDSASALII 195
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +V GG + G +P ++ + F + I+ A +
Sbjct: 196 LQLTFATLELLLVAPLLGGGAPGWPGLLPAACLVLLGAVGTGMAFLLNMRVIRAAGSTIA 255
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y PL V +L +P+ +V+ ++
Sbjct: 256 STVTYVTPLWSTVLGALLLSEPLGWNTVAGGALVIAGVLF 295
>gi|320009424|gb|ADW04274.1| protein of unknown function DUF6 transmembrane [Streptomyces
flavogriseus ATCC 33331]
Length = 307
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 89/292 (30%), Gaps = 19/292 (6%)
Query: 28 LFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
A ++WG T L T + L L + R L + + + +
Sbjct: 11 ALTVLAPLVWGSTYLVTTELLPPDRPLLAATLRALPAGLILLAI----------GRTLPR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V + A G + + V P I + L ++ LKER+
Sbjct: 61 GGWWWRAAVLGTLNIGAFLYLLFVAAYHLPGGVAALVMAVQPTIVLVLSALLLKERITRS 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-------FFIE 199
A L I+ + ++ L G L ++ + + + G
Sbjct: 121 HAAACALGIVGVGLLALTPGAGLDAVGVGAGLLGAVSMATGVVLTKRWGRPSGVGLLTFT 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L L + G + F + + ++ G++R TV
Sbjct: 181 GWQLTAGGLLLLPVTLLGEGLPGSVDGRNVAGFAYLGLVGALLAYAVWFRGVERLPALTV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ + +PL + L + + V+ VV+A+ + LP +
Sbjct: 241 SVLGFASPLAAMALGYVFLGETLSPVQLAGALTVVVAVAL-ALPRARKGRER 291
>gi|221636065|ref|YP_002523941.1| protein of unknown function DUF6, transmembrane [Thermomicrobium
roseum DSM 5159]
gi|221157437|gb|ACM06555.1| protein of unknown function DUF6, transmembrane [Thermomicrobium
roseum DSM 5159]
Length = 310
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 89/286 (31%), Gaps = 15/286 (5%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
F A ++WG + + ++ L R++ ++ + + + L + +
Sbjct: 14 AFLAVLIWGASFPIVKHGVDSFGPLGFAVVRLIVAIACLLLWLRWRGEALRIERADWPR- 72
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ V + + F+ + ++ +P+ ++ + + ++R I
Sbjct: 73 ----LAVAGFGAMGLFQILFLVGMHHTTATHSALFLNTSPLWALPISWLVERQRPRLGAI 128
Query: 149 IAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
I A+L ++ M G L A R + +
Sbjct: 129 IGAVLGFAGVVAMIGRPEGEARSTLWGDLLTLGAALCWVGVTLIPRPLVRRYGAVPITTW 188
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M + ++ + V + H G L L + ++R +T
Sbjct: 189 MLIASLVVVSLVGFPETMQSLHEVPGWGAWGALLYTGILAMVGANVFWQRAVQRLGAATT 248
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y P + +V + + I + I V + +++ +
Sbjct: 249 LVYYYLQPGIALVLGAMFVGERIRVTQVIGIMAVFVGVLLAQRAGL 294
>gi|134097976|ref|YP_001103637.1| transmembrane drug/metabolite transporter family protein
[Saccharopolyspora erythraea NRRL 2338]
gi|133910599|emb|CAM00712.1| transmembrane drug/metabolite transporter family protein
[Saccharopolyspora erythraea NRRL 2338]
Length = 308
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 76/280 (27%), Gaps = 11/280 (3%)
Query: 31 FCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+WG + + + V + V R L+ ++ + + +
Sbjct: 15 VLLSAIWGSSFVLIKVAVDAGVEPVWVALWRCLFGALALWAVWLASGAARPSIPRDPRTW 74
Query: 89 KAVGMLV--FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ +A + + G + + T + +FL
Sbjct: 75 GHAAVVAALHNAAPFTLFAYGETHISSVLAGVWNATTPLATLLFVLFLLPSEHPTPRRLA 134
Query: 147 QIIAALLI-------ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++A + L + L+ R S I
Sbjct: 135 GLLAGFAGVLVVLGVWRGVEGGVLAGSLACLAATTCYGAGFTYTRRFFSGRSDSASALII 194
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +V GG + G +P ++ + F + I+ A +
Sbjct: 195 LQLTFATLELLLVAPLLGGGAPGWPGLLPAACLVLLGAVGTGMAFLLNMRVIRAAGSTIA 254
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y PL V +L +P+ +V+ ++
Sbjct: 255 STVTYVTPLWSTVLGALLLSEPLGWNTVAGGALVIAGVLF 294
>gi|157371401|ref|YP_001479390.1| transporter DMT superfamily protein [Serratia proteamaculans 568]
gi|157323165|gb|ABV42262.1| RarD protein, DMT superfamily transporter [Serratia proteamaculans
568]
Length = 294
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 119/295 (40%), Gaps = 7/295 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSL 80
+ G A IL+G+ YT L + +V R L ++P + +++ +
Sbjct: 2 IKGIALSVIASILFGVMYYYTSTLTPLDGEQVFGWRTLLTVPFLTLFMLFSADWRKVNET 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + P+ + L S+ +L V F++A L + S YF+ P+ V G + +
Sbjct: 62 LCWIKQRPRRLLFLPLSSALLGVQLWLFLWAPLHGKALEVSLGYFLLPLTMVLAGRLIFR 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+RL+ LQ +A I+ + G+ +L +A+ + Y R+ + G + E
Sbjct: 122 DRLSLLQKLAVTCAIIGVGNELYQVGGVSWTTLVVALGYPVYFILRRRFGTDNLGGLWCE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ A ++ + + G++++ + + S
Sbjct: 182 LTLMLPVAAWFAFGGNGPLAALSISPALYWQ--VPLLGIISAAALVCYILASRLLPFSLF 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G++ Y P+L+++ +L + I + + + +A+++ + + + +
Sbjct: 240 GLLSYVEPVLLVIV-ALLLGESIGRDEWLTYIPIWLAVLLLVSEGARHLVRRRRA 293
>gi|90020671|ref|YP_526498.1| 30S ribosomal protein S6 [Saccharophagus degradans 2-40]
gi|89950271|gb|ABD80286.1| protein of unknown function DUF6, transmembrane [Saccharophagus
degradans 2-40]
Length = 293
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/299 (16%), Positives = 101/299 (33%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P G L ++ L +T L+ + + + + R ++ +F + L L
Sbjct: 2 NPQKTGLLSLYFGIFLMSLTGLFAKSI-PLDATSITQLRSTVAIVALFIYCMLRGSSLRL 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ K + +A+HW + +A+ + S F PVI+V L +F K
Sbjct: 61 -----KSFKEAAGIYGLGIFMAIHWVTYFHAMQVSTVAIGMLSLFSYPVITVLLEPLFQK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ +IA L ++I+T+ L A+ A + +
Sbjct: 116 KLPARADLIAGALSFTGVVILTMDDSTGLGGAALTGAAWGIFSALIFSVRNILQKYTYPD 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIP------DTLFLIGYGLLNSFVFCIFSYGIKRA 254
VV G++ L + L +S + + +KR
Sbjct: 176 VPSGTLMFHQVVATAVILIPFVDFGSVASLELDKWALIVALGVLCSSMAHTLLALSLKRL 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+V + P+L + + F+LK+ I +++ V + S + +
Sbjct: 236 PAKSVAQISCLQPVLGALLAWFVLKETIAPQVLGGGALILA---VAAWESYKQSYRPRA 291
>gi|254455599|ref|ZP_05069028.1| permease, DMT superfamily [Candidatus Pelagibacter sp. HTCC7211]
gi|207082601|gb|EDZ60027.1| permease, DMT superfamily [Candidatus Pelagibacter sp. HTCC7211]
Length = 284
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 95/287 (33%), Gaps = 7/287 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M +F ++ + + +FL + +L++ R +++ +++F +
Sbjct: 1 MKAIIFSLLGWMFLPVMDGFAKFLSDDLPILQITWARYFFTVFFTLPIMIFFFKKQLVWS 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D K + + IL F YA+ FV P+I V L E+
Sbjct: 61 DKPK------LQILRGIILLSANICFFYAISIISLAKALTLAFVAPLIVTTFSPVMLGEK 114
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A ++ L++ + L ++A + + I +
Sbjct: 115 VGFRRWTAVVVGFTGSLVVIRPGFVELNFASLAALGTGILYGFYLIITRKLSTSDNPLLT 174
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + + ++ ++ + G G+ +K A S + +
Sbjct: 175 LLMTGMVGAILVSAIIPFYWVKPSLNQWSLMAGIGVFACIGHLFLILSLKYADASKLAPL 234
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
YT + ++ + + D + I++++ + I +
Sbjct: 235 GYTEIIPNVLIGYYFFSEFPDKWTYVGLLIIILSGLYIFRREYILTR 281
>gi|254249639|ref|ZP_04942959.1| hypothetical protein BCPG_04504 [Burkholderia cenocepacia PC184]
gi|124876140|gb|EAY66130.1| hypothetical protein BCPG_04504 [Burkholderia cenocepacia PC184]
Length = 299
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 111/293 (37%), Gaps = 6/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G A L+ + Y + L ++ L++ + R++W+ PG I +L+
Sbjct: 9 RGLTLSVMASTLFALMSAYAKLLAPLTGLDIFAWRIVWTAPGALALIALRGRWPALVELA 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ + + L SA +L V F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSARDWRLLIALPASAALLGVQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L + + + F + S F
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAVEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + + L G G+L++ + + ++ GI
Sbjct: 189 VLL---CPIAFAMVATSATQVAGQPLLWAALLPGLGILSTLALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++V S+ +L + + + +G + +A+ + + + + +
Sbjct: 246 LGYVEPVLLVVVSLLLLGETLSVAQLATYGPIWVAVALTAWHSAMLMRRLPAR 298
>gi|330790843|ref|XP_003283505.1| hypothetical protein DICPUDRAFT_147163 [Dictyostelium purpureum]
gi|325086615|gb|EGC40002.1| hypothetical protein DICPUDRAFT_147163 [Dictyostelium purpureum]
Length = 462
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 95/302 (31%), Gaps = 21/302 (6%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +++ + + T+ L Q+ V ++ R+ + P ++ +
Sbjct: 25 LVLLSVCLVFSVFYIITKKTLNQIDVWVFLTLRLAIATPILWICAFIV--DTKEMLKLPN 82
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + V+ F+ L + + PV S G + ER L
Sbjct: 83 KKELLFLSLSGILSVTVNQSLFLLGLSLSTASNAAITQPAIPVFSTVFGVLLGFERKTKL 142
Query: 147 QIIAALLIILSLLIMT----------------LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ + ++ ++M L + L + + +
Sbjct: 143 KFLGIATAVIGCVLMVDFTHLTSENSSSRDILLGNLCFLGNTVAYAVFLMVQKPLGDRGI 202
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + P + + + + + P L L ++ F S+
Sbjct: 203 SAIKIMAWSFGIGSPPVILFGLLYTDNISHAVASITVWPWMAILYCAILATAYCFFASSW 262
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ ++ TV + PL + + L + + + ++V + + ++
Sbjct: 263 AVAKSNAVTVSVYLCVEPLATGILATIFLPDEILTLLNIFGGIVMVCGVALVMVSKYREK 322
Query: 309 GK 310
K
Sbjct: 323 KK 324
>gi|313906038|ref|ZP_07839391.1| protein of unknown function DUF6 transmembrane [Eubacterium
cellulosolvens 6]
gi|313469151|gb|EFR64500.1| protein of unknown function DUF6 transmembrane [Eubacterium
cellulosolvens 6]
Length = 312
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/300 (9%), Positives = 83/300 (27%), Gaps = 19/300 (6%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSL------ 80
+++ A WG T + +V R L + + L
Sbjct: 14 IYLLLAAFFWGTTFVAQDMAMEVMQPFTFNVCRFLLGSMVLIPVALLTGRIDPLSVNYRG 73
Query: 81 -------LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + GF ++ + F + ++
Sbjct: 74 AEIPGVSTPPEERRKHLLLGGFCCGLCVFLAGGFQQVGIVYTTAGKSGFVTALYIILVPI 133
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LG ++ + ++ + I+ + + + + S++ FA + + V
Sbjct: 134 LGLFIGRKC-TPMIWLSIAIAIVGFYFLCIKEDFSVNRGDLITLGSSFMFATQILTVDHF 192
Query: 194 E----GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G + + L ++ F L L + + +
Sbjct: 193 SPKCNGVQLSCLQFLVAGLLSLIPAFVFENPEFAAIQSAILPILYSAILSSGVAYTLQII 252
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G + + ++ ++ +++ IL + + +V +++ +P
Sbjct: 253 GQRGLNPTLASLLMSVESVISVLAGWIILGDTLTGKEILGCVLVFAGVILAQMPAGKPKR 312
>gi|261885048|ref|ZP_06009087.1| transporter [Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 296
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/293 (9%), Positives = 76/293 (25%), Gaps = 11/293 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G +LWG + Q+L + V ++ +R+L S + ++
Sbjct: 2 KNNSYIFGVFITLIGGVLWGFSGACGQYLFEQKGVGSDWLVPYRLLISGIILL-SVYLIK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +LV++ L + + Y++ + + + PV + +
Sbjct: 61 SPKIIFLPFKNPKNIPQILVYAIIGLMMTQYSYFYSIELSNAAVATVIQYTAPVFILIVV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
K +++A I + + H L +
Sbjct: 121 CFMDKRLPYFKELVALGFAIFGVFFLATHGDFTTLVISQKALVFCFISALCVVVYNIVPK 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I + F +
Sbjct: 181 RLNKDFPISSVLGWGLIIGGTILSLYMKVRTLDGVNDLGGYLAVGGVILFGTVLAFSFYM 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G+ S ++ P+ + L + + + ++++ +
Sbjct: 241 TGVGIIGASRASLIAAIEPVAAAFFTSVWLGDRFEFLDYLGLILIMLCAFILS 293
>gi|255528395|ref|ZP_05395196.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|296186773|ref|ZP_06855175.1| membrane protein, putative [Clostridium carboxidivorans P7]
gi|255507914|gb|EET84353.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|296048810|gb|EFG88242.1| membrane protein, putative [Clostridium carboxidivorans P7]
Length = 312
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 6/281 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG + + + R + I++++ + +
Sbjct: 10 LLLLLTACIWGFAFVAQRVGGKYIGAFTFNGVRFALGSISLIPLILFYNSSGEKHEHAKE 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
KA V + + + F ++ +F + V+ LG + +
Sbjct: 70 FKKAFLPGVAAGIFIFLGSSFQQVGIMHTTAGKAAFITGLYIVVVPILGIFLKQR-IGIN 128
Query: 147 QIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I AL+ ++ L + I + A + +
Sbjct: 129 TWIGALIAVMGLYFLCITDKFSISYGDFLELICAFFFAVQILLIDNFAKKVDNLKLAFLQ 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A ++ +V F + L G L + + + K A+ S I+
Sbjct: 189 FATCSILSLVCALFVEKIAISSIIMAIIPILYGGILSSGVAYTLQIVAQKNAEPSEAAII 248
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + IL + T + ++ I M++ +
Sbjct: 249 MSMESVFGSIGGFLILNESFGTRGILGCVLMFIGMLLAQVH 289
>gi|147672292|ref|YP_001215142.1| hypothetical protein VC0395_0301 [Vibrio cholerae O395]
gi|146314675|gb|ABQ19215.1| putative membrane protein [Vibrio cholerae O395]
gi|227015585|gb|ACP11794.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 341
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 45 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 100
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 101 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 160
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 161 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 220
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 221 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 280
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 281 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGDLLVISGVALSQLKIQRRN 331
>gi|126738309|ref|ZP_01754030.1| hypothetical protein RSK20926_07232 [Roseobacter sp. SK209-2-6]
gi|126720806|gb|EBA17511.1| hypothetical protein RSK20926_07232 [Roseobacter sp. SK209-2-6]
Length = 300
Score = 71.9 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 102/291 (35%), Gaps = 12/291 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G A + + + ++ + L V + +V+ R +L + +++ S L+
Sbjct: 5 GIALRIGATLFFTVMVVFVKLLTDEVPLGQVVFFRSAVALIPLVLFLMWTREFPSGLRTK 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
V + +L S ++ PV++V L V L E++N
Sbjct: 65 -----RPLAHVARCLLGCTALFASFASLKYLPLAHASIIGYLAPVLAVVLARVLLGEQVN 119
Query: 145 HLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ +A +L L +L++ L P L A A A I + S
Sbjct: 120 GMRWLAVVLGFLGMLVLVLPGLTAATPDQPYLIGAGLAFVMAIFTAGAKIQIRSLAQTEN 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ AL V G S + L + ++L G G+ + + ++ +++S
Sbjct: 180 AGSIAFYFALTCAVAGGVSVFWGWVLPDFLQLVYLCGAGIAGGIAHIMMTLALQHSEISK 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ EY + + +++ + D + +++ AM
Sbjct: 240 LAPFEYLSLIFAVLADFMLFGLAPDGAFYLSTLMILAAMWAITFKDRAKGR 290
>gi|322835156|ref|YP_004215182.1| hypothetical protein Rahaq_4470 [Rahnella sp. Y9602]
gi|321170357|gb|ADW76055.1| protein of unknown function DUF6 transmembrane [Rahnella sp. Y9602]
Length = 307
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/299 (10%), Positives = 89/299 (29%), Gaps = 21/299 (7%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + L+ + + RVL+ G+ + ++
Sbjct: 9 LLLLAAIWGGSFLFMRVAAPAFGAINTAFLRVLFGFVGLVVILAVLRTPRDYQHKFGRSL 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ ++ ++ ++ TP++ V LG +F E + +
Sbjct: 69 LLGVINSGLPFLMYCLAARWL------PAGYSAILNATTPLMGVVLGGLFFHETVTLKKA 122
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIA--------------VTWSAYCFARKTIPVGSSE 194
+ L + + ++T + +A + + + +
Sbjct: 123 LGVLTGLFGITLLTTTGSAESVPQLLAGVIACLVATGCYAVAGFLTRRWISERGGLDPKL 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + ++ + + + L + ++ + ++ I
Sbjct: 183 VATGSQLGATLFLLPFFLYTSATEAPVTWAQPLVWLCVLAVGFICTAWAYILYFRLIADI 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + P I+ +L + + ++ +A+ + L P +GK KT
Sbjct: 243 GPLRSMTVTFLIPPFGILWGYLLLNETLSEGFFAGGILICVAVWLVLSPGKSVAGKTKT 301
>gi|294784392|ref|ZP_06749683.1| integral membrane protein [Fusobacterium sp. 3_1_27]
gi|294487964|gb|EFG35319.1| integral membrane protein [Fusobacterium sp. 3_1_27]
Length = 287
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 92/284 (32%), Gaps = 11/284 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+++ A LWG + + + + V++ R +++ + + F + K+T+
Sbjct: 1 MIYLLIASFLWGTSFIAGKIAYSMFDPSLVVALRYIFASIILLPITISF---MHQEKETI 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + L + + P++ +G +F KE+++
Sbjct: 58 NKKDFFMLILLGILTYPLTSMLQFIGLSFTSASSATTIIGIEPIMITMIGFIFFKEKISP 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
+ ++ + + S + +S S +
Sbjct: 118 IVFFLGVVAFFGVALTVGVSALENVSFFGCFLVFLSTIVVSFWVQLSKKVLTKISSNYYT 177
Query: 205 ------IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + L + ++ G++R++ S
Sbjct: 178 ALTIQLGTLFALPIMLFLVKSWEIYYSLKGLIALLYLVVGCSIGAGWFWNKGLERSEASK 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
GI P+ I+ +V IL + ++ + I +VV++ + ++
Sbjct: 238 SGIFLALEPVFGILFAVLILGEKLNFLSIIGIVLVVLSAAICMI 281
>gi|257458443|ref|ZP_05623583.1| integral membrane domain protein [Treponema vincentii ATCC 35580]
gi|257444144|gb|EEV19247.1| integral membrane domain protein [Treponema vincentii ATCC 35580]
Length = 304
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/278 (10%), Positives = 77/278 (27%), Gaps = 4/278 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + + + + L + + ++ R + F ++ +
Sbjct: 27 KGILCIIGSAFFFTVMNLCAKLSGNLPSIQKAFFRNSIACCTSLFFLI---KSRRFILPQ 83
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
KN + + T + + + L + + + FL
Sbjct: 84 KKNLPFLILRTVLGTAGLISNFYAVSHLALADASILAKLAPFFTIFFSFLFLKERIRFTR 143
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L + A L ++ + + +IA T V+
Sbjct: 144 LLAAVCAFAASLLIIKPAFAGAGHIFAASIACFGGLCAGGAYTCVRYLLTHKESGPMVVF 203
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ ++ F ++ +L+ G + + A + + +Y
Sbjct: 204 FFSTGSMLILLPFFIYSFEPMSMQQLFWLLATGAAGAGGQFTVTAAYSYAPAKNIAVFDY 263
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYL 301
T L + + D + I+ IA++++L
Sbjct: 264 TQILFAAAFGFLLFHEIPDRYSVAGYVIICTIALILFL 301
>gi|86748450|ref|YP_484946.1| hypothetical protein RPB_1325 [Rhodopseudomonas palustris HaA2]
gi|86571478|gb|ABD06035.1| Protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris HaA2]
Length = 306
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/285 (9%), Positives = 78/285 (27%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + + R W+ ++
Sbjct: 16 YLLLSLTSLFWAGNAIVGRAAAGHFPPVTLSFLR--WACAFAIVLPFAARHLIADWGVIR 73
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + +L + +++ AL P+ + L RL
Sbjct: 74 RHLGLMIVLSIAG--ISIFNTLQYTALQYTTAINILLLQSTAPLFVAIWALIVLGVRLTL 131
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + + +L ++++ LH I L+ + Y + P +
Sbjct: 132 TQALGIMTSMLGVVVIILHGDIAQLAAIDLNRGDLMFFGALAVFGLYTALTQRRPPMHAL 191
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F L ++ + + + + ++ G++
Sbjct: 192 SFLAFSFGCGALFLIPLLVWELTTRPAPAIDLANVASLAYVVIFPSILAYLCYNRGVRLI 251
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ L + + + +V+ ++V
Sbjct: 252 GANRSAPFFHLIPVFGSAMAILFLGERPHLYHAVGYALVLTGVIV 296
>gi|58583660|ref|YP_202676.1| hypothetical protein XOO4037 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58428254|gb|AAW77291.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 309
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 97/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G + F Y + I+ + + LE + + VL+ + V F
Sbjct: 20 LKGVVLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPDDQLR 75
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L +FLKE +
Sbjct: 76 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEDV 135
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 136 HWRRWSAVIVGFIGVLIVLRPGFRHLTQGHVAAIVCGLVGAISVIALRMAGHGEKRLTLY 195
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ G F + L GYGLL Y + + +S V +
Sbjct: 196 GAGVIGPLIMGGIMMLPTFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMSPVSLVAPTQ 255
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 256 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 307
>gi|299768621|ref|YP_003730647.1| hypothetical protein AOLE_01855 [Acinetobacter sp. DR1]
gi|298698709|gb|ADI89274.1| hypothetical protein AOLE_01855 [Acinetobacter sp. DR1]
Length = 303
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 88/285 (30%), Gaps = 1/285 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + I+
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLLLIMKKGVQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + +F +
Sbjct: 69 PLKWKDAPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEKI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 RFKQWLCILLGLCGAVLVVSGDHGFGVPSPYSLLIVLAAIAWGLYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ + + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTIPLLFYSAHLPHEILHATWQANMSVVLLGIFPSAMAYVLWGYVLKNMSLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVLFLNEKPSMMVLLGGVIIVGSLVWMNW 293
>gi|294783173|ref|ZP_06748497.1| integral membrane protein [Fusobacterium sp. 1_1_41FAA]
gi|294480051|gb|EFG27828.1| integral membrane protein [Fusobacterium sp. 1_1_41FAA]
Length = 287
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/284 (9%), Positives = 84/284 (29%), Gaps = 11/284 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+++ A LWG + + + + V++ R + + + F
Sbjct: 1 MIYLLIAAFLWGTSFIAGKIAYDMLDPSLVVAIRYILASIILLPMTFSFMKKKEESFT-- 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ + L + + V+ +G +F KE+ +
Sbjct: 59 -KKDFILLVILGILTYPLTSMLQFIGLSFTSASSATTIIGIEAVMITIVGFIFFKEKASP 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
+ + ++ + + S + +S S +
Sbjct: 118 IVFLLGIIAFFGVALTVGVSALENVSFFGCFLVFLSTIVVSFWVRLSKKILTKMNSNYYT 177
Query: 205 ------IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + ++ G++R++ S
Sbjct: 178 ALTIQLGTLFALPIMLFLVKSWEIHYSLKGIIALLYLVVGCSIGAGWFWNKGLERSEASK 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G+ P+ I+ +V +L + ++ + I +V+++ + ++
Sbjct: 238 SGVFLALEPVFGILLAVLVLGEKLNFLSIIGIILVILSAAICMI 281
>gi|294340523|emb|CAZ88907.1| putative permease [Thiomonas sp. 3As]
Length = 370
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/301 (8%), Positives = 74/301 (24%), Gaps = 8/301 (2%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFA 70
L+ + + G A +L+G + + L S + + L S G+
Sbjct: 3 SSLTPPSQNASLHQGITLALVAALLFGASTPLAKLLLADTSPWLLAALLYLGSGIGLAAW 62
Query: 71 -IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ L+ + + + ++ L S + V
Sbjct: 63 RALRAVRSGEAATSHLQAGEWPWLAAAIFSGGVGAPVLLMFGLSRMPAAGASLLLNLESV 122
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCF 183
++ L +E + + I+L +++ L +
Sbjct: 123 LTALLAWFVFRENFDRRIALGMGAIVLGSVVLNWPGQGMRLDWSSLWPGLAVIGACLGWA 182
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + V +
Sbjct: 183 LDNNFTRKVALADASFVAMSKGLIAGAVNLLLAMLVGAQWPTWPIVLAAGALGFASYGVS 242
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+F ++ + AP +V +L + + + G++ + + +++
Sbjct: 243 LVLFVLALRHLGTARTSAYFAVAPFFGAALAVLLLGEALTPGLVLAGGLMALGVWLHVSE 302
Query: 304 T 304
Sbjct: 303 R 303
>gi|288924749|ref|ZP_06418686.1| integral membrane protein [Prevotella buccae D17]
gi|288338536|gb|EFC76885.1| integral membrane protein [Prevotella buccae D17]
Length = 300
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 81/287 (28%), Gaps = 3/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L A + +G PL T + + V+ V+ +R ++ +++
Sbjct: 12 SDKVKGFLAAVVAAVCYGTNPLGTLPLYADGVNSASVLFYRYGLAVLMFGVLMLFRGEHF 71
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +G+ ++ I A + + F V
Sbjct: 72 AIRPGHAIRFSLLGVFFAMSSTTLYVSFHHIAAGIASTLLFVYPVMTAVLMTVFFHERVT 131
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ L + + ++ S + + ++ A
Sbjct: 132 WGTSISILLALLGVGLLYQGDGHARLSTVGFTLVMLSSFLYAVYIISVNRWHTDMSPLKF 191
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFF-LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
VL V++ SG G L + I + +
Sbjct: 192 TFWVLVFCWATIGVFSVMSGEPLMLLHGPKQWGCATQLALLPTVLSLFFMNISINKIGST 251
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
IM P+ ++ +F+ + + ++++ + + +L
Sbjct: 252 PSAIMGALEPVTAVIIGIFVFSETFTLRLAVGILLILLGVTLIILKR 298
>gi|187925662|ref|YP_001897304.1| hypothetical protein Bphyt_3690 [Burkholderia phytofirmans PsJN]
gi|187716856|gb|ACD18080.1| protein of unknown function DUF6 transmembrane [Burkholderia
phytofirmans PsJN]
Length = 296
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 76/291 (26%), Gaps = 7/291 (2%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---LKDTL 85
+ A I+WG + + L+ + R L V IV ++
Sbjct: 1 MLIAAIIWGSAFVAQRLSLDAIGPFLFTGLRFLLGALVVLTLIVCVRRSALAELSKREPG 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +G +LA L + F + VI LG +F
Sbjct: 61 GARELLGAGALLGMVLAASISLQQIGLQYTKVANAGFISSLYVVIVPLLGVLFRHRTGIG 120
Query: 146 LQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ A L + + + + + +
Sbjct: 121 TWLGAVLAAVGMYFLSVNEHFSVLYGDWYQLAGALVISVQMMLVGRFAVRHDTLMLALVQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L +V F + L G L + I K A S ++
Sbjct: 181 FVTCGLACLVVGLAIEPISFAVIARAAPTILYGGALSVGVAYTIQVVAQKHAAPSHAAVI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ +++ +L + + +++ ++V + G+ +
Sbjct: 241 FSMEGVFAALAAWLVLGETLSARALFGCALMLAGLIVCQVMPAWQRGRERV 291
>gi|78212705|ref|YP_381484.1| hypothetical protein Syncc9605_1174 [Synechococcus sp. CC9605]
gi|78197164|gb|ABB34929.1| putative membrane protein [Synechococcus sp. CC9605]
Length = 302
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ G+ + + + + + + + L V V E++ R L S+ +
Sbjct: 12 NRDSVRGSRALILSSLAFSLMTVCVKQLNSRVPVAEIVLCRALISIVLTAVGLRLAG--- 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ G+LV + ++ F A+ + + P + +
Sbjct: 69 -----VYPWGQRRGLLVVRGVLGSLALLCFFEAIDQLPLASATVLQYTYPTFTAVAALLL 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGS 192
L E L A LL + + ++ + + + A A + V
Sbjct: 124 LGEPLRRRISAAVLLGWIGVTLVVQPQWLTGTAQPEQLIPALIGISGALMTALAYVSVRR 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ + V + + +L+G G++ + G++
Sbjct: 184 LSQTEHSLVIILYFPMISVPLTLPWVLQQGVWPQGIEWFWLLGVGVMTQLGQIWVTEGLR 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + Y + + I+ + +V+ A ++ L S
Sbjct: 244 CLPAARATSINYVQVVFAAGWGWLWFAESINAWQVGGGMLVLAATLISLSAREKKSSLR 302
>gi|134299383|ref|YP_001112879.1| hypothetical protein Dred_1524 [Desulfotomaculum reducens MI-1]
gi|134052083|gb|ABO50054.1| protein of unknown function DUF6, transmembrane [Desulfotomaculum
reducens MI-1]
Length = 312
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/291 (8%), Positives = 87/291 (29%), Gaps = 25/291 (8%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + + L+++ L ++ R + + + +KD
Sbjct: 7 LLLLTVSFFWGTSFAAAKIGLQELHPLNLVILRFTIASVIFYVLLQIRKERAIEVKD--- 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ + ++ L ++ +P++ +G+ E+++
Sbjct: 64 ---IPTFIILGFMGITSYFYIQFTGLQYTNTIHSALIIATSPIMVAIIGAALKIEKISRA 120
Query: 147 QIIAALLIILSLLIMTLHSGIP------------------LLSLAIAVTWSAYCFARKTI 188
L + + ++ ++ +
Sbjct: 121 MSCGIALSFIGVSLVISEGNWAGIFQSTTIKGDLMLLSNAIVWAGFTLYGKKILLKYSPF 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ F + +L + A+ ++ + L + L + + + ++
Sbjct: 181 VAMAYIHIFGTLLLLPLLAVPDLLGTHSLMKQLAELSWPTVSAALYLALFCSVYAYFVWY 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+++ + Y PL ++ V +L + I + +V+ + +
Sbjct: 241 AGVEKIGAIRTSVFAYFNPLFATLTGVLLLNEKISFITIFGGCMVMAGVYI 291
>gi|300857065|ref|YP_003782049.1| hypothetical protein CLJU_c39220 [Clostridium ljungdahlii DSM
13528]
gi|300437180|gb|ADK16947.1| putative membrane protein [Clostridium ljungdahlii DSM 13528]
Length = 295
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 90/282 (31%), Gaps = 10/282 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G++ +F A +WG + +++ LE +S + ++ R + +F +++F
Sbjct: 2 KKRLIGSMCLFLAACIWGGMYVVSKYILEFISPITLVWIRYAIAFVVLFLILMFF-NYKK 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K +K + + + + S TPV + L
Sbjct: 61 GRKVVIKKKDWLLIAWIGFIGYFISICLQFMGTKLSDAHMGSLITASTPVFVIIFARFIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS--------LAIAVTWSAYCFARKTIPVG 191
KE ++I+ +L ++I+ + + A A + +
Sbjct: 121 KELFTKKKMISLILATFGVIIVIGLDSMFMKHLLGNIILVGAAVTWALASVYLKIVSKRF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+S + A+ ++ + + + + F +++ GI
Sbjct: 181 NSLIITTYAMLFALIFTTPLMLTQHNNFTLILNNRNLILGIIYLGVVSTAGAFFLWNKGI 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + + P+ + L + + I ++
Sbjct: 241 GLMDVGIGSLFLFFQPVTGSIFGWLYLHEQLTFGFFIGGTLI 282
>gi|298292424|ref|YP_003694363.1| hypothetical protein Snov_2449 [Starkeya novella DSM 506]
gi|296928935|gb|ADH89744.1| protein of unknown function DUF6 transmembrane [Starkeya novella
DSM 506]
Length = 314
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 93/297 (31%), Gaps = 12/297 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPG-VFFAIVYFSGGLSL 80
+ G F +L+ + + + E + +++ R+ +SLP + + + +
Sbjct: 15 LTGYAFGAAGAVLFASKGIIIKLAYAEGIDPETLLALRMAFSLPFYLVIGGIAIAQMRAK 74
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L A L + P+ V G++
Sbjct: 75 GEALPGLRIVLQSLFVGALGYWFSSYADFLGLAHISASFERLILYTYPLFVVLFGALLFG 134
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ + + A L ++ + L A A+T++ Y +
Sbjct: 135 QPIRMKALWAFAAAYSGLALIFAQNFSANATNTVHGSLWVGAAAITFALYQLMASRLLKS 194
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + +++ + + + + L ++ + + +
Sbjct: 195 IGSALFTCIAMISASVVSIGQFVVVRPLDALAISPHGLMLAVMIAIGATVLPSFLMNAAL 254
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
KR ++ +P++ +V +V IL + + + +V++++ + L
Sbjct: 255 KRISAQANSMISTVSPVVTMVLAVLILGESVSGIELAGAAMVLVSIGWFTLSDSRRR 311
>gi|228913270|ref|ZP_04076904.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|301052232|ref|YP_003790443.1| putative DMT family transporter [Bacillus anthracis CI]
gi|228846321|gb|EEM91339.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|300374401|gb|ADK03305.1| probable transporter, DMT family [Bacillus cereus biovar anthracis
str. CI]
Length = 310
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGIFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFEQRKFPAPIQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTIVVIGWGMLIGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQ 298
>gi|163786688|ref|ZP_02181136.1| hypothetical protein FBALC1_15922 [Flavobacteriales bacterium
ALC-1]
gi|159878548|gb|EDP72604.1| hypothetical protein FBALC1_15922 [Flavobacteriales bacterium
ALC-1]
Length = 287
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 103/292 (35%), Gaps = 9/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++ A + + +++ +S ++ R +++ + Y L
Sbjct: 2 SENSHIKHVFWLTLATVFISTSGALGKYIA-MSPPVIVWWRSVFAAVFLLLFCWYKGIHL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + K + + SA + HW + YAL + S F PV + L F
Sbjct: 61 KI-----NSRKDLWTFILSALFMGAHWITYFYALKLSNVAIGMLSLFTFPVFTAILEPFF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
K + + + I+ L+++L + I+ L + + + + R +
Sbjct: 116 TKVKFDPMHIVLGLIVLLGIYILAPEFDLESSQLQGILLGLLSALCYALRTLLLKKHVFN 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + A+ V F ++ L + +F +K K
Sbjct: 176 YDPTVLMFYQVAVLSFVLIPFLFFMEISNIKTQYPYVILLALLTTAIGHTMFVNSLKYFK 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ST I+ P+ I+ + F LK+ + +++ +V+ + +
Sbjct: 236 VSTASIIGSAQPVFGIIIAFFFLKEIPTIHTFVGGALILATVVIESIRSKTK 287
>gi|260464401|ref|ZP_05812592.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259029871|gb|EEW31156.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 297
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/279 (10%), Positives = 73/279 (26%), Gaps = 1/279 (0%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ V + W + L LE+ + R + + L + +
Sbjct: 19 IVAVALTVVGWASAFPAIRAGLAAFQPLELGAMRFAIAAVPAAIFLAVKRPALPRIGELW 78
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + V T + + A S + +++ L
Sbjct: 79 RFAFGGAIFVALYTAMLNFGELTVSAGAAGFIINVSPIFTAIMAMALLGERFSGMAWLGT 138
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ A + II LH L + + SA + I + +
Sbjct: 139 VISFAGIGIIAMADGNGLHFNAGALLVLGSALCSAVNTIVQKPLFARHHPLTISASNMVL 198
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL + + + + + + + ++ + R + Y
Sbjct: 199 GALCLAPFLPAAFQQAAVADTAGLGAVIYLGIVPSLIAYAAWATALSRLPAARASNFLYL 258
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + F L + + + + + ++V L
Sbjct: 259 VSPVSALIGFFWLGEVPTLLGILGGALALGGVIVVNLKR 297
>gi|229155388|ref|ZP_04283498.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 4342]
gi|228628103|gb|EEK84820.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 4342]
Length = 321
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 95/297 (31%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 4 NRLKGIIMVVIGACLWGLSGTAAQQLFQSEHVSTEWLVTIRLLISGVILLIISSFGTNKK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 64 EIFGIWKRKSNAYKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 124 WNVRPSKIDFISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKGLL 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + E L + + +F
Sbjct: 184 ERWSSSVIVGWGMIIGGIGVTIVQFITTNEFILLSTMKYVKLSTLPLITFVVIFGTLIAF 243
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V+I +++
Sbjct: 244 YLYLDSIRYLTPKETILFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIIMVLILS 300
>gi|60682395|ref|YP_212539.1| hypothetical protein BF2925 [Bacteroides fragilis NCTC 9343]
gi|60493829|emb|CAH08620.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
Length = 314
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 95/291 (32%), Gaps = 15/291 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + A +G+ PL+T L E +SV V+ +R +++ + +
Sbjct: 8 NSKAKGFVCGAVAAATYGMNPLFTLPLYKEGMSVDSVLFYRYGFAVLILGILMKVQGQSF 67
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L K+ + + + + + S FV PV+ + +F
Sbjct: 68 ALKKNEVLPLIV------GGLLFSASSLLLFLSYKHMDAGIASTILFVYPVMVALIMFLF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPVG 191
E+++ L + LL + + ++ G LL + +++++ Y +
Sbjct: 122 FHEKVSLLTVFCILLALSGIGLLYKGEGGETLSLVGMLLVILSSLSYAVYIVGVNHSTLK 181
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ L Y+V F L L + I
Sbjct: 182 LMSTAKLTFYALLFGLSIYIVRLNFCSDLQAVPSLPAWGNILAMAFLPTVISLVCTAVSI 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ I+ P+ + V I + + + ++++A+ ++
Sbjct: 242 HTIGSTSTAILGALEPVTALFFGVMIFGERLTPRLMLGILMILVAVTFIVV 292
>gi|293115533|ref|ZP_05791975.2| integral membrane domain protein [Butyrivibrio crossotus DSM 2876]
gi|292809347|gb|EFF68552.1| integral membrane domain protein [Butyrivibrio crossotus DSM 2876]
Length = 268
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 82/271 (30%), Gaps = 8/271 (2%)
Query: 40 TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
L+ + + E R + + IV + A+ L +
Sbjct: 1 MNLFVKKAGNLPSFEKSFFRNIIAFFFALGVIV------KSKEKVNIPKDALPALFMRSI 54
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
V YA+ S ++P + + LKE++ Q I ++ + L
Sbjct: 55 GGTVGILCNFYAIDHIVIADASMLNKLSPFFVLIFSYLILKEKVKLYQGICIIVAFIGSL 114
Query: 160 IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--FIEMCVLAIPALFYVVWNGFS 217
+ + + + A + A G ++A + F +
Sbjct: 115 FVIKPTADIIHNPASLMGMLGGLGAGIAYTFVRIAGKKGVKSPVIVAFFSGFSSLVTLPL 174
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
F +FLI GL + + A + + +Y+ + + +
Sbjct: 175 MIMDFEPMTAAQLMFLILAGLAATGGQFGITLAYTFAPAREISVYDYSQIIFATILGILF 234
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
L + D + +GI++ A +V + +
Sbjct: 235 LGELPDKYSFVGYGIIISASLVMFILNNRKT 265
>gi|239994283|ref|ZP_04714807.1| hypothetical protein AmacA2_07339 [Alteromonas macleodii ATCC
27126]
Length = 309
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 98/298 (32%), Gaps = 12/298 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
S A G + A + G+ + LE V + ++ R L SLP + ++
Sbjct: 3 SSSVAEKEQSKGIKMLLVAVLCLGLNWPGMKLGLEIVGPVWMVCLRFLLSLPVLALFVLI 62
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L +L ++ V + + +L S + TP+ +
Sbjct: 63 TKKRLPVLNRKDRSVVFVVAFFQFILSMGL----ITVSLQFIPAGTASILIYTTPLWMLL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARK 186
+ +++ ++R ++I + + ++ SG P L + A+ A
Sbjct: 119 IDTLWYRQRPPSKRLILTGISTIGCAMILFASGQPGAWLPLFGMLLASALWAVAIRRVSF 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
GS +A A+ + L + F +
Sbjct: 179 HKWKGSVIEAVFWQFTIAGFAMLAIALIVEPTPNFGAYDISDWLLLAYIGPVATGLGFGL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + ++ P++ VSSV +LK+ + + +++ A++V LP
Sbjct: 239 MVAAGPKLPPDKIVLISTLTPIVGYVSSVILLKETLLPMVMAGAILMIAALIVNGLPQ 296
>gi|320528171|ref|ZP_08029336.1| integral membrane protein DUF6 [Solobacterium moorei F0204]
gi|320131519|gb|EFW24084.1| integral membrane protein DUF6 [Solobacterium moorei F0204]
Length = 304
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 86/286 (30%), Gaps = 7/286 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A I+WG + + + + R L + + I + +
Sbjct: 10 LLLILASIIWGCAFVAQNVGMNYIGPWTFSTIRFLIAGFSLLAIIPILDKKRTHVIRPKT 69
Query: 87 NPKAVGM------LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + +I ++ + + + + Y + + L +
Sbjct: 70 KEEKMKLLLGSVLCGLALSIGSIVQQIAMLTVPVAKAGFLTTLYVLFVPMITLLFGKKIP 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++ +A + L + L GI + L +A A + +
Sbjct: 130 LKVWIGIAMALFGLYLLSMAGNLAIGIGEILLILAAFLFAIHIIIIGHFSTRVDPVRLSC 189
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L I V+ L + + + + K A + G
Sbjct: 190 GQLLIGGFATVIPMIVIEKPTMGSILAAYIPLLYTGIFSSCVAYTLQIFAQKEANPTIAG 249
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ + ++ IL Q ++T I ++ IA+V+ LP
Sbjct: 250 MLLSLESVFAALAGYLILHQVLNTRELIGCVVIFIAIVIAQLPDRR 295
>gi|123966256|ref|YP_001011337.1| integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9515]
gi|123200622|gb|ABM72230.1| Integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9515]
Length = 295
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 98/285 (34%), Gaps = 15/285 (5%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + L + ++ + + E++ R L+SL I +
Sbjct: 18 LIFASFFFSLMTLCVKKIDNGIPIYELVFFRSLFSLLITSLII--------NKRKVNPWG 69
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K +L+ + + YA+ +++ + P+ + + E+++ I
Sbjct: 70 KNKPLLILRGLLGTIALVCIFYAIRNMPLNISTVIQYTYPIFISIFAGILINEKISKNII 129
Query: 149 IAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
IA+L +LI+ + L++ + A + I V +
Sbjct: 130 IASLAGWFGILIILNPYQLSSLNIEIDKISVLIAFLGAISTSLAYITVKKLSLSEDIFVI 189
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L V+ ++ NI D +++IG G+ + G+K+ S +
Sbjct: 190 IKYFPLISVITLSPIVFFNWVTPNINDLIWIIGIGMFTQAGQTFLTIGLKKLPTSEAATI 249
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y L + + + I+ I +V++ ++ +
Sbjct: 250 NYLQVLFGSIWGIIFFNELININFIIGSLLVLLGTIISTSKIMKK 294
>gi|324324286|gb|ADY19546.1| hypothetical protein YBT020_01470 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 306
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLL----FSFKQLKKSVVH 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 60 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEKIQL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L +L++T+ S +++ A ++ + +
Sbjct: 120 NYWIGIVLGAAGVLLITIPSSNGNQEVSLIGDTLILLSTFLFAFYTVLLKRPKQEQYLSN 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 180 KVFTTLTLIIGAVILLPFAMVETFYYGFPEIETWKTGFSVMYLVIGATILAYWFWNRALE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 240 TVSASVSGLYLNALPLISIVASIALLDESLTWKIVMGGSLVLIGV 284
Score = 40.7 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ + +P
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLLFSFKQLKKSVVHKQVP 63
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S LK+ I I
Sbjct: 64 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEKIQLNYWI 123
Query: 289 VFGIVVIAMVVYLLPT 304
+ +++ +P+
Sbjct: 124 GIVLGAAGVLLITIPS 139
>gi|313124690|ref|YP_004034949.1| permease of the drug/metabolite transporter (dmt) superfamily
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312281253|gb|ADQ61972.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 303
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 96/297 (32%), Gaps = 10/297 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L LWG + + L Q ++ ++ R + + + +G
Sbjct: 6 LGILLAITGAALWGTSGTAAEMLYQSPNINTFWLVDVRSWLAGASLLLISLVHNG-KGTF 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +FS + + Y + + F+ PV+ + + ++
Sbjct: 65 AIFKNPRDLLYAALFSMLGITGAQFTYFYTVAASSAPTATVLVFLAPVLIICFMAAKTRQ 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF----- 196
+ +IA LL ++ +++ + L++ + A +
Sbjct: 125 MPRRIDLIAVLLAVVGTVVLVTNGNFSHLAVTPKTLVWGFFSALTQALAIAMPAKLFKKY 184
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I + + ++ + + +L + F + ++ +
Sbjct: 185 GTITILAWGMLLGGIILSPALAVMPATGVTVNEWSLVIYIVIAGTVFAYSLYLSSVMYIS 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++E PL+ + SV +L +++ ++++A + ++P+ +
Sbjct: 245 AGLASMLEAFEPLVATILSVTLLGSDFGSMKMAGGVLIILATWLQVVPSPRRGKLQR 301
>gi|302763407|ref|XP_002965125.1| hypothetical protein SELMODRAFT_270472 [Selaginella moellendorffii]
gi|300167358|gb|EFJ33963.1| hypothetical protein SELMODRAFT_270472 [Selaginella moellendorffii]
Length = 455
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/294 (8%), Positives = 72/294 (24%), Gaps = 21/294 (7%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + WG + + L + V S R++ + +
Sbjct: 151 LLLISPFFFWGTAMVAMKGVLPKAGPYFVASTRLVPAGLLLVGFASLRGRKQPSGLYAWL 210
Query: 87 NPKAVGMLVFSATILAVH---------------WGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ ++ S + + + + +
Sbjct: 211 SILVFSIVDASCFQGFLAAGLGKTSAGLGSVIIDSQPLTVAILASILFNETIKPLGALGL 270
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ + L + + A L + + + +A A
Sbjct: 271 LLGVAGLLLLEVPAESLGALLSSGGGIEFSSSFWSSGEWYMLLAAQSMALGTLLVRWVCK 330
Query: 192 SSEGFFIEMCVLAIPALFYVVW-----NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
S+ + I L ++ G L ++ + +
Sbjct: 331 FSDPIMATGWHMIIGGLPLLLLAASNNEPALNGHLEDLMVSDWASLAYTSIFGSAISYGV 390
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F Y + L+ + + + P+ +L + ++ + + I + + +
Sbjct: 391 FFYNATKGSLTKLSSLTFLTPMFAAFFGYLVLDESLNGAQILGATITLAGIYLV 444
>gi|188590954|ref|YP_001795554.1| hypothetical protein RALTA_A0159 [Cupriavidus taiwanensis LMG
19424]
gi|170937848|emb|CAP62832.1| conserved hypothetical protein, DUF6; putative membrane protein
[Cupriavidus taiwanensis LMG 19424]
Length = 295
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 93/300 (31%), Gaps = 11/300 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ P G + A +L G + L+V+ R L+ + + G
Sbjct: 2 PSQQPQRGGAWRMVAAMVLSGTIGWFV-VTSGQPPLDVVFFRCLFGGAALLGVLTLQRGW 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + L ++W A + + Y P + L SV
Sbjct: 61 VRMTRAQAGWLVL------GGVTLVLNWLALFSAYAYSGIAIATVVYHTQPFFLLMLTSV 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTL----HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+E ++ +L ++++T G +L+ +A +A T+
Sbjct: 115 LQREPFPFARLPWLVLAFAGVMLITGLEHGAGGASMLAGIGLGLLAALLYAVTTLATRRL 174
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L ++ + G L + ++ + +R
Sbjct: 175 QAIPPGQIAGLQMVLGVLMLAPLAHPAAGSYGGGTWGALLALGLVHTGVMYTLLYGAFQR 234
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ ++ + + PL+ IV V + + ++ +V++ +V L + +
Sbjct: 235 LSVVSIATLSFIYPLVAIVIDVMVFGVVLGPLQVAGMALVLLGVVANQLGWALPLRRRAR 294
>gi|160939305|ref|ZP_02086656.1| hypothetical protein CLOBOL_04199 [Clostridium bolteae ATCC
BAA-613]
gi|158438268|gb|EDP16028.1| hypothetical protein CLOBOL_04199 [Clostridium bolteae ATCC
BAA-613]
Length = 305
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 82/291 (28%), Gaps = 11/291 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL- 85
L + +WG+ + ++ V L R L + I +F +
Sbjct: 7 LLLLLTASIWGVAFVAQSVGMDYVGPLTFNCVRCLMGGVVLLPCIWFFDRKNKRKEQVPV 66
Query: 86 ---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + L + F + + F VI LG + K+
Sbjct: 67 IPGARKTLIIGGICCGVALCLASNFQQFGIQYTTVGKAGFITACYIVIVPVLGLLLGKKC 126
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLS-----LAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + A +L + L ++ + G ++ + + A +G
Sbjct: 127 -SPVVAGAVVLSLAGLYMLCMKGGELSVNKGDLLMLVCAFLFAVHIMIIDFFSPVVDGVK 185
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + L + + + G K +
Sbjct: 186 MSCIQFFVSGILSGAAMLIYETPEWSQIIAAWAPVLYAGIMSCGVAYTLQIVGQKGMNPT 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ + +++ IL Q + + + ++ A+++ +P
Sbjct: 246 VASLILSLESSISVLAGWVILGQRLSSKEVLGCALMFGAIILAQIPVGRRR 296
>gi|126652899|ref|ZP_01725042.1| transporter [Bacillus sp. B14905]
gi|126590319|gb|EAZ84440.1| transporter [Bacillus sp. B14905]
Length = 298
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 88/287 (30%), Gaps = 13/287 (4%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ I+WG + T LE ++ +V++ R L + + + +
Sbjct: 9 MLLVTAIVWGSGFVITAIALEYLTAYQVMAGRFLLASIILTVLF--------GSRLKKAS 60
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ TIL + + L +F V VI + K R++ +
Sbjct: 61 KSVIWKGALLGTILYIAFALQTVGLQYTTPSKNAFLTAVNVVIVPLIAYAVYKRRIDGYE 120
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
II +L+ I+ + ++L + + A FA + + I
Sbjct: 121 IIGSLIAIIGIGFLSLQGSLTMNIGDALSLACAVAFAFDIFCTNLFVQKEDAIALTIIQF 180
Query: 208 LFYVVWNGFSGGEHFFLGNI----PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + + + + + + I+
Sbjct: 181 LTASFIGILVVISQGEIPTSLEKEAIYSIIYLGIFSTTIAYLFQNVANQYTTATKAAIIL 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T ++ SV L + + + + ++++A+++ + K
Sbjct: 241 STESFFGMILSVIFLHEILTSRMVVGAVLILLAILIAEVKPAHPKKK 287
>gi|307307317|ref|ZP_07587053.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
gi|306901831|gb|EFN32431.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
Length = 314
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 83/300 (27%), Gaps = 13/300 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + + + L + I W + + L +V L + + R + I +
Sbjct: 21 NAADIPMTPFLPALAIAGTVITWSFSFAAIGYALREVEPLPLAAIRFALAAVFAIAWIAW 80
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
V + + +A + F F P+ V
Sbjct: 81 RR------PRCFLPRDFVVLAISGLLGIAAYNVFLNLGQAAVSAGAAGFIVNTQPLFMVL 134
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKT 187
L +FLKER + ++ + ++ G + +A +A +
Sbjct: 135 LAVLFLKERFGRWNWVGTIVGFSGVALIASGQPGGLSFGTGSTLIVLAAACAAAYSILQR 194
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+E + V+ AL W + + + +
Sbjct: 195 PLFARAEPLDVTALVIVAGALALTPWLPAGVSQLMRARPDTWLMIMFLAIGPGIIGQSCW 254
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y +K + G Y P + + +L + + + + +++ +
Sbjct: 255 TYALKSFGAARAGQFLYLVPPSSVGLAWLLLGEIPQANTILGGALALAGVIIVNSWGRRS 314
>gi|255066058|ref|ZP_05317913.1| protein RarD [Neisseria sicca ATCC 29256]
gi|255049603|gb|EET45067.1| protein RarD [Neisseria sicca ATCC 29256]
Length = 316
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 118/290 (40%), Gaps = 4/290 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SLL 81
G + + +L+ + LY ++ ++ EV + R++ L + + G +
Sbjct: 26 KGLVAALASNLLFSMLFLYGTWMRPMTGTEVFAWRMVAMLVAICVLMGMSDGWKAAGQFV 85
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++T +N K +++ + A F+++ + +G + YF+ P+ + G ++ KE
Sbjct: 86 RETGRNWKRWFLIMLPTPVFASQLWLFVWSPVNGEGVNVAMGYFLFPLAMLACGRIWFKE 145
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LN LQI+A + L + + SG + V + + +G +
Sbjct: 146 TLNRLQIVAVVSACLGVAWELVRSG-AFSWATVWVFGTYPIYYLVRRKLGVPALIGLTFD 204
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L I + + F++ G+ ++ + + ++ G+
Sbjct: 205 LLVIAPCALFYILTQTDTINLIASTPKLIGFIVLLGINSAVAMHLNLKASQLLPIAVFGM 264
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y P+L+ + S+ L +P+++ I +G + + + + ++ + +
Sbjct: 265 LSYLEPVLLFIISIAWLGEPLESGALISYGFIWLGLSLMMVNGWLAMKRR 314
>gi|166710474|ref|ZP_02241681.1| hypothetical protein Xoryp_03115 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 291
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/292 (17%), Positives = 97/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G + F Y + I+ + + LE + + VL+ + V F
Sbjct: 2 LKGVVLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPDDQLR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L +FLKE +
Sbjct: 58 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEDV 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 118 HWRRWSAVIVGFIGVLIVLRPGFRHLTQGHVAAIACGLVGAISVIALRMAGHGEKRLTLY 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V G F + L GYGLL Y + + +S V +
Sbjct: 178 GAGVIGPLVMGGIMMLPTFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMSPVSLVAPTQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 289
>gi|152991109|ref|YP_001356831.1| hypothetical protein NIS_1366 [Nitratiruptor sp. SB155-2]
gi|151422970|dbj|BAF70474.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 292
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 95/292 (32%), Gaps = 24/292 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L++ A L+ ++ + L + LEV+ R ++ + + +++ K
Sbjct: 6 KGVLYMLIASFLFAGMGVFAKLLSHTLPSLEVVFFRNVFGVLLIGASLL--------HKP 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L F I + F Y + +P+ + +FL E L
Sbjct: 58 MKHEGGRPWLLFFRGFIGFLALLMFFYDIAHIPLGEAMTYSKTSPIWTAIFAFIFLHEVL 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------------AYCFARKTIP 189
+ Q +A L ++ +T P + S + + I
Sbjct: 118 SGRQWMAVFLGFFGIVFITDPFHTPFDKYDLLGILSGIGAALAYTSVRELKRYYDTRAIV 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ I VL + A + F + + ++ GLL +F +
Sbjct: 178 LSFMGVGTIGPVVLMLLAPYIESQELDFMFASFVMPKGVLWIQIVAMGLLATFAQIFMTK 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP-IDTVRTIVFGIVVIAMVVY 300
K VG + Y+ I+ + L P ++ + +VI+ ++
Sbjct: 238 AYGVTKAGIVGAVSYSNIAFSILFGLLFLGDPIPSPIKILGIIFIVISGILV 289
>gi|293609810|ref|ZP_06692112.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828262|gb|EFF86625.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 314
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 118/293 (40%), Gaps = 5/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A +G+ YTQ L Q+ + R++ +LP + + + + ++
Sbjct: 3 KGVILSVMASFTFGVLYFYTQLLSQLDSEQTFGWRIIATLPFLTLFMWWSGDLAYIKNIY 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV E
Sbjct: 63 QRILAKPSLLLLLITTSILTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++ Q +A +L ++ + G A+ + F + + G F
Sbjct: 123 KISKFQWVAIILAVIGVSHEIWRLGSIAWETALVAVGYSAYFLLRKKIKTDNLGGFWWDL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ +P Y+ G F + + +L++ + + L G+
Sbjct: 183 VIIMPVAIYLTHTGLLPYSKFIDPPSLSLIIIGLG-ILSAIGLGSYILASRFLPLVVFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ ++ +L + I + + A+ V +L I+ + + K
Sbjct: 242 LGYLEPVLLALA-SLVLGESIGQEEWFTYIPIWCAVFVLVLEGAIHLYQQRQK 293
>gi|289523879|ref|ZP_06440733.1| putative integral membrane protein DUF6 [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502535|gb|EFD23699.1| putative integral membrane protein DUF6 [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 303
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 86/290 (29%), Gaps = 12/290 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + A + WG + + + + + S ++ R L + +
Sbjct: 2 SMSRRNRAFIEAALATMFWGASFVAMKIAVNETSPSMIVWFRSLAGFGVLSLWLW----K 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + M + H AL T Q +++ TP+I G +
Sbjct: 58 RKNGGTYVAPKDLLYMAALGLMGVTFHNLIQAEALKTAQAATSAWIVSTTPLIIALFGRI 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKER+ +I L +L++ L A F
Sbjct: 118 FLKERIAREGVIGLFSAALGVLLVLGEGSSLLPKGITVGDLLISLSAINWAAFTVISRKF 177
Query: 198 IE-------MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+E + + + + G L L + + +
Sbjct: 178 LERRDQIVSLFYIMSFGWLFSNIPAYFSGFSLSFSWQAWISLLFLGVLCSGIAYIFWYEA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ S VG+ Y PL +++V +L + + +V++ + +
Sbjct: 238 LYALPASQVGVFMYLNPLTATITAVILLSESLSLKDATGALLVLLGLWMV 287
>gi|258513802|ref|YP_003190024.1| hypothetical protein Dtox_0473 [Desulfotomaculum acetoxidans DSM
771]
gi|257777507|gb|ACV61401.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
acetoxidans DSM 771]
Length = 317
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 84/293 (28%), Gaps = 17/293 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A + W + + + + R + + F I+ F
Sbjct: 17 YMLLTLATLFWAGNTVVGKAANLLIPAFSLSFWRWVVA----LFLILPFGVRAVQRDWDF 72
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + + F +AL S + P++ FL + ++
Sbjct: 73 YCKNWKYLMMLAFFSVTAFNTFLYWALNWTTAINVSVIFATMPLVIFFLSWMVGGQKAKV 132
Query: 146 LQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
QII LL ++ +LI+ ++ G L+ +++ +K
Sbjct: 133 NQIIGVLLALIGVLIVISKGNISILMNLNINYGDILVLVSVVCFGIYSILFKKLQADVDQ 192
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G + + F + + L + F ++ I+
Sbjct: 193 IGLITVFIFFGLIGIAPFYAWDIYQHHFFSVDIKMVWILLYVGLFPSLLSFFFWNKAIES 252
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
G+ P+ V +V LK+ I ++ I +
Sbjct: 253 GGAHIAGMFFNLVPVFSSVLAVIFLKEIFTLSHLIGMVLIFIGIYFSTFYEHR 305
Score = 36.8 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 13/134 (9%), Positives = 39/134 (29%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
P + L +A + A F + + + + + +
Sbjct: 16 PYMLLTLATLFWAGNTVVGKAANLLIPAFSLSFWRWVVALFLILPFGVRAVQRDWDFYCK 75
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
++ + + + V ++ T PL++ S + Q +
Sbjct: 76 NWKYLMMLAFFSVTAFNTFLYWALNWTTAINVSVIFATMPLVIFFLSWMVGGQKAKVNQI 135
Query: 288 IVFGIVVIAMVVYL 301
I + +I +++ +
Sbjct: 136 IGVLLALIGVLIVI 149
>gi|300768502|ref|ZP_07078401.1| DMT superfamily drug/metabolite transporter [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|300493809|gb|EFK28978.1| DMT superfamily drug/metabolite transporter [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
Length = 321
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/299 (9%), Positives = 82/299 (27%), Gaps = 12/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + WGI+ Q L ++ + + R+L + + +
Sbjct: 17 SREFKGIFLASISATFWGISGAVAQTLFDTTDINSIWLTGIRMLGAGIALLLVSLLTHVD 76
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + ++ + + + A+ + F+ PV V
Sbjct: 77 LWSIWRQPRDLLQIVAYTLLGLMPV--QFTYFLAVEASNAATGTILQFMGPVFIALWMLV 134
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
++ + +A + +L ++ H + L + S+ +
Sbjct: 135 AHRQLPTRAEGLAIICALLGSFLLVTHGNPQTLVISVWALIWGLLSGVSSATNTLLPTKL 194
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + H L + + F F
Sbjct: 195 LTKYDPMTVNTWSMLLGGILFNIVQPVWSIHIPLTMLNISKLTFVVLFGTLLAFLFFLQS 254
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + + V +++ PL + +V +L + + +++ + + + N
Sbjct: 255 LQYIRPTVVSLLDAFEPLSATIIAVVLLGVSFGWLDILGSVLIISTVFILAIGQGPNDR 313
>gi|209549466|ref|YP_002281383.1| hypothetical protein Rleg2_1872 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535222|gb|ACI55157.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 318
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/323 (12%), Positives = 106/323 (32%), Gaps = 19/323 (5%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVL 61
A+ S +S+ A ++ G + A ++ +++ E +S +V +R
Sbjct: 2 ASSPHESAAMSEHPAHQNSLQGMAIMSGAMLILPTMDAIAKYMATFEAMSPGQVTFYRFF 61
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
+ L + G +L + K M + + F A+
Sbjct: 62 FQLACTLPILFAVFGLKAL------SAKRPWMNLLRGVLHGAASLLFFVAVKYMPLADVF 115
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY 181
YFV P + + ++FL E++ + +A ++ +I+ S A+ A+
Sbjct: 116 AIYFVEPFMLTAMSALFLGEKVGWRRWMAIVVGFGGAMIVIQPSYEIFGLKALLPVACAF 175
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS----------GGEHFFLGNIPDTL 231
F+ + + + + + ++ + + +
Sbjct: 176 LFSLYLFLNRAIGEADSPLTMQTMSGIGGTLFMAAALFVGSGSGNADFAMSLPSSGLGLV 235
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
L+ G ++ + + + A LS + +Y + V + + + I
Sbjct: 236 LLLALGSISGYAHLLIVRAFRLAPLSLLAPFQYFEIISATVLGYALFNDFPNFSKWIGIF 295
Query: 292 IVVIAMVVYLLPTVINSGKNKTK 314
I+V + + + + + K+
Sbjct: 296 IIVASGLFIIWRERLQARSLKSS 318
>gi|90579487|ref|ZP_01235296.1| hypothetical protein VAS14_00956 [Vibrio angustum S14]
gi|90439061|gb|EAS64243.1| hypothetical protein VAS14_00956 [Vibrio angustum S14]
Length = 312
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 82/284 (28%), Gaps = 12/284 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G ++ L+ I P++ + Q + ++S R + S+P +++
Sbjct: 24 KGIVYALIGTALFSIKPVFIKLAYQYGGDAVSIMSLRAISSVPIYIIMMLWLLR--KTEH 81
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ V I A+ L F+ P V + LK++
Sbjct: 82 RDNLKQYGLAASAIGVLGYYVASYLDIAAMAHISAQLERLLIFLFPSFVVLISWTVLKQK 141
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------WSAYCFARKTIPVGSSE 194
A L + + H + + + + A +
Sbjct: 142 PAQGTFKAIALGYTGVAFIVFHDLGSMGNNVLLGSGLAIASAFVFACYLIMSKKLITQMG 201
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + ++ + + G L + L + + +++
Sbjct: 202 SQLFTCIGMGSAGIIILIQSQWQGVNVIDLDPMLILLGIALGIFCTVLPSFFVAAAMQKL 261
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S + + P + V ++ +L +P I VV +++
Sbjct: 262 NPSQLSLTSNVGPAITAVFAITLLNEPFTFYHAIGMLFVVYSVI 305
>gi|313894035|ref|ZP_07827601.1| putative membrane protein [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441599|gb|EFR60025.1| putative membrane protein [Veillonella sp. oral taxon 158 str.
F0412]
Length = 300
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 97/301 (32%), Gaps = 11/301 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIV 72
+ ++G L +LWG++ QFL +++ +++ R L + +
Sbjct: 1 MSSMKRYEIIGVLLTLLGAVLWGVSGASVQFLSNFRDMNLEWLVTMR-LITAGLLTVLYA 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+F G S+ VG+++F +A+ + ++ + + ++ P + +
Sbjct: 60 WFKYGNSIFNVFRSLKDTVGLIIFGVFGMALCQYTYFKSIALAGAGIATVLQYLAPSMII 119
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AYCFAR 185
+R + +II+ +L ++ + + + G+ + S + V ++
Sbjct: 120 IYLLARYGKRPSKGEIISVILALVGTICLMGNDGLSIESFPLTVLVWGLLSAVGVAVYSL 179
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + G + + + L F
Sbjct: 180 SPVDLLYKYGTLPIVGFGMFISGIVAAILFHQPNSYAMWDVWTVIGCFNVVFLGTIVSFN 239
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ G+KR I+ P+ L + I +++ +++ L
Sbjct: 240 AYLEGVKRIGAVPGSILSSIEPISAAFFGWAFLDNQFSLLGLIGMAMIIATVIIIALEKR 299
Query: 306 I 306
Sbjct: 300 K 300
>gi|304409496|ref|ZP_07391116.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS183]
gi|307303854|ref|ZP_07583607.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
BA175]
gi|304352014|gb|EFM16412.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS183]
gi|306912752|gb|EFN43175.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
BA175]
Length = 283
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 111/292 (38%), Gaps = 10/292 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M L + A ++ L + LE V +++ +R L++ V + G L L
Sbjct: 1 MQPLLMILAAQLVIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + F+ A+L + + +P++ + L ++FL ER
Sbjct: 61 YYKVHLARALL-------IGLGNAIFMLAILHLPLATVTAVIYTSPLLLLVLSALFLHER 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +A ++ +L+++ + A A ++ + + +
Sbjct: 114 IGYRRSVAGIIGFTGILLISQP--TEFNLYIGLAFFGAMTSALNSLILKAYSTHEHPFSM 171
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L F +++ + ++P + GL + + + +RA S + +
Sbjct: 172 LFWSNAFAMIFLIPATLYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPV 231
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
EYT + + +IL + + V I G+V+ + ++ + K++
Sbjct: 232 EYTGLIFAALFGWWILDEELSLVMLIGIGLVIFSSILPSYSELKAKWKSRRS 283
>gi|296107496|ref|YP_003619197.1| Predicted permease, DMT superfamily [Legionella pneumophila 2300/99
Alcoy]
gi|295649398|gb|ADG25245.1| Predicted permease, DMT superfamily [Legionella pneumophila 2300/99
Alcoy]
Length = 300
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 84/297 (28%), Gaps = 10/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G+ + + L+G + +S ++ R L S + ++
Sbjct: 1 MNSQEQRGSFYAILSGFLYGFIGYFGISAIHGDLSASNMLFWRFLISSIFILIVLI---- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + YA L L+ +F PVI +
Sbjct: 57 -PQLKNINDTYKSMFTAFLSGVLYYGLSTLLYFYASLYIGSGLSMVIFFTYPVIIMVFNY 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSS 193
F + + + +A +I++ + ++ + I I + Y +
Sbjct: 116 FFYGQTIPKIYYLAISVILIGMALLIDVNEIAFDLWGIFLGLASAFFYACYIVSSKNNEI 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V ++ + + + +K
Sbjct: 176 SPNVSTLMVCLGCMTTSLLVACLDQTFKVPTSFPVWLNLFGIGLVATVIPILLMLHSLKY 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ P+ +++ V +L + + + +V+ ++ L IN +
Sbjct: 236 ISSEKASILSVLEPVFVVIFGVMLLGEELKPWHALGIVLVLAGALITLFSHRINLNQ 292
>gi|261414838|ref|YP_003248521.1| protein of unknown function DUF6 transmembrane [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261371294|gb|ACX74039.1| protein of unknown function DUF6 transmembrane [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327413|gb|ADL26614.1| transporter, EamA family [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 304
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 84/297 (28%), Gaps = 17/297 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLLKDT 84
+ A LWG T + V + R + +F F+ K
Sbjct: 8 FLMVLAAFLWGSTFVAQIEGNDVGPFAFVCMRNFIATGVLFGLAKVLDKFNKSPRKPKTK 67
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+N +F L L + +I V + S F ++++
Sbjct: 68 EENRALWIAGLFCGLTLFFAMNLQQTGLFLGCSAGKAGFLTACYIIFVPILSTFFGKKIS 127
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + + L ++ + + I + A FA + VG + + + A
Sbjct: 128 PKIWLCVAITLEGLYLLCIKEDFTIQPSDIILLLCALAFAAHILVVGKYGPYMDNVRLSA 187
Query: 205 IPALFYVVWNGFSGGEHF--------------FLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I L + F + P L L + F +
Sbjct: 188 IQFLVVATLSIFPMFFVDLKGSFAGFGTVIEVYSHFKPWIPLLYAAILSSGVAFTLQIVA 247
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + ++ + ++S +L + I ++ A+++ +
Sbjct: 248 QNKLRPTIASLLMSLESVFSVISGWVMLGERFTLQEAIGCVLMFTAVILAQVKIRRR 304
>gi|255655544|ref|ZP_05400953.1| hypothetical protein CdifQCD-2_07547 [Clostridium difficile
QCD-23m63]
gi|296451534|ref|ZP_06893269.1| DMT superfamily drug/metabolite transporter [Clostridium difficile
NAP08]
gi|296880117|ref|ZP_06904084.1| DMT superfamily drug/metabolite transporter [Clostridium difficile
NAP07]
gi|296259599|gb|EFH06459.1| DMT superfamily drug/metabolite transporter [Clostridium difficile
NAP08]
gi|296428842|gb|EFH14722.1| DMT superfamily drug/metabolite transporter [Clostridium difficile
NAP07]
Length = 314
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 104/307 (33%), Gaps = 15/307 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV 72
KE A L G + + I+WG + TQF ++ L++I+ R + +
Sbjct: 5 KKEGALLKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFF 64
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + L + + L+ +F VI
Sbjct: 65 -------KQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVP 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTI 188
F+G + + +L+ + II++L+ ++ + I++L + + I A+ +
Sbjct: 118 FIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSE 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L V+ F+G + + F +
Sbjct: 178 FAKDNNPMALTAIQFTVAFLMSVIVQAFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQT 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
KR + I+ T + + S+ ILK+ I I ++ + + T ++
Sbjct: 238 ICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLVIGSILIF--VAIITAETKLSF 295
Query: 309 GKNKTKK 315
K+K K
Sbjct: 296 LKSKKVK 302
>gi|224283405|ref|ZP_03646727.1| integral membrane protein with duf6 [Bifidobacterium bifidum NCIMB
41171]
Length = 330
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/317 (8%), Positives = 79/317 (24%), Gaps = 26/317 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
M G + ++WG + Q + +S L + R + +++
Sbjct: 3 MKQQEMAGMACLVLTSLIWGFAFVSQVQGMASMSPLFFNATRFTLGAISLIPLLLWKRLR 62
Query: 78 LSL--------------------LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG 117
+ + + + ++ + A +
Sbjct: 63 RCRESGKTVGAGNREAGDDEHDMIAGSALSNPLIVGMICGVFLFAASTLQQYGIMFGCSA 122
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-----LSL 172
F + V+ L + L+ + + +A + + ++ + G L
Sbjct: 123 GRAGFITALYIVMVPLLAYLVLRRAVRMMTWMAVGVAVAGFYLLCITDGFGSLTLADCLL 182
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
A + + A V G +
Sbjct: 183 LFTAVLFAAHILSIDTLGACVDALTLSFIQFVTTAALSWVGTLIEGSMDWNGAGQAWIAV 242
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
L + + + G + + ++ + ++ +L + + + +
Sbjct: 243 LYAGIGSVGVAYTLQAVGQQWVPPTRASLIMSLESVFSVIGGALLLGETMTVRGYLGCAL 302
Query: 293 VVIAMVVYLLPTVINSG 309
+ +V+ +P V
Sbjct: 303 IFAGIVLAQMPGVGRRR 319
>gi|256846686|ref|ZP_05552142.1| membrane protein [Fusobacterium sp. 3_1_36A2]
gi|256717906|gb|EEU31463.1| membrane protein [Fusobacterium sp. 3_1_36A2]
Length = 287
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 91/284 (32%), Gaps = 11/284 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+++ A LWG + + + + V++ R +++ + + F + K+T+
Sbjct: 1 MIYLLIASFLWGTSFIAGKIAYSMFDPSLVVALRYIFASIILLPVTISF---MHQEKETI 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + L + + P++ +G +F KE+++
Sbjct: 58 NKKDFFMLILLGILTYPLTSMLQFIGLSFTSASSAATIIGIEPIMITMIGFIFFKEKISP 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
+ ++ + + S + +S S +
Sbjct: 118 IVFFLGVVAFFGVALTVGVSALENVSFFGCFLVFLSTIVVSFWVQLSKKVLTKISSNYYT 177
Query: 205 ------IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + ++ G++R++ S
Sbjct: 178 ALTIQLGTLFALPIMLFLVKSWEIHYSLKGLIALLYLVVGCSIGAGWFWNKGLERSEASK 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
GI P+ I+ +V IL + ++ + I +V+++ + ++
Sbjct: 238 SGIFLALEPVFGILFAVLILGEKLNFLSIIGIILVILSAAICMI 281
>gi|221632315|ref|YP_002521536.1| putative integral membrane protein [Thermomicrobium roseum DSM
5159]
gi|221157117|gb|ACM06244.1| putative integral membrane protein [Thermomicrobium roseum DSM
5159]
Length = 309
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 79/285 (27%), Gaps = 7/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G V + + +G T+ V V +I+ R + V A+ L
Sbjct: 19 RIGAGAVVLSALGFGTLATLTKLAYGASVPVPTLIAWRFGIAALLVIMALPLEQWRRGQL 78
Query: 82 KDTLKNPKAVGMLVFSAT-ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +A + ++ AL + ++V P++ + L V +
Sbjct: 79 FGRQPWTDRRRLATAAAVACFVGNTILYLVALQRVSVATAAILFYVYPLVVLALRLVGWR 138
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----AIAVTWSAYCFARKTIPVGSSEGF 196
E Q+ A L + + + +A +
Sbjct: 139 EVPTRRQLAALLAGFSGVTLTLGWRWHTIDLTGSLLMLASASLYAAYIVFGHRGFRDASP 198
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + L L +F G R
Sbjct: 199 VLATACTFSATAVVALALLSVERAPLLIDRSALLPVLGIVVLATVLPVQLFLIGTLRLGP 258
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ I+ P+ + ++ +L + + V+ + +V+ A V
Sbjct: 259 TPAAILGTLEPVASVFVAMMVLSEQLTLVQLVGGLLVLTAAAVIS 303
>gi|121604908|ref|YP_982237.1| hypothetical protein Pnap_2007 [Polaromonas naphthalenivorans CJ2]
gi|120593877|gb|ABM37316.1| protein of unknown function DUF6, transmembrane [Polaromonas
naphthalenivorans CJ2]
Length = 291
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/294 (14%), Positives = 85/294 (28%), Gaps = 8/294 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + + ++W I + T+ LE EV R ++L + + +F G
Sbjct: 1 MKLTHSRAVVVMILVTLMWSIAGVVTRQLEAARSFEVTFWRSFFTLASLLVILPFFQG-- 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K A L S +V + F+ AL + + P I+ + VF
Sbjct: 59 --RAVFRKIRNAGKALWLSGVCWSVMFTAFMVALTLTTVANVLVTMALGPFITALMARVF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ R+ +A L + M G +L + A + +
Sbjct: 117 IGHRIPVRTWVAIALASAGIAWMYGGQMDLGGQLAGTLVALMVPLAGACNWTVVQHSGAH 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G I++ + F L + + +
Sbjct: 177 GQKIDLVPAVLMGAALSSLATLPLAFPFSATPHDIGLLAVLGLFQLAIPCVLAVLCAGVL 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K V ++ + I+ + + + +V+ A+VV L
Sbjct: 237 KAPEVALLALLEVIFGILLAWLGAGEVPGSSVLTGGSLVIGALVVNELIGWRQR 290
>gi|323703880|ref|ZP_08115514.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
gi|323531168|gb|EGB21073.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
Length = 300
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 12/291 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH--RVLWSLPGVFFAIVY 73
K ++G L V + I + + Q + + R L + ++
Sbjct: 6 KSQVKSRQLIGILLVIISTISLSTEAVAAKISYQGGATVITALTIRYLLATLLFGAILII 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ L A+ + + LA+ + + +V P I+
Sbjct: 66 TKTSIKLPLKQTLTVLALAIGGQATIALAL-----FNSFKYIPAAIAILLLYVYPTITSI 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP---- 189
L LKE L+ + +A +L + +I+ L L + + A +
Sbjct: 121 LSFFILKEPLHRRKWLALILTLTGCVIILGQPIENLQPLGVVLALLAALLNALFLVLSSK 180
Query: 190 -VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + A+ ++V G F L L+ +
Sbjct: 181 LLDQVSVPVFNTYITGTCAVVFLVLGYTMGELQFHLTAKSWAALLVLAVVTTVIAMGTLF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+ S I+ P + +L + + + + I++ +++
Sbjct: 241 KGVTIIGPSRAAIISTLEPAFTGLLGWLLLGETLTGWQVVGGIIILCGVLL 291
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 29/98 (29%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A L L + + K + ++
Sbjct: 52 YLLATLLFGAILIITKTSIKLPLKQTLTVLALAIGGQATIALALFNSFKYIPAAIAILLL 111
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y P + + S FILK+P+ + + + + V+ L
Sbjct: 112 YVYPTITSILSFFILKEPLHRRKWLALILTLTGCVIIL 149
>gi|293395130|ref|ZP_06639416.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291422307|gb|EFE95550.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 303
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 94/293 (32%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W I + ++ + + +R L +L + ++ +
Sbjct: 3 VLFPLLAVLIWSINAVVSKASASAIDPAAISFYRWLLALVTLTPFVL----PGVIRNWQT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ + ++ YA + + P+++V LG L+
Sbjct: 59 VRTHWWKLLILGLLGMVLYQSLAYYAAHSVSALFMGILNSLIPLLTVLLGVWLLRVAPTV 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I +LL + L+ + GI L + ++Y +
Sbjct: 119 GIAIGSLLSLGGLVWLVSSGQPGQLLQHGIGKGELMMFAASASYALYGVLTKRWAIAIPN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F + L L L + ++ G+ R +
Sbjct: 179 WQALYVQILFGVLLLLPNFLLAQDVALNGHNIPLVLFAGIPASIIAPYLWIQGVMRLGAN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T I AP+ + ++ L + + + I GI ++ +V+ K
Sbjct: 239 TASIFMNLAPVFTAIIAMLFLHEQLHSYHLIGGGITLLGVVLSQRLRTPLGRK 291
>gi|229142438|ref|ZP_04270944.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
BDRD-ST26]
gi|228641026|gb|EEK97351.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
BDRD-ST26]
Length = 310
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLL----FSFKQLKKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 64 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIVLGAAGVLLITIPSSNGNQEVSLIGDTLILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMIETFYYGFPEIETWKTGFSVMYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ I++S+ +L + + I +V+I +
Sbjct: 244 TVSASVSGLYLNALPLISILASIALLDESLTWKIVIGGSLVLIGV 288
Score = 40.7 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 48/143 (33%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICLLFSFKQLKKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S LK+
Sbjct: 61 VVHKQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + +++ +P+
Sbjct: 121 IQLNYWIGIVLGAAGVLLITIPS 143
>gi|242278691|ref|YP_002990820.1| hypothetical protein Desal_1218 [Desulfovibrio salexigens DSM 2638]
gi|242121585|gb|ACS79281.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
salexigens DSM 2638]
Length = 295
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 82/284 (28%), Gaps = 17/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A +LW + + + V VI R++ + F I F +
Sbjct: 11 VVALLTAVLLWSSSFVALKLAMAVYDPTFVIFGRMMLATLCFIFFIPSFKK------QPI 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ + +++ F A+ P++ L E L+
Sbjct: 65 RKGDFRWLIFMAFCEPCMYFVFESQAITYTSASQAGMICSTLPLLMAVSARFILNEDLSR 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
+ L + + ++L S + Y K + S
Sbjct: 125 RTLTGFALAVCGGIWLSLASESTEHAPNPVLGNFLEFLAMCCAVGYMTVLKKMTAHYSSL 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F L + + S + + + + ++++G+ +
Sbjct: 185 FLTAFQALMGAIFYLPLLALPSTNLPSVFDPLAAGSIVYLGIGVTIGGYGLYNFGMSKLP 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ + IL + T++ +V+ +++
Sbjct: 245 ANQTTAYINLIPVCTLFFGWLILDETFTTMQFAAAALVMGGVIL 288
Score = 36.8 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 2/130 (1%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
AV + F + + + F+ + + L ++ + + G+ +F
Sbjct: 17 AVLLWSSSFVALKLAMAVYDPTFVIFGRMMLATLCFIFFIPSFKKQPIRKGDFRWLIF-- 74
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
F S I S G++ T PLLM VS+ FIL + + F + V
Sbjct: 75 MAFCEPCMYFVFESQAITYTSASQAGMICSTLPLLMAVSARFILNEDLSRRTLTGFALAV 134
Query: 295 IAMVVYLLPT 304
+ L +
Sbjct: 135 CGGIWLSLAS 144
>gi|212704378|ref|ZP_03312506.1| hypothetical protein DESPIG_02433 [Desulfovibrio piger ATCC 29098]
gi|212672203|gb|EEB32686.1| hypothetical protein DESPIG_02433 [Desulfovibrio piger ATCC 29098]
Length = 297
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 95/302 (31%), Gaps = 19/302 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
PT+ ++WG T T+ L+ + +E++ R L
Sbjct: 2 NPTLAAHAAAILTILIWGATFTSTKVLLQAFAPIEILFLRFL-------LGACALLLACP 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + V + + +++ AL ++P ++ L + L
Sbjct: 55 RLLHVRDRRREVTFALAGLCGVTLYFLLENIALSYSTASNVGVLVGISPFLTALLARIVL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP---------- 189
E L+ + + + ++ + ++S L + +
Sbjct: 115 GESLHPGFFVGFVCAMSGIICIAVNSNAVLQLNPLGDVLALLAALTWAFYSILTRKIGDY 174
Query: 190 -VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + C I L + +GF G L ++ F ++
Sbjct: 175 GYNTLQVTRRIFCWGLIFMLPTLPLSGFRWGLERLAQPEMLANLLFLGLGASALCFATWN 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I+ + Y P++ ++++ +L + + + ++++ +V+ ++
Sbjct: 235 FTIRILGAIKTSVYIYAVPVVSVITATLLLGERLTGLALTGMALIILGLVISEGRLPLHR 294
Query: 309 GK 310
K
Sbjct: 295 KK 296
>gi|71280633|ref|YP_266862.1| membrane protein [Colwellia psychrerythraea 34H]
gi|71146373|gb|AAZ26846.1| membrane protein [Colwellia psychrerythraea 34H]
Length = 322
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/311 (10%), Positives = 84/311 (27%), Gaps = 18/311 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ + +WG+ + +E + + R + + + +
Sbjct: 4 TSPRIATILLLIVCFIWGVEFVPIDLAIEVMPTNTFNAIRFAVATLSMLPLLWFVQKKNK 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L + + + F + + LG +
Sbjct: 64 GNSKPIDYVLLIRSGMLLGFFLFIGFYTQTEGMRFTTVTNAGFITGLCVPLVPVLGFLIF 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS------- 192
+ + I + L ++T+ + I V A+ FA I
Sbjct: 124 RNVVPKSVWIGVVTATAGLYMLTIGDKLVFNKGDILVLICAFGFAGHIIMTDRFVDNLPI 183
Query: 193 ----------SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + +FY + L+ L ++
Sbjct: 184 IPLSIVQIFAVSIYSTIAIFIGPDPVFYYQDAEPVSWYQQLFTPLMIFAILVSGILGTAY 243
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F S K V ++ P+ +++ L + + I G+++ M+V L
Sbjct: 244 AFWAQSVSQTLLKPHKVALIFAAEPVFACIAAWVFLDEVLGEKGMIGAGLILAGMLVSEL 303
Query: 303 PTVINSGKNKT 313
+ +
Sbjct: 304 GDRKKQPELRA 314
>gi|254526213|ref|ZP_05138265.1| integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9202]
gi|221537637|gb|EEE40090.1| integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9202]
Length = 296
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 102/286 (35%), Gaps = 15/286 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + L +++++ + + E++ R L SL F I LK+
Sbjct: 19 LVFASFFFSLMTLCVKYIDKRIPIYELVLFRSLLSLIITLFII--------KLKNINPWG 70
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K +L + + YA+ +++ + P+ +F+ E++ I
Sbjct: 71 KNRPLLFLRGVLGTLALFCIFYAIRNMPLSISTVIQYTYPIFISIFAGIFINEKITRNII 130
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ ++ + +LI+ + + +++ + A C A I V +
Sbjct: 131 FSLIIGWIGILIILNPTQLSNINVELENNSISIAFLGAICTALAYITVKKLSFTEDVYVI 190
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L + ++ N+ + +++IG GL + G+K S +
Sbjct: 191 IEYFPLVSFITLFPIVLINWVTPNLNELVWIIGIGLFTQLGQTFLTIGLKNLPASEASTI 250
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y L + + + I+ + +V++ ++ V +
Sbjct: 251 NYLQVLFGSIWGILFFSEIINLKFLVGASLVLLGTIISTTKIVKRA 296
>gi|209550666|ref|YP_002282583.1| hypothetical protein Rleg2_3090 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536422|gb|ACI56357.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 305
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/285 (9%), Positives = 81/285 (28%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A + WG + + + +S + + R ++ + V +
Sbjct: 6 YLCLVIATLCWGGNSVAGKLAVGHISPMMLTFLRWFIAVALIALISV----PQLKRDWPV 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + A+ + P++ L +F + ++
Sbjct: 62 VRKNLPLLFFYGVIGYTLFNAMLYSAVQYTTAINVAIEQAGIPMLIFLLNFMFFRTGISL 121
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + + ++ + + H L L +S Y + P
Sbjct: 122 AQCLGFGMTLIGVALTAAHGDLATLLQLSLNRGDGLMLIAIAAYSVYTIFLRWKPPVDWR 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ ++ G + + + ++ G++
Sbjct: 182 TLMAFPALGAMLTSVPLLLWEAGRGAALWPDQAGWVITFYTATFPSLLAQILYIKGVEAI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ P+ + SV ++ + + + I + + + +
Sbjct: 242 GANRAGLFINLVPVFGTLLSVALIGERLQSFHMIALALTLGGIAI 286
>gi|153837580|ref|ZP_01990247.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ3810]
gi|149749077|gb|EDM59888.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ3810]
Length = 292
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/296 (8%), Positives = 88/296 (29%), Gaps = 12/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ + ++ + ++++ ++ + I R + + +
Sbjct: 3 NSERKATVILVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLC-------N 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + ++ +F ++ + + V
Sbjct: 56 RPLKAARLKDVLAASGVGLLLGGAVMTWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMF 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++R + I+ + ++ L ++L G L A A F +
Sbjct: 116 QQRPQRIFWISLPIAVIGLACLSLAGGWKQSASQLWFLGAALILALHFNVNSKYSQKLPV 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + + + F + L S + + + G K +
Sbjct: 176 LLLTCVQLFSAGCLGLLVSFLMESRPEQVDSSIWWWFALSTLLATSLRYVMQTMGQKFVQ 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ +V S+ + + + + +++ ++V+Y K
Sbjct: 236 AGNAALIMILEPVWTVVLSILWYGEVLTANKLVGCLLILFSLVIYRTGGRFRFPKR 291
>gi|56697326|ref|YP_167692.1| hypothetical protein SPO2475 [Ruegeria pomeroyi DSS-3]
gi|56679063|gb|AAV95729.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 311
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 85/295 (28%), Gaps = 10/295 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A + + G L V A + I ++ + L V + +++ ++ V
Sbjct: 16 APMNNVNGILLVVAAMAAFSIEDMFIKKLSVTVPIGQILLVLGVFCSAAFLTMAVATRK- 74
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L+ A AV F AL + + P++ ++
Sbjct: 75 -----RVFSRAAWSPLLLIRAATEAVSALTFATALSLVDLSTVAAVFQAMPLVVTMGAAL 129
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---AVTWSAYCFARKTIPVGSSE 194
FL E++ + A + + +L++ + A S T + +
Sbjct: 130 FLGEQVGWRRWSAITVGFVGVLMIIRPGMAGFQPAQLLVVASVISVAARDLITRRIDAHV 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + G G L + ++
Sbjct: 190 ASAVVSFQAYLALILGGAGILLVSGTALVPVEPGHWGPYAGAILFGVLGYYGIVTAMRVG 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ S V YT L +++ V + + D +++ + + L +
Sbjct: 250 EASVVTPFRYTRLLFSLLAGVLVFGERPDWPTLAGGALIIGSGLYTFLRERRLAR 304
>gi|86143715|ref|ZP_01062091.1| hypothetical protein MED217_00440 [Leeuwenhoekiella blandensis
MED217]
gi|85829758|gb|EAQ48220.1| hypothetical protein MED217_00440 [Leeuwenhoekiella blandensis
MED217]
Length = 313
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/296 (15%), Positives = 102/296 (34%), Gaps = 20/296 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++ A ++GI + + + I RVL + + ++
Sbjct: 18 ANKRVLALAAATGASTIYGINHTLAKGVMPTYIGAYGFILLRVLGASLLFWLLSIFTKSE 77
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
D + L + + V+ F L +S ++PVI + L ++
Sbjct: 78 KIDRADYWR------FLGCAVFGMFVNMLSFFKGLSLSTPINSSVIITLSPVILLILSAL 131
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFAR 185
FLKER+ ++I+ L+ +L L++ L G L + A +
Sbjct: 132 FLKERIGFIKILGILIGMLGALVLVLFGAAEQPNAPNIPLGNVLFFVNGATYAVYLILVK 191
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
S+ + +L + + F+ + L + + +
Sbjct: 192 PISNKYSTITLMKWLFLLGVFLNLPFTFTEFTSVDWLHLPPHAVWVMVFVVVGTTFSTYL 251
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ Y +K K ST+G Y P++ I+ +V + + VR ++ + + +
Sbjct: 252 LNLYALKTLKASTIGAFIYLQPVIAILFAVLVGADHLSWVRAGAAALIFLGVYLST 307
Score = 37.2 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 37/108 (34%)
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+L + + W + + FL F G+ +
Sbjct: 52 AYGFILLRVLGASLLFWLLSIFTKSEKIDRADYWRFLGCAVFGMFVNMLSFFKGLSLSTP 111
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ +P+++++ S LK+ I ++ + I ++ +V +L
Sbjct: 112 INSSVIITLSPVILLILSALFLKERIGFIKILGILIGMLGALVLVLFG 159
>gi|237741000|ref|ZP_04571481.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|229431044|gb|EEO41256.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
Length = 287
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 92/284 (32%), Gaps = 11/284 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+++ A LWG + + + + V++ R +++ + + F + K+T+
Sbjct: 1 MIYLLIASFLWGTSFIAGKIAYSMFDPSLVVALRYIFASIILLPITISF---MHQEKETI 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + L + + P++ +G +F KE+++
Sbjct: 58 NKKDFFMLILLGILTYPLTSMLQFIGLSFTSASSATTIIGIEPIMITMIGFIFFKEKISP 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA- 204
+ ++ + + S + +S S +
Sbjct: 118 IVFFLGVVAFFGVALTVGVSALENVSFFGCFLVFLSTIVVSFWVQLSKKVLTKISSNYYT 177
Query: 205 ------IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + L + ++ G++R++ S
Sbjct: 178 ALTIQLGILFALPIMLFLVKSWEIYYSLKGLIALLYLVVGCSIGAGWFWNKGLERSEASK 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
GI P+ I+ +V IL + ++ + I +V+++ + ++
Sbjct: 238 SGIFLALEPVFGILFAVLILGEKLNFLSIIGIVLVILSAAICMI 281
>gi|218290338|ref|ZP_03494474.1| protein of unknown function DUF6 transmembrane [Alicyclobacillus
acidocaldarius LAA1]
gi|218239574|gb|EED06767.1| protein of unknown function DUF6 transmembrane [Alicyclobacillus
acidocaldarius LAA1]
Length = 311
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/304 (10%), Positives = 88/304 (28%), Gaps = 15/304 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ +G + + A LWG T + ++ + V +I R + + + +
Sbjct: 4 SWVGAVCLALAASLWGGTYVVSKAVMDWVDPSALIWLRYALGVVALAVVGLVRRVKWRIA 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
V + A+ + + TP V + L E
Sbjct: 64 A-----RHLVTVAAIGLVGYALSIWAQFVGTQWSTAQMGAVITSGTPAFMVIFARLLLGE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK---------TIPVGS 192
+ + + +L L +++M +A S
Sbjct: 119 AITWRRAASVMLATLGVIVMIGVGHQANSRVAWGGLILLVAAVTWGLQSVLVKRVPSEYS 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S ++A+ + + W L L + F +++ G++
Sbjct: 179 SIVVTAYAMLVALAVMTPLGWPHMPSLRTILGHTWVWMGSLYLGVLSTAGAFLLWNEGLR 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R + + + PL+ +L + + + +++ + + + ++ +
Sbjct: 239 RMPAGSGAVYFFLQPLVGTALGWLVLGETVSASFWLGALLILGGVALVVREPGPSATSRR 298
Query: 313 TKKS 316
+S
Sbjct: 299 WARS 302
>gi|300855123|ref|YP_003780107.1| hypothetical protein CLJU_c19430 [Clostridium ljungdahlii DSM
13528]
gi|300435238|gb|ADK15005.1| putative membrane protein [Clostridium ljungdahlii DSM 13528]
Length = 297
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/294 (15%), Positives = 100/294 (34%), Gaps = 13/294 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + A +++G L+ + + +S + R + +F A S
Sbjct: 5 GKIKLIVAMLIFGSVGLFVKNI-DLSSSMIALVRGIIGSIFLFTASYITRQNTSWKAIKS 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ S + V+W F A + Y+ PVI +FL LKE+LN
Sbjct: 64 NLIPLII----SGAAIGVNWIFLFQAYKYTTVSKATLCYYFAPVIVMFLSPFILKEKLNT 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA-------RKTIPVGSSEGFFI 198
++I+ ++ + + ++ + + A + + G
Sbjct: 120 VKIMCIIVAMAGMFLIVGAGSSAAENNQLLGIIYGLAAAALYASVIIINKFIKNLSGMES 179
Query: 199 EMCVLAIPALFYVVWNGFS-GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M L A+ + + + LG L L + + ++ I + K
Sbjct: 180 GMIQLTAAAVVLLPYVFVTEKVSLSQLGFKSIVLLLAVGIIHTGIAYLLYFSAILKLKGQ 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T+ I Y P+ IV S L + + ++ + +++ + L + K
Sbjct: 240 TIAIFSYIDPISAIVMSSIFLGERMTFIQVLGGILILGTTFINELWGKKSDAKE 293
>gi|257452773|ref|ZP_05618072.1| hypothetical protein F3_06885 [Fusobacterium sp. 3_1_5R]
gi|317059314|ref|ZP_07923799.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313684990|gb|EFS21825.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 297
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 87/298 (29%), Gaps = 18/298 (6%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F +WG T+ S +++ R L + +F + Y +
Sbjct: 8 ILLFMTAAIWGGGFPITKIALNYGTSPNAILAVRFLAASVILFAYLCYKKEKI------- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
V + +F+ L++ + F L +F V++ F +F ++
Sbjct: 61 -TRSEVKLGLFTGVFLSLGFSFQTVGLSYTTASKNAFLTGTYVVLTPFFAWLFTRKMPKK 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLS--------LAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L +L + +++ + A+ + K F
Sbjct: 120 QIYFSCFLSLLGIFLLSWSGENVSMQFGDVLSLLCAVFYAIQISYMSAKIGEKNPLHVNF 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+M I L Y + F + + + K + S
Sbjct: 180 FQMLSAGILTLIYNIILKGGSVSSFPENKVQLFSVGFLVVFNTLLAYSAQTLAQKYVESS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
V ++ T L S L + + + ++ +++ + S K K
Sbjct: 240 LVCLILSTEILFGAFISFLFLGEILSFQSLLGGFLMFLSIFLAEFDWKKKSDKESITK 297
>gi|254713755|ref|ZP_05175566.1| hypothetical protein BcetM6_10450 [Brucella ceti M644/93/1]
gi|254717187|ref|ZP_05178998.1| hypothetical protein BcetM_12351 [Brucella ceti M13/05/1]
Length = 338
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/294 (15%), Positives = 97/294 (32%), Gaps = 14/294 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 34 EMNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWR 88
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 89 GQLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLLLPEAIAINYASPLITVILGAAIL 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 149 HEVVRFYRWSAVLIGLFGVMIIIWPRLTLFSAGSVGRDEAVGALAALGAAVMSAVAMMLV 208
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ ++ V S + + N L+G G + +
Sbjct: 209 RRLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTEC 268
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 269 YRHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGSIIYRE 322
>gi|153808578|ref|ZP_01961246.1| hypothetical protein BACCAC_02875 [Bacteroides caccae ATCC 43185]
gi|149128900|gb|EDM20117.1| hypothetical protein BACCAC_02875 [Bacteroides caccae ATCC 43185]
Length = 292
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 89/292 (30%), Gaps = 5/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+S+R + +
Sbjct: 1 MNRIKGILYAAVSSSTFGLAPFFSITLLLAGFSAFEVLSYRWGVASIVLIVFGWLSGCNF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + +L + + I + + ++ F
Sbjct: 61 RLAGKDWGVVFLLSLLRAVTSFSLIIAYQNIASGVASTIHFMYPLAVALAMMFFFREKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEG 195
L L L + ++ + + +A +++ Y +T
Sbjct: 121 LLVILAVLMSLLGAALLSLGELEAKSGNTMVGLVAACVSVFSYAGYIVGVRTTRAVQINS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V+ + +FY++ + G + L + IK A
Sbjct: 181 TALTCYVMGLGTIFYLIGAYCTSGLQLVSDGYTWLIILGLALPATAISNITLVQAIKYAG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ I+ PL +V VF+ K+ + ++++A+ + + +
Sbjct: 241 PTLTSILGAMEPLTAVVIGVFVFKELFTVNSAVGIILILLAVSIVVFRRQKS 292
>gi|13507181|gb|AAK28494.1|AF315580_1 hypothetical protein [Agrobacterium tumefaciens]
Length = 335
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 89/293 (30%), Gaps = 17/293 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + WG++ + +E L + R S +F ++
Sbjct: 26 ALLCGMVVFWGLSWPVMKLSVEHAPPLWLAVLRFSTSSICLFVFGLFRRDIR-----FPT 80
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + +A + A+ S + TP+ SV + + +ER +
Sbjct: 81 NRDLPIIASIGLLQMAAFTALGMVAMTFIDAGKASLLAYSTPLWSVLIAYLMFRERPTRV 140
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS-----------LAIAVTWSAYCFARKTIPVGSSEG 195
Q++A + + + +M+ I + +A R+ +
Sbjct: 141 QLVAVAVGVGGIAVMSSPLSIDWSNAGSPIGAGLLVIAAICWSVVILHVRRHTWSATPLQ 200
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
LA L + W L L + SF F + + +R
Sbjct: 201 LAPWEMALASIILVPIAWAIDGPPTTIDWTPELVLLILYFGPVATSFCFVVSAEVGRRIS 260
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + P++ +S+ + + V F ++V + + + +
Sbjct: 261 VFAMSNLTLGVPIIGTAASIAFFGERLSLVSLSGFVLIVSGIAIAVCAVRRKA 313
>gi|42523878|ref|NP_969258.1| transmembrane protein [Bdellovibrio bacteriovorus HD100]
gi|39576085|emb|CAE80251.1| transmembrane protein [Bdellovibrio bacteriovorus HD100]
Length = 311
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/272 (12%), Positives = 78/272 (28%), Gaps = 2/272 (0%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGV-FFAIVYFSGGLSLLKDTLKN 87
+ A +LWG + T + LE S +E + R + + ++ + L++ +
Sbjct: 22 LIFAGVLWGFGFVATVWALEAFSPVETLFFRFVIASVVGEILYLILKGPNFTSLREEIFR 81
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
G+L+ +L + A + +F K
Sbjct: 82 ALPAGLLLGGMLLLQTIGLKYTTATKSGFLTSLYVILVPLFNAWLFKSPSSWKNYALTAL 141
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A ++++ + +++G + K + F
Sbjct: 142 ALAGTFVLVNANLSGINTGDLWTLGCSVFAAFHIIYIGKISNKVGNAFRFNNFQSAWCLL 201
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + L P L + F + K ST ++
Sbjct: 202 ALTPLLLTQERSDWNLLSYKPLLGILCLGLGSSIIAFYLQIRTQKVLSDSTASMLFLLES 261
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ IL + + + I++IA V+
Sbjct: 262 PFAALFGFLILSERLSWFQASGAVIIMIASVL 293
>gi|310829272|ref|YP_003961629.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
gi|308741006|gb|ADO38666.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
Length = 313
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/296 (10%), Positives = 98/296 (33%), Gaps = 15/296 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G + + I++G++ + ++ + +++ + ++
Sbjct: 1 MKSKRNLGFIAMAVVIIIYGVSYIARDVIVKYMHPTVIVAFQFTIMTVLFTLYNLFKKMD 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + K + +++ F + ++ ++S + V S+ + V
Sbjct: 61 MRIEK-----KDILMVILSGLVGCTFFHVFTVMSVKYIGATVSSLLFGFAAVFSLMIDFV 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARKTI 188
F K + L I+A ++ ++ + I+ + + L ++W YCF +
Sbjct: 116 FFKRKKTKLSILAVVVSLVGVYILMGINPSDLAETNFMGYAICLLSIISWVVYCFLADKV 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + +I ++F + +
Sbjct: 176 SDKYEKTVVLNYQAVVGAVTTLPFLFLYPVALGDLVNPEVLINLVILGVFNSTFAYFLNI 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
Y IK ++ + P++ I+ V + + I I++ ++++
Sbjct: 236 YAIKNIGVTFSNLFMNFLPIVTIIVGVVLYGTMPTLNQIIGGVIIIASVLILNKDQ 291
>gi|300724025|ref|YP_003713340.1| hypothetical protein XNC1_3170 [Xenorhabdus nematophila ATCC 19061]
gi|297630557|emb|CBJ91222.1| putative membrane protein [Xenorhabdus nematophila ATCC 19061]
Length = 304
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/302 (11%), Positives = 98/302 (32%), Gaps = 13/302 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M LF A ++W I + + + ++ +R + + ++ L
Sbjct: 1 MKNLLFPLIAVLIWSINAVVCKAATTVIEPASIVFYRWFIAFLTLTPFVLLPILKQRKLV 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + S + ++ YA T L + P+++V L L+
Sbjct: 61 A----KYWWKLFILSLLGMVLNQSLAYYAAHTVSATLIGIFTSLIPLLTVILSIFSLRAT 116
Query: 143 LNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ +L + L+ + G+ + + + + ++Y +
Sbjct: 117 PTVGITLGTVLSLFGLVWLVSKGEPASLLQHGLGIGEIMMFIAAASYALYGVLTKRWAIP 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + I ++ F ++ L + +L L + ++ + R
Sbjct: 177 LPNWQSLYVQIAFGALLLLPNFMMTDNVQLTSDNISLVLFAGIPASIIAPYLWIQSVIRI 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ I AP+ + ++ +L + + + I GIV+ +++ + +
Sbjct: 237 GANMTAIFMNLAPVFTAIIAILVLHEQMHSYHIIGGGIVLAGVIIAQQLRTPLTRRKPKY 296
Query: 315 KS 316
S
Sbjct: 297 NS 298
>gi|222082623|ref|YP_002541988.1| transporter [Agrobacterium radiobacter K84]
gi|221727302|gb|ACM30391.1| transporter [Agrobacterium radiobacter K84]
Length = 312
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 88/288 (30%), Gaps = 13/288 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + ++WG + T+ +S E+ +R + ++ + + + T
Sbjct: 3 YILLLITALIWGGNAIVTKASAGVISPAEIAFYRWVLAILILTPFVARQVWMNRAVLATH 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L+ A + + A + P++S+ L + L R+ +
Sbjct: 63 GWRLLILGLLGGAALPYLS----YIAARYTSAMHLGIIQSLMPLLSLVLAIILLGHRMTY 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ +L + ++ H G + + Y + +
Sbjct: 119 GALAGGIVSLLGVAVVASHGQLATLFTQGPNIGDAIMLAATVCYALYTVLLKRWPNGLPL 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L A + + + L + ++ GI +
Sbjct: 179 LQSLYLQACAAAISLLPIYLLSPRLGISTASLPLIAYAGAAASVAAPLLWMRGIDHIGPA 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ P++ + ++ +L + + + + + +++ L
Sbjct: 239 RASLFFNFVPVVTAILAIPLLSEQLTASLVLGGALTMSGVILAELWRR 286
>gi|229068268|ref|ZP_04201571.1| Transporter, drug/metabolite exporter [Bacillus cereus F65185]
gi|228714729|gb|EEL66601.1| Transporter, drug/metabolite exporter [Bacillus cereus F65185]
Length = 308
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 99/294 (33%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAEIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITVYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 183 ECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIVSGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLNEAFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|21229301|ref|NP_635223.1| transporter [Methanosarcina mazei Go1]
gi|20907881|gb|AAM32895.1| Transporter [Methanosarcina mazei Go1]
Length = 311
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 89/286 (31%), Gaps = 14/286 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L V IL+G+T L+ + + + +I +R+ + L +F ++ L K
Sbjct: 10 LAVLLGCILYGMTGLFLAGINNLPITSIIFYRLFFGLAFIFTFLLATGRLGELKPGKRKF 69
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ I+ V+ F+ + + + P+ + LKE++
Sbjct: 70 RLLLQ-----GVIVTVNMFFYFLCVRETCFSVAILLEYTAPIYVMLASPFVLKEKVGKES 124
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV----- 202
I A L I + ++ G S + + + + +
Sbjct: 125 IAALFLAIAGVYLVIRPEGGFGASDFSGSQLTGIASGLFAGILLAVIIMNVRVLKRDHSE 184
Query: 203 ----LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
A+ ++ F+ F + + + + + G + T
Sbjct: 185 FAIAFWGTAVSCILMLPFASETSFSVLAPNLSTLAAFGIVSVGIGGVLTTIGYANLESQT 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ P+ + + L + T +V++A ++
Sbjct: 245 GSLLALIEPVAGVFFDLVFLGVALSTGTLAGCVLVLVAAILVSFNG 290
>gi|163939618|ref|YP_001644502.1| hypothetical protein BcerKBAB4_1633 [Bacillus weihenstephanensis
KBAB4]
gi|229132639|ref|ZP_04261487.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST196]
gi|163861815|gb|ABY42874.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
gi|228650871|gb|EEL06858.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST196]
Length = 321
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 96/300 (32%), Gaps = 17/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 1 MDSNRLKGIIMVVIGACLWGLSGTAAQQLFQYENVSTEWLVTIRLLISGAILLIMSSFGA 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + A +++F + + ++ + + ++ P+
Sbjct: 61 NKKEIFGIWKQKSDANKIILFGLLGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYL 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKT 187
R + + I+ L ++ ++ + + ++ ++ A+
Sbjct: 121 LFKWSVRPSKIDYISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGVLSGLSLAFYSLYSK 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ I + I + + + S E L + + +F
Sbjct: 181 ELLEKWSSSVIVGWGMIIGGIGVTILHFISTNEFILLSTMKYVKLSTLPLITFVVIFGTL 240
Query: 248 SY------GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 241 IAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILS 300
>gi|307706806|ref|ZP_07643611.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307617891|gb|EFN97053.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 298
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 101/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISSLVLTNLRLLIAGGILMVLAYATAKDR 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 MLAFLKDR-KSLLSLLIFALIGLFLNQFAYLTAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
K +II+ +L I ++ H + LS+ A + + I +
Sbjct: 121 DKVAPTLGEIISIILAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPISLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQTVIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + + +++IA+ + L ++
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFLGMAMILIAVTLISLKDLLLEK 298
>gi|303256734|ref|ZP_07342748.1| putative integral membrane protein DUF6 [Burkholderiales bacterium
1_1_47]
gi|302860225|gb|EFL83302.1| putative integral membrane protein DUF6 [Burkholderiales bacterium
1_1_47]
Length = 355
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 87/299 (29%), Gaps = 7/299 (2%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFF 69
+ E +G + + WG + Q+L ++ + IS ++ + +F
Sbjct: 51 TTTSEANMNIRTLGVICGVLSGFFWGTMDIAAQYLLHTVRMAPAQFISLTMVVTTVALFG 110
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ + L K L +L + + + +
Sbjct: 111 ISLATRPKETFLAAADKQNVFQFFLFGVLVLLTQVSFYVCVKYSNAETAAVIAATRPFCI 170
Query: 130 ISVFL----GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
+ + L + L +I L++ TL G L + + +
Sbjct: 171 MGLLLFAAVMPTASQIFCCALALIGVCLMMTKGNFSTLSFGWLTLLVGFVAPLFSAAYTI 230
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
++ + G I M + + L + + +
Sbjct: 231 QSRTIVRKVGPLIAMTWAMLFTTILCNLYYPFWKVSLEWSFLTILSVLWVAIMGHIVAYT 290
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ + + G++E PL IV S F Q ++ +V+IA+V+
Sbjct: 291 LYIVSASKILPTITGVLETVEPLTAIVLSYFFFSQKMNGFMLAGAAMVLIAVVLLGFSR 349
>gi|210632312|ref|ZP_03297279.1| hypothetical protein COLSTE_01173 [Collinsella stercoris DSM 13279]
gi|210159628|gb|EEA90599.1| hypothetical protein COLSTE_01173 [Collinsella stercoris DSM 13279]
Length = 397
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/278 (10%), Positives = 81/278 (29%), Gaps = 13/278 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++WG + L + L+ V ++S R L S +F
Sbjct: 112 IMLVAMALIWGYSFLTMKTVLDTVPTFMLLSCRFLLSAVIMFVI-------FHKRIKAHF 164
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + +G V ++ + L+ +F ++ F+ + +ER+
Sbjct: 165 NREYLGFGVLMGCVIWSAYAAQTLGLVDTTPGKNAFLTGTYCILVPFIALLLFRERVTKW 224
Query: 147 QIIAALLIILSLLI-----MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I +AL+ ++ + ++ G L + M
Sbjct: 225 HIASALMCLVGVGFVALDNFSIQMGDLLTLVGAMFFAMDMAVVGHIGRTRDVSVLTSWMF 284
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + + + + +T +
Sbjct: 285 LFVGLFSLAATCAFEPRVPAEQWTPEIIGQLVFLAVVCTTIGLLLQNQALSHVPPATGSL 344
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ SV + + + F ++ +++V+
Sbjct: 345 LLSLESPSGVLFSVLMAGEVLTGKLIFGFALIFLSIVL 382
Score = 37.2 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 13/138 (9%), Positives = 36/138 (26%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
PL + V + + M + L V+ N
Sbjct: 107 PLFWKIMLVAMALIWGYSFLTMKTVLDTVPTFMLLSCRFLLSAVIMFVIFHKRIKAHFNR 166
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
F + G + + + G+ + T +L+ ++ + ++ +
Sbjct: 167 EYLGFGVLMGCVIWSAYAAQTLGLVDTTPGKNAFLTGTYCILVPFIALLLFRERVTKWHI 226
Query: 288 IVFGIVVIAMVVYLLPTV 305
+ ++ + L
Sbjct: 227 ASALMCLVGVGFVALDNF 244
>gi|209548535|ref|YP_002280452.1| hypothetical protein Rleg2_0932 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534291|gb|ACI54226.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 312
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 100/305 (32%), Gaps = 15/305 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M G + +++ + + + +V R ++L + + Y +
Sbjct: 6 KNPMRGIALKVSSVVVFLAMQTFIKLAGSDIPPGQVTFCRSFFALFPIIAYLAYIGQLRA 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ TI + F Y LL + P+++V +VFL
Sbjct: 66 AFYTA-----NPVGHLKRGTIGIMSMAFGFYGLLHLPLPEAIALGYALPLVAVIFAAVFL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
E + + A L+ I+ + I++ +AV SA I V
Sbjct: 121 GETVRIYRWSAVLVGIVGVAIVSWPKLTLFRDGGMEAEQAVGALAVLISAVLGGMAMIQV 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ +L V++ S + + P L+LI G + +
Sbjct: 181 RRLVEEEKTATIVLYFSLTASVFSLASLPFGWLVLPWPSALYLIAAGFCGGVAQILLTES 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A +ST+ EYT+ LL + + F+ I IVV A + + +
Sbjct: 241 YRHADVSTIAPFEYTSILLGGIVAYFVFGDVPSVSMLIGTLIVVSAGIFIIYREHQLGIE 300
Query: 311 NKTKK 315
+ +
Sbjct: 301 QREAR 305
>gi|119945500|ref|YP_943180.1| hypothetical protein Ping_1804 [Psychromonas ingrahamii 37]
gi|119864104|gb|ABM03581.1| hypothetical transmembrane protein DUF6 [Psychromonas ingrahamii
37]
Length = 296
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 93/281 (33%), Gaps = 15/281 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A LWG + + ++ +E VI R+L +L F + + +
Sbjct: 5 LCLIIATFLWGSSFVALKYAIEFYDPTFVIFLRMLITLITCTFFWRWIKRF------SYR 58
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ S +++ F AL P++ L L+E+L+
Sbjct: 59 KGDWKFLISMSLAEPCLYFLFEGIALQNTSASQAGVLVSCLPILIAILAFYILREQLSKA 118
Query: 147 QIIAALLIILSLLIMTLHSGIPLL--------SLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ L I +++T+ S + A ++ + F
Sbjct: 119 ILAGFTLCISGSILLTIMSPSSAHASNPLLGNFVEFLAMICAAYYSVSIKYLSGRYSPFA 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + + + L ++ + +++Y + R + T
Sbjct: 179 LIALQGLSGTLFFAPFLLFNDLPVTHNSNALLNILYLGTVVTFGAYGLYNYALTRVSVLT 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ ++ S IL + +++ + + IV + +++
Sbjct: 239 AASFSNLIPIFSLMLSAIILGERLNSAQWLSIAIVFLGIII 279
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 10/103 (9%), Positives = 32/103 (31%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + + + F + F ++ S
Sbjct: 33 VIFLRMLITLITCTFFWRWIKRFSYRKGDWKFLISMSLAEPCLYFLFEGIALQNTSASQA 92
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G++ P+L+ + + +IL++ + F + + ++ +
Sbjct: 93 GVLVSCLPILIAILAFYILREQLSKAILAGFTLCISGSILLTI 135
>gi|13474303|ref|NP_105871.1| hypothetical protein mlr5160 [Mesorhizobium loti MAFF303099]
gi|14025055|dbj|BAB51657.1| mlr5160 [Mesorhizobium loti MAFF303099]
Length = 313
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 90/291 (30%), Gaps = 9/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
L + Y+ + +++L VS L V R + V + + L
Sbjct: 17 ILCMLTTYVFFTFLDTSSKYLVLAGVSALIVAWVRFAVHVVLVGTLLRGWRDPLRF---- 72
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
P + V L I AL + Q T+ YF P++ L L E
Sbjct: 73 --RPVNLPAHVLRGVFLFGSTMCNILALRSLQLAETTSIYFFGPMVITALAGPLLGEWAG 130
Query: 145 HLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +A L +LI+T G+ + A+ + S E +L
Sbjct: 131 WRRWLAILAAFAGVLIITRPGVGVFGIGHLFALGSMLSNCFYVIMTRRMSSTETSESLIL 190
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
V+ + L+ G+ + + A + +
Sbjct: 191 FSALAPTVLLLPMLPFSFSLPHDGWHWFILLMLGVFGGVGHWLLVQAYRLATTTALAPYP 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y+ + M++S + KQ D + I+V + + + +++
Sbjct: 251 YSQMVWMVISGWIVFKQFPDRWTLVGAAIIVASGLYIVHREHRLRLQSRAA 301
>gi|284053785|ref|ZP_06383995.1| hypothetical protein AplaP_20207 [Arthrospira platensis str.
Paraca]
Length = 566
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/334 (11%), Positives = 101/334 (30%), Gaps = 37/334 (11%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH---------------- 58
NA +G + ++ + + + L + S +
Sbjct: 232 QAPNAPSSVQVGLFLALMSALVLSLFNVCLRILLKTSDTPKVMFGLFEVDGVITPGLGNS 291
Query: 59 ------RVLWSLPGV-FFAIVYFSGGLSLLKDTLKNPK--AVGMLVFSATILAVHWGFFI 109
R++ + + F A + S ++ + + ++ S L +
Sbjct: 292 LLILLLRMIVVMLLMPFLATFLYPAVWSDIRRFFNSGDSKLMATVIGSGFFLFLSQVCIY 351
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT--LHSGI 167
A+ + +FV P+I+V +R + ++I A I++ ++ G
Sbjct: 352 IAIGEIPTGIAITIFFVYPIITVLASWGLFGDRPSLIRIGAMFTILIGGILSLPNFFGGA 411
Query: 168 PLLSLA----------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
+ + + +L ++
Sbjct: 412 AGNTEIGVLAALGAGIAFAGYVLLTQIAAGKLHPIPFSLVNFASIFVFCSLSLMLLPDNL 471
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
G E P + G+L + + ++ I+ A + I+ + P L + + I
Sbjct: 472 GLEVNPDLWNPIIIGGAILGVLTLLSYLLNNFAIRSAGAALASIIGTSGPALTALLAFLI 531
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + + + G+V+I + + ++ + +
Sbjct: 532 IGEALSFKQISGMGLVIIGVGSMSVERMLLAKRK 565
>gi|256026512|ref|ZP_05440346.1| transporter [Fusobacterium sp. D11]
gi|289764524|ref|ZP_06523902.1| transporter [Fusobacterium sp. D11]
gi|289716079|gb|EFD80091.1| transporter [Fusobacterium sp. D11]
Length = 282
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/280 (13%), Positives = 96/280 (34%), Gaps = 13/280 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSV-LEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+++ A I +G+T + T+ S L +IS R L + + K
Sbjct: 9 IYMVIATIFFGMTYVLTKICLNYSTELHIISFRFLIAFVISLIFL--------QKKIFPI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K + + + +L + + + SF ++ + F +F KE+
Sbjct: 61 KIKEILYSLILSVLLFMVFITMTIGVKYTTATNASFLISLSVIFIPFFSWIFNKEKPKKS 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I ++ ++ ++++TL + I ++ V ++ + +
Sbjct: 121 IFIVLIIALIGIMLLTLDKNLEFHIGDILCLICSLLFSFHVLITERFVKNNNPITLGVLQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
AL + +I + + I + K+ + +G++
Sbjct: 181 FGGVALLSFLVQYPIEKFTLPKNEKFWISLMILSVFCTALAYIIQTVSQKKLSSTLIGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+ + FIL + + + I +++I+++ +
Sbjct: 241 LSLEPIFSGIFGYFILNEYLSPQQYIGAFLLLISIIYVTV 280
>gi|152999904|ref|YP_001365585.1| hypothetical protein Shew185_1372 [Shewanella baltica OS185]
gi|160874529|ref|YP_001553845.1| hypothetical protein Sbal195_1411 [Shewanella baltica OS195]
gi|151364522|gb|ABS07522.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS185]
gi|160860051|gb|ABX48585.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS195]
gi|315266768|gb|ADT93621.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS678]
Length = 283
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 110/292 (37%), Gaps = 10/292 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M L + +L L + LE V +++ +R L++ V + G L L
Sbjct: 1 MQPLLMILATQLLIASGNLLVKLLENDAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + F+ A+L + + +P++ + L ++FL ER
Sbjct: 61 YYKVHLARALL-------IGLGNAIFMLAILHLPLATVTAVIYTSPLLLLVLSALFLHER 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +A ++ +L+++ + A A ++ + + +
Sbjct: 114 IGYRRSVAGIIGFTGILLISQP--TEFNLYIGLAFFGAMTSALNSLILKAYSTHEHPFSM 171
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L F +++ + ++P + GL + + + +RA S + +
Sbjct: 172 LFWSNAFAMIFLIPATLYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPV 231
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
EYT + + +IL + + V I G+V+ + ++ + K++
Sbjct: 232 EYTGLIFAALLGWWILDEELSLVMLIGIGLVIFSSILPSYSELKAKWKSRRS 283
>gi|70729890|ref|YP_259629.1| hypothetical protein PFL_2522 [Pseudomonas fluorescens Pf-5]
gi|68344189|gb|AAY91795.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
Length = 316
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 93/301 (30%), Gaps = 18/301 (5%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ +WG+ + + ++ + I+ R + V + + L L +
Sbjct: 14 LMVGLCAIWGLQQVALKATASDIAPVLQIALRSGGAALLVGLLMCWRGERLGLGDGHWRP 73
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
VG L +L + T + F Y ++ L + ERL Q
Sbjct: 74 GLLVGGLFALEFLLVGEGLRY-----TTASHMAIFLYTAPIFAALGLHWLMPAERLKPAQ 128
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA------------IAVTWSAYCFARKTIPVGSSEG 195
+ + +++ V W A + + SS
Sbjct: 129 WLGIGVAFGGIVVAFSGPAAAGHGGGSHVLLGDFLGVLGGVAWGATTVVVRCSRLASSPT 188
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L ++ + + + +++ F I+ ++R
Sbjct: 189 TRTLQYQLLGAFVWLGLAALLTDQTSIHFTPLVVASLGFQVLVVSFASFLIWFTLLRRYP 248
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S +G++ + PL I V++L +P++ +V+ +V+ + + ++
Sbjct: 249 ASRLGVLSFMTPLFGIGFGVWLLHEPLEPNFIFGALLVLAGIVMVSGYEWLRQRFKRNRE 308
Query: 316 S 316
S
Sbjct: 309 S 309
>gi|222086229|ref|YP_002544761.1| hypothetical protein Arad_2705 [Agrobacterium radiobacter K84]
gi|221723677|gb|ACM26833.1| conserved hypothetical membrane protein [Agrobacterium radiobacter
K84]
Length = 303
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 88/300 (29%), Gaps = 9/300 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L++ + + + ++ + ++ E+I R L++ V+ +
Sbjct: 2 PRTKNTQGALYMAASMAGFACSDALSKSVISVMNAGEIIFIRGLFTSIIVYLLARHMGAL 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
S M+ A+ G +I AL S P+ ++
Sbjct: 62 RSW------KVILQPMIALRIACEAIAAGTYITALGMMPIANASAIQQAVPLAVTLGAAL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FLKE + + A ++ +LI+ + A+ + + +
Sbjct: 116 FLKEPIGWRRCAAIIVGFAGVLIIVRPDPQGFTTAALLSIACMFVTVARDLATRCINKDV 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI--GYGLLNSFVFCIFSYGIKRAK 255
+ V A+ ++ + T F +L + ++ +
Sbjct: 176 PSLMVTVCTAVSISIFGALLTAPLGGWQPVSLTSFSHILLASVLVLIGYQATILAMRTGE 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+S V Y + + + + + D I IV+ + + +
Sbjct: 236 ISFVAPFRYVSLIWSALLGLLFFGEVPDVWTFIGAAIVIASGIYTFYRERKRQAAQPIAQ 295
>gi|83644349|ref|YP_432784.1| DMT family permease [Hahella chejuensis KCTC 2396]
gi|83632392|gb|ABC28359.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Hahella chejuensis KCTC 2396]
Length = 305
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 81/283 (28%), Gaps = 5/283 (1%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A +LW + L Q SV +++ L S+ + A+++ ++
Sbjct: 17 YGLSAVLLWSTVATAFKLALAQQSVSQLVFFASLTSVLALGAALLWQGRLAEAMRS--LR 74
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
L F +++ YA + + ++ FL FL RL L
Sbjct: 75 ENGWRALCFGLLNPLLYYHILFYAYDLLPAQVAQPINYTWALMLAFLAVPFLGHRLTRLD 134
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI--EMCVLAI 205
+IA L+ +++++ L + A + L
Sbjct: 135 VIAMLVSYSGVVVISFGGDDSGRPLNLIGIALALVSTLVWAAYWILNSRDKRDPVIGLFQ 194
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L IG + S + + +
Sbjct: 195 NFLLATPCAAILAWPLNLAPAALGGAIYIGLFEMGVTFMLWLMAMKYTRHASRISNLIFI 254
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+P + ++ FIL + I + + G +V + +
Sbjct: 255 SPFISLLLIHFILGEKIHMLTLVGLGFIVAGLAIQARSAKKGR 297
>gi|206564570|ref|YP_002235333.1| hypothetical protein BCAM2732 [Burkholderia cenocepacia J2315]
gi|198040610|emb|CAR56596.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 299
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/293 (18%), Positives = 112/293 (38%), Gaps = 6/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G + A L+ + Y + L ++ L++ + RV+W+ PG I +L+
Sbjct: 9 RGLMLSVMASTLFALMSAYAKLLAPLTGLDIFAWRVVWTAPGALALIALRGRWPALVGLA 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ + + L SA +L V F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRCARDWRLLIALPVSAALLGVQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L + + + F + S F
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAIEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + + + L G G+L++ + + ++ GI
Sbjct: 189 ALL---CPIALAMVATSTTRVAGHPLLWAVLLPGLGILSTLALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++V S+ +L + + + +G + IA+ + + + + +
Sbjct: 246 LGYVEPVLLVVVSLLLLGETLSVAQLATYGPIWIAVALTAWHSAMLMRRLPAR 298
>gi|160886826|ref|ZP_02067829.1| hypothetical protein BACOVA_04840 [Bacteroides ovatus ATCC 8483]
gi|156107237|gb|EDO08982.1| hypothetical protein BACOVA_04840 [Bacteroides ovatus ATCC 8483]
Length = 305
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 102/300 (34%), Gaps = 18/300 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF A ++WG+ + L++ S + V + R++ + + ++
Sbjct: 3 KSKNLYGHLFALTANVMWGLMSPIGKSALQEFSPISVTTFRMVGAAAAFWILSMFCKQ-- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + S L + G FI+ L S P++++ + +++
Sbjct: 61 ----EHVNHQDMLKIFFASLFALVFNQGVFIFGLSMTSPIDASIVTTTLPIVTMVVAAIY 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKT 187
LKE + + +++ + + LI+ + S G L +A +
Sbjct: 117 LKEPITNKKVLGIFVGAMGALILIMSSQAGSNGNGSLIGDLLCLVAQISFSIYLTVFKGL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S+ M + A + S + + + L + +
Sbjct: 177 SQRYSAVTINKWMFIYASMCYIPFSYYDISTIQWTSVSTVAILQVLYVVLGGSFLAYLCI 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ ++++ + + I +V + + +
Sbjct: 237 MTAQRLLRPTVVSMYNYMQPIVATIAAIAMGIGSFGWEKGIAIALVFLGVYIVTQSKSRA 296
>gi|254473420|ref|ZP_05086817.1| membrane protein [Pseudovibrio sp. JE062]
gi|211957536|gb|EEA92739.1| membrane protein [Pseudovibrio sp. JE062]
Length = 296
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 94/296 (31%), Gaps = 12/296 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G A + + + L + + + +++ R +L + + L
Sbjct: 6 IGISMRIGATLFFTLMVLCVKLTSGTIPLGQMVFFRSAIALIPLVLFLRLTDDFPGGL-- 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ K + + A + + +VTP+ ++ L + L E++
Sbjct: 64 ---STKRPFGHIRRCLLGAAAMFSSFATIRYLPIAEATIIGYVTPIFTMILARIILGEQV 120
Query: 144 NHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ I L +L + L L +A + I V S
Sbjct: 121 TSARWIGVALGFSGILTLILPQLTGIQGNEDYLIGVSLGFLTAMLTSVAMIQVRSLTKTE 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ AL V+ G + + ++ + LIG G + + G K ++ S
Sbjct: 181 NAGAIAFYFALTCAVFGGATLPLGWATPSLEEYALLIGAGFAGGVAHILMTLGYKYSEAS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ EY + + +++ + I + + ++ ++ + +T
Sbjct: 241 KLAPFEYLSLVFAVLADLLIFNIIPGSNFYVAAAFIIASVSFVAMKDRPKGKAVRT 296
>gi|254430571|ref|ZP_05044274.1| integral membrane protein, DUF6 [Cyanobium sp. PCC 7001]
gi|197625024|gb|EDY37583.1| integral membrane protein, DUF6 [Cyanobium sp. PCC 7001]
Length = 312
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 96/296 (32%), Gaps = 19/296 (6%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFF 69
S +++ PT+ + + + + + + + LE + EV+ R L S+ +
Sbjct: 19 SARMTRGTPLAPTLQ----MVASALAFSVMGVCVKQLEGRIPAAEVVLARALVSVVLSWG 74
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ + +L++ I + AL+ + ++ P
Sbjct: 75 LL--------RRAGVDPWGQRRALLLWRGVIGTLALFCVYAALMALPLASATVLQYLYPT 126
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLI------MTLHSGIPLLSLAIAVTWSAYCF 183
+ L + L E + ++A + +L+ + + + A
Sbjct: 127 FTALLAWLALGEPIGRRVLLAMAVGWAGVLLVAQPAPLFDGATPLQPLPVLIAVAGALAT 186
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
A + V S + ++ L V + + L D ++L G G+
Sbjct: 187 ALAYVSVRSLGRTEHPLVIVFYFPLVAVPLSLPLVVLNPVLPTPTDVVWLAGVGVFTQLG 246
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ + + Y L + + + +D + +V++A ++
Sbjct: 247 QVSLTRGLTALPAARATALSYVQVLFAGLWGWLLFAEGLDGWTILGALLVLLATLI 302
Score = 42.6 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 26/76 (34%)
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
L+ G++ + + L++ +++Y P + + L +PI
Sbjct: 83 PWGQRRALLLWRGVIGTLALFCVYAALMALPLASATVLQYLYPTFTALLAWLALGEPIGR 142
Query: 285 VRTIVFGIVVIAMVVY 300
+ + +++
Sbjct: 143 RVLLAMAVGWAGVLLV 158
>gi|170737085|ref|YP_001778345.1| transporter DMT superfamily protein [Burkholderia cenocepacia
MC0-3]
gi|169819273|gb|ACA93855.1| RarD protein, DMT superfamily transporter [Burkholderia cenocepacia
MC0-3]
Length = 299
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/293 (18%), Positives = 111/293 (37%), Gaps = 6/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL--- 81
G A L+ + Y + L ++ L++ + R++W+ PG I +L+
Sbjct: 9 RGLTLSVMASTLFALMSAYAKLLVPLTGLDIFAWRIVWTAPGALALIALRGRWPALVELA 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ + V L SA +L V F++A L + S YF+ P+ V +G + E
Sbjct: 69 RRSARDWRLVIALPVSAALLGVQLWLFLWAPLHGRMLEVSLGYFLLPLTMVLVGRFYYHE 128
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ A L + + + F + S F
Sbjct: 129 RLDPLQWAAVACAALGVAHEVWATRAFAWPTLVVALGYPPYFVLRRRINADSLAAFAVEI 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
VL + + L G G+L++ + + ++ GI
Sbjct: 189 VLL---CPIAFAMVATSATQVAGQPLLWAALLPGLGILSTLALASYLKASRMLPMALFGI 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++V S+ +L + + + +G + +A+ + + + + +
Sbjct: 246 LGYVEPVLLVVVSLLLLGETLSVAQLATYGPIWVAVALTAWHSAMLMRRLPAR 298
>gi|121609697|ref|YP_997504.1| hypothetical protein Veis_2745 [Verminephrobacter eiseniae EF01-2]
gi|121554337|gb|ABM58486.1| protein of unknown function DUF6, transmembrane [Verminephrobacter
eiseniae EF01-2]
Length = 291
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 77/291 (26%), Gaps = 7/291 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
L + ++W + T+ LE EV R L++L + + G
Sbjct: 5 SHSRAVLLMVATALMWSTAGVVTRHLEHARSFEVTFWRSLFTLLALLVILPAMQGRAVFA 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
S V + F+ A++ + P+++ F+
Sbjct: 65 AMHKTGRMLWI----SGLCWCVMFTAFMLAIMLMPVANVLLTMAAGPLLTALFARAFIGH 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R+ +A + L ++ M L V A + +
Sbjct: 121 RIAPRTWVAIAVAGLGIVWMYGSQVTGLPLAGTIVALCVPVAAATNWTLVQHAQRHGQAV 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR---AKLST 258
L L V + + + L + + ++ +
Sbjct: 181 DLVPAVLVGAVLSVGATLPLALPLQASLHDIGLLALLGLAQLAIPCVLAVRCARVLRAPE 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + I+ + + +V+ A+V L +
Sbjct: 241 IALLSLLEVIFGILLAWLGAGEKPGAAVLTGGALVIGALVFNELLAWKDQK 291
>gi|325285089|ref|YP_004260879.1| hypothetical protein Celly_0173 [Cellulophaga lytica DSM 7489]
gi|324320543|gb|ADY28008.1| protein of unknown function DUF6 transmembrane [Cellulophaga lytica
DSM 7489]
Length = 307
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 99/306 (32%), Gaps = 12/306 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+V +G+ + + LE S + + + L GV +
Sbjct: 1 MEKLRGVLYVLIGAASYGVLATFVKKANLEGFSTSGLNTLQYLIGFVGVALLALLSKKNR 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ K + +++ T + F+ +L + + V L
Sbjct: 61 AVTKTKENKNGKLKLVL-FGTAAGLTSYFYYLSLNYIPVSVAIIFLMQAIWMGVVLEMFL 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K+ ++ L++ +LL+I+ L T + +S +
Sbjct: 120 SKK-VDKLKLFGSLLVIVGTLFAVNVFNESKAIDPTGFVLGVMASMCYTATLYASNTIAV 178
Query: 199 EMCVL--------AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + ++WN E + L F+ G
Sbjct: 179 SLPNMVRSKYLVLGGLLIVLLIWNTDLLTEFDYSSWSFWKYGLFLGFFGAVLPPIAFNKG 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ + I+++ IL + I V+ I+++++ V +++N K
Sbjct: 239 FPITGIGLGSILTSLEIPVSILTASIILGEEIKGVQWFGVFIIIVSVAVINYKSILNDIK 298
Query: 311 NKTKKS 316
N +S
Sbjct: 299 NTKNQS 304
>gi|262377278|ref|ZP_06070502.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262307731|gb|EEY88870.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 293
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 99/287 (34%), Gaps = 8/287 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
A+ L + C+ L+ + + ++ + V V+ R + L I
Sbjct: 2 SAPAAPHLFKAILLLTCSAFLFSVMGVCIRYASETVDNATVVFFRNVVGLFIFLPLIFNK 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G + + M + A + + F YA+ + + +P+ +
Sbjct: 62 GRGF-------FKTEKLWMHTWRAVVGLIAMYGFFYAIAHLKLSNAMVFTYSSPIFIPLI 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FLKE++ + AA + + +L + +++ +++ A + V +
Sbjct: 115 VWLFLKEKITASMLAAAGIGFIGVLCVAKPDSGLFNLMSLIGLSASFLAAMAFVTVRALT 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ L + + + + + +LI GLL +F + S K A
Sbjct: 175 KTESPEKIVFYFCLIGSLISVIPMFWLWRPYTLTELSYLITAGLLANFSQLLMSNAYKLA 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+G + Y A + + D I G++ A+++
Sbjct: 235 PAGQIGPVNYAAIFFAGMWGFLFWGEVPDRYSLIGLGLIFCAILLCS 281
>gi|225374645|ref|ZP_03751866.1| hypothetical protein ROSEINA2194_00264 [Roseburia inulinivorans DSM
16841]
gi|225213504|gb|EEG95858.1| hypothetical protein ROSEINA2194_00264 [Roseburia inulinivorans DSM
16841]
Length = 282
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 92/293 (31%), Gaps = 12/293 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S++ + ++ GT++V + I + + + + + + L + R + S +F
Sbjct: 1 MSEKKYNKNSLQGTVYVLLSAICFSLGGVLIKSI-PWNSLSINMVRSILSFILIFAY--- 56
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + M++ A + V F+ A F PV +
Sbjct: 57 -------QRTQGRKFVFNKMVLLGAVLNFVMALTFVMATKMTTAANAIVLQFTEPVFLIL 109
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + +++ ++ +L++ + S + + +
Sbjct: 110 IVWIVYRQKPKKDAVLTCILVLCGIFCFFFESLSTGGMAGNILAIVSGVTYAGVFLIKKF 169
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G E ++ + VV F E F L+ + + S G+ R
Sbjct: 170 PGGDFESSLMVSHLISIVVGIPFLMRETVFTPT-VWGYVLVLGIVQFGLSYVFLSRGLDR 228
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
T + P+L + + I + +V+ + VY L
Sbjct: 229 VSPVTASLTSTIEPILNPILVAIFCGETIGMLSIFGAVLVIGSATVYNLRQAK 281
>gi|163733444|ref|ZP_02140887.1| integral membrane protein, putative [Roseobacter litoralis Och 149]
gi|161393232|gb|EDQ17558.1| integral membrane protein, putative [Roseobacter litoralis Och 149]
Length = 301
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 96/296 (32%), Gaps = 8/296 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + G ++ + + +F+ + ++ R L L + AI
Sbjct: 2 SMTKTSQPLTGIFWMLVTGVCFISVTALVKFMGTGLPPAQMAFLRYLLGLVFLIPAI--- 58
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L+ P+ + F I + + YA+ + ++ P+
Sbjct: 59 ----GALRAAHLTPRQWKLFGFRGVIHGLGVISWFYAMTRIPLADVTAMNYLAPIYVTIG 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+VFL E+L +I A ++ ++ I+ + S A+ ++A F + +
Sbjct: 115 AAVFLGEKLAFRRIAAVVMALIGAFIILRPGFREISSGHFAMLFTALAFGASYLTAKVTA 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V+A+ ++F + + + + L + A
Sbjct: 175 DEVKPSVVVAMLSIFVTIVLAPFALIDWVTPTLWELFLLFCIACCAVAGHYTMTLAFAAA 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ + +T + ++ F + +D + +++ ++ + K
Sbjct: 235 PVTVTQPVTFTQLIWAVLLGYFAFGEAVDIWVVVGGVVILSSVTFITWREAVLKRK 290
>gi|86358479|ref|YP_470371.1| putative transporter, permease protein [Rhizobium etli CFN 42]
gi|86282581|gb|ABC91644.1| putative transporter, permease protein [Rhizobium etli CFN 42]
Length = 318
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 98/296 (33%), Gaps = 16/296 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG +F + + + ++ + + V EV + R + + +++
Sbjct: 17 MGLALMFLSVMFSPLIDIFAKLAVVTVPSAEVTAGRFVVQALCMLPIVLWRRSF------ 70
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + I+ + F+ L +FV P+I LG +FLKE +
Sbjct: 71 ADFSWRQSLFHAIRGLIITISMISFVTTLKYMVVADAIAIFFVEPIIVTILGGIFLKETI 130
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A + L++ S + +A+ +A C A + +
Sbjct: 131 GWRRYTACGVGFFGALLIIQPSFNEVGYVALLPVLTALCIAIFVLMTRVLSHKEDPWAMQ 190
Query: 204 AIPALFYVVWNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ +++ S + ++ G G + + Y + A
Sbjct: 191 FQMGIWGLIFCAVLLFAGDGSGSDIFDPVMPAGSAWFYVAGVGAMAAIAGIFGVYAYRAA 250
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
ST+ ++Y + + + + D ++ + I++ + + L + K
Sbjct: 251 PASTLAPLQYFEIVSATIFAWLVFGDFPDAIKWLGIMIIIASGIYILWRERRFASK 306
>gi|300856405|ref|YP_003781389.1| putative permease [Clostridium ljungdahlii DSM 13528]
gi|300436520|gb|ADK16287.1| predicted permease [Clostridium ljungdahlii DSM 13528]
Length = 299
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 106/296 (35%), Gaps = 14/296 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
++ + +++G ++ ++++ S E+ R + + +S
Sbjct: 5 IYFILSMMIFGTIGIFVRYIDLASS-EIALLRGFIGSLFLLTITIVNKQKIS----WTNI 59
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ +L+ S+ L +W F A S SY+ PV + + + LKE+++ +
Sbjct: 60 KNNIPVLLLSSFALGFNWIFLFQAYKHTTIANASSSYYFAPVFVIVMSPIVLKEKISLKK 119
Query: 148 IIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + + ++ + G + I + + G I
Sbjct: 120 AACISISVFGMFLIVQNRGNGGTEYNHLLGICYGITAAVFYATLMLTNKFIKNMNGLEIT 179
Query: 200 MCVLAIPALFYVVWNGFS-GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L++ + + + + F + + +I + F +F YG+K + +
Sbjct: 180 LLQLSLATVMLIPYVFVTERVNLFQITGLSVACIIILGIIHTGLGFYLFFYGMKGLRGQS 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + Y P+ + +S I + + + I +++ + + + + K K
Sbjct: 240 IAALSYIDPITSLFTSFIIFGENMTVFQIIGAVLLLGSTFISEISKNYDCSSKKNK 295
>gi|229056354|ref|ZP_04195771.1| Transporter, drug/metabolite exporter [Bacillus cereus AH603]
gi|228720973|gb|EEL72517.1| Transporter, drug/metabolite exporter [Bacillus cereus AH603]
Length = 310
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 99/294 (33%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 7 RRIGLMMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILAFLLIKKQNIF 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K+ + + + FI + + F+ PV+ +
Sbjct: 67 HIWKHPKHYIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYVAFEQ 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
K+ +QI+A + + + + I + L A+ ++ Y ++
Sbjct: 125 KKFPASMQILAIITALTGTYFIITNGSIENIVLSKAAIIFGLLTAIGFAFYTLHPASLIK 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + F ++
Sbjct: 185 ECGTTIVIGWGMLIGGIALLICNRSFGWNQLSQTFTLQTFSMLILIITSGTLSFLLYIGS 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 245 LKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|71083137|ref|YP_265856.1| transporter [Candidatus Pelagibacter ubique HTCC1062]
gi|71062250|gb|AAZ21253.1| Transporter [Candidatus Pelagibacter ubique HTCC1062]
Length = 295
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 78/288 (27%), Gaps = 6/288 (2%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+WG T + ++ + + R V F
Sbjct: 7 LFCALLCTFIWGTTFIAQDTGMDDIGPFTFNAVRFFVGFLVVAPLAFIFERKKISKSVQK 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + L + ALL +F + F+ K+ ++
Sbjct: 67 NQKEFINLAILIGLSLFLGSALQQVALLYTDVANAAFFTIFYVPMVPFIIFFMYKKPIHW 126
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE-----GFFIEM 200
+ LL ++ ++T + + + A+ ++ I G I
Sbjct: 127 SIWPSVLLCVMGGYLLTNFYSATVRNGDALIIIGAFFWSTHIIFTGKIIEKYNLPLTIGA 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
I + ++ + L L F + Y K +
Sbjct: 187 IQTLIVSSLSLIIGLIFEDFIWSNILKEKFQILYAGILSGGLAFVLQIYAQKNISPAPSA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ + +++ +L Q +D ++ ++ L ++
Sbjct: 247 IIFSLEGVFATIAAWILLDQILDINNLFGCLFILFGVLFSQLAPILKK 294
>gi|291570816|dbj|BAI93088.1| DUF6 transmembrane protein [Arthrospira platensis NIES-39]
Length = 566
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/334 (11%), Positives = 101/334 (30%), Gaps = 37/334 (11%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH---------------- 58
NA +G + ++ + + + L + S +
Sbjct: 232 QAPNAPSSVQVGLFLALMSALVLSLFNVCLRILLKTSDTPKVMFGLFEVDGVITPGLGNS 291
Query: 59 ------RVLWSLPGV-FFAIVYFSGGLSLLKDTLKNPK--AVGMLVFSATILAVHWGFFI 109
R++ + + F A + S ++ + + ++ S L +
Sbjct: 292 LLILLLRMIVVMLLMPFLATFLYPAVWSDIRRFFNSGDSKLMATVIGSGFFLFLSQVCIY 351
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT--LHSGI 167
A+ + +FV P+I+V +R + ++I A I++ ++ G
Sbjct: 352 IAIGEIPTGIAITIFFVYPIITVLASWGLFGDRPSLIRIGAMFTILIGGILSLPNFFGGA 411
Query: 168 PLLSLA----------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
+ + + +L ++
Sbjct: 412 AGNTEIGVLAALGAGIAFAGYVLLTQIAAGKLHPIPFSLVNFASIFVFCSLSLMLLPDNL 471
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
G E P + G+L + + ++ I+ A + I+ + P L + + I
Sbjct: 472 GLEVNPDLWNPIIIGGAILGVLTLLSYLLNNFAIRSAGAALASIIGTSGPALTALLAFLI 531
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + + + G+V+I + + ++ + +
Sbjct: 532 IGEALSFKQISGMGLVIIGVGSMSVERMLLAKRK 565
>gi|289523913|ref|ZP_06440767.1| integral membrane domain protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502569|gb|EFD23733.1| integral membrane domain protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 311
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 80/285 (28%), Gaps = 13/285 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + ++W + LE + L + R + S + + + G L
Sbjct: 22 LIALAVTLLVWSSAFAAIKAALEHYTPLHLAVLRFMISSLILLPFVFFKFGLPQL----- 76
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ SAT + ++ T S PV + L + LKER+N
Sbjct: 77 --KDLSFIFFLSATGMLLYHIPLCIGEQTVAAGSASLLIATAPVFTAILAVIILKERMNP 134
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV-----GSSEGFFIEM 200
L ++ +++L G L L A F +
Sbjct: 135 LGWAGIIISFAGAAVISLGEGDFGLELGALWISCAAFMESFYFVYQKKLLPKYGAFRLTT 194
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ + + + + + ++Y R S V
Sbjct: 195 YVIMAGTILMIPFGKDLLKAVITAPPSATITVVYLAIFPTCIGYAGWAYATSRNPASLVA 254
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ P++ I + L + + + I ++ + +
Sbjct: 255 SSLFLNPVMAIFIAWIWLDEMPTFISIMGGVIAIVGVWMLQRSRR 299
>gi|237719836|ref|ZP_04550317.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293373598|ref|ZP_06619946.1| putative membrane protein [Bacteroides ovatus SD CMC 3f]
gi|229451105|gb|EEO56896.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292631423|gb|EFF50053.1| putative membrane protein [Bacteroides ovatus SD CMC 3f]
Length = 305
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 101/300 (33%), Gaps = 18/300 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF A ++WG+ + L++ S + V + R++ + + ++
Sbjct: 3 KSKNLYGHLFALTANVMWGLMSPIGKSALQEFSPISVTTFRMVGAAAAFWILSMFCKQ-- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + S L + G FI+ L S P++++ + +++
Sbjct: 61 ----EHVNHQDMLKIFFASLFALVFNQGVFIFGLSMTSPIDASIVTTTLPIVTMVVAAIY 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKT 187
LKE + + +++ + + LI+ + S G L +A +
Sbjct: 117 LKEPITNKKVLGIFIGAMGALILIMSSQAGSNGNGSLIGDLLCLVAQISFSIYLTVFKGL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S+ M + A + S + + + L + +
Sbjct: 177 SQRYSAVTINKWMFIYASMCYIPFSYYDISTIQWTSISTVAILQVLYVVLGGSFLAYLCI 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + V + Y P++ ++++ + + I +V + + +
Sbjct: 237 MTAQRLLSPTVVSMYNYMQPIVATIAAIAMGIGSFGWEKGIAIALVFLGVYIVTQSKSRA 296
>gi|229028373|ref|ZP_04184497.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1271]
gi|228732921|gb|EEL83779.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1271]
Length = 310
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 98/294 (33%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 7 RRIGLIMIIIGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + + + FI + + F+ PV+ +
Sbjct: 67 QIWKHPKYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYVAFGQ 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
K+ +Q++A + + + + I + L A+ ++ Y ++
Sbjct: 125 KKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + LI + + F ++
Sbjct: 185 ECGTTVVIGWGMLIGGIALLICNRSFGWNQLSQTFTPKTFSMLILIIISGTLSFLLYIGS 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ V S+ L + + + +V++++ +P
Sbjct: 245 LKYLAATETSILSSIEPLVAAVVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|237714301|ref|ZP_04544782.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262408322|ref|ZP_06084869.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646436|ref|ZP_06724077.1| putative membrane protein [Bacteroides ovatus SD CC 2a]
gi|294809081|ref|ZP_06767801.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b]
gi|298480333|ref|ZP_06998531.1| transmembrane permease [Bacteroides sp. D22]
gi|299148390|ref|ZP_07041452.1| putative transmembrane permease [Bacteroides sp. 3_1_23]
gi|229445793|gb|EEO51584.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262353874|gb|EEZ02967.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638207|gb|EFF56584.1| putative membrane protein [Bacteroides ovatus SD CC 2a]
gi|294443716|gb|EFG12463.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b]
gi|295086627|emb|CBK68150.1| Predicted permeases [Bacteroides xylanisolvens XB1A]
gi|298273614|gb|EFI15177.1| transmembrane permease [Bacteroides sp. D22]
gi|298513151|gb|EFI37038.1| putative transmembrane permease [Bacteroides sp. 3_1_23]
Length = 305
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 102/300 (34%), Gaps = 18/300 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF A ++WG+ + L++ S + V + R++ + + ++
Sbjct: 3 KSKNLYGHLFALTANVMWGLMSPIGKSALQEFSPISVTTFRMVGAAAAFWILSMFCKQ-- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + S L + G FI+ L S P++++ + +++
Sbjct: 61 ----EHVNHQDMLKIFFASLFALVFNQGVFIFGLSMTSPIDASIVTTTLPIVTMVVAAIY 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKT 187
LKE + + +++ + + LI+ + S G L +A +
Sbjct: 117 LKEPITNKKVLGIFIGAMGALILIMSSQAGSNGNGSLIGDLLCLVAQISFSIYLTVFKGL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S+ M + A + S + + + L + +
Sbjct: 177 SQRYSAVTINKWMFIYASMCYIPFSYYDISTIQWTSVSTVAILQVLYVVLGGSFLAYLCI 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ ++++ + + I +V + + +
Sbjct: 237 MTAQRLLRPTVVSMYNYMQPIVATIAAIAMGIGSFGWEKGIAIALVFLGVYIVTQSKSRA 296
>gi|149180852|ref|ZP_01859354.1| possible drug/metabolite exporter [Bacillus sp. SG-1]
gi|148851371|gb|EDL65519.1| possible drug/metabolite exporter [Bacillus sp. SG-1]
Length = 308
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/296 (8%), Positives = 86/296 (29%), Gaps = 7/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M +L+ A WG++ + + L+++ +++ R + ++ +
Sbjct: 5 NSKMAASLYAGMAIFFWGVSFVSAKVVLDKLDPFTLVTFRFGIGAVFLLMIVLLNGERMR 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + +L L + ++ F + +FL
Sbjct: 65 FPLNYFPHLFILAILGTFCHQLLQTTSLIFIDASSAGWLISVTPVFTVFLSMIFLHEKMN 124
Query: 140 KERLNHLQIIAALLIILSL------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + + +++ L+ G L+ L+ +
Sbjct: 125 FRKAIGIITAIIGVFMVTTAGAENRFEFGLNFGFFLMLLSTLNWAVYTVLLKSLKIPLRP 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ ++ + L + + ++ + ++ ++
Sbjct: 185 TVLTFYITLIGFIVSTPFIIRNHGWERLPDLSTVEWGHLIFLGVFVSGTGYWFWAKSLEV 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ S G++ Y P++ ++++ IL + + I++ +
Sbjct: 245 LQASQAGVLMYLEPIVTFLAAIIILHEKAMMMSIAGGLIIIAGVAAVNGDITGRFR 300
>gi|30021472|ref|NP_833103.1| drug/metabolite exporter family protein [Bacillus cereus ATCC
14579]
gi|29897027|gb|AAP10304.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
Length = 294
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 97/293 (33%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G + + A +W + +++ L+ + L ++ R + + ++ +
Sbjct: 2 KQTILGAICLSLAASIWVGMYVVSKYVLDFIPPLTLVWLRFIIAFVVLYGILKLA-EKKQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T++ + + S TP V ++ L
Sbjct: 61 KKKVTIRKKDWLLFAWIGFIGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAALIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L ++++ ++ + ++I+ G +L A + +
Sbjct: 121 KEKLTARRLLSTIIATIGVIIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASIQF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ + + + L + + F +++ G+
Sbjct: 181 SSLVITTYAIFFSLFFITPFMIWELQAASIGTVNTYVILGVLYLGIVSTAGAFFLWNKGL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
K S + + P++ + +L + +++ I +++ ++++
Sbjct: 241 KLLDASIGSLFFFFQPIVGSLLGWLLLNETLNSNFFIGGILIICSVLITTFEK 293
>gi|329927869|ref|ZP_08281930.1| putative membrane protein [Paenibacillus sp. HGF5]
gi|328938270|gb|EGG34665.1| putative membrane protein [Paenibacillus sp. HGF5]
Length = 304
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 93/276 (33%), Gaps = 13/276 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + WG + L+ + L+ + +I+ R + L + ++F
Sbjct: 1 MKPLKADLMILFITMCWGSSYLFMKMGLDSLGAFNLIALR--FGLAFMLAGAIFFPRLRR 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T++ IL + + + L T F +T V + +
Sbjct: 59 VNLKTIRYAML------LGFILFIMFTALTFGLKTTTASNAGFLISLTVVFVPLIHTFLF 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG----SSEG 195
++++ +I++ LL + + ++T+ + +A C+A V +
Sbjct: 113 RKKIEKKRIVSILLALTGIALLTIQLPFAFKIGDLFCIAAALCYALHINIVSTAAQKVDA 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L L+ + + + T L+ + + F + K
Sbjct: 173 LSLGILQLGFTGLYAFLSSLLLETPVWPSSTDSWTAVLVLSVVCSGLGFIFQTIAQKYTT 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ G++ P+ + + + +D +
Sbjct: 233 ATRTGLVFSLEPVFAALFGYWFANEVMDANQYAGAA 268
>gi|294500359|ref|YP_003564059.1| integral membrane protein [Bacillus megaterium QM B1551]
gi|294350296|gb|ADE70625.1| integral membrane protein (DUF6) [Bacillus megaterium QM B1551]
Length = 302
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/281 (9%), Positives = 78/281 (27%), Gaps = 5/281 (1%)
Query: 29 FVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ ++WG++ ++ ++L + ++ R L + + + +
Sbjct: 7 ALIGLSLIWGLSFVFMKWLLPSAGIWGIVFFRCLAGAIILLPFLWWKRRKVKEKLPWKAL 66
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
A L I + T+ + +F + ++ + L
Sbjct: 67 IVVGIFNCGLAWGLISLSETEINSTTASILNATTPIWTGLIGFILFSYRLTGRQWIGILI 126
Query: 148 IIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+L++++ + GI + +A A ++ + S +
Sbjct: 127 GFFGILVLMNFQFGQIFGKGFVGIGTMLVACICYGLAGQLTKRFLSEVSVLTITTFTLLT 186
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + +P + + I+ Y K +
Sbjct: 187 GAIIGLIGMLITEPFKLDLLIHPLPILAIVGLGCFGSGLGQLIYFYINKNGGPELAATVT 246
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
Y P +V +L + I I I+ + + +
Sbjct: 247 YLIPASAMVWGYLLLGETITPNVVIGLLIIFTGVYLSSRKS 287
>gi|290993422|ref|XP_002679332.1| predicted protein [Naegleria gruberi]
gi|284092948|gb|EFC46588.1| predicted protein [Naegleria gruberi]
Length = 431
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/321 (8%), Positives = 90/321 (28%), Gaps = 41/321 (12%)
Query: 27 TLFVFCAYILWGITPLYTQFLE----QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+F+F +WG + + S V+ R+L + ++ +
Sbjct: 73 VVFIFLGA-IWGSAFSFIKLSVDPKFGFSAFSVVFLRLLIGGIFMLVLFIFNFVKSKEFR 131
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYAL----LTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + ++ + + + + + S P+ S+F+
Sbjct: 132 TQVNKHRGIKTILMMMVLGFFNNAVPFILVAFAEQSINSGIASILDSSIPLFSIFIAHFT 191
Query: 139 -LKERLNHLQIIAALLIILSLLIMTL-----------HSGIPLLSLAIAVTWSAYCFARK 186
ER+ L+++ ++ ++++ L + +++ +A
Sbjct: 192 LKGERITFLKLVGLIVGFGGVILVCLQQVIIGETPDDGQIVGYVTVTLAAASYGVASVIS 251
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG--------GEHFFLGNIPDTLFLIGYGL 238
F + +LF ++ + +
Sbjct: 252 KKYFDGVPSLFTACGQIFSASLFALLGVLIYDLGIDERHLSYFKHANYLAWISVAYLGIV 311
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP------IDTVRTIVFGI 292
+ F Y IK+ + + + + L + I + + +
Sbjct: 312 STGVAYVCFFYLIKKIGSTKQSL------IFGVAEGAIFLGEWENIPFYIPIIEFVGMFL 365
Query: 293 VVIAMVVYLLPTVINSGKNKT 313
+ I + + +P+ ++
Sbjct: 366 IFIGIAIVSIPSWRKIKESAK 386
>gi|89075835|ref|ZP_01162219.1| hypothetical protein SKA34_15718 [Photobacterium sp. SKA34]
gi|89048456|gb|EAR54032.1| hypothetical protein SKA34_15718 [Photobacterium sp. SKA34]
Length = 309
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 94/294 (31%), Gaps = 23/294 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+++ T+ V A + WG + + L VL + R +L +F +
Sbjct: 13 NTSLIATIGVLAAAVFWGTSFGVAKESLLYTGVLMFLVIRFCCTLLVIFPLV-------- 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
N + L + IL++ + Y L +F + + + + ++F
Sbjct: 65 ---SKKLNRQVWRQLAPTGGILSIIYLAETYGLKHTSASNAAFLISLFIIFTPAVDALFN 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARKTI 188
+ +L + A + I + ++ S + A
Sbjct: 122 RHKLAVADLFAGCIAIAGVWLLVGDSLNTVTFNIGNILILIAALGRAAFVVMTKKKMNQQ 181
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
FI++ V+ + +++ F F +
Sbjct: 182 HCDPMVATFIQLSVVTAICISLLIFTVPVDQFIIPSAPEFWIYIGYLVIFCTLFAFYFQN 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
YG+K + V + P+ + + + L + + ++ + G++V+A + +
Sbjct: 242 YGVKHTSPTQVSFLLGLEPVFGGLFAHWWLGEQFEQLQWVGAGMIVLAAMFISV 295
>gi|323697982|ref|ZP_08109894.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
ND132]
gi|323457914|gb|EGB13779.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans ND132]
Length = 298
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 99/297 (33%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G LF A +W L F+ + + + + R + + F+
Sbjct: 4 NRPLGFLFALLAVTIWSGNFLIASGFVNDIPPVTLAALRWVTATAVFLP----FARRDMQ 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+LV + T + + + T + + TPV V L +FLK
Sbjct: 60 RDMQALLDNRWELLVAAVTGVTLFNTLVYVSARTTEAVNMALFASTTPVFVVILARIFLK 119
Query: 141 ERLNHLQIIAALLIILS------------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
ER++ L+ ++ I LL MT +G ++ LA + ++
Sbjct: 120 ERISLLRGAGLVIAIAGMLAIATRGSLGVLLHMTFRAGDLVMLLAGFLWAVYSILVKRKP 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S + +L L + L L L + F +++
Sbjct: 180 AAVSRNAYLGATFLLGTLPLIPAALLENCFAPAWTLTPAVLGAVLYIGILASLVAFFLWN 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
I + +Y P+ + + F+L QP+ TV + F ++ +V+ P
Sbjct: 240 SAIMHIGPGNAALFQYFMPVFSGIGAWFLLGQPVTTVHGVGFVLIFSGVVMATRPQR 296
>gi|206974175|ref|ZP_03235092.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217958166|ref|YP_002336710.1| transporter, EamA family [Bacillus cereus AH187]
gi|206747415|gb|EDZ58805.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217068174|gb|ACJ82424.1| transporter, EamA family [Bacillus cereus AH187]
Length = 308
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 1 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGLFILSFLLIKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 61 QNIFQIWKHSRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 119 AFGQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + LI + + F +
Sbjct: 179 SLIKECGTTIVIGWGMLIGGIALLIFNRSFGWSQLSQTFTPKTFSMLILIIISGTLSFLL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + ++++++ +P
Sbjct: 239 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIILSVIFLTMPQ 296
>gi|153853752|ref|ZP_01995108.1| hypothetical protein DORLON_01099 [Dorea longicatena DSM 13814]
gi|149753502|gb|EDM63433.1| hypothetical protein DORLON_01099 [Dorea longicatena DSM 13814]
Length = 290
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 105/291 (36%), Gaps = 10/291 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S+++ S T + + A + + + + Q++ QV ++V RV+ S + +
Sbjct: 1 MSEKSMSKDTRKNVILLHIAVMCFSCSGVIGQYV-QVPAVQVAMGRVICSSLLLLAISLV 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L+L + K G+++ + ++A+HW F ++ T + + ++ P+ F
Sbjct: 60 CKDKLTL-----DSKKDYGLMILTGVVMAIHWSSFFQSIQTSSVAIGTITFSTFPLFLTF 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L + E++ I+ AL++++ +LI + + F + + +
Sbjct: 115 LEPLLFHEKICGKNILNALILLMGVLITIPEFSVENKVTIGILWGMLASFTYAVMTLSNR 174
Query: 194 EGFFIE---MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
L + + L + + ++
Sbjct: 175 YFSSRYKGRTICLYEQGTAAIALLPALVLVKAEWRPVDFAGVATIGFLCTAIAYSLYVTA 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
K K T GI+ + IV ++ L++ + +++ + Y
Sbjct: 235 QKGVKAQTAGIISGMETVYGIVFALIFLREIPTVRELVGGAVIL-GIAFYS 284
>gi|70731097|ref|YP_260838.1| hypothetical protein PFL_3736 [Pseudomonas fluorescens Pf-5]
gi|68345396|gb|AAY93002.1| membrane protein, putative [Pseudomonas fluorescens Pf-5]
Length = 297
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 100/296 (33%), Gaps = 11/296 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G+L + A ++ G + + VL+V+ R L+ + F L
Sbjct: 4 QTRRGSLEMTAAMLISGTIGWFV-LVSGQPVLDVVFWRCLFGAGTLLLICGAFG----FL 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + +A+ + V S + +W + + + Y V P I V LG++FL E
Sbjct: 59 RKNILSKRALILAVLSGVAIVGNWVLLFGSYSRASIAIGTAVYNVQPFILVALGALFLGE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ ++ L +L + G L +A +A + + G
Sbjct: 119 KITPQKLFWLGLSFAGMLAIVSAHGSQGEEGGDYLLGIALALGAAALYAFAALLIKRLSG 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ ++ L L ++ + I++
Sbjct: 179 TPPHLIALIQVCTGVLLLAPWANLGAPPQQASAWASLLTLGILHTGVMYVLLYGAIQKLP 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ G + + P+ I+ + ++ + G +++A + ++
Sbjct: 239 TALTGALSFIYPIAAILVDWVAFGHRLGLLQWVGVGAILLAAAGMQQGWTLKRRRS 294
>gi|229165880|ref|ZP_04293646.1| hypothetical protein bcere0007_8560 [Bacillus cereus AH621]
gi|228617585|gb|EEK74644.1| hypothetical protein bcere0007_8560 [Bacillus cereus AH621]
Length = 295
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 90/281 (32%), Gaps = 13/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + +
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIAFLLSGLIFY--------KHLFKI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K V A++L + + F + F +T + L ++FLK
Sbjct: 61 DFKTVKYSFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPILSAIFLKHIPEKK 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ +L I+ + ++TL S G + ++ + A + +
Sbjct: 121 VILGIVLTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGNVTKHVNSIALGVVQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L LF ++++ + L + F + + + G++
Sbjct: 181 LGFVGLFSLIFSLVMETPKLPGTIDSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ +
Sbjct: 241 FSLEPVFSAGFAFVFTGETLTGKGYLGATLILLSVLIAEVD 281
>gi|163737447|ref|ZP_02144864.1| hypothetical protein RGBS107_17988 [Phaeobacter gallaeciensis
BS107]
gi|161388973|gb|EDQ13325.1| hypothetical protein RGBS107_17988 [Phaeobacter gallaeciensis
BS107]
Length = 286
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/282 (10%), Positives = 91/282 (32%), Gaps = 8/282 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + ++L V E R L L + I P
Sbjct: 1 MLMTGFCFVAVTALVKYLGDRVPPAESAFLRYLLGLVFLLPMIGALRRS-------QLTP 53
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ G+ + + + +A+ + +++P+ ++FL ER+ ++
Sbjct: 54 RLWGLFAMRGFVHTLGVILWFFAMTQIPLAEVTAMNYLSPIYVSIGAALFLGERMALRRV 113
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A L+ ++ LI+ + + IA+ ++A F + ++ + V+A+ ++
Sbjct: 114 GAILVALIGALIILRPGFREVEAGHIAMLFTALAFGASYLLAKTTVDGTSPVVVVAMLSI 173
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ V+ + + + L + + A ++ + + L
Sbjct: 174 WVTVFLAPFAAAVWVTPTLWELAILFAVACFATAGHYTMTLAFASAPVTVTQPVTFLQLL 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + +D +++ A+ + +
Sbjct: 234 WATLLGALVFGEAVDIWVVAGGCLILAAVSFITWREAVLKRR 275
>gi|162457271|ref|YP_001619638.1| hypothetical protein sce8986 [Sorangium cellulosum 'So ce 56']
gi|161167853|emb|CAN99158.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 307
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 82/295 (27%), Gaps = 17/295 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S + +F L+ L + + + + R W+ +
Sbjct: 11 SRQRRTAQVLLFVTPALFTANMLLARATADFIPPVALAELR--WTGVVLVLLPFCGRELW 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +L + Y T Y V+PVI + L
Sbjct: 69 RNRAALRRDWARYALLGLLGMGICGAGV--YYGAATTTATNIGLIYAVSPVIIILLSRAM 126
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARK 186
ERL+ Q + A L + +L++ L G ++ A ++
Sbjct: 127 FGERLSRRQGLGAALALTGVLVIVLRGDPAALLALSFSTGDLMILGAAISWALYTVLLKR 186
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + L ++ + + + +
Sbjct: 187 WPDPLGVQARLTAIALAGAILLLPLLGWELASRGAPHFDLRTIATVVTLVLVPGVGAYAT 246
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+SY + S G++ Y +P+ V + +L + + +V+ +
Sbjct: 247 YSYITEHLGPSRTGLLLYLSPVYTAVLAWLLLGEAFALYHWLGAALVLPGLFFAT 301
Score = 40.3 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 11/114 (9%), Positives = 36/114 (31%)
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ L + + G + + + L YG
Sbjct: 40 DFIPPVALAELRWTGVVLVLLPFCGRELWRNRAALRRDWARYALLGLLGMGICGAGVYYG 99
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +G++ +P+++I+ S + + + + + + + ++V +L
Sbjct: 100 AATTTATNIGLIYAVSPVIIILLSRAMFGERLSRRQGLGAALALTGVLVIVLRG 153
>gi|163794930|ref|ZP_02188899.1| Permeases of the drug/metabolite transporter (DMT) superfamily
protein [alpha proteobacterium BAL199]
gi|159179749|gb|EDP64276.1| Permeases of the drug/metabolite transporter (DMT) superfamily
protein [alpha proteobacterium BAL199]
Length = 310
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 88/288 (30%), Gaps = 7/288 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G + + L I + + + ++ +++ R L+ + +
Sbjct: 24 RPLLGIGLMLASVALLPIMDGFAKAMADSFAITQLVWARFLFQSLLIVPLAL------GT 77
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P + + + + + F A+ T F+ P+I L + L
Sbjct: 78 SPKAMLRPSHLPLQLARGVGILIGTFLFFSAIRTMPIADALALLFIAPLIVTALSPLVLG 137
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + +A L+ L++ L A+ + FA + +
Sbjct: 138 EAVGIRRWMAVLVGFGGALVVLRPGLTVLQPGALLALGAGASFAGYVLLTRRLSHAAPPL 197
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LAI +L +V + + G + + + ++A S +
Sbjct: 198 VTLAITSLVGLVATSALLPAVWVTPQPMQLAAMAAMGAIGAGGHYLMIRAFEKAPASLLA 257
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y L + + D + I++ + + + +
Sbjct: 258 PFGYGEILTATIVGYYWFGDFPDGATWLGIAILIASGIYISVRERVRR 305
>gi|157150654|ref|YP_001449757.1| membrane protein [Streptococcus gordonii str. Challis substr. CH1]
gi|157075448|gb|ABV10131.1| membrane protein [Streptococcus gordonii str. Challis substr. CH1]
Length = 303
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 102/300 (34%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GT++ A WG++ Q+L S L + + R+L + + + YF+
Sbjct: 2 SKTVRGTIYTLVAGTAWGLSGTSGQYLMVHGFSALSLTNFRLLVAGLAL-MGMAYFTDPK 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + V + VF+ L ++ ++ A+ + ++ PV + +
Sbjct: 61 SFGEIWKDKQSLVMIFVFALFGLFLNQYAYLEAIHETNAGTATVLQYLCPVGILAYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVG 191
K ++ + L I ++ H + LS+ + ++ + I +
Sbjct: 121 DKVAPTASEVCSIFLAIGGTFLIATHGQLNQLSMTPKGLLIGLFSAFTYSLYILLPIDLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + A + + L + F + +F G
Sbjct: 181 KKWGSMLVIGIGMTMAGILLFSFSGLIQHQWQFRLDILFALLGIIVIGTIFAYTVFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+++ + +++ A+++ L + K
Sbjct: 241 SLVGPVKSSLLASIEPISAVFFAFLIMQEHFYAFDFLGMAMILAAVMLISLKDLFIQRKK 300
>gi|329768186|ref|ZP_08259689.1| hypothetical protein HMPREF0428_01386 [Gemella haemolysans M341]
gi|328838033|gb|EGF87654.1| hypothetical protein HMPREF0428_01386 [Gemella haemolysans M341]
Length = 298
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 79/291 (27%), Gaps = 9/291 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFS--------GGL 78
L + I+WG+ ++ +V L V+ R + ++ + + L
Sbjct: 8 LLLIIVTIIWGLAFIWQNIASKVLGPLTVVGIRSIIAVVFLIVIALLVPSLYKSQAPKVL 67
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K+ G+ I + + Y
Sbjct: 68 AEAITKNKSWVLGGICGIVLFFAMYISQIGIGMTTAGKAGFITVLYICIVPFIGVFLGNK 127
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L + +++ + + + + + I+ F+
Sbjct: 128 LNKFFIIGLVLSVIGFYFLSVKEEFSLEMGDIIVLISAVLFGIHIIVIDYSAARVNSMFL 187
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + ++ + F F L L + + + G K T
Sbjct: 188 SIVQLGVVSILSLCLAAFKETIVFADIMSVIWPLLAIGVLSSGVGYTLQIVGQKDVPPHT 247
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ ++ + V IL + I I IV + ++V LP
Sbjct: 248 ASLILSLESVVAAIGGVLILGEHIGIREGIGMLIVFVGIIVSQLPDKKKDK 298
>gi|84625464|ref|YP_452836.1| hypothetical protein XOO_3807 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575072|ref|YP_001912001.1| drug/metabolite transporter superfamily protein [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|84369404|dbj|BAE70562.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519524|gb|ACD57469.1| drug/metabolite transporter superfamily protein [Xanthomonas oryzae
pv. oryzae PXO99A]
Length = 291
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 97/292 (33%), Gaps = 4/292 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G + F Y + I+ + + LE + + VL+ + V F
Sbjct: 2 LKGVVLGFACYAAYSISDAFVKLLEGTLPV----YEVLFLGALLMLLAVPFLKKPDDQLR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + A A+ + A T F+ P+ L +FLKE +
Sbjct: 58 ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEDV 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + A ++ + +LI+ L +A A I + + + +
Sbjct: 118 HWRRWSAVIVGFIGVLIVLRPGFRHLTQGHVAAIVCGLVGAISVIALRMAGHGEKRLTLY 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ G F + L GYGLL Y + + +S V +
Sbjct: 178 GAGVIGPLIMGGIMMLPTFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMSPVSLVAPTQ 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y+ L I + +D + +++ A + L+ S + K
Sbjct: 238 YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTK 289
>gi|322805032|emb|CBZ02592.1| transporter, EamA family [Clostridium botulinum H04402 065]
Length = 293
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 99/285 (34%), Gaps = 12/285 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ G L+ + + S E+ R + V + +S
Sbjct: 9 LLSMLIVGSIGLFVRSI-PFSSAEIALVRGILGCAFVLVFSLMSGQKISGKNI----KAN 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S L+V+W A + Y+ PV+ + L + LKE L+ L+++
Sbjct: 64 LWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLC 123
Query: 151 ALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ L + + + + + +G + L
Sbjct: 124 IVAALVGLTCIAGVSKKAGANDFVGILYGLGSAVLYATVIFLNKCLKDIKGIESSIVQLG 183
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ + + S G + P L LI + V+ ++ ++ +V +
Sbjct: 184 VSAISLLAYVLMSEGFKLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVAALS 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P++ I+ + L + + V+ I +++ A +
Sbjct: 244 YIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKK 288
>gi|229077240|ref|ZP_04209934.1| hypothetical protein bcere0024_58870 [Bacillus cereus Rock4-18]
gi|228706071|gb|EEL58366.1| hypothetical protein bcere0024_58870 [Bacillus cereus Rock4-18]
Length = 302
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 81/279 (29%), Gaps = 6/279 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ ++WG + + + L + L V R + + I +F +
Sbjct: 6 YFALIMLSLIWGGSFYFFKILVTDFNPLVVAFLRSTFGAITLIALIPFFRKSFRGNISFI 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF--LGSVFLKERL 143
+ L + + L T + + I +F + L
Sbjct: 66 PLFAVGILNTLIPWTLICFSEQKMTSNLASVLNATQPLWTMVLGILLFGIHSNRNQIIGL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +L + L + + +++ IA + F I + L
Sbjct: 126 FIGFVGILILSDIHLSNVFSVDSLNFVAMLIATFCYGLATHITKRYLKEMSMFQISLGTL 185
Query: 204 AIPALF---YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ ++ V++ + + + + ++ Y I++ +
Sbjct: 186 LVGSICSGGIVLFLEEPIQILTKISWHHIGALIGIGTFGSGIAYLLYFYLIQKGNPNFAS 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I Y P+ I +L + I I ++I + +
Sbjct: 246 ISTYLVPVSAIFWGYILLNENISWRLIIGLVFILIGVYI 284
>gi|15612953|ref|NP_241256.1| hypothetical protein BH0390 [Bacillus halodurans C-125]
gi|10173003|dbj|BAB04109.1| BH0390 [Bacillus halodurans C-125]
Length = 311
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/294 (14%), Positives = 98/294 (33%), Gaps = 19/294 (6%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVIS-HRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A ++ G + + + L + + + S R L + + ++ T
Sbjct: 11 IMFAMVIVGSSVVAGKMLVESFPVFLASELRFLIAALILVPMLL-----KKEGIPTFSKK 65
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + + + + + F +Y L+ P + + + LKE+L L I
Sbjct: 66 EVGILFLQALSGVFLFSIFMLYGLMYTTAMEGGIIMSTLPAVVALMAFITLKEKLTRLTI 125
Query: 149 IAALLIILSLLIMTLHS-------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
I LL + L + G L+ A+ F + S
Sbjct: 126 IGILLAVGGTLAINTSGTLSDVERGVAPLLGNLLIIGAVISEALFIIFGKSISQRVSPLA 185
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V + + + + ++ F + GI++
Sbjct: 186 ISTMVSVFGVVLFLPFAIYEATRFPLTDVSLNDWLIIFYFGVVVTVIAFVLMYQGIEKVP 245
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
STVG++ P+ ++ S ILK+ T G+V+ A+++ + + +
Sbjct: 246 ASTVGVLTGVLPISAVLLSALILKESFSTFHVAGMGLVLAAILLISIDSNVEKK 299
>gi|333023863|ref|ZP_08451927.1| hypothetical protein STTU_1366 [Streptomyces sp. Tu6071]
gi|332743715|gb|EGJ74156.1| hypothetical protein STTU_1366 [Streptomyces sp. Tu6071]
Length = 313
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/270 (9%), Positives = 71/270 (26%), Gaps = 3/270 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + L + V VL V+ R ++ + ++
Sbjct: 11 LVLVALVWGSSYLVAKSATDVLPVLAVLFARYALGALACGAVVLVRRRAW--TRTEVRAG 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+G+ + +L + A + + +
Sbjct: 69 ALLGVTQAAVLVLETYGVAHTSAAHAGLLISLTIVLTPPLDRTRPPLPARFYAAALLCVV 128
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L+ G L+ A V + + + + +
Sbjct: 129 AVGLIGAGGEGFGLPRGGDLLMLGAAVVRAGHVALVGRVTARHRVDPVHLTTVQMVTGTV 188
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + G + L L F F ++ ++R S ++ T P+
Sbjct: 189 LVLPFAVRHFGALAASDAATGSRLLYLALLCGLFAFLAQTWAVQRTSASRASLLLGTEPV 248
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + + + + + ++++
Sbjct: 249 WAVATGLVVGGEHLTPWAATGAALLLVGTY 278
>gi|296110254|ref|YP_003620635.1| transport protein [Leuconostoc kimchii IMSNU 11154]
gi|295831785|gb|ADG39666.1| transport protein [Leuconostoc kimchii IMSNU 11154]
Length = 306
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 96/294 (32%), Gaps = 12/294 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G L F + LW ++ + + L ++V +++ R+L S G+ +
Sbjct: 5 KRKPGLGLLLAFLSPFLWSVSGIVAEDLFLHAGITVNWLVTLRMLIS--GLLILLYASIK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +++F+ + F A+ T + ++ P++ + S
Sbjct: 63 HQKIFAIFKNFKDCFQLIIFTVFGMTALQFTFFKAVDTGNAATATVLQYLAPILIILFLS 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIP 189
+ ++ N I+ +L IL +++ L++ + + +
Sbjct: 123 LINQKLPNRADTISVILAILGTVLIVTQGHFNSLNVPLIAVFWGVMVAFSDVVYTLLPHK 182
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ G + + + + G L I I F + +
Sbjct: 183 LIGKYGALTIVGWSMLTGGLIMNFLFQPWGSSPKLNTIIVIELFIVIVFGTMFAYLFYLQ 242
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ +TV ++ PL + SV L + + F +V+ +
Sbjct: 243 SLQYIDPTTVSVLGAVEPLSSAILSVLFLNISFNATGILGFILVIGVTFLQYWS 296
>gi|288960156|ref|YP_003450496.1| hypothetical protein AZL_a04210 [Azospirillum sp. B510]
gi|288912464|dbj|BAI73952.1| hypothetical protein AZL_a04210 [Azospirillum sp. B510]
Length = 305
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 87/282 (30%), Gaps = 6/282 (2%)
Query: 31 FCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
A +L+ + L V +++ R L + V + + GG + ++
Sbjct: 26 LVAIVLFAAMDTLIKVLTAGYPVPQLMFVRSLVAFLLVGGYTLAWGGGFAAMRTR----- 80
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V+ A + G F YA F P+ L + L E + +
Sbjct: 81 RPLGHVWRAFAGLISMGCFFYAFRELPLADVYVLSFAGPLFITALSAPLLGEPVGWRRWA 140
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
A ++ +++M S L + +A +A + V ++ L
Sbjct: 141 AVVVGFGGVVVMAQPSAGAPLVPVLVGLTAALFYALAALAVRGLSRTETSASIVLYLLLT 200
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
V +G + + G L + + + +RA + V EYT +
Sbjct: 201 TTVVSGALAVPVWTTPTAAGLGLMALVGALGALAQVLLTQAFRRAPPAVVAPFEYTGMVW 260
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + +++ + + L + + +
Sbjct: 261 ASLFGWMVFGDLPTAPVLAGAMVIIGSGLYILHRETMVARRR 302
>gi|229011100|ref|ZP_04168294.1| Transporter, drug/metabolite exporter [Bacillus mycoides DSM 2048]
gi|228750272|gb|EEM00104.1| Transporter, drug/metabolite exporter [Bacillus mycoides DSM 2048]
Length = 321
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 96/297 (32%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 4 NRLKGIIMVIIGACLWGLSGTAAQQLFQYENVSTEWLVTIRLLISGAILLIMSSFGANKK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A +++F + + ++ + + ++ P+
Sbjct: 64 EIFGIWKQKSDANKIILFGLLGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 124 WSVRPSKIDYISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSKELL 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + S E L + + +F
Sbjct: 184 EKWSSSVIVGWGMIIGGIGVTILHFISTNEFILLSTMKYVKLSTLPLITFVVIFGTLIAF 243
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 244 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILS 300
>gi|329941492|ref|ZP_08290757.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329299209|gb|EGG43109.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 346
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/293 (8%), Positives = 75/293 (25%), Gaps = 30/293 (10%)
Query: 29 FVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +G + + + L + L V+ RV + + V +
Sbjct: 19 LALGSALAFGGSGVAAKPLIEAGLEPLHVVWLRVAGAAVVMLPVAVRHRALVRDRPAL-- 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L ++ +A + A+ + ++ P + + + ++
Sbjct: 77 ------LLGYALLAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRPVSRS 130
Query: 147 QIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ +L L + L G + + A +
Sbjct: 131 AAVGVVLAAGGLACVVEVWSGLAFDALGLVLALGAACCQVGYFILSDHGGDAAEGRAPDP 190
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP------DTLFLIGYGLLNSFVFCI 246
+ A+ G + L + +
Sbjct: 191 LGVIAYGLLGGALVLTLLARPWGMDWSVLGGDTAMNGTRVPAVLLLGWIVLIATVLAYAT 250
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R G++ ++ V + +L + + + + +V+ V
Sbjct: 251 GVLAVRRLSPQVAGVVACLEAVIATVLAWVLLGEHLSAPQVVGGAVVLAGAYV 303
>gi|319935106|ref|ZP_08009547.1| integral membrane protein domain-containing protein [Coprobacillus
sp. 29_1]
gi|319810001|gb|EFW06378.1| integral membrane protein domain-containing protein [Coprobacillus
sp. 29_1]
Length = 302
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 87/292 (29%), Gaps = 17/292 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G F +WG T + T+ L +S +E++ R L ++
Sbjct: 1 MKNKITFGHCAAFITIFIWGTTFISTKVLLNILSPIEILFIRFLIGYIILWCI------Y 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L T K + M I + I T + +F
Sbjct: 55 PHHLHLTHKKEELYFMAAGLCGITFYYLFENIALTYTLASNVGVIISIAPFFTVIFACLF 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI----------PLLSLAIAVTWSAYCFARKT 187
+E+ + I ++ ++ + +++ +++ I +S
Sbjct: 115 LHEEKPHIRFFIGFIIAMIGIYLISFSGSQLQLNPLGDFLAIIAAIIWAGYSILIKRLSG 174
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + L + GF + I L ++ F +
Sbjct: 175 FGYHIIQTTRRTFFYGLLFMLPFTFIMGFDVDISQIVMPIHLFNLLFLGIGASALCFVTW 234
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +K + Y P++ V+S FIL + + + + ++ +++
Sbjct: 235 NLAVKILGSVKTSVYIYIVPVITAVTSTFILHEKMTLTTLLGIILTLVGLLL 286
>gi|56479169|ref|YP_160758.1| hypothetical protein ebA6529 [Aromatoleum aromaticum EbN1]
gi|56315212|emb|CAI09857.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 297
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 73/288 (25%), Gaps = 17/288 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A + W + + L E V + + R + + T
Sbjct: 9 YLLLTLASLFWAGNMVIGRGLREAVPPMTLAFWRWTIAFALTLPFALPHLRAQWPRMKTH 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
V + AL + TPV ++ L + L +RL
Sbjct: 69 WRAIVVLGFIGVGCYNTFA----YIALQYTTATSATLLNSFTPVATIALAFLLLGKRLTR 124
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L+ ++ ++ ++I+ G + LA+ +
Sbjct: 125 LEAAGVVVSLVGVMIIVARGSLATLLGFSLNTGDLWMLLAVLTWGIYTVGLQWRPAGIEP 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + L + + G L + F+ G+
Sbjct: 185 MLLLAAFTAVGVAGLAPLYAWEIASGTLIDPSPATFAGILYIGIFPGFLGYVFFNAGVAA 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + + P+ + + L + +V + +
Sbjct: 245 VGPSRASLFIHLMPVFTALLAAIFLGERPQPFHFAGIALVFAGIFLTT 292
Score = 39.1 bits (89), Expect = 0.92, Method: Composition-based stats.
Identities = 6/131 (4%), Positives = 35/131 (26%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+A + A + + I + + + +
Sbjct: 14 LASLFWAGNMVIGRGLREAVPPMTLAFWRWTIAFALTLPFALPHLRAQWPRMKTHWRAIV 73
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + ++ ++ ++ P+ I + +L + + + +
Sbjct: 74 VLGFIGVGCYNTFAYIALQYTTATSATLLNSFTPVATIALAFLLLGKRLTRLEAAGVVVS 133
Query: 294 VIAMVVYLLPT 304
++ +++ +
Sbjct: 134 LVGVMIIVARG 144
>gi|315222437|ref|ZP_07864338.1| integral membrane protein DUF6 [Streptococcus anginosus F0211]
gi|315188461|gb|EFU22175.1| integral membrane protein DUF6 [Streptococcus anginosus F0211]
Length = 303
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 99/300 (33%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
GT+ A I WG++ Q+L VL + + R+L + + +V +
Sbjct: 2 SKIAKGTILTLVAGIAWGLSGTSGQYLMTHGFPVLVLTNIRLLIAGFLLVLYMVLTNR-R 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L++ + + +F+ L ++ ++ ++ + +V PV + +
Sbjct: 61 KLVEMLKDQKAMMSLTLFALLGLLLNQFAYLKSIYESNAGTATVLQYVCPVGILAYTCLK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVG 191
++++ +L + ++ H L + ++ + I +
Sbjct: 121 DCVAPTVTEVLSMILAVGGTFLIATHGQFNQLSVTPTGLFWGLFAAFTYALYILIPIQLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + V + A + H+ L + + + +F G
Sbjct: 181 KMWGSISVIGVGMMLAGIVLTPFSGISHFHWQLSTEVYLALVGIILVGTIIAYTLFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+ + + + +++ A+ + + +I +
Sbjct: 241 SLVGPVKSSLLAAVEPISAVFFAFLIMHEQFYFLDFVGMFMILSAVALISIKDLILEKRK 300
>gi|291521024|emb|CBK79317.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Coprococcus catus GD/7]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 89/285 (31%), Gaps = 13/285 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG + L + L+ + +I+ R + V +
Sbjct: 14 MLALVAMAWGSSYLLMKIGLDGIPPFCIIALRFGIAFIAVSLLFFKKFKKTTKR------ 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ L + F ++ L T F T V+ +V K+ +H
Sbjct: 68 --VMMKGAVLGLFLFGLFAFLMHGLQTTSASNGGFLTSTTVVLVPLFHAVIKKKMPDHQN 125
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----GFFIEMCVL 203
+++ LL + + ++TL + S I A +A + + G + + L
Sbjct: 126 VLSILLTMTGICLLTLQQSLVFHSGDILCLAGAAVYAVQILLTDKFAQEEDGMLLGIWQL 185
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL+ V+ + L + ++F F + K G++
Sbjct: 186 GFAALYGVICTFMFETPTLPSSSSQWIAILGLAFVCSAFGFVMQPMAQKYTTPEHTGLLF 245
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+ V S L + + + +V+ +V +
Sbjct: 246 ALEPVFSAVFSYIFLHETLSGKGYMGAMLVMAGVVAASVVRKKRQ 290
>gi|188585896|ref|YP_001917441.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179350583|gb|ACB84853.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 284
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 81/284 (28%), Gaps = 3/284 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A + + +P++T+ ++S +V R+ ++ G L
Sbjct: 1 MNINKGIILAIIATLFFSTSPIFTRLATELSPSQVAFARMFGGSLF---IAIFLKSGTKL 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + + V +A + Y + + + + V+ G
Sbjct: 58 LISESFKLRYLIYGVITAFHFLFYIWSLYYTSIAHSLVIIHTAPVYVYLYEVYKGHKPTM 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L IL + S I L ++ V+ + G +
Sbjct: 118 SEAIGTILALLGLGILLGFQPYVDSTIILGNVMAFVSALCLAIYSLIGRREKNRGPLLPY 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V+ + + + + I++ +++ +
Sbjct: 178 TFWLYFISSLVLLPAAAADFQVAFSFKEISALIGLALFPTALGHTIYNASLRQIRSFYPS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ I+ + L + I I + ++V + +
Sbjct: 238 IIATQEVTGGILLGIVFLSEIPTIQTIIGALISLAGIIVIVYKS 281
>gi|329956341|ref|ZP_08296938.1| putative membrane protein [Bacteroides clarus YIT 12056]
gi|328524238|gb|EGF51308.1| putative membrane protein [Bacteroides clarus YIT 12056]
Length = 288
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 86/288 (29%), Gaps = 4/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ PL+T + + ++ +R L+++ + ++
Sbjct: 1 MNKVNGFLYGLLSSASFGLIPLFTIPAMQQGMGFWSILLYRFLFAMLALAGILLLDKQSF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + L S+ + F+ + + ++ F
Sbjct: 61 RIRRKEILPLLLLACLYDSSAVFLFWGYQFMSSGVATTLHFMYPVLTTLIMMIFFHEKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC--FARKTIPVGSSEGF 196
L +A + + +G+ + + ++ A + +
Sbjct: 121 LWRMAAIALAVAGVFFLSGGDSTGSVTGLGIFIVLLSALGYALYLVTVSQLKNLEMKGLK 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L L ++ G ++ + IK
Sbjct: 181 MTFYVFLFGGILLFIGTEASGIGLQAIPDRTTLGNLVMLALVPTVISNLALVRAIKNIGS 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ P+ + + I +P+ + +++ A+ V +L
Sbjct: 241 TLTSVLGAMEPVTAVCVGITIFGEPLTRSIALGILLIISAVTVIILKR 288
>gi|322785067|gb|EFZ11813.1| hypothetical protein SINV_14964 [Solenopsis invicta]
Length = 475
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 88/303 (29%), Gaps = 26/303 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + + L +++ E+ R + L ++Y
Sbjct: 166 LGLVLATLSSLFFSLCSVIVKSLVEINPTEMALFRFVGVLLPAIPIVIYKGQH------- 218
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+L+ + I YA S F PV +FLKE
Sbjct: 219 PFPKGRRLILILRSFIGTTGLMLSFYAFRHMPLADASVIVFSVPVFVAIFARIFLKEPCG 278
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--------- 195
++ L ++ ++++T I ++ ++
Sbjct: 279 LFNVVTICLTLIGVVLITRPPLIFGHTVESLSDGHIKPKNADLWGAIAAFSATLFGANAY 338
Query: 196 ----------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
F I M + AL ++ G D L +I L +
Sbjct: 339 VLLRALKGLHFSIIMTNFGLFALIQTTLVSWAIGTLCMPHCGTDRLLVIALALFSFAGQI 398
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + ++ + V I T + V + + +V ++++ L
Sbjct: 399 LLTLALQMEQAGPVAIARSTDIVFAFFWQVLFFNEIPNRYSIGGAILVTSSVLLTGLRKW 458
Query: 306 INS 308
I S
Sbjct: 459 ILS 461
>gi|298243820|ref|ZP_06967627.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297556874|gb|EFH90738.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 311
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 88/294 (29%), Gaps = 4/294 (1%)
Query: 15 SKENASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ S +G A YI+WG T L + +E + R + + ++ +
Sbjct: 20 TAPALSSRERLGVGLALVALYIIWGSTYLGMRIAIESFPPFLMAGIRFICAGLLLYAFLR 79
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K +++ + + ++ + Y I
Sbjct: 80 LRGHAAPTGKQWGGATIIGVLMLVCSNGMVSFAEQWVATGIVAIALAAVPLYSAL--IFG 137
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
LG + L + +I+L+L + L+L IA + A + +
Sbjct: 138 LLGRWPSRFEWLGLGLGFVGVIMLNLEHGLWTNPQGALALLIAPFCWSLGSALSSRFPMA 197
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S +L ++ G + L + + + + Y ++
Sbjct: 198 SGLMASATQMLGGGVALLLLGVGLGEHISGWPSTRSWLAMLYLVLIGSLVGYTAYGYLLR 257
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
R + + Y P++ + + + I V I I++ + + L
Sbjct: 258 RVRPALATSYAYVNPIVAVGLGALMAGEQIAPVGIIAMLIILTGVALVSLRKRR 311
>gi|260582977|ref|ZP_05850760.1| triosephosphate isomerase [Haemophilus influenzae NT127]
gi|260093961|gb|EEW77866.1| triosephosphate isomerase [Haemophilus influenzae NT127]
Length = 292
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 60/289 (20%), Positives = 123/289 (42%), Gaps = 8/289 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A L+G ++ L+ +S ++ +R++++ P V ++ F + L
Sbjct: 3 KGILVSLLASFLFGYMYYFSTLLKPLSGTDIFGYRMIFTFPFVLLSVTLFKQKAALIERL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K K P + ++ F++A SF Y + P++ V G VF KE
Sbjct: 63 KRIQKRPHLALSYLLCGLLMGFQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRVFFKE 122
Query: 142 RLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R++ + IA ++ L ++ + L G+ S+ I + ++AY RK + F +EM
Sbjct: 123 RISTFKFIAVIIATLGVISNIVLKGGLSWESIVICLGYTAYFSIRKALKNTDLASFCLEM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++++ + N L+ GL++ + ++ +G
Sbjct: 183 LSLMPVSIYFA---LQTDFATVQQTNPFIWGLLVLLGLISGTALIAYVIASNMLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ Y ++M+ S I + ID+ +F +VIAM++ ++ V
Sbjct: 240 LLGYVETIMMLCVSFLI-GEQIDSESYPLFICLVIAMILVMVDGVYKQH 287
>gi|317053506|ref|YP_004118640.1| hypothetical protein Pat9b_4749 [Pantoea sp. At-9b]
gi|316952611|gb|ADU72084.1| protein of unknown function DUF6 transmembrane [Pantoea sp. At-9b]
Length = 310
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 81/281 (28%), Gaps = 13/281 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ILWG + T+ +S E+ R + + ++ + ++
Sbjct: 3 YIFPLLAAILWGANIVITKMASGLISPNEISFLRWFLATIVLTPFVI----RPLITHASI 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + YA + P++++ L S+ +
Sbjct: 59 LRQNLGKIFILGVLGGVIFQCLAYYAAAYTSAMNMGIIQALMPLMAIILASMLFRTMPGM 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ A++ + +LI+ G+ L + + A + E
Sbjct: 119 NTVAGAVISLAGVLIVISGGHISQLISHGLNLGDGMMLLGAFAMAVYNVLLKRWHIEVPL 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L A V+ + E L + L + + G +R S
Sbjct: 179 SVSLYLQAVAACIVLLPVYLLSEKHALTMATSGMVLYSAIGASVLAPLTWMAGSRRLGPS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
V + P+ + + L + + + ++
Sbjct: 239 RVSLFFNLIPVFTAIMAAVFLSEKFTWSLISGGVLALGGVI 279
>gi|28379703|ref|NP_786595.1| transport protein [Lactobacillus plantarum WCFS1]
gi|254557858|ref|YP_003064275.1| transport protein [Lactobacillus plantarum JDM1]
gi|308181938|ref|YP_003926066.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
gi|28272543|emb|CAD65468.1| transport protein [Lactobacillus plantarum WCFS1]
gi|254046785|gb|ACT63578.1| transport protein [Lactobacillus plantarum JDM1]
gi|308047429|gb|ADN99972.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 302
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 99/292 (33%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ M G ++ A LWG++ QF+ Q + +S R L S + AI +
Sbjct: 2 TTNRYMKGIMWAMLASTLWGVSGTVMQFVSQNQAIPADWFLSVRTL-SAGIILLAIGFVQ 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + K ++ ++ L + F ++ + +++P+ V
Sbjct: 61 QGTKIFKVFRSWASVGQLVAYATVGLMANMYTFYISIERGTAAAATILQYLSPLFIVLGT 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTI 188
+F +E +IA + +L + + + L I +A +
Sbjct: 121 LLFKRELPLRTDLIAFAVSLLGVFLAITKGNIHELAIPMDALVWGILSGVTAALYVVLPR 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + A + T + F F
Sbjct: 181 KIVAENSPVVILGWGTLIAGILFNLYHPIWIGAPKITPTLVTSIGAIVLIGTIFAFLSLL 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ ++ A + V I++ P++ V S+ L + V + +V++A+ +
Sbjct: 241 HSLQYAPSAVVSIVDAVQPVVTFVLSIIFLGLQVTWVEILGSLLVIVAIYIL 292
>gi|85705912|ref|ZP_01037008.1| integral membrane protein [Roseovarius sp. 217]
gi|85669500|gb|EAQ24365.1| integral membrane protein [Roseovarius sp. 217]
Length = 323
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/314 (13%), Positives = 97/314 (30%), Gaps = 25/314 (7%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIV 72
+ ++G + A + + + + +FL L +V+ R L + ++
Sbjct: 2 TTAITIQRSNLIGAAYALAAVLCFSLNDVGIKFLSDSYALHQVVFIRALVGMAAFVAFVM 61
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F+GGL+LL+ + + L +FV+P++
Sbjct: 62 PFAGGLALLRTRRPRMHLLR-----GLCVVSANTCLFLGLAAMPIADAVAVFFVSPLVIT 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+FL+E + + A + ++++ ++ +A+ +A I
Sbjct: 117 VFSVLFLQETVGTRRWAAIGVGFFGVMVIVKPGTAAFQLASLLPVAAAFLYAVMHILARK 176
Query: 193 SEGFFIEMCVLAIPALFYV-------------------VWNGFSGGEHFFLGNIPDTLFL 233
G + L +V + + + D L
Sbjct: 177 IGGTESAPTMAFYIQLTFVIASSLIGLSLGDGRFAGMGHPSLEFLFRAWIWPDPGDWPIL 236
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
I G+ S + ++ + EY A + I+ V + D I ++
Sbjct: 237 IMLGISGMLGGLFISQAYRLSEAAFAAPFEYVAMPMAIMWGVTVFGTWPDATAWIGIALI 296
Query: 294 VIAMVVYLLPTVIN 307
V + + L +
Sbjct: 297 VGSGLYLLWRESVK 310
>gi|328948647|ref|YP_004365984.1| hypothetical protein Tresu_1796 [Treponema succinifaciens DSM 2489]
gi|328448971|gb|AEB14687.1| protein of unknown function DUF6 transmembrane [Treponema
succinifaciens DSM 2489]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/296 (10%), Positives = 83/296 (28%), Gaps = 4/296 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G ++ + + + L + + ++ R L + F + +
Sbjct: 4 QENLKLGVCWILFSAFGFAVMGLCVRLAGNLPFVQKTLFRNLIAFFVAFSTLYMKAKKDK 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +L + L + YAL + ++P +V L
Sbjct: 64 SVFYVPREAWKFLLLRLAVGSLGIFGN--FYALGFMNISDAAMLNKMSPFFAVIASIFIL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ N + + +++ L + + + + A +
Sbjct: 122 GKKPNFVSAFSLIVVFTGSLFVIKPTFDFVKVFPALFAFVGGMGAGFASCFVRKLHSYNV 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL--NSFVFCIFSYGIKRAKLS 257
I FF ++ LI + + A S
Sbjct: 182 CGDFIIVFFSLFSSLLAVPFVFFFHASMSLPQVLILLCAGLGAACGQFGMTNAYFNAPAS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ I +Y+ + + L Q D + I++ ++ + N+ K ++
Sbjct: 242 KISIYDYSNIVFAGILGFVFLDQVPDIFSVAGYFIIIGTAILVFIYNSKNAAKRQS 297
>gi|307111346|gb|EFN59580.1| hypothetical protein CHLNCDRAFT_132944 [Chlorella variabilis]
Length = 388
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/296 (8%), Positives = 83/296 (28%), Gaps = 17/296 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + + + + ++ + V E+I R L++ +
Sbjct: 69 GVACGVVSSLSFTLASTLVKLVQHAIPVFEIILCRALFAGVTTVL------SCRAKGLPI 122
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + + A +++ ++ +F++P + LG + L E+
Sbjct: 123 FGSTAPLPIKLARGIVGATAMICCYESIVRLPLSDSTVIFFLSPAFTAILGYLLLGEKFG 182
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTIPVGSSE 194
L + ++++ + +A +
Sbjct: 183 WLTAAGCSASLGGVVMVAQPGSAAVDWSRQRLLGMVFGFAGAVLAAGAYICIRQIGKREH 242
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I M L VV + L + + L+ + + + +
Sbjct: 243 PLTIAMYFHTFSFLGSVVPLCLGYPQPAVLPSPVQAVLLLLLAACSFTANLLVNRAFQIE 302
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + ++ + P+ + + ++ ++V L + +
Sbjct: 303 LAAKASAVNFSQVIFAWTIGTVFFDDPLTVLSVVGTCLIATGVIVVNLDKMGQKHQ 358
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 22/71 (30%)
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I R LS ++ + +P + +L + + + +V+ P
Sbjct: 143 MICCYESIVRLPLSDSTVIFFLSPAFTAILGYLLLGEKFGWLTAAGCSASLGGVVMVAQP 202
Query: 304 TVINSGKNKTK 314
++ +
Sbjct: 203 GSAAVDWSRQR 213
>gi|228951073|ref|ZP_04113191.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228808590|gb|EEM55091.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 308
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 100/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ L+ + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHLRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITVYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 183 ECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIVSGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLNEAFGAYQLLGGVCIVLSVIFLTMPQ 296
>gi|149019390|ref|ZP_01834752.1| hypothetical protein CGSSp23BS72_05535 [Streptococcus pneumoniae
SP23-BS72]
gi|147931260|gb|EDK82239.1| hypothetical protein CGSSp23BS72_05535 [Streptococcus pneumoniae
SP23-BS72]
Length = 298
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ K + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDK-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + I +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFIGMAMILFAVTLISLKDLFLEK 298
>gi|153208177|ref|ZP_01946605.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706415|ref|YP_001425212.1| transporter, drug/metabolite exporter family [Coxiella burnetii
Dugway 5J108-111]
gi|165918629|ref|ZP_02218715.1| putative membrane protein [Coxiella burnetii RSA 334]
gi|212218045|ref|YP_002304832.1| transporter, drug/metabolite exporter family [Coxiella burnetii
CbuK_Q154]
gi|120576190|gb|EAX32814.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|154355701|gb|ABS77163.1| transporter, drug/metabolite exporter family [Coxiella burnetii
Dugway 5J108-111]
gi|165917657|gb|EDR36261.1| putative membrane protein [Coxiella burnetii RSA 334]
gi|212012307|gb|ACJ19687.1| transporter, drug/metabolite exporter family [Coxiella burnetii
CbuK_Q154]
Length = 304
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 95/289 (32%), Gaps = 9/289 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S + G + A ++ G+ + + L+ + + +++ R + + S
Sbjct: 4 SKKSWQGYSLLLLAQLMVGVGIVGCKSLLQTIPAVIILAIRFTIGSTFLLLVHLAVSDQK 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L ++ + A + L + P I V +F
Sbjct: 64 FRPLKQLTRLDWGFIISQALCAGAFFNILLLLGLKYTNANVAGIITSALPAIVVIFSIIF 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIPV 190
LKER+ ++ ++ L+I+ HS I A + +
Sbjct: 124 LKERVTISTLLCVGFAVIGLIIIKFHSLQFGSRYQIYGDILILASLIPEATYYILSKLRP 183
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
F + + I L ++++ + L G+ ++ + + G
Sbjct: 184 NKLPVFLVSALMNGINVLPFLLFLFLRHQSLLMQIAPEQYILLFIVGISSALFYVFWFSG 243
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S+ G++ P+ ++ + L + I + + G+V++++V
Sbjct: 244 CNHVSSSSAGLITAFMPIATLIIAYLFLGEKITVFQLLGLGLVILSIVF 292
>gi|67527043|gb|AAY68312.1| hypothetical protein [uncultured marine bacterium 66A03]
Length = 295
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 3/280 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L ++WG+ PLY L + + +E+++ RV W+ F V L
Sbjct: 2 NKALYGYLSATSGALIWGVVPLYYNLLYKYAFIEIVAQRVFWASLIYIFLFVIQKRLL-E 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+KD L + K + + + A +++ +W FFI+A+ Q ++ Y++ P+++ LG FL
Sbjct: 61 IKDALSSLKNIILFLVCALLISANWLFFIFAIHNGQLMQSALGYYIYPLLTATLGYFFLG 120
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL IA ++++ + + S P +++++A+T++AY RK +PV S G IE
Sbjct: 121 ERLEKTTKIAFFFAVIAVFLKGSTISNFPWIAISMAMTFAAYAIIRKQLPVKSDTGLMIE 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L AL Y W G FF G I + I GL +F G K L+
Sbjct: 181 TTLLMPIALLYFSWQSRVGTPLFFGGEIIGLILAIFCGLFTIIPLYLFHNGNKALPLAVA 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G++ Y P ++ S+ L + + VFG++ I ++V
Sbjct: 241 GLIFYLNPTSQMIISIL-LGEDFSLMDIFVFGLIWIGLIV 279
>gi|299533920|ref|ZP_07047283.1| hypothetical membrane protein [Comamonas testosteroni S44]
gi|298718090|gb|EFI59084.1| hypothetical membrane protein [Comamonas testosteroni S44]
Length = 326
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 88/294 (29%), Gaps = 14/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ++W + + ++ +S E+ R L + ++ +
Sbjct: 26 YLLPLGAVLIWSVNTVVSKLAADSISAAEIGFFRWLVAAVLFTPFVL----PSIWRQRAD 81
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P ++V + ++ YA +TP++ + L L + L H
Sbjct: 82 IKPLLPRIVVLGVLGMVIYQSLAYYAAHFTTATHMGIIGSLTPMLVLALAVFMLGQPLTH 141
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--------- 196
I +LL IL + ++ + L+ A F +
Sbjct: 142 GGIWGSLLAILGVALVVSSGRLSHLASEGLNLGDAMMFLAMLAYAVYNILLKRWPMPRLA 201
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+++ L + V + + L L + + ++ ++
Sbjct: 202 TVQLLYLQVLVAVVVQFPLYLFSPKTGLDASNLPLVGYAGIMASIAAPLLWMKAVQTLGP 261
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ + + F L +P+ + + + +++ L +
Sbjct: 262 GRSSMFFNLIPVFTALIAAFALNEPLAAYHAVGGIMTIAGLLLAELWKAPLRAR 315
>gi|268316833|ref|YP_003290552.1| hypothetical protein Rmar_1274 [Rhodothermus marinus DSM 4252]
gi|262334367|gb|ACY48164.1| protein of unknown function DUF6 transmembrane [Rhodothermus
marinus DSM 4252]
Length = 277
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 92/280 (32%), Gaps = 17/280 (6%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + ++ + L+ + + E++ R + +L + + +
Sbjct: 1 MIGSAFMFSLMGLFVKVAGRHLPSQEIVLIRSVVTLFYSYLLLRWQRVSWR--------G 52
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ G+L+ + V +AL T +PV + L +++LKE + +I
Sbjct: 53 QRTGLLILRGVVGFVSLSCLYFALTRLPLADTLVLQHTSPVFTTLLAALWLKEPIGRHEI 112
Query: 149 IAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
LL +L ++++ G+ L +A A+ + + TI
Sbjct: 113 AGILLSLLGMVLVARPGFLFGTHTAGLDPLGVAAAMGAAIFSAGAYTIVRELRRTEHPLT 172
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V P + + + + + + + G GL + G+ +
Sbjct: 173 IVFYFPLVSTIGSLPMALPTAVWPSPLDWLVVVAGVGLSAQIAQVWMTRGLAEEQAGRAV 232
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
M Y + + + ++ + + G++ +
Sbjct: 233 AMNYLQVVFGALWGLLFFREIPTPLSLLGMGLIFAGTGLV 272
Score = 36.8 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 51/131 (38%)
Query: 176 VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
+ SA+ F+ + V + ++ I ++ + ++ T LI
Sbjct: 1 MIGSAFMFSLMGLFVKVAGRHLPSQEIVLIRSVVTLFYSYLLLRWQRVSWRGQRTGLLIL 60
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
G++ + + R L+ ++++T+P+ + + LK+PI + ++
Sbjct: 61 RGVVGFVSLSCLYFALTRLPLADTLVLQHTSPVFTTLLAALWLKEPIGRHEIAGILLSLL 120
Query: 296 AMVVYLLPTVI 306
MV+ P +
Sbjct: 121 GMVLVARPGFL 131
>gi|221197090|ref|ZP_03570137.1| membrane protein [Burkholderia multivorans CGD2M]
gi|221203762|ref|ZP_03576780.1| membrane protein [Burkholderia multivorans CGD2]
gi|221175928|gb|EEE08357.1| membrane protein [Burkholderia multivorans CGD2]
gi|221183644|gb|EEE16044.1| membrane protein [Burkholderia multivorans CGD2M]
Length = 307
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 77/281 (27%), Gaps = 6/281 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L+ + R L + + + + + L ++P +
Sbjct: 21 IWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLNFNAASRAQLAAIRRDPALLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
V +LAV L + F V+ V L VF + R+ ALL
Sbjct: 81 VALGALLAVSISLQQIGLQYTRIANAGFI-SSLYVVIVPLMGVFARHRIGVGTWFGALLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ + A + + +
Sbjct: 140 AIGLYFLSIDEHFSALYGDWFQLAGAVIIAAHVMAVGHLAKRHDPLVLAFLQFVVCGALC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ + L G L + + + A + ++ +
Sbjct: 200 LAVGLAVEPVSVAMLRGALPTVLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V+ L + + + +++ ++ L ++ K
Sbjct: 260 AVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKK 300
>gi|20092059|ref|NP_618134.1| integral membrane protein [Methanosarcina acetivorans C2A]
gi|19917273|gb|AAM06614.1| integral membrane protein [Methanosarcina acetivorans C2A]
Length = 291
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 85/276 (30%), Gaps = 16/276 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
L + +LWG ++ + + S L+V++ RVL + + +++ L
Sbjct: 2 QKRAYLLIAAGAVLWGTIGIFVRGFYGFGFSPLQVVTLRVLSAAVLMLVYLLFTRPELLK 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ ++ + LA + + + + P L VF
Sbjct: 62 IRI----RDSLYFVGTGIFSLAFFNLCYFTTIRETSIAIAVTLLYTAPAFVAVLSRVFFG 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW----------SAYCFARKTIPV 190
E L ++ + L ++ + + SL ++ + A +
Sbjct: 118 ENLGVKKLFSLGLTLVGCAFVAGYLPGIGDSLTLSWSGLLTGLGAGFGYALYSIFGKAAL 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F F + +++ G
Sbjct: 178 EKYHTMTIAAYTFIFASLALLPLGNFENSAGAFSIGAFWVYLAGLGFFPTVLAYLLYTKG 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
++ + S I+ P++ ++ FI ++ + +
Sbjct: 238 LEEVESSRASIVATIEPVVGTLAGFFIFREILTGWQ 273
>gi|126174163|ref|YP_001050312.1| hypothetical protein Sbal_1938 [Shewanella baltica OS155]
gi|125997368|gb|ABN61443.1| protein of unknown function DUF6, transmembrane [Shewanella baltica
OS155]
Length = 309
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 18/310 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+S + +M LF +LW + + + +S + + R L + I+
Sbjct: 1 MSHLTITKDKLMICLFFIIPPLLWSSNFIVGRAIRNDLSPVMITFSRWLIA----LMVIL 56
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F+ + ++ + T + L PV +
Sbjct: 57 PFAHKYLKRDFHQYLQYPIRVIATAVTGVLSFSILVYSGLHHTSSTNALLLNSCVPVFIL 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTL-------------HSGIPLLSLAIAVTWS 179
+V K+ LN Q L + +L + + LL I+ +
Sbjct: 117 LFSAVVYKQPLNARQFFGLCLSFIGVLSIIFKGDLKGLLSLQLSQGDLLLLMAMISFAFY 176
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
R V I++ + + L +V+W +SGG N L
Sbjct: 177 TLWLKRIPYTVNRLGLLSIQIVITLLGTLPFVLWESYSGGSQQHWSNDIYLAVLFLGIGP 236
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + +FS ++ G + P+ ++ S+ L + I + ++ + +
Sbjct: 237 SFISYLLFSRCVEAIGAERAGFSIHLIPIFGVILSLLFLVESIHWFHMVGSATILFGVGL 296
Query: 300 YLLPTVINSG 309
+ + NS
Sbjct: 297 SSMQSERNSR 306
>gi|330503282|ref|YP_004380151.1| hypothetical protein MDS_2368 [Pseudomonas mendocina NK-01]
gi|328917568|gb|AEB58399.1| hypothetical protein MDS_2368 [Pseudomonas mendocina NK-01]
Length = 287
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/258 (13%), Positives = 88/258 (34%), Gaps = 7/258 (2%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
V+ V+ R L + ++ + ++ T
Sbjct: 36 ASVNNESVVFFRNLVGVLFFLPLLLVRG-------VRPLRTTRLKSHLWRTTYGLAAMYC 88
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
F YA+ + PV + + ++LKE L +I++L+ + +L++ S
Sbjct: 89 FFYAIAHLPLADAMLFTYSAPVFTPLIAHIWLKEPLTRRMLISSLIGLCGVLLVAKPSSA 148
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
A+ ++ A + + ++ +LF +++ + +
Sbjct: 149 LFEGPALFGLAASLLAAFAFVSIREMSDSEPATRIVFYFSLFSALFSAIPLSWSWQPLDA 208
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+L+G GLL + I S A +G + Y A + + + + + DT+
Sbjct: 209 NQLGWLLGIGLLATASQVIMSRAYGLAPPGLIGPVAYLAIVFAGLIAWLLWGETPDTLSL 268
Query: 288 IVFGIVVIAMVVYLLPTV 305
+ ++ A ++ +
Sbjct: 269 LGAALIFAASLLSVARRR 286
>gi|317484277|ref|ZP_07943201.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
gi|316924458|gb|EFV45620.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
Length = 298
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 94/301 (31%), Gaps = 16/301 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MG + +G+ PL+T L + VS V+ +R L + + +V
Sbjct: 1 MGFFLGLFSSATFGLIPLFTLPLIHDGVSPASVLFYRFLIASLTLGGVLVLRRE------ 54
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + L + + Y L + + F+ PV+ + L F E+
Sbjct: 55 RFHASAIDLCKLAGMSFMYTAAALLLFYGLNYMPSGVATTIQFLYPVMVMLLMIAFFHEQ 114
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA--------YCFARKTIPVGSSE 194
+ + + +L + + ++++ + V Y + +
Sbjct: 115 FSMITACSIVLAVAGVALLSIGGDSSRPVTLLGVGMMLLSGFCNALYITGIHVAGIRNMN 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G + VL A F +G + + + ++R
Sbjct: 175 GLVMTFYVLFFGAAFAFANAVGTGTFQPLSSWWEFMMAALLAVITAVLSNLTLVLAVQRI 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ PL + + + +P ++ ++ + +L + + + +
Sbjct: 235 GSTLTSVLGVMEPLTAVFVGILVFNEPFTPALVGGVILISSSVTLVMLGRQVQAIARRFQ 294
Query: 315 K 315
+
Sbjct: 295 R 295
>gi|312881363|ref|ZP_07741160.1| hypothetical protein VIBC2010_16134 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309371003|gb|EFP98458.1| hypothetical protein VIBC2010_16134 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 302
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 86/282 (30%), Gaps = 6/282 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + + WG + T+ L + +I + +S+ + V L
Sbjct: 20 LMLLLVAVFWGTSYGLTK-LALLQTSVLIFILIRFSITFLCMLPVMVRDFRRGLNKDWST 78
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
G+++ + V+ A S + + G +
Sbjct: 79 AIPSGLILSAIFFCEVYGVSQTTASNAAFLISLSVILTAFAEMIINKGKISKWLWGMSCC 138
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL---- 203
I +L++ + + + +A A + L
Sbjct: 139 SITGVLLLTGQSESSFSFNVGDSFILLAALLRAMMVTLTRRFSLGRSITTSTLTALQSLV 198
Query: 204 -AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
AI AL +V + + F F + +Y ++R + V ++
Sbjct: 199 VAIIALIFVTLYLPQNQILLPKNSEFWLIIAYLVVFCTLFAFYVQNYAVRRTSPTRVSLL 258
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ PL + + L++ + + + ++++++++ + +
Sbjct: 259 MGSEPLFGAIFAAIWLQEHLGFTQIVGGSLILLSVIITSIRS 300
>gi|310640495|ref|YP_003945253.1| transporter yded [Paenibacillus polymyxa SC2]
gi|309245445|gb|ADO55012.1| Uncharacterized transporter ydeD [Paenibacillus polymyxa SC2]
Length = 300
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 83/279 (29%), Gaps = 9/279 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G V I WGI+ + L Q+ V +++ R+L + +
Sbjct: 3 KSTRRTGLFLVITGAIFWGISGTVAKKLFLQIDVNWLVTTRLLIAGVLLLALQFTIKDRT 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A ++V+ + ++ ++ + + + ++ PV+ + +
Sbjct: 63 QIWGVWKNRKTAFQLIVYGLVGMLAVQYTYMASIQSGNAAVATLLQYLAPVMIIIYLVLR 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
+ A L ++ + + I ++ ++ A+ +
Sbjct: 123 KHLVFTRKDLSAIFLALVGCFFLLTNGSISQLSVPKIAIVWGLLSAIALAFYTLYAIPLL 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ I + I + + + L F +
Sbjct: 183 KQYDSLVIVGWAMVIGGFGLSLIHPPWQIDFKSLTLETYLYLAFVIIFGTMIAFWFYIES 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
++ + PL ++++VF LK+P + I
Sbjct: 243 LQSLSPKETSFLSSLEPLAAVLTTVFWLKEPFGFFQWIG 281
>gi|298292950|ref|YP_003694889.1| hypothetical protein Snov_2994 [Starkeya novella DSM 506]
gi|296929461|gb|ADH90270.1| protein of unknown function DUF6 transmembrane [Starkeya novella
DSM 506]
Length = 305
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 83/293 (28%), Gaps = 16/293 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + V + R W L + + + L
Sbjct: 10 YLLLTLVSLFWAGNIVLGRHIAGHVPPATLAWLR--WVLAILILLPFAWRAMKADWSVAL 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ K + +L F+ + + +AL P++ F V E+L+
Sbjct: 68 RHWKLLAVLGFTG--ITLFNTMQYHALEFTPALNVLLIQSTGPLMIAFWSLVLNGEKLSV 125
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q I L +L +L + L LA + + Y P S
Sbjct: 126 GQAIGISLSLLGVLTIICRGDPAVLANIEFNQGDLWMLAALMVYGIYSSLLVQRPKLSQL 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
GF + L + + + + F+ G++
Sbjct: 186 GFLGFTLSIGALLLTPIFIAERAVSPPITFDARALGSIAYVAVFPSVLAYLFFNRGVQLV 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + P+ ++ L + + +V+ +++ L
Sbjct: 246 GPNRAAPFFHLMPVFGSALAIVFLGERPHLYHAAGYALVLSGVIIATLWAPKR 298
>gi|296155983|ref|ZP_06838822.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
Ch1-1]
gi|295893489|gb|EFG73268.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
Ch1-1]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 81/283 (28%), Gaps = 7/283 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M + + + + + + + EV R+L+ L ++ + ++
Sbjct: 14 MRSIVLILVSMFCFALVDALAKSVALAYPANEVTFFRMLFGLVPAAAMCLHGKPIVERIR 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V A L G F L + ++ + L + LKE
Sbjct: 74 -----HLDVRGQTLRALTLLGASGLFFAGLPYMPLGEAVAIVYSETLLVIVLAPLLLKES 128
Query: 143 LNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L +AA + +L + + + SA+ A I +
Sbjct: 129 LKPRDALAAAAGFVGVLFVVRPDGSHSSWLGPVLLIASAFFGALSIIQIKRIRATDDSRT 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + S + ++ + G + + + ++A +
Sbjct: 189 TVLYFTAIGTIVTSASLFFAWRTPSLQALAVMALLGGFGTAGQLLMTMAFRQADAGALAP 248
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
YT+ + + + I + + ++V + + +
Sbjct: 249 YNYTSIVWAALFGYVAWGETIGGMSLLGIALIVGSSIAVAMRG 291
>gi|291277130|ref|YP_003516902.1| inner membrane protein OxaA [Helicobacter mustelae 12198]
gi|290964324|emb|CBG40174.1| putative integral membrane protein [Helicobacter mustelae 12198]
Length = 375
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/260 (10%), Positives = 77/260 (29%), Gaps = 13/260 (5%)
Query: 47 LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWG 106
+ + + + +RV ++P F + + + +++ + +
Sbjct: 119 IVDLPPILLGFYRVFLAIPIFFLFALRKGNLSKIPIKDIA------LMLLAGVFFGLDLV 172
Query: 107 FFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG 166
FF AL + + + +G F KE L+ ++ A + ++ + ++
Sbjct: 173 FFNTALHHTSVTNVNLICSLVVFVLAPIGVFFFKEHLHKSFLLGAGVAVIGIFVLIKGKS 232
Query: 167 IPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
++ ++ + A + + V +L + G
Sbjct: 233 DTSIATPYGDFLALLSNVSYSIFLALIYGLRKKYTAMALMVYVCIGSSLLLGIIAEIKEG 292
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
+ F Y + + ++ +P+ + ILK
Sbjct: 293 FMLPNSANAWIYVGLIVLFGQILGQGFFGYIMGKINTQVSSLIMLFSPITAAILGFLILK 352
Query: 280 QPIDTVRTIVFGIVVIAMVV 299
+ I + I++ + +
Sbjct: 353 ESIGIFEILGMFIILFGVYI 372
>gi|257466837|ref|ZP_05631148.1| transporter [Fusobacterium gonidiaformans ATCC 25563]
Length = 297
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 80/300 (26%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + +WG + ++ + + R S V I
Sbjct: 2 NQFLLGNGALLLTSFIWGSAFVAQVTGMDLIGPFTFSASRCFLSTLFVLALIFLQKE--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
KD K + + L + L TSF + V+ LG F
Sbjct: 59 --KDDTKMKDLLFGGIACGLFLFLGSSCQQVGLQYTTAGKTSFITSLYIVLVPLLGIFFK 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
K+ +N +A L + L ++ + + + + A
Sbjct: 117 KK-VNLFTWMAVFLGTVGLYLLAMSGLTEGANINKGDFFVFLGSFFWAGHILVIDYFTKK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ A+ L + + G K
Sbjct: 176 VNPIKLSCLQFAVTTCLAASLALSIETPTLPNIFASWKSIAYAGILSGGIAYTLQIVGQK 235
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ + ++ +L + + + I+ IA++V +P+ + K
Sbjct: 236 HTTNTTLASLILSLESVFGAIAGFIVLHERLKPSEILGCIIMFIAILVAQIPSDLFQKKK 295
>gi|258543135|ref|YP_003188568.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-01]
gi|256634213|dbj|BAI00189.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-01]
gi|256637273|dbj|BAI03242.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-03]
gi|256640325|dbj|BAI06287.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-07]
gi|256643382|dbj|BAI09337.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-22]
gi|256646437|dbj|BAI12385.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-26]
gi|256649490|dbj|BAI15431.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-32]
gi|256652476|dbj|BAI18410.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655534|dbj|BAI21461.1| drug/metabolite (DMT) transporter integral membrane protein
[Acetobacter pasteurianus IFO 3283-12]
Length = 337
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 85/300 (28%), Gaps = 16/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + A + + + +SV+E++ R L+S+P V +
Sbjct: 35 MQHNLARGAYLLALATLFTALLNALQKITGSTLSVVEIVFFRNLFSMPFVIVIALRGGLV 94
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L G V + + + + A+ + P+ + L
Sbjct: 95 LK--------THHFGGHVIRSVVGLISMIMTVVAVTHLPLAEQQVLSYTQPLFLILLSIP 146
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPV 190
+ ER + + +A + + ++++ G A T+ +
Sbjct: 147 LMHERPSVQRWVAVGVGFIGVIVVATGKGLLGAGHSTVPTWAYAVALGQGAVGALTTMQI 206
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ A+ + + + + D L LI G + +
Sbjct: 207 RQLSATEKSTTIAMWQAILMTIATAAALPFVWQMPTRADVLCLIAVGAFAGIAQVLQTEA 266
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
A++S +G Y + + + + +++ + + L K
Sbjct: 267 FASAQVSAIGPFAYCGLVWAALIGWLGFHEIPGVAMFVGGLLIIGSGLWMLRHERPQKQK 326
>gi|300023676|ref|YP_003756287.1| hypothetical protein Hden_2167 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525497|gb|ADJ23966.1| protein of unknown function DUF6 transmembrane [Hyphomicrobium
denitrificans ATCC 51888]
Length = 301
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 91/294 (30%), Gaps = 10/294 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + A L+ ++L + + E++ R L +
Sbjct: 4 RLKAVLLMCTAVSLFSCLDATAKYLGSYQGIPTSEIVWARFLGQALLMVVIF------GP 57
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K G+ + + + F A+ + T F+ P++ L L
Sbjct: 58 RSVPGWFKTKRPGLQLLRSLFMVATTAFNFIAIQYLRLDQTISIAFLAPLLVAALAGPLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + IA + + +LI+ + +A S +A I G
Sbjct: 118 GEYVGWRRAIAIVSGFIGVLIVVRPGIVEFHPAFLASLVSMTAYALFMIVTRKLAGVDPP 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L L VV GF + D L L+ G L + + A S+
Sbjct: 178 LVTLFYALLVGVVAGGFFAIPEWVWPATAFDWLLLLATGALGGLGHYLLIHAYALAPASS 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
V Y + MI + D I +V+ + + + I ++K
Sbjct: 238 VSPFLYFQLMSMIGLEFLVFGDTPDRWTLIGSSVVIASGIYLVHRERIAHRESK 291
>gi|260588604|ref|ZP_05854517.1| integral membrane protein [Blautia hansenii DSM 20583]
gi|260541079|gb|EEX21648.1| integral membrane protein [Blautia hansenii DSM 20583]
Length = 294
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 87/292 (29%), Gaps = 20/292 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +WG T + T+ L+ + +E++ R L +
Sbjct: 2 KENAKGHFLALFTICVWGTTFIATKVLLKAFTPIEILFMRFLMGYFILLLM-------NH 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF- 138
+ + + T + +++ AL P + LG +F
Sbjct: 55 QGLSVSNIKQELYFIGAGITGVTLYFLLENIALTYTYASNVGIIIATAPFFTAILGRIFL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP--------- 189
+ERL I L I ++++++H +
Sbjct: 115 KEERLKTGFFIGFLTSITGIILISVHGSSAFSLNPKGDILAFLAAFVWACYSVLVKKIGS 174
Query: 190 --VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + V GF G F + L ++ F +
Sbjct: 175 FGMSVIQSTRHIFFYGIFFMIIPVFLMGFEWGLERFRNPVYLGNMLFLGIGASALCFVTW 234
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +K + Y +P++ I+ S +L++ I V I +V +++
Sbjct: 235 NLAVKLLGAVRTAVYLYLSPVVTIIVSALVLEEKITVVSAIGVVLVFAGLIL 286
Score = 36.0 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 1/134 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+A+ + F + + Y + + +
Sbjct: 8 HFLALFTICVWGTTFIATKVLLKAFTPIEILFMRFLMGYFILLLMNHQGLSVSNIKQELY 67
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ-PIDTVRTIVF 290
F+ + F + + + S VGI+ TAP + LK+ + T I F
Sbjct: 68 FIGAGITGVTLYFLLENIALTYTYASNVGIIIATAPFFTAILGRIFLKEERLKTGFFIGF 127
Query: 291 GIVVIAMVVYLLPT 304
+ +++ +
Sbjct: 128 LTSITGIILISVHG 141
>gi|229015794|ref|ZP_04172772.1| Transporter, EamA [Bacillus cereus AH1273]
gi|229022002|ref|ZP_04178559.1| Transporter, EamA [Bacillus cereus AH1272]
gi|228739308|gb|EEL89747.1| Transporter, EamA [Bacillus cereus AH1272]
gi|228745510|gb|EEL95534.1| Transporter, EamA [Bacillus cereus AH1273]
Length = 330
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 95/300 (31%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGAMLLLFFKALGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K ++ + + F + G + + + L
Sbjct: 88 MQFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 143 LYKDDALNMRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLGAAMMYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + F G F ++ L LI L++ FCI++
Sbjct: 203 GSKTLDVGYMTAYQMIFGSIGLLCIGAFQVGVIPFTFSLHAILMLIYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSLILGEAIHSFVLFGLACVAAGIIVVNRAPAKQK 322
>gi|326388056|ref|ZP_08209659.1| hypothetical protein Y88_0088 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207222|gb|EGD58036.1| hypothetical protein Y88_0088 [Novosphingobium nitrogenifigens DSM
19370]
Length = 304
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 90/292 (30%), Gaps = 16/292 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEV-ISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + ++ + + R + G A+ + L P
Sbjct: 15 MVILCLIWGTQQVAIKWAAPAMSATLQMGLRSGLAALG-TLAVAFHRREQRWLNRATLVP 73
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ F + + Y + +V LG + ERL+ Q
Sbjct: 74 GLLVGSTFGLEFVFAGEALRYTTASHVTIY----LYSAPIMAAVGLGLRYRDERLHPAQW 129
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIPVGSSEGFFI 198
I ++ + + L G P A+ A +W+ F + + ++
Sbjct: 130 IGVIIAFAGVALAFLGRGDPDRYPAMRLGDALSLAAAASWAVSSFILRGSRLANAPASVS 189
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L + G + ++ + + ++R S
Sbjct: 190 LFYQLCGAFVLAGGMAVTLGETAIKPTAWLAVMLTWQTLVVAFASYLTWFALLRRYSASR 249
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+G++ + P+ +V+ + +L + IDT I +++ +V+ +
Sbjct: 250 LGVLSFMTPVFGVVAGIALLGEKIDTNFAIGGCMILGGIVLASTRLPRLGRR 301
>gi|228963520|ref|ZP_04124677.1| Transporter, EamA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228796214|gb|EEM43665.1| Transporter, EamA [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 327
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 98/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S + F
Sbjct: 25 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFLLSGVMLLFFFKVLGKN 84
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 85 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 139
Query: 138 FLKER-LNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
K+ LN ++I + +++ ++ H GI L L A +Y
Sbjct: 140 VYKDDALNMRKLIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 199
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 200 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 259
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 260 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 319
>gi|195500061|ref|XP_002097213.1| GE26098 [Drosophila yakuba]
gi|194183314|gb|EDW96925.1| GE26098 [Drosophila yakuba]
Length = 347
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 88/297 (29%), Gaps = 23/297 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L + + + + + + L V+ +E+ S R + L ++Y +
Sbjct: 38 LGILLATLSSLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKR 97
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ M YA S F TPV FLKE
Sbjct: 98 VILLLRCFM-------GTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT 150
Query: 145 HLQIIAALLIILSLLIMTLHSGIP----------------LLSLAIAVTWSAYCFARKTI 188
++ L ++ ++++T + +A + +
Sbjct: 151 LFNVLTINLTLVGVVLITRPPFVFGETAESEDIAGKTYDIWGPVAAISSTLFGANVYILL 210
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ F + M AL Y + S G + D ++ G+ + + +
Sbjct: 211 RALKNLHFSVIMTNFGTIALVYTLIVCGSIGAVCWPSCGRDRWLVVVLGVFSFLGQILLT 270
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ + V I + + + + + +V+ ++V+ L
Sbjct: 271 LSLQIEQAGPVAIARCADIVFAFIWQMLFFGETPTAYSLVGAVMVMGSVVLTALKKW 327
>gi|13476789|ref|NP_108358.1| hypothetical protein mll8218 [Mesorhizobium loti MAFF303099]
gi|14027550|dbj|BAB53819.1| mll8218 [Mesorhizobium loti MAFF303099]
Length = 319
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/300 (9%), Positives = 92/300 (30%), Gaps = 17/300 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ G ++L + +++ ++ + R+ + + + G +
Sbjct: 19 SSLTGYPAAILCWLLSAGVYIAAKWVAPEMPPWGLCFWRLTLACAILLPIVHRHHGAMIG 78
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +AV ++ A L + G + L ++PV+++ L L
Sbjct: 79 L----LRTRAVEVVAVGAIGLTLCQGMIYHGLNDTNATTAGIIMALSPVMTMVLARFVLG 134
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTI 188
E L + + AL+ + ++ + H G + + R+
Sbjct: 135 EPLGLWKSLGALVALAGMIFIVAHGNLTALLQLEFNAGELWIVGSAFCWGLYTVLLRRAK 194
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + E + G + ++ +++
Sbjct: 195 FGIELLPMVVLLLGAGALVALPFHLWELFNDERSVMNVHSILALAYLAGPGGALMYYLYN 254
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ S ++ Y + + + + +L + + I +V +++ + ++
Sbjct: 255 KSVETLGASRASMLLYLQTVFVAMLAYLLLGEDLHDYDLIGAAFIVAGIILATVIKPRSA 314
>gi|28900468|ref|NP_800123.1| putative permease [Vibrio parahaemolyticus RIMD 2210633]
gi|260365621|ref|ZP_05778142.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus K5030]
gi|260877421|ref|ZP_05889776.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AN-5034]
gi|260898902|ref|ZP_05907343.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus Peru-466]
gi|28808848|dbj|BAC61956.1| putative permease [Vibrio parahaemolyticus RIMD 2210633]
gi|308089194|gb|EFO38889.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus Peru-466]
gi|308090656|gb|EFO40351.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AN-5034]
gi|308111457|gb|EFO48997.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus K5030]
Length = 292
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/296 (8%), Positives = 87/296 (29%), Gaps = 12/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ + ++ + ++++ ++ + I R + +
Sbjct: 3 NSERKATVILVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCF------- 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + ++ +F ++ + + V
Sbjct: 56 RPLKAARLKDVLAASGVGLLLGGAVMTWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMF 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++R + I+ + ++ L ++L G L A A F +
Sbjct: 116 QQRPQRIFWISLPIAVIGLACLSLAGGWKQSASQLWFLGAALILALHFNVNSKYSQKLPV 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + + + F + L S + + + G K +
Sbjct: 176 LLLTCVQLFSAGCLGLLVSFLMESRPEQVDSSIWWWFALSTLLATSLRYVMQTMGQKFVQ 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ +V S+ + + + + +++ ++V+Y K
Sbjct: 236 AGNAALIMILEPVWTVVLSILWYGEVLTANKLVGCLLILFSLVIYRTGGRFRFPKR 291
>gi|148543663|ref|YP_001271033.1| hypothetical protein Lreu_0427 [Lactobacillus reuteri DSM 20016]
gi|184153076|ref|YP_001841417.1| transport protein [Lactobacillus reuteri JCM 1112]
gi|227363365|ref|ZP_03847492.1| DMT superfamily drug/metabolite transporter [Lactobacillus reuteri
MM2-3]
gi|325682027|ref|ZP_08161545.1| DMT superfamily drug/metabolite transporter [Lactobacillus reuteri
MM4-1A]
gi|148530697|gb|ABQ82696.1| protein of unknown function DUF6, transmembrane [Lactobacillus
reuteri DSM 20016]
gi|183224420|dbj|BAG24937.1| transport protein [Lactobacillus reuteri JCM 1112]
gi|227071604|gb|EEI09900.1| DMT superfamily drug/metabolite transporter [Lactobacillus reuteri
MM2-3]
gi|324978671|gb|EGC15620.1| DMT superfamily drug/metabolite transporter [Lactobacillus reuteri
MM4-1A]
Length = 304
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 97/305 (31%), Gaps = 14/305 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
S ++GT + A WGI+ L+ + L ++ + + R++ + +
Sbjct: 1 MSNKKVLGTAMIITACTFWGISGLFAKALFNVSSSITSMWLTQVRMVSAGIILVLLSQIR 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ L + + L + A+ + + F+ P +
Sbjct: 61 GKHPFQIFKDLHSAWIIFAYGVFG--LVPVQYAYFMAVQYGNASIATILQFIGPFFIIAY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARK 186
++F ++II+A++ L + I+ H L++ ++V A
Sbjct: 119 QAMFRHLPPRRIEIISAIIAFLGVFIIATHGQFNHLAMTLSVLIWGLISAIGVATNTLIP 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + + H L + F +
Sbjct: 179 QNMLREGRVPSLIITGWGLLFAGLTLVLIHPSQPHIPNVPSVWLYVLGILVIGTLIPFQL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ +K +T +M+ PL + SV I + + +V++A++ +
Sbjct: 239 ANNSLKYIDATTFSLMDAFEPLSATIGSVLIFHLQMTGADILGSILVIVAVLAINIRIPQ 298
Query: 307 NSGKN 311
K+
Sbjct: 299 KKLKS 303
>gi|291043178|ref|ZP_06568901.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291012784|gb|EFE04767.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 301
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/282 (10%), Positives = 83/282 (29%), Gaps = 17/282 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 11 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 64 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 124 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 184 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G++ P++ ++ +V IL + + V + +V+ A
Sbjct: 244 NASGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATF 285
>gi|190892693|ref|YP_001979235.1| permease [Rhizobium etli CIAT 652]
gi|190697972|gb|ACE92057.1| putative permease protein [Rhizobium etli CIAT 652]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 76/279 (27%), Gaps = 11/279 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +++ A + G T + ++ + + + R + P + L
Sbjct: 2 SKQVQGYVYLTLAMLTVGSTVIASKLIAAGLPPFTATALRFALAFPVFLLLMRVTGVRLP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + +++ + + I L PV+S + + L
Sbjct: 62 KL----ARRDRLILVIQAGAGSVGYTTLLISGLSLTSAADAGVIIGTLPVVSAAISILLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
ER ++A L +L + S + + +AV
Sbjct: 118 GERPQPALLLAVALATAGVLSIAFTPDAAGGSLAGNMLILLAVVCEGLFILLNKRLTVDI 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ I V+ F + F ++ G +R
Sbjct: 178 PPLAQSTLMTGIGFAVAVIPAVFEAPSAQGFSASAAAAVGYYALVPTVAGFLLWYAGAER 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ + AP+ ++ + L +PI +
Sbjct: 238 VSGTEASLFTALAPVSAVLLAFVTLGEPIGFGQLAGIAC 276
>gi|329116374|ref|ZP_08245091.1| membrane protein [Streptococcus parauberis NCFD 2020]
gi|326906779|gb|EGE53693.1| membrane protein [Streptococcus parauberis NCFD 2020]
Length = 306
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 103/298 (34%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G+L V A I WG++ + Q+L V V + S R++ S + +L+
Sbjct: 5 KGSLMVLFAGIAWGLSGVSGQYLMLHGVEVNLLTSLRLMISGSVLCVMAFMTQKE-KMLR 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + +FS L ++ ++ A+ + +++PV+ + + ++ K
Sbjct: 64 VLASPNILLNIFMFSILGLLMNQYTYMNAIKHTNAGTATVLQYLSPVLIMSVVAINEKRM 123
Query: 143 LNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + ++ + IL ++ H L + +A + + G
Sbjct: 124 PSVAEGLSIIFAILGTAVIATHGQLGSLAITPEGLVWGLISAITATLYVLMPARLIEKWG 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + I + + L + F + F G
Sbjct: 184 SLVVIGLAMIFSGSLFTVIVRPWRYNMDLTTGNSIALFGLIAIGTIFAYTFFLKGASLVG 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ P+ ++ +V +L + + I +++A+++ L I + K
Sbjct: 244 PVKGTLLAAVEPVASVLFAVVLLSEFFYPMDLIGMFFIMMAVLLISLRDFILLRRQKR 301
>gi|300814417|ref|ZP_07094688.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511525|gb|EFK38754.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 300
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 83/294 (28%), Gaps = 5/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ + A I+WG + + + R + F +
Sbjct: 2 SRELKSTIMLLNAAIIWGFAYVVQVLAMNYIGPFTFNFARFFIGWIFLIIIYSIFKKTIP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + + +L L T ++ + + FL
Sbjct: 62 YYKNEIFSLRNTIKYGIICGLLITVGNSLQQVALLGTTTGKVGFLTSTYIVIIPIIQFFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEG 195
R++ I + L + ++++ + I+V + A E
Sbjct: 122 GNRVSKKIIFCIGVATLGVYLLSIKGNFSINRYDGFVLISVLFFAVHIMIMASLPDDCEK 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ M + + F ++ L + + + + K
Sbjct: 182 ILVSMIQFIVISTFSLIIALIFENIIIRDIFAAYKEILFIGIISSGVAYTLQMIAFKEID 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + ++ L Q ++ I++IA VV LP+ +
Sbjct: 242 PTIGSLVASLESVFAVLGGWVFLNQRMNLREISGCVIILIATVVAQLPSKGKTK 295
>gi|229108188|ref|ZP_04237810.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock1-15]
gi|229148921|ref|ZP_04277166.1| Transporter, drug/metabolite exporter [Bacillus cereus m1550]
gi|228634461|gb|EEK91045.1| Transporter, drug/metabolite exporter [Bacillus cereus m1550]
gi|228675204|gb|EEL30426.1| Transporter, drug/metabolite exporter [Bacillus cereus Rock1-15]
Length = 310
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 100/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 7 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 67 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 125 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 185 ECGTTVVIGWGMLIGGIALLIYNRSFGWNQFSQTLTLKTFSMLILIIISGTLSFLLYIGS 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 245 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 298
>gi|207724415|ref|YP_002254812.1| tonb box harboring protein [Ralstonia solanacearum MolK2]
gi|206589636|emb|CAQ36597.1| tonb box harboring protein [Ralstonia solanacearum MolK2]
Length = 298
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 82/294 (27%), Gaps = 9/294 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G LF+ A + G T + ++ + + + R +LP +F ++
Sbjct: 2 SNRTIGYLFLSLAMMTVGSTVIASKLIAGSLPPFPATALRFAVALPFLFALVLLRGERWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +++ + + I L P +S V L
Sbjct: 62 SL----SRRAWGLLILQAGAGSVGYTTLLISGLAYLPAADAGVVIGTLPAVSALFSVVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP----LLSLAIAVTWSAYCFARKTIPVGSSEG 195
ER +++ LL + ++ + + + F +
Sbjct: 118 GERPKLRLMVSVLLATIGVMAVAWTGSGSASLLGVLFILGAVICESAFILLNKRMPVPLP 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + L + + + + F ++ G R
Sbjct: 178 PLLQATAMTGLGLLVSLPVAVLDFPSTAPSSAAVAAVVWYALVPTVGGFLLWYAGAARVS 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S APL + + L + I + V++A++ L S
Sbjct: 238 GSEAATFTAVAPLTAVALAALFLHERIGATQAFGVVAVILAILTLTLSVRPLSR 291
>gi|294083830|ref|YP_003550587.1| putative transporter, RarD family, DMT superfamily [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663402|gb|ADE38503.1| possible transporter, RarD family, DMT superfamily [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 312
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 94/308 (30%), Gaps = 17/308 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
+A+ G L + A ++ + + L +++ R + + ++Y
Sbjct: 9 STSATTSMSKGILQICLAMLIIPAIDVCAKTLGRSFDPIQITFFRFFMQICLLLPLVIY- 67
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ P + + L + F +A+ +FV P+I L
Sbjct: 68 ------NRLWTIPPGTLAIQCMRGVTLVIATFCFFWAIQHLPLAEAIAIFFVQPLILTGL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L E + +I A + ++ +++ S + A+ SA A I
Sbjct: 122 SVLILGETIRMRRIFAIIFGLIGAMMVLQPSFVIFGWPALLPLVSAVSMAFYMIFTSRIS 181
Query: 195 GFFIEMCV---------LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + + + G F + +++G G+ ++
Sbjct: 182 KVAHPFQMQFVVGLVAVIMLGIVMILGQFADIPGTAFLTPDSHHFKWIVGMGIASTIGHM 241
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A S + +Y + + + I++ + V
Sbjct: 242 LIVFSTQNAPASVLAPFQYVEIVTAALFGYLFFNDTPADTTFVGTFIIIASGVYLFHRER 301
Query: 306 INSGKNKT 313
+ + K
Sbjct: 302 VVARKMAK 309
>gi|229522464|ref|ZP_04411880.1| hypothetical protein VIF_003021 [Vibrio cholerae TM 11079-80]
gi|229340449|gb|EEO05455.1| hypothetical protein VIF_003021 [Vibrio cholerae TM 11079-80]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 86/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 3 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +A++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKRHLSKLAFLALLGMALNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 119 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 179 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRN 289
>gi|51892889|ref|YP_075580.1| putative transporter protein [Symbiobacterium thermophilum IAM
14863]
gi|51856578|dbj|BAD40736.1| putative transporter protein [Symbiobacterium thermophilum IAM
14863]
Length = 326
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 88/295 (29%), Gaps = 14/295 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
E +G + VF A LWG + ++ ++ +S V++ ++
Sbjct: 1 MERTRGRQTLGYMMVFGAASLWGTLGVVSRNLYVGGLSAQAVVTL----RASMAAALLLA 56
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L ++ + +A + + + + + P
Sbjct: 57 ALTVLRPATLRVRLRDIPLFAAYGLVSVAAFYLLYFLTIQHLSVAAAAVLMYTAPAFVAV 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFAR 185
++ L E L +++A L + ++ + +
Sbjct: 117 AAALTLGEPLTQGKLLALTLTMAGCALVARAYEPSVFRGQLIGVLTGLGSGFTYGMYSIF 176
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + ++ L A V++ G + +
Sbjct: 177 GKHALKRYNPWTVQAYSLLFGAAPLVLFFGREAVRSLARSPEALPWLAYLALVTTLGAYG 236
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ G++ + S ++ P++ + +IL++ + + I +V+ + V+
Sbjct: 237 LYLSGLQVVEASHAALLSTVEPVVAALLGFWILEESLRLPQVIGILLVLGSAVIL 291
>gi|120608982|ref|YP_968660.1| hypothetical protein Aave_0279 [Acidovorax citrulli AAC00-1]
gi|120587446|gb|ABM30886.1| protein of unknown function DUF6, transmembrane [Acidovorax
citrulli AAC00-1]
Length = 321
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 87/299 (29%), Gaps = 12/299 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ +G V A +LWG T ++ + V + R+L + + + G
Sbjct: 23 QPASRAPLGIGMVLLAAVLWGTTGTAQSLAPSGLAPVWVGALRLLIAGAFFAALLRWQGG 82
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + A G+ V + + + T+ + P+ + L +
Sbjct: 83 ARGLGALPWRGVLAGGVCVAAYNLSFFAGVK-----ASGVALGTAIAIGSGPIWAGLLQT 137
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V + + LL + M L + + + ++
Sbjct: 138 VVQRRWPAAVWWAGTLLGVAGGAAMALDGRTSVQAPPGGIALCLVAGLSYAAYALVNQRL 197
Query: 197 FI------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ A + F+ + + L + + +F++
Sbjct: 198 VARAAPGAVNLAVFGSAALLSLPAAFAIAGPLAVSARAWGVVLYLGLVATGVAYLLFTHA 257
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ +T + P++ +V ++ + + V+ +++ + +
Sbjct: 258 LRHISGATGVTLALAEPVVAFCLAVAVVGESPSAMAVWGLAGVIGGLLIVVWSEIRGRR 316
>gi|295687541|ref|YP_003591234.1| hypothetical protein Cseg_0089 [Caulobacter segnis ATCC 21756]
gi|295429444|gb|ADG08616.1| protein of unknown function DUF6 transmembrane [Caulobacter segnis
ATCC 21756]
Length = 297
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 102/299 (34%), Gaps = 12/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G L++ + I + + +FL +R L + + I +
Sbjct: 4 TPNLRGALWMLASAIGFTVMTTLIKFLGADYPAALQTFYRQLAGVIILLPLI-------A 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
G+L+F ++ + YA + F + V L + L
Sbjct: 57 RDWRGAFRTTRPGILIFRSSAGVLALIMGFYAYQKLPLADANALSFTRTLWLVPLAAFVL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+E + L+I AAL+ + +LIM G + S+ FA +
Sbjct: 117 REPIGPLRIGAALVGFVGVLIMLRPGSGGMGAWIGWPQACALISSLLFALTITGMKVMTR 176
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L A+ +++ + + PD L G++ + + G++ +
Sbjct: 177 DHSPFVLLVYAAVLGLIFAIPPALFVWRWPSWPDLGLLAAMGVIGTLTQGAYIKGMEAGE 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + ++YT + + + + + I IVV + ++ + + + +
Sbjct: 237 AAVMAPIDYTRLVFAVGAGFLLFHEIPKPATLIGAAIVVASTLLISWREHQLAQRARAQ 295
>gi|148990255|ref|ZP_01821466.1| hypothetical protein CGSSp6BS73_03656 [Streptococcus pneumoniae
SP6-BS73]
gi|221232176|ref|YP_002511329.1| hypothetical protein SPN23F_14120 [Streptococcus pneumoniae ATCC
700669]
gi|225854890|ref|YP_002736402.1| membrane protein [Streptococcus pneumoniae JJA]
gi|147924394|gb|EDK75484.1| hypothetical protein CGSSp6BS73_03656 [Streptococcus pneumoniae
SP6-BS73]
gi|220674637|emb|CAR69205.1| putative membrane protein [Streptococcus pneumoniae ATCC 700669]
gi|225722537|gb|ACO18390.1| membrane protein [Streptococcus pneumoniae JJA]
gi|332200889|gb|EGJ14961.1| hypothetical protein SPAR69_1401 [Streptococcus pneumoniae GA41317]
Length = 298
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + I +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFIGMAMILFAVTLISLKDLFLEK 298
>gi|58338132|ref|YP_194717.1| permease [Lactobacillus acidophilus NCFM]
gi|227902688|ref|ZP_04020493.1| DMT superfamily drug/metabolite transporter [Lactobacillus
acidophilus ATCC 4796]
gi|58255449|gb|AAV43686.1| predicted permease [Lactobacillus acidophilus NCFM]
gi|227869594|gb|EEJ77015.1| DMT superfamily drug/metabolite transporter [Lactobacillus
acidophilus ATCC 4796]
Length = 300
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 91/293 (31%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G WG + +FL V ++ R+++S + Y
Sbjct: 2 NQRYRGITLAVVGACFWGASGTAVEFLFSNTNVDTSWLVGLRLIFSGILLMLYACY-KYW 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + +++F+ + + A+ + F+ PV + S+
Sbjct: 61 DKVKAMFHDKKAVIMLILFAFLGMGSSQLSYFVAVKYSNAPTATVIQFLAPVFIIIYSSI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF- 196
K + +I+ + + I+ L+L+ A G
Sbjct: 121 RSKMLPRRIDLISIFVAVGGTFILATGGRFDQLALSPMACLWGLIAAISEAINTVMPGSL 180
Query: 197 -----FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I + A+ + L + ++ + + ++ +
Sbjct: 181 FKKYGTIPVVGTAMLMAGIAFLPNYFTQPMPKLTPVDISVIVYIIIGGTLLAYTMYLSSV 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ STVG++ PL+ + SV +L + ++++A + L+PT
Sbjct: 241 QYIDPSTVGMLGAFEPLIATILSVTLLHADFGPMDMFGGFLIIVATFMQLVPT 293
>gi|134293981|ref|YP_001117717.1| hypothetical protein Bcep1808_5304 [Burkholderia vietnamiensis G4]
gi|134137138|gb|ABO58252.1| protein of unknown function DUF6, transmembrane [Burkholderia
vietnamiensis G4]
Length = 317
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 85/290 (29%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P + +
Sbjct: 6 NTRLIGYLYLTAAMAGVGSTVIASRIAAGGLPPFTATALRFLIATPLLLALMRIQRARWP 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ A+ ++V +A + I P +S + +V L
Sbjct: 66 RV----STRDAILLVVQAAAGGVGYTVLLIGGTKLSSPIDAGVMLGTLPAMSTLIAAVVL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
+ER AA L +L +T G + SL AV A
Sbjct: 122 RERQTPRDWCAAALATAGVLTVTFAPGHAMPSLRTLAGNALVLAAVACEAVFILLNRRLS 181
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L V + + + +
Sbjct: 182 TPLSTLALSAAMSGFGFMLALVPAAFEWHALASGWTLGAVSAIAYYALVPTVLGYVCWYA 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + + + + +VV AM+V
Sbjct: 242 GSARTSGTEAALFTAVAPVSAVLFAVALFGETLGGTQLLGVALVVAAMLV 291
>gi|325292364|ref|YP_004278228.1| hypothetical protein AGROH133_04923 [Agrobacterium sp. H13-3]
gi|325060217|gb|ADY63908.1| hypothetical protein AGROH133_04923 [Agrobacterium sp. H13-3]
Length = 312
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/307 (11%), Positives = 92/307 (29%), Gaps = 16/307 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G + + + + V ++ R +++ + + + S
Sbjct: 6 TNPFRGISLKLISVGFFLVMQTCIKASGPDVPAGQITFFRSAFAIIPIVVYLAWLHALTS 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + + + Y L + +P+++V + L
Sbjct: 66 AL-----HTNNLIGHFKRGFLGILSMACGFYGLTLLPLPEFIAIGYASPLLAVVFAAFIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARKTIPV 190
+E++ + A + ++ +L++ AIAV A I V
Sbjct: 121 REKVRIYRWSAVFVGMMGVLVILWPKMTLLREGGFAAGEGLGAIAVLCGAALGGLAMIQV 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ +L + + S + + + LI G+ +
Sbjct: 181 RQLVETEKTPTIVLYFSLTATLLSLVSVPFGWSALDTKQAVLLITSGICGGVAQIFLTES 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV-FGIVVIAMVVYLLPTVINSG 309
+ A++ST+ EY++ + I S + I ++ + + +
Sbjct: 241 YRHAEVSTIAPFEYSSIVFGIAVSYILFGDIPTLTMLIGTAIVIFAGIFIIFREHQLGLA 300
Query: 310 KNKTKKS 316
+ +K+
Sbjct: 301 RRAARKA 307
>gi|256830709|ref|YP_003159437.1| hypothetical protein Dbac_2946 [Desulfomicrobium baculatum DSM
4028]
gi|256579885|gb|ACU91021.1| protein of unknown function DUF6 transmembrane [Desulfomicrobium
baculatum DSM 4028]
Length = 298
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 95/301 (31%), Gaps = 17/301 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
K + S ++ G LF A ++W + + L Q + + R + G+
Sbjct: 2 KHSTSSKSLQGILFALGATVIWSGNFIVARSLNQSIEPATLSMLRWATAFVGLLPFAWRA 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + M+ + + A T S TPV + L
Sbjct: 62 A----WAERAAIRRSMPAMIPMALLGVTTFNALLYKAAHTTSTLNLSLIATSTPVFIILL 117
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYC 182
+FL ERL +++ + +L++ G +SLA +
Sbjct: 118 ARIFLHERLTTRKMLGLTFALGGVLLLITGGDLGRLTGLDFAIGDLWMSLAAVIFAGYSI 177
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
R+ S F + + + I L + L +
Sbjct: 178 LVRRFPGGLSQPVFLLTLFGVGIVFLAPWTGWELLTAGAPTITLGAAGAILYVGLGASLA 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ +++ + S G++ Y+ PL V + L +P+ + + G ++ +V+
Sbjct: 238 AYAMWNSAVASIGPSLAGLIYYSLPLFSGVMAFLFLGEPMGLIHLLSAGCILGGIVLATR 297
Query: 303 P 303
Sbjct: 298 R 298
>gi|228950554|ref|ZP_04112693.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228809120|gb|EEM55602.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
Length = 310
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+L++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLL----FSFKQLKRSVEH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I L + +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIALGGVGVLLITIPSSNVDQEVSLIGDILILLSTFLFAFYTILLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMAETFYYGFPKIETWKTGFSVMYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 244 TVLASVSGLYLNALPLISIVASIVLLDESVTWKIVIGGSLVLIGV 288
Score = 40.3 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L + ++++ +P
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLLFASGICLLFSFKQLKRSVEHKQVP 67
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I I
Sbjct: 68 WKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQLNYWI 127
Query: 289 VFGIVVIAMVVYLLPT 304
+ + +++ +P+
Sbjct: 128 GIALGGVGVLLITIPS 143
>gi|218710717|ref|YP_002418338.1| hypothetical protein VS_2800 [Vibrio splendidus LGP32]
gi|218323736|emb|CAV20088.1| hypothetical protein VS_2800 [Vibrio splendidus LGP32]
Length = 282
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 100/289 (34%), Gaps = 10/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L + + ++ + + L V L+ I R L SL +
Sbjct: 2 SNITVGILLLIAGNLFASLSDVAVKLLNGEVPPLQYIFFRQLISLLIITPL-------WL 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + + ++ + G + A+ + ++V P++ + L L
Sbjct: 55 QQKKEQRRLQQAKVTIIRGQLILIGSGCMVVAITHLSLATANAVFYVAPLLMLPLSMFLL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+ ++IA + + LI+ S A+ +A A + V
Sbjct: 115 KEQPALGKVIATTIGFIGALIVLRPS--QFHWAALFALGTALTLALFNVLVRKLPSEQTV 172
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L LF + + ++ ++ ++ L + ++A S +
Sbjct: 173 ITTLWWTTLFSIPASLVLCFLYWQPVSVEHLGYIALSATLILSYNGLAVAAYQKAHSSQI 232
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ EY+ + + + + DT+ I ++++ + + P +
Sbjct: 233 ALAEYSGLVFVALIGAIWFDEIPDTLTFIGIMLIILPLAPFKRPKKRAN 281
>gi|218230957|ref|YP_002367918.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
B4264]
gi|218158914|gb|ACK58906.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
B4264]
Length = 289
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 97/293 (33%), Gaps = 13/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + WG + L+ + LE V +++ R + +
Sbjct: 1 MKPIKANLMILLVTMTWGTSYLFMKIGLETVPSFSLVALRFGIAFLVCAAVFFKQFRSIH 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +L V I L T F +T + L V
Sbjct: 61 FVTLKYG--------FILGFLLFVVSASVILGLKTTSASNAGFLASLTVIFIPLLSIVLF 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEG 195
K+RL++ II++L+ + + ++TL++ + L S +A + A+ +
Sbjct: 113 KDRLSYRLIISSLVAMTGIGLLTLNNQLTLNSGDLLCILAALFYAFHIIVTGRAAKVANT 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L F V+ L+ ++F + I + K
Sbjct: 173 LQLGILQLGFAGGFGVLSALIFEEPQLPSTKESWIAVLVLSIFCSAFAYIIQAMAQKYTT 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ G++ P+ + + + + + I +++ +++ + S
Sbjct: 233 PTHTGLIFSLEPVFSALFAYLFMNEVLSLKGYIGALLILSGVILAEIKVKRKS 285
>gi|86138675|ref|ZP_01057248.1| membrane protein, putative [Roseobacter sp. MED193]
gi|85824735|gb|EAQ44937.1| membrane protein, putative [Roseobacter sp. MED193]
Length = 338
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 81/292 (27%), Gaps = 10/292 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G LF+ A + + + + L V V +++ + S A +Y L
Sbjct: 43 NNLNGILFIIAAMAAFTLEDAFIKRLSGEVPVGQILIMLGIGSGAVFAGAALYRGDNLFA 102
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + P++ ++FL
Sbjct: 103 PAAWRGTAILRTLSEALGAMAFATALSLVDISTVAAV------FQALPLVITMGAALFLG 156
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS---AYCFARKTIPVGSSEGFF 197
E++ + A + +L++ I V ++ T V S
Sbjct: 157 EQVGWRRWSAICVGFAGVLMIVRPGLDGFDPSVILVLFAVLAIAARDLLTRLVDSQVSSA 216
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + GE N P ++G + + + S
Sbjct: 217 VVSFQAFASLIVAGALLLLMTGETASAINRPQAGLMLGGIIFGVIGYYAIVRATRIGDAS 276
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ Y+ L I+ V + + D + +++ + + + +
Sbjct: 277 AITPFRYSRLLFSILIGVVVFGERPDAMTLGGAALIIASGLYTFVRERRLAR 328
>gi|327189439|gb|EGE56601.1| putative transmembrane transporter [Rhizobium etli CNPAF512]
Length = 305
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/278 (15%), Positives = 92/278 (33%), Gaps = 8/278 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G + + +L+ + ++L +V +V+ R L + + I G +L +
Sbjct: 15 MTGVVLMLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMI-ARQGPRALFR 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
K + + + + + + A+ Y P+ L FL E+
Sbjct: 74 VEQKGLQFMRVAMATGDVALF-----YAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEK 128
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + +A L+ ++I S L ++ ++ FA + V
Sbjct: 129 IGWRRWLAVLVGFAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLRSTSDTTLV 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
G S G I + L+ ++ + + + +K A S + +
Sbjct: 189 TWQTVAALATGIGLSIGHWQPATPIDWSGMLLLG-VVATCAHLLITRSLKLAPASLLAPL 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+YT L IV D + I+V A +
Sbjct: 248 QYTLLLWAIVLGYIFFNDIPDMQIVVGAAIIVFAGLFI 285
>gi|323694405|ref|ZP_08108577.1| hypothetical protein HMPREF9475_03441 [Clostridium symbiosum
WAL-14673]
gi|323501552|gb|EGB17442.1| hypothetical protein HMPREF9475_03441 [Clostridium symbiosum
WAL-14673]
Length = 303
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 99/299 (33%), Gaps = 18/299 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + M +G++ L+++ LE++ +++ R + + + ++
Sbjct: 1 MKMMKKDIRMMKAVAAAVLGNSFFGLSFLFSKVALERLEPFVLLAVRFIVAFVMLNLVLL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ L +L+ +++ F Y + + PVI++
Sbjct: 61 TGKVKIRLT-----GKPVQKILMLGLVQPVLYFTFENYGIRGTSTAFAGTLLAIVPVITL 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARK 186
G +F KE + LQ+ A+L ++ + +++L L AV S
Sbjct: 116 IAGVLFRKEIPSRLQVFGAVLSVIGVAVISLAQQRGSNEAGGVAFLFCAVVSSVGYNLLM 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE------HFFLGNIPDTLFLIGYGLLN 240
S F ++ + +LF+ ++ G G +
Sbjct: 176 RDTADSFTSFERTYVMIGLGSLFFTCFSVIQSGGALGRLLQPLSGPGVWGSIFYLAAFSS 235
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F + +Y L+ I ++ I + + L + ++ I ++ + +
Sbjct: 236 VGAFFLLNYAFSYLNLAQASIFTNLVTMVSIAAGIVFLGESFTALQGIGSMAILTGVYL 294
Score = 43.0 bits (99), Expect = 0.059, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 36/103 (34%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A + +G L P L+ + F +YGI+ + G +
Sbjct: 48 FIVAFVMLNLVLLTGKVKIRLTGKPVQKILMLGLVQPVLYFTFENYGIRGTSTAFAGTLL 107
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P++ +++ V K+ ++ + VI + V L
Sbjct: 108 AIVPVITLIAGVLFRKEIPSRLQVFGAVLSVIGVAVISLAQQR 150
>gi|227893941|ref|ZP_04011746.1| DMT superfamily drug/metabolite transporter [Lactobacillus
ultunensis DSM 16047]
gi|227864245|gb|EEJ71666.1| DMT superfamily drug/metabolite transporter [Lactobacillus
ultunensis DSM 16047]
Length = 306
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/306 (11%), Positives = 93/306 (30%), Gaps = 12/306 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L ++ + + R++ S + +
Sbjct: 3 TQKQRRLWAFLAALACVMWGISGLFAKSLFNISSDITPMWLSQIRMVTSGIILLIIAGFL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + FV P +
Sbjct: 63 KQ--KPIATMKNKHDAWVIIAYGVFGLLPVQLFYFIVVKQANASIATILQFVGPFFVMAY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ K+ + + +IAA+ + ++++ H ++ +V + A
Sbjct: 121 LAFTHKQVMRRIDVIAAICAFIGVVLLATHGHFNHFAITPSVLFWGLLSAVGVATNTLIP 180
Query: 195 G------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + H + F + +
Sbjct: 181 IGVLKRVSSLVVTGWGLLSAGICLMIVHPQMPHIPNTPHVWLDVAAVIIIGTLIPFQLMT 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST +++ P V SV + + I +VV+A + +
Sbjct: 241 NSLRFIKASTASLLDAFEPFSATVGSVLCFGLVMTPMDWIGSILVVLAAMALNIAPKKKP 300
Query: 309 GKNKTK 314
N +
Sbjct: 301 KTNAHR 306
>gi|194398114|ref|YP_002038082.1| hypothetical protein SPG_1375 [Streptococcus pneumoniae G54]
gi|194357781|gb|ACF56229.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
Length = 298
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATTKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTAKVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ +L I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIILAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|111223289|ref|YP_714083.1| putative integral membrane protein [Frankia alni ACN14a]
gi|111150821|emb|CAJ62525.1| putative integral membrane protein [Frankia alni ACN14a]
Length = 426
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/303 (10%), Positives = 81/303 (26%), Gaps = 22/303 (7%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G L + WG+ L+ + + +V + R+ ++ + + L
Sbjct: 68 TRRGWLLFVAMALFWGVPYLFIKVAVREVDPVVATFGRIAVAVVVLLPVALATRSFSGLR 127
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L+ + + + V + + S PV + E
Sbjct: 128 GCWLR------LAMLGLVQIGVPFLCISVGERHVASSMASLLIATEPVFVALIAPRLTGE 181
Query: 142 RLNHLQIIAALLII-----------LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
R++ + + L + + +G+ LL+ + + +
Sbjct: 182 RVSRRRAVGLGLGLGGVAALLGVRVGGDTVFLAGAGLVLLASGCYALGAVLVQRSPFVHL 241
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
E A+ L + ++ + + +
Sbjct: 242 PRLGVVTAECVAAALVLLPVAALRLPGTT----PSRKAQSSIVVLGVVCTALAWITCLAL 297
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I S + PL+ + V L + + + F +++ + +
Sbjct: 298 ISEVGASRGTVFTCVNPLVAVALGVPFLHENLTRTMLLGFLLILTGSWLATGSGLPRRKV 357
Query: 311 NKT 313
+T
Sbjct: 358 ART 360
>gi|73670547|ref|YP_306562.1| integral membrane protein [Methanosarcina barkeri str. Fusaro]
gi|72397709|gb|AAZ71982.1| integral membrane protein [Methanosarcina barkeri str. Fusaro]
Length = 294
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 93/283 (32%), Gaps = 1/283 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ L V I++G ++ ++ +S ++ R+ + L +F ++ G
Sbjct: 4 QKKSLNPYLEVVTGSIIYGTIGVFLDQVQDMSTGSILFSRLFFGLCMIFIYLLLNQGLRQ 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF-SYFVTPVISVFLGSVF 138
L K + L+ + T + + L + Y S+
Sbjct: 64 LKPHKKKRYLLLLGLLNAITGICYFSSIRYSGVSVAVLLLYTAPIYVNLFAPSILGEHRN 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L L IA +L+I + H+G + S F I + +
Sbjct: 124 SNSFLPLLLAIAGVLLIARPGEILGHTGPEFQKGLLFGLMSGLSFGANIITIRYLRNDYS 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +++ + + + L+ +GL +F I+ GI + T
Sbjct: 184 GIAQTFWLTGISLLFMLPAVFSTPTAVFVKNLDILLLFGLTITFAAVIYLRGISGIRAQT 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ P+ I V +LK P+ + ++ A V
Sbjct: 244 GSILALVEPVSGIFFDVTVLKNPLYISTFLGCVFILTAAYVIS 286
>gi|83953183|ref|ZP_00961905.1| membrane protein [Sulfitobacter sp. NAS-14.1]
gi|83842151|gb|EAP81319.1| membrane protein [Sulfitobacter sp. NAS-14.1]
Length = 325
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/316 (9%), Positives = 80/316 (25%), Gaps = 13/316 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ A L+ + + V + + +R ++ P + +
Sbjct: 1 MQSTTTEHRPGRAIALKLGAVFLFSVMAALIKIATATVPAAQAVFYRSFFAFPMIILWLW 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
LK + + + + G + L + F ++
Sbjct: 61 QSGDLRDGLKPSNLMGHVWRGVFGTTAMALTFAGLGLLPLPEVTAIGYATPLFTVIFAAI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA---YCFARKTIP 189
FLG RL+ + + ++I+ T+ + A I
Sbjct: 121 FLGEQVRVFRLSAVAVGLIGVLIVLYPRFTVGGDSVSQLAMLGAMMVVAASIMRALVQIH 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI---------GYGLLN 240
V ++ +L + + + P G++
Sbjct: 181 VRRLVQTDSTAAIVFYFSLTATCLSFLTLPAGMVINWEPLWWVNPGWQVSALLILSGMIG 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + +S + +Y + L ++ + + I G+V+
Sbjct: 241 GVSQIMITASYRFGPVSMLAPFDYASMLFAVLIGWVLFSEIPTPAILIGAGLVIAGGAAI 300
Query: 301 LLPTVINSGKNKTKKS 316
+ K+
Sbjct: 301 IWRERQLGLDRSKSKA 316
>gi|325521192|gb|EGD00081.1| hypothetical protein B1M_33297 [Burkholderia sp. TJI49]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/293 (10%), Positives = 75/293 (25%), Gaps = 2/293 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
S + +++ V W + + L ++ L++ + R + + +++
Sbjct: 6 SSSRDARQSLVAAGAVAFTIASWASAFPFIRIGLHGLTPLQLAASRFATAAVLIVAWLLW 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+D L+ + + L + A T +
Sbjct: 66 RRPRRPTKRDALRFLLCGLLGIALYNALLNTGEQTVSAGAASFIVNTLPIFTALLAAVFL 125
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L L +A + +I L G + A SA F + +
Sbjct: 126 GERFNRWGWLGSLVSLAGIAVIARGQPGGLVLGAGSTLILGAALCSASYFVLQRRLIPVY 185
Query: 194 EGFFIEMCVLAIPALFYVVW-NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L AL W G ++ + + +++ +
Sbjct: 186 GALTCTAYTLLAGALLLTPWLPGALAALGGDASRDTVWAVVMLGVFPAALGYATWTFALG 245
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y P + S+ + + + + + +V
Sbjct: 246 YFGAARAASFLYLTPAVATALSIALTGERPGIETVLGGLLAIAGVVFVAWRGR 298
>gi|313667830|ref|YP_004048114.1| integral membrane protein [Neisseria lactamica ST-640]
gi|313005292|emb|CBN86725.1| putative integral membrane protein [Neisseria lactamica 020-06]
Length = 284
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/276 (10%), Positives = 80/276 (28%), Gaps = 3/276 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + ++ + ++ R+L + V A G + +
Sbjct: 1 MFYQILALIIWSSSFIAAKYAYGGIDPALMVGVRLLIAALLVLPACRRHIGKIPREEWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A V + + V + A + L +
Sbjct: 61 LLIAAFVNYVLTLMLQFVGLKYTSAASASTIVGLEPLMMVFIGHFFFNDKAETHHWICGA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L++ G L + + + + + F + +
Sbjct: 121 AAFAGVALLMAGGAEEGGEVGWFGCFLVLLAGIGFCTAVRPTQRLIARIGAPAFTSVSIA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + L + + + +++ G+ R + G++
Sbjct: 181 AASLMCLPFSLALAQSYTVHWSWQGVVSLLYLGVGCSWYAYWLWNKGMSRVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P++ ++ +V IL + + V + +V+ A +V
Sbjct: 241 SLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 276
>gi|260901264|ref|ZP_05909659.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ4037]
gi|308106797|gb|EFO44337.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ4037]
gi|328470420|gb|EGF41331.1| putative permease [Vibrio parahaemolyticus 10329]
Length = 292
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/296 (8%), Positives = 87/296 (29%), Gaps = 12/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ + ++ + ++++ ++ + I R + +
Sbjct: 3 NSERKATVILVATTMIAALGWIFSKETIQGLPPFGFIGLRFTIASLCLLPLCY------- 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + ++ +F ++ + + V
Sbjct: 56 RPLKAARLKDVLAASGVGLLLGGAVMTWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMF 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++R + I+ + ++ L ++L G L A A F +
Sbjct: 116 QQRPQRIFWISLPIAVIGLACLSLAGGWKQSASQLWFLGAALILALHFNVNSKYSQKLPV 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + + + F + L S + + + G K +
Sbjct: 176 LLLTCVQLFSAGCLGLLVSFLMESRPEQVDSSIWWWFALSTLLATSLRYVMQTMGQKFVQ 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ +V S+ + + + + +++ ++V+Y K
Sbjct: 236 AGNAALIMILEPVWTVVLSILWYGEVLTANKLVGCLLILFSLVIYRTGGRFRFPKR 291
>gi|229194891|ref|ZP_04321674.1| Transporter, drug/metabolite exporter [Bacillus cereus m1293]
gi|228588595|gb|EEK46630.1| Transporter, drug/metabolite exporter [Bacillus cereus m1293]
Length = 310
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 99/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGLFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV
Sbjct: 63 QNIFQIWKHSRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVFITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFGQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + LI + + F +
Sbjct: 181 SLIKECGTTIVIGWGMLIGGIALLIFNRSFGWSQLSQTFTPKTFSTLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|188579984|ref|YP_001923429.1| hypothetical protein Mpop_0716 [Methylobacterium populi BJ001]
gi|179343482|gb|ACB78894.1| protein of unknown function DUF6 transmembrane [Methylobacterium
populi BJ001]
Length = 341
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 78/289 (26%), Gaps = 16/289 (5%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + L VS L + R +F + +
Sbjct: 43 WGANWPVMKLGLGHVSPLWFSALRFATGAACLFAWQAARGRVRR-----PRAADLPVIAS 97
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ + A+ ++ + TP+ V + + ER+ Q L
Sbjct: 98 IGLLQMMLFTALGAVAMTHLPAGRSAILSYTTPIWVVPVAVLVFGERIARRQWAGIGLAA 157
Query: 156 LSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L + I+ G + LA + W+A + +S +L
Sbjct: 158 LGVAILFNPHAIDWRDGTVLGAHAMLLAASAAWAACILHLRYGRSDASAAQLAPWQMLLA 217
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ + G + + +F FC + + S + +
Sbjct: 218 AAVLLPLALAVEGPFTGDGTATFWACLIFVGPIATAFGFCAVNAASRLVPSSLMSTLMLA 277
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P+ + + L + I +V+ + +P + +
Sbjct: 278 VPVTGLAIATATLHETPGPDLIIGALAIVLGIAASAVPARTAPQGGRRR 326
Score = 46.4 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 38/136 (27%), Gaps = 1/136 (0%)
Query: 165 SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL 224
P L L A+ + + +G + A A W G
Sbjct: 29 GSAPALLLGGAILLWGANWPVMKLGLGHVSPLWFSALRFATGAACLFAWQAA-RGRVRRP 87
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
+ L + + + I+ YT P+ ++ +V + + I
Sbjct: 88 RAADLPVIASIGLLQMMLFTALGAVAMTHLPAGRSAILSYTTPIWVVPVAVLVFGERIAR 147
Query: 285 VRTIVFGIVVIAMVVY 300
+ G+ + + +
Sbjct: 148 RQWAGIGLAALGVAIL 163
>gi|16077788|ref|NP_388602.1| efflux transporter [Bacillus subtilis subsp. subtilis str. 168]
gi|221308558|ref|ZP_03590405.1| hypothetical protein Bsubs1_04048 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312883|ref|ZP_03594688.1| hypothetical protein BsubsN3_04004 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317807|ref|ZP_03599101.1| hypothetical protein BsubsJ_03958 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322081|ref|ZP_03603375.1| hypothetical protein BsubsS_04049 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|6136689|sp|O31540|YETK_BACSU RecName: Full=Uncharacterized transporter yetK
gi|2633034|emb|CAB12540.1| putative efflux transporter [Bacillus subtilis subsp. subtilis str.
168]
Length = 330
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 17/295 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M + + A + G + + + + + + V R L + + + G
Sbjct: 24 KKQMGAYVSLAAAMAIVGSSVVVGKLMVERIPVFLSSGLRFLIASVVLLMLLFCIEKGFP 83
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +LV S T + + +Y + G + TP++ L L
Sbjct: 84 ALT----KKDVFVLLVQSFTGVFLFSICLLYGVQYTTGTESGILTSTTPMLIGILSFFLL 139
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKT 187
+E++ +I LL + ++ + L G L+ A+ A+
Sbjct: 140 REKIEKKTLIGILLAVCGVMAINLFGAGSQDGTPHALFGNMLIIAAVIGEALFTLMAKLL 199
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
P S+ + + S ++ + + L + F ++
Sbjct: 200 SPHISALAISTFVSLFGFLFFLPFALFEASSFDYSVPTVLDWSYVLYYALFVTVLAFYLW 259
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G+ + GI P+ ++ S ILK+P + V I V+ + V ++
Sbjct: 260 YSGVTKVPAGVSGIFTSVLPVSAVILSGVILKEPFEFVHFIGIACVIGGIFVTVI 314
>gi|323144331|ref|ZP_08078944.1| putative membrane protein [Succinatimonas hippei YIT 12066]
gi|322415888|gb|EFY06609.1| putative membrane protein [Succinatimonas hippei YIT 12066]
Length = 305
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 97/301 (32%), Gaps = 20/301 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G + V ++WG T + T+ L+ + +E+++ R L ++
Sbjct: 1 MENKEVLGHVAVLLTILIWGTTFISTKVLLQFFTPVEILAVRFLLGYCALYIIY------ 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + L + +++ AL + P+ +V L
Sbjct: 55 -PRRLKGMSFKQELICLFAGMCGICLYYLCENIALSYTLASNVGVLICLAPLFTVILSRF 113
Query: 138 FL--KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFAR 185
F KE++ I ++ +++++ + + I +S
Sbjct: 114 FKLKKEKIGISFCIGCVIAFGGVVLISFDNQSVEFNFIGDCLAVLAALIWAIYSLLTKKL 173
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + I L FS + FL ++ F
Sbjct: 174 GEFGINTILLTRRVFFYGLIFILPLSFVFDFSLNQDLLFKPEVYFNFLFLGLGASALCFV 233
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++ +K + Y P++ +++SV IL + + I + ++ + + +
Sbjct: 234 TWNFAVKILGAVKTDVYIYAVPVITVITSVLILHEVVTVKILIGLALTLLGVFIAEEHGL 293
Query: 306 I 306
Sbjct: 294 R 294
>gi|228899129|ref|ZP_04063401.1| Transporter, EamA [Bacillus thuringiensis IBL 4222]
gi|228860570|gb|EEN04958.1| Transporter, EamA [Bacillus thuringiensis IBL 4222]
Length = 327
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 98/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S + F
Sbjct: 25 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFLLSGVMLLFFFKVLGKN 84
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 85 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 139
Query: 138 FLKER-LNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
K+ LN ++I + +++ ++ H GI L L A +Y
Sbjct: 140 VYKDDALNMRKLIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 199
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 200 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 259
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 260 TIMKYNKVGKVSMYMFFIPVFSVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 319
>gi|154494933|ref|ZP_02033938.1| hypothetical protein PARMER_03977 [Parabacteroides merdae ATCC
43184]
gi|154085483|gb|EDN84528.1| hypothetical protein PARMER_03977 [Parabacteroides merdae ATCC
43184]
Length = 309
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/310 (11%), Positives = 98/310 (31%), Gaps = 23/310 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
G L + A +LWG ++ + ++ + + + R+L + + A ++
Sbjct: 1 MKSEAYKGHLAMLMANVLWGCMSPSSKIVLSSGLINAISLTTFRMLGAAIVFWIASIFTR 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + + G +I+ + + TP+I++ +
Sbjct: 61 K------EHVPHEDLKHLFFAALFGIVFNQGTYIFGVSQTSPIDATIVATSTPIITMIIA 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS--------------GIPLLSLAIAVTWSAY 181
+ +LKE + +I+ + L + L G L +A
Sbjct: 115 AFYLKEPITGTKILGIFVGAAGALTLILSGQQTAVTGNGSNNVWGDILCLIAQCSFSIYV 174
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ I S M + +N + + L +
Sbjct: 175 VVYKGLIGRYSPVTLMKWMFTYSAICTIPFSYNSVASIDFATLPLDIYLNIAVVVLGGTF 234
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F + + G + + + + Y P++ + +V + +++I +V + + +
Sbjct: 235 FAYLLVPIGQRILRPTVATMYNYVQPIIASIITVIVGLDTFGLMKSIAIALVFLGVYIVT 294
Query: 302 LPTVINSGKN 311
K
Sbjct: 295 RSKSKEQLKQ 304
>gi|300904864|ref|ZP_07122687.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 84-1]
gi|300403197|gb|EFJ86735.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 84-1]
Length = 294
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 96/296 (32%), Gaps = 16/296 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +WG T + T Q+L S + V R L + + + +
Sbjct: 8 LLFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALPAGLLLVMIV----------RQIP 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + A +++ W ++ G + + V P++ VF+ + L +
Sbjct: 58 TGIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLMVVFISAALLGSPIRL 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-----SAYCFARKTIPVGSSEGFFIEM 200
+ ++ A+ + ++ L L + +A A+
Sbjct: 118 MAVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAGSMAFGTVLTRKWQPPVPLLTFTA 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LA L V + + ++ GI R + + V
Sbjct: 178 WQLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAGLTYFLWFRGISRLEPTVVS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++ + +P ++ L Q + ++ I +V+ ++ + + +KS
Sbjct: 238 LLGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWLGQRSNRTPRARIACRKS 293
>gi|327481142|gb|AEA84452.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 291
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 79/281 (28%), Gaps = 3/281 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ L + +++G++ + + E S L + R L+++ + +L
Sbjct: 1 MTPRNALLAIHLGALMFGLSGVLGKLAES-SALVITFGRALFAVLALLLVAQLLRPSGAL 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ A+G L+ A L I + SF V+ L
Sbjct: 60 PSWRQRAGLALGGLLLGAHWLTFFIAVKIAGVGIATLGFASF--PAFTVLLEGLLFRERT 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + +L + P L V + + G
Sbjct: 118 RAVEFAMVGLVTAGLLLVAPTFDLGNGPTTGLLYGVLSGLLFALLSLLNRAVTRGLDPVR 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + F G + + L +F ++ K T
Sbjct: 178 SALWQNLAIFAGLLPFCGAAIPTIPAQDWLWLALLGVLCTGLAHSLFVASLRVLKARTTS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ P+ I + ++ + I +++IA V+
Sbjct: 238 VIFALEPVYGIAFAWWLFNEQPTLRMLIGGALIIIASVITS 278
>gi|310826655|ref|YP_003959012.1| putative transporter [Eubacterium limosum KIST612]
gi|308738389|gb|ADO36049.1| putative transporter [Eubacterium limosum KIST612]
Length = 341
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/311 (11%), Positives = 90/311 (28%), Gaps = 20/311 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + G ++ +L + + + + F ++ LL
Sbjct: 12 GIFLACSSAVATGTFGIFLHYLSAFGLSDDTVTLIGPVFMFIAFLLIALIKDRRLLLAPK 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K ++V + ++ ++ + S +F ++ VFL + K+++
Sbjct: 72 KLYYFTMIVVSGFVLYPLYNFTYVRVFANLPMAIASLFHFSNSIVLVFLMRILFKQKITK 131
Query: 146 LQIIAALLIILSLLIM----------------TLHSGIPLLSLAIAVTWSAYCFARKTIP 189
++I +L I+ ++++ GI Y I
Sbjct: 132 EKLICCVLAIVGIMLVLQVITFGAVAPDDSVPITSMGIFWGVAVACALAFVYSIDYFHIS 191
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
L + + N + G++ + +I L+ V Y
Sbjct: 192 HDVPVITTQIYACLCSSIILLITSNPAAVGQNIMESVSANGAIVIVVALVYCAVLMWSYY 251
Query: 250 GI----KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
I S + P + + IL + + ++ + I V A+V
Sbjct: 252 SITACYNYIDASYGALTFVLEPSVAAILGFIILHETLTPLQMLGIAIAVCAIVYMQYSEG 311
Query: 306 INSGKNKTKKS 316
++
Sbjct: 312 KREKAELAAQA 322
>gi|332970525|gb|EGK09514.1| hypothetical protein HMPREF9374_2966 [Desmospora sp. 8437]
Length = 306
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 81/286 (28%), Gaps = 7/286 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + ++WG+ + + ++ + L + S R+ + + +++ +
Sbjct: 1 MTKRAVYLIMTFNMLVWGLNTVALKVLVQYLPPLTMQSLRIFLAGLVLLPFLLFRNRWHP 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + + G + L + VFL
Sbjct: 61 PKAGQWRHLAGAILFGVVGHHSCLALGLEQTSATNAALILGLVPLTTALMAVVFLRDRIS 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
R + + + + L T G + L + + + I + +
Sbjct: 121 WMRGAGILLGFLGVAFVVLRGSTGLGGHTVGDLWVLGAMATQAASFIYIKKATDTLDAKQ 180
Query: 200 MCVLAIPALFYVVWNGFSGGEH------FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L V++ + LF + +++ I R
Sbjct: 181 VTALMFLTGSVVIFIISLFLDPKGLVQAMDTPAWVWGLFFASGVIATGLGHMLYNSSIHR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P ++ S F L++ I + F ++ + +
Sbjct: 241 LGPGQSAIFINLTPFFALMGSSFFLQETIHLSQIAGFFLIAAGVFL 286
Score = 37.2 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 10/133 (7%), Positives = 34/133 (25%), Gaps = 1/133 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+ + + V ++ + + L + +
Sbjct: 10 MTFNMLVWGLNTVALKVLVQYLPPLTMQSLRIFLAGLVLLPF-LLFRNRWHPPKAGQWRH 68
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ G+++ + ++ PL + +V L+ I +R
Sbjct: 69 LAGAILFGVVGHHSCLALGLEQTSATNAALILGLVPLTTALMAVVFLRDRISWMRGAGIL 128
Query: 292 IVVIAMVVYLLPT 304
+ + + +L
Sbjct: 129 LGFLGVAFVVLRG 141
>gi|331004181|ref|ZP_08327661.1| hypothetical protein HMPREF0491_02523 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411591|gb|EGG91001.1| hypothetical protein HMPREF0491_02523 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 288
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 93/292 (31%), Gaps = 5/292 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +F A WG ++ + L VS +++ R ++ + Y
Sbjct: 1 MNKEKFKAFFALFIATFFWGSAYIFVKQLLNNVSPYMILALRFCFAAIILIII--YNKRL 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + TLK +G+ +F + + + + +
Sbjct: 59 LKINLKTLKAGIIMGIFLFGEFFTFTVGLQYTTTSRSSLLIASYIILLPFAYLIIKKKIP 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + + + + + IIL + + H G + + A+ + +
Sbjct: 119 SVSDIIVSILCMIGVFIILGNDLGSFHLGD--IYCVLCAVIYAFYIVISSKYSKRYDSGI 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ A+ ++ F + + F + YG+K +
Sbjct: 177 LNVLQVSTTAILSILVLFLFKDNRFIFTISDSLQLIYLIVFCTTLPFFLILYGMKYVSAT 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T GI+ +L V + +L + I I++ + ++ L I+
Sbjct: 237 TSGILLSFESVLAAVMGIIVLHEAFTLNLFIGGVIIIFSFILSELLPKISKK 288
>gi|291165844|gb|EFE27891.1| integral membrane protein DUF6 [Filifactor alocis ATCC 35896]
Length = 294
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 98/291 (33%), Gaps = 11/291 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ ++ + + + WG + + Q L+ + + + R L S +F +
Sbjct: 1 MQPKDNQKVLALMLLLFTCVAWGGSYVSIQICLDAMGPVYLPFFRYLLSAVLLFVVLKGK 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L L + + V++ F A+ + + P++++
Sbjct: 61 GMSLRLEASDWVKVGL-----TALFSITVYFYFENSAIKKIGANEAAILVAMLPIVALIG 115
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-----PLLSLAIAVTWSAYCFARKTIP 189
+FLK++L +I+A++ I+ + + + ++ +
Sbjct: 116 NRIFLKQKLLRRNVISAVISIVGIYFVIGGVQFGQNKLGYFYIFLSNLSWSAYLINTKPL 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ +G + I +L ++ + FL + ++ +++
Sbjct: 176 LKKYDGLVLTFYQCLIGSLAFLPALPMDYFYIDKITTGIILHFLFLALICSAVCTVCYTF 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
IK + + P+ S IL++ + ++ I + + +++
Sbjct: 236 AIKHCGVGISALCLNFIPVATFFFSFLILREVMRPIQLIGAFVAISGLMLM 286
>gi|294340757|emb|CAZ89149.1| putative permease [Thiomonas sp. 3As]
Length = 311
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 76/291 (26%), Gaps = 6/291 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S ++ + + A ++WG + T + V R + V +
Sbjct: 2 STSPASLRASALMLLASLIWGTAFVAQTASIGTVGPFYYTGLRFMLGAAVVLAVMALRRR 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++A+ L + F V+ V L
Sbjct: 62 PDPAAHPASNPRSLLRDGGLLGGVVAISISLQQIGLESTTVANAGFI-SSLYVVLVPLLG 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGS 192
+ R+ + ALL + +++ G + +
Sbjct: 121 LLWGRRVGAGVWLGALLAASGMYFLSVRQGYSVRHGDWLELGGALFITVQLLLLGRMAPR 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + L + G L + + +
Sbjct: 181 HDPLQLAVVQFVVCGLLCLGAGVLVESISLEALQRAAWTIFYGGALSVGVAYTLQVVAQR 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
A + ++ + +++ +L Q +D +V ++V LP
Sbjct: 241 HAVPAHAAVIFSMEGVFAALAAWLVLHQSLDARALFGCALVFSGLLVSQLP 291
>gi|257462642|ref|ZP_05627052.1| hypothetical protein FuD12_02239 [Fusobacterium sp. D12]
Length = 301
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/286 (11%), Positives = 87/286 (30%), Gaps = 5/286 (1%)
Query: 28 LFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ F A W + T+ + Q+S +++ R ++ + + L +D
Sbjct: 14 FYAFLAVFFWASAFVSTKIVLQSGQLSAMDLGMLRYFFAGILLIPLAFFCKIRLPNSRDL 73
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K + + +A + + + + T + +
Sbjct: 74 PKFAISGILGY-TAYMFFFNTASTMISPSTASVINAVCPGLTAVFAYFLFSEKISWKGIL 132
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L I ++ LSL + I +L + +A + + V L
Sbjct: 133 GLFISFVGILFLSLWNASFSLNIGVLYMFVAAICLSMYNISQRSFVQRYNAMETMTYCLL 192
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA-KLSTVGIME 263
+ F + +G S L + + + ++ ++ K S V
Sbjct: 193 AGSFFLFLCHGKSLLLLPRLSQQMWRHLIYLAMFPSILSYYCWAKAMQSCRKTSEVTNFM 252
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P++ + S ++K+ +++ M+++ +
Sbjct: 253 FVTPMIATLLSFLMIKEFPTWSSYFGGALILSGMILFQMEKNKKIR 298
>gi|269925498|ref|YP_003322121.1| protein of unknown function DUF6 transmembrane [Thermobaculum
terrenum ATCC BAA-798]
gi|269789158|gb|ACZ41299.1| protein of unknown function DUF6 transmembrane [Thermobaculum
terrenum ATCC BAA-798]
Length = 310
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 85/283 (30%), Gaps = 14/283 (4%)
Query: 27 TLFVFCA-YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
L A Y++WG T L +F L L + R L + ++ + +
Sbjct: 25 ILLALLAVYLIWGSTYLGIKFALSSFPPLLLGGIRFLIAGSVLYIWLRFQGHSKP----- 79
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +L + + + + + +
Sbjct: 80 --TREQWLSCALVGALLLLIGNGGVGFAEQNVASSLVALVIAATPLWAAIFLSLMGRKPG 137
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIE 199
L+ I + L + ++ L + ++ A+ ++ +
Sbjct: 138 KLEWIGLTIGFLGVALLNLDGQLRSEPISAAIVIASSICWSFGSVISQRLSIPSGLMASA 197
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L AL ++ + + + + F +S+ ++ + S
Sbjct: 198 CEMLTGGALMLLIGLILGEKISLPITFEASVAIIYLTMIGSLVGFTAYSFLLENVRPSLA 257
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y P++ ++ FI + I + + ++++ + + ++
Sbjct: 258 TSYAYVNPIVAVILGAFIGNEHISPMIIVSMPLIILGIAIVVM 300
>gi|224538170|ref|ZP_03678709.1| hypothetical protein BACCELL_03061 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520216|gb|EEF89321.1| hypothetical protein BACCELL_03061 [Bacteroides cellulosilyticus
DSM 14838]
Length = 303
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/308 (12%), Positives = 104/308 (33%), Gaps = 18/308 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +F A ILWG+ + L + S L V + R++ + + +
Sbjct: 2 NKNVQGHIFALTANILWGLMAPIGKSALMEFSALSVTTFRMVGAAACFWLLSAFCKY--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + S L + G +I+ L S P++++ + +++L
Sbjct: 59 ---EHVDHRDMLKIFFASLFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTMIIAAIYL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTI 188
KE + +L+++ + + L + L S G L +A +
Sbjct: 116 KEPITNLKVLGIFVGAMGALTLILSSQATSNGNSSIIGDLLCLVAQISFSIYLTVFKGLS 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S M + A ++ +G + + + +
Sbjct: 176 QKYSPITLNKWMFIYASMCYIPFSYHDVAGIQWTEISTAAYVQVGYVVIGGSFLAYIFIM 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + V + Y P++ ++++ + + + +V + + +
Sbjct: 236 TAQRLLRPTVVSMYNYMQPIVASIAAIIMGLGVFGWEKGVAIALVFLGVYIVTKSKSKAD 295
Query: 309 GKNKTKKS 316
+ + KK+
Sbjct: 296 FEKEGKKA 303
>gi|254472757|ref|ZP_05086156.1| possible transporter, RhaT family, DMT superfamily [Pseudovibrio
sp. JE062]
gi|211958221|gb|EEA93422.1| possible transporter, RhaT family, DMT superfamily [Pseudovibrio
sp. JE062]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 96/294 (32%), Gaps = 9/294 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV 72
+S A G L++ A ++ I ++L VL+V+ R+ + L + +
Sbjct: 5 VSHAPAQGNVKYGILWMVAAMFMFVIVDSVGKYLSLSYPVLQVVWGRMFFHLLFMLIFM- 63
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ T+ P ++ A ++ V + A ++P++
Sbjct: 64 ------APRVKTMMVPNNGSVVYLRAVLVLVMTIGSVAAAQLIPVATLHAIALLSPMMVT 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ L E++ + + L+ + L++ L A+ + ++ I
Sbjct: 118 AMSVPILGEKVGLRRWTSILVAFVGALLIVKPGADVLDLGALIAVATIVVYSAGHIVARY 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ F VL AL V + ++ L G ++
Sbjct: 178 ASKFDTPSTVLFHTALLGAVVTTLFTPYFWQAPDMEGWALLALIGAVSGLGHYAIVKAFS 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ST+ Y++ + ++ + + DT+ I+ +Y+
Sbjct: 238 FGEASTIAPFSYSSLIWAMLIGLMFFGEFPDTLTLAGAAIIF-GSAIYMWHREK 290
>gi|254420311|ref|ZP_05034035.1| Integral membrane protein DUF6 [Brevundimonas sp. BAL3]
gi|196186488|gb|EDX81464.1| Integral membrane protein DUF6 [Brevundimonas sp. BAL3]
Length = 311
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 81/294 (27%), Gaps = 14/294 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G A + + + L+ V E++ +R + LP V ++ GGL+ L
Sbjct: 12 RGIALRIAAAGAFSVMSAVLKLASLDGVVAPEMLFYRAFFGLPVVLAWVLTQPGGLAGLT 71
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + V L + F P+ + L LKE
Sbjct: 72 TR-----RPWAHAGRSALGVVSILCLFQTLTLLPLADATTLSFTAPIFATILSFFILKEA 126
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIPVGSSEG 195
+ + A + + ++I+ +A A TI +
Sbjct: 127 VGPRRWAAVAVGFIGVVIVMRPLSFVSGGGHAMPLEGIGFGLMAALLTASVTITLRQLRD 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + + LI G+ + +++A
Sbjct: 187 TEHVAAIVFWFFVGSSGVGAILLPFVGHWHSPLTFALLISSGVAGGLAQLFMTASLQKAP 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ V +Y + ++ +++ ++ + + +
Sbjct: 247 VAVVAPFDYLQIVGAVIFGWWLMHATPTANTLAGGALIAASGLYTAWREHVRRK 300
>gi|167583870|ref|ZP_02376258.1| hypothetical protein BuboB_00952 [Burkholderia ubonensis Bu]
Length = 307
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/288 (10%), Positives = 78/288 (27%), Gaps = 6/288 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + L + A +WG + + L+ + R L + +
Sbjct: 1 MTPTARQHLRANLLMLGAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLALN 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L + P + + +LA L + F V+ V L
Sbjct: 61 AASRTHLAALRRAPALLLPGLALGALLATSISLQQIGLQYTRIANAGFI-SSLYVVLVPL 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL----LSLAIAVTWSAYCFARKTIPV 190
VF + R+ ALL + L +++ + A
Sbjct: 120 MGVFARHRIGAGTWFGALLAAIGLYFLSIDEHFSILYGDWFQLAGAVIIAAHVMAVGHLA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + A + + + + L G L + +
Sbjct: 180 RRHDPLVLAFLQFATCGVLCLAVGLAVEPLNGAMLRGALPTLLYGGLLSVGVGYTLQVVA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ A + ++ + ++ L + + + +++ ++
Sbjct: 240 QRDAAPAHAAVIFSMEGVFAAIAGWAALGETLTLRALVGCALMLAGLL 287
>gi|298695954|gb|ADI99176.1| rarD protein [Staphylococcus aureus subsp. aureus ED133]
Length = 254
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
+ ++ ++WG FI+A+ TS Y++ P++S+ L +FLKER N + +A L +
Sbjct: 35 AGYVITLNWGTFIWAVTNGHVLQTSLGYYINPLVSILLALIFLKERFNKFEWLAILFAFI 94
Query: 157 SLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
+L MTL G P++S+ +A+++ Y +K + + + IE V A L YV++
Sbjct: 95 GVLYMTLKIGEFPIVSIILALSFGTYGLLKKVVHIDAISSITIECIVTAPAGLIYVIYLW 154
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
F L L G + +FS G KR LS +G ++Y P +M V +
Sbjct: 155 QQHQMSFGLNMSSFWLLFSGAIT--AIPLILFSAGAKRIPLSLIGFIQYVGPTIMFVLGI 212
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
F+ K+P + I F + +V+Y L I K+ K+
Sbjct: 213 FVFKEPFSIDQLITFIFIWTGIVLYSLSQYIKLKKHPVAKT 253
>gi|229032075|ref|ZP_04188056.1| Permease of the drug/metabolite transporter [Bacillus cereus
AH1271]
gi|228729215|gb|EEL80211.1| Permease of the drug/metabolite transporter [Bacillus cereus
AH1271]
Length = 315
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 90/302 (29%), Gaps = 17/302 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 14 YIIMLLVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTSL 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 70 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 129
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ + ++ ++++ G L A+ +K + S
Sbjct: 130 KVGISLIFSLVGVIVVITGGSMRILMSLSFNKGDLLFIAALTCGVLYSLTGKKVMSGVSP 189
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 190 LLTTMSMTVLGTVFLAGLSLYEDGWGKVATFSLQGWIEMLYMVVCGTLVGYIVFNKGVEE 249
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S + P++ SV + + + + IV+I + + + + K
Sbjct: 250 LGASKASMYLNLTPIVATGISVILYGAAVTWQQIVGMIIVLIGVYIATVQSNKGIKKFSR 309
Query: 314 KK 315
+
Sbjct: 310 NQ 311
>gi|229084041|ref|ZP_04216336.1| Transporter, EamA [Bacillus cereus Rock3-44]
gi|228699259|gb|EEL51949.1| Transporter, EamA [Bacillus cereus Rock3-44]
Length = 302
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 90/275 (32%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ +F + L + + +L+
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAVLCLFPIV-----WLKEKRLFPPRAAILPLLI 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T + + F AL + + S+FLKE++N QI++ +L
Sbjct: 71 MGVTGVVLFNIFQFLALEQTSATNVGLISTLNAISIALFSSLFLKEKINRFQILSMILSF 130
Query: 156 LSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+L++ IA ++ + + + +
Sbjct: 131 FGVLLVLSKGNIALLFSLQFNSGDLWMIAAVCIWGIYSVCSKWATKTTSPMMATLYSGVF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVMILLPFNMPDFTVSHIDASFITSLLYTGLISTVVCMVFWNIGVQKLGATTAGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + V+ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEALTWVQILGTVIVVSGCYLFS 285
>gi|225574910|ref|ZP_03783520.1| hypothetical protein RUMHYD_02989 [Blautia hydrogenotrophica DSM
10507]
gi|225037878|gb|EEG48124.1| hypothetical protein RUMHYD_02989 [Blautia hydrogenotrophica DSM
10507]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 88/295 (29%), Gaps = 8/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +++ + + + ++ + ++ R L + + S
Sbjct: 4 NQKYKGIIYIIISAFCFALMNMFVHLAGDLPSVQKSFFRNLVAFFFAVIIMARKRIWFSG 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + A V YA+ S ++P +V + LK
Sbjct: 64 KKENIAPL------FYRAIFGTVGILCNYYAVDHLVLADASMLNKMSPFFAVIFSYLILK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER+ +Q +A + L + + G+ L I + T E
Sbjct: 118 ERVKPVQALAVGGAFIGSLFIIKPTVVGMDLFPAVIGLLGGLGAGIAYTFVRYLGERGEK 177
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F + + ++ L+ GL + + A
Sbjct: 178 GPFIVCFFSGFSCLVTLPFLLFDYHYMSLSQIGILLLAGLSAAGGQFSITAAYCCAPARE 237
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + +Y+ + + I Q D + + + ++ V+ L N K
Sbjct: 238 ISVYDYSQIIFSATLGLIIFGQIPDWLSWVGYLVICSMAVMMFLYNQKNDRVLKK 292
>gi|150403486|ref|YP_001330780.1| hypothetical protein MmarC7_1571 [Methanococcus maripaludis C7]
gi|150034516|gb|ABR66629.1| protein of unknown function DUF6 transmembrane [Methanococcus
maripaludis C7]
Length = 303
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 107/297 (36%), Gaps = 13/297 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++ + GT + + + +GI P T++ + + + R L + ++ + +
Sbjct: 5 SYTMNKVKGTAYTMYSSVAFGIMPFLTKYAYDGGANAVTTLMLRFLIAGLILYVFLKFKK 64
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + K V +L + A + A++ F A + + + +F+ PV L
Sbjct: 65 ISLKISK-----HNFVEILFYGAFLYALNTVFLYEAYNSIPTGVATTLHFIYPVTVTLLM 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVT----WSAYCFARKTIP 189
KE++ + A + L + + + G + + +A ++ Y +
Sbjct: 120 ISIFKEKMGINKAFALIFSFLGMYCLVGGNCAGFDIYGVLLAAGSGLVYAGYIVSAGKCK 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + ++ ++ F+ + I F
Sbjct: 180 YSKIDSYVTIFYLSILSSVLLFIYGIFTNTLTLNMAFSSYASIGIISIFCTVLALIAFLE 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
GIK S I+ P++ I+ + +L + + ++++++++ +
Sbjct: 240 GIKLIGPSNTAILSTLEPIVSIILGIILLNELMSVKIGFGSILILMSVIIVTVEKSK 296
>gi|284009287|emb|CBA76419.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 305
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 98/285 (34%), Gaps = 13/285 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M LF A +LW I + ++ + + +R L + + ++ +
Sbjct: 1 MKNFLFPLLAVLLWSINAVVSKAAANVIDPAAISFYRWLLAFLILTPFMI----KGIIKN 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
T+ + + A + ++ YA T V P+++V L L+
Sbjct: 57 RTVLRQYGWKLFILGALGMVLYQSLAYYAAHTVSATFMGVLNSVIPLLTVILSIFVLRTI 116
Query: 143 LNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+I +LL ++ L+ + GI L + + +Y +
Sbjct: 117 PTIGIVIGSLLSLMGLIWLVSQGEPMLFFSQGINRGQLLMFIAALSYSLYGVLTKHWAIP 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + I ++ F + + L L + ++ G+ R
Sbjct: 177 LPNWQSLYIQISFAVLLLLPNFLLAKTVAITAANINLILFAGIAASLIAPYLWIQGVFRL 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+T I AP+ + +V LK+ + + I GIV++ +++
Sbjct: 237 GANTTSIFMNLAPVFTAIIAVLFLKEKMHSYHLIGGGIVLLGVIL 281
>gi|257452797|ref|ZP_05618096.1| transporter [Fusobacterium sp. 3_1_5R]
Length = 297
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 80/300 (26%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + +WG + ++ + + R S V I
Sbjct: 2 NQFLLGNGALLLTSFIWGSAFVAQVTGMDLIGPFTFSASRCFLSTLFVLALIFLQKE--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
KD K + + L + L TSF + V+ LG F
Sbjct: 59 --KDDTKMKDLLFGGIACGLFLFLGSSCQQVGLQYTTAGKTSFITSLYIVLVPLLGIFFK 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
K+ +N +A L + L ++ + + + + A
Sbjct: 117 KK-VNLFTWMAVFLGTVGLYLLAMSGLTEGANINKGDFFVFLGSFFWAGHILVIDYFTKK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ A+ L + + G K
Sbjct: 176 VNPIKLSCLQFAVTTCLAAFVALSIETPTLPNIFASWKSIAYAGILSGGIAYTLQIVGQK 235
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ + ++ +L + + + I+ IA++V +P+ + K
Sbjct: 236 HTTNTTLASLILSLESVFGAIAGFIVLHERLKPSEILGCIIMFIAILVAQIPSDLFQKKK 295
>gi|254502004|ref|ZP_05114155.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222438075|gb|EEE44754.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 303
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 90/307 (29%), Gaps = 8/307 (2%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLW 62
A + K S + + G + A + + + ++L + L+++ R +
Sbjct: 2 SAGSGQGQKHGSGAANTTAPIAGIGLIILACLCFSVLDATAKYLSASLPTLQIVWVRFVS 61
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+ + G+ + A L F A+ Q T
Sbjct: 62 HVVLALVLFQVWR------SPQYLRTDRWGLQIVRAFCLLGTTIFNFLAVRYLQLAETMS 115
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC 182
F P + L FL E + A ++ + +L++T L + +
Sbjct: 116 IMFAAPFVITALAGPFLGEWAGIRRWAAIVVGFIGVLVVTRPGLGGLHWAVVYSLAAMTF 175
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD-TLFLIGYGLLNS 241
+A + +L I + V G + N LI G L
Sbjct: 176 YAVYALLTRKLAATESSAGMLIISGVVAAVAMAPVGISVWQEPNGLWEWTLLIATGALGG 235
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+F + A + + Y + MIV I + IVV + + L
Sbjct: 236 GGHFLFILAHRMAPAPVLAPLIYVQIVWMIVLGYLIFDDVPIVTTILGASIVVASGLYIL 295
Query: 302 LPTVINS 308
+ +
Sbjct: 296 YREQVKA 302
>gi|218895636|ref|YP_002444047.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
G9842]
gi|228963674|ref|ZP_04124818.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar sotto str. T04001]
gi|218540988|gb|ACK93382.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
G9842]
gi|228796022|gb|EEM43486.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 308
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 99/294 (33%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLTKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + + + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIITALTGTYFIITNGSIENVVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + + F + LI + + F ++
Sbjct: 183 ACGTTIVIGWGMLIGGIALLICNSSFGWSQLSQTFTPKTFSMLILIIISGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 296
>gi|126728499|ref|ZP_01744315.1| hypothetical protein SSE37_20952 [Sagittula stellata E-37]
gi|126711464|gb|EBA10514.1| hypothetical protein SSE37_20952 [Sagittula stellata E-37]
Length = 297
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 90/297 (30%), Gaps = 6/297 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L++ + + +GI + + + + V + L + +Y +
Sbjct: 4 NLRGALWMMLSMLGFGIEDAFFKAATRTGGVSAGVATVQFGLLAMALYALYARQQGVPVW 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + V FF +L TS P++ + + L E+
Sbjct: 64 TAEYLKPRLLIR---TAFEIVGRLFFALSLAYTPLSTTSAILQAAPLVVMLGAGLILGEK 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + +L++ + AI FA + + ++ +
Sbjct: 121 IGPRRWAAMAVGFAGVLLIVRPTPDAFQPNAILAILGMIGFAGRDLATRTAPMHVHAAQL 180
Query: 203 LAIPALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + L G + + ++ ++ ++S V
Sbjct: 181 GVLGFAVVTFAGLVIVAFEPGAPALPSPQAATLLCGTAIAGVIGYTAITFAMRTGEVSVV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
Y ++ ++ + I + DT+ ++V A L+ KS
Sbjct: 241 APFRYFRLIVALILAYSIFGERPDTLTLAGAALIVGAGTYSLIRDGRRRKTAPLAKS 297
>gi|187926387|ref|YP_001892732.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii
12J]
gi|241665874|ref|YP_002984233.1| hypothetical protein Rpic12D_4318 [Ralstonia pickettii 12D]
gi|187728141|gb|ACD29305.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii
12J]
gi|240867901|gb|ACS65561.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii
12D]
Length = 305
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 84/292 (28%), Gaps = 15/292 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G L++ A +L G T ++ + + + R +LP +
Sbjct: 2 SKLSNRLEGCLYLALAMVLVGSTVAASKIIAAGLPPFTATALRFAMALPMFLVIMRMTRT 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L V + + +A + I L PV+S +
Sbjct: 62 RWPVL----ARRDWVLLFLQAAAGSVGYTTLLISGLRHTSAADAGVIVGTLPVMSALIAI 117
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARK 186
V L ER + A L +L + L + ++ + R
Sbjct: 118 VLLGERPGRAVLGAIGLATAGVLAIALQPRGDATHPLLGNLLVMGAVVCEGLFILLNKRL 177
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
PV + + AL +W + F +
Sbjct: 178 RTPVPPLALSALMSAFGLLTALVPALWEAPWQLHASVQTTHALMAVAYYAIVPTVGGFML 237
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G R + + AP+ ++ + +L + + T + V+ ++
Sbjct: 238 WYTGAARVSGAEASLFTALAPVAAVLFAATLLGEAVSTRQVGGIACVLAGVL 289
Score = 36.8 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 12/110 (10%), Positives = 34/110 (30%)
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
F A+ ++V + L L + + + G++
Sbjct: 35 LPPFTATALRFAMALPMFLVIMRMTRTRWPVLARRDWVLLFLQAAAGSVGYTTLLISGLR 94
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ G++ T P++ + ++ +L + G+ ++ L
Sbjct: 95 HTSAADAGVIVGTLPVMSALIAIVLLGERPGRAVLGAIGLATAGVLAIAL 144
>gi|121596913|ref|YP_991066.1| hypothetical protein BMASAVP1_1470 [Burkholderia mallei SAVP1]
gi|226195630|ref|ZP_03791217.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9]
gi|242311765|ref|ZP_04810782.1| putative membrane protein [Burkholderia pseudomallei 1106b]
gi|251767870|ref|ZP_02268652.2| putative membrane protein [Burkholderia mallei PRL-20]
gi|254203038|ref|ZP_04909400.1| putative membrane protein [Burkholderia mallei FMH]
gi|254208370|ref|ZP_04914719.1| putative membrane protein [Burkholderia mallei JHU]
gi|121224711|gb|ABM48242.1| putative membrane protein [Burkholderia mallei SAVP1]
gi|147746083|gb|EDK53161.1| putative membrane protein [Burkholderia mallei FMH]
gi|147751057|gb|EDK58125.1| putative membrane protein [Burkholderia mallei JHU]
gi|225932115|gb|EEH28115.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9]
gi|242135004|gb|EES21407.1| putative membrane protein [Burkholderia pseudomallei 1106b]
gi|243061482|gb|EES43668.1| putative membrane protein [Burkholderia mallei PRL-20]
Length = 323
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 69/279 (24%), Gaps = 6/279 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L + R L + + + + +
Sbjct: 38 IWGSAFVAQRLSLAVIGPFLFTGLRFLLGAAVLVPLLCANGAARAHCATLARERTRLLPG 97
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +LAV L + F + V+ +G F + ALL
Sbjct: 98 LALGGLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPVIGVFFRHRT-GIGTWLGALLA 156
Query: 155 ILSLLIMTLHSGIPL----LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L +++ + + A+ V + + +
Sbjct: 157 AIGLYFLSVDAHFSMLYGDWFQLAGAIVIAFHVIAVGHLVRRHDPLVLSFMQFVVCGALC 216
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ L G L + + + A + ++ +
Sbjct: 217 LALGLAIEPLDRATLTRALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 276
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ L + + +++ ++V L
Sbjct: 277 AIAGWAALGETLSLRALAGCALMIAGLLVCQLLPGHARR 315
>gi|56698376|ref|YP_168749.1| hypothetical protein SPO3554 [Ruegeria pomeroyi DSS-3]
gi|56680113|gb|AAV96779.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 298
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 94/299 (31%), Gaps = 6/299 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ +G + A +++ + ++ L + V+ R + V
Sbjct: 5 TARAQQNNIPVGIALMLAATVVFALQDGISRHLASSYNTYMVVMIRYWFFAAFVIALAAR 64
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
GGL G+ +F +LA ++A + + P++
Sbjct: 65 SRGGLRAAT----RTAQPGLQIFRGLLLASEICVAVFAFTVLGLIESMAVFICYPLLVAA 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L L E++ + A + ++ +LI+ A+ SA FA + +
Sbjct: 121 LSGPVLGEKVGWRRWAAIGVGLVGVLIILQPGMGVFNPWAVVPLISALMFALYGLLTRYA 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V G + + PD ++ + + + +
Sbjct: 181 ARQDSTATSFFWTGVTGAVAMTAVGLWFWEPMSAPDWRWMALLCVSGALGHWLLIKCYEM 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A+ S V Y + + + + + + + I ++V A ++ L +++
Sbjct: 241 AEASAVQPFAYFHLMWTAILGITVFGETLRSAVIIGAALIVAA-GLFTLWRERAQSRSR 298
>gi|307709033|ref|ZP_07645493.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307620369|gb|EFN99485.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 298
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 101/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDR 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + +L+F+ L ++ ++ A+ + ++ PV + +
Sbjct: 62 MLAFLKDR-KSLLSLLIFALIGLFLNQFAYLTAIQETNAGTATVLQYICPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
K +I++ +L I ++ H + LS+ A + + I +
Sbjct: 121 DKVAPTLGEIVSIILAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQANIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + + +++ A+ + L ++
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLLLEK 298
>gi|77465314|ref|YP_354817.1| drug/metabolite exporter (DME) family protein [Rhodobacter
sphaeroides 2.4.1]
gi|77389732|gb|ABA80916.1| possible transporter, DME family, DMT superfamily [Rhodobacter
sphaeroides 2.4.1]
Length = 307
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 82/292 (28%), Gaps = 2/292 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L V A +LWG T L L V + R+ + + +
Sbjct: 8 LLCVILAAVLWGTTGTVQSLLPPEREPLIVAAIRLAVGATLLTLMALRLPESRRAFRRLP 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQG-FLTSFSYFVTPVISVFLGSVFLKERLN 144
P V L L + + S +VT + L + R
Sbjct: 68 WRPVLVAGLAIGLYNLLFFVAVTQAGVGVGTAIAIGSAPVWVTLYEAAVLRRLPTGVRAA 127
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +L + + +LA A + ++ T VG+
Sbjct: 128 GQVLSVLGAALLVAGAGAGSASLTGAALAAAAGAAYATYSVATSRVGAQVPSDTLAAATF 187
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ F + L + + +F+ G+ ST +
Sbjct: 188 GVAMLLAAPALFLLPVSWVADLRAWPALLFLGAVTTGVAYALFTRGLAGLATSTAVTLSL 247
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
PL + ++ +L + + R + ++ + + L + + ++
Sbjct: 248 VEPLTAWILAIVVLGEAVTAQRLLGAALLFAGLAIVTLAPARPAVRATRGEN 299
>gi|116492888|ref|YP_804623.1| DMT family permease [Pediococcus pentosaceus ATCC 25745]
gi|116103038|gb|ABJ68181.1| permease of the drug/metabolite transporter (DMT) superfamily
[Pediococcus pentosaceus ATCC 25745]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 86/298 (28%), Gaps = 10/298 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G LF +LWG + QF+ + + ++ R L + + +
Sbjct: 1 MNQNKTKGLLFAILGSVLWGGSGTAAQFVFHHQSIDPIWLVGVR-LLTAGSLLIVYSFLK 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + + +++F+ + + A+ + F+ P+ +
Sbjct: 60 NGRKIFTIFYTKSNILWLILFALLGMVPSQLTYFLAIKFGNAATATILQFMGPLFIILAL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIP 189
+V + + +I+ L+ ++ L++ PL +
Sbjct: 120 AVGSRTLPRRIDVISILVALIGTLLLVTKGNLGSLALAPLAVFWGLMAGVGQANYTLIPR 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ A+ + L + + +
Sbjct: 180 RLLKNFDAALVTGWAMLIGSIPFAKIIITNRPASIDPASILLIVYIIVGGTMLSYLFYLS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ K T G++ PL + S+ +L TI +++ + LPT
Sbjct: 240 SLNYLKPDTTGMLSSFEPLTATLLSILLLGVHFGLAETIGGLLILTTAFLQALPTRKK 297
>gi|312866462|ref|ZP_07726680.1| putative membrane protein [Streptococcus downei F0415]
gi|311098156|gb|EFQ56382.1| putative membrane protein [Streptococcus downei F0415]
Length = 302
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/300 (14%), Positives = 103/300 (34%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T GT+ A + WG + + Q+L + +SV + S R++ + +
Sbjct: 2 SKTFKGTMITIAATLCWGFSGISGQYLMAQGISVNLLTSLRLIIAGLVLTGLAFIKDKA- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L V +L+F+ L + ++ A+ + +++PV+ + S+
Sbjct: 61 TLTSLMSSGSNRVRLLIFAICGLLANQYAYLQAIHYTNAGTATVLQYISPVLVLAYVSLK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ + ++ L IL ++ H L + ++ + +
Sbjct: 121 GRTLPTFSESLSIFLAILGTFLIATHGHLASLAITPLGLFWGVLSAFTYTAYMIIPAKLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S G + + + + L ++ + + +F GI
Sbjct: 181 QSYGSLTIVGLGMLIGGLVFPIFTQAWRYRLPLNSLNLLALFGLIVVGAILSYTLFLKGI 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ ++ + IL Q + + +V+A+++ L +I S K
Sbjct: 241 SMVGPLKGSLLAAIEPVASVILAALILGQVFYQMDILGMLFIVLAVLIISLRDLIISRKK 300
>gi|320108572|ref|YP_004184162.1| hypothetical protein AciPR4_3414 [Terriglobus saanensis SP1PR4]
gi|319927093|gb|ADV84168.1| protein of unknown function DUF6 transmembrane [Terriglobus
saanensis SP1PR4]
Length = 317
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 90/286 (31%), Gaps = 17/286 (5%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y WG T + +++ +S R + + + + + + L +G
Sbjct: 23 YFFWGSTFVAIRYVVRFISPAFTSGLRYAIAGSLLMAILAARGKSVRVSRRELVRLLVIG 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+++ + + + WG + + S + + +V V E LN + +
Sbjct: 83 LMLLTGNNVLLAWGEQYVSSGMASLIMASIPILIALLETV----VPGGEPLNGVGWVGTT 138
Query: 153 LIILSLLIMTLHSGI------------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + ++++ S + + V+W+ + +
Sbjct: 139 LGVGGMVLLLWPSLHLPEGTNGGVLLACGILMLGGVSWAVGSVVARRWTSSADPMVASAW 198
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L A + + G L + + ++Y + ++ V
Sbjct: 199 QMLMGGATNIGIGSVLGGWHTAHWTRGVVLGLLWLAIFGSLIGYSAYTYLLHHVPVAKVA 258
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y P++ ++ L + + + + G++++A+
Sbjct: 259 TYAYVNPIVAVLLGAIFLGERLRGLEWVGMGVILLAVATVTASKAK 304
>gi|266619795|ref|ZP_06112730.1| permease, drug/metabolite transporter superfamily [Clostridium
hathewayi DSM 13479]
gi|288868646|gb|EFD00945.1| permease, drug/metabolite transporter superfamily [Clostridium
hathewayi DSM 13479]
Length = 294
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 93/278 (33%), Gaps = 17/278 (6%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
V A +++G L+ + + + + R + + + +
Sbjct: 7 VIAAMLMFGSIGLFVRGIA-LPSSVIALVRGVIGCFFLV----TAGSLMKQPVNWKAVKS 61
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+LV S + +W F A + SY+ PV + + V L E+L ++
Sbjct: 62 NWLVLVLSGAAIGFNWIFLFEAYRYTTVSCATLSYYFAPVFVILVSPVVLGEKLTKRKLC 121
Query: 150 AALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A ++ +++++ +G+ + + + G
Sbjct: 122 CAAGAVIGMILVSNVLFLDQGENGLIGIFFGLMAAVLYASVMILNKFMKGLTGLETTAAQ 181
Query: 203 LAIPALFYVVWNGFSGGEHFF-----LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + A+ + + + E F + + L + + ++ +K+
Sbjct: 182 LGVAAVILLPYTLLTSAEPFSAVLSSVPAVSWILLAFVGIVHTGVGYLLYFSAMKKLPAQ 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
TV ++ Y P+ I+ S IL + + + +++
Sbjct: 242 TVAVLSYIDPVTAIILSAVILGETMSGPQMAGAVLILG 279
>gi|253584034|ref|ZP_04861232.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834606|gb|EES63169.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 283
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 95/282 (33%), Gaps = 7/282 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
F+ + + + + + ++L + + E + R L SL F+ I
Sbjct: 2 SNKTKAVFFMLISALGFTLMSVTVKYLGDIPLFEKVFFRNLVSLVIAFYFI------KKS 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K L+ A YA+ ++ ++P+ + +FLK
Sbjct: 56 SSPVFGQRKNQLALLARAGFGLTGVILNFYAISRLTLADSTMLGKLSPIFVTIMACLFLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ QII+ + L++ + +I+ SA + +
Sbjct: 116 EKIDKEQIISIFITFAGALLVIKPQFSLSIIPSISGLLSAAFSGVAYTLLRYLKDKESPD 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ ++ V+ + + + + GL S +Y K + + V
Sbjct: 176 TIVFYFSIISVLGTLPFVLADYVIPTSTQIMLFLATGLFASIGQFGITYAYKYSNATEVS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I Y+A + I+ + D + + I++ A+ Y
Sbjct: 236 IYTYSAIVFGILFGFIFFHEIPDMLSLLGGAIII-AVAYYTF 276
>gi|242280175|ref|YP_002992304.1| hypothetical protein Desal_2711 [Desulfovibrio salexigens DSM 2638]
gi|242123069|gb|ACS80765.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
salexigens DSM 2638]
Length = 300
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 93/296 (31%), Gaps = 5/296 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G +FV CA I+WG+ ++F + V+ LE R +++ +F + +
Sbjct: 2 NIKGCIFVICAAIMWGLIGPISKFPIEQGVAPLENAFWRAVFAW-MLFAVHACRIRAIKI 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L G + + + L + +V + + LG
Sbjct: 61 DIKDLPQIIGFGFVGVTIFYGSYQLAVQDVGAALASVLLYTAPAWVAFMSWLLLGERMTP 120
Query: 141 ERL--NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ + I + L I + + I ++ G +
Sbjct: 121 IKISAMLITIFGVTCVSLGPHIFGTGTEMSFTWPGIIFGLTSGFTYALYYIYGKTIFARY 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + AL E + + + I+ G+K + +
Sbjct: 181 TTPTIFLYALPIGALCLLPFFEFTPKTGTSWMSIIALALICTYGAYSIYYAGLKWLEPTA 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ P++ V + + D I +++ A+++ ++ I ++ +
Sbjct: 241 ASVIATIEPVIAAVLAWLWWNESFDWTGYIGSALIISAVLMIVMENKIIELFSRKR 296
>gi|297192981|ref|ZP_06910379.1| DMT superfamily permease [Streptomyces pristinaespiralis ATCC
25486]
gi|197723386|gb|EDY67294.1| DMT superfamily permease [Streptomyces pristinaespiralis ATCC
25486]
Length = 317
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 86/278 (30%), Gaps = 11/278 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A+ G + + A L G ++ S V+ R L+ + ++
Sbjct: 2 TAAARQRRGAVQLIAAMGLSGTLGVFV-LESGASSFNVVFFRCLFGALALAAYCLF---- 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
LK+T + + + +W A + + Y P V LG++
Sbjct: 57 RGYLKNTRLTRGTLALAALGGVFIVFNWVLLFDAYSRTSISVATVVYHTQPFYVVLLGAL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
KERL+ + ++++ L L +A +A T+
Sbjct: 117 LFKERLDRYRAGWIAAAFAGVVLVADLPGADLGGSEGYLLGVGEALVAALFYAFATVIAK 176
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
E+ L + + F+ + + + ++ +
Sbjct: 177 RLTTLRPEVTALVQVLVGIPLLLPFTRLGDTAGLDARWGWLVGLGVIHTCVMYILLYSSY 236
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
++ + ++ + P + I+ + + ID ++ +
Sbjct: 237 QKLATDRIAVLSFVYPAVAILVDLTVYGHRIDALQALG 274
>gi|109899785|ref|YP_663040.1| hypothetical protein Patl_3484 [Pseudoalteromonas atlantica T6c]
gi|109702066|gb|ABG41986.1| protein of unknown function DUF6, transmembrane [Pseudoalteromonas
atlantica T6c]
Length = 288
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 101/282 (35%), Gaps = 9/282 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
IL G T L+++ + +S ++ R + + +F + G LSL + K
Sbjct: 13 LTVILLGATALFSKVI-PLSATDITFGRSIIACVVLFSLVKMTGGKLSLAR-----KKDY 66
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ + ++A HW + A+ + + F PVI+V + F RL I++A
Sbjct: 67 FIGIGLGILMAAHWVSYFAAMQYSSVSVGMIALFTFPVITVLIEPFFEGIRLVWQDILSA 126
Query: 152 LLIILSLLIMTLHSGIPLLS---LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L++ + + ++ + + + + + R + + + +
Sbjct: 127 LVVFIGIFLIVPEVSLENDVTLGILVGILSAVLYAFRNLCHRKYFSHYSGSLAMAYQTLV 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + F E + + + + ++ + T ++ PL
Sbjct: 187 IFFCLSFFITPELLNASGQTYIYLALLGTFFTAVPHALIATSLQHLRAKTFSLVACMQPL 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ ++ +L + + + +V+ A + + T K
Sbjct: 247 YGVILAILVLDEQPNWQTYVGGLLVISAALYETVNTQKLHKK 288
>gi|145631905|ref|ZP_01787661.1| triosephosphate isomerase [Haemophilus influenzae R3021]
gi|145637615|ref|ZP_01793271.1| hypothetical protein CGSHiHH_07079 [Haemophilus influenzae PittHH]
gi|145639437|ref|ZP_01795042.1| triosephosphate isomerase [Haemophilus influenzae PittII]
gi|145641986|ref|ZP_01797559.1| hypothetical protein CGSHiR3021_02833 [Haemophilus influenzae
R3021]
gi|148826668|ref|YP_001291421.1| hypothetical protein CGSHiEE_08695 [Haemophilus influenzae PittEE]
gi|229847204|ref|ZP_04467308.1| hypothetical protein CGSHi7P49H1_08870 [Haemophilus influenzae
7P49H1]
gi|260581490|ref|ZP_05849300.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|319775469|ref|YP_004137957.1| hypothetical protein HICON_08080 [Haemophilus influenzae F3047]
gi|319897875|ref|YP_004136072.1| hypothetical protein HIBPF17040 [Haemophilus influenzae F3031]
gi|329122496|ref|ZP_08251081.1| DMT superfamily drug/metabolite transporter [Haemophilus aegyptius
ATCC 11116]
gi|144982466|gb|EDJ90032.1| triosephosphate isomerase [Haemophilus influenzae R3021]
gi|145269212|gb|EDK09159.1| hypothetical protein CGSHiHH_07079 [Haemophilus influenzae PittHH]
gi|145271484|gb|EDK11396.1| triosephosphate isomerase [Haemophilus influenzae PittII]
gi|145273352|gb|EDK13225.1| hypothetical protein CGSHiR3021_02833 [Haemophilus influenzae
22.4-21]
gi|148716828|gb|ABQ99038.1| hypothetical protein CGSHiEE_08695 [Haemophilus influenzae PittEE]
gi|229809880|gb|EEP45602.1| hypothetical protein CGSHi7P49H1_08870 [Haemophilus influenzae
7P49H1]
gi|260091850|gb|EEW75803.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|301169397|emb|CBW28997.1| conserved hypothetical protein [Haemophilus influenzae 10810]
gi|309751720|gb|ADO81704.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
gi|309973811|gb|ADO97012.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
gi|317433381|emb|CBY81761.1| conserved hypothetical protein [Haemophilus influenzae F3031]
gi|317450060|emb|CBY86274.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327473186|gb|EGF18608.1| DMT superfamily drug/metabolite transporter [Haemophilus aegyptius
ATCC 11116]
Length = 292
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/289 (20%), Positives = 123/289 (42%), Gaps = 8/289 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A L+G ++ L+ +S ++ +R++++ P V ++ F + L
Sbjct: 3 KGILVSLLASFLFGYMYYFSTLLKPLSGTDIFGYRMIFTFPFVLLSVTLFKQKAALIERL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K K P + ++ F++A SF Y + P++ V G VF KE
Sbjct: 63 KRIQKRPHLALSYLLCGLLMGFQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRVFFKE 122
Query: 142 RLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R++ + IA ++ L ++ + L G+ ++ I + ++AY RK + F +EM
Sbjct: 123 RISTFKFIAVIIATLGVISNIVLKGGLSWEAIVICLGYTAYFSIRKALKNTDLASFCLEM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++++ + N L+ GL++ + ++ +G
Sbjct: 183 LSLMPVSIYFA---LQTDFATVQQTNPFIWGLLVLLGLISGTALIAYVIASNMLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ Y ++M+ S I + ID+ +F +VIAM++ ++ V
Sbjct: 240 LLGYVETIMMLCVSFLI-GEQIDSESYPLFICLVIAMILVMVDGVYKQH 287
>gi|304395195|ref|ZP_07377079.1| protein of unknown function DUF6 transmembrane [Pantoea sp. aB]
gi|304357448|gb|EFM21811.1| protein of unknown function DUF6 transmembrane [Pantoea sp. aB]
Length = 303
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/303 (14%), Positives = 100/303 (33%), Gaps = 15/303 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G A + + + L+ + V EVI R + +L + + + L
Sbjct: 1 MNASAGIAMKITAALSSTLMLACVKGLDGAIPVGEVIFFRSVLALVPLLIWLSFQGSILD 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ V F +LL + + P+ +V L ++FL
Sbjct: 61 GIRTRNIRGHFVR-----GLAGTGGLYFSYLSLLYISLTDATAINYAAPLFTVLLAALFL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPV 190
+E++ H + +A +L+M + + +A C A + +
Sbjct: 116 REKVRHHRWVAVFTGFSGILVMFSGHLTLTSQATFSLSSSVGILLALMAALCTACALVQI 175
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + A+ + + + + + L+G GLL + +
Sbjct: 176 RFLNGKEKPGAIAFWFAVTTALTSLVTLPGGWKVPQGNQLALLVGCGLLGGITQILMTLS 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ A+ S + +YT + + +L + I +VVI + +L K
Sbjct: 236 LRYAEASLLAPFDYTTLIWSVAVGYLLLGNLPTSTTVIGAILVVIGGLYSVLYERYRFRK 295
Query: 311 NKT 313
+
Sbjct: 296 ARV 298
>gi|260576396|ref|ZP_05844387.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
gi|259021467|gb|EEW24772.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/299 (9%), Positives = 83/299 (27%), Gaps = 10/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G L + A + + ++ ++ + E++ +
Sbjct: 1 MENLRGILLMTAAMAGFALEDMFVKWAAADLPTGEILVMLSVVGTLVFAGIAKAQGQRFF 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T+ I + + + TP+ F ++FL
Sbjct: 61 DRAALHPALLWRNGGEMVGTLGF------ITGIALTPLTTVTAIFQATPLAVTFGAAIFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
E + + A L+ +L++ G L SL + +
Sbjct: 115 GETVGWRRWSAILVGFCGVLLVIRPGLAGFDLASLWSVLAVIGLSVRDLATRRVPARIST 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ A+ + + + ++ T + G + + ++ ++S
Sbjct: 175 MQISAWGFAAVGVLGGGMLAVSGGAVVPSLGQTGLMAGALSFGIAAYWAITQAMRLGEVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y + ++ + + D +++ +Y + K+
Sbjct: 235 VITPFRYARLIFALIIGTTVFNERPDAATLTGAALII-GSGLYTFARERAVKRRALSKN 292
>gi|258625534|ref|ZP_05720423.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258582178|gb|EEW07038.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 299
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 84/291 (28%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + ++ +
Sbjct: 3 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWFVAMLILTPFCL----PSAIRQWPT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKRYLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L +I +L + L M + + Y +
Sbjct: 119 LSVIGGVLSLSGLAYMLGEGNSLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + +H +L + ++ I
Sbjct: 179 WTLIYLQGVCAVFMLTPLWLTSDHLLPTEGSISLIAYAGIAASLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGETVHPYHLIGGLLVISGVALSQLKLPRRN 289
>gi|237740109|ref|ZP_04570590.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229422126|gb|EEO37173.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
Length = 301
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 92/301 (30%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G L +F A +WG + ++++ R + ++ + +++
Sbjct: 1 MNKKSYFGDLMLFLAAFIWGTAFVAQVAGMDRIGPFTFNMARSIVAVISLGAYLIFTKAK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L V + V L T F +I FL +
Sbjct: 61 LPKDMSFLLKGGLVC-----GFFIFVGTSLQQIGLQYTTAGKTGFITSFYILILPFLTMI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVG 191
FLK +++ L I+ ++ + L ++ + S + A
Sbjct: 116 FLKHKIDVLTWISVIIGFIGLYLLAIPSLSDFSMNKGDFIVFLGSFCWAGHILVIDYYSK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP--DTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + E L NI + + + +
Sbjct: 176 KVNPVELSFLQFVVLSILSGICALIFENETATLSNIFSSWKPIMYAGFFSSGVAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K K ++ + ++ +L + + + + IV +AM+ +P +
Sbjct: 236 GQKYTKPVVASLILSLEAVFAALAGYLLLDEVMTSREFLGSFIVFLAMIFSQIPKDLFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|90418077|ref|ZP_01225989.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337749|gb|EAS51400.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 297
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 89/283 (31%), Gaps = 9/283 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF+ + + + + + +S ++++ R + + +F L
Sbjct: 10 LFMLVSMAGFVVNDTFVKLAADHISPPQIMAVRGVVASLLLFLLAWRMGALRPLAMAMKP 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +AT +I AL S + P+ ++FL E +
Sbjct: 70 RLLVRTIADITAT------LSYITALSHMPIANASAIFQALPLTVTLGAALFLGEPVGWR 123
Query: 147 QIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A + + +L++ G + SLA+ + +A T + + + ++
Sbjct: 124 RWAAIAVGFVGVLVIVRPGTDGFTIYSLAVLASVAASAVRDLTTRRMDPKVPSLFIAMIT 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ + W + + L + + ++ + V Y
Sbjct: 184 AIAVSLLGWLLIPLAGGWRPMPALTLVHLSCAAASIAVGYIFIVQAMRIGDMGFVAPFRY 243
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ + + + + IVV + + L +
Sbjct: 244 AVLVFALILGLVVFGDLPSPLTLLGAAIVVASGLYTLYRERVR 286
>gi|78779243|ref|YP_397355.1| integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9312]
gi|78712742|gb|ABB49919.1| integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9312]
Length = 296
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 101/286 (35%), Gaps = 15/286 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + L + +++ + + E++ R SL F I LK+
Sbjct: 19 LVFASFFFSLMTLCVKNIDERIPIYELVFFRSFISLMITLFII--------NLKNINPWG 70
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K +L+ + + YA+ +++ + P+ +F+ E++ I
Sbjct: 71 KNRPLLILRGVLGTLALVCVFYAIRNMPLSISTVIQYTYPIFISIFAGIFINEKITRNII 130
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
IA ++ + +L++ S + +++ I A C A + V +
Sbjct: 131 IALIIGWIGILVIINPSQLSYINVEIENVSISIAFLGAICTALAYVTVKKLSFTEDVYVI 190
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L + ++ N + ++++G GL + G+K S +
Sbjct: 191 IEYFPLVSFITLLPIVLMNWVTPNWNELVWIMGIGLFTQLGQTFLTVGLKNLPASEASTI 250
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y L + V + I+ + +V++ ++ + +
Sbjct: 251 NYLQVLFGSIWGVLFFSEIININFLLGASLVLLGTIISTTKIIKKT 296
>gi|325291646|ref|YP_004277510.1| hypothetical protein AGROH133_03232 [Agrobacterium sp. H13-3]
gi|325059499|gb|ADY63190.1| hypothetical protein AGROH133_03232 [Agrobacterium sp. H13-3]
Length = 306
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 98/298 (32%), Gaps = 11/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
PT +G + +L+ + ++L S +VI R + +L + +
Sbjct: 9 SPTGLGVAVMLLGMLLFALNDAMGKWLVSTYSQGQVILIRSVAALVILVPIV------WK 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + V F +A+ + P+ L L
Sbjct: 63 GGLSGLMKIERPSLQVARVFFSTAELFCFYFAVAALPLADVMTYWLAAPIYVAALSPFLL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV---TWSAYCFARKTIPVGSSEGF 196
E++ + A + + +LI S L S A+ + + + ++
Sbjct: 123 GEKVGWRRWTAIAIGFVGVLIALQPSSASLTSAALFSILGSAAFAFMMLSGRQLRNTPDT 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + L +V + + + D FL G++ + + +K A
Sbjct: 183 VLAFWQIIGAGLAGLVAVFVTPSGWLPVQSGFDLAFLGLLGVVAMAAHVLVNRALKLADA 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKT 313
+TV ++YT L +V T + G++V+ + ++ + G+ K
Sbjct: 243 ATVAPLQYTLLLWAVVFGWLFFGDVPQTSIVVGAGLIVLSGLYIFFRENTLKRGREKV 300
>gi|260466682|ref|ZP_05812869.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259029545|gb|EEW30834.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 315
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 99/310 (31%), Gaps = 26/310 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L + +++ + + + V EV++ R + +LP + + G
Sbjct: 1 MQNRMVRGILSLCLGVLVFSLQDPLVKAVSSGYPVTEVMAIRSIVALPILILLVHADVGL 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++L G+L A I + + A+ YF+ P+ + L
Sbjct: 61 PAILSR------RFGLLTIRAFIQFTSYTMYYLAIAALPLADAVALYFMAPLFIMALAGP 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L ER++ + L+ +L +++M A+ SA + +
Sbjct: 115 YLGERVSWRTLATVLIGLLGVVVMVRPGAGLFDWAALLSLGSAALYGFSQLMARKIGDTE 174
Query: 198 IEMCVLAI-------------------PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ V + + +PD L + G
Sbjct: 175 SSTVMAFYQNGAYLIGAAMVAGSFHLAGITHAVHPSLEFLVRPWIWPTLPDFLKMAACGF 234
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ S + S G + A + V EYT L + + + I +++ A +
Sbjct: 235 VASAGMILLSQGYRLAPANRVATFEYTGILWSPLWGFLFFAEVPRSTTVIGAALIIGAGL 294
Query: 299 VYLLPTVINS 308
+ L + S
Sbjct: 295 LALNSGLRKS 304
>gi|218898252|ref|YP_002446663.1| integral membrane protein DUF6 [Bacillus cereus G9842]
gi|218542832|gb|ACK95226.1| integral membrane protein DUF6 [Bacillus cereus G9842]
Length = 302
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 81/279 (29%), Gaps = 6/279 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ ++WG + + + L + L V R + + I +F +
Sbjct: 6 YFALIMLSLIWGGSFYFFKILVTDFNPLVVAFLRSTFGAITLIALIPFFRKSFRGNIFFI 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF--LGSVFLKERL 143
+ L + + L T + + I +F + L
Sbjct: 66 PLFAVGILNTLIPWTLICFSEQKMTSNLASVLNATQPLWTMVLGILLFGIHSNRNQIIGL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +L + L + + +++ IA + F I + L
Sbjct: 126 FIGFVGILILSDIHLSNVFSVDSLNFVAMLIATFCYGLATHITKRYLKEMSMFQISLGTL 185
Query: 204 AIPALF---YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ ++ V++ + + + + ++ Y I++ +
Sbjct: 186 LVGSICSGGIVLFLEEPIQILTKISWHHIGALIGIGTFGSGIAYLLYFYLIQKGGPNFAS 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I Y P+ I +L + I I ++I + +
Sbjct: 246 ISTYLVPVSAIFWGYILLNENISWRLIIGLVFILIGVYI 284
>gi|153855161|ref|ZP_01996345.1| hypothetical protein DORLON_02358 [Dorea longicatena DSM 13814]
gi|149752330|gb|EDM62261.1| hypothetical protein DORLON_02358 [Dorea longicatena DSM 13814]
Length = 285
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 89/289 (30%), Gaps = 9/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G F+ + + + + + + ++ R L + I+ G +
Sbjct: 2 NSRYKGIFFITLSALSFAFMNAFVRLSGDLPSVQKSFFRNLVAFFIALIMIIRSKDGFKI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K LK AT V YA+ S ++P + + LK
Sbjct: 62 EKGNLKYMILR------ATFGTVGILCNFYAVDHLVLSDASMLNKMSPFFVIIFSFLLLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE- 199
E+++ Q +A + L + + + + + A + G +
Sbjct: 116 EKMSPAQALAVAGAFIGSLFVIKPTFTNMALVPSLIGLCGGICAGIAYAMVRILGQRGQK 175
Query: 200 -MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+ + F V F + L L+G GL + + A
Sbjct: 176 GSSVVIFFSGFSCVVTLPYLLLDFHPMSGLQILTLLGAGLAAAGGQFGITAAYYHAPAKE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVI 306
+ I +Y+ + + F+ Q D + + I+ A+ +++
Sbjct: 236 ISIYDYSQIIFSTILGFFLFGQVPDRYSVLGYVIICAMALWMFVYNKNR 284
>gi|84387764|ref|ZP_00990779.1| transporter, drug/metabolite exporter family [Vibrio splendidus
12B01]
gi|84377279|gb|EAP94147.1| transporter, drug/metabolite exporter family [Vibrio splendidus
12B01]
Length = 282
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 98/285 (34%), Gaps = 10/285 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + + ++ + + L V L+ I R L SL + K
Sbjct: 7 GILLLVAGNLFASLSDVAVKLLNGEVPPLQYIFFRQLISLLIITPL-------WLQQKKE 59
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + ++ + G + A+ + ++V P++ + L LKE+
Sbjct: 60 QRRLQQAKVTFIRGQLILIGSGCMVVAITHLSLATANAVFYVAPLLMLPLSMFLLKEQPA 119
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++IA + + LI+ S A+ +A A + V + L
Sbjct: 120 LGKVIATTIGFIGALIVLRPS--QFHWAALFALGTALTLALFNVLVRKLPSEQTVVTTLW 177
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
LF + + ++ ++ ++ L + ++A S + + EY
Sbjct: 178 WTTLFSIPASLVLCFLYWQPVSVEHLGYIALSATLILSYNGLAVAAYQKAHSSQIALAEY 237
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + + + DT+ I ++++ + + P +
Sbjct: 238 SGLVFVAIIGAIWFDEIPDTLTFIGIMLIILPLAPFKRPKKRANH 282
>gi|229828397|ref|ZP_04454466.1| hypothetical protein GCWU000342_00458 [Shuttleworthia satelles DSM
14600]
gi|229792991|gb|EEP29105.1| hypothetical protein GCWU000342_00458 [Shuttleworthia satelles DSM
14600]
Length = 320
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 92/293 (31%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G + I WG++ Q+L +++ ++ R+ + + + G
Sbjct: 24 NQKLLGAFSAVASGICWGLSGSMGQYLFTYQKMQTPWLVPIRLFLAGLIMLTYCLVKYGP 83
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ A+ LV+ +A+ + + + + ++P +++ L +
Sbjct: 84 RKSWQPFTNRRDALLTLVYGIPGVALCQFLYFLCIQLSSASMGTILQDLSPGLTLLLVCL 143
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
+ R + L+++A L +L + H L+ I + +
Sbjct: 144 LSRRRPHRLELLAICFAFLGVLSIVSHGRPGELRVSPLALAAGIGSAIGIAVYNLVGKSI 203
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I + + +I + N F ++ G
Sbjct: 204 LKKYPVAIMQAWAFFWGGIVMALIFQPWHIPYRPNSIGYLGIAFVVLVGNVAAFSLYMTG 263
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ R + ++ P+ V + + P + F +++I M+
Sbjct: 264 LNRIGPVPAALYAFSEPVTAAVVTGIFFQTPFSLWDGLGFLLILIMMICISYR 316
>gi|126650562|ref|ZP_01722785.1| hypothetical protein BB14905_08228 [Bacillus sp. B14905]
gi|126592718|gb|EAZ86717.1| hypothetical protein BB14905_08228 [Bacillus sp. B14905]
Length = 314
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 97/308 (31%), Gaps = 22/308 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++ G++ L+ + L S ++ ++HR + G+ +V+ L+
Sbjct: 9 SKKRKAYIAAISYALIIGLSFLFVKVTLTVASPVDTLAHRFTVAFIGIVILLVFTKNKLT 68
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + +L + + F + L P+ ++ L + L
Sbjct: 69 I-----KKQDLLKILPLAILYPIAFFTFQVLGLARISSSEAGIIQATIPIFTLALAGLLL 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AYCFARKTIPVGS 192
KE+ Q +A +L ++ M + +G S + + A + +
Sbjct: 124 KEKATRGQFVAISFSVLGVMYMLMMNGANATSGNVIGSGFILLSAIAASIYNVFARRLTK 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNG---------FSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
V+ + FL L L +
Sbjct: 184 QYSLLTLTYVMTLCGFVIFNGIAVGDHMLKGTIHDFFQPFLHVDFIIAILYLGLLSSLGT 243
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +Y + + S + + A L+ I + V L + T I ++V+ ++
Sbjct: 244 SYLSNYALFILEASKMSVFSNLATLITIFAGVLFLHETFQTYHLIGGVMIVMGVIGTNYF 303
Query: 304 TVINSGKN 311
+ KN
Sbjct: 304 GMKRVEKN 311
>gi|264680279|ref|YP_003280189.1| hypothetical membrane protein [Comamonas testosteroni CNB-2]
gi|262210795|gb|ACY34893.1| hypothetical membrane protein [Comamonas testosteroni CNB-2]
Length = 326
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 86/294 (29%), Gaps = 14/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ++W + + ++ +S E+ R L + ++ +
Sbjct: 26 YLLPLGAVLIWSVNTVVSKLAADSISAAEIGFFRWLVAAVLFTPFVL----PSIWRQRAD 81
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V + ++ YA +TP++ + L L + L H
Sbjct: 82 IKPLLPRIFVLGVLGMVIYQSLAYYAAHFTTATHMGIIGSLTPMLVLALAVFMLGQPLTH 141
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--------- 196
I +LL IL + ++ + L+ A F +
Sbjct: 142 GGIWGSLLAILGVALVVSSGRLSHLASEGLNLGDAMMFLAMLAYAVYNILLKRWPMPRLA 201
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+++ L + V + L L + + ++ ++
Sbjct: 202 TVQLLYLQVLVAVVVQLPLYLFSPKTGLDASNLPLVGYAGIMASIAAPLLWMKAVQTLGP 261
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ + + F L +P+ + + + +++ L +
Sbjct: 262 GRSSMFFNLIPVFTALIAAFALNEPLAAYHAVGGIMTIAGLLLAELWKAPLRAR 315
>gi|262173405|ref|ZP_06041082.1| putative membrane protein [Vibrio mimicus MB-451]
gi|261890763|gb|EEY36750.1| putative membrane protein [Vibrio mimicus MB-451]
Length = 299
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 84/291 (28%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + ++ +
Sbjct: 3 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWFLAMLILTPFCL----PSAIRQWPT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKRYLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 119 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + +H +L + ++ I
Sbjct: 179 WTLIYLQGVCAVFMLTPLWLTSDHLLPTEGSISLIAYAGIAASLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGETVHPYHLIGGLLVISGVALSQLKLPRRN 289
>gi|228925770|ref|ZP_04088854.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229120232|ref|ZP_04249483.1| Transporter, drug/metabolite exporter [Bacillus cereus 95/8201]
gi|228663273|gb|EEL18862.1| Transporter, drug/metabolite exporter [Bacillus cereus 95/8201]
gi|228833785|gb|EEM79338.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 310
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSVDFLTIRLLLAGLFILSFLLVKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFEQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + + LI + + F +
Sbjct: 181 SLIKECGTIVVIGWGMLMGGIALLICNRSFEWTQLSQTFTLKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGLCIVLSVIFLTMPQ 298
>gi|226943118|ref|YP_002798191.1| hypothetical protein Avin_09840 [Azotobacter vinelandii DJ]
gi|226718045|gb|ACO77216.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 295
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 97/281 (34%), Gaps = 5/281 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + A ++ ++L L ++ S V + GLS+++
Sbjct: 1 MLILAAGLVLASHDGIAKYLALSHSLILVVWARYLSQSLVMLLLFGPRRGLSIVRTGH-- 58
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + L F+ +L + F+ P+ L + L+ER++ Q
Sbjct: 59 ---PVLQLIRGLCLVAVSLLFVSSLRHIPIGEATAVLFLAPLFITGLSATLLRERVSRGQ 115
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
A +L +L +L++ G A+ +A+C A + + + +
Sbjct: 116 WGAVVLGLLGVLVIVRPGGALFTPAALLPLGAAFCLATFMLLTRRLSESDDPVTCNFLSS 175
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + ++ + D L L G G + + S+ + A +T+ Y+
Sbjct: 176 LVGTLLMSVLVPFYWETPDSHDGLLLAGMGGVAMSGHLLLSHAYRYASAATLAPFTYSQI 235
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ ++ D V + IV+ + V+ + +
Sbjct: 236 VFAVLVGAVAFDHVPDGVALLGIAIVIASGVLSVWVQRRAA 276
>gi|209964181|ref|YP_002297096.1| hypothetical protein RC1_0853 [Rhodospirillum centenum SW]
gi|209957647|gb|ACI98283.1| membrane protein, putative [Rhodospirillum centenum SW]
Length = 321
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 94/290 (32%), Gaps = 19/290 (6%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A L+ + L L +++ R ++L ++ I G SL
Sbjct: 22 MALAIFLFASMNAMVKALGDTYPLSQIVFFRAFFALISIWPMIRAAGGLRSL------RT 75
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + A++ + F P+ + L + L ER+ +
Sbjct: 76 ERPWGHAWRCAAGVTAMACGFAAIMMLPLANAAALGFTAPLFTTVLAVLILGERVRWRRT 135
Query: 149 IAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+A +L +L+M + ++ ++ A A I +
Sbjct: 136 LALILGFCGVLVMLSPKLGLSGDVPAGATTEGMVLGSVLALAGAASAALAMISIRRLSAT 195
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ + V +G F + ++ L L+ GL + + + A +
Sbjct: 196 EPSTTIVFWFMITACVASGILLPFQFVMPDLKGLLLLVTIGLFGGVAQLLLTRAYRSAPV 255
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ V +YTA + + I + +T I IV+ + V L +
Sbjct: 256 AVVAPFDYTAMVWATLYGYLIWDEVPETAVWIGAAIVIGSGVYITLREIR 305
>gi|21228035|ref|NP_633957.1| integral membrane protein [Methanosarcina mazei Go1]
gi|20906467|gb|AAM31629.1| integral membrane protein [Methanosarcina mazei Go1]
Length = 304
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 91/292 (31%), Gaps = 14/292 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V + + + L+ + + + VI +R+ + + +F I+ L
Sbjct: 4 ESKKAHLAVIIGCVFYSMNGLFISHIHDMDISPVIFYRLFFGILFLFIYIISRGKTPDL- 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K G L ++ + + L T + + PV + + LKE
Sbjct: 63 ----RLKKRRGSLFLQGVLVVMCMLLYFTCLKTTCVSIAILLQYTAPVYVMLVSPFLLKE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVGS 192
++ I A + I + +M +G ++ + + A
Sbjct: 119 KIRKESIAALFIAITGVFLMVRPEDGLSGIELTGSYMIGIIAGLLSGIVFAALILNVKVL 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ V + ++ + + + T+ + + F G
Sbjct: 179 KTEYPELAIVFWPMGIALLLLSPSAFDVSRDVLYSNLTVLAVFGIVSIGFGEIFTILGFA 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
K T ++ P+ + + +L + +++++ ++ L
Sbjct: 239 NLKAQTGSLLALIEPVSGVFLDIAVLGIALSPETLAGCALIMVSALIISLKG 290
>gi|86147621|ref|ZP_01065931.1| hypothetical protein MED222_23068 [Vibrio sp. MED222]
gi|85834660|gb|EAQ52808.1| hypothetical protein MED222_23068 [Vibrio sp. MED222]
Length = 282
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 100/284 (35%), Gaps = 10/284 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + + ++ + + L V L+ I R L SL + + K
Sbjct: 7 GILLLVAGNLFASLSDVAVKLLNGEVPPLQYIFFRQLISLLIITPLWL-------QQKKE 59
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + ++ + G + A+ + ++V P++ + L LKE+
Sbjct: 60 QRRLQQAKVTIIRGQLILIGSGCMVVAITHLSLATANAVFYVAPLLMLPLSMFLLKEQPA 119
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++IA + + LI+ S A+ +A A + V + L
Sbjct: 120 LGKVIATTIGFIGALIVLRPS--QFHWAALFALGTALTLALFNVLVRKLPSEQTVITTLW 177
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
LF + + ++ ++ ++ L + ++A S + + EY
Sbjct: 178 WTTLFSIPASLVLCFLYWQPVSVEHLGYIALSATLILSYNGLAVAAYQKAHSSQIALAEY 237
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + + DT+ I ++++ + + P +
Sbjct: 238 SGLVFVALIGAIWFDEIPDTLTFIGIMLIILPLAPFKRPKKRAN 281
>gi|331700598|ref|YP_004397557.1| hypothetical protein Lbuc_0214 [Lactobacillus buchneri NRRL
B-30929]
gi|329127941|gb|AEB72494.1| protein of unknown function DUF6 transmembrane [Lactobacillus
buchneri NRRL B-30929]
Length = 304
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 91/297 (30%), Gaps = 11/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ G + +LWGI+ QFL VS ++S R+L S + +
Sbjct: 1 MKNGSIRGIVLAMLGPLLWGISGTLAQFLFDDIHVSSHWLVSVRMLISGILLVLYGLI-G 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++ ++ ++ FS +A + A+ + F+ P + +
Sbjct: 60 NHRQEMRVWHHKRDSLSLIFFSFIGMAASQYTYFMAIEAGNAATATILQFLAPAMIIIYL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTI 188
+++ + + + + ++ + +++ H + L++ + +
Sbjct: 120 ALWTRRFPRRIDVFSVIMALSGTVLLVTHGQLTTLAMPLGGFVWGVGAAVSSTLYTLLPR 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + + + F + +
Sbjct: 180 NLLKEYGSIPIVGWSMLIGGTAFSLYYRIWDDMPAFSWTTYGSVSFVVIFGTMFAYLFYL 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ + +T ++ PL S+ L TI +++ + V T
Sbjct: 240 QSLRYIQPTTASVLGSFEPLSATTLSIIFLGVSFGVPETIGAVLILGTVAVQAWATY 296
>gi|229198552|ref|ZP_04325255.1| Permease of the drug/metabolite transporter [Bacillus cereus m1293]
gi|228584937|gb|EEK43052.1| Permease of the drug/metabolite transporter [Bacillus cereus m1293]
Length = 315
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 91/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 14 YVIMLLVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTSL 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 70 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 129
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 130 KVGISLMLSLIGVIVVITSGSINTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMSGVSP 189
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 190 LLTTMSMTVLGTGFLAGLSLYEDGWGKVGTFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 249
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + + IV+I + + + + + K
Sbjct: 250 LGASKASMYLNLTPIVATCISVVLYGAAVTWQQIVGMAIVLIGVYIATVQSNKDIKK 306
>gi|227893940|ref|ZP_04011745.1| DMT superfamily drug/metabolite transporter [Lactobacillus
ultunensis DSM 16047]
gi|227864244|gb|EEJ71665.1| DMT superfamily drug/metabolite transporter [Lactobacillus
ultunensis DSM 16047]
Length = 311
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 93/293 (31%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G WG + +FL V ++ R+++S + Y
Sbjct: 13 NQRYRGITLAVVGACFWGASGTAVEFLFANSNVDTSWLVGLRLIFSGLLLIIYACYKYLD 72
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + +++F+ + + A+ + F+ PV + S+
Sbjct: 73 QVKAMFHDK-KALIMLILFAFLGMGSSQLSYFVAVKYSNAPTATVIQFLAPVFIILYSSI 131
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVG 191
K + I+ L+ + I+ P+ L + +
Sbjct: 132 RSKMLPRRIDAISILVAVGVTFILATGGRFDQLALSPMACLWGLIAALSEAINTVMPGNL 191
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I + A+ + L +I + + + ++ +
Sbjct: 192 FKKYGTIPVVGAAMFISGLAFIPIYFNEPMPKLTSIDMWMIVYIIIGGTLLAYTMYLSSV 251
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + +TVG++ PL+ + SV +L + + ++V+A + L+P+
Sbjct: 252 QYIEPATVGMLGAFEPLIATILSVTLLHADFGPIDMLGGLLIVVATFMQLVPS 304
>gi|170754492|ref|YP_001780355.1| EamA family protein [Clostridium botulinum B1 str. Okra]
gi|169119704|gb|ACA43540.1| integral membrane protein [Clostridium botulinum B1 str. Okra]
Length = 293
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 99/285 (34%), Gaps = 12/285 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ G L+ + + S ++ R + V + +S
Sbjct: 9 LLSMLIVGSIGLFVRSI-PFSSAQIALVRGILGCAFVLVFSLMSGQKISGKNI----KAN 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S L+V+W A + Y+ PV+ + L + LKE L+ L+++
Sbjct: 64 LWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLC 123
Query: 151 ALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ L + + + + + +G + L
Sbjct: 124 IVAALVGLACIAGVSKKAGANDFVGILYGLGSAVLYATVIFLNKCLKDIKGIESSIVQLG 183
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ + + S G + P L LI + V+ ++ ++ +V +
Sbjct: 184 VSAISLLAYVLMSEGFKLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVASLS 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P++ I+ + L + + V+ I +++ A +
Sbjct: 244 YIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKK 288
>gi|229074532|ref|ZP_04207561.1| Transporter, EamA [Bacillus cereus Rock4-18]
gi|229095466|ref|ZP_04226457.1| Transporter, EamA [Bacillus cereus Rock3-29]
gi|228688012|gb|EEL41899.1| Transporter, EamA [Bacillus cereus Rock3-29]
gi|228708652|gb|EEL60796.1| Transporter, EamA [Bacillus cereus Rock4-18]
Length = 320
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 92/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKILPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMTLSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GIILLLPFNIGNFTVSNINTSFITSLLYTGIISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKILPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMTLSFFGVILVLLKG 157
>gi|91227433|ref|ZP_01261797.1| putative regulatory protein [Vibrio alginolyticus 12G01]
gi|91188583|gb|EAS74874.1| putative regulatory protein [Vibrio alginolyticus 12G01]
Length = 290
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 91/291 (31%), Gaps = 18/291 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + L A +WG T + T L S L + R L + +
Sbjct: 2 TSAERIQAILLTAIAPTVWGSTYIVTTELLPADSPLLASAIRALPAGLLLIAY------- 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + + +A G + P+I + L +
Sbjct: 55 ---TRCFPNQQWWGKLACLGTLNIGLFFYCLFFAASYLPGGTAALVMSSQPIIVMLLSGL 111
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPV 190
LK ++ IAA+ +L + ++ ++ GI L L S +
Sbjct: 112 VLKSKIALSHCIAAIFGVLGVALIVINETVQISAQGIVLAVLGTLSMASGVVLTKYWGRP 171
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ L + + + + G + + + + ++ G
Sbjct: 172 ENMSTLAFTGWQLLVGGILLLPAALWFEGLPETISLKNLAGYSYLTIVGAVLAYALWFKG 231
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+R + V + + + + V L + + ++ + G +++++ +
Sbjct: 232 IERLPATNVAFLGFLSSVSASVLGYVFLDEILTPLQLLGAGAILVSIFLAS 282
Score = 36.4 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 27/86 (31%)
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
F L F + T ++ + P+++++ S +LK
Sbjct: 57 CFPNQQWWGKLACLGTLNIGLFFYCLFFAASYLPGGTAALVMSSQPIIVMLLSGLVLKSK 116
Query: 282 IDTVRTIVFGIVVIAMVVYLLPTVIN 307
I I V+ + + ++ +
Sbjct: 117 IALSHCIAAIFGVLGVALIVINETVQ 142
>gi|229505922|ref|ZP_04395431.1| hypothetical protein VCF_001132 [Vibrio cholerae BX 330286]
gi|229514350|ref|ZP_04403811.1| hypothetical protein VCB_002000 [Vibrio cholerae TMA 21]
gi|229526511|ref|ZP_04415915.1| hypothetical protein VCA_000639 [Vibrio cholerae bv. albensis
VL426]
gi|229528162|ref|ZP_04417553.1| hypothetical protein VCG_001242 [Vibrio cholerae 12129(1)]
gi|262190582|ref|ZP_06048822.1| putative membrane protein [Vibrio cholerae CT 5369-93]
gi|229334524|gb|EEO00010.1| hypothetical protein VCG_001242 [Vibrio cholerae 12129(1)]
gi|229336669|gb|EEO01687.1| hypothetical protein VCA_000639 [Vibrio cholerae bv. albensis
VL426]
gi|229348330|gb|EEO13288.1| hypothetical protein VCB_002000 [Vibrio cholerae TMA 21]
gi|229356273|gb|EEO21191.1| hypothetical protein VCF_001132 [Vibrio cholerae BX 330286]
gi|262033542|gb|EEY52040.1| putative membrane protein [Vibrio cholerae CT 5369-93]
gi|327485914|gb|AEA80320.1| Putative membrane protein [Vibrio cholerae LMA3894-4]
Length = 299
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 3 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 119 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 179 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRN 289
>gi|11498394|ref|NP_069622.1| hypothetical protein AF0788 [Archaeoglobus fulgidus DSM 4304]
gi|6136575|sp|O29470|Y788_ARCFU RecName: Full=Uncharacterized transporter AF_0788
gi|2649820|gb|AAB90451.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 308
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/276 (9%), Positives = 72/276 (26%), Gaps = 17/276 (6%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG T + L+ +S + R + +
Sbjct: 47 LALVALIWGSTFPVVKIALDSMSPFAFNTVRFFIACLFFLPFL---------------KG 91
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + F L F V++ + + K+ + +
Sbjct: 92 WDFKDGFKIGIASFLGYTFQTVGLDYTTATNAGFITSTYVVLAPIISWLVYKDVFDKRDV 151
Query: 149 IAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
LL + ++ +SG + + + + +
Sbjct: 152 SGVLLAFVGFYFLSGYSGFNIGDILMLFCALFFGAEIAMISHYSRLSNPTMLAFWQSFAI 211
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
F + LI + ++ K S ++
Sbjct: 212 FILSAPFAVFTTTKFEINTTVILCLLITAFFATFVAKMLQNWLQSYTKSSDAAVILSLEG 271
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + SV +L + + V+ ++++A+++ L
Sbjct: 272 VFAHLFSVAVLAEILTPVQYFGAFLILLAVIIVSLR 307
>gi|330817877|ref|YP_004361582.1| drug/metabolite transporter superfamily permease [Burkholderia
gladioli BSR3]
gi|327370270|gb|AEA61626.1| drug/metabolite transporter superfamily permease [Burkholderia
gladioli BSR3]
Length = 311
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 89/293 (30%), Gaps = 16/293 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ S + G LFV + + +G ++ ++ V VL ++ R +
Sbjct: 6 AQAPSSAAVRGALFVALSAVAFGAMAIFGRYAYAAGVDVLGLLIVRFGIGGALLALIAWR 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ V + A + AL Q L + ++ P
Sbjct: 66 RGVAWPRARA------RVRIAAMGALGYVGQSFCYFTALQHAQASLVALLLYLYPAFVTL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L + +L ERL ++ +A +L + +M L +A+++ + ++
Sbjct: 120 LAAWWLGERLTRVKAMALVLCVAGSALMVGGGHGEPLGIALSLAAAVIYSLYIVAGTRAT 179
Query: 194 EGFFI--------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
G L + F + + +
Sbjct: 180 RGVDPLATTAIICIAATLMFTLIALARCAAFGVAPQWPQAGSGWLALVAIALVSTVGAML 239
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
F G+ + ++ P++ + + + + + ++ +++A++
Sbjct: 240 AFFAGLSLLGAARTAMLSTLEPVVTVALAALLFGEALSPMQWAGGVAILVAVL 292
>gi|116786937|gb|ABK24307.1| unknown [Picea sitchensis]
Length = 464
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 27/299 (9%)
Query: 29 FVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
V + + WG + + + L + L V + R++ S + Y
Sbjct: 155 LVLISPFFFWGSSMVAMKEVLPKTGPLFVAAVRLIPSGLLLISFAHYSGKKQPSGLMAWL 214
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ G++ + G + + S V + ++F G L
Sbjct: 215 SVALFGLVDAGCFQGFLAEGLTRTSAGLGSVIIDSQPLTVAVLAAIFYGESIGTIGAAGL 274
Query: 147 QIIAALLIILSLL---------------------IMTLHSGIPLLSLAIAVTWSAYCFAR 185
+ L++L + I TL L A + +
Sbjct: 275 VLGVIGLLLLEVPAFYGNDISETVVSQSEVVQKSISTLWGSGEWWMLLAAQSMAVGTVMV 334
Query: 186 KTIPVGSSEGFFIEMCVLA----IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ + S ++ + L + + G L + ++
Sbjct: 335 RWVCKYSDPVMATGWHMIIGGLPLLVLSVIKHDPAFTGSLQELDYGDWLALIYTSIFGSA 394
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ ++ Y R L+ + + + P+ + F+L + ++ + + VIA+ +
Sbjct: 395 ISYGVYFYNATRGSLTKLSSLTFLTPMFASIFGYFLLDETFSPIQLLGALVTVIAIYMV 453
>gi|162451967|ref|YP_001614334.1| hypothetical protein sce3694 [Sorangium cellulosum 'So ce 56']
gi|161162549|emb|CAN93854.1| conserved hypothetical integral membrane protein [Sorangium
cellulosum 'So ce 56']
Length = 306
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 75/284 (26%), Gaps = 12/284 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G F + + + ++ + ++ ++ L + F + + L
Sbjct: 16 GRTFAVLSAATFALKAIFVKLAYAAHPVDAVTLLALRMGIALPFFLWLARRERGAAEGPL 75
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L+ + F L L FV P + + +G+ +LK+ +
Sbjct: 76 TPGLWGGVLIVGFLGYYLSSLFDFIGLTYISTGLERLILFVYPTLVLLIGAAWLKQPVRG 135
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
A + L L H G + + Y K S
Sbjct: 136 KAWGALAVCYLGLGAAVWHDLEQSGDARAVAIGGAWVFASSVTYALYYIGVGKLASRVGS 195
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + S L + + + I+R
Sbjct: 196 TRLAAYCGAASCLMVLAHYAAAGSPVRLGELPASVWGYAAAMATISTVLPIVLLAAAIRR 255
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
P+L I S IL +P + + +VV +
Sbjct: 256 LGAGRAATFSTLGPVLTIAFSWVILGEPATWQQVVGLTLVVGGV 299
>gi|296136627|ref|YP_003643869.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
gi|295796749|gb|ADG31539.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
Length = 314
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 76/291 (26%), Gaps = 6/291 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S ++ + + A ++WG + T + V R + V +
Sbjct: 2 STSPASLRASALMLLASLIWGTAFVAQTASIGTVGPFYYTGLRFMLGAAVVLAVMALRRR 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++A+ L + F V+ V L
Sbjct: 62 PDPAAHPASNPRSLLRDGGLLGGVVAISISLQQIGLESTTVANAGFI-SSLYVVLVPLLG 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGS 192
+ R+ + A+L + +++ G + +
Sbjct: 121 LLWGRRVGAGVWLGAILAASGMYFLSVRQGYSVRHGDWLELGGALFITVQLLLLGRMAPR 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + L + G L + + +
Sbjct: 181 HDPLQLAVVQFVVCGLLCLGAGVLVESISLEALQRAAWTIFYGGALSVGVAYTLQVVAQR 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
A + ++ + +++ +L Q +D +V ++V LP
Sbjct: 241 HAVPAHAAVIFSMEGVFAALAAWLVLHQSLDARALFGCALVFSGLLVSQLP 291
>gi|169832479|ref|YP_001694866.1| membrane protein [Streptococcus pneumoniae Hungary19A-6]
gi|168994981|gb|ACA35593.1| membrane protein [Streptococcus pneumoniae Hungary19A-6]
Length = 298
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 100/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ +L I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIILAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|260881577|ref|ZP_05404731.2| putative membrane protein [Mitsuokella multacida DSM 20544]
gi|260848403|gb|EEX68410.1| putative membrane protein [Mitsuokella multacida DSM 20544]
Length = 289
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 96/288 (33%), Gaps = 6/288 (2%)
Query: 29 FVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A +WG T + ++ + + R L + + G K
Sbjct: 1 MLLLAAFIWGTTFVAQMVGMDGLGPFTYAAARYLLGFLFLVGLWYAWRGQREGAKRAGTY 60
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + I+ V A+L T+F +I V LG+V L +R++
Sbjct: 61 RAGWKAGLGAGCIMLVATSLQQVAMLYTTAGKTAFIT-ALYIILVPLGAVLLGKRIHLEN 119
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF----FIEMCVL 203
I ALL + L +++ + L V SA + + + + + +
Sbjct: 120 WIGALLALAGLYFLSIRGAVSLSFGDGLVFISALFWTGHILFIDRFASLVDPIELSVTQI 179
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A ++ G + F + G K A+ I+
Sbjct: 180 GVCAAGSLIAALGFETVAVQPILDAWFAIFYGGVMSAGVAFTLQILGQKYAEPGQAAIIM 239
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +SS +L + + V+ + +++ M+V + ++ ++
Sbjct: 240 SFEAVFGALSSWLLLGEHMSAVQVLGCALMLSGMIVTQVRPLLEDRRH 287
>gi|148653646|ref|YP_001280739.1| transporter DMT superfamily protein [Psychrobacter sp. PRwf-1]
gi|148572730|gb|ABQ94789.1| RarD protein, DMT superfamily transporter [Psychrobacter sp.
PRwf-1]
Length = 330
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 108/301 (35%), Gaps = 2/301 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G + + +L+G+ Y+ L+ ++ +V R+L + +
Sbjct: 19 SDAQQRTALKGVILAIVSNLLFGVLYFYSSLLQPLTGTQVFIWRMLSMWVVLVGFLAITG 78
Query: 76 G-GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTR-QGFLTSFSYFVTPVISVF 133
+ + + + + T + + QG + YF+ P++ V
Sbjct: 79 RLSFHINRLRELSSFKQWLWLLLPTPIFFSQLWLFMWAPVNDQGVQVAMGYFLFPLMMVV 138
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G +F ERL+ LQ +A L +L + + L + + + + + ++
Sbjct: 139 FGFIFFGERLSRLQWLAVLFAMLGIGLEMLRTQSVSWATLWVCGTYPIYYILRRLQGITA 198
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L +P + G F G+ + + G+++ +
Sbjct: 199 MTGMLVDLSLFLPIAIGYLVIAAPGNFMFVTGSGLYFMLVASLGVISVLALKTNIDASQI 258
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ G+M Y PL++ V ++ +L +T +G + + ++ + + N+
Sbjct: 259 LPVNVFGMMSYLEPLVLFVLAITVLGDSFETSMLYSYGFIWLGIMFLIAHGIQQIRANRR 318
Query: 314 K 314
Sbjct: 319 S 319
>gi|159184875|ref|NP_354683.2| hypothetical protein Atu1696 [Agrobacterium tumefaciens str. C58]
gi|159140155|gb|AAK87468.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 322
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/294 (14%), Positives = 98/294 (33%), Gaps = 10/294 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G LF+ A + T+ + ++ +++ R + ++ ++ A +F L
Sbjct: 8 RGALFMALAMASFTANDALTKSVTPYINTGQIMFVRGVMTVVLIYIAARHFGALRPLKTL 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +A +L + I S P++ ++FL+E +
Sbjct: 68 LRPIIILRCLCEVTAAVLYLTALGLIEFSNA------SAILQSLPLVVTLGAALFLREPV 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--FFIEMC 201
+ +A ++ + +L++ A+ V S A + + + +
Sbjct: 122 GWRRWVAIIVGFIGVLVIIRPGPEGFTPGALLVVASLAVTAARDLLTRKMYADVPSLAIT 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ V + N L G +L + ++ ++S V
Sbjct: 182 VITAFVNMAVGGLLIVPFGGWQPMNFTIVSHLAGSAILVLVGYQAIILSMRTGEISFVAP 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
YT L + VF + ID+ I ++VI +Y +++ K
Sbjct: 242 FRYTGLLWGFMIGVFFFNEKIDSYTIIG-AMIVIGSGLYTFYRESLRKRSQMAK 294
>gi|163943287|ref|YP_001642517.1| hypothetical protein BcerKBAB4_5563 [Bacillus weihenstephanensis
KBAB4]
gi|163865484|gb|ABY46542.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 311
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/307 (11%), Positives = 102/307 (33%), Gaps = 11/307 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++N+ + L + + +++G ++ + E++ R +++ + +
Sbjct: 1 MIQQNSIERKSLPALKMIISMVIFGSVGFFSVQ-TNLPSFELVFVRCIFATIFLGLCWLI 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ K V ++ L +W F A + Y + P+I +
Sbjct: 60 TGQYKHDKWE----RKEVIQVLICGFFLVFNWVFLFKAFENMSVTVAISVYHLAPIIVLI 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIM------TLHSGIPLLSLAIAVTWSAYCFARKT 187
+GS+ KE+L L +I+ ++ + L++ + + + + +
Sbjct: 116 IGSIVFKEKLTVLSVISIIICFVGALLIAGINKNFSFDSLMSSGMVWGLLAALFYAFTTL 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
G M L +++ L T + + V+ +F
Sbjct: 176 FGKGIKNMSAYAMTFLQTFLGIFLLIPFIDFDAFHGLTQSNWTYIIATGLIHTGLVYYLF 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + I+ + P + I+ + ++ ++ + M + +
Sbjct: 236 FDSLRDLSTKLISILVFLDPAVAILLDTVLTGFRPTLMQVSGITLIFVGMALTFKKSKNK 295
Query: 308 SGKNKTK 314
+ K K +
Sbjct: 296 TQKFKKQ 302
>gi|305666737|ref|YP_003863024.1| hypothetical protein FB2170_10761 [Maribacter sp. HTCC2170]
gi|88708961|gb|EAR01195.1| hypothetical protein FB2170_10761 [Maribacter sp. HTCC2170]
Length = 298
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 93/287 (32%), Gaps = 14/287 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G LF +L+ + + + + L ++ R++++ P + L
Sbjct: 11 GVLFAIVGVVLFSAKAVMVKMAYEYNIDHLSLLLFRMIFAFPFYLVIAFWKR---PLHPK 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + ++ F + F L + L F+ P I V L + K R+
Sbjct: 68 EIGKRDYLWVVFFGFIGYYLASLFDFMGLQYLKAGLERIILFIYPTIVVLLSWIIFKNRI 127
Query: 144 NHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
LQ +A + + +LI + L A T+++Y +
Sbjct: 128 TRLQALAIAVTYIGVLITFWNEVGISGDSIVFGAFLIFLSAFTYASYLVGSGWLIPKFGA 187
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F ++ + + +G N L + + S I R
Sbjct: 188 VQFTAYAMIVSTICVVLHYVFVNGFYLANYPNEVYLLGFMMAIFSTLIPSFLVSAAINRL 247
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
ST I P+ IV + F L + I ++ +V+ +++
Sbjct: 248 GASTFSIFGSLGPVSTIVLAFFFLGEQISQLQFFGMLVVICGVILVS 294
>gi|262158201|ref|ZP_06029319.1| putative membrane protein [Vibrio cholerae INDRE 91/1]
gi|262030079|gb|EEY48725.1| putative membrane protein [Vibrio cholerae INDRE 91/1]
Length = 299
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 86/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 3 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFMSLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 119 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ GI
Sbjct: 179 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKGIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRN 289
>gi|255323245|ref|ZP_05364380.1| integral membrane protein DUF6 [Campylobacter showae RM3277]
gi|255299768|gb|EET79050.1| integral membrane protein DUF6 [Campylobacter showae RM3277]
Length = 297
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 90/293 (30%), Gaps = 14/293 (4%)
Query: 28 LFVFCAYILWGITPL-YTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L +F ++WG+T L Q L+ V ++ R L + + + F+ +
Sbjct: 11 LALFVIAVVWGVTFLPMAQTLKTNGVFTLLFWRFLIAAALMALISLKFTRKI-------- 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++ F +L + +AL +F + V + F+ F +++
Sbjct: 63 DRNSLRFGTFLGALLFAAFTLQTFALKYAPSSTVAFITGLNAVFTPFIALAFFGQKVVVY 122
Query: 147 QIIAALLIILSLLIMT-----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ A L + L ++T G L + F +
Sbjct: 123 AFVGAFLSAVGLYLLTGSELGFGVGEVLSVVCALGFALHIIFTGVLVRRCELYWMVSAQF 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ F G L + F + + + +
Sbjct: 183 AVVAALCFVAAQIFEPRGVVPVLDEAFFVAVAVTSVFATVLAFFVQTAAQRYTTPVKTSL 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ P+ + F + + V+ G+++ +VV + + + K++
Sbjct: 243 IFTFEPVSAGIVGYFFGGEILSGVQIAGAGLILFGIVVSEVGSYYKNKKSRVA 295
>gi|269956721|ref|YP_003326510.1| hypothetical protein Xcel_1933 [Xylanimonas cellulosilytica DSM
15894]
gi|269305402|gb|ACZ30952.1| protein of unknown function DUF6 transmembrane [Xylanimonas
cellulosilytica DSM 15894]
Length = 297
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 89/295 (30%), Gaps = 5/295 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G + I+WGI L+ + +E++S +++ R + + + ++L
Sbjct: 2 TRRGAVLFVALGIIWGIPYLFIRIAVEELSPAVIVAARCVIGALVLLPFALRSGDLRAVL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ G+ + A L +I + L + + +++ +
Sbjct: 62 RRWPLVLAYAGVEIMLAWWLLTDAERYISSSLAGLLVAATPIFATVLALALRIDRRVSPL 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R+ L + + L+ + + + + +
Sbjct: 122 RVVGLLVGLGGVAALAGVDAAAGAPLRPVLQVLLTALCYAVGPMIIARRLGGVSPVAVNT 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V A + ++ + + F + I + +
Sbjct: 182 VALTFAAIAYAPFAVATWPATPPSGKVVASVVVLGLVPTALAFVLLFALIAEVGPAPATV 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y + +V+ V L + + T + F +V++ + + + + ++
Sbjct: 242 ITYLNQAVALVAGVAFLSEEVTTGILVGFPLVLLGAFLAT----RQARRARVAEA 292
>gi|262037266|ref|ZP_06010748.1| transporter, EamA family [Leptotrichia goodfellowii F0264]
gi|261748738|gb|EEY36095.1| transporter, EamA family [Leptotrichia goodfellowii F0264]
Length = 295
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 100/279 (35%), Gaps = 14/279 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A ++G ++ + + + + R + + + +S +
Sbjct: 16 LIVAMTIFGTIGIFVKHI-PLPSSIIALARGIIGIGFLLIFTKIKKIKISFSEI----KN 70
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+L S ++ +HW F A + + Y++ PV + LKE+L+ +II
Sbjct: 71 NFPILSLSGMLIGIHWIFLFEAYHHTTVAVATLCYYLAPVFIIIASPFVLKEKLSLKKII 130
Query: 150 AALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ ++ ++ ++ + I + + + + + + +
Sbjct: 131 CVTVALIGMIFVSGIFKEGGTENLQIKGILFGVGAAIIYATVILLNKHLKNISSYGMTIM 190
Query: 202 VLAIPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ I A+ + + + + L LI L + ++ IK K T+
Sbjct: 191 QIGIAAVILLPYTAVTQNFGNLSFDFLTIVLLLIVGILNTGITYSLYFSSIKELKAQTIA 250
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I Y P++ I S F+LK+ D I +++ A V
Sbjct: 251 IFSYIDPIVAIFLSTFLLKEKPDIYTVIGGILILGATFV 289
>gi|188587415|ref|YP_001918960.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179352102|gb|ACB86372.1| protein of unknown function DUF6 transmembrane [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 278
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 99/278 (35%), Gaps = 9/278 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + +WG ++ ++ + ++ ++ L++ + +
Sbjct: 6 GYFKILISACIWGTVGIFARW-SAMPATDLAFYKTLFACLFLLSIL------PREDLLIT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
KA ++ + + A++ F+ ++ + F+Y+ PVI FL F +E
Sbjct: 59 NKFKAYMVIFLTGILYALNAILFLSSIYLTTLSNSLFAYYTKPVIVAFLAPFFFRETPEF 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--FIEMCVL 203
I+A ++ ++ L ++ S + + + +A C A V V+
Sbjct: 119 RNILAIVISLVGLALILTPSVVSISTQDLAGIALGLCAAISASLVVILVKLVQLPAPIVV 178
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ + + I + + ++ G++ K S +
Sbjct: 179 YYKMVVAILIMLPLVNFQANFHHGQIFIAAIIGVIHTVLPYILYYSGMQVVKASYGITLT 238
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y P++ V I + + + I +++ + + +
Sbjct: 239 YFDPVVASFLGVLIFGEELTYLSLIGGILIISSGAIIM 276
>gi|148984788|ref|ZP_01818041.1| hypothetical protein CGSSp3BS71_09136 [Streptococcus pneumoniae
SP3-BS71]
gi|168493349|ref|ZP_02717492.1| membrane protein [Streptococcus pneumoniae CDC3059-06]
gi|147922810|gb|EDK73926.1| hypothetical protein CGSSp3BS71_09136 [Streptococcus pneumoniae
SP3-BS71]
gi|183576593|gb|EDT97121.1| membrane protein [Streptococcus pneumoniae CDC3059-06]
gi|301800301|emb|CBW32926.1| putative membrane protein [Streptococcus pneumoniae OXC141]
Length = 298
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGILQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + I +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFIGMAMILFAVTLISLKDLFLEK 298
>gi|125624435|ref|YP_001032918.1| putative permease protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493243|emb|CAL98210.1| putative permease protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071222|gb|ADJ60622.1| putative permease protein [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 299
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 95/294 (32%), Gaps = 11/294 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N GTL+ A +WGI+ ++ Q S L + S R+ + + + Y
Sbjct: 2 NVKKQIFKGTLYAVVAGCMWGISGIFGQLFFRDYHGSPLWITSTRLTIAGIIL-LVMSYS 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ ++ + F+ A+ + + PV +
Sbjct: 61 RDHKRFFDVWKSKKNMPTLFLYVFGGVFSVQYFYYVAIQLSNSATATILQYTAPVFIMLY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKT 187
+F ++ ++ +L ++ + ++ + I LS++ + + ++
Sbjct: 121 LFIFQRQVPKPKSVLFVILAMIGVFLLITNGNIKHLSISPLALVSGLLAGVAVVIYSIIP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
P+ G + A +F + + L + + F +
Sbjct: 181 RPLLDKYGALNMTGWGMMLAGIACNIFYPVWRINFRIEPLSIFYVLTISIVGTALAFLLL 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V + T PL + S+ + + + + +V++++++
Sbjct: 241 LRAFQLISPLVVSVATATEPLTSVFLSIPLFGLKLTLLEMVGIVMVIVSVILLS 294
>gi|21110409|gb|AAM38836.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 281
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 1/199 (0%)
Query: 118 FLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT 177
+ V + + L + P ++L +AV+
Sbjct: 83 SQPGVLHQPAAERLAGRAGVERAPAPHPVGSGGLCAAAGVLWLTIDAGAPPWIALGLAVS 142
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-Y 236
+ Y RK + V + G +E L +PAL W G F G T ++
Sbjct: 143 FGIYGLLRKLVAVDAVAGLGVESVYLFVPALLLAAWGEQGHGGAFLSGWSLRTDAMLIFG 202
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
G++ + F+YG++R LS VGI++Y AP L ++ V+ +P D R I F + +
Sbjct: 203 GVVTALPLIGFAYGVRRIPLSLVGILQYIAPSLQLLLGVWFFHEPFDQGRAIGFAAIWVG 262
Query: 297 MVVYLLPTVINSGKNKTKK 315
++V++ +V+ S + ++
Sbjct: 263 LLVFVGDSVVRSRQPVVRR 281
>gi|311032383|ref|ZP_07710473.1| hypothetical protein Bm3-1_17886 [Bacillus sp. m3-13]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 96/294 (32%), Gaps = 12/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + I + ++ + L V +R+L+S+ + +Y + +
Sbjct: 8 YVALAVGVITVSTSAIFVK-LADAPAGVVAFYRLLFSVIILLPIFLY----KYVGELKDI 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + LA H+ + +L ++ + P+ + +F +E+L+
Sbjct: 63 SKRDWLFSMLAGIFLAFHFILWFESLNYTSVASSTVLVTLQPLFAFIGTYLFFQEKLSKK 122
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFFIE 199
+++ L+ I+ +I++ +A
Sbjct: 123 AMVSGLMAIVGSVIISWGDFRISGMALFGDILALVACALVTAYLLFGQDVRKRLSLITYT 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V + + + SG + F++ + F++ +K + +
Sbjct: 183 FIVYGFCCVTLLFYVLISGDPLTGYSSADWIWFILLAIIPTLLGHSFFNWAVKYISTNVI 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P+ V + FIL + + + +V++++ +L K
Sbjct: 243 SMSILFEPIGAAVLAYFILNEMVTWTQFAGGLLVMLSVGYFLKDNRKKKSNIKA 296
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 13/140 (9%), Positives = 45/140 (32%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
+A+AV + + + + + L + + + +
Sbjct: 4 WFNPYVALAVGVITVSTSAIFVKLADAPAGVVAFYRLLFSVIILLPIFLYKYVGELKDIS 63
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
D LF + G+ +F F ++ + +++ ++ PL + + ++ +
Sbjct: 64 KRDWLFSMLAGIFLAFHFILWFESLNYTSVASSTVLVTLQPLFAFIGTYLFFQEKLSKKA 123
Query: 287 TIVFGIVVIAMVVYLLPTVI 306
+ + ++ V+
Sbjct: 124 MVSGLMAIVGSVIISWGDFR 143
>gi|300871197|ref|YP_003786070.1| putative integral membrane protein [Brachyspira pilosicoli 95/1000]
gi|300688898|gb|ADK31569.1| putative integral membrane protein [Brachyspira pilosicoli 95/1000]
Length = 287
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 102/287 (35%), Gaps = 2/287 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M+ L V A I +G P++T+ + E S + ++ +R ++ +FF I+ +
Sbjct: 1 MINVLLVIIASIAYGFLPIFTKNIIRENYSSVAIVFYRYAFTAIFLFFIILIRKKSFKID 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K ++ T + + + V ++++
Sbjct: 61 KRQFFELILFSIIGLGLTFFFLSLSLLYISAGLTNMIHFGYPVVVIILMAIVYKEKINIL 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + +++L+ ++ + +L VT+ Y + K +
Sbjct: 121 KIISVISAVIGIVLLTRVVEVESFKGVIYALITTVTYGVYIISNKKASFAKLDTMVSLFY 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ + ++ + FL L F + YG+K+ S I
Sbjct: 181 MSLFVSIVFFIFGIATNSLKMIDSINVFNNFLATSLLCTIFSLGLLLYGVKQLGSSLASI 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P +++S+FI + + +VV++ + ++ + I +
Sbjct: 241 LNMFEPTTTVIASIFIYDETLTINILFGSILVVMSTIFMIMSSKIKT 287
>gi|295099805|emb|CBK88894.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Eubacterium cylindroides T2-87]
Length = 294
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 78/290 (26%), Gaps = 4/290 (1%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L +WG L T LE V+ R + + + I ++
Sbjct: 8 LICLLVAAIWGGGFLATAGALEAFDPFSVLMIRFIGAAIVSWIVIKVKKLKVTKEALIKG 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V M + A +++ + + ++
Sbjct: 68 SISGVLMYLAFAFQTFGLDLTNTGQNAFLTSVNVVLVPYISWFL---FKRKPMGIQVFAS 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I A + LSL H L I + A + + I +
Sbjct: 125 FICLAGIACLSLSSDGFHFSFGDLLSLICAFFFASQIISLEFATKNCDSTVINTIQMCAA 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
A+ + + + L + F + + K S+ ++ T
Sbjct: 185 AIVSIPFALILEDFPTSIDTNVILSCLYMICIATWLAFQLQTLAQKYTDASSASLLLCTE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
L + F+L + ++ I++++ I K K++
Sbjct: 245 SLFANIFGYFLLHEEKTLTMVFGGLLIFISVILVESSDRIKPVLAKLKRT 294
>gi|304317309|ref|YP_003852454.1| hypothetical protein Tthe_1881 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778811|gb|ADL69370.1| protein of unknown function DUF6 transmembrane
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 300
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/295 (10%), Positives = 88/295 (29%), Gaps = 11/295 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G ++F + + + L V+ ++ R + + +
Sbjct: 3 KGYFYLFLTVFFFSTYEVVGRTLTNLVNPYQLNFVRFFIGGLILLPIAL---KNIKSKNI 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +++ T + F + L++ + P+ + + S L E+L
Sbjct: 60 RMTWQDFLLLVLIGLTNVVFSMSFLQLGINMTSASLSAVIFSSNPLFVMIVASFVLGEKL 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-------SAYCFARKTIPVGSSEGF 196
N +I +L I+ L+I+ + + + +
Sbjct: 120 NSTKIYGLILGIIGLVIVFYKQLNVGGNHLVGIILLVLSSITYGIYTVIGKKFTVKYDSV 179
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ I +L + ++ F L L + + + G+
Sbjct: 180 VMNSFSFIIGSLMLLPILLYNKYPVFNLPAKAIPQMLYLTVFVTGIAYYTYFLGLSSVNT 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ + P+L + + L + I I +++I + + + +
Sbjct: 240 GVGSMVFFAKPVLASIIASIFLSEKITIQLVIGTIVILIGIFIVQKDNIAIFSRK 294
>gi|254673267|emb|CBA08321.1| probable integral membrane protein [Neisseria meningitidis
alpha275]
gi|325201732|gb|ADY97186.1| putative membrane protein [Neisseria meningitidis M01-240149]
gi|325208524|gb|ADZ03976.1| putative membrane protein [Neisseria meningitidis NZ-05/33]
Length = 300
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 89/298 (29%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDILGSGWMLVAAVCFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + + + ++ + + P ++L G+ + K
Sbjct: 175 LAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQR 292
>gi|255531332|ref|YP_003091704.1| hypothetical protein Phep_1428 [Pedobacter heparinus DSM 2366]
gi|255344316|gb|ACU03642.1| protein of unknown function DUF6 transmembrane [Pedobacter
heparinus DSM 2366]
Length = 296
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/276 (13%), Positives = 89/276 (32%), Gaps = 3/276 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T + + ++ ++++ +RVL + +F + L + K
Sbjct: 12 LLILHLTVFIWGFTGILGALIS-INAVQLVWYRVLIASITLFVYFKFSKTSLKVEKRQFL 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G +V IL +T + + + + + + L
Sbjct: 71 AFFFTGSIVALHWILFFQAIKVSTVSVTLVCLSSFTLFTAILEPLIKKQKLQTADIIVGL 130
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
II + +I I LS A+A + A + F E+
Sbjct: 131 MIIFGIYLIFKFESRYTSGIILGLSAALASSLFATINSVLVQKSNPVIIGFYEITAAFFW 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
Y +++G E F L ++ + + + ++ V ++
Sbjct: 191 ITLYRLFDGSLLLERFSLSTSDWLYLMLLGTICTALAYVAGVAVMRTLSAFRVALVTNLE 250
Query: 267 PLLMIVSSVFILK--QPIDTVRTIVFGIVVIAMVVY 300
P+ I+ + + + + I++ A+ +Y
Sbjct: 251 PVYGILLAFIFFGTKEAMSIGFYLGAVIILAAVFLY 286
>gi|223986020|ref|ZP_03636050.1| hypothetical protein HOLDEFILI_03356 [Holdemania filiformis DSM
12042]
gi|223962020|gb|EEF66502.1| hypothetical protein HOLDEFILI_03356 [Holdemania filiformis DSM
12042]
Length = 295
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 78/269 (28%), Gaps = 4/269 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A +++G L+ + L +S + R +F L +
Sbjct: 8 LISAMLIFGSLGLFVRQLT-LSSALIAFFRAAIGGCFLFLYQCLRRKPPRLPQSRKSRIA 66
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE---RLNHL 146
+ + + + + ++ + + + +F F + L
Sbjct: 67 LLMSGILLGSNWVFLFEAYRLTTVSIATLCYYLAPILVALFVLFRSRRFSGKAALLLILG 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
LLI + L L A+ ++ ++A
Sbjct: 127 LTGLCLLINPGSALGIHPGLGIGLGLIAALMYAGIILINPYFKEVDGLDSSCLQLLIAAA 186
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF + + + L L+ + + ++ + R +T Y
Sbjct: 187 VLFGYLLVQPALWNGLEISLSQWGLLLLLGIVHTGLAYALYFSALPRLDSTTAAFSSYLD 246
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
P+ I SV L + ++ ++ + +++
Sbjct: 247 PVSAIFFSVIFLHEQLNVLQLVGAVLILG 275
>gi|149928293|ref|ZP_01916536.1| RarD protein [Limnobacter sp. MED105]
gi|149823022|gb|EDM82264.1| RarD protein [Limnobacter sp. MED105]
Length = 300
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 115/289 (39%), Gaps = 5/289 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G A +L+G YT L+ +S E+ R+L +LP + +++ S+
Sbjct: 3 KGVFLSILASVLFGSMYYYTTLLDPLSGEEIYGWRMLLTLPVMTLFLIWTKEWGLIKSIA 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K L S+ +L + F++A L S YF+ P++ V +G + ++
Sbjct: 63 LRLKTEWKLYLALPASSLLLGIQLWLFLWAPLHGHAMNVSLGYFMMPLVMVLIGRFYYRD 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+LN LQ +A LL +L + +G + + Y F ++ + G +
Sbjct: 123 KLNQLQKLAVLLALLGVTNAVFQAGGFAWTSLLVCLGYPYYFVLRSKFKIDNLG-GLWFD 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L + L G + L +I G+L++ + + S G+
Sbjct: 182 MLLMTPLALYFALNGEGLAQMTGLQLQLPLLIILLGVLSASALIAYILSSRMLPFSLFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ Y P+L++V + I + I + + +++ + + ++ +
Sbjct: 242 LGYVEPVLLVVVAFLI-GESIAKQEWPTYLAIWLSLSLLAVEGLLKLYR 289
>gi|18976689|ref|NP_578046.1| hypothetical protein PF0317 [Pyrococcus furiosus DSM 3638]
gi|18892267|gb|AAL80441.1| hypothetical protein PF0317 [Pyrococcus furiosus DSM 3638]
Length = 280
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 90/289 (31%), Gaps = 13/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L + A +WG T + +E + I+ R + +F A+
Sbjct: 2 NERRKAELVLLGATFIWGSTFPVMKIGVEDFPPITFIALRFGIASFVLFLAL-------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
A+ + L + GF I L ++F + V + F+ +F
Sbjct: 54 ---RKHIRKDALFPGLILGFTLFLGHGFQIVGLKYTTPSNSAFITSLYVVFTPFIAFLFF 110
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-FARKTIPVGSSEGFFI 198
++ L + L ++ L +++ A+ V + F + + G +
Sbjct: 111 RKGLKMFDAFSLSLAVIGLYLISNAELRLNYGDALTVVAALSFAFQIVLVEYFGNLGVGL 170
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + V+ G G + + F + + +
Sbjct: 171 AFWQIFWNFILSTVYAGIFEGISLPSDPKVLGGIIYTGIFATALSFTLQVKYQPKVESYK 230
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I+ + P+ + ++ L + + ++++A+ + L N
Sbjct: 231 AAIIYSSEPIFAHLLALAFLNDRLPPKGYLGAFLILLAVWLELYQERKN 279
>gi|89099847|ref|ZP_01172719.1| hypothetical protein B14911_06988 [Bacillus sp. NRRL B-14911]
gi|89085405|gb|EAR64534.1| hypothetical protein B14911_06988 [Bacillus sp. NRRL B-14911]
Length = 302
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 100/296 (33%), Gaps = 11/296 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV--SVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +M + LWG+ + + L S +E++ R + + + ++ G
Sbjct: 1 MKKLMPYFAISAGASLWGLIAYFIRGLSGFGFSSMEIVGIRAVTAAAALLLIGLFLGPGR 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LK + + + ++ + + +P L +F
Sbjct: 61 LALK---RTSDIGLFAGTGICSIVFFNWCYFTSINLMDISIAVILLYTSPAFVAVLSYIF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
LKE++ +IIA + +++ G LS+ A A +
Sbjct: 118 LKEKITGRKIIAVCGTVAGCILIAGVGGGSGLSVIGVVTGLGAGLGYALYSIFGKFALQK 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E F + + + + FL L L L + ++++G++
Sbjct: 178 YEPFTVTLYTFVTASAVLLPITRLWEKASLFLQPEVLFLGLGLGLLPTVLAYFLYTWGLE 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + S ++ P++ I V + + + ++ I+++ +++ LP
Sbjct: 238 KTESSKAAVIATIEPVVAIFMGVALYSESLGYMQLSGSIIILLCVILVNLPERKGR 293
>gi|150391469|ref|YP_001321518.1| hypothetical protein Amet_3740 [Alkaliphilus metalliredigens QYMF]
gi|149951331|gb|ABR49859.1| protein of unknown function DUF6, transmembrane [Alkaliphilus
metalliredigens QYMF]
Length = 306
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 94/286 (32%), Gaps = 18/286 (6%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ ILW + + +E++S L + R+L++ +F +++ + K +K
Sbjct: 9 LMTFGTILWAGAFIAGKLGVEKLSPLLLTYFRMLFATIIIFPILIFKDKNWKIEKKLIKY 68
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
G++ L AL S P+++ V LK+ L+ +
Sbjct: 69 VLLTGLVGMIGYHLLF-----FTALRYTTASNASIINATNPILTSIFAYVILKDHLSPRR 123
Query: 148 IIAALLIILSL------------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
I L + + + + + G ++ L ++ + +
Sbjct: 124 IFFILTAFIGVLTTIIDWDFINLIHFSFNKGDLIMILGTTCWALYSIIVKQVMHHFTPFK 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ ++ L + +G +P + I IK
Sbjct: 184 LTAYTFLASVVLLTPFALYEMMYTDFSSIGIMPFYAVFYMAIFPTVMGYTIQQVVIKELG 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
ST + P+ ++ + LK+ + + I G+++ ++ +
Sbjct: 244 PSTTSLFINLVPIFSVLFATVFLKESFNYLNLISGGLIIYSVFSFS 289
>gi|325293081|ref|YP_004278945.1| transmembrane protein [Agrobacterium sp. H13-3]
gi|325060934|gb|ADY64625.1| transmembrane protein [Agrobacterium sp. H13-3]
Length = 322
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 97/294 (32%), Gaps = 10/294 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L + A + T+ + ++ +++ R + ++ ++ A +F L
Sbjct: 8 RGALLMALAMASFTANDALTKSVTPYINTGQIMFVRGIMTVVLIYIAARHFDALRPLKTL 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +A +L + I S P+I ++FL+E +
Sbjct: 68 MRPIIILRCLCEVTAAVLYLTALGLIEFSNA------SAILQSLPLIVTLGAALFLREPV 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A ++ + +L++ S A+ V S A + + + V
Sbjct: 122 GWRRWAAIIVGFIGVLVIIRPGPEGFTSGALLVVASLAVTAARDLLTRKMYADVPSLAVT 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY--GLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A + G + + +L + ++ ++S V
Sbjct: 182 FVTASVNMAVGGLLIQPFGGWQPMNFMILSHLAGSAVLVLVGYQAIILAMRTGEISFVAP 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
YT+ L + VF + ID+ + ++VI +Y +++ K
Sbjct: 242 FRYTSLLWGFMIGVFFFNEKIDSFTIVG-AMIVIGSGLYTFYRESLRKRSQMAK 294
>gi|323143871|ref|ZP_08078535.1| putative membrane protein [Succinatimonas hippei YIT 12066]
gi|322416343|gb|EFY07013.1| putative membrane protein [Succinatimonas hippei YIT 12066]
Length = 311
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 88/300 (29%), Gaps = 15/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPL--YTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ G A + +G PL + E + VI +R + + ++
Sbjct: 2 SNTDKAWGVFCAVIAGVSYGTNPLGGLIMYSEGFNPSSVIFYRFILAAVCFAVVMLMNRI 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + + V + L L S +F+ P+ +
Sbjct: 62 SFKV------SLYELTTMAVLGLLFCVSALTLFSSFLYMDAGLASTLFFIYPIFVALTMA 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIP 189
+ E+L+ IIA + +L + ++ G + F K+
Sbjct: 116 LLFHEKLSFTIIIAIVFTLLGIALLYRGDGEGFNLKGVLCVLGSAVSYCIYMVFINKSKI 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S+ M + + + + S I + +
Sbjct: 176 MMSAIKMNFYMAIFCLLGVVLFSFTASSNRLLPLNSPIAFMGAIFLAIVPTIISLTFMVK 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IK + I+ PL + V + + I +++ ++V + + +
Sbjct: 236 AIKIIGSTPTSIIGALEPLTAVAIGVLLFNELFTLKMAIGIALILTGVLVLIAGSELKEK 295
>gi|320167060|gb|EFW43959.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 754
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/306 (12%), Positives = 93/306 (30%), Gaps = 21/306 (6%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
++G L +F A + +LE V + + R+ ++ + + ++ +
Sbjct: 369 LLGYLVLFIALLSVSSLGAAQLYLEGVQPVLSGTWRLQAAVVFLLPMCLIQLTRVTPAER 428
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K +L + W Y L ++ + ++ + + ++R+
Sbjct: 429 VAILEKKNILLCVGLAVALFVWVATFYVALGFTSLAHAYLFNNLHSATLIIYRLVRRQRV 488
Query: 144 NHLQIIAALLIILS-------------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L+I+ LL L + + GI LL + + AY ++
Sbjct: 489 LPLEILGTLLAFLGGGLTLVKASGGPDANSVLIGDGIALLGSLGGLLYFAYAKQLRSAVP 548
Query: 191 GSSEGFFIEMCVL-------AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + S +L + +
Sbjct: 549 LYIYMLPVTFLNMTLNLCLSFAIEDTSFTASSVSQQPFGWLSAQWIWGGVYLGLVTVVLG 608
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI-LKQPIDTVRTIVFGIVVIAMVVYLL 302
++ +K + ++ P++ V + I ++ D +++I VV L
Sbjct: 609 MVLYVALLKILPPLVISLVMLLEPVIGTVIGIVIGVQGIPDEWTISGSVVLLIGTVVVTL 668
Query: 303 PTVINS 308
+S
Sbjct: 669 ANARSS 674
>gi|315607763|ref|ZP_07882756.1| integral membrane protein [Prevotella buccae ATCC 33574]
gi|315250232|gb|EFU30228.1| integral membrane protein [Prevotella buccae ATCC 33574]
Length = 292
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 81/287 (28%), Gaps = 3/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L A + +G PL T + + V+ V+ +R ++ +++
Sbjct: 4 SDKVKGFLAAVVAAVCYGTNPLGTLPLYADGVNSASVLFYRYGLAVLMFGVLMLFRGEHF 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ +G+ ++ I A + + F V
Sbjct: 64 AIRPGHAIRFSLLGVFFAMSSTTLYVSFHHIAAGIASTLLFVYPVMTAVLMTVFFHERVT 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ L + + ++ S + + ++ A
Sbjct: 124 WGTSISILLALLGVGLLYQGDGHARLSTVGFTLVMLSSFLYAVYIISVNRWHTDMSPLKF 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFF-LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
VL V++ SG G L + I + +
Sbjct: 184 TFWVLVFCWATIGVFSVMSGEPLMLLHGPKQWGCATQLALLPTVLSLFFMNISISKIGST 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
IM P+ ++ +F+ + + ++++ + + +L
Sbjct: 244 PSAIMGALEPVTAVIIGIFVFSETFTLRLAVGILLILLGVTLIILKR 290
>gi|297537457|ref|YP_003673226.1| hypothetical protein M301_0262 [Methylotenera sp. 301]
gi|297256804|gb|ADI28649.1| protein of unknown function DUF6 transmembrane [Methylotenera sp.
301]
Length = 311
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 95/306 (31%), Gaps = 21/306 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE------QVSVLEVISHRVLWSLPGVFF 69
+ AS ++G L V A + + + V +I+ R+ +S P
Sbjct: 5 TKQASRDALIGALMVLAAAVTVSSKAIMVKLAYAYAEPFPVDASTLIALRMAFSAPFFIA 64
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
++ ++ + ++ A+ +L L+ L ++ P
Sbjct: 65 LAIWARASDAVPTISSQDAWAIALLGILGGY--GPMLLDFAGLVYVTAGLERIILYIYPT 122
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH-------------SGIPLLSLAIAV 176
I V L + K + A L + ++ H G L++ +
Sbjct: 123 IVVLLSAAMFKHHIGKRVYFALLATYAGVALVVGHDVLTVKSGSAETILGASLVAASAVA 182
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
+ + + IP + F + A A L L ++
Sbjct: 183 YAAYLIASGRLIPRVGASLFTAYTMLAATVASAAHYATTSHQVTILHLPTQVYLLSMLMA 242
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ + + GI + S ++ P+ I + L + I ++ +V+I
Sbjct: 243 VVATVLPAILLNVGIHKIGSSKAALISSIGPVSTIFLASIFLGEGITLLQLAGTCLVLIG 302
Query: 297 MVVYLL 302
++V L
Sbjct: 303 VLVISL 308
>gi|302539363|ref|ZP_07291705.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302448258|gb|EFL20074.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 309
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 89/280 (31%), Gaps = 18/280 (6%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
A ++WG T L T L + L R L + + + K
Sbjct: 11 ALTVLAPVVWGSTYLVTTELLPEGRPLLSALLRALPAGLVLLLI----------GRVLPK 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
LV + + A G + + + P+I + LG+V LKER+ +
Sbjct: 61 GIWWWRALVLGVLNIGAFFYLLFVAAYHLPGGVAALVMAIQPMIVLVLGAVLLKERIKRI 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-------FFIE 199
++ L + ++ L L + I + G
Sbjct: 121 HVLGCALGTAGVALLVLQPNAGLNVTGVIAGLLGALSMASGIVLTKRWGRPEGVGLLPFT 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L + L + G + F + + I+ G++R TV
Sbjct: 181 GWQLTVGGLVLLPIALIGEGLPGEITAENLWGFAYLGIIGALIAYAIWFRGVQRLPALTV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + +PL + F+L Q + ++ + VV ++V+
Sbjct: 241 SFLSFGSPLTATLLGWFVLDQALSPLQILGALTVVASVVL 280
Score = 40.7 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 25/75 (33%)
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
L+ L F + ++ P++++V +LK+ I +
Sbjct: 63 WWWRALVLGVLNIGAFFYLLFVAAYHLPGGVAALVMAIQPMIVLVLGAVLLKERIKRIHV 122
Query: 288 IVFGIVVIAMVVYLL 302
+ + + + +L
Sbjct: 123 LGCALGTAGVALLVL 137
>gi|229845515|ref|ZP_04465643.1| hypothetical protein CGSHi6P18H1_07753 [Haemophilus influenzae
6P18H1]
gi|229811531|gb|EEP47232.1| hypothetical protein CGSHi6P18H1_07753 [Haemophilus influenzae
6P18H1]
Length = 292
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/289 (20%), Positives = 123/289 (42%), Gaps = 8/289 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A L+G ++ L+ +S ++ +R++++ P V +I F + L
Sbjct: 3 KGILVSLLASFLFGYMYYFSTLLKPLSGTDIFGYRMIFTFPFVLLSITLFKQKAALIERL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K K P + ++ F++A SF Y + P++ V G VF KE
Sbjct: 63 KRIQKRPHLALSYLLCGLLMGFQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRVFFKE 122
Query: 142 RLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R++ + IA ++ L ++ + L G+ ++ I + ++AY RK + F +EM
Sbjct: 123 RISTFKFIAVIIATLGVISNIVLKGGLSWEAIVICLGYTAYFSIRKALKNTDLASFCLEM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++++ + N L+ GL++ + ++ +G
Sbjct: 183 LSLMPVSIYFA---LQTDFATVQQTNPFIWGLLVLLGLISGTALIAYVIASNMLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ Y ++M+ S I + ID+ +F +VIAM++ ++ V
Sbjct: 240 LLGYVETIMMLCVSFLI-GEQIDSESYPLFICLVIAMILVMVDGVYKQH 287
>gi|238788692|ref|ZP_04632484.1| hypothetical protein yfred0001_38950 [Yersinia frederiksenii ATCC
33641]
gi|238723287|gb|EEQ14935.1| hypothetical protein yfred0001_38950 [Yersinia frederiksenii ATCC
33641]
Length = 349
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/308 (12%), Positives = 96/308 (31%), Gaps = 35/308 (11%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G + +L G T + + L + + R + ++ +
Sbjct: 25 RRQGYALAIISAMLLGFTGIIIRILTAHYHLPTSVLAFWRAALVAAVLLPILLVTKPQWA 84
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ +LAV G + ++ +++ + + +VFLG +F
Sbjct: 85 KLRRDQVKFYLSY-----GLLLAVFNGLWTESVALNGASISTILVYCSVGFTVFLGWIFY 139
Query: 140 KERLNHLQIIAALLIILSLL------------------IMTLHSGIPLLSLAIAVTWSAY 181
+E + +++ ++ +L + L SG+ +A +
Sbjct: 140 QEYMGWRELLVIIISLLGCFLVSDGVNITAADFNFIGLFIGLASGVGYSFYTLAGRIATD 199
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG---------FSGGEHFFLGNIPDTLF 232
+ GF ++ L + G F + L
Sbjct: 200 RRYPVWNTILYVFGFSAGYQLIFNQLLLWFPVQGLQSMVGNLLFLSMGAEGVQWSGWWLL 259
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
LI F +F+ +K L+ ++ + V + ++L + + + + +
Sbjct: 260 LILAAGPTLLGFGLFNLSLKTLPLAVASLLLTLELVFTAVIAYYLLGEVLSASQLLGSAL 319
Query: 293 VVIAMVVY 300
V++ +++
Sbjct: 320 VLLGVLML 327
>gi|108805399|ref|YP_645336.1| hypothetical protein Rxyl_2607 [Rubrobacter xylanophilus DSM 9941]
gi|108766642|gb|ABG05524.1| protein of unknown function DUF6, transmembrane [Rubrobacter
xylanophilus DSM 9941]
Length = 295
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 84/282 (29%), Gaps = 15/282 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A G P+ + + ++ L ++ R + + + F G + +
Sbjct: 13 LYLLLAVFFLGTNPVAVKLAVREIPPLPFVALRFVAAGLLLLAVARVFGG-----RGAPQ 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ A + ++ F + T+ Y PV + LG ER
Sbjct: 68 ARDLAALAGVGALGVGLNNVAFTLGVSMTTASDTALIYAAVPVWGMLLGLALGLERPERR 127
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ L L + ++ G S A S + +
Sbjct: 128 GVAGVALAFLGVALIVWSGGGEAGSSLEGNLLVALATVCWGSYAVLSLPLLRAYPPVVVA 187
Query: 207 ALFYVV---------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
A + G G L+ +F F + G+ + +
Sbjct: 188 AYTMLFGGLAAVPAALPGLLEPGWLGAGGTAWAATAYSTLLVAAFGFWAWQRGVSQTGAN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
V + +Y L+ + S V +L + + R +V+ + +
Sbjct: 248 RVLVYQYLITLVGVASGVVLLGEGLSPARLAGGAVVLAGVYL 289
>gi|322391718|ref|ZP_08065185.1| DMT superfamily drug/metabolite transporter [Streptococcus peroris
ATCC 700780]
gi|321145428|gb|EFX40822.1| DMT superfamily drug/metabolite transporter [Streptococcus peroris
ATCC 700780]
Length = 302
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 100/299 (33%), Gaps = 10/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ GT++ A I WG++ Q+L +S + + + R++ + + S
Sbjct: 2 SRLLKGTIYTIVAGIAWGLSGTSGQYLMAHGISAILLTNIRLIIAGLLLVIMAYARSKEQ 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L ++ +L L ++ ++ A+ + +V P+ + +
Sbjct: 62 LLAFVKDRDSLKSLLLFSLFG-LFLNQFAYLAAIQETNAGTATVLQYVCPIGILLYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ +II+ +L I ++ H L + ++ + I +
Sbjct: 121 DRVAPTIAEIISIVLAIGGTFLIATHGQLHELSMTPAGLFWGLFSAFTYALYIIIPITLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + + + + F+ + F + +F G
Sbjct: 181 QKWGSMPVIGIGMLFSGILASPFTGLFHADLSFSSDLLSAFVGIILIGTVFAYTLFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ P+ + + I+K+ + I +++ A+++ L ++ K
Sbjct: 241 SMIGPVKSSLLASIEPISAVFFAFMIMKEQFYPIDFIGMAMILSAVIMISLKDLLLEKK 299
>gi|291287455|ref|YP_003504271.1| hypothetical protein Dacet_1546 [Denitrovibrio acetiphilus DSM
12809]
gi|290884615|gb|ADD68315.1| protein of unknown function DUF6 transmembrane [Denitrovibrio
acetiphilus DSM 12809]
Length = 291
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 88/291 (30%), Gaps = 13/291 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F+ A +LWG T F S L V + R+L G+ + +
Sbjct: 3 KGVFFIIGAAMLWGTTGTTQAFAPMGASPLTVGTMRLLIGGFGLLIVAIVGRSFTGGKFN 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ ++ LT T + P + LG V LKE+L
Sbjct: 63 PVHVIAGAVLVAIYQIAFFSAVN------LTGVAVGTIVAIGSGPAFAGVLGKVVLKEQL 116
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF------ 197
+ IA L ++ ++ L + + + ++ +
Sbjct: 117 DVKWYIATFLAVVGCTLLVLSGESEVSVNPLGILYALISGFGYAAYTMIVKVMLEKARGN 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ +L ++ F + + + +F+ G+K ++
Sbjct: 177 AVIALLFFGGAIIMLPALFVYDIAWIFTEKGIFSMAYLGLFATTLSYILFAKGLKLITVA 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ PL V + +L + ++ + + + +VV + S
Sbjct: 237 KTTTLSLAEPLTAAVLGIIVLGETLNIMVALGMLCIFTGIVVLSVERQKLS 287
>gi|218288566|ref|ZP_03492843.1| protein of unknown function DUF6 transmembrane [Alicyclobacillus
acidocaldarius LAA1]
gi|218241223|gb|EED08398.1| protein of unknown function DUF6 transmembrane [Alicyclobacillus
acidocaldarius LAA1]
Length = 300
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 88/289 (30%), Gaps = 11/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ILWG++ Q L + V +++ R+ + + A G
Sbjct: 8 RRFRGIGLALLGSILWGVSGTAAQVLFQVDHVDPAWLVAVRMTVAGLLLLAASCA-KDGA 66
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ AV F L + A+ + ++ P + V S
Sbjct: 67 RVFAPWRARQTAVRTAAFGLAGLLGVQYTYFAAIHAGNAATATVLQYMAPTVIVGYASAR 126
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R LQII L +L L++ + ++ + + ++ +P+
Sbjct: 127 SRRRPTALQIICVGLALLGCLLLVTNGHIERLAVSGACVAWGLLSAVAVAIYSIFPVPLI 186
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ G + V L L F ++ +
Sbjct: 187 AAFGPLSITAWGMLVGGAAVGLATAPYLPVPHLSAEAWCLVAFVVVFGTLVPFYLYLASL 246
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + ++ PL SV +L QP+ + G V++ + +
Sbjct: 247 RDITPADASLVASGEPLAATALSVTVLHQPLTWAALLGMGCVLLTVTLL 295
>gi|242277883|ref|YP_002990012.1| hypothetical protein Desal_0406 [Desulfovibrio salexigens DSM 2638]
gi|242120777|gb|ACS78473.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
salexigens DSM 2638]
Length = 290
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 89/284 (31%), Gaps = 17/284 (5%)
Query: 27 TLFVFCAY--ILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L V A ILWG + + ++ ++ +++ RVL++ + K
Sbjct: 5 LLLVALAVVHILWGGGFIVLKMAQEFFTIEQILLGRVLFASLLYLIL------WSRIPKP 58
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +L+ + + + F L TP+ + KE++
Sbjct: 59 SYQKGDWKMLLLLALCEPFLLFTFETLGLQYTSASQGGMIVACTPMTVAIGAYLVYKEKI 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLL--------SLAIAVTWSAYCFARKTIPVGSSEG 195
+ + L + + I++ SA C+A + +
Sbjct: 119 SRRCMAGILFAVAGVGIVSAFGEANEHGSNPLLGNFFIFCAVLSATCYALTVKHLAARYH 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F + A + L + + V+ + +Y + R K
Sbjct: 179 FMYLSAIQVFGATILFLPGALMSPMPENLNWQAFGALVYLGLGITFLVYFVINYALTRIK 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ V + P+ + + IL + + ++ +V+ M +
Sbjct: 239 AAHVILFSNLIPVATLALAFLILGETLTPIQYGGAALVLGGMFL 282
>gi|148378715|ref|YP_001253256.1| transporter, EamA family [Clostridium botulinum A str. ATCC 3502]
gi|153931905|ref|YP_001383099.1| EamA family protein [Clostridium botulinum A str. ATCC 19397]
gi|153937499|ref|YP_001386648.1| EamA family protein [Clostridium botulinum A str. Hall]
gi|148288199|emb|CAL82267.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502]
gi|152927949|gb|ABS33449.1| integral membrane protein [Clostridium botulinum A str. ATCC 19397]
gi|152933413|gb|ABS38912.1| integral membrane protein [Clostridium botulinum A str. Hall]
Length = 293
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 99/285 (34%), Gaps = 12/285 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ G L+ + + S ++ R + V + +S
Sbjct: 9 LLSMLIVGSIGLFVRSI-PFSSAQIALVRGILGCAFVLVFSLMSGQKISGKNI----KAN 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S L+V+W A + Y+ PV+ + L + LKE L+ L+++
Sbjct: 64 LWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLC 123
Query: 151 ALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ L + + + + + +G + L
Sbjct: 124 IVAALVGLTCIAGVSKKAGANDFVGILYGLGSAVLYATVIFLNKCLKDIKGIESSIVQLG 183
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ + + S G + P L LI + V+ ++ ++ +V +
Sbjct: 184 VSAISLLAYVLMSEGFKLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVAALS 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P++ I+ + L + + V+ I +++ A +
Sbjct: 244 YIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKK 288
>gi|54294791|ref|YP_127206.1| hypothetical protein lpl1868 [Legionella pneumophila str. Lens]
gi|53754623|emb|CAH16107.1| hypothetical protein lpl1868 [Legionella pneumophila str. Lens]
Length = 300
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 85/297 (28%), Gaps = 10/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G+ + + L+G + +SV ++ R L S + ++
Sbjct: 1 MNSQEQRGSFYAILSGFLYGFIGYFGISAIHGDLSVSNMLFWRFLISSIFILIVLI---- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + YA L L+ +F PVI +
Sbjct: 57 -PQLKNINDTYKSMFTAFLSGVLYYGLSTLLYFYASLYIGSGLSMVIFFTYPVIIMVFNY 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSS 193
F + + + +A +I++ + ++ + I I + Y +
Sbjct: 116 FFYSQTIPKIYYLAISVILIGMALLIDVNEIAFDLWGIFLGLASAFFYACYIVSSKNNEI 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ V ++ + + + + +K
Sbjct: 176 SPNVSTLMVCLGCMTTSLIVACLDQTFKVPISFPVWLNLFGIGLVATVIPILLMLHSLKY 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ P+ +++ V +L + + + V+ ++ L IN +
Sbjct: 236 ISSEKASILSVLEPVFVVIFGVVLLGEELKPWHALGIVFVLAGALITLFSHRINLNQ 292
>gi|229010350|ref|ZP_04167557.1| hypothetical protein bmyco0001_8120 [Bacillus mycoides DSM 2048]
gi|228750922|gb|EEM00741.1| hypothetical protein bmyco0001_8120 [Bacillus mycoides DSM 2048]
Length = 295
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 90/281 (32%), Gaps = 13/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + +
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIAFLLSGLIFY--------KHLFKV 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K V A++L + + F + F +T + L ++FLK
Sbjct: 61 DFKTVKYAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPILSAIFLKHIPEKK 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ +L I+ + ++TL S G + ++ + A + +
Sbjct: 121 VILGIVLTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGNVTKHVNSIALGVVQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L LF ++++ + L + F + + + G++
Sbjct: 181 LGFVGLFSLIFSLVMETPKLPSTINSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ +
Sbjct: 241 FSLEPVFSAGFAFVFTGETLTGKGYLGATLILLSVLIAEID 281
>gi|70730749|ref|YP_260490.1| rarD protein [Pseudomonas fluorescens Pf-5]
gi|68345048|gb|AAY92654.1| rarD protein [Pseudomonas fluorescens Pf-5]
Length = 329
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/293 (18%), Positives = 119/293 (40%), Gaps = 7/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS---LL 81
G A +L+ + YT L ++ +E+ R+L +LP + ++ +L
Sbjct: 39 KGIALSVLASVLFAVMYFYTSLLAPLTGVEIFGWRMLLTLPCMTLFMLLAGEWHRVDEVL 98
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P L+ S+ ++ V F++A L S YF+ P+ V G + E
Sbjct: 99 RRVRSKPVLGPALLLSSALVGVQLWLFMWAPLNGHSLDVSQGYFLLPLTMVLTGRIVYGE 158
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ LQ +AA+L + + +L +A+ + Y RK + G +++M
Sbjct: 159 RLSRLQKLAAVLACIGVFNELYQVGSFSWATLVVALGYPLYFVLRKRLGTDHLGGLWVDM 218
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L AL+ V + + G++++ + + S G
Sbjct: 219 ALLMPVALWVVQSGEQGIAVVAAQPWLYL--LIPVLGVISASALVCYIIASRLLAFSLFG 276
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ Y P+L+++ +L + I + + + +A+++ +L V + +
Sbjct: 277 LLSYVEPVLLLLV-ALLLGESIKAGEWLTYVPIWLAVLLLVLEGVRHLLRQHR 328
>gi|86136605|ref|ZP_01055184.1| membrane protein, putative [Roseobacter sp. MED193]
gi|85827479|gb|EAQ47675.1| membrane protein, putative [Roseobacter sp. MED193]
Length = 312
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 92/300 (30%), Gaps = 4/300 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+++ ++G + IL + + L + V V +++ R + +
Sbjct: 1 MTQNTTLDRPLLGIALMLGFCILIPLGDAIAKLLAERVPVGQIVFIRFAAQALILVPVSL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI---YALLTRQGFLTSFSYFVTPV 129
L L + L +L + + ++ A+ V
Sbjct: 61 ALGQSLRLPRRLLPPVLLRTLLQMAGITAMFNALRYLPLADAVAIAFVMPFIMLLLGKYV 120
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ +G L + ++ ++ +++ AV K
Sbjct: 121 LGEEVGFRRLAACVVGFTGTLLVIQPSFAVVGLNALWPLAVAVIFAVFMLVTRKIAKDTS 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + LF++ G L L G L + + ++
Sbjct: 181 PIPLQAISGLIASVLMLPLFWIGSIGEITFLSPALPAQDSWNLLAMAGALGTIAHLLMTW 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ A ST+ M+Y + + I + +T+ ++ G+ V A + +L +
Sbjct: 241 SLRYAPASTLASMQYLEIPIATLVGWVIFNELPNTLASLGIGLTVAAGLYAILREHRAAK 300
>gi|109900176|ref|YP_663431.1| hypothetical protein Patl_3877 [Pseudoalteromonas atlantica T6c]
gi|109702457|gb|ABG42377.1| protein of unknown function DUF6, transmembrane [Pseudoalteromonas
atlantica T6c]
Length = 300
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 97/297 (32%), Gaps = 16/297 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +WG ++T+ + + +I+ R + + + + +
Sbjct: 6 FIELVLLASIWGAAFIFTRTATPEFGPISLITMRASIASLILLPFVC------NRVAIRQ 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L+ T A+ + F Y+LL S P+ +G ++LK+R+
Sbjct: 60 ITEHWRGILIVGLTNTAIPFCLFSYSLLHIGAGYASVMNATAPMFGAMIGWLWLKQRIPS 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFF 197
+ ++ L+ L + +++ ++I A Y + +
Sbjct: 120 VAVLGLLIGFLGVAVLSAAQAAAFDGISILPTLATLVATALYGYAGCFTKQHLSAVGPMA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L L + N + + L + + ++ I + S
Sbjct: 180 LAAGSLFAATLCLLPLNIWFMP-STLPSPSSWVDAIALGALCTALAYLMYFRLIAKVGPS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P I+ + +L + + + +V+ +++ K + K
Sbjct: 239 NALTVAYLIPAFGILWGIVLLNETLTPSMWVGVILVICGVLLVTGVASRVIAKRRLK 295
>gi|199597023|ref|ZP_03210456.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Lactobacillus rhamnosus HN001]
gi|199592156|gb|EDZ00230.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Lactobacillus rhamnosus HN001]
gi|259648930|dbj|BAI41092.1| putative transporter protein [Lactobacillus rhamnosus GG]
Length = 324
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/305 (11%), Positives = 88/305 (28%), Gaps = 10/305 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N + + G +F I WG + ++TQ L V L ++ R+ ++ +
Sbjct: 10 NQNDQKLKGVIFAVVGAIFWGASGIFTQMLFTDAGVQPLWLVGIRLFFAGL-LLVIWSSL 68
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L A+ +++F+ + + A+ + F+ PV +
Sbjct: 69 KDLRQLGTIWKNRHDAMLLILFAFLGMVPSQLTYFLAISAGNAATATILQFLGPVFILLY 128
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ + ++ L ++ ++ + LSLA A +
Sbjct: 129 VAFATRQMPRRIDFVSITLALIGTYLLVTRGRLTSLSLAPAAVFWGIMAGVSQALYTLLP 188
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY------GLLNSFVFCIFS 248
+ + ++ + L P + +
Sbjct: 189 RTLLAKYDARAVTGWSMLLGSLPFLPQYVLRRNPVLTLPNLGAIAFVVIFGTMLAYLLVL 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ G++ PL +V L + ++V+ ++ LP
Sbjct: 249 GSLHYISPVATGMLSAFEPLTATTLAVTRLHIAFGPAEWLGGFLIVLNTLLQALPFNKLQ 308
Query: 309 GKNKT 313
+
Sbjct: 309 HVQRR 313
>gi|37675935|ref|NP_936331.1| putative permease [Vibrio vulnificus YJ016]
gi|37200475|dbj|BAC96301.1| putative permease [Vibrio vulnificus YJ016]
Length = 295
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/290 (9%), Positives = 89/290 (30%), Gaps = 12/290 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A IL ++++ ++ + + R L + +
Sbjct: 11 LILATILSAFGWIFSKETIQGLPPFGFVGLRFLIASLCLLPFCY-------RSLFKASWG 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + ++ +F ++ ++ F+ V K+R +
Sbjct: 64 DVRSAALVGLLLATALMSWIHAISISDTLGEGAFILSLSMLMVPFVAWVLFKQRPKRIFW 123
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEGFFIEMCVLA 204
I+ + L ++L G + ++A F + + + L
Sbjct: 124 ISLPIAASGLAFLSLADGWQSSVSQLWFLFNAVVLALHFNINSKYSQTLPILVLTCIQLF 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + + + + F L + + + + K+ ++
Sbjct: 184 VTGVIGLSASLLFESVPTHIEPTIWAWFAASTILATALRYVMQTMAQKQINPGNAALIMI 243
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P+ ++ SV + + T + + G+++ ++++Y ++ K
Sbjct: 244 LEPVWTVILSVLWYSESLSTNKLVGCGLILFSLILYRTDGKLSLLVKSRK 293
>gi|83944538|ref|ZP_00956990.1| membrane protein, putative [Sulfitobacter sp. EE-36]
gi|83955359|ref|ZP_00964014.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83840352|gb|EAP79526.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83844644|gb|EAP82529.1| membrane protein, putative [Sulfitobacter sp. EE-36]
Length = 300
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 87/296 (29%), Gaps = 8/296 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+ G ++ + + + + + E R + L + AI
Sbjct: 2 TTAHPQRPVTGIFWMVVTGLCFICVTALVKHMGPRLPSSEAAFIRYGFGLVFLLPAIGAL 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + V + YA+ + ++ P+
Sbjct: 62 REAK-------LSRRQWALFSVRGGLHGVGVILWFYAMTRISIAEVTAMNYLAPIYVTIG 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++FL E L +IIA +L ++ I+ L A+ +A F +
Sbjct: 115 AALFLGESLALRRIIAVVLGLVGAAIILRPGFRELTGGHFAMLIAAVVFGGAYLLAKVLA 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V+A+ +LF ++ ++ + L + + A
Sbjct: 175 DEVRPSVVVAMMSLFVTLFLAPFALANWITPTWEEIGILAAVACFATAGHYTMTLAFAAA 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L+ + + + + +PID + +++ ++ + +
Sbjct: 235 PLTVTQPVTFLQLVWATALGAVVFAEPIDIWVVLGGAVILGSVTFITWREAMLKRQ 290
>gi|256822355|ref|YP_003146318.1| hypothetical protein Kkor_1131 [Kangiella koreensis DSM 16069]
gi|256795894|gb|ACV26550.1| protein of unknown function DUF6 transmembrane [Kangiella koreensis
DSM 16069]
Length = 290
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 90/286 (31%), Gaps = 9/286 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L A L + P+ +++E V + + R+ S+ G+ L +
Sbjct: 9 VLLAVLAVFLMAMVPVIIKYIE-VDPWLIGAFRLAVSVVGLVLLAGMTRKPL------IA 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + A HW + Y++ + + + LG K+ + L
Sbjct: 62 RRENWIFIFLLGLVFATHWLTYFYSIQLSTASIAAIGVSTFGAHLLLLGWFVHKQPPHWL 121
Query: 147 QIIAALLIILSLLIMT--LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ LL + ++ + I S + +A + E
Sbjct: 122 ELFCVLLAFAGVYMVVPEFDLNDGMTIGLILAVISGFLYALLPLMHQKYRHINGERRTFG 181
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ V+++ + + ++ + ++ ++ Y
Sbjct: 182 QFFVAMVIFSFGLPQAEWSIPKESWIGLIVLGVVCTLVAHSLWIKVSTELNHVVTSVVYY 241
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ S L + + + + + G+++ A V+ + I +
Sbjct: 242 LYVPIAMLFSFVFLDETLSSQQLVGAGLIIFANVLGIWFRSIRKHR 287
>gi|225859210|ref|YP_002740720.1| membrane protein [Streptococcus pneumoniae 70585]
gi|225720403|gb|ACO16257.1| membrane protein [Streptococcus pneumoniae 70585]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMILAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + I +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFIGMAMILFAVTLISLKDLFLEK 298
>gi|241203066|ref|YP_002974162.1| hypothetical protein Rleg_0312 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856956|gb|ACS54623.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 301
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 84/267 (31%), Gaps = 12/267 (4%)
Query: 40 TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
+P++ + L +V + RV +L + + ++ GML+
Sbjct: 32 SPIFVR-LSEVGPMATAFWRVALALIPIVIVSLL----KKERGPKPQSLSDYGMLILPGV 86
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
ILA+ + +L + + PV + VF R++ + +L + ++
Sbjct: 87 ILALDLAAWHLSLTMTSVANATLLANLAPVFVTLIAFVFFSARISRGFALGLVLALSGVV 146
Query: 160 IMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
I+ IA + A + I + A
Sbjct: 147 ILKGGPAAIGNGDLRGDGIAMIAAFFYACYILAIGRLRSRFDTLRIMLWSTTCAAACIFP 206
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
G ++ + ++ +Y + + + P++ +
Sbjct: 207 IGLIYEGHMLPATVYGWSIVFGLAFISHAGGQVAITYALAYLPPAFSSLTLLLQPVVAAI 266
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +L + I T++ + +V+ +++
Sbjct: 267 LAWALLNEAIGTMQALGGAVVLAGIMI 293
>gi|87122657|ref|ZP_01078533.1| possible transporter, EamA family protein [Marinomonas sp. MED121]
gi|86162035|gb|EAQ63324.1| possible transporter, EamA family protein [Marinomonas sp. MED121]
Length = 836
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 77/295 (26%), Gaps = 21/295 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + + WG + L+ + + + R ++ + G LS
Sbjct: 522 TQYIIGICCLLGTAMAWGGMFPVAKNALQSMDAVHISLIRYGFASLIFMAMLATKEGILS 581
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LL + +F + A L + + + P+IS + V
Sbjct: 582 LLPG----KHIFKLWMFGSFGFAGFSILAFAGLAYTKPQHGAIIMALMPLISAIMMWVLK 637
Query: 140 KERLNHLQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ +++ L +L ++++ I + ++ + + V
Sbjct: 638 NIKPAKFTLMSIALALLGVVLVITKGDINAFSGGSILPTLVILSGAFCWVTYTIGASYVS 697
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD------TLFLIGYGLLNSFVFC 245
+ AL + + L
Sbjct: 698 DFSVLRYTALSCFLGALTILFIAFVTNATGITQAPDLQQIFAVKWELLYLITFAGVIAVF 757
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++YGI + P+ I + + I++++
Sbjct: 758 SWNYGINTLGPINGILFINLVPITAFTIGSL-KGDLITQPEILGAT-ITISVLIM 810
Score = 42.6 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 17/149 (11%), Positives = 40/149 (26%)
Query: 160 IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
I I + L F + S + I + +L ++ G
Sbjct: 519 ISFTQYIIGICCLLGTAMAWGGMFPVAKNALQSMDAVHISLIRYGFASLIFMAMLATKEG 578
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
L + + + G+ K I+ PL+ + +
Sbjct: 579 ILSLLPGKHIFKLWMFGSFGFAGFSILAFAGLAYTKPQHGAIIMALMPLISAIMMWVLKN 638
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + ++ +V+ + IN+
Sbjct: 639 IKPAKFTLMSIALALLGVVLVITKGDINA 667
>gi|254253576|ref|ZP_04946893.1| hypothetical protein BDAG_02843 [Burkholderia dolosa AUO158]
gi|124898221|gb|EAY70064.1| hypothetical protein BDAG_02843 [Burkholderia dolosa AUO158]
Length = 307
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 74/281 (26%), Gaps = 6/281 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L+ + R L + + + + L + P +
Sbjct: 21 IWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLAINAASRAQLAAIRRRPALLVPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
V +LAV L + F V+ V L F + R+ ALL
Sbjct: 81 VALGALLAVSISLQQVGLQYTRIANAGFI-SSLYVVIVPLMGAFARHRIGAGTWFGALLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A + + +
Sbjct: 140 AIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHLARRHDPLVLAFLQFVVCGALC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+V + L G L + + + A + ++ +
Sbjct: 200 LVAGVAVEPIGIAMLRGALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V+ L + + + +++ ++ L ++ K
Sbjct: 260 AVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKK 300
>gi|260769851|ref|ZP_05878784.1| hypothetical protein VFA_002913 [Vibrio furnissii CIP 102972]
gi|260615189|gb|EEX40375.1| hypothetical protein VFA_002913 [Vibrio furnissii CIP 102972]
Length = 297
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 82/291 (28%), Gaps = 1/291 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +WG + L+ + +I RV ++ + +Y L +
Sbjct: 6 FLQLLGLAAIWGGSFLFLRLAAHSFGPAYLIEARVGFAALSLLLIGIYLKKSLPFRQHWR 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L + + T+ + + K +
Sbjct: 66 HFMILGLFNSALPFLLFAYAAQVLNVSTLSILNSTAPIWGAVIGYVWHKTPLSPKAIIGL 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L + + +I+ L + + L +A + +Y A S F
Sbjct: 126 LVGVLGVSVIVGLDRSLMGTETALPMIAATLAAFSYGIATNYTKNAPSISSFDNAHGSMW 185
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A +V+ + + L + ++ +K S + +
Sbjct: 186 AASLWVLPLLPLMPMRAVPSGVEMLSVVALGILCTGLAYLLYFRLVKDIGPSPTLSVTFL 245
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P I+ +L + I + +V++ ++ + + + + +
Sbjct: 246 IPGFGILWGYLVLGETIGLNTLLGTALVLVGTMMVTGFSPLALLRARQPAA 296
>gi|254462733|ref|ZP_05076149.1| membrane protein [Rhodobacterales bacterium HTCC2083]
gi|206679322|gb|EDZ43809.1| membrane protein [Rhodobacteraceae bacterium HTCC2083]
Length = 307
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 94/300 (31%), Gaps = 5/300 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + +L+ + + E V + + R ++LP + +++ +
Sbjct: 1 MSSFTGIALKLASVVLFVVMSALIKATTEDVPTGQAMFFRSFFALPVILGWLMWRHDLRT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ + L+ + L + ++ LG
Sbjct: 61 GLRTSRPMGHVWRGLIGVCGMGFGFSSLAYLPLPDVTAIGFAAPLMTVIFAALILGERLR 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPL----LSLAIAVTWSAYCFARKTIPVGSSEG 195
R++ + + ++++ +++ SG + I V SA A I +
Sbjct: 121 VYRMSAVLLGLVGVVVILAPRLSISSGGAMESSAQIGVILVLASAMFRALAQIHIRRLAQ 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ ++ + + + + + + LI GL+ + + A
Sbjct: 181 TEQTAAIVFYFSMTTTLLSLLTLPFGWTMPDAGAIAMLICAGLIGGVAQIFITSAYRFAD 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ + +Y + L ++ + IV+++ ++ + K +
Sbjct: 241 AAVIAPFDYASILFAMIIGYVFFADVPTPQMLLGSAIVILSGLLIIWRERALGLKRGKAR 300
>gi|187736053|ref|YP_001878165.1| protein of unknown function DUF6 transmembrane [Akkermansia
muciniphila ATCC BAA-835]
gi|187426105|gb|ACD05384.1| protein of unknown function DUF6 transmembrane [Akkermansia
muciniphila ATCC BAA-835]
Length = 305
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 96/307 (31%), Gaps = 23/307 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G + + A ++WG+ ++ + +VS + + R+L + + A +
Sbjct: 1 MPSEALKGHIAMGAAAVIWGLMSPVSKLVMQQGEVSSASLATFRLLGAALLFWLASAFVP 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +K + + S + + F + + +TPV+++ L
Sbjct: 61 R------EPIKRKHRLPLFYASLFGIIFNQMAFTVGVGFTSPADAAIITTITPVLTMILA 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------------LLSLAIAVTWSAY 181
+ L+E + +II + +++ SG L + +
Sbjct: 115 AFVLREMVTGKKIIGVCASAIGAMLLVSGSGAHAAALPGDNNLLGDILCLASQCSVAVYF 174
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
F + I S M A A + + L L
Sbjct: 175 VFFKNLIGRYSPVTLLKWMFTYAAAACLPFTFREVGSIHYSALPVQTWLGIAYVVALATF 234
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ S+ +R K + V + Y P++ +V ++ + +V +++
Sbjct: 235 VSYICLSFAQQRLKPTAVSMYNYCQPVIASSVAVMWGMDHFGWMKVLSVLLVFTGVLLVT 294
Query: 302 LPTVINS 308
+
Sbjct: 295 GTRGKRA 301
>gi|302757575|ref|XP_002962211.1| hypothetical protein SELMODRAFT_227288 [Selaginella moellendorffii]
gi|300170870|gb|EFJ37471.1| hypothetical protein SELMODRAFT_227288 [Selaginella moellendorffii]
Length = 455
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/294 (8%), Positives = 72/294 (24%), Gaps = 21/294 (7%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + WG + + L + V S R++ + +
Sbjct: 151 LLLISPFFFWGTAMVAMKGVLPKAGPYFVASTRLVPAGLLLVGFASLRGRKQPSGLYAWL 210
Query: 87 NPKAVGMLVFSATILAVH---------------WGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ ++ S + + + + +
Sbjct: 211 SILIFSIVDASCFQGFLAAGLGKTSAGLGSVIIDSQPLTVAILASILFNETIKPLGVLGL 270
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ + L + + A L + + + +A A
Sbjct: 271 LLGVAGLLLLEVPAESLGALLSSGGGIEFSSSFWSSGEWYMLLAAQSMALGTLLVRWVCK 330
Query: 192 SSEGFFIEMCVLAIPALFYVVW-----NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
S+ + I L ++ G L ++ + +
Sbjct: 331 FSDPIMATGWHMIIGGLPLLLLAASNNEPALNGHLEDLMVSDWASLAYTSIFGSAISYGV 390
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F Y + L+ + + + P+ +L + ++ + + I + + +
Sbjct: 391 FFYNATKGSLTKLSSLTFLTPMFAAFFGYLVLDESLNGAQILGATITLAGIYLV 444
>gi|284105824|ref|ZP_06386228.1| conserved hypothetical protein, membrane [Candidatus Poribacteria
sp. WGA-A3]
gi|283830111|gb|EFC34377.1| conserved hypothetical protein, membrane [Candidatus Poribacteria
sp. WGA-A3]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 90/292 (30%), Gaps = 19/292 (6%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++WG + + + L S +EV R L +L + T
Sbjct: 10 YAALITASVVWGGSVVAQKVALGAFSAVEVSVFRGLGALGILVPL-----WWWQEQSKTR 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +G+L + + +Y L +P I+ FL S+ L++
Sbjct: 65 LTVRDLGVLTALGLAVLGNHLLILYGLQHIGAGAAGVIIGASPAITAFLSSLMLRDIPFR 124
Query: 146 LQIIAALLIILSLLIM-------------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + + + ++ L G+ +L+L ++
Sbjct: 125 QVWVGCAVSFMGVALVSGGNVTADGGANPVLGGGLVVLALVSWALYTIGSRWMMEGLSPL 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + + + + + + YG+
Sbjct: 185 TVNWTTLFISIVLQVPLLWLDPLVLEAGIGSIPPSGWAALVYVIVFATALGQQAWLYGVS 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S G+ P+ +V S +L + +D ++ + G V+ + + +
Sbjct: 245 GIGPSRAGVFTNLIPVSALVLSFVVLGESLDLIKVLGIGFVLGGVWLVNRSS 296
>gi|254475051|ref|ZP_05088437.1| possible transporter, RhaT family, DMT superfamily [Ruegeria sp.
R11]
gi|214029294|gb|EEB70129.1| possible transporter, RhaT family, DMT superfamily [Ruegeria sp.
R11]
Length = 288
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 94/292 (32%), Gaps = 9/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ G+L + A + + ++ + + + V +++ + S L
Sbjct: 1 MDTLRGSLLMVLAMAAFALEDMFIKSAAQSLPVGQILILFGAGGMVIFALMARAQSEPLW 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + A+ S TP++ VF
Sbjct: 61 NPVFCTRALLLRSVAEVAGRLCFT------LAIALTPLSSASAILQATPLVVSAGAVVFF 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-AVTWSAYCFARKTIPVGSSEGFFI 198
KE + + IA + +L++ ++ AV + R + +G
Sbjct: 115 KEHVGLRRWIAIAAGFVGVLMILRPGASGFELASLFAVAGTLGFAGRDLATRAAPKGLSN 174
Query: 199 EMCVLAIP-ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
LA L G L ++ ++ L+ L+ + + ++ ++S
Sbjct: 175 AHLGLAGFAMLIVAGAVALPFGGPVALPDLSTSVDLVAATLVGVVAYHALTGAMRLGEIS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
V YT + ++ V + + D ++VI+ LL + +
Sbjct: 235 VVAPFRYTRLIFAMILGVVVFNESPDAWTLAGSAVIVISGAFTLLRSNRTAR 286
>gi|332140668|ref|YP_004426406.1| hypothetical protein MADE_1006330 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550690|gb|AEA97408.1| hypothetical protein MADE_1006330 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 309
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 96/288 (33%), Gaps = 12/288 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + A + G+ + LE V + ++ R L SLP + ++ L +L
Sbjct: 13 KGIKMLLVAVLCLGLNWPGMKLGLEIVGPVWMVCLRFLLSLPVLALFVLITKKRLPVLNR 72
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ V + + +L S + TP+ + + +++ ++R
Sbjct: 73 KDRSVVFVVAFFQFILSMGL----ITVSLQYIPAGTASILIYTTPLWMLLIDTLWYRQRP 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGF 196
++I + + ++ SG P L + A+ A GS
Sbjct: 129 PSKRLILTGISTIGCAMILFASGQPGAWLPLFGMLLASALWAVAIRRVSFHKWKGSVIEA 188
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+A A+ + L + F + +
Sbjct: 189 VFWQFTIAGFAMLAIALMVEPTPNFGAYDISDWLLLAYIGPVATGLGFGLMVAAGPKLPP 248
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ P++ VSSV +LK+ + + +++ A++V LP
Sbjct: 249 DKIVLISTLTPIVGYVSSVLLLKETLLPMVVAGAILMIAALIVNGLPQ 296
>gi|331649484|ref|ZP_08350570.1| putative permease transporter [Escherichia coli M605]
gi|315296950|gb|EFU56230.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 16-3]
gi|324008092|gb|EGB77311.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 57-2]
gi|331041982|gb|EGI14126.1| putative permease transporter [Escherichia coli M605]
Length = 325
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 21 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 78
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 79 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 138
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 139 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 198
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 199 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 258
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 259 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 317
>gi|262194705|ref|YP_003265914.1| hypothetical protein Hoch_1468 [Haliangium ochraceum DSM 14365]
gi|262078052|gb|ACY14021.1| protein of unknown function DUF6 transmembrane [Haliangium
ochraceum DSM 14365]
Length = 303
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/285 (10%), Positives = 75/285 (26%), Gaps = 14/285 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +WG + ++ + L + + RVL + + + L
Sbjct: 25 IIRLLALAAIWGGSFIFMKVLAPAIGAVRTADLRVLIAGILLVIYLRARGRDLEF----- 79
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
LV + + + YA L + P +++L +R
Sbjct: 80 -RRFWRQYLVIGVVNSGIPFLCYTYAALHIPASYSVILNATAPAFGAIFAAIWLADRFTI 138
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + LL + +M+ +P + T S
Sbjct: 139 WRFLGLLLGACGVALMSWRGPVPFTFEVTAAIAACLVATTCYGLAGVYMKKRASGAAAAS 198
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ A + L L + ++ + ++ I +
Sbjct: 199 IAACSQLVAGLLLFPATLFTPLETPLTPFLVANILALAVVCSALAYLLYYRLIVDIGPAK 258
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + P+ ++ L + I G+++ V
Sbjct: 259 ALTVTFLMPVFGMLWGFLFLDEEITLAMLAGVGLILSGTFVVARR 303
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 23/77 (29%)
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+L+ + + F ++Y S I+ TAP + + L R
Sbjct: 82 FWRQYLVIGVVNSGIPFLCYTYAALHIPASYSVILNATAPAFGAIFAAIWLADRFTIWRF 141
Query: 288 IVFGIVVIAMVVYLLPT 304
+ + + +
Sbjct: 142 LGLLLGACGVALMSWRG 158
>gi|169826338|ref|YP_001696496.1| putative transport protein [Lysinibacillus sphaericus C3-41]
gi|168990826|gb|ACA38366.1| Hypothetical transport protein [Lysinibacillus sphaericus C3-41]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 88/287 (30%), Gaps = 13/287 (4%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ I+WG + T LE ++ +V++ R L + + + +
Sbjct: 9 MLLVTAIVWGSGFVITAIALEYLTAYQVMAGRFLLASIILTVLF--------GSRLKKAS 60
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ TIL + + L +F V VI + K R++ +
Sbjct: 61 RSVIWKGALLGTILYIAFALQTVGLQYTTPSKNAFLTAVNVVIVPLIAYAVYKRRIDGYE 120
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
II +L+ I+ + ++L + + A FA + + I
Sbjct: 121 IIGSLMAIVGIGFLSLQGSLTMNMGDALSLACAVAFAFDIFCTNLFVQKEDAIALTIIQF 180
Query: 208 LFYVVWNGFSGGEHFFLGNI----PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + + + + + + I+
Sbjct: 181 LTASFIGILVVISQGEIPTSLEKEAIYSIIYLGIFSTTIAYLFQNVANQYTTATKAAIIL 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T ++ SV L + + + + ++++A+++ + K
Sbjct: 241 STESFFGMILSVIFLHEILTSRMVVGAVLILLAILIAEIKPAHPKKK 287
>gi|322831947|ref|YP_004211974.1| hypothetical protein Rahaq_1224 [Rahnella sp. Y9602]
gi|321167148|gb|ADW72847.1| protein of unknown function DUF6 transmembrane [Rahnella sp. Y9602]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 95/298 (31%), Gaps = 13/298 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + + ++ + + +R L +L + ++ L +
Sbjct: 3 VLFPLLAVLIWSLNAVVSKASASAIDPAAISFYRWLLALLTLTPFVL----PGMLRNLQV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ + ++ YA + + P+++V +G L
Sbjct: 59 VKQYGWKLLILGLLGMVLYQSLAYYAAHSVSALFMGILNSLIPLLTVLIGLFVLSVVPTV 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ +++ + L+ + GI L + ++Y +
Sbjct: 119 GVALGSIISLGGLVWLVSAGDPAQLLQHGIGTGELMMFAASASYALYGVLTKRWAIPLPN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F + L L L + ++ G+ R +
Sbjct: 179 WQSLYVQIIFGVLLLLPNFLLAKDVSLTAHNIPLVLFAGIPASIIAPFLWIQGVIRLGAN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I +P+ V +V L + + + I GI + +++ ++ + K
Sbjct: 239 KASIFMNLSPIFTAVIAVLFLHEQLHSYHLIGGGITLAGVILAQRLRKPLFTRSASAK 296
>gi|145633735|ref|ZP_01789460.1| triosephosphate isomerase [Haemophilus influenzae 3655]
gi|145635535|ref|ZP_01791234.1| triosephosphate isomerase [Haemophilus influenzae PittAA]
gi|144985394|gb|EDJ92221.1| triosephosphate isomerase [Haemophilus influenzae 3655]
gi|145267198|gb|EDK07203.1| triosephosphate isomerase [Haemophilus influenzae PittAA]
Length = 292
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/289 (20%), Positives = 123/289 (42%), Gaps = 8/289 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A L+G ++ L+ ++ ++ +R++++ P V ++ F + L
Sbjct: 3 KGILVSLLASFLFGYMYYFSTLLKPLNGTDIFGYRMIFTFPFVLLSVTLFKQKAALIERL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K K P + ++ F++A SF Y + P++ V G VF KE
Sbjct: 63 KRIQKRPHLALSYLLCGLLMGFQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRVFFKE 122
Query: 142 RLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R++ + IA ++ L ++ + L G+ ++ I + ++AY RK + F +EM
Sbjct: 123 RISTFKFIAVIIATLGVISNIVLKGGLSWEAIVICLGYTAYFSIRKALKNTDLASFCLEM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++++ + N L+ GL++ + ++ +G
Sbjct: 183 LSLMPVSIYFA---LQTDFATVQQTNPFIWGLLVLLGLISGTALIAYVIASNMLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ Y ++M+ S I + ID+ +F +VIAM++ ++ V
Sbjct: 240 LLGYVETIMMLCVSFLI-GEQIDSESYPLFICLVIAMILVMVDGVYKQH 287
>gi|161521428|ref|YP_001584855.1| hypothetical protein Bmul_4892 [Burkholderia multivorans ATCC
17616]
gi|189352404|ref|YP_001948031.1| drug/metabolite transporter (DMT) superfamily permease
[Burkholderia multivorans ATCC 17616]
gi|160345478|gb|ABX18563.1| protein of unknown function DUF6 transmembrane [Burkholderia
multivorans ATCC 17616]
gi|189336426|dbj|BAG45495.1| drug/metabolite transporter (DMT) superfamily permease
[Burkholderia multivorans ATCC 17616]
Length = 307
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 76/281 (27%), Gaps = 6/281 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L+ + R L + + + + + L ++P +
Sbjct: 21 IWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLNFNAASRAQLAAIRRDPALLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
V +LAV L + F V+ V L VF + R+ ALL
Sbjct: 81 VALGALLAVSISLQQIGLQYTRIANAGFI-SSLYVVIVPLMGVFARHRIGVGTWFGALLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A + + +
Sbjct: 140 AIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHLAKRHDPLVLAFLQFVVCGALC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ + L G L + + + A + ++ +
Sbjct: 200 LAVGIAVEPVSVAMLRGALPTVLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V+ L + + + +++ ++ L ++ K
Sbjct: 260 AVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKK 300
>gi|126463298|ref|YP_001044412.1| hypothetical protein Rsph17029_2538 [Rhodobacter sphaeroides ATCC
17029]
gi|221640349|ref|YP_002526611.1| hypothetical protein RSKD131_2250 [Rhodobacter sphaeroides KD131]
gi|126104962|gb|ABN77640.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17029]
gi|221161130|gb|ACM02110.1| Hypothetical Protein RSKD131_2250 [Rhodobacter sphaeroides KD131]
Length = 294
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 83/297 (27%), Gaps = 5/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T +G + ++ + ++ L E SVL V+ R + V +GG
Sbjct: 2 TEQNTRLGIGLMVLTTCIFALQDGISRHLAEHYSVLMVVMIRYWFFAAFVIAVAARQAGG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + V +LA + + + + P++ L
Sbjct: 62 L----APAIRSRFPVLQVLRGLLLAAEVCVMVVGFVKLGLVASHAVFICYPLLVAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E + + +A + +LI+ A+ +A FA +
Sbjct: 118 VLGETVGWRRWLAIGAGFVGILIILQPGLAVFSPWALVPLAAATLFATYALLTRYVARGD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V G H+ D ++ + + A+ S
Sbjct: 178 SAAVSFFWTGTVGAVAMTAVGLWHWEPMAPGDWFWMAALCCTAALGHWCLIRAYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V Y + F+ + + +VV A + L + + K
Sbjct: 238 AVQPFAYLQLPFAAMLGFFVFDERPGWNVVLGACVVVSAGLFTLWREQVRARARAGK 294
>gi|260683138|ref|YP_003214423.1| hypothetical protein CD196_1395 [Clostridium difficile CD196]
gi|260686736|ref|YP_003217869.1| hypothetical protein CDR20291_1372 [Clostridium difficile R20291]
gi|260209301|emb|CBA62681.1| putative membrane protein [Clostridium difficile CD196]
gi|260212752|emb|CBE03879.1| putative membrane protein [Clostridium difficile R20291]
Length = 322
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 15/307 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV 72
KE A L G + + I+WG + TQF ++ L++I+ R + +
Sbjct: 13 KKEGALLKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFF 72
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + L + + L+ +F VI
Sbjct: 73 -------KQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVP 125
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTI 188
F+G + + +L+ + II++L+ ++ + I++L + + I A+ +
Sbjct: 126 FIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSE 185
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L VV F+G + + F +
Sbjct: 186 FAKDNNPMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQT 245
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
KR + I+ T + + S+ ILK+ I I ++ + + T ++
Sbjct: 246 ICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLIIGSILIF--VAIITAETKLSF 303
Query: 309 GKNKTKK 315
K+K K
Sbjct: 304 LKSKKVK 310
>gi|254455407|ref|ZP_05068836.1| drug/metabolite transporter [Candidatus Pelagibacter sp. HTCC7211]
gi|207082409|gb|EDZ59835.1| drug/metabolite transporter [Candidatus Pelagibacter sp. HTCC7211]
Length = 273
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 88/271 (32%), Gaps = 6/271 (2%)
Query: 40 TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
L ++ E + +V+ R + + FF + K +G+
Sbjct: 1 MDLIVKWSEHYPLGQVLFFRGFFGVIIYFFIM------PRERIKNFYQTKRIGLHFLRCL 54
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
+ AL F P+ + FL E++ + +A L+ + ++
Sbjct: 55 FGLIALIAIFIALRNLPLATVVSISFAAPIFTTIFSIFFLSEKVGFYRWLAVLIGFIGII 114
Query: 160 IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
++T L I + I + + + + + F+
Sbjct: 115 VITEPGFDSLNIYYIYPIIFCLGLSYVAIAIRQLSTTEPVWLISLYFSAAITLASLFTVP 174
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
+ + NI D + L G L F K +++S V ++Y A + I+ FI
Sbjct: 175 FGWVMPNIKDLILLCMIGFLGGFANLWLGQSFKLSEVSLVSPLKYLALVFGIIFGYFIWD 234
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + +VV + ++ L + K
Sbjct: 235 EVPTIKTLLGAMLVVFSSLIILRREIHYKEK 265
>gi|167033242|ref|YP_001668473.1| hypothetical protein PputGB1_2236 [Pseudomonas putida GB-1]
gi|166859730|gb|ABY98137.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
GB-1]
Length = 319
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 81/284 (28%), Gaps = 12/284 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L+ A + + ++ + ++ IS + + L
Sbjct: 15 GALYAVLAALGFSFKAIFVKLAYAAGPVDAISLLAMRMGLSLPLFAWLVWASRGQGSAPL 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + F Y L L F P + + ++ L+ER +
Sbjct: 75 NLGDGLRVALLGLFGYYLASLFDFYGLQYISAGLERLILFTYPTLVLVFQAIALRERPSL 134
Query: 146 LQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ A L L L I +H G + + Y + S
Sbjct: 135 RTLSAMGLCYLGLGIAFVHDISVAGVGQQVVLGSLWVFASAVTYALYYAGTGMMLKRMGS 194
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + G+ + L + + + I+R
Sbjct: 195 MRLAGLCGTASSLMVLAHYLMVAPVGQLWQLPSAVWVNAGLMAVFSTVLPIYWVALAIQR 254
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + P+L +++S IL + I + + +V+ A+
Sbjct: 255 LGPTHTAAVGNLGPVLTVLASWAILNEEISLYQVVGLAVVLFAV 298
>gi|189425701|ref|YP_001952878.1| hypothetical protein Glov_2645 [Geobacter lovleyi SZ]
gi|189421960|gb|ACD96358.1| protein of unknown function DUF6 transmembrane [Geobacter lovleyi
SZ]
Length = 309
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 91/298 (30%), Gaps = 17/298 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFS 75
++ + L + + ++W + ++ + + + ++ R + +L + ++
Sbjct: 8 KSHVHRPLFAYLLLTLSALIWSGNFVISRAVASLIPPVGLLFWRWVVALAVLCPIVLPRL 67
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L +F + + A+ T + P++ +
Sbjct: 68 KNQWPLIRANLKI----FPLFGLFGVTLFNLLIYLAMHTTTAINAALVNSAIPILIILFT 123
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCF 183
+F ++ ++ Q + LL + + I+ L G L+ A +
Sbjct: 124 RIFFRKGVSARQWVGILLSLGGVCIIILRGNPATIAHLTFSAGDLLVLGAATSWAAYSVC 183
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
R F + + + + G + L +
Sbjct: 184 LRYYPEGLDPLVFLFCIALCGQLFILPLYLLEVINGATVPVTAASLASIGYVGVLASVVA 243
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F ++ GI+ G + P+ + +V LK+ + + ++V+ ++
Sbjct: 244 FVAWNSGIRSVGAQVGGQFIHLMPVFSTILAVLFLKEHLQGYHLLGILLIVVGIIFAT 301
>gi|299536062|ref|ZP_07049379.1| putative transport protein [Lysinibacillus fusiformis ZC1]
gi|298728486|gb|EFI69044.1| putative transport protein [Lysinibacillus fusiformis ZC1]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 87/287 (30%), Gaps = 13/287 (4%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ I+WG + T LE ++ +V++ R L + + +
Sbjct: 9 MLLVTAIVWGSGFVVTAIALEYLTAYQVMAGRFLLASIILTVLFGARLKK--------AS 60
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ TIL + + L +F V +I + K R++ +
Sbjct: 61 KSVIWKGALLGTILYIAFALQTVGLQYTTPSKNAFLTAVNVIIVPLIAYAVYKRRIDGYE 120
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
II +++ I+ + ++L + + A FA + + I
Sbjct: 121 IIGSIMAIVGIGFLSLQGSLTMNIGDALSLACAVAFAFDIFCTNLFVQKEDAIALTIIQF 180
Query: 208 LFYVVWNGFSGGEHFFLGNI----PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + + + + + + I+
Sbjct: 181 LTASFIGVLVVISQGEIPTSLEKEAIYSLVYLGIFSTTIAYLFQNVANQYTTATKAAIIL 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T +V SV L + + + + ++++A+++ + K
Sbjct: 241 STESFFGMVLSVIFLHEMLTSRMVVGAVLILLAILIAEVKPAHPKKK 287
>gi|294675042|ref|YP_003575658.1| hypothetical protein PRU_2405 [Prevotella ruminicola 23]
gi|294472948|gb|ADE82337.1| putative membrane protein [Prevotella ruminicola 23]
Length = 291
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/287 (8%), Positives = 83/287 (28%), Gaps = 3/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G + + + +L G T L+ + + ++ ++++ +R+L++ + G
Sbjct: 2 NETQRGFIQLHLSVLLAGFTGLFGRLIT-LNEVDIVWYRMLFTSAILLVFTGLPRVGWRK 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+G+ I + + + + +
Sbjct: 61 FLQLCGCGALLGLHWILFYSSIKASNVSIGVICFSLVGFFTALFEPLIYHRKLSVTELVF 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L ++ + + A+ + +
Sbjct: 121 SLITVLGVLCIFSLDARYRYGIGIGVVSSAVCALYAICNKKASVGVRSRTVLMYQMSGGI 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++++ Y+ + + L L ++ + +KR TV
Sbjct: 181 VLVSMIIPIYLAFFPSNQPVVVIPDGTNLWLMLCHALFCTVGMYLLQIQALKRLSAFTVN 240
Query: 261 IMEYTAPLLMIVSSVFILKQ--PIDTVRTIVFGIVVIAMVVYLLPTV 305
+ P I+ + I + I+ I ++++++++ +
Sbjct: 241 LTYNLEPCYTIILAFLIFGEGREINFSFYIGIALILLSVLLQTRRAL 287
>gi|259418685|ref|ZP_05742602.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259344907|gb|EEW56761.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 308
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/262 (14%), Positives = 87/262 (33%), Gaps = 8/262 (3%)
Query: 49 QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFF 108
+ L++ R +++ G+ A+V + + G+ + +T
Sbjct: 41 PLHALQISQGRFVFAFIGISAAVVILRQKI--------HKPDWGLHIGRSTFGWGGVTLM 92
Query: 109 IYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP 168
++ + F+ PVI + L FL E++ + +AA + + +I+ +
Sbjct: 93 FASVAFIPLADATAISFLNPVIGMMLAIPFLGEKVGPWRWLAAAIALAGAMILLRPTPES 152
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
A+ +A + I + G + +L + L +V + + +
Sbjct: 153 FQPAALLALGAALAMGAELIFIKKLAGGEPPVQILWVNNLIGMVIASCAALVVWQMPTAA 212
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L G L + F + RA S V Y + + I D V +
Sbjct: 213 QWGALAALGALMACAQACFVNAMARADASFVAPFAYGTLVFAAIYDAVIFGVVPDWVTIL 272
Query: 289 VFGIVVIAMVVYLLPTVINSGK 310
I++ + +N +
Sbjct: 273 GASIILSGAGLLAWRESVNGKR 294
>gi|229101588|ref|ZP_04232311.1| Transporter, EamA [Bacillus cereus Rock3-28]
gi|228681830|gb|EEL35984.1| Transporter, EamA [Bacillus cereus Rock3-28]
Length = 320
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 92/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKILPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMTLSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GIILLLPFNIGNFTVSNINTSFITSLLYTGIISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFLFLGEELSWIQILGTIVVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKILPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMTLSFFGVILVLLKG 157
>gi|254511803|ref|ZP_05123870.1| permease, DMT superfamily [Rhodobacteraceae bacterium KLH11]
gi|221535514|gb|EEE38502.1| permease, DMT superfamily [Rhodobacteraceae bacterium KLH11]
Length = 301
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 93/284 (32%), Gaps = 9/284 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A + + + L E++ +R L + V +
Sbjct: 13 LWMTGAIASFSAMAIAGRELSVTHDTFEIMFYRSLVGICIVALILTATRKW------HQV 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + + YA+ F P+ + L +FL ERL L
Sbjct: 67 TTQRLDLHGIRNVMHFIGQNLWFYAVSVIPLAQVFALEFTNPIWVILLSPLFLGERLTAL 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ +AL+ + +LI+ L IA SA FA TI S C++
Sbjct: 127 RLTSALIGFVGILIVARPGAAALDPGVIAAAASAVFFALATISTKSLTRITSIGCIMFWL 186
Query: 207 ALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ G L + L+ G+ + + A + V ++
Sbjct: 187 TFMQAGLGLVASGIDGQITLPTLATAQLLLLVGVAGLLAHYCITNALAIAPATVVVPFDF 246
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P+D + ++ + + + N+
Sbjct: 247 ARLPTIAIVGMILYHEPLDQWTLLGAVVIFTGIFLNVWSENRNN 290
>gi|167584226|ref|ZP_02376614.1| hypothetical protein BuboB_02754 [Burkholderia ubonensis Bu]
Length = 307
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 86/290 (29%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L++ A G T + ++ + + R L + P +F +
Sbjct: 2 KTRLIGYLYLAAAMTGVGSTVIASRLAAGGLPPFTATALRFLIATPLLFALMRAQRLRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L A ++V +A + I P +S + +V L
Sbjct: 62 RL----SRRDAGLLVVQAAAGGVGYTVLLICGTRLSSPLDAGVMLGTLPAMSTLIAAVLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPV 190
+ER AA L +L++T G S+ AV A
Sbjct: 118 RERQTPRDWAAAALATAGVLLVTFTPGHAAPSMRALAGDALVLAAVACEAVFILLNRRLA 177
Query: 191 GSSEGFFIEMCV-LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + AL V + + + + +
Sbjct: 178 VPLAPLTLSTAMSGLGFALALVPAAFEWHAATAGWASGAIAAVVYYALVPTVLGYLCWYA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + + AP+ ++ +V + + ++ R +VV ++V
Sbjct: 238 GSARTSGTEAALFTAFAPVSAVLFAVTLFGETLNAARLAGIALVVAGVLV 287
>gi|163734851|ref|ZP_02142289.1| hypothetical protein RLO149_15523 [Roseobacter litoralis Och 149]
gi|161391956|gb|EDQ16287.1| hypothetical protein RLO149_15523 [Roseobacter litoralis Och 149]
Length = 317
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/302 (12%), Positives = 94/302 (31%), Gaps = 18/302 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + A +L + + + + + ++ + V R+L + L
Sbjct: 21 GMICMIVAMLLLPVGDTFAKLISETLNPVGVTLCRILAQALFLVPVAYLLRHRLRGA--- 77
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
++ S +L V I A +FV P+I L + L E
Sbjct: 78 ----MFSPVVALSGVLLIVSLTSLISAFAVMPITTALAIFFVEPLILTILAAFLLGETAG 133
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-------- 196
++ A + ++ +I+ + SA +A I + +
Sbjct: 134 PRRLAAVGVGLIGAMIVIRPGFDVYGWATLLPLISASAYALNMIVLKKATVTRSGLTVQC 193
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L + L + + L ++ G++ + F + + + A
Sbjct: 194 GTTIYAGLGLILLSAGLGATGMTAFVPAASDTATWLLILCAGVVAATSFVLIAEAYRSAD 253
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYLLPTVINSGKNKTK 314
+ + +Y + + DT+ I I++ + ++ ++ + K
Sbjct: 254 ATALAPFQYLEIVTATALGFLVFGDFPDTLTWIGVAIILGSGIYIFHREGQSDTAAPRRK 313
Query: 315 KS 316
++
Sbjct: 314 RA 315
>gi|153011206|ref|YP_001372420.1| hypothetical protein Oant_3886 [Ochrobactrum anthropi ATCC 49188]
gi|151563094|gb|ABS16591.1| protein of unknown function DUF6 transmembrane [Ochrobactrum
anthropi ATCC 49188]
Length = 299
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 91/292 (31%), Gaps = 10/292 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + + I G +P++ + L +V L R+ L + ++
Sbjct: 7 ANPAPTNAQRLAMTALIVGGIAIGSSPIFVR-LSEVGPLATGFWRLA--LAVLPLLLMDG 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
T L +A G + +L + + P+
Sbjct: 64 RERRDEKDTTPLTLSDCLRLALPGLFIAFDLGAWHLSLHMTSVANATLLANMAPIFVTLG 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKT 187
+ R++ +I + ++ ++++ G L +A + A
Sbjct: 124 AWLLFNSRVSTSFMIGLAVAVIGVVVLKGGPGELLQSQSSGDAMALLAAVFYAGYILSVG 183
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I + AI A+F + F G+ + + ++ +
Sbjct: 184 RLRSRFSTMRIMLWSSAIAAVFSLPVAYFMEGQILPATLYGWLILAGLAWVTHAAGQSMI 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+Y + S + P++ + IL +PI ++ + IV+ +++
Sbjct: 244 AYALAYLPASFSSLTLLLQPVVAAFLAWTILSEPIGMLQALGGIIVISGILI 295
>gi|116250192|ref|YP_766030.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254840|emb|CAK05914.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 321
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 78/283 (27%), Gaps = 5/283 (1%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + + +E + + +I+ R L + + + + L + T + L
Sbjct: 39 WGSSYSFIKIGVETIPPITLIAARTLIAGGILLAVLHHRRVRLPRDRATWRRFFVQACLN 98
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ W ++ F + + + R + I
Sbjct: 99 SVVPFTLIAWAEQSVDAGLAVILNSATPIFTFLLAVLITHHEQVTLRRLFGVMAGLAGIC 158
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV----LAIPALFYV 211
L + + L L+ +A+ + C+A I + +G + ++ +
Sbjct: 159 LVIGVEALSGLGENLTAQLAIILATICYAGAAIFSKNFKGLDPAVPAAGSLISGAVILLP 218
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
L + F I+ ++ Y + +
Sbjct: 219 TSLVVDRPWELDPSAASMLALLALSAFSTALAFVIYFRLVQTLGSVGTTAQAYLRVPIGV 278
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ L + + I V+ + +P + + +
Sbjct: 279 AIGIVFLGERLSPTAWIGLICVISGVAAMTIPARRGATQARNA 321
>gi|26250402|ref|NP_756442.1| putative transport protein YicL [Escherichia coli CFT073]
gi|91213186|ref|YP_543172.1| transport protein YicL [Escherichia coli UTI89]
gi|117625940|ref|YP_859263.1| putative inner membrane protein [Escherichia coli APEC O1]
gi|191170368|ref|ZP_03031921.1| carboxylate/amino acid/amine transporter [Escherichia coli F11]
gi|227883881|ref|ZP_04001686.1| DMT superfamily drug/metabolite transporter [Escherichia coli
83972]
gi|237703463|ref|ZP_04533944.1| transporter YicL [Escherichia sp. 3_2_53FAA]
gi|300984855|ref|ZP_07177143.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 45-1]
gi|300988778|ref|ZP_07178820.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
200-1]
gi|301047474|ref|ZP_07194551.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
185-1]
gi|26110832|gb|AAN83016.1|AE016769_131 Hypothetical transport protein yicL [Escherichia coli CFT073]
gi|57545674|gb|AAW51765.1| YicL [Escherichia coli]
gi|91074760|gb|ABE09641.1| hypothetical transport protein YicL [Escherichia coli UTI89]
gi|115515064|gb|ABJ03139.1| putative inner membrane protein [Escherichia coli APEC O1]
gi|190909176|gb|EDV68762.1| carboxylate/amino acid/amine transporter [Escherichia coli F11]
gi|226902727|gb|EEH88986.1| transporter YicL [Escherichia sp. 3_2_53FAA]
gi|227839159|gb|EEJ49625.1| DMT superfamily drug/metabolite transporter [Escherichia coli
83972]
gi|300300589|gb|EFJ56974.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
185-1]
gi|300305846|gb|EFJ60366.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
200-1]
gi|300408284|gb|EFJ91822.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 45-1]
gi|315285402|gb|EFU44847.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
110-3]
gi|315292904|gb|EFU52256.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
153-1]
gi|324012678|gb|EGB81897.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 60-1]
Length = 325
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 21 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFIHGD 78
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 79 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 138
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 139 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 198
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 199 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 258
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 259 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 317
>gi|315917985|ref|ZP_07914225.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691860|gb|EFS28695.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 299
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 80/300 (26%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + +WG + ++ + + R S V I
Sbjct: 4 NQFLLGNGALLLTSFIWGSAFVAQVTGMDLIGPFTFSASRCFLSTLFVLALIFLQKE--- 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
KD K + + L + L TSF + V+ LG F
Sbjct: 61 --KDDTKMKDLLFGGIACGLFLFLGSSCQQVGLQYTTAGKTSFITSLYIVLVPLLGIFFK 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
K+ +N +A L + L ++ + + + + A
Sbjct: 119 KK-VNLFTWMAVFLGTVGLYLLAMSGLTEGANINKGDFFVFLGSFFWAGHILVIDYFTKK 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ A+ L + + G K
Sbjct: 178 VNPIKLSCLQFAVTTCLAASLALSIETPTLPNIFASWKSIAYAGILSGGIAYTLQIVGQK 237
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ + ++ +L + + + I+ IA++V +P+ + K
Sbjct: 238 HTTNTTLASLILSLESVFGAIAGFIVLHERLKPSEILGCIIMFIAILVAQIPSDLFQKKK 297
>gi|315281079|ref|ZP_07869793.1| putative integral membrane protein DUF6 [Listeria marthii FSL
S4-120]
gi|313615272|gb|EFR88703.1| putative integral membrane protein DUF6 [Listeria marthii FSL
S4-120]
Length = 311
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 97/302 (32%), Gaps = 18/302 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ WG T+ + + + S R+ + V + K
Sbjct: 4 YFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKKWRLPTKREF 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + G L G P++ +FL+ER+
Sbjct: 64 GLVFLASIFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSVIFLRERIGA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFARKTIPVGSS 193
+ + L I + ++ L +G + ++I A ++ T+ G
Sbjct: 119 WRAVGFLAGIFGVSLVVLSNGTGVSGISIGDIYIFIAMASQAFSFIIIKKLAGTMDTGLM 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G+ + + + + A+ + LF++ + +F +++Y + +
Sbjct: 179 TGYMLLLGSVMLFAISGFIEPNGVSELMAVHSWKLWLLFVVSAVVATAFGNFVYNYAVGK 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S I PL ++ ++ L + I + + F ++I +++ + + K
Sbjct: 239 IGPSRSAIFMNFNPLFSLIGALLFLGEAIRIPQLVGFIFIIIGVLLGSGALMDLIYERKK 298
Query: 314 KK 315
++
Sbjct: 299 RR 300
>gi|295132218|ref|YP_003582894.1| integral hypothetical protein [Zunongwangia profunda SM-A87]
gi|294980233|gb|ADF50698.1| integral membrane protein [Zunongwangia profunda SM-A87]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 96/301 (31%), Gaps = 20/301 (6%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ A ++G+ + + + I RVL + + +
Sbjct: 3 KRLLAIFAATGASAIYGLNHTIAKGVMPSHIEAFGFIMLRVLGAAILFWILSPFAPKEKV 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
KD + ML + + ++ FF L +S V+PV+ + L S+ L
Sbjct: 63 EKKDWPR------MLCCAIFGMCINMLFFFKGLSLSTPINSSVIITVSPVMVLILASIIL 116
Query: 140 KERLNHLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFARKT 187
KE++ L+ + + L + + G + + +
Sbjct: 117 KEKITLLKGVGIAFGLSGALALVVFSTDSVTNAPNIPLGNLMFIVNAFSYGLYLVIVKPL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + ++ + V ++ F + F L + +
Sbjct: 177 TKKYHAITLMKWLFLMGVFLNLPVTYSEFVAVDWFHLPFDAIWRMAFVVAGTTFSTYLLN 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y +K+ ST+ + Y PL+ I+ ++ + + T++ +V + + +
Sbjct: 237 IYALKQLSASTISVFIYLQPLIAIIYAILVGADQLTTIKVAAGLLVFVGVYLVSFKKTKT 296
Query: 308 S 308
Sbjct: 297 R 297
>gi|260466552|ref|ZP_05812741.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259029701|gb|EEW30988.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 307
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/293 (16%), Positives = 93/293 (31%), Gaps = 13/293 (4%)
Query: 14 LSKENASLPTMM-----GTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGV 67
+++ A T+ G L + L+ + ++L SV +V+ R + + +
Sbjct: 1 MTQPVAQNSTIRNVLLAGILLMLAGDFLFALNDAMGKWLVASFSVGQVVLIRSIGAFFVL 60
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
I G + + T L A++ Y
Sbjct: 61 GPMIANQGAGRLFQMERPGLQILRVVATTLDTALF------YAAVVYLPLADVMSFYMAG 114
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
P+ L L E++ + A LL +LIM S + + FA
Sbjct: 115 PIYVAALSHFLLGEKVGWRRWAAILLGFCGVLIMLKPSSAAFSLSSGFALVGSIAFAFAI 174
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I G + + +V G + + D ++ G+++ +
Sbjct: 175 ILNRRLRGTSDTNL-VTWQTIGTLVVGGVMTIGAWQTPSALDFGAMLLLGIVSCGAHLMI 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ +K A ST+ + YT L +V + I GIVV+A +
Sbjct: 234 TRALKLAPASTLAPLHYTLLLWAVVFGLAFFGDVPGPRILIGSGIVVLAGLFI 286
>gi|229553617|ref|ZP_04442342.1| DMT superfamily drug/metabolite transporter [Lactobacillus
rhamnosus LMS2-1]
gi|229313037|gb|EEN79010.1| DMT superfamily drug/metabolite transporter [Lactobacillus
rhamnosus LMS2-1]
Length = 324
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 89/305 (29%), Gaps = 10/305 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N + + G +F I WG + ++TQ L V L ++ R+ ++ +
Sbjct: 10 NQNDQKLKGVIFAVVGAIFWGASGIFTQMLFTNAGVRPLWLVGIRLFFAGL-LLVIWSSL 68
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L A+ +++F+ + + A+ + F+ PV +
Sbjct: 69 KDLRQLGTIWKNRHDAMLLILFAFLGMVPSQLTYFLAISAGNAATATILQFLGPVFILLY 128
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ + ++ L ++ ++ + LSLA A +
Sbjct: 129 VAFATRQMPRRIDFVSITLALIGTYLLVTRGRLTSLSLAPAAVFWGIMAGVSQALYTLLP 188
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY----- 249
+ + ++ + L P + +F
Sbjct: 189 RTLLAKYDARAVTGWSMLLGSLPFLPQYVLRRNPVLTLPNLGAIAFVVIFGTMFAYLLVL 248
Query: 250 -GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ G++ PL +V L + ++V+ ++ LP
Sbjct: 249 GSLHYISPVATGMLSAFEPLTATTLAVTRLHIAFGPAEWLGGFLIVLNTLLQALPFNKLQ 308
Query: 309 GKNKT 313
+
Sbjct: 309 HVQRR 313
>gi|241662545|ref|YP_002980905.1| hypothetical protein Rpic12D_0933 [Ralstonia pickettii 12D]
gi|240864572|gb|ACS62233.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii
12D]
Length = 311
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 92/292 (31%), Gaps = 14/292 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G L + + +G ++T + +V+ ++ R + + + + G+
Sbjct: 16 KLLGVLLIAVSAASFGAMAIFTHYAYASGANVVGLLIVRFVIAAAALMVVMRVRRIGIPP 75
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G+ A F AL L + ++ P+ L ++FL+
Sbjct: 76 WSR------VAGLAAMGGIGYAGQSFAFFTALNYAPASLVALLLYLYPMFVTVLAAIFLR 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV------GSSE 194
ERL IIA +L + + +G+ S+ A +
Sbjct: 130 ERLTATAIIALVLCSVGAGLTVGGAGLSGGSVLGIALGVASAVIYSIYITVGARVTRGLD 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ Y H L GL F G+++
Sbjct: 190 PLACTTVICTAAAVVYTGMALLGAPAHLPGTFSGWAAALAIAGLSTVVAILTFFAGLQKL 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ P++ ++ + +L + I ++ +++ ++
Sbjct: 250 GAAQASMLSTLEPVVTVLLAALLLGESIAPMQMTGGALILAGVLWLTRADAK 301
>gi|114765447|ref|ZP_01444557.1| hypothetical protein 1100011001321_R2601_10174 [Pelagibaca
bermudensis HTCC2601]
gi|114542157|gb|EAU45188.1| hypothetical protein R2601_10174 [Roseovarius sp. HTCC2601]
Length = 288
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 86/291 (29%), Gaps = 5/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A T G + ++ + ++ L +V V+ R + V +GG
Sbjct: 2 AEQNTKFGIWLMVLTTFVFALQDGISRHLSDSYNVYMVVMIRYWFFAAFVMAIAGRQAGG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L T + +F +L I A + + + P++ L
Sbjct: 62 LKAAAATT----QPWLQIFRGVLLVAEIWVMITAFVLLGLTESHAVFTAYPLLVAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ + A + + ++I+ SG A +A FA +
Sbjct: 118 ILGEKVGWRRWSAIGVGFIGVVIILQPSGGVFSPHAAVPLVAALMFALYGLLTRYVARRD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ V G + + PD ++ + + + A+ S
Sbjct: 178 TAATSFFWTGVSGAVTATLVGAWFWEPMSAPDWGWMALLCITGASGHYTLIKCYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V Y + + + + + + I+V A + L +
Sbjct: 238 AVQPFAYLQLVFASALGMTVFNETLRPNVAMGAVIIVAAGLFTLWRERVKR 288
>gi|91763251|ref|ZP_01265215.1| Permeases of the drug/metabolite transporter (DMT) superfamily
protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91717664|gb|EAS84315.1| Permeases of the drug/metabolite transporter (DMT) superfamily
protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 282
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 88/284 (30%), Gaps = 7/284 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M F A+++ I + ++L + VL++ R +++ + F +
Sbjct: 1 MKAITFNLLAWVMLPIMDGFAKYLSADMPVLQITWARYFFTVAFTLPIMFLFYNKQLVWT 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D K + + IL F YA+ FV P+I +FL E+
Sbjct: 61 DKPK------LQIIRGLILLSANICFFYAISVISLAKALTLAFVAPLIVTAFSPIFLGEK 114
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A ++ + L++ + + ++A + + I +
Sbjct: 115 VGIRRWTAVIIGFIGSLVVIRPGFVEINLASLAALGTGVMYGFYLIITRKLSTSDNPLLT 174
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + L ++ + + G+ +K A S +
Sbjct: 175 LLLTGLVGLIAVSGLMPFVWVNPTPSQWSMMASIGVFACIGHLFLILSLKYADASKLAPF 234
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y + I+ + D + I++++ V
Sbjct: 235 SYFEIITNIIIGYYFFSDFPDNWTFLGLSIIIMSGVYISRRESY 278
>gi|332292289|ref|YP_004430898.1| protein of unknown function DUF6 transmembrane [Krokinobacter
diaphorus 4H-3-7-5]
gi|332170375|gb|AEE19630.1| protein of unknown function DUF6 transmembrane [Krokinobacter
diaphorus 4H-3-7-5]
Length = 276
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 92/284 (32%), Gaps = 9/284 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G +++ A + L ++LE L+V+ R + + +F ++
Sbjct: 2 IKGVVYMLIAAFAFTWMNLLAKYLEDFHPLQVVFFRCVGTFIFIFPYMLIKR-------- 53
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L+ + V + + + P+ S FLKE++
Sbjct: 54 VPVIGSNFSWLITRGILSFVSLALYFVVIQRIPLGSAVALRYTAPLFSAIFALWFLKEKV 113
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q +A ++ ++ L++ I + S+ V + ++
Sbjct: 114 KPWQWVALVISVIGALVLKGVDFRIDTISFILIIMSSILVGGVFTIVRYLGSREHFLTII 173
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ + F + + F + + A +TV ++
Sbjct: 174 NYFMVISIIGSLFFIQHWRMPVGVEWWYVSGIG-VFGLFGQVFLTRSFQLADTATVAPIK 232
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + ++ F+ + DT + G++VI M++ +
Sbjct: 233 YMELVYALILGYFLFNERYDTAPLVGMGVLVIGMLLNVWVKRRA 276
>gi|262280984|ref|ZP_06058767.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257884|gb|EEY76619.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 308
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 84/296 (28%), Gaps = 14/296 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G+ F C+ L+ ++ + +S L + + + +
Sbjct: 10 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDATVLMALRMLSALPFFLLICWFNRHHNQG 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+K + ++ L+ L F+ P ++V + S K++L+
Sbjct: 70 IKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIVSSFLYKQKLD 129
Query: 145 HLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ A L ++ L + + S +
Sbjct: 130 AKSLFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSLVFASAVAFAGYLLLTPPLIKKFG 189
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ YV+ L + + L+ +
Sbjct: 190 SWNFTGLALTVACIGTLTHYVLSTPQPIQLLLQLPSSVIWYGVGLGFLVTVLPTVMLMQS 249
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + + + + +++ L
Sbjct: 250 IERLGASQSAMIASIGPVLTILLAVTFLNEHLNMWQWVGCILNIAGVMIITLRKKR 305
>gi|260463126|ref|ZP_05811329.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259031247|gb|EEW32520.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 319
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/298 (9%), Positives = 88/298 (29%), Gaps = 17/298 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+M G ++L + +++ ++ + R+ + + +
Sbjct: 19 SSMTGYPAAVLCWLLSAGVYIAAKWVAPEMPPWGLCFWRLTLACAILLPIV----HRHHD 74
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +AV ++ A L + G + L ++PV+++ L L
Sbjct: 75 AMIGLLRTRAVEVVAVGAIGLTLCQGMIYHGLSHTDATTAGIIMALSPVMTMVLARFVLG 134
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTI 188
E L + + AL+ + ++ + H G + + R+
Sbjct: 135 EPLGLWKSLGALVALAGMIFIVAHGNLAALLQLKVNAGELWIVGSAFCWGLYTVLLRRAK 194
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + E + G + ++ +++
Sbjct: 195 FGIELLPMVVLLLGAGALVALPFHVWELFNDERSAMDIDSVLALAYLAGPGGALMYYLYN 254
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ S ++ Y + + + + +L + + + +V +V+ +
Sbjct: 255 KSVETLGASRASMLLYLQTVFVAMLAYLLLGEGLHDYDLVGAAFIVAGIVLATVVKSR 312
>gi|225857077|ref|YP_002738588.1| membrane protein [Streptococcus pneumoniae P1031]
gi|225724549|gb|ACO20401.1| membrane protein [Streptococcus pneumoniae P1031]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 97/298 (32%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ +I++ + I ++ H L + ++ + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSAFTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|327399072|ref|YP_004339941.1| hypothetical protein Hipma_0912 [Hippea maritima DSM 10411]
gi|327181701|gb|AEA33882.1| protein of unknown function DUF6 transmembrane [Hippea maritima DSM
10411]
Length = 299
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 90/298 (30%), Gaps = 15/298 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A WG+ + +E + R L+
Sbjct: 6 YLLLVVATAFWGVGFPIAKIGVEYIHPFSFAFLRFSLVFVLFVLFFKLSLYNLAEKLFLN 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + T + ++ FF++AL + S P+I+ + + LKERL
Sbjct: 66 ----FKLLFLMALTGIFLYGIFFLFALKFAKASDVSLISGANPIITAIIAWIVLKERLTP 121
Query: 146 LQIIAALLIILSLLIMT----------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L ++ + + + + L+ + + +A T A +
Sbjct: 122 LGVLGICVSFVGIAFIVSKGDLKTITTLNFNLGDFLMLLATTMWAVYSVITKKALRGLST 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ AL ++ F G H + F + GIK
Sbjct: 182 TEAVCLSSLLGALIFLPLAVFKGNLHLTYPFKAWASLMYMVLFSTIIAFSAWYNGIKEIG 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + P+ +++SV +L + + I V++ +V+ K
Sbjct: 242 ATKASVFVNLVPVFGVITSVVVLGESLSFYEVIGGLFVIVGVVMTNKRVSGEHRLQKQ 299
>gi|322419267|ref|YP_004198490.1| hypothetical protein GM18_1750 [Geobacter sp. M18]
gi|320125654|gb|ADW13214.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M18]
Length = 306
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 89/290 (30%), Gaps = 12/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + + + + L + ++R++++ + ++
Sbjct: 13 YLAILVGVFAVSFSSILVR-VCTAPPLVIAAYRLIFTFCFLAPFTLWGG----APALRGM 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + S LA+H+ + +L + P+ V +F +ER+
Sbjct: 68 TARQMLLSAASGVFLALHFVTWFISLKYTSIASSVVLVTTQPLFVVLGSWIFFRERVPRK 127
Query: 147 QIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + L +++ G + ++A + + G
Sbjct: 128 ALYGSFLAFAGSVVIGATDFQLGEKAFFGDLLALFAAVMVSGYLLIGRRLRGGVPLTGYT 187
Query: 204 AIPA----LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + G + +F+ + +F++ ++ + S V
Sbjct: 188 FVTYGASAVMLAIAALVGGYSFYPYPGQDWLIFVALALVCTILGHTVFNWVLRYVQASVV 247
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ PL I+ + L + + + I+ + ++ T +
Sbjct: 248 SVSILGEPLGAILWAAVFLGENPTPRQALGGAIIFSGLYLFTRVTARDKK 297
>gi|116511729|ref|YP_808945.1| DMT family permease [Lactococcus lactis subsp. cremoris SK11]
gi|116107383|gb|ABJ72523.1| permease of the drug/metabolite transporter (DMT) superfamily
[Lactococcus lactis subsp. cremoris SK11]
Length = 299
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 90/294 (30%), Gaps = 11/294 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N GTL+ A +WGI+ ++ Q S L + S R+ + + Y
Sbjct: 2 NVKKQIFKGTLYAVVAGCMWGISGIFGQLFFRDYHGSPLWITSTRLTIAGIILLAMS-YS 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ ++ + F+ A+ + + PV +
Sbjct: 61 RDHKRFFDVWKSKKNMPTLFLYVFGGVFSVQYFYYVAIQLSNSATATILQYTAPVFIMLY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKT 187
+F ++ ++ +L ++ + ++ + L + + ++
Sbjct: 121 LFIFQRQVPKPKSVLFVILAMIGVFLLITNGNIKHLSISPLALVTGLLAGVAVVIYSIIP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
P+ G + A +F + + L + + F +
Sbjct: 181 RPLLDKYGALNMTGWGMMLAGIACNIFYPVWRINFRIEPLSIFYVLTISIVGTALAFLLL 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V + T PL + S+ + + + + +V++++++
Sbjct: 241 LRAFQLISPLVVSVATATEPLTSVFLSIPLFGLKLTLLEMVGIVMVIVSVILLS 294
>gi|330448198|ref|ZP_08311846.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492389|dbj|GAA06343.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 92/298 (30%), Gaps = 14/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M+G + A + + ++L ++++ R +++P +F I +
Sbjct: 6 NNMLGAFLIIIATLSLTMKDSADKYLIQHGYHPIQMVFFR--FAIPFLFMLIFMPKQTKT 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T A + + AL + + + + G++F
Sbjct: 64 AILSTNGKLLLR------AALFLTCAITSVIALNYIPLEIYIIIVQMGSIAYMLGGAIFF 117
Query: 140 KERLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
KE L +IIA +L + ++++ + + L + + + + T + SS
Sbjct: 118 KETLTLPKIIATVLGFIGVIVVINPTNVGGLHWVYLLPLLIAATNSGYNLITKTIDSSIS 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + ++ + + ++ + A+
Sbjct: 178 LVSVLINSFFVLGSVATISLIVQPDIWKTPSLTALPYFLTIPVVTIVSQLCLIKAMNVAE 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S V Y L + + + T I +VIA ++ +
Sbjct: 238 ASHVAPFFYFQILFSCLFGYWFFNEIPTTYTIIGAIFIVIAGLIITYANYKPGWRKPK 295
>gi|317048974|ref|YP_004116622.1| hypothetical protein Pat9b_2766 [Pantoea sp. At-9b]
gi|316950591|gb|ADU70066.1| protein of unknown function DUF6 transmembrane [Pantoea sp. At-9b]
Length = 301
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 88/282 (31%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W I + ++ + + +R W L V G + +
Sbjct: 3 FLFPLVAVLIWSINTIVSKLSAGSIDPAAISFYR--WILALVVLTPFALPGVWRHRRQIV 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ + ++ YA + + P++++ L V L+
Sbjct: 61 AS--SGRLLILGLLGMVLYQSLAYYAAHSVSAVMMGILGATIPLLTILLSLVVLRLAPTR 118
Query: 146 LQIIAALLIILSLLIMTLHSGI--------PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ LL L+ + L + ++Y +
Sbjct: 119 GILFGGLLSFAGLVWLVSAGNPAQLLDQRLGNGELMMLAASTSYALYGVLTKRWAIPLPT 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ GF L L L + ++ G++R S
Sbjct: 179 WQSLYVQIVFGVLLLLPGFLRAPDVSLNTHNIPLVLFAGLFASIIAPFLWILGVQRLGAS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T I P + +V L + + I G+ ++ +++
Sbjct: 239 TTSIFMNFVPAFTAIIAVLFLHEQLHAYHWIGGGMTLLGVIL 280
>gi|256789036|ref|ZP_05527467.1| integral membrane protein [Streptomyces lividans TK24]
gi|289772929|ref|ZP_06532307.1| integral membrane protein [Streptomyces lividans TK24]
gi|289703128|gb|EFD70557.1| integral membrane protein [Streptomyces lividans TK24]
Length = 316
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/314 (11%), Positives = 94/314 (29%), Gaps = 15/314 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFA 70
+S + LP G L++ A + WG + + + + R L + A
Sbjct: 1 MSNAVSGLPVGRGLLYLIVAGVAWGTAGAAASLVYRASDLGPVALSFWRCAMGLVLLLAA 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+++ + + LAV + A+ + + + +
Sbjct: 61 RPLRPRVRPAVREPFARKTLRAGV--TGVGLAVFQTAYFAAVQSTGLAVATVVTLGAGPV 118
Query: 131 SVFLG---------SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY 181
+ LG + +L++ G+ L L+ A
Sbjct: 119 LIALGARLALGEQLGAGGAAAVAGALAGLLVLVLGGGSATVRLPGVLLALLSAAGYSVMT 178
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLN 240
R G ++ + A+ +L + + G L +
Sbjct: 179 LLTRWWGRGGGADAAGTSVGAFAVTSLCLLPFALAEGLVPHTAEPVRLLWLLAYVAAVPT 238
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + ++ G + +TV ++ P+ +V +L + + +++ ++
Sbjct: 239 ALAYGLYFAGAAVVRSATVSVIMLLEPVSAAALAVLLLGEHLTAATLAGTLLMLGSVAGL 298
Query: 301 LLPTVINSGKNKTK 314
+ + + +T+
Sbjct: 299 AVAETRAAREARTR 312
>gi|229068500|ref|ZP_04201801.1| Transporter, EamA [Bacillus cereus F65185]
gi|228714642|gb|EEL66516.1| Transporter, EamA [Bacillus cereus F65185]
Length = 320
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R L ++ + + L K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWLIAIVCLLPMV-----WLKEKKILPPRTAIISLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTVVVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WLIAIVCLLPMVWLKEKKILPPRTAIISLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|239999582|ref|ZP_04719506.1| Tou6 [Neisseria gonorrhoeae 35/02]
gi|240014757|ref|ZP_04721670.1| Tou6 [Neisseria gonorrhoeae DGI18]
gi|240017205|ref|ZP_04723745.1| Tou6 [Neisseria gonorrhoeae FA6140]
gi|240113370|ref|ZP_04727860.1| Tou6 [Neisseria gonorrhoeae MS11]
gi|240116283|ref|ZP_04730345.1| Tou6 [Neisseria gonorrhoeae PID18]
gi|240118571|ref|ZP_04732633.1| Tou6 [Neisseria gonorrhoeae PID1]
gi|240121280|ref|ZP_04734242.1| Tou6 [Neisseria gonorrhoeae PID24-1]
gi|240124114|ref|ZP_04737070.1| Tou6 [Neisseria gonorrhoeae PID332]
gi|254494296|ref|ZP_05107467.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|260439903|ref|ZP_05793719.1| Tou6 [Neisseria gonorrhoeae DGI2]
gi|268595392|ref|ZP_06129559.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268599444|ref|ZP_06133611.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268601948|ref|ZP_06136115.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268604278|ref|ZP_06138445.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682737|ref|ZP_06149599.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|293398511|ref|ZP_06642689.1| Tou6 [Neisseria gonorrhoeae F62]
gi|226513336|gb|EEH62681.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268548781|gb|EEZ44199.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268583575|gb|EEZ48251.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268586079|gb|EEZ50755.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268588409|gb|EEZ53085.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268623021|gb|EEZ55421.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|291610982|gb|EFF40079.1| Tou6 [Neisseria gonorrhoeae F62]
gi|317164830|gb|ADV08371.1| hypothetical protein NGTW08_1409 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 291
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/282 (10%), Positives = 83/282 (29%), Gaps = 17/282 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 1 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 54 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 114 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 174 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G++ P++ ++ +V IL + + V + +V+ A
Sbjct: 234 NASGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATF 275
>gi|197106429|ref|YP_002131806.1| hypothetical protein PHZ_c2968 [Phenylobacterium zucineum HLK1]
gi|196479849|gb|ACG79377.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 278
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 81/265 (30%), Gaps = 15/265 (5%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
+V + + R W+L V + + L + + + + SA +A
Sbjct: 1 MAGEVPPVALSFWR--WALALVLVTPLAWPHLKRDLPELKRRWR--TLAALSALGVATFG 56
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
Y L T + P + + G + L +R+ Q+ L ++ +L +
Sbjct: 57 VLLYYGLQTTTALNSVVMQAAIPPLVMLFGWLGLGDRVGRWQVAGVALSLVGVLAVVTRG 116
Query: 166 GIPLLSL-----------AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
L V ++ Y + P + +A+ L +
Sbjct: 117 RPWDLLHLGLNPGDGLILVGVVFYAIYSLVLRRRPQVHALSLLFATFAIALVLLAPLYLI 176
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
+ G + + + ++ G++ + + + PL V +
Sbjct: 177 EIAAGRRIVVSPESLAGIAYVAVFPSFLSYLFYNRGVELSGAARASQYLHVQPLFGAVLA 236
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVV 299
V +L + +++ +++
Sbjct: 237 VLLLGESFRLHHAAGLVLILAGILM 261
>gi|153938463|ref|YP_001390071.1| EamA family protein [Clostridium botulinum F str. Langeland]
gi|152934359|gb|ABS39857.1| transporter, EamA family [Clostridium botulinum F str. Langeland]
gi|295318163|gb|ADF98540.1| transporter, EamA family [Clostridium botulinum F str. 230613]
Length = 293
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 100/285 (35%), Gaps = 12/285 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ G L+ + + S ++ R + VF + +S
Sbjct: 9 LLSMLIVGSIGLFVRSI-PFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNI----KAN 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S L+V+W A + Y+ PV+ + L + LKE L+ L+++
Sbjct: 64 LWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLC 123
Query: 151 ALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ L + + + + + +G + L
Sbjct: 124 IVAALVGLACIAGVSKKAGANDFVGILYGLGSAVLYATVIFLNKCLKDIKGIESSIVQLG 183
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ + + S G + P L LI + V+ ++ ++ +V +
Sbjct: 184 VSAISLLAYVLMSEGFKLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVASLS 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P++ I+ + L + + V+ I +++ A +
Sbjct: 244 YIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKK 288
>gi|226946017|ref|YP_002801090.1| hypothetical protein Avin_39760 [Azotobacter vinelandii DJ]
gi|226720944|gb|ACO80115.1| Conserved Hypothetical Protein [Azotobacter vinelandii DJ]
Length = 290
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 82/277 (29%), Gaps = 10/277 (3%)
Query: 36 LWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
+G++ ++ + + ++ R L+++ + + L
Sbjct: 16 FFGLSGIFGKLALATPAV-IVFGRALFAVAALLPFA------RPDTDYRSPGWRRRLALA 68
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +L HW F A+ L + + P +V L + +ER+ + L+
Sbjct: 69 GAGLLLGGHWWSFFVAVKVSGVALATLGFASFPAFTVLLEGLLFRERVRAAEWGVVALVS 128
Query: 156 LSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
L L+++ + + AV + G L V
Sbjct: 129 LGLVLVGPNFDFASQTTPGLAWAVLSGLLFALLSVSNRAITPGVKPAQAALWQNLAILVC 188
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ + + L + +F ++ + ++ P+ I+
Sbjct: 189 GLPPAWPHLPAASALDWLWIALLGLLCTALAHSLFVASLRVLNARSASVVFALEPVYGIL 248
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + ++++A ++ +
Sbjct: 249 FAWWLFDERPGARMLAGGALILLATLLSARLSRHAPR 285
>gi|319780096|ref|YP_004139572.1| hypothetical protein Mesci_0349 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165984|gb|ADV09522.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 313
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 92/291 (31%), Gaps = 9/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
L + Y+ + +++L +SVL V R + V + + +
Sbjct: 17 ILCMLSTYVCFTFLDTSSKYLVLAGISVLVVAWVRFAVHVILVGTLLRGWRQPMRF---- 72
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
P + + L F + AL + Q T+ YF P++ L L E
Sbjct: 73 --RPVNLPAHILRGAFLFGSTIFNVLALKSLQLAETTSIYFFGPMVITALAGPLLGEWAG 130
Query: 145 HLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +A L +LI+T G+ + A+ + S E +L
Sbjct: 131 WRRWLAILAAFAGVLIITRPGVGVFGIGHLFALGSMLSNCFYVIMTRRMSATETSESLIL 190
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
++ + L+ G+ + + A + +
Sbjct: 191 FSALAPALLLLPLLPFSFSLPHDGWHWFVLLMLGVFGGVGHWLLVQAYRLATTTALAPYP 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y+ + MI+S + KQ D + I+V + + + +++
Sbjct: 251 YSQMVWMIISGWIVFKQFPDRWTLVGAAIIVASGLYIVHREHRLRLRSRAA 301
>gi|229542068|ref|ZP_04431128.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
gi|229326488|gb|EEN92163.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
Length = 338
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 80/296 (27%), Gaps = 11/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
A G V +LWG++ Q+L Q+ + + R+L S + Y
Sbjct: 41 AHTLRAKGIALVLSGAVLWGVSGTIAQYLFQHLQMDMQWLTVMRLLVSGLLLLGFC-YGR 99
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ ++ F+ + + A+ + + VI
Sbjct: 100 ERNRVTGVWKDPASRRDLIFFAVFGMLGVQYTYFAAIRYGNAATATILQSLECVIVPCFL 159
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTI 188
+ + + A L + ++ H L I ++A + + I
Sbjct: 160 AARFRRMPGRRTLFAVFLAVAGTFLLVTHGSFTTLSISGKALFWGILTAFTAAFYTLQPI 219
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + + + + + F +
Sbjct: 220 KLLHQWGADVTVGWGMLIGGAVLSFIHPPWHAAGNFSPAAVPGIAFVILFGTLVAFLCYL 279
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+K S ++ PL +V L P+ +++ + + L
Sbjct: 280 EGLKYLSASETTVLATAEPLSAAFLTVVWLHVPLGFFDWAGALMIISTIFILALKG 335
>gi|257053090|ref|YP_003130923.1| protein of unknown function DUF6 transmembrane [Halorhabdus
utahensis DSM 12940]
gi|256691853|gb|ACV12190.1| protein of unknown function DUF6 transmembrane [Halorhabdus
utahensis DSM 12940]
Length = 312
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 82/291 (28%), Gaps = 19/291 (6%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
A +WG + + L + + R + V + L +
Sbjct: 17 FLALGA--IWGSAFVAIKAGLSAFPPVLFAALRYDVAGVIVLGYAAVVTDPLPESR---- 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF-LKERLNH 145
++V S ++A + L + ++PV++ + +RL+
Sbjct: 71 -RDLAAIIVGSTLLIAGYHALLFVGELETTSATAAVIVSLSPVLTAGFARLALPGDRLSV 129
Query: 146 LQIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ L ++++ G L+ A R S E
Sbjct: 130 AGVAGLALGFAGVVVIAQPDPARLLSSDVIGPLLVFGAACAFALGSVLTRWLDAELSIEA 189
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
V + + + ++ F ++ + R
Sbjct: 190 MEGWSMVGGAVLMHVLSLALGESPAAVEWTPTALLSLGYLSLVASALGFLLYFALLDRLG 249
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ Y AP+ ++ +L + ID F ++++ V+ +
Sbjct: 250 PVEINLVSYVAPVFAALTGFLLLGERIDVATASGFVVILVGFVLLKRDAIR 300
>gi|332074770|gb|EGI85244.1| hypothetical protein SPAR148_1374 [Streptococcus pneumoniae
GA17545]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 98/298 (32%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ +I++ + I ++ H L + ++ + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSAFTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQANIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|281355192|ref|ZP_06241686.1| protein of unknown function DUF6 transmembrane [Victivallis
vadensis ATCC BAA-548]
gi|281318072|gb|EFB02092.1| protein of unknown function DUF6 transmembrane [Victivallis
vadensis ATCC BAA-548]
Length = 311
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 80/286 (27%), Gaps = 12/286 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + WG +FL + + R +F A +
Sbjct: 7 KGIGWALVSVFFWGTMFPVGRFLVAGGRMDPAVLGLLRFAIGGALLFGAGMLICRERMFQ 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + A ++A+ + + + + L
Sbjct: 67 LRRADWLRLPFQGLVGAALMALFLFVAQREVPVINASMLEAIV-PLQIFVIGLCCGRRSS 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLL--------SLAIAVTWSAYCFARKTIPVGSS 193
L + A + L +L + GI L + W+ Y +
Sbjct: 126 LLQFAGLAAGFIGCLLVLRILSADGIALKSLKFGDLLIFLSGLCWAVYTVWGREASNRLG 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F VL A V G + G I + + F ++
Sbjct: 186 GWVFSSWTVLWGAAWLGVYLCFQPGPLRWPSGWISWGWVIYFAIGPTALAFYGWNRAQHY 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
L+ +G+ EY P+L L + I ++ + +++ A+++
Sbjct: 246 ISLALLGLNEYFVPMLAAAFGFLFLGERITPLQLLGSVVIIGAVLI 291
>gi|229056702|ref|ZP_04196106.1| hypothetical protein bcere0026_8220 [Bacillus cereus AH603]
gi|228720638|gb|EEL72199.1| hypothetical protein bcere0026_8220 [Bacillus cereus AH603]
Length = 295
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 91/281 (32%), Gaps = 13/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + +
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIAFLLSGLIFY--------KHLFKI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K V A++L + + F + F +T + L ++FLK
Sbjct: 61 DFKTVKYAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPILSAIFLKHIPEKK 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ +L I+ + ++TL S G + ++ + A + +
Sbjct: 121 VIVGIVLTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVVQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L LF ++++ + L + F + + + G++
Sbjct: 181 LGFVGLFSLIFSLVMETPKLPSTIDSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + F + + + ++++++++ +
Sbjct: 241 FSLEPVFSAGFAFFFTGETLTGKGYLGATLILLSVLIAEVD 281
>gi|163761487|ref|ZP_02168560.1| hypothetical protein HPDFL43_11356 [Hoeflea phototrophica DFL-43]
gi|162281331|gb|EDQ31629.1| hypothetical protein HPDFL43_11356 [Hoeflea phototrophica DFL-43]
Length = 293
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 88/289 (30%), Gaps = 7/289 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T +G + + + L L++ R + +LP G
Sbjct: 9 RSRTTVGIALMCTGVACLCVNDALAKTLTANYPALQIQFMRNIIALPFAIVIAYKMGGAQ 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L + T+ F +L + FV P+ L ++
Sbjct: 69 AL------RSHKPVAHLLRGTLWIGATVMFFTSLKFLGLAEATALIFVAPLFITALSALI 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L+E + + +A ++ + +LI ++++ +A+ +A + +
Sbjct: 123 LREHVGWRRWLAVIVGFIGVLIAIRPGTAAFQTVSLLPLATAFVYALLMLSARWVDERES 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+L + + F + D + + + + + A
Sbjct: 183 VWTLLLYMTATGALLSIFIVPFVWVQVRTEDLGLFAAVAIFGTAGMTMMTQAFRFAPPVV 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V M+YTA + + I + D + + +++ + V +
Sbjct: 243 VAPMDYTAIIWATLLGWMIWNEIPDMLTFVGAAVIIASGVFIIWREHRA 291
>gi|149203924|ref|ZP_01880892.1| hypothetical protein RTM1035_10400 [Roseovarius sp. TM1035]
gi|149142366|gb|EDM30411.1| hypothetical protein RTM1035_10400 [Roseovarius sp. TM1035]
Length = 291
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 84/293 (28%), Gaps = 9/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G++ + + + + ++ + L + V ++I L G L
Sbjct: 1 MENLRGSILMVLSMGGFALEDMFIKRLADTLPVGQIIILLGLGGALIFGAMTRAQGGRLW 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ T+ V A+ S TP+ ++FL
Sbjct: 61 SRDLVSRSVILRNCGELVGTLGFV------MAIALTPLSSASAILQATPLAVTLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + A L+ +L++ ++ + + A + +
Sbjct: 115 GEAVGWRRWAAILVGFCGVLMVIRPGMAGFEPASLFAVLAVFGLAARDLATRRVPRSISS 174
Query: 200 MCVLAIPALFYVV--WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M + V + + + L L + ++ ++
Sbjct: 175 MQLSTYAFATLVPTGVILLAFHGTPAMPTAVNWRDLALALLCGVSAYYAIVAAMRLGDVA 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ Y+ + ++ V + + D GI++ + + + +
Sbjct: 235 VITPFRYSRLVFALIIGVTLFDERPDVWTLAGAGIIIASGIYTFWRERRLARR 287
>gi|108758144|ref|YP_634053.1| hypothetical protein MXAN_5916 [Myxococcus xanthus DK 1622]
gi|108462024|gb|ABF87209.1| putative membrane protein [Myxococcus xanthus DK 1622]
Length = 351
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/321 (8%), Positives = 78/321 (24%), Gaps = 19/321 (5%)
Query: 2 GKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRV 60
+T G + S WGIT + + L ++ R
Sbjct: 39 MSTSTSDMLGGGTEPSSRSQRLRADGALALITSF-WGITFVVVKDALGHGDPFSFLTLRF 97
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ + + + + + T L + + L T +
Sbjct: 98 IVGAVVLSVLA----------GRQVLIARNLRIGSMLGTFLFLGFSLQTVGLTTTTPSRS 147
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------- 173
+F + ++ L V ++ ++ + + L T G
Sbjct: 148 AFITGLCVLLVPLLSMVLYRKAPKFTSLLGVGVAAVGLYFFTQPDGGLGSGGLSSGDVLS 207
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + C T +G + V L
Sbjct: 208 LGGAVAYACHILMTERHAPKQGVMGLVAVQLWTVALLSALCLPFVERRVAWHPSFVGAVL 267
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ ++ + ++G R ++ + + SV + + + + ++
Sbjct: 268 VCGVFASAVAISLQTWGQARTTAVRAALIYSLESVFAALYSVLLGYETLGPREWLGGALI 327
Query: 294 VIAMVVYLLPTVINSGKNKTK 314
+ +++ +
Sbjct: 328 LSGVLMSEVGAAAWVWWRARA 348
>gi|260580892|ref|ZP_05848717.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260092515|gb|EEW76453.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 300
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/292 (19%), Positives = 118/292 (40%), Gaps = 5/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 10 QGILLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSLI 69
Query: 85 L----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + F++A L +G + YF+ P+I LG +LK
Sbjct: 70 TTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWLK 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ +Q IA LL + H+ ++ V + + I +
Sbjct: 130 ERLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGITL 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I ++ S L L G++++ ++ +S
Sbjct: 189 DIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIFA 248
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 249 VLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKKKVR 300
>gi|209524926|ref|ZP_03273471.1| protein of unknown function DUF6 transmembrane [Arthrospira maxima
CS-328]
gi|209494575|gb|EDZ94885.1| protein of unknown function DUF6 transmembrane [Arthrospira maxima
CS-328]
Length = 316
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/293 (10%), Positives = 86/293 (29%), Gaps = 11/293 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + VF + ++ + + L + +L S + A + +
Sbjct: 6 KSPHWLVIAIVFLGVVAISTGSIFVRLAIDAAGLRGVGFSLLISASRLSIAALLLTPTWG 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +A+ + + LA H+ +I +L ++ + + L ++
Sbjct: 66 RVSWRTYKREAIFYAIGAGICLATHFSVWITSLSYTSIAASTTIVTTSSIWVAVLSWLWW 125
Query: 140 KERLNHLQIIAALLIILSLLIMTL-----------HSGIPLLSLAIAVTWSAYCFARKTI 188
ER I+ + + +I+ L +L+L A+T + Y +
Sbjct: 126 HERPGKATILGMTIALSGGMIIGLADTKLSTVASNPIAGNILALMGAITAALYLMLGREA 185
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ A+ + G + ++ + F+
Sbjct: 186 QQRGLSLSAYIAIAYTVGAMILLPLPLLWGVNYTGHSATVYFYLILMGLVPQLIGHTSFN 245
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + R + V + P+ + + + +++ + +
Sbjct: 246 WAVNRTSPTLVTLAILLEPVAASFLGYLLFAEVPSRRLILGAIVILTGVAIAT 298
>gi|89056361|ref|YP_511812.1| hypothetical protein Jann_3870 [Jannaschia sp. CCS1]
gi|88865910|gb|ABD56787.1| protein of unknown function DUF6 transmembrane [Jannaschia sp.
CCS1]
Length = 309
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 92/303 (30%), Gaps = 4/303 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + ++ + + + + R +++P + +V
Sbjct: 2 SQPQNPLRGIGLKIASVCVFVTMASLIKVTADVIPPGQAVFFRSFFAIPVILVWLVMQHD 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+ LV + + G + L + V ++FLG
Sbjct: 62 LAHGLETANPMGHLWRGLVGTTAMGLGFAGLGLLPLPEVTAIGYAAPILVVIFAAMFLGE 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSS 193
RL+ + + ++I+ + + + A+ V A C A + V
Sbjct: 122 QVRLFRLSMVALGLGGVLIVLSPRLVVDPETADSAQALGAVLVLMGAVCAALAQVFVRKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ ++ + + + + L+ GL + + +
Sbjct: 182 VQTERTAAIVFWFSITASCLSLLTLPWGWVWPTTSQAVTLVAAGLAGGVGQILLTSSYRH 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
A S + EYT+ LL I F+ + ++V A + + K
Sbjct: 242 ADASLIAPFEYTSMLLAIGVGYFVFAEVPTGPMLTGAALIVFAGIAIIWRERQLGIKRGA 301
Query: 314 KKS 316
+++
Sbjct: 302 RRA 304
>gi|146276200|ref|YP_001166359.1| hypothetical protein Rsph17025_0143 [Rhodobacter sphaeroides ATCC
17025]
gi|145554441|gb|ABP69054.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17025]
Length = 294
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 87/297 (29%), Gaps = 5/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T +G + ++ + ++ L E SV V+ R + V +GG
Sbjct: 2 TEQNTRLGIGLMVLTTCIFALQDGISRHLAEHYSVFMVVMIRYWFFAAFVIAVAARQAGG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + + V +LA + + + + P++ L
Sbjct: 62 LAPAV----RSRFPVLQVLRGLLLAAEVCIMVLGFVKLGLVASHAVFTCYPLLVAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER+ + +A + +LI+ A+ +A FA ++
Sbjct: 118 VLGERVGWRRWLAIAAGFVGILIILQPGVAVFSPWALIPLGAALLFAIYSLLTRYVARGD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ G H+ D L++ + + A+ S
Sbjct: 178 SAAVSFFWTGTVGAIAMSAVGLWHWEPMAPQDWLWMAALCCSAALGHWFLIRAYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V Y + F+ + + + +VV A + L + + +
Sbjct: 238 AVQPFAYLQLPFAALLGFFVFNERPEINVILGACVVVSAGLFTLWREQVRARARAGR 294
>gi|29654633|ref|NP_820325.1| transporter, drug/metabolite exporter family [Coxiella burnetii RSA
493]
gi|154706863|ref|YP_001424772.1| transporter, drug/metabolite exporter family [Coxiella burnetii
Dugway 5J108-111]
gi|212212284|ref|YP_002303220.1| transporter, drug/metabolite exporter family [Coxiella burnetii
CbuG_Q212]
gi|29541901|gb|AAO90839.1| transporter, drug/metabolite exporter family [Coxiella burnetii RSA
493]
gi|154356149|gb|ABS77611.1| transporter, drug/metabolite exporter family [Coxiella burnetii
Dugway 5J108-111]
gi|212010694|gb|ACJ18075.1| transporter, drug/metabolite exporter family [Coxiella burnetii
CbuG_Q212]
Length = 305
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/289 (10%), Positives = 77/289 (26%), Gaps = 3/289 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ L +F +LWG+T + L +S + R + + I
Sbjct: 4 SVRAHLALFFITLLWGLTFPLIKDALGSISPSLFVVLRTSVASLILLPVIFLQRK--KTT 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+K +G + + I + + S + +
Sbjct: 62 FTMIKWTLVLGFFQSATYVFQSIGLESISSADSAFITALSVVVVPFLALIFLKSKPRWFD 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L + + I+ I + G + E + +
Sbjct: 122 FVTALLCLGGIFILTGANIFNMKGGDFWTLGCAVAYALYIVTLQAFSKKLKPEDTILALS 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ +L + + F L VF + + +S +
Sbjct: 182 YQILFSLIFPLLTAFYKTTASIFSWPVIIAVLFCAIFATGLVFYLQLRYQRYIPVSRAVL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ + + + I I +++++ V+ L S +
Sbjct: 242 IYAFEPIFAALFGYLLNGEAIYLNTVIGGFLILVSFVLSELFPSKKSSQ 290
>gi|153821102|ref|ZP_01973769.1| permease of the drug/metabolite transporter [Vibrio cholerae B33]
gi|153824773|ref|ZP_01977440.1| permease of the drug/metabolite transporter [Vibrio cholerae MZO-2]
gi|229510224|ref|ZP_04399704.1| hypothetical protein VCE_001628 [Vibrio cholerae B33]
gi|229517646|ref|ZP_04407091.1| hypothetical protein VCC_001669 [Vibrio cholerae RC9]
gi|229605454|ref|YP_002876158.1| hypothetical protein VCD_000396 [Vibrio cholerae MJ-1236]
gi|255746320|ref|ZP_05420267.1| putative membrane protein [Vibrio cholera CIRS 101]
gi|126521476|gb|EAZ78699.1| permease of the drug/metabolite transporter [Vibrio cholerae B33]
gi|149741729|gb|EDM55758.1| permease of the drug/metabolite transporter [Vibrio cholerae MZO-2]
gi|229345682|gb|EEO10655.1| hypothetical protein VCC_001669 [Vibrio cholerae RC9]
gi|229352669|gb|EEO17609.1| hypothetical protein VCE_001628 [Vibrio cholerae B33]
gi|229371940|gb|ACQ62362.1| hypothetical protein VCD_000396 [Vibrio cholerae MJ-1236]
gi|255736074|gb|EET91472.1| putative membrane protein [Vibrio cholera CIRS 101]
Length = 299
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 3 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFMSLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 119 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 179 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGGLLVISGVALSQLKIQRRN 289
>gi|317177976|dbj|BAJ55765.1| hypothetical protein HPF16_1168 [Helicobacter pylori F16]
Length = 298
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 95/297 (31%), Gaps = 4/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA + +L T F + + L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAFFYNIEKISLATATAFSQCAPIYTVLLSPFLLKEK 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L I ++++S + + + ++ + + + +
Sbjct: 121 LKRSALISACIGIVGVVLISDPSVENVGSVEIFMGILSGIFVSLAYITLRDLREYYDKQA 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEH---FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + ++ + D L++ G+ + +Y A
Sbjct: 181 VILAFAFGMSFLGLIGMFIDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTYAYMNA 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +EYT + ++ +++ Q +D ++ +++ + ++ LP ++ K
Sbjct: 241 PAGIIAPIEYTRIVWGLLFGLYLGDQFLDLKSSLGVALILCSGLLIALPALLKELKK 297
>gi|262372993|ref|ZP_06066272.1| permease [Acinetobacter junii SH205]
gi|262313018|gb|EEY94103.1| permease [Acinetobacter junii SH205]
Length = 305
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 99/303 (32%), Gaps = 19/303 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + ++L + G + V A ILWG T + +S L + + +
Sbjct: 1 MNSKTSNLSSHSGFIAVLIASILWGTTGTAASYAPNLSPLAIGAIAMGGGGLLQALLAHK 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ +GM+ + LA + + + S P+ +
Sbjct: 61 KILDHLPQIKSYYPLLLIGMISVAIYPLAFYSSMRMAGITIGTV----VSIGSAPLFTAL 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------------IAVTW 178
L F K+ L+ I+ + ++ +L++++ S IA
Sbjct: 117 LEKFFDKKALSLKWFISFIFGVIGVLLLSVGETHSHGSTQSISTDQKTIGIILGLIAALT 176
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ + M ++ ++ F G + F ++ + +
Sbjct: 177 YSLYSWAAKKMIDRGVDSKASMGLIFGFGALILLPTLFFTGSNLFDESVNLYVVAYMMLI 236
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +F Y +K ST + PL+ + +V ++ + + + + ++ + +
Sbjct: 237 PMFLGYLLFGYALKTISASTATTLTLFEPLVAALFAVLLVGEQLAPIGWVGMVLIFVCLA 296
Query: 299 VYL 301
V
Sbjct: 297 VLS 299
>gi|258511896|ref|YP_003185330.1| hypothetical protein Aaci_1929 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478622|gb|ACV58941.1| protein of unknown function DUF6 transmembrane [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 313
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 92/289 (31%), Gaps = 11/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G ILWG++ Q L + V+ +++ R++ + + A F G+
Sbjct: 21 RRFRGIGLALLGSILWGVSGTAAQVLFQADHVNPAWLVAVRMVVAGV-LLLAACCFKEGV 79
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
AV VF L + A+ + ++ P++ V S
Sbjct: 80 QAFAPWRAPHSAVRTAVFGLAGLLGVQYTYFAAIHAGNAATATVLQYMAPIVIVGYASAR 139
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ LQII L +L L++ + ++ + + ++ +P+
Sbjct: 140 SRRAPTALQIICVGLALLGCLLLVTNGHIERLAVSGACVAWGLLSAVAVAIYSIFPVPLI 199
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ G + V L L F ++ +
Sbjct: 200 AAFGPLSITAWGMLVGGAAVGLATAPYLPVPHLSAEAWCLVAFVVVFGTLIPFYLYLASL 259
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + ++ PL +V +L QP+ + G V++ + +
Sbjct: 260 RDITPADASLVASGEPLAATALAVTVLHQPLTWAALLGMGCVLLTVTLL 308
>gi|257466802|ref|ZP_05631113.1| hypothetical protein FgonA2_05130 [Fusobacterium gonidiaformans
ATCC 25563]
Length = 293
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 5/281 (1%)
Query: 28 LFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ F A W + T+ + Q+S +++ + R ++ + + F L +D
Sbjct: 13 FYAFLAVFFWASAFVSTKIVLQSGQLSAMDLGTLRYFFAAVLLLPLAILFKVRLPDSRDL 72
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K + + +A + + + T + +
Sbjct: 73 SKFAISGILGY-TAYMFFFNTASTMITPSTASVINAICPGVTAIFAYFLFYEKISWKGIF 131
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L I ++ LSL + I +L + A + + V L
Sbjct: 132 GLGISFIGILFLSLWNGSFSLNIGVLYMLAAALCLSMYNISQRSFVKRYNAMETMTHCLL 191
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST-VGIME 263
+LF ++ +G S L L + + ++ ++ +T V
Sbjct: 192 AGSLFLLLCHGKSLTLIPSLSKQMWIHLLYLAIFPSILSYYCWAKAMECCNKTTEVTNFM 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ P+L S ++K+ ++++ M+++ +
Sbjct: 252 FVTPMLATFLSFLMIKEFPTWSTYFGGALILLGMLLFQIEK 292
>gi|257465374|ref|ZP_05629745.1| hypothetical protein AM202_02605 [Actinobacillus minor 202]
gi|257451034|gb|EEV25077.1| hypothetical protein AM202_02605 [Actinobacillus minor 202]
Length = 282
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 90/280 (32%), Gaps = 14/280 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV + + ++ + L Q + +RVL+SLP F + +
Sbjct: 5 LLFVLLSICCLALGGIFVK-LSQFPAITTGMYRVLFSLPIFFLLTKVNKY------EYVM 57
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N K + + + LA+ + + + + P + + KE+++
Sbjct: 58 NSKEKMIAICAGVFLALDLILWNISFSYTTVANANLLANLVPFTVIPISYFIYKEKISRE 117
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFFIE 199
I+ +I + ++++ P L+ + + A +
Sbjct: 118 FILGGGIIFIGIIVLMGGKVNPTLNNFKGDGLAILTSIFYGLFIATVYKLRTKVSTIQLM 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + G + + L SY + + K S
Sbjct: 178 SYASIGCLIILLPVSLILEGIYIPYTFKDFYPLIGLALLSQILGQGGLSYCLGKIKASYA 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ T P++ + + FI + + + I+++ + +
Sbjct: 238 SLLVLTQPVISALYAYFIFNENLSFKEILGMFIILVGLYI 277
>gi|237748205|ref|ZP_04578685.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379567|gb|EEO29658.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 302
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 94/299 (31%), Gaps = 20/299 (6%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG T + T+ L +S +++ +R + + + F
Sbjct: 11 LMALVTVSIWGTTFVSTKVLIQHGLSPVDIFVYRFVLAYVCICFLA-------PKRLFAD 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ M+ A+++ AL S ++P+++ FL + E+L
Sbjct: 64 SIKDELWMVGAGFCGGALYFVTENTALGLTLASNVSLIVCISPLLTAFLVVLFYRNEKLR 123
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
II +++ + + ++ + L + R +
Sbjct: 124 KSLIIGSIMALFGVGLVVFNGHFVLKLSPAGDLLTAVAALSWAFYCLILKRLDTRYPTLF 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + ++ ++ + L + + F +++ +K
Sbjct: 184 ITRKVFFYGVLTVVPFMAFDPVHWDTAILVQPAVWMNLLFLSFIASMLCFIMWNVAVKEL 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
Y PL+ +++S +L +PI + +++ + + T + K
Sbjct: 244 GAIHATNYIYIVPLVAMLTSWLMLDEPITVMTLGGCALILTGVYLAERRTAVKKQVQKA 302
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 37/137 (27%), Gaps = 1/137 (0%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
L VT S + + V G + L YV + F
Sbjct: 8 WYHLMALVTVSIWGTTFVSTKVLIQHGLSPVDIFVYRFVLAYVCICFLAPKRLFADSIKD 67
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVRT 287
+ + + F + + S V ++ +PLL V + +
Sbjct: 68 ELWMVGAGFCGGALYFVTENTALGLTLASNVSLIVCISPLLTAFLVVLFYRNEKLRKSLI 127
Query: 288 IVFGIVVIAMVVYLLPT 304
I + + + + +
Sbjct: 128 IGSIMALFGVGLVVFNG 144
>gi|229114418|ref|ZP_04243836.1| Transporter, EamA [Bacillus cereus Rock1-3]
gi|228669097|gb|EEL24521.1| Transporter, EamA [Bacillus cereus Rock1-3]
Length = 320
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 91/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + L K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMV-----WLKEKKILPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMTLSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+++ L LL IA ++ + + + I
Sbjct: 148 FGVILALLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GIILLLPFNIGNFTVSNINTSFITSLLYTGIISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQILGTIVVVTGCYLFS 302
>gi|254452848|ref|ZP_05066285.1| DMT superfamily, permease [Octadecabacter antarcticus 238]
gi|198267254|gb|EDY91524.1| DMT superfamily, permease [Octadecabacter antarcticus 238]
Length = 293
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 93/288 (32%), Gaps = 7/288 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T L + + + L + ++++ R L +LP V ++Y G
Sbjct: 11 RTRQAILTICAGVAFLSMNDAIAKLLVERYDPVQIVFLRNLIALPMVGAVVMYKIGVSGF 70
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L+ G+L+ + L + F P+ L L
Sbjct: 71 VSNHLRVHAIRGLLMLGGAYMF------FKGLEALALAEATALVFSAPIFITALSVPLLG 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + A L+ + + I+ G ++ V +A +A I
Sbjct: 125 ETVGWRRWGAVLVGFIGVFIIVRPGGATFQPASLYVIGTAGLYALFMISARFLGPRESMW 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ LF +++ + + D FL+ + + + + A + V
Sbjct: 185 TMMFFVMLFPMLYAAPLAFVVWVQVQVSDLPFLVALAVFGTLGITLIGQAFRFAPAAVVA 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+YTA + + I + ++V++ + ++ +
Sbjct: 245 PFDYTALIWASLFGWLIWGDTPEMWTLAGAAVIVVSGIFIVIRESRQT 292
>gi|328867742|gb|EGG16124.1| hypothetical protein DFA_09796 [Dictyostelium fasciculatum]
Length = 651
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 97/301 (32%), Gaps = 22/301 (7%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ MG +++ + L+ + L + VS LE+ R + L G +
Sbjct: 357 KIKPHMGIVYMVFSAFLFSLLALLVKLTSSSVSSLEIAFIRSFYGLIGCLIILGSMKVN- 415
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L +P L + + Y L F +PVI+ L ++
Sbjct: 416 -----PLGDPSKRVFLTVRGFTGTMSLTAYFYTLSVLPLSEAVCISFTSPVITAALAAIV 470
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------------GIPLLSLAIAVTWSAYCFAR 185
LKER ++ I A+L ++ + I++ G L + A +
Sbjct: 471 LKERWGIVEAICAILSLVGVFIISKPPFLFGTPTYNESLPGHLRLIYILIGLGGACFSSF 530
Query: 186 KTIPVGSSEGFFIEMCVLAIPAL--FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ V ++ ++ V+ + F + ++L ++
Sbjct: 531 SFVAVRKIGPGTNPFVLVLYFSITSCVVLLPLTLLTKKFTIPQGTTWIWLSVLSIIALGA 590
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + GI+ K + Y + V +LK+ +D + +++ +
Sbjct: 591 QGLVNRGIQLLKAGKAASINYIQIVFTFFWEVLVLKESVDVWTLLGAALILCCAAITAFR 650
Query: 304 T 304
Sbjct: 651 K 651
>gi|282856499|ref|ZP_06265775.1| transporter, drug/metabolite exporter family [Pyramidobacter
piscolens W5455]
gi|282585684|gb|EFB90976.1| transporter, drug/metabolite exporter family [Pyramidobacter
piscolens W5455]
Length = 297
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 91/292 (31%), Gaps = 10/292 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + + ++ + + + + +R+ ++ + ++ L+
Sbjct: 8 YLALAAGVFMLSASGVFAK-VARAPAGVIAFYRLFFATLALLPWLLSHKNDRRELRS--L 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+P + LAVH+ + +L ++ + P+ SV G +FL ERL
Sbjct: 65 SPIQYAEGALAGFFLAVHYVMWFESLRYTSVASSTVLAALQPLFSVIWGRLFLGERLGAR 124
Query: 147 QIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + I+ ++ S L ++ + F I
Sbjct: 125 ALTGGAIAIVGSAVVGWSDFSVSSQSLWGDLLALVSGGVISLYFFCGQILRRRMGAVPYS 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + ++ F G FL + +F+ +K +TV
Sbjct: 185 VLSYGSSSAVLALYALFMGHPFTGYAPGTWGAFLGLALISTIGGQMVFNVLLKWITATTV 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P+ + L + + + +++ + ++ + +
Sbjct: 245 TMGILGEPVGTCFLAWLFLGETLSARQAAGIAVILAGLALFFAAQRQSQAER 296
>gi|167622111|ref|YP_001672405.1| hypothetical protein Shal_0170 [Shewanella halifaxensis HAW-EB4]
gi|167352133|gb|ABZ74746.1| protein of unknown function DUF6 transmembrane [Shewanella
halifaxensis HAW-EB4]
Length = 328
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/315 (14%), Positives = 97/315 (30%), Gaps = 19/315 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVY------ 73
T G L +LWGI + T LE + ++ R + + F
Sbjct: 2 SNTQKGWLAAIFVGLLWGIPWIVGTPILEVMDPQVLVWLRYTVAFVTLGFIFNIGLASGK 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ +L + P++ +
Sbjct: 62 MKKKTDFKLNWANRNDIFWAACCGIIGQGAFSFLSFLSLDYITASENGVIQGLIPILILS 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G + ER +QI+ AL L + I+ + I A +
Sbjct: 122 VGFLRHGERFTVMQIMCALGAFLGVAILVMDPQSETKGFNIGHLICLGSAASFATMAYAR 181
Query: 194 EGFFIEMCVLAIPALFYVVWNG------------FSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ +A +V + FS + F + +I ++
Sbjct: 182 AKLADKYGSVATMFHQFVFASLGFGLYLLVVGADFSSALNVFSSPLRILCIVILGVCISG 241
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ YG++R + G+ PL + +VF L + + +R + +V+ +M+ ++
Sbjct: 242 MSYLVYIYGMERVGVDGTGMALNLMPLSSFILAVFALGEQVTPMRLVAIAVVITSMIAFM 301
Query: 302 LPTVINSGKNKTKKS 316
N K + ++
Sbjct: 302 KLGNKNKAKAEEVEA 316
>gi|121635413|ref|YP_975658.1| hypothetical protein NMC1708 [Neisseria meningitidis FAM18]
gi|120867119|emb|CAM10886.1| putative integral membrane protein [Neisseria meningitidis FAM18]
Length = 294
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 11 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 64 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 124 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 184 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGVGCGWYAYWLWNKGMSRVPA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 244 NVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 286
>gi|320102916|ref|YP_004178507.1| hypothetical protein Isop_1373 [Isosphaera pallida ATCC 43644]
gi|319750198|gb|ADV61958.1| protein of unknown function DUF6 transmembrane [Isosphaera pallida
ATCC 43644]
Length = 473
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 77/284 (27%), Gaps = 13/284 (4%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
++ + + + + T L + VI+ L + A + + + +
Sbjct: 152 WLLASAFGFALMGVLTHELGHQADWSVIA---LARAIFMLGAALALARHAGIRLPIWRPT 208
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ A YAL P+ L + L + L +
Sbjct: 209 TLWIRSIAG----AFGMMCNFYALTVLPVADVLTLTNTFPLWIGLLSWLTLGQSLGRFEW 264
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A L ++ + ++ + SA A + + +G V + A+
Sbjct: 265 AAIGLGVVGVAVLQQPHFDQGGLAILLALASAVSTAIAMLGLHRLKGVDARAVVAHLAAV 324
Query: 209 FYVVWNGFSGGEHFFLGNIPDTL------FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ G D L+G G+ + + + + +
Sbjct: 325 GGLTALGAVLWRWDSASLAFDGWTARDGTLLVGVGVCGTASQLFLTRAYAASPPGRLAPL 384
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ L ++ + + + F +V+I +
Sbjct: 385 SLSQVLFAVILEAILFGRLPTAWAWVGFALVLIPTAAIMTQAAR 428
Score = 38.0 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 38/139 (27%), Gaps = 5/139 (3%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+L G LA A ++ + + + + +
Sbjct: 144 SLSLGSAGWLLASAFGFALMGVLTHELGHQADWSVIALARAIFMLGAALALARHAGIRLP 203
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+ + G F Y + ++ V + T PL + + S L Q
Sbjct: 204 IWRPTTLWIRSIAGA-----FGMMCNFYALTVLPVADVLTLTNTFPLWIGLLSWLTLGQS 258
Query: 282 IDTVRTIVFGIVVIAMVVY 300
+ G+ V+ + V
Sbjct: 259 LGRFEWAAIGLGVVGVAVL 277
>gi|313902082|ref|ZP_07835494.1| protein of unknown function DUF6 transmembrane [Thermaerobacter
subterraneus DSM 13965]
gi|313467644|gb|EFR63146.1| protein of unknown function DUF6 transmembrane [Thermaerobacter
subterraneus DSM 13965]
Length = 318
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/293 (10%), Positives = 77/293 (26%), Gaps = 18/293 (6%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
W + + +V+ +++ R L + + + G L + + + +
Sbjct: 13 WAGNWTIAKELVRRVNPADLVMARWLLASLVLAPIVYLREGRLPRPQGVD----WLWIAL 68
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A + A + Y +P ++ L L ER+ + L +
Sbjct: 69 CGLTGMAGYNTLQYVAQQQTTNINGTLIYTASPALTFLLAVPLLGERVTLRRAAGVALSL 128
Query: 156 LSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + +L T +
Sbjct: 129 AGTAWILAGGSLEVLRSWRFNPGDVLMVVASAGWAVYTVVTRFGTRRLSPLALTLYASAA 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ +G + L L + ++ + ++ G++R I
Sbjct: 189 GTLMMAATRGAALAAGRGAWSLSAGDTWAVLYIGVMSSAVAYLFWNEGVRRVGAGAASIF 248
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P+ V S +L + + V+ + + P + +
Sbjct: 249 ANLLPVYTAVLSTTLLDERLTLAHLTGGLAVLAGVYLVAAPAGGTRAVSSRAR 301
>gi|282878403|ref|ZP_06287191.1| putative membrane protein [Prevotella buccalis ATCC 35310]
gi|281299481|gb|EFA91862.1| putative membrane protein [Prevotella buccalis ATCC 35310]
Length = 305
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 86/287 (29%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + + +G+ PL++ + V+ +R ++ + ++Y L
Sbjct: 1 MNKLHGFVGAITSATAFGLIPLFSLPVLATGMPSTAVLVYRFAFACLIMLVVLMYQRQSL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + + + + ++ + + + ++ ++
Sbjct: 61 HLHFGESLRLMLLSIAYTGSAVFLIEGYRYLSSGIATVIMFSYPAWTALLMMIFRGEKAS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ +A + + + + + + L + S + + I
Sbjct: 121 VTTFSAIGLAVAGVCFLSGIENGVGNISVLGICLELLSGLSYAIYMVAYPTMNIRNMPTI 180
Query: 199 ---EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L + SGG + L +K
Sbjct: 181 KVNFYIFFFTMLLLMLYAIFTSGGLPAIHTGTTLLNLFLLGLLPTVVSNITLILALKNIG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ V I+ PL + + + +P T I F +++ A+V+ +L
Sbjct: 241 STLVAILGAFEPLTAMCIGIAVFGEPFTTSIAIGFVLILTAVVLLVL 287
>gi|219682579|ref|YP_002468962.1| permease [Bifidobacterium animalis subsp. lactis AD011]
gi|219620229|gb|ACL28386.1| putative permease [Bifidobacterium animalis subsp. lactis AD011]
Length = 305
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 85/294 (28%), Gaps = 11/294 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVY 73
E +G V WG+ ++ L + L + R + + +F
Sbjct: 12 EQTPRKMAIGIACVLIGGTCWGVNGAVSKILMEEYHAAPLWIACVREIIAGI-IFLVAAM 70
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
SL + + + T + + +++++ + V ++ +
Sbjct: 71 IGTPHSLRSAVTSWREYPKFVGAALTCVTLVQVAYLFSIHWTNAGTATVLQTVNLLMVLI 130
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
V K R ++I L + + ++ + LS+ + + A +
Sbjct: 131 YVCVRAKRRPTKREVIGVALAFVGVWLLATGGKLSTLSMPLPGLFWGLMDAFSCACLAII 190
Query: 194 E-------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
G + + + ++ L + F +
Sbjct: 191 PVGLIARYGNLTFNGLTFLISGLILLPFVKPWQNMPHFDARGWWLMAFTVVVGTVVAFWL 250
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F G+ R ++ P+ +SSV V + F +++I +
Sbjct: 251 FMAGVVRIGSMRATLLATIEPVTATISSVLWTGSVFTPVDIVGFVLILIMSFLV 304
>gi|150403609|ref|YP_001330903.1| hypothetical protein MmarC7_1696 [Methanococcus maripaludis C7]
gi|150034639|gb|ABR66752.1| protein of unknown function DUF6 transmembrane [Methanococcus
maripaludis C7]
Length = 296
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 93/292 (31%), Gaps = 21/292 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L +F I WG++ + T+ L + + + R + + I
Sbjct: 2 NDKSLGILLMFLTVIFWGVSFVATKIILVYIPPITLGFIRFAIAALILIVLI-------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ + ++ F AL + P+ + + +
Sbjct: 54 RTFPSYSKKDFLNLVFAGFLGITSYFIFENVALEYTTATNAALIAATVPLFYMIVSDLVE 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--- 196
+ + +Q +L+ + + ++ L+ + L I + +
Sbjct: 114 RRIPSKIQYFGSLIGLFGVSVLILNGRLILELNPIGDLLMIGAVLSWVLYTFVIQKLEKH 173
Query: 197 ---------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ +L++P + + + FL L ++ + +
Sbjct: 174 DNLKVTRDITLIGALLSVPFMLIEFGSKGALDLGVFLNLPLTLAVLYLAIFCSAIAYLFW 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I+ A ST Y P++ +++ ILK + +V+ + +
Sbjct: 234 NRSIRLAGASTTNNGIYFIPIVAMIADSIILKNIPNFYAIFGAILVLFGVYI 285
>gi|58040077|ref|YP_192041.1| hypothetical protein GOX1644 [Gluconobacter oxydans 621H]
gi|58002491|gb|AAW61385.1| Hypothetical protein GOX1644 [Gluconobacter oxydans 621H]
Length = 298
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/273 (10%), Positives = 73/273 (26%), Gaps = 1/273 (0%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
FV A + W + L ++ + + + R + +++ L D +
Sbjct: 11 FFVAVAILSWASAYPVVRIALHDLAPVPLAALRYAVAAVMAALWLLWKRPRRPELTDIPQ 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + IL + + + + + +
Sbjct: 71 ILACGIIGITVYNILFNCGEMTVSSGAASLLISAAPLMAGLLAMVFLGERMSRWGWAGSI 130
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ + +I L G + A +A+ + + VL
Sbjct: 131 LSFSGVALIAKGQSGGLSFGSGATLVFGAAVCAAFYTILQKGLIRRYGALPTIAYVLISG 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
A+F W L +F + + + I S + Y
Sbjct: 191 AIFLTPWLPQGLTSFSHASWQGQAAVLELGIFPAAFGYAAWGFVIGHLGASRGAALLYLL 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P + +V + + + I +V+ +++
Sbjct: 251 PPVTMVLAYLLTNEVPSLRTLIGGAVVMAGVIL 283
Score = 36.8 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 8/103 (7%), Positives = 26/103 (25%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L + L + + +F+ G
Sbjct: 37 VPLAALRYAVAAVMAALWLLWKRPRRPELTDIPQILACGIIGITVYNILFNCGEMTVSSG 96
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ APL+ + ++ L + + + + +
Sbjct: 97 AASLLISAAPLMAGLLAMVFLGERMSRWGWAGSILSFSGVALI 139
>gi|45862270|gb|AAS78885.1| Upf16.5 [Cloning vector pLAFR]
gi|295443854|dbj|BAJ06606.1| Upf16.5 [Cloning vector pKS800]
Length = 358
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 82/266 (30%), Gaps = 15/266 (5%)
Query: 56 ISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTR 115
+ R L + + + + + + + A +++ W ++
Sbjct: 102 MLLRALPAGLLLVMIV----------RQIPTGIWWMRIFILGALNISLFWSLLFISVYRL 151
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA 175
G + + V P++ VF+ + L + + ++ A+ + ++ L L + +A
Sbjct: 152 PGGVAATVGAVQPLMVVFISAALLGSPIRLMAVLGAICGTAGVALLVLTPNAALDPVGVA 211
Query: 176 VTW-----SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
A+ LA L V
Sbjct: 212 AGLAGAVSMAFGTVLTRKWQPPVPLLTFTAWQLAAGGLLLVPVALVFDPPIPMPTGTNVL 271
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + ++ GI R + + V ++ + +P ++ L Q + ++ I
Sbjct: 272 GLAWLGLIGAGLTYFLWFRGISRLEPTVVSLLGFLSPGTAVLLGWLFLDQTLSALQIIGV 331
Query: 291 GIVVIAMVVYLLPTVINSGKNKTKKS 316
+V+ ++ + + +KS
Sbjct: 332 LLVIGSIWLGQRSNRTPRARIACRKS 357
>gi|325274095|ref|ZP_08140236.1| hypothetical protein G1E_13152 [Pseudomonas sp. TJI-51]
gi|324100772|gb|EGB98477.1| hypothetical protein G1E_13152 [Pseudomonas sp. TJI-51]
Length = 294
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/284 (10%), Positives = 90/284 (31%), Gaps = 8/284 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + + +G+T ++ + S + ++ R +++ + G
Sbjct: 1 MNHRTALGALHIGALFFGLTGVFGKLAASASPVIIVFGRAAFAVLALALFASVTGPGWQR 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +G ++ + ++ A+ L + + P +V L + +
Sbjct: 61 LNGQDARRLLLGGVLLAGHWVSF-----FIAVKVGGVALATLGFASFPAFTVLLEGLLFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---FF 197
ER+ + + LL+ L L+++T + + + + + + G
Sbjct: 116 ERIRRNEALLVLLVSLGLVLVTPAFDLDSEATGGLLWALFSGLLFSLLSLTNRAGSGRLP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F+ + + + +F + K
Sbjct: 176 AVQAALWQNLVVSLSLLAFAAPGLGAVAPVDWLWIGLLGIFCTGVAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
T ++ P+ I + + + + ++++A+V+
Sbjct: 236 TAAVVFGMEPVYGIAVAWLVFAETPTVRMLLGGALIILAIVLSS 279
>gi|317009915|gb|ADU80495.1| membrane transport protein [Helicobacter pylori India7]
Length = 298
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 104/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITAGYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSTLISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGIHVPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ Q +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDQFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|317059338|ref|ZP_07923823.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313685014|gb|EFS21849.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 299
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 80/300 (26%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + +WG + ++ + + R S V I
Sbjct: 4 NQFLLGNGALLLTSFIWGSAFVAQVTGMDLIGPFTFSASRCFLSTLFVLALIFLQKE--- 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
KD K + + L + L TSF + V+ LG F
Sbjct: 61 --KDDTKMKDLLFGGIACGLFLFLGSSCQQVGLQYTTAGKTSFITSLYIVLVPLLGIFFK 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
K+ +N +A L + L ++ + + + + A
Sbjct: 119 KK-VNLFTWMAVFLGTVGLYLLAMSGLTEGANINKGDFFVFLGSFFWAGHILVIDYFTKK 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ A+ L + + G K
Sbjct: 178 VNPIKLSCLQFAVTTCLAAFVALSIETPTLPNIFASWKSIAYAGILSGGIAYTLQIVGQK 237
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ + ++ +L + + + I+ IA++V +P+ + K
Sbjct: 238 HTTNTTLASLILSLESVFGAIAGFIVLHERLKPSEILGCIIMFIAILVAQIPSDLFQKKK 297
>gi|261251435|ref|ZP_05944009.1| transporter Drug/Metabolite Exporter family [Vibrio orientalis CIP
102891]
gi|260938308|gb|EEX94296.1| transporter Drug/Metabolite Exporter family [Vibrio orientalis CIP
102891]
Length = 305
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 82/283 (28%), Gaps = 12/283 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L +L+ + P++ + Q +++ R SLP ++
Sbjct: 19 GILMALAGCVLFSVKPIFIKIAYQYGGDATSIMTLRAFSSLPVYLLIFLFLCRHRENRIK 78
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + LA I +L L F+ P V + +
Sbjct: 79 VQRYGVKAAAIGIMGYYLASFL--DIASLAHISAQLERLLIFLFPTFVVLISWGLYGSKP 136
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------WSAYCFARKTIPVGSSEG 195
+ +AL+ + + + H + ++ + A+ +G
Sbjct: 137 TRAVLSSALIGYVGIGFIVFHDFSAFGASVVSGSLLAITSALVFAFYLVWSKPLIGHLGS 196
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L +V S T+ ++ + + + R
Sbjct: 197 SMFTSIGMGSAGLAILVHLSLSDASPTDWSIELITIGILLGIFCTVLPSYLMAAAMARLS 256
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+T+ + P + V +V +L + I +VV ++
Sbjct: 257 PTTLSLTNNIGPAITAVFAVMVLDELFTIWHAIGLILVVASVY 299
>gi|229017095|ref|ZP_04174013.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1273]
gi|229023274|ref|ZP_04179784.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1272]
gi|228738068|gb|EEL88554.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1272]
gi|228744218|gb|EEL94302.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1273]
Length = 340
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 96/297 (32%), Gaps = 17/297 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L V LWG++ Q L Q VS +++ R+L S + + +
Sbjct: 23 NRLKGILMVIIGACLWGLSGTAAQQLFQSEKVSTEWLVTIRLLISGVILLIISSFGTSRK 82
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A M++F + + ++ + + ++ P+
Sbjct: 83 EIFGIWKQKSDAYKMILFGLFGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYLLFK 142
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPV 190
R + + I+ L ++ ++ + + ++ ++ A+ +
Sbjct: 143 WNVRPSKIDFISITLSLVGTFLLLTNGSVHNLAVSTPAIVWGILSGLSLAFYSLYSKELL 202
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY- 249
I + I + + + S E L + + +F
Sbjct: 203 ERWSSSVIVGWGMIIGGVGVTILHFISTNEFILLSTMKYVKLSTLPLIAFVVIFGTLIAF 262
Query: 250 -----GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V+I +++
Sbjct: 263 YLYLDSIRYLTPKETTLFGCTEPLAAIISSVVILHVPFQSFQILGAFCVIIMVLILS 319
>gi|229164637|ref|ZP_04292524.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
R309803]
gi|228618831|gb|EEK75770.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
R309803]
Length = 313
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 101/286 (35%), Gaps = 18/286 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE V ++ R+ ++ FS
Sbjct: 8 ICMLLMAVILWGAAIAPTKWALESVQPFTLLFIRLFFAGGICLL----FSFKQLKRSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE +
Sbjct: 64 KKVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKETIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIVLGVAGVLLITIPSSKVDQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMVETFYYGFPKVETWQGGLSVIYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S G+ PL+ IV+S+ +L + + I +V+ ++
Sbjct: 244 TVSASVSGLYLNALPLISIVASIVLLNESLTWRIVIGGSLVLFGVI 289
Score = 42.6 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 49/145 (33%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++
Sbjct: 1 MWGIMKEICMLLMAVILWGAAIAPTKWALESVQPFTLLFIRLFFAGGICLLFSFKQLKRS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKKVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKET 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPTVI 306
I I + V +++ +P+
Sbjct: 121 IQLNYWIGIVLGVAGVLLITIPSSK 145
>gi|205375142|ref|ZP_03227933.1| hypothetical protein Bcoam_19212 [Bacillus coahuilensis m4-4]
Length = 309
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/279 (10%), Positives = 80/279 (28%), Gaps = 5/279 (1%)
Query: 29 FVFCAYILWGITPLYTQFLEQVS-VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ LWG + + L + + R ++ + + + L +
Sbjct: 6 LLLLTSFLWGGNFIVGKTLVHYGDPVTLTVLRWAIAVISLIPVVWWKEKKLWPPMKAILP 65
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLT----RQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+G+ + + + S + + + S+ L
Sbjct: 66 LFLMGITGVALFQALQFMALEQTSATNVGLISTLNMFSIAACSYLFLKEKMNSLQFFSML 125
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L + +L L + P +A ++ + + +
Sbjct: 126 LSLVGVLLVLSKGDLQTILSLQFNPGDIFMVAAVLMWGIYSVCSKWAMKMVSPMMSILYS 185
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I L ++ + + L + F +++ G+K ST G+
Sbjct: 186 GIFGLVVMIPFAVNRFHIVTIDVPFLQAILYTGLISTVFCMVLWNVGVKHLGPSTSGLFL 245
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+ + + L + + ++ + IV+I V++
Sbjct: 246 NFNPIFTAMLAFLFLGEKMTVMQAVGSIIVIIGCVLFSF 284
>gi|34496590|ref|NP_900805.1| hypothetical protein CV_1135 [Chromobacterium violaceum ATCC 12472]
gi|34102444|gb|AAQ58810.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 287
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/279 (9%), Positives = 78/279 (27%), Gaps = 6/279 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A LW + +++ + L V+ R+ + + + +
Sbjct: 3 YLALTLAMFLWSSAFIVLKYVFQFYHPLAVLFARMAIATLCLLPLAMGGRIRWRYRQGDW 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A+G+ L + + + + FL ++
Sbjct: 63 PWLLAMGLCEPCLYFLFEANALMHTSASQAGVITATLPMMMAAGAAAFLHERQPRQVWLG 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + A +I LS+ L + C + + + + + +
Sbjct: 123 IALSFAGVIWLSMDSQAGPGAPNPLLGNALEFCAMVCASGYVLIAKRLSARYSPLALTGV 182
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDT-----LFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L W G + + L + + ++++ + R ++ G
Sbjct: 183 QTLAGCAWFGLAMLTPWGAWPDALLLVPSLWVLYLGAAITLGAYGLYTWAVSRIPVARAG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + + +L + + +V + +
Sbjct: 243 AFNNLIPVFTVAMAWLLLGETPQPWQGAAGALVFAGVWL 281
>gi|260768018|ref|ZP_05876952.1| protein of unknown function DUF6 transmembrane [Vibrio furnissii
CIP 102972]
gi|260616048|gb|EEX41233.1| protein of unknown function DUF6 transmembrane [Vibrio furnissii
CIP 102972]
Length = 302
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 93/297 (31%), Gaps = 17/297 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
K + + + + W + + + + L + R L + +
Sbjct: 9 KSSPKHTIWITLGLLALPPLFWAGNFIVGRSVRGDIPPLTLSFDRWLIASLILLPFTYKT 68
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + +++ S T +A L T P++ +
Sbjct: 69 LRREWRLYWQYRTR----IVIASITGVAAFNSLIYLGLQTTTASNALILNSFIPLLIMLF 124
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYC 182
GS+F K L+ Q + + + +L + + G ++ LA+
Sbjct: 125 GSLFFKLTLSAKQWLGMSISFVGVLSIISRGEWSNLTSLSFNQGDMVVFLAMVSWAIYTL 184
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
++ + G L + + G N + +
Sbjct: 185 VIQRMPKEMNRIGLMSVQMFLGLLVVLPFYLWEVHSGALPNWNNHTLLALAYVGIVPSVL 244
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +++ G++R + VG+ + P+ ++ S+ +L + + + ++ + +++
Sbjct: 245 AYLLYTAGVERLGPAKVGLSIHLIPVFGVLLSIALLGESLHLYQISGMALIFLGILL 301
>gi|259417774|ref|ZP_05741693.1| integral membrane protein [Silicibacter sp. TrichCH4B]
gi|259346680|gb|EEW58494.1| integral membrane protein [Silicibacter sp. TrichCH4B]
Length = 323
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/311 (14%), Positives = 103/311 (33%), Gaps = 24/311 (7%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAI 71
+ + + ++G L A + + I + +FL + +++ R + +L +F I
Sbjct: 2 HMMRISLINSNVLGILAAVGAAVSFSIIDVTFKFLSQGYPLYQMVFIRSVVALSLLFVII 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ GG +L+ + V + + F L F TP+I
Sbjct: 62 IPLEGGYKILRTQNIR-----LHVMRSLAVLFANISFFSGLAVLPLAEAIAISFATPLIV 116
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +FLKER+ + A ++ +L++ A+ + + +A I
Sbjct: 117 TLLSVLFLKERVGPWRWGAVMVGFSGILVIVKPGLDAFQPYALLPFFGSCGYATLHILTR 176
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFS------------------GGEHFFLGNIPDTLFL 233
+ G + P ++V + + + + +
Sbjct: 177 RAGGSDKAATLSFYPTFAFLVISALAGVVFGHGGWATGTPVLDVVLKPWAWPEGIEWAIF 236
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
G+ + + + + V EY A L +V V + + + + ++
Sbjct: 237 AVAGVSGAIGGYLVGQAYRMCEAGLVAPFEYVAMPLAVVWGVLVFAEWPEPSVWLGSALI 296
Query: 294 VIAMVVYLLPT 304
+ A +V L
Sbjct: 297 IGAGLVSLWRE 307
>gi|225376396|ref|ZP_03753617.1| hypothetical protein ROSEINA2194_02038 [Roseburia inulinivorans DSM
16841]
gi|225211772|gb|EEG94126.1| hypothetical protein ROSEINA2194_02038 [Roseburia inulinivorans DSM
16841]
Length = 302
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/289 (8%), Positives = 72/289 (24%), Gaps = 14/289 (4%)
Query: 33 AYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK-- 89
+WG+ + + ++ V R + + I
Sbjct: 15 TATIWGVAFVAQRVGMDYVGPFTFNVMRSIIGGVVLLPCIALLGKINGKGNTEAAKKMDG 74
Query: 90 -----AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +L + + ++ F + V+ LG K+ ++
Sbjct: 75 KERKTLFIGGIACGVLLCIASNLQQFGIMYTSVGKAGFITAMYIVVVPVLGIFLRKK-VS 133
Query: 145 HLQIIAALLIILSLLIMT-----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + L ++ L + + ++G +
Sbjct: 134 GKVWCGVGIAVAGLYLLCMKESGFSVQKGDFLLMLCALVFSLHILVIDYFSPKADGVKLS 193
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ V + L + + + G K +
Sbjct: 194 CIQFFTCGILSGVGMVLTEKPQLTSILAAWMPILYAGVMSCGVAYTLQIIGQKGMNPTVA 253
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ ++ +++ IL Q + I ++ A+++ LP
Sbjct: 254 SLILSLESVVSVIAGFLILHQTLSLRELIGCVLMFAAIILVQLPDRAKK 302
>gi|206972744|ref|ZP_03233676.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
AH1134]
gi|229181891|ref|ZP_04309198.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
172560W]
gi|206732329|gb|EDZ49519.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
AH1134]
gi|228601583|gb|EEK59097.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
172560W]
Length = 306
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 104/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 60 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 120 NYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 180 EVFTTLTLIIGAVILLPFALVEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 240 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGV 284
Score = 40.3 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 48/136 (35%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ + +P
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKQLQKSVVHKKVP 63
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S LK+ I I
Sbjct: 64 WKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRLNYWI 123
Query: 289 VFGIVVIAMVVYLLPT 304
+ I ++ +P+
Sbjct: 124 GIILGAIGVLFITIPS 139
>gi|89900922|ref|YP_523393.1| hypothetical protein Rfer_2138 [Rhodoferax ferrireducens T118]
gi|89345659|gb|ABD69862.1| protein of unknown function DUF6, transmembrane [Rhodoferax
ferrireducens T118]
Length = 280
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 8/283 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ ++W I + T+ LEQ EV R +++ + + F G +
Sbjct: 1 MVAVTLMWSIAGVVTRHLEQARSFEVTFWRSFFTVLSLLVILPLFLG----RGVFSRMRS 56
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
L S + + FF+ A+ + + P+ + +F+ R+ +
Sbjct: 57 GGSALWISGVCWSGMFTFFMLAITLTSVANVLITMALGPLFTALAARLFIGHRIALRTWV 116
Query: 150 AALLIILSLLIM----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
A ++ + M G L +L + ++G +++ +
Sbjct: 117 AIVVAGGGIAYMYGSQITQGGSLLGTLVALCVPISGAANWTVTQHSHAQGHDVDLIPAVL 176
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
F L + + + + K V ++
Sbjct: 177 IGAVLSSLVTLPMALPFQASAHDLVLLAGLGLVQLAIPCALAVLCTRVLKAPEVALLGLL 236
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I+ + + + +V+ A+ V L N
Sbjct: 237 EVIFGILLAWVGAGEVPGPNVLLGGTLVIGALAVNELIGWRNR 279
>gi|312960814|ref|ZP_07775319.1| protein of unknown function DUF6, transmembrane [Pseudomonas
fluorescens WH6]
gi|311284472|gb|EFQ63048.1| protein of unknown function DUF6, transmembrane [Pseudomonas
fluorescens WH6]
Length = 306
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 89/290 (30%), Gaps = 19/290 (6%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG T + ++L +S L S R + + + + L P+ +
Sbjct: 17 TMIWGGTFVAGRYLADQISPLLAASLRFILASLALLLFMAVARIRLVRPSV----PQLLQ 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ V + + F Y L S + P + KERL+ ++
Sbjct: 73 LTVLGFFGIFFYNLCFFYGLQYINASRASLIVALNPAVIGLASWWLFKERLSRAKVFGIA 132
Query: 153 LIILS---------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L + ++ L + + ++ + + +S G +
Sbjct: 133 LCLAGAATVIISRNPQLLATPGSGLGDLLIVGCVVAWGIYSLCSRGLNASLGPLQTVTWS 192
Query: 204 AIPALFYVVWNGFSGGEHF-----FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + G +G L L ++ + + GI+R +
Sbjct: 193 VLLGTLMLTATTTLTGSVTLQALAGIGLPQVLSLLYLGVLGSALAYIGYYDGIRRIGATR 252
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ PL ++ +L + + + I+++ + + P
Sbjct: 253 SGVFIALNPLTAVICGALLLGEQLTAPMLLGGVIILLGIFLCNKPLARAR 302
Score = 46.1 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 12/145 (8%), Positives = 39/145 (26%)
Query: 160 IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
++ + LA F + +L +++ +
Sbjct: 1 MLVTSDRLTYCKLAAVTMIWGGTFVAGRYLADQISPLLAASLRFILASLALLLFMAVARI 60
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
+ F F YG++ S ++ P ++ ++S ++ K
Sbjct: 61 RLVRPSVPQLLQLTVLGFFGIFFYNLCFFYGLQYINASRASLIVALNPAVIGLASWWLFK 120
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + + + ++
Sbjct: 121 ERLSRAKVFGIALCLAGAATVIISR 145
>gi|229177352|ref|ZP_04304735.1| Transporter, EamA [Bacillus cereus 172560W]
gi|228606075|gb|EEK63513.1| Transporter, EamA [Bacillus cereus 172560W]
Length = 320
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 92/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R L ++ + + + K + ++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWLIAIVCLLPMVWF-----KEKKILPPRTAILPLIF 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKINTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTVVVVTGCYLFS 302
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 37/101 (36%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + + + +++ + VG++
Sbjct: 57 WLIAIVCLLPMVWFKEKKILPPRTAILPLIFMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ I+T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKINTLQILSMILSFFGVILVLLKG 157
>gi|254486599|ref|ZP_05099804.1| Integral membrane protein DUF6 [Roseobacter sp. GAI101]
gi|214043468|gb|EEB84106.1| Integral membrane protein DUF6 [Roseobacter sp. GAI101]
Length = 301
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 87/300 (29%), Gaps = 6/300 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T + +F A +L+ + L ++L E+ ++R + L A+ +
Sbjct: 4 NKTTLAIIFSLIALLLFDMMGLIIKYLSPHYGAAELSAYRNVAGLIPAGIALWWSPEWHK 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ +L FF +L S + I V L + L
Sbjct: 64 NGRKLKIRQWQFALMR--GVVLTFAQFFFYLSLGLLSFATASTITYANAPIMVALAVLLL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
E++ L+ A L+ + ++++ P L +A A T +
Sbjct: 122 GEKVGVLRWGAVLMGFVGVIMVVGPGRDSFQPAALLPLAAAACYALVAVTTRMMDDDVPS 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + A + F L + D ++I G + +
Sbjct: 182 ALINLYSSAFAAVGSLGLAFFTVGFSPLHDATDVFWIIAMGGFGGTAVLFLVISYRMTEQ 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
S + Y + + ++V ++ + K+ +
Sbjct: 242 SNLAPFSYFGIPFAFGLGWLFYGEAPWSELFPGALLIVAGGLLIVWRERRQRVKDAMAAA 301
>gi|121635251|ref|YP_975496.1| hypothetical protein NMC1515 [Neisseria meningitidis FAM18]
gi|120866957|emb|CAM10717.1| conserved hypothetical integral membrane protein [Neisseria
meningitidis FAM18]
gi|325132721|gb|EGC55404.1| putative membrane protein [Neisseria meningitidis M6190]
gi|325134727|gb|EGC57366.1| putative membrane protein [Neisseria meningitidis M13399]
gi|325136741|gb|EGC59341.1| putative membrane protein [Neisseria meningitidis M0579]
gi|325138607|gb|EGC61166.1| putative membrane protein [Neisseria meningitidis ES14902]
gi|325142800|gb|EGC65172.1| putative membrane protein [Neisseria meningitidis 961-5945]
gi|325144847|gb|EGC67135.1| putative membrane protein [Neisseria meningitidis M01-240013]
gi|325198704|gb|ADY94160.1| putative membrane protein [Neisseria meningitidis G2136]
gi|325205672|gb|ADZ01125.1| putative membrane protein [Neisseria meningitidis M04-240196]
Length = 300
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 89/298 (29%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E C + + + ++ + + P ++L G+ + K
Sbjct: 175 LAGEPCWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQR 292
>gi|291300571|ref|YP_003511849.1| hypothetical protein Snas_3085 [Stackebrandtia nassauensis DSM
44728]
gi|290569791|gb|ADD42756.1| protein of unknown function DUF6 transmembrane [Stackebrandtia
nassauensis DSM 44728]
Length = 319
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 83/292 (28%), Gaps = 15/292 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L V + W + + +E+ S + R+L + + ++ GL
Sbjct: 23 ILAVSVTLLAWASAFVSIRVAVEEYSPGSMALGRMLVAAIFLLAFLLIKGEGLPPKSAWP 82
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ ++ + + + P++ LG LKE +
Sbjct: 83 G------IIFSGIFWFGLYMIVLNWGEQLVDAGTAAMIVNIGPILMALLGGWLLKEGMPP 136
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLS--------LAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L +++ L +A A + + ++
Sbjct: 137 RLFAGLGVSFLGAVLVGLSMSNGDEEGSTLGVLLCLLAAVCYAGGVVSQKPVLKTTSPLQ 196
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I A+ + + G + + + F + Y + R
Sbjct: 197 ATTFGAMIGAVACLPFAGQLVSDVATASLSATLNVVYLGVFPTAIAFTTWFYALARTTAG 256
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+G Y P ++++ S +L + + + + ++ + V +
Sbjct: 257 KMGATTYIVPAIVVIMSWLVLGEIPGLLAMLGGALCLVGVAVSRSRPRRKAK 308
>gi|77464458|ref|YP_353962.1| RhaT family transporter [Rhodobacter sphaeroides 2.4.1]
gi|332559347|ref|ZP_08413669.1| RhaT family transporter [Rhodobacter sphaeroides WS8N]
gi|77388876|gb|ABA80061.1| Putative transporter, RhaT family, DMT superfamily [Rhodobacter
sphaeroides 2.4.1]
gi|332277059|gb|EGJ22374.1| RhaT family transporter [Rhodobacter sphaeroides WS8N]
Length = 294
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 83/297 (27%), Gaps = 5/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T +G + ++ + ++ L E SVL V+ R + V +GG
Sbjct: 2 TEQNTRLGIGLMVLTTCIFALQDGISRHLAEHYSVLMVVMIRYWFFAAFVIAVAARQAGG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + V +LA + + + + P++ L
Sbjct: 62 L----APAIRSRFPVLQVLRGLLLAAEVCVMVVGFVKLGLVASHAVFICYPLLVAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E + + +A + +LI+ A+ +A FA +
Sbjct: 118 VLGETVGWRRWLAIGAGFVGILIILQPGLAVFSPWALVPLAAATLFATYALLTRYVARGD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V G H+ D ++ + + A+ S
Sbjct: 178 SAAVSFFWTGTVGAVAMTAVGLWHWEPMAPGDWFWMAALCCTAALGHWCLIRAYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V Y + F+ + + +VV A + L + + +
Sbjct: 238 AVQPFAYLQLPFAAMLGFFVFDERPGWNVVLGACVVVSAGLFTLWREQVRARARAGR 294
>gi|218768791|ref|YP_002343303.1| hypothetical protein NMA2041 [Neisseria meningitidis Z2491]
gi|121052799|emb|CAM09145.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
gi|325205510|gb|ADZ00963.1| integral membrane protein [Neisseria meningitidis M04-240196]
Length = 284
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/276 (10%), Positives = 80/276 (28%), Gaps = 3/276 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A G + +
Sbjct: 1 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHVGKIPREEWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + + V + A + L +
Sbjct: 61 LLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARAYHWICGA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L++ G L + + A + + F + +
Sbjct: 121 AAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPAFTSVSIA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + L + + + +++ G+ R + G++
Sbjct: 181 AASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGVGCSWYAYWLWNKGMSRVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P++ ++ +V IL + + V + +V+ A +V
Sbjct: 241 SLEPVVGVLLAVLILGEHLSPVSVLGVFVVIAATLV 276
>gi|241202819|ref|YP_002973915.1| hypothetical protein Rleg_0065 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856709|gb|ACS54376.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 307
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 78/283 (27%), Gaps = 5/283 (1%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + + +E + + +I+ R L + + + + L T + L
Sbjct: 25 WGSSYSFIKIGVETIPPITLIAARTLIAGGILLAVLRHRRVRLPRDLATWRRFFVQACLN 84
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ W ++ F + + + R + I
Sbjct: 85 SVVPFTLIAWAEQSVDAGLAVILNSATPIFTFLLTVLITRHEQVTLRRLFGVMAGLAGIC 144
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM----CVLAIPALFYV 211
L + + L L +A+ + C+A I + +G + +++ +
Sbjct: 145 LVIGVEALGGLGESLMAQLAIILATICYAGAAIFSKNFKGLDPAVPAAGSLISGAVVLLP 204
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ L + F I+ ++ Y + +
Sbjct: 205 MSLVVDRPWEIDPSPASMLALLALSAFSTALAFVIYFRLVQTLGSVGTTAQAYLRVPIGV 264
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ L + + I V+ + +P + + +
Sbjct: 265 AIGIVFLGERLSPTAWIGLVCVIAGVAAMTIPARRGTTQARNA 307
>gi|229137379|ref|ZP_04265991.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST26]
gi|228646078|gb|EEL02300.1| Transporter, drug/metabolite exporter [Bacillus cereus BDRD-ST26]
Length = 310
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 100/298 (33%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ +G + + LWG++ Q+L VS ++ ++ R+L + + ++
Sbjct: 3 MNNSRRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGLFILSFLLIKK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F+ PV+
Sbjct: 63 QNIFQIWKHSRHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ ++ +Q++A + + + + I + L A+ ++ Y
Sbjct: 121 AFGQRKFPASMQLLAIITALTGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPA 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + F + LI + + F +
Sbjct: 181 SLIKECGTTIVIGWGMLIGGIALLIFNRSFGWSQLSQTFTPKTFSMLILIIISGTLSFLL 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + I+ PL+ + S+ L + + + ++++++ +P
Sbjct: 241 YIGSLKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIILSVIFLTMPQ 298
>gi|152999482|ref|YP_001365163.1| transporter DMT superfamily protein [Shewanella baltica OS185]
gi|160874102|ref|YP_001553418.1| transporter DMT superfamily protein [Shewanella baltica OS195]
gi|151364100|gb|ABS07100.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS185]
gi|160859624|gb|ABX48158.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS195]
Length = 302
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/304 (19%), Positives = 124/304 (40%), Gaps = 5/304 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-- 71
+ ++ T +G A L+ + YT L+ +S E+ R+L++LP + I
Sbjct: 1 MDAMKSNPNTSLGVSLNVAASALFALMFAYTALLDTLSGEEIYGWRILFTLPLLTVFIGV 60
Query: 72 -VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
Y+S + + + ++ + S+ ++A+ F++A G S YF+ P+
Sbjct: 61 QGYWSQVIVIYQRIIREKHFWLTRIASSFLIAIQLWLFMWAPSNGYGLAVSLGYFIMPIT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G K++L+ +Q+IA L +L +L + S F +
Sbjct: 121 MVVVGRFAFKDKLSRMQLIACLFALLGVLNQLVISQTLAWPTLAICLGYPIYFWLRQKTD 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ G +L++P Y + +G E + P L + + +
Sbjct: 181 TNNIGGVWFDMMLSVPVSIYFILSGGYVIESLSHNSSPLWLAIGLGAISALALGLQSLSA 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
LS G++ Y PLL++V ++ L + I + + +A++V +L + K
Sbjct: 241 -PYLNLSLFGLLIYVEPLLLLVVAIM-LGETITPDEWPTYIGIWLAVIVLILEGGLRVIK 298
Query: 311 NKTK 314
+K
Sbjct: 299 SKNS 302
>gi|73748105|ref|YP_307344.1| hypothetical protein cbdb_A180 [Dehalococcoides sp. CBDB1]
gi|73659821|emb|CAI82428.1| conserved hypothetical membrane protein [Dehalococcoides sp. CBDB1]
Length = 297
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 84/290 (28%), Gaps = 12/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++T+ L + + S R+L + + L
Sbjct: 6 YLLLLLGVFGIAAASVFTR-LADAPPVIIASLRMLAATLLLLPFAA----RPVYLAIKCL 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +++ + ++ + F++ +L + PV+ + + +E+LN
Sbjct: 61 SRRNLLLIILAGFLVGMDQFFWVSSLEYTSIASSVILVTSHPVLVAIMSYIMWREQLNPK 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSEGFFIE 199
I L ++++ L + + + S +
Sbjct: 121 AIFGVLAAFGGMVLINLATTQVGEQAFLGNMLAMAATIPTTGYLIIGRQMRNSIDFLPYI 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A F + SG + + + + ++ V
Sbjct: 181 TLLYGSAAFFLLAGAFISGDSFGGYPGTTYLMIFLLAVVSQLVGHSSLNMALRLVPALVV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ I+ L + + + +V+ +++ +L
Sbjct: 241 SVAILGEPVGAIILGYLFLGEGLTFNEFLGGMLVLAGILIVMLNQPRTKK 290
>gi|288961842|ref|YP_003452152.1| hypothetical protein AZL_c03150 [Azospirillum sp. B510]
gi|288914122|dbj|BAI75608.1| hypothetical protein AZL_c03150 [Azospirillum sp. B510]
Length = 336
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 88/292 (30%), Gaps = 2/292 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + L+ + L+ + + V +++ +R ++LP + +++
Sbjct: 37 QSRSRSGVMLRVISAGLFVVMSLFVRLASAEAPVGQIVFYRSAFALPPIIAYLMWRRQFP 96
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S L+ L A ++ L P +FL
Sbjct: 97 SALRTRQPVGHLKRNLYGGAAMVLSFISLAYLPLALATALGFLAPLLAVPAAMLFLRERP 156
Query: 139 LKERLNH-LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L A ++++L+ + A A A + + +
Sbjct: 157 GAVAIGAALTGFAGVVLMLAPAFEGPALDHDTIIGVAAGLAMAVATAAGRVEIKALTATE 216
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ AL + S + ++L+G G+ + + RA +S
Sbjct: 217 APGTIAFYFALLCALGGLASAPFGWVTPGGLSLVWLVGAGMTGGLAHITMTEAMARASVS 276
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
T +YTA L ++ I + ++ + +V L
Sbjct: 277 TQAPFDYTAMLWALILDAAIFGLLPSPLSLAGACVIAASALVVPLADRFTGR 328
>gi|237808211|ref|YP_002892651.1| hypothetical protein Tola_1450 [Tolumonas auensis DSM 9187]
gi|237500472|gb|ACQ93065.1| protein of unknown function DUF6 transmembrane [Tolumonas auensis
DSM 9187]
Length = 300
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 97/287 (33%), Gaps = 15/287 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +LW + ++L + +++ R+L + F G LL+
Sbjct: 6 MLALTIAMLLWSSAFISLKYLLDFFHPTQIVFIRMLIASGCFLFF------GRKLLQFRY 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ +++ F AL P+++ + LKER+
Sbjct: 60 QAGDWRWLVIMGIAEPCLYFLFETSALQYTTAGQAGVITATLPLLASIAAFLVLKERIGK 119
Query: 146 LQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
QI+ ++ IL +++ SL ++ + S
Sbjct: 120 PQILGFVIAILGCTALSMAGQSDEQASNPLLGNSLEFMAMLCGAVYSISIRRLSSRYSVL 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ A + + + + ++ + ++++ I + +S
Sbjct: 180 VLTAFQAFVGSLFFGPLALQHAMPADVSLLQWGSLIYLATIVTIGAYWLYNWAISKVAVS 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P+ ++ + ++L + ++ + + G V I +V+ LP
Sbjct: 240 LATAYINLIPVFTLLLAFWLLNERLNFWQCVACGAVFIGVVISQLPE 286
>gi|157413285|ref|YP_001484151.1| integral membrane protein [Prochlorococcus marinus str. MIT 9215]
gi|157387860|gb|ABV50565.1| Integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9215]
Length = 296
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 101/286 (35%), Gaps = 15/286 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + L + +++ + + E++ R L SL F I LK+
Sbjct: 19 LVFASFFFSLMTLCVKNIDKRIPIYELVLFRSLLSLIITLFII--------KLKNINPWG 70
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K +L + + YA+ +++ + P+ +F+ E++ I
Sbjct: 71 KNRPLLFLRGVLGTLALVCIFYAIRNMPLSISTVIQYTYPIFISIFAGIFINEKITRNII 130
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ ++ + +LI+ + + +++ + A C A I V +
Sbjct: 131 FSLIIGWIGILIILNPTQLSNINVELENNSISIAFLGAICTALAYITVKKLSFTEDVYVI 190
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L + + ++ N + +++IG GL + G+K S +
Sbjct: 191 IEYFPLVSFITLFPTVLINWVTPNWNELVWIIGIGLFTQLGQTFLTIGLKNLPASEASTI 250
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y L + + + I+ + +V++ ++ V +
Sbjct: 251 NYLQVLFGSIWGILFFSEIINIKFLLGASLVLLGTIISTTKIVKRA 296
>gi|134045939|ref|YP_001097425.1| hypothetical protein MmarC5_0904 [Methanococcus maripaludis C5]
gi|132663564|gb|ABO35210.1| protein of unknown function DUF6, transmembrane [Methanococcus
maripaludis C5]
Length = 296
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 95/292 (32%), Gaps = 21/292 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L +F I WGI+ + T+ L + + + R + + I
Sbjct: 2 NDRSLGILLMFLTVIFWGISFVATKIILVYIPPITLGFIRFAIAAMILIVLI-------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +++ + ++ F AL + P+ + + +
Sbjct: 54 RNFPSYSKKDFLNLVLAGFLGITSYFLFENVALEYTTATNAALIAATVPIFYLMVSDLVE 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--- 196
+ + +Q +L+ + + I+ L+ + L I + +
Sbjct: 114 RRIPSKIQYFGSLIGLFGVSILILNGRLILELNPIGDLLMIGAVLSWVLYTFVIQKLEKH 173
Query: 197 ---------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ +L++P + + FL L ++ + +
Sbjct: 174 DNLTVTRDITLIGVLLSVPFMLLEFGSKGVLDLGVFLNPPLTFAVLYLAIFCSAIAYLFW 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I+ A ST Y P++ +++ ILK + TI +V+ + +
Sbjct: 234 NMSIRLAGASTTNNGIYFIPIVAMIADSIILKNIPNIYATIGAVLVLFGVYI 285
>gi|30021301|ref|NP_832932.1| drug/metabolite exporter family protein [Bacillus cereus ATCC
14579]
gi|229128475|ref|ZP_04257454.1| Permease, drug/metabolite exporter [Bacillus cereus BDRD-Cer4]
gi|29896855|gb|AAP10133.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
gi|228654978|gb|EEL10837.1| Permease, drug/metabolite exporter [Bacillus cereus BDRD-Cer4]
Length = 289
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 97/293 (33%), Gaps = 13/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + WG + L+ + LE V +++ R + +
Sbjct: 1 MKPIKANLMILLVTMTWGTSYLFMKIGLETVPSFSLVALRFGIAFFVCAAVFFKQFRSIH 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +L V I L T F +T + L V
Sbjct: 61 FVTLKYG--------FILGFLLFVVSASVILGLKTTSASNAGFLASLTVIFIPLLSIVLF 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEG 195
K+RL++ II++L+ + + ++TL++ + L S +A + A+ +
Sbjct: 113 KDRLSYRLIISSLVAMTGIGLLTLNNQLTLNSGDLLCILAALFYAFHIIVTGRAAKVANT 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L F V+ L+ ++F + I + K
Sbjct: 173 LQLGILQLGFAGGFGVLSALIFEEPQLPSTKESWIAVLVLSIFCSAFAYIIQAMAQKYTT 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ G++ P+ + + + + + I +++ +++ + S
Sbjct: 233 PTHTGLIFSLEPVFSALFAYLFMNEVLSLKGYIGALLILSGVILAEIKVKRKS 285
>gi|119718266|ref|YP_925231.1| hypothetical protein Noca_4047 [Nocardioides sp. JS614]
gi|119538927|gb|ABL83544.1| protein of unknown function DUF6, transmembrane [Nocardioides sp.
JS614]
Length = 312
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 82/284 (28%), Gaps = 14/284 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ V + W + + L + S + R+L + + +
Sbjct: 19 WLPVAAVAVTLVFWASAFVAIRHLGQDFSPGALSLGRLLVGTLCLGAVALSRGMPRPTGR 78
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + ++ V+ + ++PV+ FL + FL ER
Sbjct: 79 EWMS------IVAIGVLWFGVYNVALNEGEHRVDAGTAAMLIQISPVLIAFLAAAFLDER 132
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK-------TIPVGSSEG 195
+ L + +++L + S + V A V
Sbjct: 133 FTLYLGVGLALAFSGVGLISLATSEGGGSDVVGVLLCLVSAAVYSVSLILQKPLVARLSA 192
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + A+ + + G E + F ++Y ++
Sbjct: 193 LHVTWLACTVGAVVCLPFLGQLLDEAGDAPTSSILWVAYLGVFPTAIAFTTYAYALRHMS 252
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S++G+ Y P + I V L + + + + ++ + V
Sbjct: 253 ASSLGVTTYLVPPITIAMGVVFLDEAPPAMAYVGGALALVGVAV 296
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 21/82 (25%)
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ L + G R T ++ +P+L+ + L +
Sbjct: 72 MPRPTGREWMSIVAIGVLWFGVYNVALNEGEHRVDAGTAAMLIQISPVLIAFLAAAFLDE 131
Query: 281 PIDTVRTIVFGIVVIAMVVYLL 302
+ + + + L
Sbjct: 132 RFTLYLGVGLALAFSGVGLISL 153
>gi|323699353|ref|ZP_08111265.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
ND132]
gi|323459285|gb|EGB15150.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans ND132]
Length = 294
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 89/286 (31%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + +LWG T + + L Q V + R + + + G L+
Sbjct: 9 YVLLVVSMMLWGGTWVAGRVLAQSVHPMTAALLRFGLASIILLYMCRRAEGRWPRLRRDQ 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + AT + + FF L + + TPV + ++F ER
Sbjct: 69 ILP----VTFLGATGVFAYSYFFFTGLQSIPAGRAALIVACTPVCIALISALFCGERFGP 124
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L+I+ AL+ ++ + ++ G ++ +A + R +
Sbjct: 125 LRILGALVSLVGVSVVIADGNPLALLSGGVSRGDFMILGCVASWTAYTMGGRAVMKRLPP 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L + + + + L + + + I
Sbjct: 185 LSSVAWSSFTGTLMLLPAALAQGLIADLGRVRPVDWGCVVFLGFLATALAYYWYYRAISV 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S GI P +++ +L +P+ + +V+ + +
Sbjct: 245 IGASRAGIFINMVPAFAVLTGFLVLGEPVHLSLGVGGAMVITGVYL 290
>gi|254505917|ref|ZP_05118062.1| integral membrane protein, DUF6 [Vibrio parahaemolyticus 16]
gi|219551140|gb|EED28120.1| integral membrane protein, DUF6 [Vibrio parahaemolyticus 16]
Length = 306
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 12/292 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYF 74
A+ T +G L IL+ + P+ + Q +++ R SLP Y
Sbjct: 10 STAASATQIGILLALAGCILFSLKPVLIKIAYQAGGDATSIMALRAFSSLPLYIAMFFYL 69
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ +V I +L L F+ P V +
Sbjct: 70 --CRRADNRNKVRDHGLKAVVIGILGYYCASYLDIASLAFISAQLERLLIFLFPTFVVLI 127
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARK 186
K+ +++AL+ L + + +H L + A+
Sbjct: 128 SWALYKQIPTKQVMLSALIGYLGIAFIFIHDFQLLGKSIVKGSLLAMASALVFAFYLVWS 187
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + ++ SG + ++ +
Sbjct: 188 KPLISHLGSALFTSIGMGSAGCAILLHLLSSGAHITQWSQELIVIGVLLGIFCTVLPSYL 247
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + R + + + P + +++VF+L + I +VV ++V
Sbjct: 248 IAAAMARLSPTQLSLTSNIGPAITAIAAVFLLGETFTLWHAIGMTLVVFSVV 299
>gi|123441640|ref|YP_001005625.1| putative inner membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088601|emb|CAL11396.1| putative inner membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 347
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 91/308 (29%), Gaps = 35/308 (11%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G + + +L G T + + L + + R + ++ +
Sbjct: 25 KRQGYVLALISAMLLGFTGIIIRILTAHYHLPTSVLAFWRAGLVAAVLLPILLVIKPEWA 84
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ +LAV G + ++ +++ + + +VFLG +F
Sbjct: 85 KLRRDQVKFYLAY-----GLLLAVFNGLWTESVALNGASISTILVYCSVGFTVFLGWIFY 139
Query: 140 KERLNHLQIIAALLIILSLL------------------IMTLHSGIPLLSLAIAVTWSAY 181
E + + ++ ++ + L SGI +A +
Sbjct: 140 NEYMGWREFFVIVISMVGCFLVSDGVNITAADFNFVGLFIGLASGIGYSFYTLAGRIATD 199
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL---------GNIPDTLF 232
+ G ++ L + G L
Sbjct: 200 RRYPVWNTILYVFGLSAVYQLIFNQLLLWFPIQGLQQMVGNLFFLSIGTEGVQWSGWWLL 259
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
LI F +F+ +K L+ ++ + V + F+L + + + + +
Sbjct: 260 LILAAGPTLLGFGLFNLSLKTLPLAIASLILTLELVFTAVIAYFLLDEILSASQLLGSAL 319
Query: 293 VVIAMVVY 300
V++ +++
Sbjct: 320 VLLGVLML 327
>gi|150396792|ref|YP_001327259.1| hypothetical protein Smed_1583 [Sinorhizobium medicae WSM419]
gi|150028307|gb|ABR60424.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 302
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 85/300 (28%), Gaps = 9/300 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G +F+ A I + + + ++ +++ R L + V
Sbjct: 3 SSANFRGIVFMCLAMIGFACNDALVKSVTGAMNTGQIMFMRGLLTTLMVVVIAYRLGAFR 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +I AL S P+ ++F
Sbjct: 63 PIRTILRPAILLRIAME------ALASVTYISALGQIPLANASAIMQALPLAVTLGAALF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--F 196
L E + + A ++ +LI+ A+ V +C A + +
Sbjct: 117 LGEPVGWRRWAAIVVGFAGVLIVLRPGPEGFTVAALTVVACVFCTATRDLCTRRIGTDVP 176
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + V V + + + G +L + ++ ++
Sbjct: 177 SLYITVTTSFVTTLVGAALIVPLGGWQPMSATSLSHIAGASVLLMLGYQTIVLAMREGEI 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
S + Y + L + V + D I++ + + + +++
Sbjct: 237 SVIAPFRYMSLLWSVTLGVVFFAETPDRWMLAGVAIIIGSGLYTFYRESKRGRRAVAQRA 296
>gi|68249259|ref|YP_248371.1| hypothetical protein NTHI0802 [Haemophilus influenzae 86-028NP]
gi|68057458|gb|AAX87711.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 292
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 59/289 (20%), Positives = 123/289 (42%), Gaps = 8/289 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A L+G ++ L+ +S ++ +R++++ P V ++ F + L
Sbjct: 3 KGILVSLLASFLFGYMYYFSTLLKPLSGTDIFGYRMIFTFPFVLLSVTLFKQKAALIERL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K K P + ++ F++A SF Y + P++ V G VF KE
Sbjct: 63 KRIQKRPHLALSYLLCGLLMGFQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRVFFKE 122
Query: 142 RLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R++ + IA ++ L ++ + L G+ ++ I + ++AY RK + F +EM
Sbjct: 123 RISTFKFIAVIIATLGVISNIVLKGGLSWEAIVICLGYTAYFSIRKALKNTDLASFCLEM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++++ + N L+ GL++ + ++ +G
Sbjct: 183 LSLMPVSIYFA---LQTDFATVQQTNPFIWGLLVLLGLISGTALIAYVIASNMLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ Y ++M+ S I + ID+ +F +VIAM++ ++ V
Sbjct: 240 LLGYVETIMMLCVSFLI-GEQIDSGSYPLFICLVIAMILVMVDGVYKQH 287
>gi|330502004|ref|YP_004378873.1| hypothetical protein MDS_1090 [Pseudomonas mendocina NK-01]
gi|328916290|gb|AEB57121.1| hypothetical protein MDS_1090 [Pseudomonas mendocina NK-01]
Length = 304
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/301 (9%), Positives = 79/301 (26%), Gaps = 20/301 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + + A + W L + F +++ + R +L + +
Sbjct: 5 NHSRPLALFGLLLANLCWSGNALVARAFAGEIAPFTLSFWRWCLALALLLPFVA----MP 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +LV +A + A T S P+++ +
Sbjct: 61 LWRHRSEVCHAGWRLLVLGGLGIAGYNSLLYSAAQTTAAINISLVNTCLPLVTFIGAGLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP---------------LLSLAIAVTWSAYCF 183
L E L+ + L ++ L + A+
Sbjct: 121 LNEWPARRAWWGMLVAVAGLAVLISQGQWSRLASLSFNQGDLIMLLAVVDWALYSLLLRR 180
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + +P + S G H L + +
Sbjct: 181 WSAYLQPIPPLALLGVFILFGVPLILPFYLYELSQGTHLTLNAANLSAIAYTAVFASLLA 240
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +++GI+ + + Y P+ +L + + + ++ +++ P
Sbjct: 241 YLAWNHGIRVIGAAKAALTNYVMPVFTAFLGWVLLNESLQLYHWLGAAMIFGGLLLATRP 300
Query: 304 T 304
Sbjct: 301 G 301
>gi|294628226|ref|ZP_06706786.1| integral membrane protein [Streptomyces sp. e14]
gi|292831559|gb|EFF89908.1| integral membrane protein [Streptomyces sp. e14]
Length = 334
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/295 (8%), Positives = 70/295 (23%), Gaps = 29/295 (9%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + +G + + + L + L V+ RV + + V
Sbjct: 16 GLGLALVSALAFGGSGVAAKPLIEAGLDPLHVVWLRVTGAALVMLPLAVRHRALPRTRPA 75
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ F +A + AL + ++ P + + + +
Sbjct: 76 L--------LAGFGLLAVAGVQACYFAALSRIPVGVALLVEYLAPALVLGWVRFVQRRPV 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-------- 195
+ +L L + + + V S EG
Sbjct: 128 TRAAALGVVLAAGGLACVVEVWSGLSFDALGLLLALGAACCQVGYFVLSDEGGDAGDRAP 187
Query: 196 -----------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + L L + +
Sbjct: 188 DPLGVIAYGLLVGAAVLTVVARPWGMHWSVLAHTARMNGTPVPAVVLLLWIVLVATVLAY 247
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R G++ ++ V + +L + + + +V++ +
Sbjct: 248 VTGVVSVRRLSPQVAGVVACLEAVIATVLAWVLLGEHLSAPQIAGGAVVLLGAFI 302
>gi|293604043|ref|ZP_06686454.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817525|gb|EFF76595.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 297
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 82/286 (28%), Gaps = 15/286 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G +F ++W + + + + + + ++ R + +F + L
Sbjct: 10 RAGLALMFSTIVVWAGSWIAMKLIVPYIGPFDFVALRYVTGSVVLFALAIATRRPLG--- 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
P L+ T A GF AL++ S + P V L ER
Sbjct: 67 ----MPPWKLTLLIGLTQTAGFQGFVQTALVSGGVGKVSLMAYTMPFWVVLFAWWLLGER 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA-------RKTIPVGSSEG 195
+ + L + L+ + + + ++ + +
Sbjct: 123 PSVKHAVGIGLAAIGLICFVEPWNGLGDIRPVLLGLGSGLCWGVGTVLSKRMFERHAPDV 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L V G T + + + ++ ++R
Sbjct: 183 MTFTAWQMLLGGLVMVPVAYLVPQITAQWGWQLWTGMTYIVLIATAAGWLLWLQVVRRVP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S G+ P++ ++ + +L + +++ + V
Sbjct: 243 ASIAGLSSLGVPVVAMLLAWVMLSERPSLGELGGMVLILAGIFVVS 288
>gi|206974415|ref|ZP_03235332.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217958007|ref|YP_002336551.1| transporter, EamA family [Bacillus cereus AH187]
gi|229137272|ref|ZP_04265888.1| Transporter, EamA [Bacillus cereus BDRD-ST26]
gi|206747655|gb|EDZ59045.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217065841|gb|ACJ80091.1| transporter, EamA family [Bacillus cereus AH187]
gi|228646175|gb|EEL02393.1| Transporter, EamA [Bacillus cereus BDRD-ST26]
Length = 330
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/306 (16%), Positives = 101/306 (33%), Gaps = 23/306 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 28 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKALGKD 87
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 88 MSFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 142
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L IA +Y
Sbjct: 143 LYKDDALNMKKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLIAAMLYSYGNILAKE 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G G F +I L LI L++ FCI++
Sbjct: 203 GSKTLDVGYMTAYQMIFGSIGLLCIGGLQVGVMPFTFSIHAILMLIYLSFLSAAGFCIWN 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 263 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 322
Query: 309 GKNKTK 314
+ + +
Sbjct: 323 MEQEKQ 328
>gi|197120295|ref|YP_002140722.1| membrane protein [Geobacter bemidjiensis Bem]
gi|197089655|gb|ACH40926.1| membrane protein, putative [Geobacter bemidjiensis Bem]
Length = 306
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/306 (11%), Positives = 87/306 (28%), Gaps = 2/306 (0%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWS 63
T E + + E+++ G L V A +LWG + VS + + R+L
Sbjct: 2 ETGSETAAPTAAESSAGGVRAGALLVLAAGVLWGTSGTSQALAPAGVSPWSLGALRLLVG 61
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ G + A + A+ T +S
Sbjct: 62 GAALMLLAFMRGGLGTGRWPFRATFLAGAFVASYQLSFFTAVSRTGVAVGTLVAIGSSPV 121
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF 183
+ + L IA +++ + + + LA+ S C+
Sbjct: 122 LAGVLGLVFRKERPGRAWGVATLLAIAGCGLLVGG-GGAIAVDVVGIMLALGAGLSYACY 180
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ M V+ + F + + + ++ +
Sbjct: 181 TMSIKVLLPGRSSEAVMAVVFSLGALLLSPLLFVSNLKWLAQPSGMAVVVYLGVVVTALS 240
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +F+ G++ +++ + PL+ + + L + + + ++ + V
Sbjct: 241 YWLFARGLRSVPVASAVTLSLAEPLVAALLGILFLGERLTPLALCGIPLLFAGLAVLAAS 300
Query: 304 TVINSG 309
Sbjct: 301 MSGKGR 306
>gi|86359898|ref|YP_471788.1| hypothetical protein RHE_PB00017 [Rhizobium etli CFN 42]
gi|86284000|gb|ABC93061.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 301
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/290 (9%), Positives = 81/290 (27%), Gaps = 14/290 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++ + + W + + + L ++ +E+ + R + + + +
Sbjct: 19 LIAFAAIVVTILFWASSFVVIRICLGPLTPIELATARYVAAGVLALVYLAIYRPMPE--- 75
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + V + +A + T SF PV + + + L ER
Sbjct: 76 ----KRDFLRLSVAAILFIAAYAVLLNTGEQTVAAGPASFIINTMPVFTALIATFALGER 131
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGF 196
+ + ++ L S A SA + +
Sbjct: 132 FGRWGWAGTAVSFGGVALIALSSDGGFKLDPNAVLILGAALCSAISSVLQKPLLARLPAL 191
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +L I ++ + + + + + ++ +KR
Sbjct: 192 AVTAWILLIGSVPLLPAVPSTISALAAAPAEVNWGVAYLVIFPTAIGYLTWAIALKRLTA 251
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y P + + L + + + + ++ ++V +
Sbjct: 252 ARASNFLYGVPPVATLIGFGWLGETPTALGAMGGVMAILGVLVVNVMRKR 301
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 13/141 (9%), Positives = 34/141 (24%)
Query: 164 HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF 223
G L++ A V + + + A V+ +
Sbjct: 14 QGGFDLIAFAAIVVTILFWASSFVVIRICLGPLTPIELATARYVAAGVLALVYLAIYRPM 73
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ L + + + G + + T P+ + + F L +
Sbjct: 74 PEKRDFLRLSVAAILFIAAYAVLLNTGEQTVAAGPASFIINTMPVFTALIATFALGERFG 133
Query: 284 TVRTIVFGIVVIAMVVYLLPT 304
+ + + L +
Sbjct: 134 RWGWAGTAVSFGGVALIALSS 154
>gi|124268238|ref|YP_001022242.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
gi|124261013|gb|ABM96007.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
Length = 302
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 84/287 (29%), Gaps = 16/287 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G I + + + L + + V+ R+L++LP + S G L
Sbjct: 16 GLALAMAGAIAFSGKAIVAKLLYRHGLDAVTVLFFRMLFALPLFLAMAWWVSRGRRPLTA 75
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + T + L L ++ P + + G + R+
Sbjct: 76 HDRRMVLLL----GVTGYYLASFLDFLGLQYISASLERLILYLNPTLVLAFGVLLFGRRV 131
Query: 144 NHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
Q +A + L +L++ H G L+ + ++ + + S
Sbjct: 132 TRPQALAIGVSYLGVLLVFGHEVGFQGPDVVLGALLVFASAVSYAVYLVYSGELVQRLGS 191
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+A + S + L L+ + + I+R
Sbjct: 192 MRLVGLASTVACALCIAQFFVLRSPAVALAVPEPALWLSLLNATVCTVAPVLMVMMAIER 251
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P+ ++ + IL +P +V++ + +
Sbjct: 252 IGPTLAAQTGMVGPMSTLLMGIVILGEPFTAWVAAGTALVLVGIWLL 298
>gi|229159904|ref|ZP_04287911.1| Transporter, EamA [Bacillus cereus R309803]
gi|228623643|gb|EEK80462.1| Transporter, EamA [Bacillus cereus R309803]
Length = 320
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 94/275 (34%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL +A ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMMAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + F L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFFFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 36.8 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|149203860|ref|ZP_01880829.1| hypothetical protein RTM1035_07328 [Roseovarius sp. TM1035]
gi|149142977|gb|EDM31019.1| hypothetical protein RTM1035_07328 [Roseovarius sp. TM1035]
Length = 295
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 99/299 (33%), Gaps = 9/299 (3%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAI 71
L+ + T+ L++ A + + + + ++ E++ +R + V
Sbjct: 2 SLAAPAPAPQTLRAGLWMLGAVASFSSMAVAGRAVSFELDTFEIMMYRSIVGFILVLSVA 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
++ + + F+ L + YA+ F P+
Sbjct: 62 RLTGQIATVTTRSPGTHLVRNLCHFTGQNL------WFYAITVIPLAQVFALEFTAPLWV 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ L + L ERL + +AA++ +LI+ S + IA +A FA +
Sbjct: 116 LILSPLVLGERLTGTRALAAVIGFAGILIVARPSPETINLGTIAAAAAAIGFAGSILMTK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL--GNIPDTLFLIGYGLLNSFVFCIFSY 249
C+L L + + G + ++ +L+ G +
Sbjct: 176 RLTRTESLTCILFWMTLLQIGFGLACAGYDGDIALPSLTSAPWLVLIGCAGLLAHFCLTT 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ A + V +++ ++ + + + + +D + ++ A + L S
Sbjct: 236 ALSLAPATLVTPVDFLRLPVIAIVGLLVYGEAVDVFVLVGAAVIFGANYLNLWRETRKS 294
>gi|322374560|ref|ZP_08049074.1| membrane protein [Streptococcus sp. C300]
gi|321280060|gb|EFX57099.1| membrane protein [Streptococcus sp. C300]
Length = 301
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 102/301 (33%), Gaps = 10/301 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GTL+ A I WG++ Q+L +S L + + R++ + + F S
Sbjct: 2 SKTVKGTLYTVVAGIAWGLSGTSGQYLMAHGISALALTNLRLIIAGLALVFLSYTTSKD- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 61 KFLSFLKDKKSLLSLLLFAVFGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILVYTCMK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K +II+ L I ++ H L + + + I +
Sbjct: 121 DKVAPTLAEIISIGLAIGGTFLIATHGKVDQLSVTPLGLFWGLFSALTYALYIILPIVLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + + + F + F + F G
Sbjct: 181 KKWGSILVIGVGMVISGVVAIPFTGVLQASIPTSLDFLFAFAGIIIIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+K+ + I ++++A+ + L ++ K+
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMKEQFYAIDFIGMAMILLAVTIISLKDLLLEIKS 300
Query: 312 K 312
K
Sbjct: 301 K 301
>gi|326780255|ref|ZP_08239520.1| protein of unknown function DUF6 transmembrane [Streptomyces cf.
griseus XylebKG-1]
gi|326660588|gb|EGE45434.1| protein of unknown function DUF6 transmembrane [Streptomyces cf.
griseus XylebKG-1]
Length = 326
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/285 (10%), Positives = 82/285 (28%), Gaps = 14/285 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ T +LW + + E S + R++ + ++ GL
Sbjct: 16 RLRATAAACTTVVLWASAFVSIRSAGESYSPGALALGRLVTGALVLGAILLVRREGLPGR 75
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ ++ + + + P++ +G+ L E
Sbjct: 76 GAWRG------IITSGVLWFGLYMVALNWGEQEVDAGTAAMLVNIGPILMALMGARLLGE 129
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSE 194
L ++ + +++ L S +A A + +
Sbjct: 130 GLPRRLLLGMGISFSGAVVVGLAMSGHGTSSVLGVALCLLAAVAYALGVVSQKPALAHGS 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I AI A+ + + G E + + F + Y + R
Sbjct: 190 SLQINTFGCAIGAVACLPFTGVLVSEAADAPLSATLNMIYLGVFPTALAFTTWGYALART 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+G Y P ++++ + +L + + + + ++ + V
Sbjct: 250 TAGRMGATTYAVPAIVVLMAWVLLDEVPTPLGVLGGVLCLVGVAV 294
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 25/79 (31%)
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
G + L ++G + T ++ P+LM + +L + +
Sbjct: 73 PGRGAWRGIITSGVLWFGLYMVALNWGEQEVDAGTAAMLVNIGPILMALMGARLLGEGLP 132
Query: 284 TVRTIVFGIVVIAMVVYLL 302
+ GI VV L
Sbjct: 133 RRLLLGMGISFSGAVVVGL 151
>gi|196044955|ref|ZP_03112189.1| putative membrane protein [Bacillus cereus 03BB108]
gi|196024443|gb|EDX63116.1| putative membrane protein [Bacillus cereus 03BB108]
Length = 309
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 89/297 (29%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + L ++ + + R + + + S L
Sbjct: 8 YVIMLFVPLFWGGSFATAEHVLTEIPPITAATIRFGLAGCILIGIVF----MKSEWNTGL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGISLILSLIGVIVVITSGSLDTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 244 LGASKASMYLNLTPIVATSISVVLYGAAVTWQQIAGMIIVLIGVYISTVKSNKDIKK 300
>gi|83951170|ref|ZP_00959903.1| membrane protein, putative [Roseovarius nubinhibens ISM]
gi|83839069|gb|EAP78365.1| membrane protein, putative [Roseovarius nubinhibens ISM]
Length = 323
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/315 (13%), Positives = 97/315 (30%), Gaps = 25/315 (7%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIV 72
++ + S + G L A + + + + +FL L +++ +R L + I+
Sbjct: 1 MTSASISNSNLKGALCATVAAMCFSLNDVGIKFLSDTYALHQIVFYRSLIGILTFALIIM 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
SGGL ++ L + + F L + +FV+P++
Sbjct: 61 PISGGLKTMRTRLLHWHLAR-----GLCVVAANSFLFLGLASLPIADAVAIFFVSPLVIA 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+FL E + + A + +L +LIM AI SA +A I
Sbjct: 116 VFSVIFLGEHVGPRRWAAIAIGLLGVLIMVKPGTSAFQIAAILPAISAALYALMHIIARR 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGF-------------------SGGEHFFLGNIPDTLFL 233
G + + ++ + + + D
Sbjct: 176 IGGTESAGTMTFWILISFMTVSATVGLAIGDGRFASDAPEVLTFLLRAWAPLDPADIPIF 235
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ G + S + A+ + EY + + ++ V + + ++
Sbjct: 236 VMLGTSGIIGGFLISQAYRIAEAAFAAPFEYVSMPMAVIWGVVVFGTFPGVSTWVGIALI 295
Query: 294 VIAMVVYLLPTVINS 308
+ + + +
Sbjct: 296 LGSGLAMIYLETRRR 310
>gi|317495613|ref|ZP_07953980.1| integral membrane protein [Gemella moribillum M424]
gi|316914232|gb|EFV35711.1| integral membrane protein [Gemella moribillum M424]
Length = 295
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/289 (16%), Positives = 97/289 (33%), Gaps = 11/289 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS---VLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L WG++ + ++L +S VIS R+ +S + +++ + SLL
Sbjct: 8 KGALLTILGATCWGLSGVLGEYLLNISKLDSKWVISTRLFYSGLILVLILLFKNKD-SLL 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + ++ FS L + G + A+ + + F PV+ + K
Sbjct: 67 KVFSDKKDILSLMNFSFLGLLICQGTYFLAIKYTNAGMATVIQFTGPVMIMVYYCFVNKR 126
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVGSSE 194
+++A L + +++M H L I + +I + +
Sbjct: 127 LPMPREVVAILASLFGVVLMATHLDFSKLNISTLGLFWGIFSAVGLASYNISSIRLTTKY 186
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G M + A V S L + + F ++ G++
Sbjct: 187 GVMPIMAWGLLIAGVVVYVGTGSFYIPENLSFLDFLCMSGVILIGTIASFSLYLEGVRLI 246
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I+ P+ IV S +L + + ++ A+VV
Sbjct: 247 GAVMGSIIGCFEPIAAIVFSFLLLGTTFGALDLLGAMAILSAVVVLTRR 295
>gi|294853613|ref|ZP_06794285.1| hypothetical protein BAZG_02589 [Brucella sp. NVSL 07-0026]
gi|294819268|gb|EFG36268.1| hypothetical protein BAZG_02589 [Brucella sp. NVSL 07-0026]
Length = 358
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 93/299 (31%), Gaps = 19/299 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G F+ + ++ + ++L + R +FF I+ G +
Sbjct: 12 HVKGMGFMVLSVLMLPLMDAIGKWLAMMDDLPPATATFMRFFVQCWLMFFIILVVGGLRA 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L L + ++ F A+ +F P+I ++FL
Sbjct: 72 LATSHL------MGNLLRGELMGFGGLCFFTAVKYMPLADAMAVFFAEPLILTLFSALFL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE++ + A + ++ +I+ S +++ +A FA I
Sbjct: 126 KEKVGWRRFSAVGIGLIGTMIVIQPSFEIFGMVSLLPLATAVTFAIYLILNRKYGAKESP 185
Query: 200 MCVLAIPALFYVVWNGFSG----------GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L ++ G + ++ L L+ G + + I
Sbjct: 186 LTMQLYAGLGGWLFVGVAMLLAADRSFDDMHFALPHSVQPWLLLLLLGTIGTVSHLIVVQ 245
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K A +S + +Y + ++ + I + + I++ + +
Sbjct: 246 AFKLAPVSMLAPFQYLEIVNAVLVGLIIFGDFPTPSKWLGIAIIIGSGFYVFMRESKKK 304
>gi|116250443|ref|YP_766281.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255091|emb|CAK06165.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 301
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 86/267 (32%), Gaps = 12/267 (4%)
Query: 40 TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
+P++ + L +V + RV +L + + ++ MLV
Sbjct: 32 SPIFVR-LSEVGPMATAFWRVALALIPIVIVSL----MKKERGPKPQSLSDYAMLVLPGV 86
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
+LA+ + +L + + PV + VF R++ + +I + + ++
Sbjct: 87 MLALDLAAWHLSLTMTSVANATLLANLAPVFVTLIAFVFFSARISRVFVIGLAVALSGVV 146
Query: 160 IMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
I+ IA + A + I + A A+
Sbjct: 147 ILKGGPAAIGNGDLRGDGIAMIAAFFYACYILAIGRLRSRFDTIRIMLWSTACAAVCIFP 206
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
G ++ + ++ +Y + + + P++ +
Sbjct: 207 IGLIYEGHMLPATVYGWSIVFGLAFISHAGGQVAITYALAYLPPAFSSLTLLLQPVVAAI 266
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +L + I T++ + +V+ +++
Sbjct: 267 LAWALLNEAIGTMQALGGAVVLAGIMI 293
>gi|15901297|ref|NP_345901.1| hypothetical protein SP_1447 [Streptococcus pneumoniae TIGR4]
gi|111657366|ref|ZP_01408123.1| hypothetical protein SpneT_02001419 [Streptococcus pneumoniae
TIGR4]
gi|116516351|ref|YP_816742.1| hypothetical protein SPD_1276 [Streptococcus pneumoniae D39]
gi|168483939|ref|ZP_02708891.1| membrane protein [Streptococcus pneumoniae CDC1873-00]
gi|168486143|ref|ZP_02710651.1| membrane protein [Streptococcus pneumoniae CDC1087-00]
gi|168489609|ref|ZP_02713808.1| membrane protein [Streptococcus pneumoniae SP195]
gi|168575906|ref|ZP_02721821.1| membrane protein [Streptococcus pneumoniae MLV-016]
gi|237651098|ref|ZP_04525350.1| hypothetical protein SpneC1_10382 [Streptococcus pneumoniae CCRI
1974]
gi|237821027|ref|ZP_04596872.1| hypothetical protein SpneC19_01629 [Streptococcus pneumoniae CCRI
1974M2]
gi|303254392|ref|ZP_07340499.1| hypothetical protein CGSSpBS455_02884 [Streptococcus pneumoniae
BS455]
gi|303259043|ref|ZP_07345022.1| hypothetical protein CGSSp9vBS293_11298 [Streptococcus pneumoniae
SP-BS293]
gi|303261723|ref|ZP_07347670.1| hypothetical protein CGSSp14BS292_04975 [Streptococcus pneumoniae
SP14-BS292]
gi|303264396|ref|ZP_07350316.1| hypothetical protein CGSSpBS397_10860 [Streptococcus pneumoniae
BS397]
gi|303267536|ref|ZP_07353384.1| hypothetical protein CGSSpBS457_08759 [Streptococcus pneumoniae
BS457]
gi|303269322|ref|ZP_07355095.1| hypothetical protein CGSSpBS458_04628 [Streptococcus pneumoniae
BS458]
gi|307068098|ref|YP_003877064.1| drug/metabolite transporter (DMT) superfamily permease
[Streptococcus pneumoniae AP200]
gi|14972935|gb|AAK75541.1| membrane protein [Streptococcus pneumoniae TIGR4]
gi|116076927|gb|ABJ54647.1| membrane protein, putative [Streptococcus pneumoniae D39]
gi|172042785|gb|EDT50831.1| membrane protein [Streptococcus pneumoniae CDC1873-00]
gi|183570786|gb|EDT91314.1| membrane protein [Streptococcus pneumoniae CDC1087-00]
gi|183571946|gb|EDT92474.1| membrane protein [Streptococcus pneumoniae SP195]
gi|183578181|gb|EDT98709.1| membrane protein [Streptococcus pneumoniae MLV-016]
gi|301802177|emb|CBW34922.1| putative membrane protein [Streptococcus pneumoniae INV200]
gi|302598639|gb|EFL65678.1| hypothetical protein CGSSpBS455_02884 [Streptococcus pneumoniae
BS455]
gi|302637303|gb|EFL67791.1| hypothetical protein CGSSp14BS292_04975 [Streptococcus pneumoniae
SP14-BS292]
gi|302639986|gb|EFL70442.1| hypothetical protein CGSSpBS293_11298 [Streptococcus pneumoniae
SP-BS293]
gi|302641152|gb|EFL71526.1| hypothetical protein CGSSpBS458_04628 [Streptococcus pneumoniae
BS458]
gi|302642937|gb|EFL73236.1| hypothetical protein CGSSpBS457_08759 [Streptococcus pneumoniae
BS457]
gi|302646208|gb|EFL76435.1| hypothetical protein CGSSpBS397_10860 [Streptococcus pneumoniae
BS397]
gi|306409635|gb|ADM85062.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Streptococcus pneumoniae AP200]
gi|332073754|gb|EGI84233.1| hypothetical protein SPAR50_1409 [Streptococcus pneumoniae GA17570]
gi|332201885|gb|EGJ15955.1| hypothetical protein SPAR93_1483 [Streptococcus pneumoniae GA47368]
Length = 298
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|261212978|ref|ZP_05927262.1| putative membrane protein [Vibrio sp. RC341]
gi|260838043|gb|EEX64720.1| putative membrane protein [Vibrio sp. RC341]
Length = 299
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 3 YLLPFLTVLIWGGNSIVNKLAAATIEPSAMSFYRWLLAMVILTPFCL----PSAIRQWAV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKHNLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L I+ +L + L M + + Y +
Sbjct: 119 LSIVGGVLSLCGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L ++ + +H +L + ++ I
Sbjct: 179 WTLIYLQGVCAVLMLTPLWLTSDHLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + + +V+ + + L +
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGEKVQPYHLVGGLLVISGVALSQLKIQRRN 289
>gi|229148809|ref|ZP_04277057.1| Transporter, EamA [Bacillus cereus m1550]
gi|228634603|gb|EEK91184.1| Transporter, EamA [Bacillus cereus m1550]
Length = 316
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 97/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFLLSGVILLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNIRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
>gi|212639877|ref|YP_002316397.1| drug/metabolite transporter (DMT) superfamily permease
[Anoxybacillus flavithermus WK1]
gi|212561357|gb|ACJ34412.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Anoxybacillus flavithermus WK1]
Length = 315
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/276 (9%), Positives = 79/276 (28%), Gaps = 4/276 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G+L++ A +WG + +++ L+ V ++ R + ++ + +
Sbjct: 25 RKTFFGSLYLSLAASIWGGMYVVSKYVLDYVPPFTLVWFRYAIAFFVLWAILRVQRVPVP 84
Query: 80 LLKDTLKNPKAVGMLVFS---ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K+ K+ ++G++ + + + +F + +
Sbjct: 85 KEKEDWKHIISIGIVGYVVSISLQFVGTKWSDAHTASLITSATPAFIVIFARWMLNEALT 144
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L +++ T G LL A +
Sbjct: 145 LRKLSALLLATAGVVVVVGFGGGETTSFFGNVLLVGAAVTWALLSVLVKIASDRLPVLVM 204
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+A ++ + + + + F +++ G++
Sbjct: 205 TTYAIFVAWIGTTPMMVWEWWRVTSVTFSFPVVLGVIYLGVVSTAGAFFLWNKGMEMMDA 264
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
S + + PL+ + L + + I +
Sbjct: 265 SIGSLFFFFQPLVGSLFGWLFLHEQLHASFWIGGAL 300
>gi|163938838|ref|YP_001643722.1| hypothetical protein BcerKBAB4_0835 [Bacillus weihenstephanensis
KBAB4]
gi|163861035|gb|ABY42094.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 295
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/277 (12%), Positives = 89/277 (32%), Gaps = 13/277 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + +
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIAFLLSGLIFY--------KHLFKV 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K V A++L + + F + F +T + L ++FLK
Sbjct: 61 DFKTVKYAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPILSAIFLKHIPERK 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ +L I+ + ++TL S G + ++ + A + +
Sbjct: 121 VILGIVLTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGNVTKHVNSIALGVIQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L LF ++++ + L + F + + + G++
Sbjct: 181 LGFVGLFSLIFSLVMETPKLPSTINSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + + + + ++++++++
Sbjct: 241 FSLEPVFSAGFAFVFTGETLTGKGYLGATLILVSVLI 277
>gi|317059077|ref|ZP_07923562.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313684753|gb|EFS21588.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 327
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 98/302 (32%), Gaps = 7/302 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ E ++ F F A +L+ + +++ L EQ+S + + S + G+ +
Sbjct: 1 MEGEKTMNNKIISIFFAFIAAMLYALNIPFSKLLLEQISPVFMASFLYFGAGIGMLCLSL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G K T K ++F + + F + + S V +
Sbjct: 61 LKKGNKEQNKLTKKELPYTLGMIFLDILAPISLMFGLKWISPTNA---SLLNNFEIVATS 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIP 189
+ F +E+++ A LLI LS ++++L L A+ +
Sbjct: 118 CIALFFFQEKISSKMWAAILLITLSSVLLSLDEQTNLSFSYGAIFILLACIFWGMENNCT 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S +++ VL + + + LI L +
Sbjct: 178 RMLSSKNIVQIVVLKGICSGFGSFIVAFVIGEHLPHFFLILIILILGFLSYGLSIFFYVK 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K + P + S I ++ + + I+++ ++ +L T+
Sbjct: 238 AQKELGAAKTSAYYSINPFIGTFLSFLIFQEKLSKYYFLALFIMILGTILVILDTLFIKH 297
Query: 310 KN 311
K+
Sbjct: 298 KH 299
>gi|323529041|ref|YP_004231193.1| RarD protein, DMT superfamily transporter [Burkholderia sp.
CCGE1001]
gi|323386043|gb|ADX58133.1| RarD protein, DMT superfamily transporter [Burkholderia sp.
CCGE1001]
Length = 296
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 106/291 (36%), Gaps = 4/291 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---L 78
G A ++ + Y L +S L++ + R++W++PG +
Sbjct: 5 SPRRGIALSASACAMFALLSAYATLLAPLSGLDIFAWRIVWTVPGALLLVALRKRLPILR 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LL + ++ +A +L F++A L + S YF+ P++ V +G +
Sbjct: 65 ELLYRMVTQAALGVAMIAAAALLGAQLWIFLWAPLHGRMLEVSLGYFLLPLVMVLVGRFY 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ERL+ LQ A + + + +G + V + +
Sbjct: 125 YRERLDGLQWAAVVCAAVGVGHELWVTG-AFSWPTLWVALGYPPYFVLRRKIPYDSLAVF 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++ + L L G G L++ + + ++
Sbjct: 184 TVEMILLVPAAVAFIVSGGSLALISGRLDMWLLLLPGLGALSTLALASYLTASRLLPVAL 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
GI+ Y P+L+++ S+ +L + + + + + IA+ + L ++
Sbjct: 244 FGILGYVEPVLLVLVSITLLGETLSAAQLATYVPIWIAVALTALHSMRFVR 294
>gi|114881112|ref|YP_758653.1| PecM-like protein [Pseudomonas aeruginosa]
gi|114703523|emb|CAK12660.1| PecM-like protein [Pseudomonas aeruginosa]
Length = 361
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 82/266 (30%), Gaps = 15/266 (5%)
Query: 56 ISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTR 115
+ R L + + + + + + + A +++ W ++
Sbjct: 105 MLLRALPAGLLLVMIV----------RQIPTGIWWMRIFILGALNISLFWSLLFISVYRL 154
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA 175
G + + V P++ VF+ + L + + ++ A+ + ++ L L + +A
Sbjct: 155 PGGVAATVGAVQPLMVVFISAALLGSPIRLMAVLGAICGTAGVALLVLTPNAALDPVGVA 214
Query: 176 VTW-----SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
A+ LA L V
Sbjct: 215 AGLAGAVSMAFGTVLTRKWQPPVPLLTFTAWQLAAGGLLLVPVALVFDPPIPMPTGTNVL 274
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + ++ GI R + + V ++ + +P ++ L Q + ++ I
Sbjct: 275 GLAWLGLIGAGLTYFLWFRGISRLEPTVVSLLGFLSPGTAVLLGWLFLDQTLSALQIIGV 334
Query: 291 GIVVIAMVVYLLPTVINSGKNKTKKS 316
+V+ ++ + + +KS
Sbjct: 335 LLVIGSIWLGQRSNRTPRARIACRKS 360
>gi|83716494|ref|YP_440427.1| rarD protein [Burkholderia thailandensis E264]
gi|167617188|ref|ZP_02385819.1| rarD protein [Burkholderia thailandensis Bt4]
gi|257141066|ref|ZP_05589328.1| rarD protein [Burkholderia thailandensis E264]
gi|83650319|gb|ABC34383.1| rarD protein [Burkholderia thailandensis E264]
Length = 297
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 103/300 (34%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S G A L+ + Y + L ++ L++ + R++W+ PG +V
Sbjct: 1 MSAAADYPRAGRGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIVWTAPGAIAIVVL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLSRAFASARFALSLAASAGLLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSGLQWLALACAATGVAHELWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + +P + G + L L L +
Sbjct: 181 ADSLALFAVEMLALLPVAAATLAAGGTSVADRPLLWALLLPGLGAISTLALASYL---KA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + +A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLDEALSWQQLATYAPIWVAVALTAWHGFLMARR 297
>gi|83747330|ref|ZP_00944371.1| Transporter, drug/metabolite exporter family [Ralstonia
solanacearum UW551]
gi|83726030|gb|EAP73167.1| Transporter, drug/metabolite exporter family [Ralstonia
solanacearum UW551]
Length = 298
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 82/294 (27%), Gaps = 9/294 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G LF+ A + G T + ++ + + + R +LP +F ++
Sbjct: 2 SNRTIGYLFLSLAMMTVGSTVIASKLIAGSLPPFPATALRFAVALPFLFALVLLRGERWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +++ + + I L P IS V L
Sbjct: 62 SLSG----RAWGLLILQAGAGSVGYTTLLISGLAYLPAADAGVVIGTLPAISALFSVVVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP----LLSLAIAVTWSAYCFARKTIPVGSSEG 195
ER +++ LL + ++ + + + F +
Sbjct: 118 GERPKLRLMVSVLLATIGVMAVAWTGSGSASLLGVLFILGAVICESAFILLNKRMPVPLP 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + L + + + + F ++ G R
Sbjct: 178 PLLQATAMTGLGLLVSLPVAVLDFPSTAPSSAAVAAVVWYALVPTVGGFLLWYAGAARVS 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S APL + + L + I + V++A++ L S
Sbjct: 238 GSEAATFTAVAPLTAVALAALFLHERIGATQAFGVVAVILAILTLTLSVRPLSR 291
>gi|326938058|gb|AEA13954.1| drug/metabolite exporter family [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 306
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 60 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 120 NYWIGIILGAIGVLFITIPSKSADQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + G + + ++ ++
Sbjct: 180 EVFTTLTLIIGAVILLPFALVEILYYGLPKIETWKTGLSVIYLVIGATILAYWFWNKALE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 240 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGV 284
Score = 40.7 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ + +P
Sbjct: 4 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKQLQKSVVHKKVP 63
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I I
Sbjct: 64 WKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRLNYWI 123
Query: 289 VFGIVVIAMVVYLLPT 304
+ I ++ +P+
Sbjct: 124 GIILGAIGVLFITIPS 139
>gi|260911230|ref|ZP_05917832.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260634660|gb|EEX52748.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 340
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 87/306 (28%), Gaps = 20/306 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
N P + +F A + WG+ + + + ++S RV + A ++
Sbjct: 35 SPNRGTPPLQAHAAMFLACLFWGLMAPLGKDAMSHGIDGITMVSFRVAGGAALFWLASLF 94
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + L + F L S P+ ++
Sbjct: 95 TRK------EHVPRKDVLRFAGAAVFGLVCNQCCFTIGLSLTSPINASIVTTSMPIFAMV 148
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS----------LAIAVTWSAYCF 183
++ LKE + + L+ LI+ L S A ++
Sbjct: 149 FSAIILKEPITGKKATGVLMGCSGALILILTSAAATNRVQGDIRGDLLCLAAQFSYSFYL 208
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG--GEHFFLGNIPDTLFLIGYGLLNS 241
+ V + + L + + G +G +
Sbjct: 209 SLFNPLVRRYSVITVSKWMFFWATLLLLPFTGAHVAALPWAQIGATTWLETAYVVVICTF 268
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+C+ G K + + V I Y P++ + SV + + + + +V + +
Sbjct: 269 VCYCLIMVGQKTLRPTVVSIYNYVQPIVSVTVSVLMGIGVLKWAQGLAIILVFGGVWLVT 328
Query: 302 LPTVIN 307
Sbjct: 329 KSKSKR 334
Score = 39.5 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 35/113 (30%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I M + + W + F C F+ G+
Sbjct: 74 ITMVSFRVAGGAALFWLASLFTRKEHVPRKDVLRFAGAAVFGLVCNQCCFTIGLSLTSPI 133
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ + P+ +V S ILK+PI + + ++ +L + + +
Sbjct: 134 NASIVTTSMPIFAMVFSAIILKEPITGKKATGVLMGCSGALILILTSAAATNR 186
>gi|332701412|ref|ZP_08421500.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
gi|332551561|gb|EGJ48605.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
Length = 302
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 89/283 (31%), Gaps = 17/283 (6%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + +WG T + + + + R L + + F + L +L +
Sbjct: 8 LVASMAIWGGTWVSGRIVAGAMEPFSAAFLRFLVASIFLVFMTMREEKRLPIL----RRE 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ L+ T + + FF L + + TP + +FLKERL
Sbjct: 64 HMLHALLLGLTGVFAYNAFFFSGLRSVPAGKAALIIASTPAVMAIFSGLFLKERLGRWHA 123
Query: 149 IAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L + +L++ G + +A + ++ + + S
Sbjct: 124 VGIPLSLSGVLLIISRGDPLALLEGGLGRGELYIFGCVAAWSAYSLLGKRAMVIMSPLTA 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
C++ L G +G + L + F + GIK
Sbjct: 184 VTWSCIIGCILLLPAALAEGLAGTVRSIGPVVWGNLLFLGVMATGLSFAWYYEGIKAIGA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S G+ P+ I V +L + + +V+ + +
Sbjct: 244 SRAGVFINLVPVAAIGLGVLVLGESVTWTLAAGGAMVICGVWL 286
>gi|294677253|ref|YP_003577868.1| hypothetical protein RCAP_rcc01716 [Rhodobacter capsulatus SB 1003]
gi|294476073|gb|ADE85461.1| protein of unknown function DUF6, transmembrane [Rhodobacter
capsulatus SB 1003]
Length = 296
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 81/291 (27%), Gaps = 8/291 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G+L + A + I + +FL + I + +F + G
Sbjct: 6 ENLRGSLLMVLAMAGFAIEDMCVKFLAGHLPVGEILMLLGIGGTAIFATLALRKGDRLFS 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+D L LA S TP+ ++FL E
Sbjct: 66 RDLLAPAVIGRNFGELIGTLAFVCAVAF-----TPLAEASAILQATPLAVTLGAALFLGE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + A + L +LI+ L++ A + + M
Sbjct: 121 QVGWRRWSAIGVGFLGVLIVIRPGTEGFSVLSLFAVVGVLGLAARDVVTRRVPKSITSMQ 180
Query: 202 VLAIPALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + L D + + + + ++ ++S +
Sbjct: 181 LATYGFASVIPAGALLVPFQGPMILPTAFDLAGIAAALVFGTAGYYALIAAMRLGEVSVI 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
YT + ++ + + D I I+V + +Y L K
Sbjct: 241 TPFRYTRLIFALIIGWAVFAETPDRWTLIGGAIIVAS-GLYTLARQRRLAK 290
>gi|242281236|ref|YP_002993365.1| hypothetical protein Desal_3781 [Desulfovibrio salexigens DSM 2638]
gi|242124130|gb|ACS81826.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
salexigens DSM 2638]
Length = 292
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 91/284 (32%), Gaps = 8/284 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL--LKDT 84
+ + I+WG + + ++ + L + R + I
Sbjct: 10 ILLLITAIIWGAAFVAQRVGMDYMGPLTFNAVRFALGAAALIPLIQRIDSEKKKDGTYRE 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + L + F + L+ F + V +G F ++
Sbjct: 70 VDKGSFIKGSLIAGGALFLGATFQQWGLVYTTAGNAGFITGLYVVFVPIMGLFFKQKT-G 128
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
I A+L ++ + +++++ G + + V A FA + + + A
Sbjct: 129 LPTWIGAVLAVIGMYLLSVNEGFHIEMGDLLVLICAVFFAGHVVVISLLSSKIDPVKFAA 188
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDT----LFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ V++ + L G + + + + AK +
Sbjct: 189 GQFVVCSVFSFIGAFSFETMTFAGIWAGIVPILYGGLMSVGVAYTLQVVAQQEAKPAHAA 248
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ + ++ +L + + T I G+++ M++ + +
Sbjct: 249 IILSLESVFAALAGWLLLGEILTTQGLIGCGLMLSGMLLSQIKS 292
>gi|161870631|ref|YP_001599804.1| hypothetical protein NMCC_1700 [Neisseria meningitidis 053442]
gi|161596184|gb|ABX73844.1| conserved hypothetical protein [Neisseria meningitidis 053442]
Length = 294
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 11 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 64 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 124 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 184 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 244 NVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 286
>gi|154493584|ref|ZP_02032904.1| hypothetical protein PARMER_02924 [Parabacteroides merdae ATCC
43184]
gi|154086794|gb|EDN85839.1| hypothetical protein PARMER_02924 [Parabacteroides merdae ATCC
43184]
Length = 313
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/307 (11%), Positives = 99/307 (32%), Gaps = 21/307 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G F +G+ PL+T L + + ++ +R L++ + +
Sbjct: 1 MNNLKGFAFGILTSATFGLIPLFTLPLMAKGMQFDSILFYRFLFAALALAGIMAAKKESF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +L+ F + + + +F PV + +F
Sbjct: 61 ------HADKRDIPVLILLGFFYTASAMFLFWGYNFMSAGIATTLHFTYPVFVTLIMLLF 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-------------PLLSLAIAVTWSAYCFAR 185
+E+ + + ++A +L I + +++ L A+ +T A
Sbjct: 115 FREKTSWITLMAIVLAICGVARLSIGEEEIRLSALGVFIVLLSALGYALYITTVNKFLAG 174
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ G + V + + + G + G ++ ++ +
Sbjct: 175 GSTSRLKMGGRKLTFYVFIVSTALFAIKAGTNQGIQPIPDSMSFVNLILLAIVPTVISNI 234
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + ++ P+ + + + +P + +++IA+ + +L
Sbjct: 235 TLVLAVHNIGGTLTAVLGAVEPITAVCVGILVFSEPFTPNLAVGILLIIIAVTMIILSKS 294
Query: 306 INSGKNK 312
I K
Sbjct: 295 IQGTLRK 301
>gi|297539690|ref|YP_003675459.1| hypothetical protein M301_2522 [Methylotenera sp. 301]
gi|297259037|gb|ADI30882.1| protein of unknown function DUF6 transmembrane [Methylotenera sp.
301]
Length = 311
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 98/301 (32%), Gaps = 16/301 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + +F I+WG + + ++ S + + R + +F I
Sbjct: 7 SKQEKKLIVKAFIALFILTIIWGYNWVVMKQAVQFASPFQFAAIRTFFGSIVLFVLIYLT 66
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L+L + MLV G I+AL+ T+ + P +
Sbjct: 67 KRPLAL-------KEFPTMLVLGLLQSCGFTGLLIWALVEGGAGKTAVLTYTMPFWVMLF 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK-------- 186
L E++ Q +A L + ++++ I ++ + +
Sbjct: 120 AWPMLGEKIQGWQWLAVLFALFGMVLIFDPLHIKSDGFSMFLAVCSGVSWAISAIVSKKL 179
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + ++ VV + L L + +
Sbjct: 180 HHRAPHLDLLNLTAWPMFLGSIPVVVIAFILPAQPMQWTPTFIFAVLFNVLLSGCLAWVL 239
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y ++R + + AP++ ++++ L + +T I + +++V ++I
Sbjct: 240 WLYALQRLQAGVASMASMLAPVIGVIAAWIQLNEVPNTYELIGMVFIALSLVTISGISII 299
Query: 307 N 307
Sbjct: 300 K 300
>gi|261493551|ref|ZP_05990071.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495389|ref|ZP_05991837.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308894|gb|EEY10149.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310733|gb|EEY11916.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 287
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 108/288 (37%), Gaps = 6/288 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL--- 80
+ G L A +L+G + L + + R++ +P + AI+ F +
Sbjct: 2 LRGILASLAANVLFGAVYYFAILLRPLEGEAMFGFRIVVVIPFILLAIILFKQQSAFADL 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +NP V +++ A V F++A Q SF Y + P+++V LG + K
Sbjct: 62 LQKIRQNPPLVLVILLLALNTGVQLWLFLWAPNHGQALQVSFGYLLLPIVAVALGKMVFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ ++ L ++ + + + +A +
Sbjct: 122 EHFTRLKWLSLLFAVIGVGSSLFFNSTISWATWLAGLGYPLYITLRRYFQ--INTLATFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + N +L GL++ F ++ ++ +G
Sbjct: 180 VELLLVLPVALYYLSQVEMTPIVAENPQIYFYLGLLGLVSGSAFILYILSSNLLPINVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ Y PL+M++ S I + +D I+ +++++ + + +
Sbjct: 240 LLGYVEPLVMLLISFAI-GEKLDANSYILMVCLLVSIGLLSWDSFRSK 286
>gi|229199816|ref|ZP_04326415.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
m1293]
gi|228583659|gb|EEK41878.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
m1293]
Length = 310
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALEVIQPFTLLFIRLFFAGGICLL----FSFKQLKKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 64 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIVLGAAGVLLITIPSSNGNQEVSLIGDTLILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMVETFYYGFPEIETWKTGFSVMYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
S G+ PL+ IV+S+ +L + + I +V+I +
Sbjct: 244 TVSASVSGLYLNALPLISIVASIALLDESLTWKIVIGGSLVLIGV 288
Score = 40.3 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 47/143 (32%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALEVIQPFTLLFIRLFFAGGICLLFSFKQLKKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S LK+
Sbjct: 61 VVHKQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAIFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + +++ +P+
Sbjct: 121 IQLNYWIGIVLGAAGVLLITIPS 143
>gi|148974936|ref|ZP_01811916.1| hypothetical protein VSWAT3_25464 [Vibrionales bacterium SWAT-3]
gi|145965445|gb|EDK30694.1| hypothetical protein VSWAT3_25464 [Vibrionales bacterium SWAT-3]
Length = 305
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 92/292 (31%), Gaps = 9/292 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
GTL + A +LWG T F +S L + + +
Sbjct: 14 GTLAIVFASVLWGTTGTAASFAPDLSPLAIGAFSMGVGGLMQAGLAYRKILSSLDKLLIN 73
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K A L + LA + + + + + F + ++ + +
Sbjct: 74 KKLLAASALALAIYPLAFYSSMKLSGVAMGTVVSIATAPFFSALLECLISKDNNINKRWL 133
Query: 146 LQIIAALLIILSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ I L+ G + + +A A +
Sbjct: 134 TSFAIGVVGIGLLVFSESSVGSEPNDDLKLLGIGLGLVAGLCYAIYSWATKSLIDQGIKS 193
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
M + ++ + G++ F + + L + FS+G++
Sbjct: 194 QAAMGSIFGLGAMLLLPTLWFTGDNLFASSTNIFVVSYLVLLPQCLGYIAFSFGLRHVTA 253
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S+ ++ P++ V +V+I+ + I V IV ++V+ + + P V +
Sbjct: 254 SSANLITLLEPVVAAVLAVWIVGERIPLVGWIVMLLIVMCLFIQSQPNVQRN 305
>gi|157963886|ref|YP_001503920.1| hypothetical protein Spea_4075 [Shewanella pealeana ATCC 700345]
gi|157848886|gb|ABV89385.1| protein of unknown function DUF6 transmembrane [Shewanella pealeana
ATCC 700345]
Length = 328
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 95/315 (30%), Gaps = 19/315 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVY------ 73
T G + +LWGI + T LE + ++ R + +
Sbjct: 2 TNTQKGWMAAIFVGLLWGIPWIVGTPILEVMDPQVLVWLRYTVAFVTLGLIFNIGLASGK 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ +L + P++ +
Sbjct: 62 MKKKTDFKLNWQNRNDIFWAACCGIIGQGSFSFLSFLSLDYITASENGVIQGLIPILILS 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G + ER +QI+ AL L + I+ + I A +
Sbjct: 122 VGFLRHGERFTVMQIMCALGAFLGVAILVMDPQSETKGFNIGHLICFGSAASFACMAYAR 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHF------------FLGNIPDTLFLIGYGLLNS 241
+ +A +V + G F F + +I ++
Sbjct: 182 AKLADKYGSVATMFHQFVFASLGFGLYLFVVGADFSSALNVFSSPLRILCIVILGVCISG 241
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ YG++R + G+ PL + +VF L + + +R + +V+ +M+ ++
Sbjct: 242 MSYLVYIYGMERVGVDGTGMALNLMPLSSFILAVFALGEQVTPMRLVAIAVVITSMIAFM 301
Query: 302 LPTVINSGKNKTKKS 316
N K + ++
Sbjct: 302 KLGNKNKAKAEEVEA 316
>gi|322376889|ref|ZP_08051382.1| membrane protein [Streptococcus sp. M334]
gi|321282696|gb|EFX59703.1| membrane protein [Streptococcus sp. M334]
Length = 298
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 97/298 (32%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMVLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 MLTFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
K +I++ +L I ++ H L + + + I +
Sbjct: 121 DKVAPTLAEIVSIMLAIGGTFLIATHGQLDQLSITPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQTAIPTSLDVLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + + +++ A+ + L ++
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLLLEK 298
>gi|118588781|ref|ZP_01546189.1| putative permease protein [Stappia aggregata IAM 12614]
gi|118438767|gb|EAV45400.1| putative permease protein [Stappia aggregata IAM 12614]
Length = 385
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/313 (12%), Positives = 97/313 (30%), Gaps = 20/313 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G + +++ + + EQV + E++ R + L V +
Sbjct: 72 TRQAPLIGITLKVASTMVFFVMATALKIAAEQVPIGELVFARNFFGLFPVLIMVAMRREL 131
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ A++ AL + F +P+ V L
Sbjct: 132 GLAFRTANPLGHLTR-----ASVGLTAMVCGFTALSLLPLPDATAIGFASPLFVVVLAFF 186
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-------------SGIPLLSLAIAVTWSAYCFA 184
L E++ + A + + +L++ + L+ A +
Sbjct: 187 LLGEKVRVYRWSAVCVGFVGILVVLSPHLGDAGLDNDSMIGALIGLTGAGFAALAMITVR 246
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ +S + +I +L + G+ + + ++P L+ GL
Sbjct: 247 KLCETERTSTIVTWFAGMSSILSLLTLPLGFLLPGQAWIVPDLPTAGLLLLIGLAGGVGQ 306
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + A ST+ +Y L I+ + + + IV+ A + +
Sbjct: 307 ILLTQSYRFADASTIAPFDYVNMLWAIIVGWVVFNETPLPAVVLGALIVIAAGIFVIYRE 366
Query: 305 VINSG-KNKTKKS 316
+ K +++
Sbjct: 367 HKLGLDRTKARRA 379
>gi|120436439|ref|YP_862125.1| hypothetical protein GFO_2093 [Gramella forsetii KT0803]
gi|117578589|emb|CAL67058.1| membrane protein containing DUF6 [Gramella forsetii KT0803]
Length = 289
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 95/294 (32%), Gaps = 9/294 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + L + A +L + + +++ + + I +R L ++ + +
Sbjct: 2 SERRQNLTNILQLNFAVLLISTSGVLGRYIT-LHPVITIFYRCLIAVIVFYLFCRWKGID 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + ++ HW + ++L + S F PVI+ FL V
Sbjct: 61 LKIENKRDLLKMIL-----GGILMGAHWITYFFSLQFSSVAIALLSLFTYPVITAFLEPV 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
K R N + I LL++ + ++ L++ + VT + + R + E
Sbjct: 116 LFKTRFNKVHIALGLLVLAGIYFLSPEFDLENDSFLAIILGVTSAVFYALRNLLMKREVE 175
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + +I L +F K
Sbjct: 176 RYNGSALMFYQILVVSFLLFPSVFFSDIEAIAGQWKPLVILAVLTTCIGHTLFLKSFKNF 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ IM P+ I L + + +++ A+++ L V
Sbjct: 236 SITAASIMSSIQPVYGIGLGAIFLSEIPSLKTLVGGTLIISAVIIESLLAVRKK 289
>gi|27367810|ref|NP_763337.1| drug/metabolite transporter superfamily permease [Vibrio vulnificus
CMCP6]
gi|320158080|ref|YP_004190458.1| permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus MO6-24/O]
gi|27359383|gb|AAO08327.1|AE016813_79 Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus CMCP6]
gi|319933392|gb|ADV88255.1| permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus MO6-24/O]
Length = 295
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/283 (8%), Positives = 88/283 (31%), Gaps = 12/283 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A IL ++++ ++ + + R L + +
Sbjct: 11 LILATILSAFGWIFSKETIQGLPPFGFVGLRFLIASLCLLPFCY-------RSLFKASWG 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + ++ +F ++ ++ F+ V K+R +
Sbjct: 64 DVRSAALVGLLLATALMSWIHAISISDTLGEGAFILSLSMLMVPFVAWVLFKQRPKRIFW 123
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEGFFIEMCVLA 204
++ + L ++L G + ++A F + + + L
Sbjct: 124 VSLPIAASGLAFLSLADGWQSSVSQLWFLFNAVVLALHFNINSKYSQTLPILVLTCIQLF 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + + + + F L + + + + K+ ++
Sbjct: 184 VTGVIGLSASLLFESVPTHIEPTIWAWFAASTILATALRYVMQTMAQKQINPGNAALIMI 243
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
P+ ++ SV + + T + + G+++ ++++Y ++
Sbjct: 244 LEPVWTVILSVLWYSESLSTNKLVGCGLILFSLILYRTDGKLS 286
>gi|325123035|gb|ADY82558.1| chloramphenicol-sensitive protein [Acinetobacter calcoaceticus
PHEA-2]
Length = 315
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 56/293 (19%), Positives = 123/293 (41%), Gaps = 5/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A +G+ YTQ L Q+ + R++ +LP + + + + ++
Sbjct: 4 KGVILSVMASFTFGVLYFYTQLLSQLDSEQTFGWRIIATLPFLTLFMWWSGDLAYIKNIY 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV E
Sbjct: 64 QRILAKPSLLLLLITTSILTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYGE 123
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++ Q +A +L ++ + G A+ + F + + G F
Sbjct: 124 KISKFQWVAIILAVIGVSHEIWRLGSIAWETALVAVGYSAYFLLRKKIKTDNLGGFWWDL 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ +P Y+ G F+ +L +IG G+L++ + + L G+
Sbjct: 184 VIIMPVAIYLTHTGLL-PYSKFIDQPSLSLIIIGLGILSAIGLGSYILASRFLPLVVFGL 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ ++ +L + I + + A+ V +L I+ + + K
Sbjct: 243 LGYLEPVLLALA-SLVLGESIGQEEWFTYIPIWCAVFVLVLEGAIHLYQQRQK 294
>gi|239827209|ref|YP_002949833.1| hypothetical protein GWCH70_1827 [Geobacillus sp. WCH70]
gi|239807502|gb|ACS24567.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
WCH70]
Length = 309
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 94/299 (31%), Gaps = 13/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + V LWG++ Q L +Q++ ++ R++ + + V
Sbjct: 6 SSRIKGLMMVITGATLWGLSGTAAQVLFQHKQITAEWLVVVRMMIAGSALLLFAVCKRMA 65
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + +K+ ++ + F + + ++ T + ++ PV V
Sbjct: 66 IFSIWTGIKSIGSLLLFGFVG--MLGVQYTYFASIATGNAATATLLQYLAPVYIVLYAMA 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKTIP 189
K R + ++A +L +L ++ + L + + A+
Sbjct: 124 AQKHRPSKEVMLAIVLALLGTFLLITNGSTGELKVPLISVVWGILSGVALAFYTLASAQM 183
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + I L L F F +F
Sbjct: 184 LKKWHSIVVVGWGMVIGGGGMCFVFPPFPLPAIRWDVETWLLILFVIVFGTLFAFLLFVE 243
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ + ++ PL +++S+ L P + I +++ +++ S
Sbjct: 244 SIRYLSPTESSLLSSVEPLSAVIASIVFLHVPFGLFQAIGAACIMVTVLLLSPKKERQS 302
>gi|149189929|ref|ZP_01868208.1| hypothetical protein VSAK1_01467 [Vibrio shilonii AK1]
gi|148836244|gb|EDL53202.1| hypothetical protein VSAK1_01467 [Vibrio shilonii AK1]
Length = 295
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 94/291 (32%), Gaps = 12/291 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ +L G ++++ ++ + I R +++ + + SL
Sbjct: 9 FILVFTTLLAGAGWVFSKEAIQGLPPFGFIGLRFIFASLILLPFCMRALKAASL------ 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + + ++ +F ++ + + V K +
Sbjct: 63 -GDCLRAMSVGCFLGSAIFCWIHAISISDTLGEGAFIMSLSMLFVPIVAWVLFKTKPIRA 121
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEGFFIEMCV 202
++ + L +++ + SA F + +
Sbjct: 122 FWLSLPIAAAGLFLLSWKGSWQTDPSQLWFLASAVGLALHFNFNSKYSAQLSPMLLTTLQ 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L ++ + + I F + L S + + + G K A + ++
Sbjct: 182 LFSTGCIGIILSLSVETWPEHISLITWKWFALSVLLATSLRYLMQTTGQKLANPTNAALL 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P+ ++ SV I +P+ + +++ ++V Y L ++++ K K
Sbjct: 242 MLLEPVWTLILSVLIYSEPMPINKVFGCLLLLASLVFYRLSSMVSFRKAKR 292
>gi|149011674|ref|ZP_01832870.1| hypothetical protein CGSSp19BS75_06897 [Streptococcus pneumoniae
SP19-BS75]
gi|147764105|gb|EDK71037.1| hypothetical protein CGSSp19BS75_06897 [Streptococcus pneumoniae
SP19-BS75]
Length = 298
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKGLFLEK 298
>gi|47093120|ref|ZP_00230896.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
gi|47018493|gb|EAL09250.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858]
Length = 302
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 96/295 (32%), Gaps = 18/295 (6%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
WG T+ + + + S R+ + V + K
Sbjct: 1 MASWGFNVTMTKVLVSYFPTVTMTSFRIFTAAITVIIILFITKKLRLPTKWEFGLIFLAS 60
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + G L G P++ VFL+ER+ + + L
Sbjct: 61 IFNIVIHHFFLSNG-----LKLTTGTNAGLILGSAPIVVAIFSVVFLRERIGAWRALGFL 115
Query: 153 LIILSLLIMTLHSGIPLLSLAI------------AVTWSAYCFARKTIPVGSSEGFFIEM 200
I + ++ L +G + +++ A ++ ++ G G+ + +
Sbjct: 116 AGIFGVSLVVLSNGTGISGISLGDIDIFIAMASQAFSFIIIKKLAGSMDTGLMTGYMLFL 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + L + G LF++ + +F +++Y + + S
Sbjct: 176 GSVMLFGLSRFMEPGGMSELVAVHSWKLWLLFVVSAVVATAFGNFVYNYAVGKIGPSRSA 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I PL ++ ++ L + I + + FG ++I +++ + + K K
Sbjct: 236 IFMNFNPLFSLIGALLFLGEAIKIPQLVGFGFIIIGVLLGSGALMDLIYERKKTK 290
>gi|311696477|gb|ADP99350.1| membrane protein containing DUF6, transmembrane [marine bacterium
HP15]
Length = 316
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 11/282 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + I+ ++ + LE V + R L +L +
Sbjct: 10 ILLLVIGNAMALISDVFIKLLEPGAPVFQFAFLRCLITLALLLPMAGQLDRK-------- 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + F A I + AL + ++ P++ + L +E+L
Sbjct: 62 NLFAGLKIHTFRAHIHLAGLLCMVVALANLPLATANAVFYAAPILVMVLSVFLFREKLTP 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L + A ++++ + A+A SA+ A + V + L +
Sbjct: 122 LSVSAVFSGFAGIVLILRP--VEFNWAAVAALGSAFALAINAVLVRKLPKQQSTVHKLFL 179
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L + G + + +G L ++ + V EYT
Sbjct: 180 NYLLILPAAGALAWWEGAQWDSGILIGAMGSALFILGYNITVLLAYRQVDANQVTSAEYT 239
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + D ++V+ +++ L
Sbjct: 240 GLIWAVGIGWIWFGEVPDLWFLAGSLMIVVPLLLIGLQHRRK 281
>gi|227891476|ref|ZP_04009281.1| DMT superfamily drug/metabolite transporter [Lactobacillus
salivarius ATCC 11741]
gi|227866623|gb|EEJ74044.1| DMT superfamily drug/metabolite transporter [Lactobacillus
salivarius ATCC 11741]
Length = 310
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/307 (10%), Positives = 95/307 (30%), Gaps = 11/307 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G ++ A I WG+ + +++L + +SV ++ ++ S + Y
Sbjct: 2 QTRTHLKGVIYASLAGIFWGMAGIASEYLFQDQHISVYWMMGVKMSLSALTLLGLAYYLD 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + +G+++FS LA + + + + + + +F
Sbjct: 62 G-KKIFLVFKSFKDILGIVLFSILGLAGVQFTYSMTVNYSNATVATIIQTLGILPVIFYS 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTI 188
++ K+ Q IA + ++ ++ + I + + + +
Sbjct: 121 AIIFKQLPGRKQWIATITALIGAWLLVTKGSFNQLAISKEAIIWGIFLMLTQAGNSVLPV 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L + + + +F
Sbjct: 181 DLLRRHNPTTISAWAMLVGGIVFEFIHPVWKSVPKFTPAVTLNMLFLIFIGTALSYYLFV 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + +++ PL + I K + + +V+ + + + + N
Sbjct: 241 KSLHLISATEATLLDTFEPLTAALLDFLIFKMQFNWAEILGSLLVISTVFILAVGSEKNE 300
Query: 309 GKNKTKK 315
+ K+
Sbjct: 301 NSDPQKE 307
>gi|188995493|ref|YP_001929745.1| conserved hypothetical protein with integral membrane domain DUF6
[Porphyromonas gingivalis ATCC 33277]
gi|188595173|dbj|BAG34148.1| conserved hypothetical protein with integral membrane domain DUF6
[Porphyromonas gingivalis ATCC 33277]
Length = 357
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/296 (9%), Positives = 86/296 (29%), Gaps = 5/296 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAI 71
++ + + G + +G+ PL+T + S ++ +R ++ +
Sbjct: 51 VTAAFMTSSRLYGLAVGILSSATFGLIPLFTLPVSAKGASFELILFYRFFFAAIAIGILH 110
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
G + + + +G L + H ++ + + + ++
Sbjct: 111 RLSGGSFKVSRADIGPLVLLGFLYAGTALFLFHGYGYMASGVATTIHFLYPLFVTALMLL 170
Query: 132 VF---LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
F L V L L + L+ + +G +++++ F ++
Sbjct: 171 FFGERLSPVPLTAIFIALIGVGLLMGLTGGGDRVGLTGFVIVAISALCYALYIVFVNRSR 230
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+A + G L+ +
Sbjct: 231 VRIMPGRRLTFYVFVAAAGFCLINVLVRQGEVAPLPDAASWGNILLLALVPTVISNLALV 290
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ + + PL ++ V++ + + + G ++IA+ + +
Sbjct: 291 VAVRNIGSTLTSALGAMEPLTSVLVGVWVFDEVLGASAIVGMGCILIAVGLIVFSE 346
>gi|304386991|ref|ZP_07369249.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|254670007|emb|CBA04745.1| probable integral membrane protein [Neisseria meningitidis
alpha153]
gi|304338948|gb|EFM05044.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091]
gi|308389726|gb|ADO32046.1| hypothetical protein NMBB_1823 [Neisseria meningitidis alpha710]
gi|316983842|gb|EFV62822.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325128609|gb|EGC51478.1| putative membrane protein [Neisseria meningitidis N1568]
gi|325130667|gb|EGC53408.1| putative membrane protein [Neisseria meningitidis OX99.30304]
gi|325140757|gb|EGC63271.1| putative membrane protein [Neisseria meningitidis CU385]
gi|325199808|gb|ADY95263.1| putative membrane protein [Neisseria meningitidis H44/76]
Length = 300
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 88/298 (29%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + + + ++ + + P ++L G+ + K
Sbjct: 175 LAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQR 292
>gi|255724958|ref|XP_002547408.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135299|gb|EER34853.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 457
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/323 (10%), Positives = 87/323 (26%), Gaps = 31/323 (9%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-------EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G + + L I + L E + +++ R+ + +
Sbjct: 95 IGISLLLLSQFLNSIMVTTCKLLVTNKGSNEPIHPAQILFVRMFITYICCLLYMGITRSV 154
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + + F F + L +F + FL
Sbjct: 155 PEAPLGPKPIRKLLLLRGFVGFFGVFGMYFSLQYLSLSDAVALTFLVPMVTAFLAFLMLS 214
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----------------------AI 174
L + + +L ++ + T G +
Sbjct: 215 EKYSILEAVCSLFSLGGVVLIAKPTFIFGSASDTESNGDESVESSSSEKRILATIVGLVG 274
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
S + I + + + L + + G N +
Sbjct: 275 VCGASCVYIILRKIGMHAHPLLSVSYFALTCCVVTFFAILVLPGLSFVLPSNAYQWTLFL 334
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
GL F+ + G++R K S +M Y+ + +V V I + + +++
Sbjct: 335 IIGLSGFFMQFSLTAGVQRVKASRASLMAYSGMIFAVVWDVSIWHHFPGMLSLLGITLII 394
Query: 295 I-AMVVYLLPTVINSGKNKTKKS 316
A+++ + +++++
Sbjct: 395 GNAIIILKFKPQKEDSEKQSQQT 417
>gi|241206037|ref|YP_002977133.1| hypothetical protein Rleg_3347 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859927|gb|ACS57594.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 305
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/285 (9%), Positives = 82/285 (28%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A + WG + + L +S + + R ++ + + +
Sbjct: 6 YICLVIATLCWGGNSVAGKLALGHISPMMLTFLRWFLAVAMIAAISL----PQLRKDWPV 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L + + A+ + P++ L +F + ++
Sbjct: 62 VRKNLPLLLFYGVIGYTLFNAMLYSAVQYTTAINVAIEQAGIPMLIFLLNFMFFRTGISL 121
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + + ++ + + H L L +S Y + P
Sbjct: 122 AQCLGFGMTLIGVALTAAHGDLATLLQLSLNRGDGLMLIAIAAYSVYTIFLRWKPPLDWR 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ ++ G + + L + ++ G+
Sbjct: 182 TLMAVPALGAMLTSLPLLLWEAGRGAAQWPDQAGWVITLYTAIFPSLVAQILYIKGVVAI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ P+ + SV ++ + + + I + + + +
Sbjct: 242 GANRAGLFINLVPVFGTLLSVALIGEQLQSFHVIALVLTLGGIAI 286
>gi|159897209|ref|YP_001543456.1| hypothetical protein Haur_0680 [Herpetosiphon aurantiacus ATCC
23779]
gi|159890248|gb|ABX03328.1| protein of unknown function DUF6 transmembrane [Herpetosiphon
aurantiacus ATCC 23779]
Length = 305
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 88/279 (31%), Gaps = 11/279 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ S +G + + I +G ++ + + + + V+ R + +F +
Sbjct: 19 PSTSRQRWLGIAAMLLSAIAFGWLGVFARLAYADGAEPITVLCLRFSIAAVVMFGILRVR 78
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + +G+++ + AL L + ++ P + +
Sbjct: 79 GERLP------RGKLLIGLILLGGIGYVAQSLAYFVALTMASAGLVAVLLYLYPGLVTII 132
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VF KERL ++A +L + + G I A +A
Sbjct: 133 SVVFFKERLTPRIMLALVLALAGSALAIGPIGGGKPLGIIFAISGAVIYAIYITAGSRVT 192
Query: 195 ---GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G V+ A + + G + + + +F G+
Sbjct: 193 AQAGAIPSSTVIMSAAAVVYLGIVLARGPVWPASIDGWLAIIGIALISTVLAIVMFFIGL 252
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+R + + PL+ + ++V +L +PI +
Sbjct: 253 ERIGPTAGSTISALEPLVSVGAAVVVLHEPISLWQLGGG 291
>gi|90416815|ref|ZP_01224745.1| membrane protein, putative [marine gamma proteobacterium HTCC2207]
gi|90331568|gb|EAS46804.1| membrane protein, putative [marine gamma proteobacterium HTCC2207]
Length = 304
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/283 (9%), Positives = 87/283 (30%), Gaps = 2/283 (0%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG+ ++ + ++ + + R + + + +
Sbjct: 11 LILLLTAFIWGLAFVFQRSGMDHIGPITFTFGRFVIGALAILPLWYWMEKPKQIFTFNKV 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N +A + + + + + +Y + + Y V + +
Sbjct: 71 NKQAALLGIVLTSGMLLQQWGMVY-TTAGRAGFLTGVYIVFVPLIGLFFRNKTEWPTWLG 129
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++A + I + I + + + A I ++ F + ++
Sbjct: 130 MVMALCGLYFMAQIDSDEIFIGDILVLGSSVLFALHIIFTGIIANNTSPFRLIFVQFSVA 189
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+L + G ++ L L ++ F + G + A S I+
Sbjct: 190 SLITAILVPIFEGWNWQGILDAGVALLYVGVLSSAVGFTLQVVGQRTAPSSHTAIILSFE 249
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +IL + + + +++ +V L +++
Sbjct: 250 AVFAALCGWWILDEMLTRPELVGCSLILAGGLVSQLKSLLTPK 292
>gi|300693598|ref|YP_003749571.1| tonb box harboring transmembrane protein, multidrug resistance
efflux transporter domain [Ralstonia solanacearum PSI07]
gi|299075635|emb|CBJ34931.1| putative tonb box harboring transmembrane protein, multidrug
resistance efflux transporter domain [Ralstonia
solanacearum PSI07]
Length = 298
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 81/294 (27%), Gaps = 9/294 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L + A + G T + ++ + ++ + R +LP +F +
Sbjct: 2 SNRTIGYLLLSLAMMTVGSTVIASKLIAGNLAPFPATALRFAVALPFLFALVFLRGERWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +++ + + I L P +S + L
Sbjct: 62 RLSG----RAWGLLMLQAGAGSVGYTTLLISGLAYLPAADAGVVIGTLPAVSALFSVIVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--- 196
ER +++ LL + ++ + + + A I +
Sbjct: 118 GERPQLRLVVSVLLATVGVMAVAWTGSGSAPLMGVLFILGAVICESAFILLNKRMPVPLP 177
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + L + + + F ++ G R
Sbjct: 178 PLLQATAMTGLGLLVSLPFAVLDFPVTAPSTAAVAAVVWYALVPTVGGFLLWYAGAARVT 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S APL + + L + I + V++A++ L S
Sbjct: 238 GSEAATFTAVAPLTAVALAALFLNERIGATQAFGVVAVILAILTLTLSVRPVSR 291
>gi|297521425|ref|ZP_06939811.1| predicted chloramphenical resistance permease [Escherichia coli
OP50]
Length = 249
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 114/249 (45%), Gaps = 1/249 (0%)
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
++ S LK ++ P+ + ML SA ++ +W FI+A+ S YF
Sbjct: 1 FFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYF 60
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFA 184
+ P++++ LG +FL ER +Q +A +L I +L+ G P+++L +A +++ Y
Sbjct: 61 INPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLV 120
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
RK I V + G IE L A Y+ S H + L LI G++ +
Sbjct: 121 RKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPL 180
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
F+ R +LST+G +Y P LM + +V + + + F + +A+ ++++
Sbjct: 181 LCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 240
Query: 305 VINSGKNKT 313
+ +
Sbjct: 241 IYTQRRTSK 249
>gi|220924828|ref|YP_002500130.1| hypothetical protein Mnod_4970 [Methylobacterium nodulans ORS 2060]
gi|219949435|gb|ACL59827.1| protein of unknown function DUF6 transmembrane [Methylobacterium
nodulans ORS 2060]
Length = 333
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 89/294 (30%), Gaps = 3/294 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVY 73
+S +G + + + + + L E++ R +++ + + +
Sbjct: 23 HPASSGRPYLGIGLKMLSALAFTLMSAGVKGLADRQFPTGEIVFFRSAFAILPLLIWLGW 82
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALL-TRQGFLTSFSYFVTPVISV 132
+ ++ + + L+ + + A G L + S V V
Sbjct: 83 QGAVIEAVRTSNLRGHILRSLIGACGMFAGFAGLSFLPLSDSVAIGYASPLLVVVLAAIV 142
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
V + +LI+L+ + G A+ +A C A TI V
Sbjct: 143 LRERVQAYRWAAVVVGFVGVLIMLAPHLEFGAGGAAGSIGALFACLAAVCTAAATIQVRR 202
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ LF + + + L + + + G+L + + +
Sbjct: 203 LTMTERTGAIVLYFFLFTSLLGLATLALGWRLPTLGEFGLFVLVGILGGIGQILLTESYR 262
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S V EYT L ++ F+ Q + IV A V +
Sbjct: 263 YGDASLVAPFEYTTMLWSLLIGWFVFGQLPQPAVALGGCIVAAAGVFTVWRERR 316
>gi|109948119|ref|YP_665347.1| putative membrane transport protein [Helicobacter acinonychis str.
Sheeba]
gi|109715340|emb|CAK00348.1| putative membrane transport protein [Helicobacter acinonychis str.
Sheeba]
Length = 302
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 105/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKVTADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A +++ +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVIGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISNPSVENVGPVEIIMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSVLGLVGMFIDIPFLSTGIHMPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILFSGLLIALPALLKEL 295
Query: 310 KN 311
KN
Sbjct: 296 KN 297
>gi|148258585|ref|YP_001243170.1| hypothetical protein BBta_7402 [Bradyrhizobium sp. BTAi1]
gi|146410758|gb|ABQ39264.1| putative membrane protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 356
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 79/293 (26%), Gaps = 4/293 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ P G + +L+G + + + L ++++ + AI+
Sbjct: 1 MTQSRSPLWPGVPLALISAVLFGASAPFAKLLLGSMPPQLLAGLLYLGAGIGLVAIIASR 60
Query: 76 GGL--SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ L+ + + L S + + ++
Sbjct: 61 AAFGAPAPEAPLRRHDLPWLAAVVLCGGVAGPLLLMLGLARTSAASGSLLLNLEGLATMA 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ V +E ++ ++ A I+ I+ + + A A +
Sbjct: 121 IAWVVFRENVDRRLMLGAFAILAGAAILAWNGTGVRIDAGGAFIAVACLAWGIDNNLTRK 180
Query: 194 EGFFIEMCVLAI--PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ AI A L +F +
Sbjct: 181 LSLADPVITAAIKGIAAGSTNVALAMVLGAHLPTPTTIAAAAAVGFLGVGVSLVLFMLAL 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + G AP + + +V +L +P+ ++++ + ++L
Sbjct: 241 RNLGAARTGAYFSLAPFIGAIIAVVLLGEPLTIQLIAAGMLMMVGLWLHLAER 293
>gi|332971089|gb|EGK10058.1| hypothetical protein HMPREF0476_0797 [Kingella kingae ATCC 23330]
Length = 290
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 98/297 (32%), Gaps = 14/297 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYF 74
++ +G+ ++ A +L+ + + ++ Q ++ E++ RVL+++ +
Sbjct: 2 TSTHKDPLGSAWIIVAAVLFTVMGILVKYAVQHFAMNSYELVFWRVLFAVIFLA------ 55
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ ++ F+ Y + +P+ L
Sbjct: 56 --TQAACTQKSFYTPRPMQHIWRGLAGTGGLLFYFYGIAHLPLATAITINTTSPLFLAIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVG 191
V +E L A + +L ++++ SG ++ +A +
Sbjct: 114 SLVLFREPPTRLIWFALITGLLGIIVLLQPTLDSGQIGHAIIALGGGVCSAYAYLKVREL 173
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S G VL A+ VV + + N + L L+G GL +
Sbjct: 174 SRAGEPAWRVVLYFSAVAAVVSAIPTTYFGWRGINGDNWLVLLGIGLSAMLAQLAMTRAY 233
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ TV + Y + + ++ L + + +++ + V+ LP S
Sbjct: 234 HVGRTFTVSALSYLNIVFGTLYGMWFLHETAGWADWLGIAMIIGSGVISSLPVQKKS 290
>gi|262403289|ref|ZP_06079849.1| permease [Vibrio sp. RC586]
gi|262350788|gb|EEY99921.1| permease [Vibrio sp. RC586]
Length = 297
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 82/275 (29%), Gaps = 1/275 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F LS+ +
Sbjct: 13 AAIWGGSFLFMRVAAHSFGPAFLIEARVAFAAISLFLVAQLLKKSLSIRQYWCHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L + +
Sbjct: 73 INTAIPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFFWHGTPLTRKALAGLLLGVTGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ I + SG L + A+ +Y A F A +V
Sbjct: 133 AVIVGWDIAAIGSGATLPIICAALAAGSYGLATNYTKQAPQISAFENAHGSMWAACIWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
N+ T + + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMLFIPLRQIPSNLEWTAVIALGVICTGLAYLIYFRLVKEIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+IL +P+ I +V+ ++ ++
Sbjct: 253 WGYWILDEPVGLNTLIGTVLVLAGTMLVTGFSLRR 287
>gi|229093496|ref|ZP_04224599.1| Permease of the drug/metabolite transporter [Bacillus cereus
Rock3-42]
gi|228689967|gb|EEL43771.1| Permease of the drug/metabolite transporter [Bacillus cereus
Rock3-42]
Length = 315
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 89/297 (29%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + L ++ + + R + + + S L
Sbjct: 14 YVIMLFVPLFWGGSFATAEHVLTEIPPITAATIRFGLAGCILIGIVF----MKSEWNTGL 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 70 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 129
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 130 KVGISLILSLIGVIVVITSGSLDTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 189
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 190 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 249
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 250 LGASKASMYLNLTPIVATSISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 306
>gi|296125903|ref|YP_003633155.1| hypothetical protein Bmur_0857 [Brachyspira murdochii DSM 12563]
gi|296017719|gb|ADG70956.1| protein of unknown function DUF6 transmembrane [Brachyspira
murdochii DSM 12563]
Length = 285
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 97/285 (34%), Gaps = 2/285 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M+ L V I +G P++ + + S L ++ +R ++ +F I+ +
Sbjct: 1 MLNVLLVIIGSIAYGFLPIFVKNIIAYNYSSLSIVFYRYFFTAVFLFIIILVTRKSFKIT 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + T + + + V ++
Sbjct: 61 KRQFIELLIFSITGLGLTFFFLSQSLLYISAGLSNMIHFGYPVVVLLIMIFLFKEKINIL 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + + +++L+ ++ + +L VT+ +Y A K S +
Sbjct: 121 KILSMLFAVSGIVLLTKVVRVESFLGIIYALVTTVTYGSYIVANKKCSFSSIDTIVSLFY 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I +L + + F+ F+ L F + YG+K+ S I
Sbjct: 181 MSLIVSLTFFIAGIFTNSLQVLNNINVFYNFIAVSLLCTIFSLGLLLYGVKKLGSSLASI 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ P + +S+FI + + I +++++ + ++ +
Sbjct: 241 LNMFEPTTTVAASIFIYNEDLTFNIVIGSVLIILSTITMVIGSKR 285
>gi|28379273|ref|NP_786165.1| transport protein [Lactobacillus plantarum WCFS1]
gi|254557406|ref|YP_003063823.1| transport protein [Lactobacillus plantarum JDM1]
gi|28272112|emb|CAD65016.1| transport protein [Lactobacillus plantarum WCFS1]
gi|254046333|gb|ACT63126.1| transport protein [Lactobacillus plantarum JDM1]
Length = 308
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/299 (9%), Positives = 82/299 (27%), Gaps = 12/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + WGI+ Q L ++ + + R+L + + +
Sbjct: 4 SREFKGIFLASISATFWGISGAVAQTLFDTTDINSIWLTGIRMLGAGIALLLVSLLTHVD 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + ++ + + + A+ + F+ PV V
Sbjct: 64 LWSIWRQPRDLLQIVAYTLLGLMPV--QFTYFLAVEASNAATGTILQFMGPVFIALWMLV 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
++ + +A + +L ++ H + L + S+ +
Sbjct: 122 AHRQLPTRAEGLAIICALLGSFLLVTHGNPQTLVISVWALIWGLLSGVSSATNTLLPTKL 181
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + H L + + F F
Sbjct: 182 LTKYDPMTVNTWSMLLGGILFNIVQPVWSIHIPLTMLNISKLTFVVLFGTLLAFLFFLQS 241
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + + V +++ PL + +V +L + + +++ + + + N
Sbjct: 242 LQYIRPTVVSLLDAFEPLSATIIAVVLLGVSFGWLDILGSVLIISTVFILAIGQGPNDR 300
>gi|317406124|gb|EFV86382.1| integral membrane protein DUF6 domain-containing protein
[Achromobacter xylosoxidans C54]
Length = 299
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 85/291 (29%), Gaps = 1/291 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +G + A L G ++ S V+ R ++ +F
Sbjct: 2 SPSSDRVGLAQMAAAMTLSGTLGVFV-LESGQSAWNVVFFRCVFGALSLFLYCWARGLLK 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L A+ + + + A ++ + + F +
Sbjct: 61 PGLFTARTLALALAAGAALVLNWVLLFSAYRLASISLATAVYNVQPFFLIGLGALFLGER 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+IA ++L L + G LS + +A + + V +G
Sbjct: 121 PTRGKLAWSVIAFAGLLLVLKLTDHSGGDAYLSGLLLGLGAAALYGITAVIVKRLKGIPP 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ L L V+ + + + + + ++ + I++ ++
Sbjct: 181 QVLALVQVTLGAVMLLPMADFQALPAAPLQWGYLVALGLVHTCLMYILMYSAIQKLPTTS 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + P + I+ + + +D + + ++ +A L
Sbjct: 241 TAALSFIYPAVAILLDLVVYDHRMDATQVLGVAMIFLAAAGVSLNWQWRLR 291
>gi|56478258|ref|YP_159847.1| hypothetical protein ebA4959 [Aromatoleum aromaticum EbN1]
gi|56314301|emb|CAI08946.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 318
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 78/269 (28%), Gaps = 8/269 (2%)
Query: 45 QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVH 104
+ V ++ R + + ++ L + G + AT L
Sbjct: 31 RLAATYPVPMLVWSRYALHFLLMVVLLA------PSMRLKLVTTRRPGRQIVRATCLLAV 84
Query: 105 WGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH 164
F I AL T+ F P++ + L ER+ L+ +A + + +L++
Sbjct: 85 TFFNITALQVMPLAETTAIVFAAPLMVTLMAGPLLGERIGPLRWVAVVTGFVGVLLIARP 144
Query: 165 SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL 224
G + +A +A I + +L AL + +
Sbjct: 145 GGALVAEGVALALGAAVSYAAYQILTRQLSPTETPVNMLFYTALVGTAATSLALPWLWQG 204
Query: 225 GNIPDTLFLIGYG--LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
L+ + + + A S + + Y L + F Q
Sbjct: 205 PMPGPLDALLIASLGIYGGCGHFLLIRAFRDAPASMLSPILYVQLLWATLIGWFGFGQLP 264
Query: 283 DTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
D + + A V+ + + +
Sbjct: 265 DGWGLVGILTIGGAGVLIAIDGRRTAQRR 293
>gi|332305260|ref|YP_004433111.1| hypothetical protein Glaag_0880 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172589|gb|AEE21843.1| protein of unknown function DUF6 transmembrane [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 288
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 104/282 (36%), Gaps = 9/282 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
IL G T L+++ + +S ++ R + + +F + G L+L + K
Sbjct: 13 LTVILLGATALFSKVI-PLSATDITFGRSIVACLALFTLVKMNGGKLTLAR-----KKDY 66
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ + ++A HW + A+ + + F PVI+V + F RL I++A
Sbjct: 67 FIGIGLGLLMAAHWVSYFAAMQYSSVSVGMIALFTFPVITVLIEPFFEGIRLVWQDILSA 126
Query: 152 LLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L++++ + ++ L + + VT + R + + + +
Sbjct: 127 LVVLIGIFLIVPEVSLQNDVTLGILVGVTSAVLYAFRNVCHRKYFSHYSGSLAMAYQTLV 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + F + F + + + + ++ + T ++ PL
Sbjct: 187 IFFCLSFFISPDLFNASGKTYVYLALLGTFFTAVPHALIATSLQHLRAKTFSLVACMQPL 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ ++ +L + + + +V+ A + + T K
Sbjct: 247 YGVILAIIVLDEQPNWQTYVGGLLVISAALYETVNTQKLHKK 288
>gi|228918334|ref|ZP_04081822.1| hypothetical protein bthur0012_55030 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228841323|gb|EEM86477.1| hypothetical protein bthur0012_55030 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 302
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 80/279 (28%), Gaps = 6/279 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ ++WG + + + L + L V R + + I +F +
Sbjct: 6 YFALIMLSLIWGGSFYFFKILVTDFNPLVVAFLRSTFGAITLIALIPFFRKSFRGNISFI 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF--LGSVFLKERL 143
+ L + + L T + + I +F + L
Sbjct: 66 PLFAVGILNTLIPWTLICFSEQKMTSNLASVLNATQPLWTMVLGILLFGIHSNRNQIIGL 125
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I +L + L + + ++ IA + F I + L
Sbjct: 126 FIGFIGILILSDIHLSNVFSVDSLNFFAMLIATFCYGLATHITKRYLKEMFMFQISLGTL 185
Query: 204 AIPALF---YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ ++ V++ + + + + ++ Y I++ +
Sbjct: 186 LVGSICSGGIVLFLEEPIQILTKISWHHIGALIGIGTFGSGIAYLLYFYLIQKGGPNFAS 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I Y P+ I +L + I I ++I + +
Sbjct: 246 ISTYLVPVSAIFWGYILLNENISWRLIIGLVFILIGVYI 284
>gi|224542680|ref|ZP_03683219.1| hypothetical protein CATMIT_01864 [Catenibacterium mitsuokai DSM
15897]
gi|224524390|gb|EEF93495.1| hypothetical protein CATMIT_01864 [Catenibacterium mitsuokai DSM
15897]
Length = 310
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 98/297 (32%), Gaps = 12/297 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N G L WG + QFL Q + + + S R+ ++ G+ +
Sbjct: 10 NIMKHFKRGVLLTLIGGTCWGFSGASGQFLFTHYQANPMWLTSMRMCFA--GLLITLFGA 67
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+K + K + +L + ++ A+ T + +++P+ +
Sbjct: 68 LTQKEAMKRLVSQEKDLLKTFGFGFVLMLCQFTYLQAINTSNAGTATVLQYLSPIYIMIF 127
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKT 187
+ K N ++ + +L + ++ H L I ++A ++
Sbjct: 128 VCLTSKRLPNKIEALCIVLALGGAFVIATHGRLNGLALTPTGLFWGIFCGFTAAAYSIYP 187
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + G + + ++ G + L + + + F ++
Sbjct: 188 KRLMAVYGSVPVTGIGMLFGGIVLLCAGKTWTLVPALDLAGVLATIGIIVIGTAVAFTLY 247
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ ++ P+ + + L P + + F ++++ + + LP+
Sbjct: 248 LQGVVDIGPVKASMIASIEPVSATLFAFVWLSTPFKGIDLVGFAMILVTIFLLALPS 304
>gi|297195640|ref|ZP_06913038.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197719018|gb|EDY62926.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 328
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 76/285 (26%), Gaps = 7/285 (2%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F + + WG + L + + +V R+ + + A+ L T +
Sbjct: 45 FAVLSAV-WGFSFLLIKVGTGAYAPFQVTFGRLFFGTAVLAVAMAVRRDRLPSGLRTWGH 103
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
L+ + + + + + V L R
Sbjct: 104 LTVAAFLLNALPFSLFAYSELTIPSTLAGICNATSPLWGMALSLVALSEDRPTRRRVAGL 163
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCV 202
I L ++ L SG+ A+A+ S + G +
Sbjct: 164 GIGFLGVLTVLGAWQGFSGLDFSGTAMALLASLSYPIGWIYVRRTLAGSSHSHLSLTGAQ 223
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + V +P + L I + +T ++
Sbjct: 224 LGLATVQLAVVTPLFTTVPDSFPLVPLLAVIALGVLGTGLALLIQYGLVAEVGPTTAQMV 283
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P++ + V +L + + + IV++ +
Sbjct: 284 TYFIPVIATAAGVALLDEHLAWNTPVGALIVLVGAALTQSRPKRT 328
>gi|90962472|ref|YP_536388.1| drug/metabolite exporter family protein [Lactobacillus salivarius
UCC118]
gi|301300493|ref|ZP_07206691.1| putative membrane protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90821666|gb|ABE00305.1| Transporter, drug/metabolite exporter family [Lactobacillus
salivarius UCC118]
gi|300851893|gb|EFK79579.1| putative membrane protein [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 310
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/307 (10%), Positives = 95/307 (30%), Gaps = 11/307 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G ++ A I WG+ + +++L + VSV ++ ++ S + Y
Sbjct: 2 QTKTHLKGVIYASLAGIFWGMAGIASEYLFQDQHVSVYWMMGVKMSLSALTLLGLAYYLD 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + +G+++FS LA + + + + + + +F
Sbjct: 62 G-KKIFLVLKSFKDILGIVLFSILGLAGVQFTYSMTVNYSNATVATIIQTLGILPVIFYS 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTI 188
++ K+ Q IA + ++ ++ + I + + + +
Sbjct: 121 AIIFKQLPGRKQWIATITALIGAWLLVTKGSFNQLAISKEAIIWGIFLMLTQAGNSVLPV 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L + + + +F
Sbjct: 181 DLLRRHNPTTISAWAMLVGGIVFEFIHPVWKSVPKFTPAVTLNMLFLIFIGTALSYYLFV 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + +++ PL + I K + + +V+ + + + + N
Sbjct: 241 KSLHLISATEATLLDTFEPLTAALLDFLIFKMQFNWAEILGSLLVISTVFILAVGSEENK 300
Query: 309 GKNKTKK 315
+ K+
Sbjct: 301 NSDPKKE 307
>gi|332284917|ref|YP_004416828.1| putative integral membrane protein [Pusillimonas sp. T7-7]
gi|330428870|gb|AEC20204.1| putative integral membrane protein [Pusillimonas sp. T7-7]
Length = 301
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 81/286 (28%), Gaps = 1/286 (0%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + LWG++ + + + + +++ R + + ++ L L
Sbjct: 11 MLLMALTVTLWGVSWIVMKHLVAFIGPFDLVMARYGLAFVVLLLILLATRQSLKFPPFWL 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
AV + + + F + + +
Sbjct: 71 TLGIAVFQTTAFQCLCQFALMTGGAGRVVMMAYTMPFWVVLFAWMLLGERPTRRHVLGFA 130
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L II M +G L L ++ + + M +A+
Sbjct: 131 CAGAGLLAIIAPWQGMGSLAGSVLALLGGVSWGLGTVLSKIMFQRHAPNVLNLTMWQMAL 190
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL + + + ++ + ++ ++R + G+
Sbjct: 191 GALLSFLVTLVLPQQDVVWAPDLFWGVAYMAVIASALGWWLWMSVVRRVSATVAGMSSLG 250
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+L +V + IL + ++ +V+ +V+ L +
Sbjct: 251 VPVLTVVLAWLILSEQPTSLELTGVALVMAGLVIVNLEGSRGKARR 296
>gi|320547443|ref|ZP_08041730.1| DMT superfamily drug/metabolite transporter [Streptococcus equinus
ATCC 9812]
gi|320447920|gb|EFW88676.1| DMT superfamily drug/metabolite transporter [Streptococcus equinus
ATCC 9812]
Length = 329
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 99/300 (33%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G+L V A WGI+ + Q+L ++V + R++ S +
Sbjct: 28 SKNVKGSLMVLIAGTAWGISGVSGQYLMAHGMNVDLLSCVRLIISGVIMTAIAALNQRE- 86
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +K + +FS L ++ ++ A+ + + ++ P++ + SV
Sbjct: 87 TFIKAVTSLKTLGSIAIFSLIGLVMNQYAYLRAIESTNAGTATVIQYMAPILVLAYVSVR 146
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--- 195
K+ +I+A +L IL ++ H + L++ + A
Sbjct: 147 KKQLPRGSEILAIILAILGTFVIATHGHLDGLAITLEGFAWGLFSAVTYSFYIILPAKLI 206
Query: 196 ----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + + + L + F + +F G
Sbjct: 207 REFDSFTVIGLGMLMGGVTFPILVNPWQYKLVLNPGNLLGLFGIIIVGTVFAYSLFLMGT 266
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + SV ++ + + + ++ A+++ L ++ K
Sbjct: 267 CIIGPVKGSLLAAIEPVSSVFFSVTVMHEIFYPMDFLGMIFIIAAVILISLRDLVVVNKQ 326
>gi|318059864|ref|ZP_07978587.1| integral membrane protein [Streptomyces sp. SA3_actG]
Length = 344
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/319 (7%), Positives = 70/319 (21%), Gaps = 41/319 (12%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
+S +G + + +G + + + L + L V+ RV + +
Sbjct: 1 MSGTGTRGRKGVGLGLALVSALAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVLLPVA 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+L + +A + A+ + ++ P +
Sbjct: 61 WRHRALPRARPAL--------LLGYGLFAVAGVQACYFAAISRIPVGVALLVEYLAPALV 112
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ + ++ +L + L + + + V
Sbjct: 113 LGWVRFVQRRPVSRAATAGVVLAVGGLACVVEVWAGLRFDALGLLLALGAACCQVGYFVL 172
Query: 192 SSEGFFI-------------------------------EMCVLAIPALFYVVWNGFSGGE 220
S G + E
Sbjct: 173 SDHGTEPASPAEPAGRTGPAQEPPSPLGVIAYGLLVGAVVLTFVARPWGMDWSVLGGRAE 232
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
L + + ++ ++ ++ V + +L +
Sbjct: 233 MDGTPVAAFLLLAWIVLVATVVAYATGVVSVRGLSPQVAVVVACLEAVVATVLAWVLLGE 292
Query: 281 PIDTVRTIVFGIVVIAMVV 299
+ + +V++ V
Sbjct: 293 HLSPPQLAGGCVVLVGAFV 311
>gi|254740942|ref|ZP_05198630.1| transporter, EamA family protein [Bacillus anthracis str. Kruger B]
Length = 308
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKKR 299
>gi|254456355|ref|ZP_05069784.1| permease, DMT superfamily [Candidatus Pelagibacter sp. HTCC7211]
gi|207083357|gb|EDZ60783.1| permease, DMT superfamily [Candidatus Pelagibacter sp. HTCC7211]
Length = 295
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 99/288 (34%), Gaps = 5/288 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+F+ + +G L + Q V ++ + L V ++LK
Sbjct: 8 IFLIIISVFFGTVMLSFLRIAQEDVNVYVAGFFRFFLGLVIIMPYIIKTNFAVLKTNHIK 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + +L + +L+ + FV P++ L FL E++ +
Sbjct: 68 KHLLRAALGLPAMLL-----YFSSLVLLPIEKVTAISFVVPLMVTILAVFFLGEKIYIYR 122
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A +L +LI+ + + + +SA ++ I + +LA +
Sbjct: 123 TLALILGFGGMLIIIRPGYVDISIGVYMILFSALLWSINIIITKKISKDDSAITILAHQS 182
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+F +++ + ++ ++L + + + ++ K +S +
Sbjct: 183 IFMSLFSFIIVLFFWETPSLKTFIYLFLAAICGTVLHLTLNHAFKLVDVSMTQPYSFLNL 242
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ + F+ + D I I+ I +++ + + K+
Sbjct: 243 VFASIIGYFVFGEIPDLYTWIGALIIFIGVLIISYREMKLDKEIIRKR 290
>gi|300717690|ref|YP_003742493.1| DMT Superfamily drug/metabolite efflux protein [Erwinia billingiae
Eb661]
gi|299063526|emb|CAX60646.1| Putative DMT Superfamily drug/metabolite efflux protein [Erwinia
billingiae Eb661]
Length = 304
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 93/282 (32%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + + ++ + + +R L +L + ++
Sbjct: 3 FLFPLLAVLIWSVNAIVSKVSAGAIDPAAISFYRWLLALLTLTPFVL----PSVWRNRQQ 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+LV + ++ YA + + P+++V + V L+
Sbjct: 59 ILKVWWKLLVLGLLGMVLYQSLAYYAAHSVTALFMGILNALIPLLTVLISIVLLRVAPTV 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+I +LL L+ + G+ L + ++Y +
Sbjct: 119 GIVIGSLLSFGGLVWLVSQGHPQQLLSHGMGQGELMMFAASTSYALYGVLTKRWAIPLPN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F + L L L + ++ +G+ R +
Sbjct: 179 WQSLYVQIAFGVLMLLPNFLMAKDVSLNLHNIPLVLFAGLFASILAPFLWIHGVMRMGAN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T I AP+ + +V L + + + I GI ++ +++
Sbjct: 239 TATIFMNLAPIFTAIIAVLFLHEQLHSYHYIGGGITLLGVIL 280
>gi|260222585|emb|CBA32292.1| hypothetical protein Csp_D31410 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 316
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 80/281 (28%), Gaps = 9/281 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + V A W + + L +V+ + L + + G + +
Sbjct: 37 RGVMLVVLAMFCWSVLDACNKQLMGQGILPKQVLFLQATVVLAMLVPVWIATRGRVVRTR 96
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + A + YA+ S + + LG FL E+
Sbjct: 97 QPW-------LHMLRACFIVTSAWCAAYAVSHLPLAEASAFLMTGSLFMLPLGVFFLGEK 149
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ L+ + +L++ A+ + A + I + G + V
Sbjct: 150 PHWLRWTGVAVGFGGVLVILQPGAEAFRPAALVALFGALMESMLGIVLKKYSGTEHPIAV 209
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + G G L G + ++ + + + S V
Sbjct: 210 LTWSQVACWLTFGLFTGFELPAVASNLWPLLPLVGFAAAGIYLGYFFAYRAGDASAVEAG 269
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ L + D G++V + + ++
Sbjct: 270 SFSLLLFSPALGAVFFSEAPDAAFWGGAGLLVCGIALVIIE 310
Score = 37.2 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 16/158 (10%), Positives = 39/158 (24%)
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
++ L+ SG + + + + +G + + +
Sbjct: 20 FMVSRFLMRWHALSGNTRGVMLVVLAMFCWSVLDACNKQLMGQGILPKQVLFLQATVVLA 79
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ + + +Y + L+ T L M+
Sbjct: 80 MLVPVWIATRGRVVRTRQPWLHMLRACFIVTSAWCAAYAVSHLPLAEASAFLMTGSLFML 139
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
VF L + +R + ++V L P
Sbjct: 140 PLGVFFLGEKPHWLRWTGVAVGFGGVLVILQPGAEAFR 177
>gi|225860781|ref|YP_002742290.1| membrane protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298229108|ref|ZP_06962789.1| membrane protein [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254968|ref|ZP_06978554.1| membrane protein [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502598|ref|YP_003724538.1| DMT superfamily drug/metabolite transporter [Streptococcus
pneumoniae TCH8431/19A]
gi|225727832|gb|ACO23683.1| membrane protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298238193|gb|ADI69324.1| DMT superfamily drug/metabolite transporter [Streptococcus
pneumoniae TCH8431/19A]
gi|327389633|gb|EGE87978.1| hypothetical protein SPAR5_1322 [Streptococcus pneumoniae GA04375]
Length = 298
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFTIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|91792945|ref|YP_562596.1| hypothetical protein Sden_1589 [Shewanella denitrificans OS217]
gi|91714947|gb|ABE54873.1| protein of unknown function DUF6, transmembrane [Shewanella
denitrificans OS217]
Length = 324
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 93/291 (31%), Gaps = 18/291 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVS-VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ++WG T + T + L + R L + + +
Sbjct: 10 LLLTSLAPLVWGSTYIVTTQMLPADLPLLASTLRALPAGLLLVMI----------YRKMP 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + V + A G + P++ + L ++ KE++
Sbjct: 60 IGHWWLKIALLGMLNIGVFFYCLFSAAYYLPGGTAAVIMSCQPLLVMALSALLFKEKITL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR-------KTIPVGSSEGFFI 198
+ IIA L + + ++ L + L IA + +
Sbjct: 120 VSIIALALGVAGIALLALKGNMVLNLQGIAFGLAGAASMALGLVLTKYWGKPANFSLIDF 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L + + + G L + + + + + I+ GI + T
Sbjct: 180 TGWQLTFGGMALLPITLYLEGIPPSLTEVNILGYSYLCIIGSVVGYMIWFRGIAHLPVVT 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +P+ V IL + + ++ + ++IA+++ + + +
Sbjct: 240 SSFLGFLSPISAGVLGYLILDEQLTPMQWLGVLAILIAILLNRVTSQKKAK 290
>gi|187777824|ref|ZP_02994297.1| hypothetical protein CLOSPO_01416 [Clostridium sporogenes ATCC
15579]
gi|187774752|gb|EDU38554.1| hypothetical protein CLOSPO_01416 [Clostridium sporogenes ATCC
15579]
Length = 293
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 100/285 (35%), Gaps = 12/285 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ G L+ + + S ++ R + VF + +S
Sbjct: 9 LLSMLIVGSIGLFVRSI-PFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNI----KAN 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S L+V+W A + Y+ PV+ + L + LKE L+ L+++
Sbjct: 64 LWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLC 123
Query: 151 ALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ L + + + + + +G + L
Sbjct: 124 IVAALVGLACIAGVSKKAGANDFVGILYGLGSAVLYATVIFLNKCLKDIKGIESSIVQLG 183
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ + + S G + P L LI + V+ ++ ++ +V +
Sbjct: 184 VSAISLLAYVLMSEGFKLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVAALS 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P++ I+ + L + + V+ I +++ A +
Sbjct: 244 YIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKK 288
>gi|254361516|ref|ZP_04977654.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
PHL213]
gi|153093034|gb|EDN74050.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
PHL213]
Length = 287
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 108/288 (37%), Gaps = 6/288 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL--- 80
+ G L A +L+G + L + + R++ +P + AI+ F +
Sbjct: 2 LKGILASLAANVLFGAVYYFAILLRPLEGEAMFGFRIVVVIPFILLAIILFKQQSAFADL 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +NP V +++ A V F++A Q SF Y + P+++V LG + K
Sbjct: 62 LQKIRQNPPLVLVILLLALNTGVQLWLFLWAPNHGQALQVSFGYLLLPIVAVALGKMVFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ ++ L ++ + + + +A +
Sbjct: 122 EHFTRLKWLSLLFAVIGVGSSLFFNSTISWATWVAGLGYPLYITLRRYFQ--INTLATFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + N +L GL++ F ++ ++ +G
Sbjct: 180 VELLLVLPVALYYLSQVEMTPIVAENPQIYFYLGLLGLVSGSAFILYILSSNLLPINVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ Y PL+M++ S I + +D I+ +++++ + + +
Sbjct: 240 LLGYVEPLVMLLISFAI-GEKLDANSYILMVCLLVSIGLLSWDSFRSK 286
>gi|325123647|gb|ADY83170.1| transporter, 10 TMS drug/metabolite exporter (DME) family
[Acinetobacter calcoaceticus PHEA-2]
Length = 295
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 88/285 (30%), Gaps = 1/285 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P L + WG +P+ L + + R L + + ++
Sbjct: 9 TQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASFFLLLLVMKKGIQ 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KD V +L ++ A+ + + + +F +
Sbjct: 69 PLNWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIISALLFKEQI 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ L L + ++++S L + +A F + +
Sbjct: 129 SFKQWLCILLGLCGAVLVVSGDHGFGVPSPYSLFIVLAAIAWGLYFNLYKKFALNYDALS 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ + + ++ E + ++ ++ + ++ Y +K L+
Sbjct: 189 MMCYIIWFGTIPLLFYSTHLPHEILHATWQANMSIVLLGIFPSAMAYVLWGYVLKNMPLT 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y +P++ + +V L + + + I+V ++V
Sbjct: 249 IASNFLYCSPIVAMSLAVVFLNEKPSMMVLLGGVIIVGSLVWMNW 293
>gi|269960353|ref|ZP_06174727.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834964|gb|EEZ89049.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 297
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 85/287 (29%), Gaps = 1/287 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ C +WG + L+ + +I RV ++ + +Y LS T
Sbjct: 9 LLCLAAIWGGSFLFMRVAANTFGPAYLIEFRVGFAAIALLLISIYLQKKLSFTAHTKHFF 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + + A T+ + + + K L
Sbjct: 69 IIGLFNTAAPFLFFAYAAQTLNASTLSILNSTAPIWGALIGFIWYRSPLTKKAILGMAIG 128
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
I + +++ + + L +A + +Y A F A+
Sbjct: 129 ITGVAVLVGWSAVKIGEEAILPIVASLLAACSYGIATNYTKNAPQIPAFNNAHGSMWAAV 188
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+V+ +I + + + + ++ + ++ + + P+
Sbjct: 189 IWVLPLLPFLPMRAEPTSIEWSSVVTLGVVCTGLAYLLYFRLVSEVGPASALSVTFLIPV 248
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ IL +P+ I +V+ ++ + + +K
Sbjct: 249 FGILWGYLILGEPVGFNTIIGTILVLSGTMLVTGFSPAAMLAKRKEK 295
Score = 36.8 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 41/137 (29%)
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
+ + + + + V ++ + + + +
Sbjct: 6 FFRLLCLAAIWGGSFLFMRVAANTFGPAYLIEFRVGFAAIALLLISIYLQKKLSFTAHTK 65
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
F I + F F+Y + ST+ I+ TAP+ + + P+ +
Sbjct: 66 HFFIIGLFNTAAPFLFFAYAAQTLNASTLSILNSTAPIWGALIGFIWYRSPLTKKAILGM 125
Query: 291 GIVVIAMVVYLLPTVIN 307
I + + V + + +
Sbjct: 126 AIGITGVAVLVGWSAVK 142
>gi|229171256|ref|ZP_04298846.1| Transporter, EamA [Bacillus cereus MM3]
gi|228612213|gb|EEK69445.1| Transporter, EamA [Bacillus cereus MM3]
Length = 316
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 102/305 (33%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 LIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSVHAIFMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + V ++V T
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTTAKQKR 309
Query: 310 KNKTK 314
N+ +
Sbjct: 310 ANEKQ 314
>gi|222097869|ref|YP_002531926.1| permeases of the drug/metabolite transporter (dmt) [Bacillus cereus
Q1]
gi|221241927|gb|ACM14637.1| permeases of the drug/metabolite transporter (DMT) [Bacillus cereus
Q1]
Length = 309
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 91/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 8 YVMMLFVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTSL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGISLMLSLIGVIVVITSGSINTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMSGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTGFLAGLSLYEDGWGKVGTFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + + IV+I + + + + + K
Sbjct: 244 LGASKASMYLNLTPIVATCISVVLYGAAVTWQQIVGMAIVLIGVYIATVQSNKDIKK 300
>gi|325204568|gb|ADZ00022.1| putative membrane protein [Neisseria meningitidis M01-240355]
Length = 300
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 89/298 (29%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + + + ++ + ++ ++L G G+ + K
Sbjct: 175 LAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSLSSAVYLSGIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQR 292
>gi|300855039|ref|YP_003780023.1| putative integral membrane protein [Clostridium ljungdahlii DSM
13528]
gi|300435154|gb|ADK14921.1| putative integral membrane protein [Clostridium ljungdahlii DSM
13528]
Length = 288
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 85/284 (29%), Gaps = 13/284 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G ++ + IL+G + + E + + +++ + + S+P +F I+
Sbjct: 3 KKGYIYSALSAILFGTCGIIIKIAFSEGANSINILTLQYMMSIPIMFLGILII----DSK 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ V F+ A + + + P + VF K
Sbjct: 59 ALKIGKKDLYHTAVLGIVGNTFMTIFYYMAFNYLDVSMVTILLYTYPAMVFIYSVVFQKM 118
Query: 142 RLNHLQIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+++ +I A + + + S + +A + A+ +
Sbjct: 119 QVSFNKIFALIATFIGCFLALGLNQSIKTFSTKGFMYGILAAVFYAFMNIYTEKKMDKLN 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + L +++ L +I + IK
Sbjct: 179 PLAVNFYSIIFSFLSLIIFKFPVDVFRQDLNGKLIVCIIILGVFCEIIPLTLLYAAIKHI 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
V I+ + S ILK+P+ ++ +V+ A+
Sbjct: 239 GSLKVSIIGNLEIPTAMFLSFLILKEPLSLLQVFGAALVIYAIY 282
>gi|229133925|ref|ZP_04262748.1| Transporter, EamA [Bacillus cereus BDRD-ST196]
gi|228649626|gb|EEL05638.1| Transporter, EamA [Bacillus cereus BDRD-ST196]
Length = 312
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 89/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L ++ F+ ++ S ++P+ + L +
Sbjct: 69 RIERKDWLR-----LLAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 124 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V + F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVTYCLFNVNTLTWPVDTPSWGSLAYSIVFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 244 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 303
>gi|62289580|ref|YP_221373.1| hypothetical protein BruAb1_0637 [Brucella abortus bv. 1 str.
9-941]
gi|265983745|ref|ZP_06096480.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|62195712|gb|AAX74012.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
gi|264662337|gb|EEZ32598.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 304
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 14/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 1 MNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWRG 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 56 QLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLPLPEAIAINYASPLITVILGAAILH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 116 EVVRFYRWSAVLIGLFGVMIIIWPRLTLFSAGSVGRDEAVGALAALGAAVMSAVAMMLVR 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ ++ V S + + N L+G G + +
Sbjct: 176 RLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTECY 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 236 RHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGFIIYRE 288
>gi|312868329|ref|ZP_07728529.1| putative membrane protein [Streptococcus parasanguinis F0405]
gi|311096074|gb|EFQ54318.1| putative membrane protein [Streptococcus parasanguinis F0405]
Length = 319
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 101/305 (33%), Gaps = 10/305 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
TM GTL A I WG++ Q+L + + + + R+++S +
Sbjct: 2 SKTMKGTLMTLIAGIAWGLSGACGQYLLAHGFTAIGLTTIRLVFSGAVLLLLAYLADQEK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
T ++ +L L + ++ A+ + ++ P+ + V
Sbjct: 62 VKAFLTDRSSYIPLLLFAFLG-LLMTQLTYLEAIDATNAGTATVFQYLCPIGVLAYSCVK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ +I + +L I ++ H L+ + ++ + I +
Sbjct: 121 DRVAPTVSEIFSMILAIAGTFLIATHGQLNQLAITPKGLAWGLVSAFAYALYIILPIQLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + + ++ H + + F + +F G
Sbjct: 181 QKWGSMLVIGIGMLIPGLVMIPFTGRRLFHGQYSMDNLMGLVGLVVIGTIFAYTVFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+ + + I +++ A+++ L ++ +
Sbjct: 241 TLIGPVKGSLLAAIEPISAVFFAFAIMNEHFFAIDFIGMAMILFAVLLISLKDLMIQKEK 300
Query: 312 KTKKS 316
++ K+
Sbjct: 301 ESCKT 305
>gi|299768465|ref|YP_003730491.1| DMT family permease [Acinetobacter sp. DR1]
gi|298698553|gb|ADI89118.1| DMT family permease [Acinetobacter sp. DR1]
Length = 294
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L +S ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLSPQDIAFLKTVIAFFFLSVFLFKVPVSQ 61
Query: 79 SLLKDTL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + I ++ + I + + ++F
Sbjct: 62 KIAFISNTPSKLSVFVQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G + LKE + I LL + + +++ L+ + ++ + Y I
Sbjct: 122 GRLVLKESIYIHSIAGTLLAVAGISLISWKGENSLLMLINASIAGTGYGLFSVLIKKFRL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLINFHSISFNSNIILGLIGLAVLPTILGFYCTTKALTY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ +V+
Sbjct: 242 LPAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIVLI 288
>gi|255528185|ref|ZP_05395009.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|296185733|ref|ZP_06854141.1| membrane protein, putative [Clostridium carboxidivorans P7]
gi|255508119|gb|EET84535.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|296049673|gb|EFG89099.1| membrane protein, putative [Clostridium carboxidivorans P7]
Length = 303
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 103/295 (34%), Gaps = 22/295 (7%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ + ++G++ L+++ L + ++S R L + + IV+
Sbjct: 3 NKSNILPYITALAMNFIFGLSFLFSKRALSVADPITLLSFRFLIAFLVMTLLIVF----- 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++K KN +++ S +++ F Y L + + P+ L F
Sbjct: 58 RVIKVNYKNKPIKWLVILSFIEPVIYFIFETYGLQRTASSVGGLMIALIPMAVTILAVYF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS----------------GIPLLSLAIAVTWSAYC 182
L E+ + Q I+ +L + ++++ + G + +
Sbjct: 118 LNEKPSIKQTISIMLSVAGVILIVVMGSSDKKESSILGVVLLLGAVFSAAFFNIISRKIS 177
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
I + F +C AI ++ S T L L +
Sbjct: 178 RKFNAIEITYFMMFSGAVCFNAISIANLLINKKLSYYLQPLSSTTFITSVLYLGILSSIV 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + +Y + + + S + + ++ I++ V +L + I ++++ +
Sbjct: 238 AYFLANYTLSKMEASRCSVFANISTIVSIIAGVIVLHESFYFYHIIGAIMILVGV 292
Score = 36.8 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 38/99 (38%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A + N P +I + F +YG++R S G+M
Sbjct: 44 FLIAFLVMTLLIVFRVIKVNYKNKPIKWLVILSFIEPVIYFIFETYGLQRTASSVGGLMI 103
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+ + + +V+ L + +TI + V +++ ++
Sbjct: 104 ALIPMAVTILAVYFLNEKPSIKQTISIMLSVAGVILIVV 142
>gi|325136832|gb|EGC59430.1| integral membrane protein [Neisseria meningitidis M0579]
gi|325202746|gb|ADY98200.1| integral membrane protein [Neisseria meningitidis M01-240149]
gi|325208742|gb|ADZ04194.1| integral membrane protein [Neisseria meningitidis NZ-05/33]
Length = 284
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 1 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 54 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 114 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 174 FTSVSIAAASLMCLPFSLALAQSYTVDWNVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 234 NVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 276
>gi|309379081|emb|CBX22383.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 284
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 84/283 (29%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + ++ + ++ R+L + A +
Sbjct: 1 MFYQILALIIWSSSFIAAKYAYGGIDPALMVGVRLLIAALPALPAC-------RRHIGKI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ + + L S + P++ VF+G F ++
Sbjct: 54 PREEWKPLLIAAFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLMMVFIGHFFFNDKAET 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 114 HHWICGAAAFAGVALLMAGGAEAGGEVGWFGCLLVLLAGAGFCAAMRPTQRLVARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 174 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGTVLSLLYLGLGCGWYAYWLWNKGMSRVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 234 NVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 276
>gi|304386728|ref|ZP_07368998.1| integral membrane protein [Neisseria meningitidis ATCC 13091]
gi|304339186|gb|EFM05270.1| integral membrane protein [Neisseria meningitidis ATCC 13091]
Length = 294
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 11 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGARLLIAALPALPAC-------RRHVGKI 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ S + L S + P++ VF+G F ++
Sbjct: 64 PREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 124 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 184 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGVGCGWYAYWLWNKGMSRVPA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 244 NVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 286
>gi|218895393|ref|YP_002443804.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
G9842]
gi|218542042|gb|ACK94436.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
G9842]
Length = 306
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 101/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 4 ICMLLVAVILWGTAIAPTKWVLESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 60 KKVPWQRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 120 NYWIGIILGTIGVLFITIPSKSADQEVSLIGDILILLSTFLFAFYTVLLKQPKQEQYLSN 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + G + + ++ ++
Sbjct: 180 EVFTTLTLIIGAVILLPFALVEILYYGLPKIETWKTGLSVIYLVIGATILAYWFWNKALE 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ I +S+ +L + + + +V+I +
Sbjct: 240 RVSASVSGLYLNALPLISIATSIILLNESLTWRVIMGASLVLIGV 284
Score = 41.0 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ + +P
Sbjct: 4 ICMLLVAVILWGTAIAPTKWVLESIQPFTLLFIRLFFAGGICMLFSFKQLQKSVVHKKVP 63
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S F LK+ I I
Sbjct: 64 WQRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRLNYWI 123
Query: 289 VFGIVVIAMVVYLLPT 304
+ I ++ +P+
Sbjct: 124 GIILGTIGVLFITIPS 139
>gi|167566542|ref|ZP_02359458.1| hypothetical protein BoklE_28551 [Burkholderia oklahomensis EO147]
Length = 307
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 67/279 (24%), Gaps = 6/279 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L + L R L + + + ++ +
Sbjct: 21 IWGSAFVAQRLSLAVIGPLLFTGLRFLLGAAVLVPLLRLNGAARAHCAAIARDRTLLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +LAV L + F + V+ +G F + ALL
Sbjct: 81 LVLGGLLAVSISMQQIGLQYTKIANAGFISSLYVVLVPIIGVFFRHRT-GAGTWLGALLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A + + + +
Sbjct: 140 AIGLYFLSVDEHFSMLYGDWFQLAGAIVIAVHVIAVGHLARRHDPLVLSFMQFVVCGVLC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ L G L + + + A + ++ +
Sbjct: 200 LALGLAIEPVSRTSIVHALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ L + + +++ ++V L
Sbjct: 260 AIAGWAALGETLSLRALTGCALMLAGLLVCQLLPGHARR 298
>gi|116252474|ref|YP_768312.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257122|emb|CAK08217.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 302
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/286 (11%), Positives = 89/286 (31%), Gaps = 9/286 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +++ A + + ++ + ++ E++ R L++ V+ +
Sbjct: 9 GAIYMSLAMAGFSASDALSKSVIAYMNAGEIMFLRGLFTSLLVYLIA------WKMGALR 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
M++F + +I AL S P++ F ++F E +
Sbjct: 63 SWRVMLQPMIIFRIICETLSAVTYITALGMMPIANASAILQSLPLVVTFGAALFFGEPVG 122
Query: 145 HLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ A L+ ++ ++I+ G +L S E + + V
Sbjct: 123 WRRWSAILVGLVGVMIIIRPGPEGFTAAALLCVAAVLTTAGRDLATRSISPEIPSLMITV 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + + + L+ +L + ++ ++S V
Sbjct: 183 ITAISASFFGALLIPVLGGWQPVSANALGHLVLASVLVLVGYQSVILAMRTGEISFVAPF 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
YT+ + + + D+ + IV+ + +
Sbjct: 243 RYTSLIFSSLLGFLFFAEVPDSWTLVGAAIVIASGLYTFYREAKRR 288
>gi|81427702|ref|YP_394700.1| putative drug transport protein [Lactobacillus sakei subsp. sakei
23K]
gi|78609342|emb|CAI54388.1| Putative drug transport protein [Lactobacillus sakei subsp. sakei
23K]
Length = 308
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 95/297 (31%), Gaps = 11/297 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFA 70
++ + G + A LWG++ +F+ Q V +S R L +
Sbjct: 1 MTNQLKPQNIAKGMFWATMASALWGVSGTILEFISQGQKVPATWFLSVRTLG-AGLILLL 59
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
I + ++ ++ + + F ++ T + +++P+
Sbjct: 60 IGAIKFKQDIFSIFKSKRLTAWLIAYALFGIMGNQYTFFMSIQTGNAAAATILQYLSPLF 119
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCF 183
V F+++ N + +I+ + ++ + + I L I +A +
Sbjct: 120 IVIGTLAFVRKWPNRIDLISFGIALVGVFLSITKGNIHTLTIPFNSLIWGILSGVTAAFY 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
P+ + + + + + N L L + F
Sbjct: 180 VVLPRPIVNEKSPILVLGWGMFISGILFNINRPFWQAPPHLNGSGIIAILAVILIGTVFA 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + A + + I++ P++ + S+ V +V++A+ +
Sbjct: 240 YLCLLHSLNFAPSTVISIVDAVQPVITFILSIIFFHSKFSWVEMSGAILVILAIYIL 296
>gi|325132868|gb|EGC55546.1| integral membrane protein [Neisseria meningitidis M6190]
gi|325138813|gb|EGC61364.1| integral membrane protein [Neisseria meningitidis ES14902]
gi|325142927|gb|EGC65286.1| integral membrane protein [Neisseria meningitidis 961-5945]
Length = 284
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/276 (10%), Positives = 79/276 (28%), Gaps = 3/276 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A G + +
Sbjct: 1 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHVGKIPREEWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + + V + A + L +
Sbjct: 61 LLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARAYHWICGA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L++ G L + + A + + F + +
Sbjct: 121 AAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPAFTSVSIA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + L + + +++ G+ R + G++
Sbjct: 181 AASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGVGCGWYAYWLWNKGMSRVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P++ ++ +V IL + + V + +V+ A +V
Sbjct: 241 SLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 276
>gi|313204355|ref|YP_004043012.1| hypothetical protein Palpr_1888 [Paludibacter propionicigenes WB4]
gi|312443671|gb|ADQ80027.1| protein of unknown function DUF6 transmembrane [Paludibacter
propionicigenes WB4]
Length = 307
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/303 (11%), Positives = 91/303 (30%), Gaps = 19/303 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + +F A +++GI ++ L +S + R+ + + ++
Sbjct: 1 MENKKLGGHIALFSANVIFGINNPISRALMPEILSPFTLTFFRLFGGMLLFWSVSLFTRK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + S L ++ F L S + P++++ L +
Sbjct: 61 ER------VAPKDILLLFCASFFGLTLNQLPFFVGLSMTSPIDASIVVTMLPILTMILAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFAR 185
+ +KE + ++ + ++ L++ S G ++ A +
Sbjct: 115 IIIKEPITLMKAVGVVVGASGALLLVFSSQTKHTGNGNFWGDLIVFSATFSFAIYLTVFK 174
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I S M + A + + L +
Sbjct: 175 NLISRYSPVTIMKWMFLFATIVCTPFCYKPLMQTDFTLLSANTYWRIGYMVVFATFLGYL 234
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ G K + +T+ + Y P++ + +V I + + +V + +
Sbjct: 235 LVPIGQKVLRPTTLSMYNYVQPIVASMLAVAIGMDTFGYEKALSGVLVFAGVYIVTQSKS 294
Query: 306 INS 308
Sbjct: 295 RAQ 297
>gi|261838557|gb|ACX98323.1| hypothetical protein KHP_1130 [Helicobacter pylori 51]
Length = 298
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 102/302 (33%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFVDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|219847933|ref|YP_002462366.1| hypothetical protein Cagg_1015 [Chloroflexus aggregans DSM 9485]
gi|219542192|gb|ACL23930.1| protein of unknown function DUF6 transmembrane [Chloroflexus
aggregans DSM 9485]
Length = 297
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 87/288 (30%), Gaps = 14/288 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
V A + WG + +L + + L + R+L S P + +G +
Sbjct: 13 IAMVVIAALSWGTIGVAVGWLYRLTETNSLSIGFLRLLLSAPVLLITARMLAGPQAFR-- 70
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+K + + + +F + P+ + L FL ERL
Sbjct: 71 -IKPRHRWVLALIGSAFAGYQVAYFAAIPYLGVAAAVLINICSAPIFTALLARAFLGERL 129
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEG 195
+A ++ ++ + + + +S V +
Sbjct: 130 RPSTGLAIGGAVIGAGLLAGGAPQVQSTNDLLVGAALALTAGFSYSLVVLGARLVAADYH 189
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + ++ S G + + + + + ++ G++ +
Sbjct: 190 PVVPVALSFTLGALLLLPVALSTGLAIDYPPLGWLVLGYLSVVPTALAYALYVRGMRTVR 249
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+T + PL + ++ +L + + ++V ++ +
Sbjct: 250 ATTAATISLLEPLGSALLAMILLGERFTATGIVGAVLLVASIAIIARR 297
>gi|15639970|ref|NP_219423.1| hypothetical protein TP0986 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189026209|ref|YP_001933981.1| hypothetical protein TPASS_0986 [Treponema pallidum subsp. pallidum
SS14]
gi|3323311|gb|AAC65943.1| conserved hypothetical integral membrane protein [Treponema
pallidum subsp. pallidum str. Nichols]
gi|189018784|gb|ACD71402.1| hypothetical integral membrane protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060343|gb|ADD73078.1| putative integral membrane protein DUF6 [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 294
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 80/291 (27%), Gaps = 11/291 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
GTL + C+ + + ++ + + ++ R L S + + +
Sbjct: 4 TEKQKGTLCLMCSSFCFSVMSVFVRLAGDLPSIQKAFTRNLVSTLISGSMLFRARTRVHV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + YA+ S ++P ++ +FL
Sbjct: 64 QDLPMLSLR--------TVCGTLAIVANFYAVERLTLADASLLSKLSPFFTILFSCLFLG 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA--YCFARKTIPVGSSEGFFI 198
ER+ Q++A + ++ S + A + V +
Sbjct: 116 ERIAPYQVVALCGAFAAGTLVVKPSHTLSHRVFPACIGAVGGMMTGAAHTCVRYLSTRGV 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E ++ F + + + + + F R
Sbjct: 176 EKFLVIFFFSFGSLLLLLPAFIWQYQPMSSPQVLTLWAAGVAVAGAQFFLTVAYRYAPKK 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++YT L K+ D GI++ A+ +Y+
Sbjct: 236 SIPIDYTHILFSTGIGFLYFKEVPDHWTVAGIGIIL-AIALYVFARERERK 285
Score = 39.5 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 38/135 (28%)
Query: 176 VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
+ G + L + +G ++ D L
Sbjct: 12 CLMCSSFCFSVMSVFVRLAGDLPSIQKAFTRNLVSTLISGSMLFRARTRVHVQDLPMLSL 71
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + Y ++R L+ ++ +P I+ S L + I + +
Sbjct: 72 RTVCGTLAIVANFYAVERLTLADASLLSKLSPFFTILFSCLFLGERIAPYQVVALCGAFA 131
Query: 296 AMVVYLLPTVINSGK 310
A + + P+ S +
Sbjct: 132 AGTLVVKPSHTLSHR 146
>gi|15965618|ref|NP_385971.1| hypothetical protein SMc00197 [Sinorhizobium meliloti 1021]
gi|307302737|ref|ZP_07582493.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
gi|307318585|ref|ZP_07598019.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|15074799|emb|CAC46444.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306895925|gb|EFN26677.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|306903101|gb|EFN33692.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
Length = 302
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 86/300 (28%), Gaps = 9/300 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S G +F+ A I + + + ++ +++ R L + V F
Sbjct: 3 SSANFRGIVFMCLAMIGFACNDALVKSVTGAMNTGQIMFMRGLLTTLMVVVVAYRFGAFR 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +I AL S P+ ++F
Sbjct: 63 PVRTIFRPAILLRIAME------ALASVTYISALGQIPLANASAIMQALPLAVTLGAALF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L E + + A ++ +LI+ + A+ V +C A + +
Sbjct: 117 LGEPVGWRRWAAIVVGFAGVLIVLRPGPEGFTAAALTVVACVFCTATRDLCTRRIGTDVP 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY--GIKRAKL 256
+ + +L + + T G + + ++ ++
Sbjct: 177 SLYITVTTSLVTTLVGAALIVPLGGWQPMSATSLSHIAGASVLLMLGYQTIVLAMREGEI 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
S + Y + L + V + D I++ + + + +++
Sbjct: 237 SVIAPFRYMSLLWSVTLGVVFFAETPDRWMLAGVAIIIGSGLYTFYRESKRGRQAVAQRA 296
>gi|182439590|ref|YP_001827309.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178468106|dbj|BAG22626.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 326
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/285 (10%), Positives = 82/285 (28%), Gaps = 14/285 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ T +LW + + E S + R++ + ++ GL
Sbjct: 16 RLRATAAACTTVVLWASAFVSIRSAGESYSPGALALGRLVTGALVLGAILLVRREGLPGR 75
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ ++ + + + P++ +G+ L E
Sbjct: 76 GAWRG------IITSGVLWFGLYMVALNWGEQEVDAGTAAMLVNIGPILMALMGARLLGE 129
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSE 194
L ++ + +++ L S +A A + +
Sbjct: 130 GLPRRLLLGMGISFSGAVVVGLAMSGHGTSSVLGVALCLLAAVAYALGVVSQKAALAHGS 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I AI A+ + + G E + + F + Y + R
Sbjct: 190 SLQINTFGCAIGAVACLPFTGVLVSEAADAPLSATLNMIYLGVFPTALAFTTWGYALART 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+G Y P ++++ + +L + + + + ++ + V
Sbjct: 250 TAGRMGATTYAVPAIVVLMAWVLLDEVPTPLGVLGGVLCLVGVAV 294
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 25/79 (31%)
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
G + L ++G + T ++ P+LM + +L + +
Sbjct: 73 PGRGAWRGIITSGVLWFGLYMVALNWGEQEVDAGTAAMLVNIGPILMALMGARLLGEGLP 132
Query: 284 TVRTIVFGIVVIAMVVYLL 302
+ GI VV L
Sbjct: 133 RRLLLGMGISFSGAVVVGL 151
>gi|52784386|ref|YP_090215.1| hypothetical protein BLi00573 [Bacillus licheniformis ATCC 14580]
gi|163119250|ref|YP_077806.2| hypothetical protein BL05044 [Bacillus licheniformis ATCC 14580]
gi|52346888|gb|AAU39522.1| putative protein [Bacillus licheniformis ATCC 14580]
gi|145902756|gb|AAU22168.2| putative membrane protein [Bacillus licheniformis ATCC 14580]
Length = 294
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 13/294 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITP-LYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G++++ A +WG + + + +E++ R + ++ + +
Sbjct: 2 KNTLLGSIYLALAASIWGGMYVVVKVVVAVIPPIELVWIRYVIAILTLLIVGLIKRQSWK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + ++V + Y + + + TP V + L
Sbjct: 62 IHK-----RDLLLIVVIGIVGNTISIVTQEYGTMLSSAQMGAIITSSTPAFMVIFARLLL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV-------GS 192
KE LN + + +L + +L + + I + ++ A + V
Sbjct: 117 KEPLNIKKGTSIILATIGVLFIVGNGHIDTSNQIGGISLLAAALTWALMSVLIKLVPNSY 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S + L L + + F +++ G++
Sbjct: 177 SSLLVTTYSTFVAIVALTPFVKPTAIFTSQLLDPKILGGLLYLGIVSTACAFLLWNRGLQ 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S+ G+ + PL+ + +L + I I +++I +++ +
Sbjct: 237 LLNASSGGLFFFFQPLVGTLLGWLLLGEKIGGTFWIGSFLILIGVLLVIKEKEK 290
>gi|254477788|ref|ZP_05091174.1| membrane protein [Ruegeria sp. R11]
gi|214032031|gb|EEB72866.1| membrane protein [Ruegeria sp. R11]
Length = 300
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 100/291 (34%), Gaps = 12/291 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G A + + + ++ + L V + +V+ R +L + +++ S L+
Sbjct: 5 GIALRIGATLFFTVMVVFVKLLADEVPLGQVVFFRSAVALIPLVLFLMWTRDFPSGLRTK 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + +L S ++ PV++V L L E++N
Sbjct: 65 -----RPLSHIARCLLGCAALFASFASLKYLPLAHASIIGYLAPVLAVVLARFLLGEQVN 119
Query: 145 HLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ A +L L +L++ L P L A A A I + S
Sbjct: 120 GMRWFAVVLGFLGMLVLVLPGLTAATLDQPYLIGAGLAFAMAIFTAGAKIQIRSLAQTEN 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ AL V G S + + ++L G G+ + + ++ +++S
Sbjct: 180 AGAIAFYFALTCAVAGGVSVFWGWVQPDFLQLVYLCGAGIAGGIAHIMMTLALQHSEISK 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ EY + + +++ + + D + +++ AM
Sbjct: 240 LAPFEYLSLIFAVLADFMLFRLVPDGAFYLSTLMILAAMWAITFKDRAKGR 290
>gi|115638735|ref|XP_797418.2| PREDICTED: similar to endonuclease-reverse transcriptase
[Strongylocentrotus purpuratus]
gi|115928587|ref|XP_001180087.1| PREDICTED: similar to endonuclease-reverse transcriptase
[Strongylocentrotus purpuratus]
Length = 846
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/310 (12%), Positives = 93/310 (30%), Gaps = 34/310 (10%)
Query: 27 TLFVFCAYIL--------WGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L I W + + V +++ R ++ + IV + +
Sbjct: 540 ILLPLFTAIWERKAVPGDWLLAGI-------VPPSQLLFFRGIFQILFTAPYIVRYRLPM 592
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +++ I Y+ + +P +
Sbjct: 593 RYPPKMVL------LILARGIIGTFLSFMCYYSYQAIPVATAKALIYSSPFFVAIFAGLC 646
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-------------LLSLAIAVTWSAYCFAR 185
LKE + +LL ++S++++ I + ++ AVT +A
Sbjct: 647 LKEHCSLWTTFFSLLTVISVVLVVQPPFIFGSSGDGETSIVGLMCAVVGAVTMAANVIVL 706
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + I I A+ ++ + G + L +I L
Sbjct: 707 RYMQMLRIHAQVIIFVYGFIAAICSAIFQTTGLEKWTNPGCGLERLIIIVMCLTGFLEQV 766
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ +K K S + I+ ++ + + I + VV + + + +
Sbjct: 767 SGTLALKTQKASVISIIRGNDVIVSFIFELLIFDMSPGAWTIVGVFGVVGSAIGMTVSSH 826
Query: 306 INSGKNKTKK 315
S ++K K+
Sbjct: 827 FASKRDKEKE 836
>gi|16124348|ref|NP_418912.1| integral membrane protein [Caulobacter crescentus CB15]
gi|221233030|ref|YP_002515466.1| drug/metabolite exporter family transporter [Caulobacter crescentus
NA1000]
gi|13421196|gb|AAK22080.1| integral membrane protein [Caulobacter crescentus CB15]
gi|220962202|gb|ACL93558.1| transporter, drug/metabolite exporter family [Caulobacter
crescentus NA1000]
Length = 297
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 101/295 (34%), Gaps = 12/295 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G L++ + + + + +FL + +R L + + I +
Sbjct: 4 SPNLRGALWMLASAVGFTVMTTLIKFLGDDYPAALQTFYRQLAGVLVLLPLI-------A 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
G+++F ++ + YA + F + V L + L
Sbjct: 57 RDWRGAFRTTRPGIVIFRSSAGVLALIMSFYAYQKLPLADANALSFTRTLWLVPLAGLVL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+E + +I AAL+ + +LIM L + +A+ FA +
Sbjct: 117 REPIGPRRISAALVGFVGVLIMLQPGAGGVEAWLGWPQLCALGAAFLFALTITGMKVMTR 176
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L A+ +V+ + PD L G++ + + G++ +
Sbjct: 177 DHTPFVLLVYAAVLGLVFAIPPALFVWRWPTWPDLGLLAAMGVIGTLTQGAYIKGMEAGE 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + ++YT + ++ + ++ T + IVV + + + +
Sbjct: 237 AAVMAPVDYTRLVFAVIVGFLLFQEVPRTATVVGAVIVVGSTLFISWREHQLAKQ 291
>gi|319784457|ref|YP_004143933.1| hypothetical protein Mesci_4774 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170345|gb|ADV13883.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 302
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/302 (11%), Positives = 90/302 (29%), Gaps = 7/302 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + +G + V + ++ +T + T+ + L +I R + F +++
Sbjct: 6 AATDTAAERTLGIILVSSSAAVFALTGVLTKSI-HADPLTIICWRGFVGAILISFYVLWR 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + A A+ FI A + Y P ++ L
Sbjct: 65 RHRSGGRE----TLRLGWRGWLLAVEGALASIAFISAFKFTFVANVAVIYATAPFVTALL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
V +E ++AA + + + IM + + + + +
Sbjct: 121 AWVLTREPFRLQTMVAAAVSLCGVAIMVWSGFGTGNLFGDGLALLMTIGSGLYMIMVRAF 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ A V F L G S + ++ G +
Sbjct: 181 RDTPVVWAGAVSAFLLFVLGWFVTDPLAVSPRDAVLLTTFGASFALSSIL--WTEGARLI 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ G++ I+ + L + I +V+ A+ + + + +
Sbjct: 239 PPAESGLLGSAEVPFAILFAFLFLGEIAPAASMIGGAVVLTAVFAHAGRDWLMARSQRMA 298
Query: 315 KS 316
+
Sbjct: 299 SN 300
>gi|303327016|ref|ZP_07357458.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
gi|302863004|gb|EFL85936.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
Length = 293
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/275 (9%), Positives = 88/275 (32%), Gaps = 8/275 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A +L+G++ ++ + + ++ R +++ + +
Sbjct: 19 LLRMHAATVLFGLSGIFGKLCACTPAM-LVCGRAFFAVGALSLLCLARRHAPWQGLRCR- 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ L S T+L VH+ F + + + + P + ++ +E+ +
Sbjct: 77 ---ELAGLALSGTLLTVHFVTFFMGIQLGGVAVGTLGFACFPGFTTLFEALAYREKPSGR 133
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L+ L ++T + + A V A ++
Sbjct: 134 EYACMFLVSCGLALITPSFSLADATTAGLAWGVLSGAVYALVAIANRRTATNMSGTQACW 193
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ V F+ + + ++ + + + ++ + K ++
Sbjct: 194 WQNLVIIVCLLPFTAEQFSSVSDLDWLWIACLGLICTALAYSLYVSSLAALKARRAAVII 253
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
P+ I+++ + + T ++V ++
Sbjct: 254 SLEPVYAILAAWLLFGETPGPRMTAGGLLIVGTVL 288
>gi|302389206|ref|YP_003825027.1| protein of unknown function DUF6 transmembrane
[Thermosediminibacter oceani DSM 16646]
gi|302199834|gb|ADL07404.1| protein of unknown function DUF6 transmembrane
[Thermosediminibacter oceani DSM 16646]
Length = 303
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 85/294 (28%), Gaps = 20/294 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + WG + ++ L+ + + + R + + + +
Sbjct: 6 KAYVSLLGVAFFWGTSFAVSKIGLKSLPPMYLAILRFSIASIIFYALL-----RKNYYGY 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ + ++ ++ L T+ +P+ + L S+ ++
Sbjct: 61 KIRQKDKPLLWFLGVLGISSYFYVQYTGLSLTTTVNTAIIIATSPIFTALLSSLLFRQER 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGIP-------------LLSLAIAVTWSAYCFARKTIPV 190
L + +L+ + + + G +L ++A + R
Sbjct: 121 LSLNKLLGILMGFTGIFLIFAGGTGVSFGSETLRGDLLILCNSVAWAFFTVMGKRLVDAY 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I L F +G L + F + ++ G
Sbjct: 181 DPFVVIAHINIYGTITMLPLAFSRTFLNL-LMSIGLETWLAALYLALTCSVFGYYMWYRG 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ S + Y PL + + LK+P + + +++ + V L
Sbjct: 240 VRVLGASRTAVFNYVNPLFAVTIGILFLKEPWNLFTLVGGAAILLGVYVASLKG 293
>gi|294498931|ref|YP_003562631.1| Drug/Metabolite Exporter family transporter [Bacillus megaterium QM
B1551]
gi|294348868|gb|ADE69197.1| transporter, Drug/Metabolite Exporter family [Bacillus megaterium
QM B1551]
Length = 303
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 84/298 (28%), Gaps = 13/298 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFA 70
+ S G L V +WG++ Q+L + + ++ R+L S +
Sbjct: 1 MEGVQTSSRRAWGLLLVIIGATMWGVSGTVAQYLFQHKSFNAEWLVVVRMLVSGLLLLAI 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
S ++ + +L+F + + A+ + + +P+
Sbjct: 61 A---SKQRNIFAIWKTKEERTSLLLFGVIGMLGVQYTYFAAIEAGNAATATVLQYTSPIF 117
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCF 183
+ +V ++ +++I+ L+I + L I ++ +
Sbjct: 118 IIGYLAVQARKWPVKVEMISVALVITGTFFLATSGNFNELSITGWALFWGIGAAVTSAFY 177
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + + + + + L
Sbjct: 178 TLQPKRLLAKWSSIEVVGWGMVIGGVSFSFIHPPWHIAGEWSLLSLCAVLFVVIFGTLIA 237
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F + +K S ++ PL SV L + +++ + +
Sbjct: 238 FYCYLESLKHISASEAIVLASAEPLSAAALSVLWLHVTFGWTEWLGTILIIATVFLLS 295
>gi|153208952|ref|ZP_01947165.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|212218746|ref|YP_002305533.1| transporter, drug/metabolite exporter family [Coxiella burnetii
CbuK_Q154]
gi|120575610|gb|EAX32234.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|212013008|gb|ACJ20388.1| transporter, drug/metabolite exporter family [Coxiella burnetii
CbuK_Q154]
Length = 305
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/289 (10%), Positives = 78/289 (26%), Gaps = 3/289 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ L +F +LWG+T + L +S + R + + I
Sbjct: 4 SVRAHLALFFITLLWGLTFPLIKDALGSISPSLFVVLRTSVASLILLPVIFLQRK--KTT 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+K +G + + I + + S + +
Sbjct: 62 FTMIKWTLVLGFFQSATYVFQSIGLESISSADSAFITALSVVVVPFLALIFLKSKPRWFD 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L + + I+ I + G + +E + +
Sbjct: 122 FVTALLCLGGIFILTGANIFNMKGGDFWTLGCAVAYALYIVTLQAFSKKLKAEDTILALS 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ +L + + F L VF + + +S +
Sbjct: 182 YQILFSLIFPLLTAFYKTTASIFSWPVIIAVLFCAIFATGLVFYLQLRYQRYIPVSRAVL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ + + + I I +++++ V+ L S +
Sbjct: 242 IYAFEPIFAALFGYLLNGEAIYLNTVIGGFLILVSFVLSELFPSKKSSQ 290
>gi|118479579|ref|YP_896730.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|229186663|ref|ZP_04313824.1| Permease of the drug/metabolite transporter [Bacillus cereus BGSC
6E1]
gi|118418804|gb|ABK87223.1| permease, drug/metabolite exporter family [Bacillus thuringiensis
str. Al Hakam]
gi|228596922|gb|EEK54581.1| Permease of the drug/metabolite transporter [Bacillus cereus BGSC
6E1]
Length = 311
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 89/297 (29%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + L ++ + + R + + + S L
Sbjct: 10 YVIMLFVPLFWGGSFATAEHVLTEIPPITAATIRFGLAGCILIGIVF----MKSEWNTGL 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 66 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 125
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 126 KVGISLILSLIGVIVVITSGSLDTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 186 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 246 LGASKASMYLNLTPIVATSISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 302
>gi|257387582|ref|YP_003177355.1| hypothetical protein Hmuk_1533 [Halomicrobium mukohataei DSM 12286]
gi|257169889|gb|ACV47648.1| protein of unknown function DUF6 transmembrane [Halomicrobium
mukohataei DSM 12286]
Length = 324
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 70/292 (23%), Gaps = 9/292 (3%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
A +L+G T + + L+ L ++ R + + V + +LL T +
Sbjct: 12 AVASVLFGGTFVAAKAGLDYFPPLLFVALRFDVASVVLIGYAVATTPREALLPRTRGDVV 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV--------FLGSVFLKE 141
+ A L F T FS L +
Sbjct: 72 GIVATGIFAIGLTNALLFVGQQYATSAVGSIVFSLNPILTPVFAAVLLADDRLSARGSAG 131
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L + ++ ++ G +L R SS
Sbjct: 132 MILGLLGVGLVVSPDPANLLAGGFGKAILFAGAVSGALGSVLIRWADGELSSSVRTAWGL 191
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + + + + A +
Sbjct: 192 PLGAGLTHALSRAAGESVGAITWSGEALLALGYVGVFAGAIAYIAYFELLDTAGPIRANL 251
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ Y P++ + +L + I F + V +V + +
Sbjct: 252 VFYVVPVVATLGGWALLDETIAPTAVAGFLTIFAGFAVLGSQSVDATAVRRR 303
>gi|114765525|ref|ZP_01444633.1| hypothetical protein 1100011001329_R2601_12870 [Pelagibaca
bermudensis HTCC2601]
gi|114542118|gb|EAU45150.1| hypothetical protein R2601_12870 [Roseovarius sp. HTCC2601]
Length = 289
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 87/285 (30%), Gaps = 10/285 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+G LF+ A L+ I + + + E L + +
Sbjct: 1 MLGALFMCAAMTLFAIEDALFKSVTPALPPGEATLIFGLTGTAIYVLLTLRAREPVLHPA 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + +L +TS P++ ++ L E+
Sbjct: 61 ILRPSLMMRTVFEIIGRLFFA------LSLAYTPLAITSSILQAAPLVVTAGAALLLGEQ 114
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + IA + + +L++ + A+ FA + + +S +
Sbjct: 115 VGPRRWIAMAVGFIGVLMILRPTPDAFRPDALLAVAGMIGFAMRDLFTRASPPAVSTNQL 174
Query: 203 LAIPALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +V L + L+ G + + + ++ ++S V
Sbjct: 175 GVLGFAVLIVAGLIMLPFDPAPPRLPTGTELGRLLLTGAVGVAAYTALTRAMRVGEVSVV 234
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
Y+ L+ + + + D ++VI+ V LL +
Sbjct: 235 APFRYSRLLVALTFAFLFFGERPDLWTLAGGLLIVISGVYTLLRS 279
>gi|319652997|ref|ZP_08007102.1| hypothetical protein HMPREF1013_03717 [Bacillus sp. 2_A_57_CT2]
gi|317395346|gb|EFV76079.1| hypothetical protein HMPREF1013_03717 [Bacillus sp. 2_A_57_CT2]
Length = 312
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 98/310 (31%), Gaps = 18/310 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + A ++WG + + ++ L R + + + +V
Sbjct: 5 TNKKYGFLMLILANMIWGGNFVIGRIGVDYFPPLLFSLMRWIIAFLLLTPFMV----KKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +L+ + T +A + +AL S TP+ L L
Sbjct: 61 KRDWNIIWEHKRILLLLAVTGVAGYNTIIYFALQYTTSINASVVNSTTPLFIAILAIFIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARK 186
+E+L Q LL + +L + I + I + +
Sbjct: 121 REKLLAHQTAGILLSVFGILYIISKGSIEMFLSWKINAGDLYVLAAVIMWASYSVIGKKY 180
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + F+ + + + + + + L L + F
Sbjct: 181 SNVLPVLTSFYASSFIGILLLVPLSLIEYLVMEKTPVFTLTSAGILLYVGFLASIMAFLS 240
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+++G+ + G+ P+ I+ ++ ++ + + I GIV + +V+ T+
Sbjct: 241 WNFGVSLIGAAKAGVFLNLLPIFAIIFALCFTEEKLYLYQIIGGGIVTLGVVISSKKTLR 300
Query: 307 NSGKNKTKKS 316
+ KS
Sbjct: 301 FKNHVQENKS 310
>gi|254805362|ref|YP_003083583.1| conserved hypothetical inner membrane protein [Neisseria
meningitidis alpha14]
gi|254668904|emb|CBA07079.1| conserved hypothetical inner membrane protein [Neisseria
meningitidis alpha14]
Length = 300
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 90/298 (30%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + A + + ++ + ++ ++L G G+ + K
Sbjct: 175 LAGEPGWRVVFYLSATGVAMSSVWATLTGWHTLSLSSAVYLSGIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQR 292
>gi|125777585|ref|XP_001359659.1| GA18783 [Drosophila pseudoobscura pseudoobscura]
gi|54639407|gb|EAL28809.1| GA18783 [Drosophila pseudoobscura pseudoobscura]
Length = 347
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/294 (10%), Positives = 88/294 (29%), Gaps = 15/294 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + + L V+ +E+ + R + L ++Y +
Sbjct: 36 LGIILATLSSLFFSLCSVIVKGLVDVNPMELAAFRFVGVLLPTIPILIYTRQ--PVFPQG 93
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + ++ + F L + S FV FL +
Sbjct: 94 TRVILLMRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCTMFNVI 153
Query: 145 HLQIIAALLIILSLLIMTLHSGIP-------------LLSLAIAVTWSAYCFARKTIPVG 191
+ I +++++ P +A + +
Sbjct: 154 TINITLVGVVLITRPPFVFGETTPPPDEQLTGRPYDIWGPVAAFSSTLFGANVYILLRAL 213
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ F + M AL Y + S G + D ++ G+ + + + +
Sbjct: 214 KNLHFSVIMTNFGATALVYTLIVCASIGAVCWPSCGRDRWLVLVLGVFSFLGQILLTLSL 273
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + V I + + + + + +V+ ++++ L
Sbjct: 274 QIEQAGPVAIARCADIVFAFIWQMIFFGETPNGYSLFGALMVISSVILTALKKW 327
>gi|110637711|ref|YP_677918.1| DMT family permease [Cytophaga hutchinsonii ATCC 33406]
gi|110280392|gb|ABG58578.1| permease, DMT superfamily [Cytophaga hutchinsonii ATCC 33406]
Length = 302
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 92/296 (31%), Gaps = 15/296 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
N+ +G C+ + + + ++ + ++ R+ +SLP V +
Sbjct: 5 PNSIQKQYLGVFLGVCSAACFSTKAIMVKIAYMYGADTVFILFLRLFFSLPLYIILAVIY 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
S + + + +++ + F L L F+ P + V L
Sbjct: 65 SKN---ADMKITRIQWIWIVLLGFIGYYISSLFDFMGLSYISASLERLILFIYPTLIVVL 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFA 184
++ +L +A +L + + + L + G L+ +
Sbjct: 122 NTLLFGSKLQRKDYLALVLTYIGIFFIYLGNTESTTENLIKGSILVFACALTYAFYIVGS 181
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ IPV ++ + +++ ++ + + + +
Sbjct: 182 GRLIPVIGAQRYTAYAMLVSTLSVMIHQGLVNGIPDLTHTSSEILWVGFAMAIIATVIPS 241
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ IK I+ P+ I + ILK+P + I ++ + +
Sbjct: 242 LTLAQSIKLIGTEKSSIIATLGPVFTIALANIILKEPFTLRQGIGTAFIITGVWIV 297
>gi|315917556|ref|ZP_07913796.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691431|gb|EFS28266.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 327
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 95/302 (31%), Gaps = 7/302 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ E ++ F F A +L+ + +++ L EQ+S + + S + G+ +
Sbjct: 1 MEGEKTMNNKIISIFFAFIAAMLYALNIPFSKLLLEQISPVFMASFLYFGAGIGMLCLSL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G K T K ++F + + L S V +
Sbjct: 61 LKKGNKEQNKLTKKELPYTLGMIFLD---ILAPISLMVGLKWISPTNASLLNNFEIVATS 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIP 189
+ F +E+++ A LLI LS ++++L A+ +
Sbjct: 118 CIALFFFQEKISSKMWAAILLITLSSVLLSLEEQTNFSFSYGAIFILLACIFWGMENNCT 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S +++ VL + + + LI L +
Sbjct: 178 RMLSSKNIVQIVVLKGICSGFGSFIVAFVIGEHLPHFFLILIILILGFLSYGLSIFFYVK 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K + P + S I ++ + + I+++ ++ +L T+
Sbjct: 238 AQKELGAAKTSAYYSINPFIGTFLSFLIFQEKLSKYYFLALFIMILGTILVILDTLFIKH 297
Query: 310 KN 311
K+
Sbjct: 298 KH 299
>gi|307102516|gb|EFN50789.1| hypothetical protein CHLNCDRAFT_142523 [Chlorella variabilis]
Length = 500
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/308 (12%), Positives = 100/308 (32%), Gaps = 19/308 (6%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYF 74
++A+ M+G F + + L+ + + + V ++ R + +
Sbjct: 61 KHATRREMIGLAFNALSTLFGTGMSLFAKISGSQGIGVFNIVLTRS------LILVLFTG 114
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + +LV + A+ S F++P+ L
Sbjct: 115 PELFYHRVNPFHDRRRRWLLVLRGVLGFCSVSSLYLAVALLPLADASVLSFLSPIFVAAL 174
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCF 183
G + LKER + ++ + ++ ++++ + I A +
Sbjct: 175 GPIILKERSSTGTLLGIPVAMVGVVLVAQPGIVFGGEDHISKLGVAVGITQACFNALART 234
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + GSSE + I + + P L+ GLL
Sbjct: 235 CVRALSQGSSERMSSIIFGQGIISCLGAAILCTTTKSFQVPTEAPVWGALLAGGLLGYLY 294
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ G++RA+ + M Y + + I++ +F+ D++ + I+ ++
Sbjct: 295 QLALTAGLQRARAAPAVAMSYLSVIWGILADIFVFHDLPDSLSLVGAAIICLSSFSVAFS 354
Query: 304 TVINSGKN 311
+
Sbjct: 355 QKRAGSRK 362
>gi|83717290|ref|YP_438786.1| hypothetical protein BTH_II0586 [Burkholderia thailandensis E264]
gi|257141867|ref|ZP_05590129.1| hypothetical protein BthaA_22039 [Burkholderia thailandensis E264]
gi|83651115|gb|ABC35179.1| membrane protein, putative [Burkholderia thailandensis E264]
Length = 307
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 66/279 (23%), Gaps = 6/279 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L + R L + + + ++ +
Sbjct: 21 IWGSAFVAQRLSLAVIGPFLFTGLRFLLGAAVLAPLLGLNGAARAHCAAVARDRARLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +LAV L + F + V+ +G F + ALL
Sbjct: 81 LALGGLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPIIGVFFRHRT-GVGTWLGALLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A V + + +
Sbjct: 140 AIGLYFLSVDEHFSMLYGDWFQLAGAIVIAAHVIAVGHLVRRHDPLVLSFMQFVVCGALC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ L G L + + + A + ++ +
Sbjct: 200 LALGLAIEPIDRSTLVRALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ L + + +++ ++V L
Sbjct: 260 AIAGWAALGETLSLRALAGCALMLAGLLVCQLLPGHARR 298
>gi|307701982|ref|ZP_07638990.1| membrane protein [Streptococcus mitis NCTC 12261]
gi|307616627|gb|EFN95816.1| membrane protein [Streptococcus mitis NCTC 12261]
Length = 298
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 102/298 (34%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + F +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMFLAYVTAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L T K + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 MLAFLTDK-KSLLSLLIFALIGLFLNQFAYLTAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
K +I++ +L I ++ H + LS+ A + + I +
Sbjct: 121 DKVAPTLGEIVSIILAIGGTFLIATHGQLDQLSMTPAGLFWGLFSSLTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQTAIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + + +++ A+ + L ++
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLLLEK 298
>gi|229158039|ref|ZP_04286110.1| Permease of the drug/metabolite transporter [Bacillus cereus ATCC
4342]
gi|228625492|gb|EEK82248.1| Permease of the drug/metabolite transporter [Bacillus cereus ATCC
4342]
Length = 315
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 90/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 14 YVMMLFVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTSL 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 70 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 129
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 130 KVGISLILSLIGVIVVITSGSMNTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 189
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 190 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 249
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 250 LGASKASMYLNLTPIVATGISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 306
>gi|227511294|ref|ZP_03941343.1| DMT superfamily drug/metabolite transporter [Lactobacillus buchneri
ATCC 11577]
gi|227523503|ref|ZP_03953552.1| DMT superfamily drug/metabolite transporter [Lactobacillus
hilgardii ATCC 8290]
gi|227085447|gb|EEI20759.1| DMT superfamily drug/metabolite transporter [Lactobacillus buchneri
ATCC 11577]
gi|227089268|gb|EEI24580.1| DMT superfamily drug/metabolite transporter [Lactobacillus
hilgardii ATCC 8290]
Length = 305
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 87/294 (29%), Gaps = 11/294 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + +LWG++ Q L VS ++S R+L S + +
Sbjct: 5 KVRGIVLAVAGPLLWGVSGTTAQALFTHADVSSNWLVSVRMLISGILLVLYGLLTDR-KQ 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L A+ +L FS +A + A+ + F++P + ++
Sbjct: 64 NLMIWHHWRDALYLLFFSFVGMAASQYTYFKAIDYGNAATATILQFLSPAFIIIYLALST 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVGS 192
+ + I++ ++ + +++ H + S + SA + +
Sbjct: 124 RRWPRRIDILSLVMALTGTILLVTHGQLTTLAIPVRGFSWGLLTAMSATLYTLLPRKLLG 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + F + F ++
Sbjct: 184 KYGSIPVVGWSMLIGGIAFSIYYRVWTHMPDFNLATYGRIGFVVIFGTMFAYLFFLGSLQ 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+T ++ PL S+ L TI +++ + V T+
Sbjct: 244 FITATTASVLGCFEPLSATFLSIVFLGVQFGVPETIGAILIIGTVFVQSWATMK 297
>gi|224419291|ref|ZP_03657297.1| hypothetical protein HcanM9_08473 [Helicobacter canadensis MIT
98-5491]
gi|253828143|ref|ZP_04871028.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313142791|ref|ZP_07804984.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511549|gb|EES90208.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131822|gb|EFR49439.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 291
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 98/288 (34%), Gaps = 13/288 (4%)
Query: 25 MGTLFVFCAYILWGITPL--YTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G L++ A I +GI P+ +S ++ R L S +F +Y L L K
Sbjct: 9 IGILWIISASIAYGIMPIWSVISQNNGISTDFILFFRFLCSAFLLFLWALYRQISLKLTK 68
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + ++ +L L+ Y + P+I + +FL+++
Sbjct: 69 LQYLQ-----FFFLGGILYIIQSFAYLDSLRYIPASLSVLIYHIYPIIVALIALIFLRQK 123
Query: 143 LNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L + + L L I+ S ++ I + +
Sbjct: 124 LQAKTLFSLFLCFAGLAIILQPPKDLELSVYGVILSLIGALFYGLYVVFSKSYTSNLSSV 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ AL + + + + L + F + G+ R +
Sbjct: 184 VYSFYICLFAALMILGFMIPNPPQFDNFNINGILSLLGLTFISTLFPMMAYFLGMPRINV 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ PL+ ++ S+++L + ++ ++ +++ +V +
Sbjct: 244 TKTAILGMIEPLVGVLLSLWLLGENLNLLQYFGGFLILFGSLVLFIKR 291
>gi|254683181|ref|ZP_05147042.1| transporter, EamA family protein [Bacillus anthracis str.
CNEVA-9066]
Length = 306
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + + LL F ++ V+ L +FL
Sbjct: 62 KQHIKQSSL----AGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 118 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 178 LLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKKR 297
>gi|228899266|ref|ZP_04063529.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis IBL
4222]
gi|228860297|gb|EEN04694.1| Transporter, drug/metabolite exporter [Bacillus thuringiensis IBL
4222]
Length = 310
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 99/294 (33%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 7 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLTKKQNIF 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 67 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + + + + I + L A+ ++ Y ++
Sbjct: 125 RKFPASMQLFAIITALTGTYFIITNGSIENVVLSKEAIIFGLLTAIGFAFYTLHPASLIK 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + + F + LI + + F ++
Sbjct: 185 ACGTTIVIGWGMLIGGIALLICNSSFGWSQLSQTFTPKTFSMLILIIISGTLSFLLYIGS 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + T + + +V++++ +P
Sbjct: 245 LKYLAATETSILSSIEPLVAAIVSITWLNESFGTYQLLGGVCIVLSVIFLTMPQ 298
>gi|262403017|ref|ZP_06079577.1| putative membrane protein [Vibrio sp. RC586]
gi|262350516|gb|EEY99649.1| putative membrane protein [Vibrio sp. RC586]
Length = 299
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 84/291 (28%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + ++ +
Sbjct: 3 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWFVAMLILSPFCL----PSAIRQWPT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKRYLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L +I +L + L M + + Y +
Sbjct: 119 LSVIGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + +H L + ++ I
Sbjct: 179 WTLIYLQGVCAVFMLTPLWLTSDHLLPTEGSLPLIAYAGIAASLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L ++
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGETVHPYHLIGGLLVISGVALSQLKIHRHN 289
>gi|297584230|ref|YP_003700010.1| hypothetical protein Bsel_1940 [Bacillus selenitireducens MLS10]
gi|297142687|gb|ADH99444.1| protein of unknown function DUF6 transmembrane [Bacillus
selenitireducens MLS10]
Length = 303
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 93/300 (31%), Gaps = 17/300 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + I WG+ + ++L E S + + R+ + + + +
Sbjct: 7 YLMLTVVMIFWGLNVVAVKYLVEHFSPVMMQGMRIGAAGLVLITILFLMHDISKVTV--- 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + +H L S + P+ + L ++ LK+ L+
Sbjct: 64 --KQWYYVTAAALFGQVLHHALVARGLQLTTASNASLILGLIPITTAILSTLILKDALSR 121
Query: 146 LQIIAALLIILSLLIMTLHSGIP-----------LLSLAIAVTWSAYCFARKTIPVGSSE 194
LQ L+ + + ++ + + + + S + T+ + +
Sbjct: 122 LQYGGVLIALSGVSLVVFEGSLLRGIQIAEGDLLIFAGMLVQAVSFIIIRKATLELNPKQ 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + A Y F ++ +F +++ I+
Sbjct: 182 MTGMMLLIGAAVLSIYGWLTEPRVIPEFPQASMAWGVFFASAVFATGLGHLMYNIAIRNI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + PL ++ + L + + + F ++V +++ KN+
Sbjct: 242 GAAQSAVFNNLVPLFALIGATLFLNESVTLRHGVGFLLIVTGVLLGTGYIEQKIMKNRQS 301
>gi|242039249|ref|XP_002467019.1| hypothetical protein SORBIDRAFT_01g018390 [Sorghum bicolor]
gi|241920873|gb|EER94017.1| hypothetical protein SORBIDRAFT_01g018390 [Sorghum bicolor]
Length = 415
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 89/288 (30%), Gaps = 12/288 (4%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG + + + + V + R+L + + + A G
Sbjct: 128 FFFWGTAMVAMKGVIPRTGPFFVAALRLLPAGALLVAFAAARGRKQPAGWEAWLAIAAFG 187
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
++ + + G + + S V + S+ G + L +
Sbjct: 188 LIDAACFQGFLAEGLQKTSAGLGSVIIDSQPLTVAILASLLFGESIGAVGVGGLVLGVVG 247
Query: 153 LIILSLLIMTLHSGIPLLS-----------LAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L++L + +++ + ++AV + K + G+ + +
Sbjct: 248 LLLLEVPALSIEGNDTTIWGSGEWLMFLSAQSMAVGTIMVRWVSKYSDPIMATGWHMIIG 307
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + + + G L ++ + ++ Y R L+T+
Sbjct: 308 GLPLLVISVLNHDPALSGHIQDLTLSDILALGYTSIFGSAVSYGVYFYNATRGSLTTLSS 367
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + P+ V L + V+ + ++A+ + ++I
Sbjct: 368 LTFLTPMFASVFGYLYLGETFSPVQLGGALLTLVAIYMVNYKSIIGEK 415
>gi|229167770|ref|ZP_04295503.1| Transporter, EamA [Bacillus cereus AH621]
gi|228615726|gb|EEK72818.1| Transporter, EamA [Bacillus cereus AH621]
Length = 312
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 69 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 124 KQERFSMKVQIGSIVAFIGAAFVLLTGHSGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTPSWGSLAYSIVFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 244 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 303
>gi|95928881|ref|ZP_01311627.1| protein of unknown function DUF6, transmembrane [Desulfuromonas
acetoxidans DSM 684]
gi|95135226|gb|EAT16879.1| protein of unknown function DUF6, transmembrane [Desulfuromonas
acetoxidans DSM 684]
Length = 310
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 91/287 (31%), Gaps = 14/287 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+FV A + WG++ L L + +R L + L
Sbjct: 6 IVFVALAALCWGLSGGIAGILISSGWDALALSFYRGTIGLLIFLGWL-----CLRPHGSG 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L N + + +A ++ F+ ++ + + PV + ER
Sbjct: 61 LNNRRMWFWSAIAGLGVAGNFSFYFVSVTHCNVAIAVTLMYSAPVFVCLVSFALKLERPT 120
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA-------VTWSAYCFARKTIPVGSSEGFF 197
L+ A ++L ++++T + ++ + S F
Sbjct: 121 VLKWTAIATVMLGIVLLTQIYDLDASNVTLFGVSAGLLAGVSYTIFIFGFKYATQYGSPQ 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + +VW + L L L F ++ G+K +
Sbjct: 181 AILSIAFAMLATLLVWFDHVEISYAILSAPQWPLIAGLGILGAGVSFTLYLLGLKHTGPT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ P+ + V +L + + + + G+++I + V + +
Sbjct: 241 SASIVAMIEPVTAALFGVVVLHESLAGSQMVGMGVIIITVTVLSIYS 287
>gi|332162424|ref|YP_004299001.1| putative inner membrane protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606510|emb|CBY28008.1| permease of the drug/metabolite transporter (DMT) superfamily
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666654|gb|ADZ43298.1| putative inner membrane protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860180|emb|CBX70500.1| hypothetical protein YEW_AV04300 [Yersinia enterocolitica W22703]
Length = 347
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 91/308 (29%), Gaps = 35/308 (11%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G + + +L G T + + L + + R + ++ +
Sbjct: 25 KRQGYVLALISAMLLGFTGIIIRILTAHYHLPTSVLAFWRAGLVAAVLLPILLVIKPEWA 84
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ +LAV G + ++ +++ + + +VFLG +F
Sbjct: 85 KLRRDQVKFYLAY-----GLLLAVFNGLWTESVALNGASISTILVYCSVGFTVFLGWIFY 139
Query: 140 KERLNHLQIIAALLIILSLL------------------IMTLHSGIPLLSLAIAVTWSAY 181
E + + ++ ++ + L SGI +A +
Sbjct: 140 NEYMGWREFFVIVISMVGCFLVSDGVNITAADFNFVGLFIGLASGIGYSFYTLAGRIATD 199
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL---------GNIPDTLF 232
+ G ++ L + G L
Sbjct: 200 RRYPVWNTILYVFGLSAVYQLIFNQLLLWFPIQGLQQMVGNLFFLSIGTEGVQWSGWWLL 259
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
LI F +F+ +K L+ ++ + V + F+L + + + + +
Sbjct: 260 LILAAGPTLLGFGLFNLSLKTLPLAIASLILTLELVFTAVIAYFLLDEILSASQLLGSAL 319
Query: 293 VVIAMVVY 300
V++ +++
Sbjct: 320 VLLGVLML 327
>gi|308187631|ref|YP_003931762.1| DMT superfamily transporter [Pantoea vagans C9-1]
gi|308058141|gb|ADO10313.1| Putative DMT superfamily transporter [Pantoea vagans C9-1]
Length = 299
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 93/282 (32%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++W I + ++ + + +R L +L + ++ + +
Sbjct: 3 FLYPLFAVMIWSINSIVSKLSASAIDPAAISFYRWLLALLVLTPFVLPGVWRMRKII--- 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA + + P+++V L V L+
Sbjct: 60 -RPHLWRLAILGLLGMVLYQSLAYYAAHSVSALFMGIIGALIPLLTVLLSVVILRIAPTL 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ +++ L+ + G+ L + ++Y +
Sbjct: 119 GILLGSVISFCGLVWLVSEGDVMQLLNHGMGKGELMMLAASTSYALYGVLTKRWALPLPI 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ GF L L + ++ +G++R S
Sbjct: 179 WQSLYVQIVFGVLLLLPGFLLAPDVSLNWHNLPLVAFAGLFASIIAPFLWIHGVQRLGAS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T I PL + +V L + + + I G+ + +++
Sbjct: 239 TTSIFMNLTPLFTALIAVLFLHEQLHSYHWIGGGLTLGGVIL 280
>gi|255320879|ref|ZP_05362053.1| permease of the drug/metabolite transporter [Acinetobacter
radioresistens SK82]
gi|255302048|gb|EET81291.1| permease of the drug/metabolite transporter [Acinetobacter
radioresistens SK82]
Length = 314
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 91/295 (30%), Gaps = 13/295 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G+LF C+ L+ ++ + +S L + + + +
Sbjct: 17 LGSLFAICSAFLFSTKAIFIKQTYALSPLVDATLLMALRMASALPFFLVICWLNRHRNQD 76
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
++ + + +++ + L+ L F+ P ++V S+ +++L
Sbjct: 77 IRPREWLLLVLAGILGYYLASWLDFLGLMFISASLERIILFLYPTLTVLASSLIYRQKLA 136
Query: 145 HLQIIAALLIILSLLI-------------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ A LL ++ + L +G+ S +
Sbjct: 137 PKMLFAILLSYSGTVLVMLQEHQSGPENSLWLGAGLVFASAVAFSAYLLLTPHLIHKFGS 196
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y + L + L+ + I
Sbjct: 197 WNFTGLALSVACSGTLIHYFLATPQPLVLITQLPASVIWYGIALGILVTVLPTILLMQSI 256
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+R + ++ P+L ++ +V L + ++ + + + ++ +++ L
Sbjct: 257 ERLGAAQSAMIASIGPILTLLLAVVFLDEYLNGWQWLGCILNIVGVMIITLSKRK 311
>gi|194014607|ref|ZP_03053224.1| transporter, drug/metabolite exporter family [Bacillus pumilus ATCC
7061]
gi|194013633|gb|EDW23198.1| transporter, drug/metabolite exporter family [Bacillus pumilus ATCC
7061]
Length = 298
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 93/298 (31%), Gaps = 11/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L V I WG+ +Q L + V +++ R+L S + F
Sbjct: 1 MDRNKGILLVLIGAICWGVGGTVSQKLFQQYGIYVNWLVTVRLLISGGLLLFVHFMTKER 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ K A+ +L+F + ++ ++ + + + PV+ + +
Sbjct: 61 AQLIGVWKKKRTAMQVLIFGVMGMLAVQYTYMASIQLGNAAVATLLQYTAPVMIIMYLVL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIP 189
+ ++ L + + ++ + + ++ ++ ++
Sbjct: 121 RRQSTFTKRDMLTVSLAFMGMFLLLTNGSVSTLTVPFVAVVWGILSAVALSFYTLYPINL 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + I + + L L F +
Sbjct: 181 LKEFDSLVVVGWAMLIGGAALSLVHPPWKINLSHLPVEAYVYLLFVIIFGTMIAFWFYIE 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ ++ PL +V++VF LK+P + +V ++ L
Sbjct: 241 SLQYLSPKESSLIGSVEPLAAVVTTVFWLKEPFGFFQWAGTACIVYMILFMALYQPKK 298
>gi|149245298|ref|XP_001527163.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449557|gb|EDK43813.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 483
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 71/291 (24%), Gaps = 24/291 (8%)
Query: 49 QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFF 108
+ L+++ R+ + + + K + M F
Sbjct: 138 PIHPLQILFIRMFVTYICCLIYMGVTRSVEDAPFGPPRVRKLLVMRGLVGFFGVFGMYFS 197
Query: 109 IYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP 168
+ L +F + F+ L + +L +L + + G
Sbjct: 198 LQYLSLSDAVAITFLVPMFTAFLAFVILKESYSILEGVCSFLSLGGVLLIAKPSFLFGDE 257
Query: 169 LLSLA-----------------------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
S + I + + + L
Sbjct: 258 PAKENDGDETVESASSGKRILATVVGLIGVCGASCVYIVLRKIGMHAHPLLSVSYFALTC 317
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + N G+ F+ + G++R K S +M YT
Sbjct: 318 CVVTFASILVIPSLSFVLPSNGYQWFLFSVIGISGFFMQFSLTAGVQRVKASRASLMAYT 377
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKTKK 315
+ I+ + I + + +++ A+++ N K
Sbjct: 378 GMVFAIIWDLTIWHHLPGILSFLGIALIIGNAVIILKFKPEHKEETNADAK 428
>gi|302550003|ref|ZP_07302345.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302467621|gb|EFL30714.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length = 334
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/283 (9%), Positives = 70/283 (24%), Gaps = 13/283 (4%)
Query: 30 VFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + +G + + + L + L V+ RV + + V L L
Sbjct: 22 ALVSAVAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVMLPLAVRHRALLRRRPGLLAG 81
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI----SVFLGSVFLKERL 143
+ + A A + L + + + +V + +
Sbjct: 82 FGLLAVAGVQACYFAALSRIPVGVALLIEYLAPALVLGWVRFVQRRPVTRAAAVGVVLAV 141
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L + + L + L + + + + G ++
Sbjct: 142 GGLACVVEVWSGLGFDALGLLLALGAACCQVGYFVLSDQGSDAGDEAPDPLGVIAYGLLV 201
Query: 204 AIPALFYVVWNGFSGG-------EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L V L + + ++R
Sbjct: 202 GAAVLTVVARPWSMDWSVLTGTARMDGTPVAAVALLAWIVLVATVVAYVTGVLAVRRLSP 261
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G++ ++ V + +L + + + IV++ +
Sbjct: 262 QVAGVVACLEAVIATVLAWILLGEHLSAPQIAGGVIVLVGAFI 304
>gi|304310599|ref|YP_003810197.1| Protein of unknown function DUF6, transmembrane [gamma
proteobacterium HdN1]
gi|301796332|emb|CBL44540.1| Protein of unknown function DUF6, transmembrane [gamma
proteobacterium HdN1]
Length = 321
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 2/283 (0%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + Y++WG T L +F +E + L + R + + + + + + +
Sbjct: 19 LLALVGVYVIWGSTYLAMRFAIESMPPLLMAGVRYISAGALMLAFLRWRGHAWPSGRQWI 78
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
N +G + V + + + GS
Sbjct: 79 -NGGIIGAFLMLGGNGMVGLALEQGVSSGMSALVVGVAPLFALAFANIWGSRARIREWVG 137
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ I LI+L+L S + L +A A+ + + +L
Sbjct: 138 MVIGFGGLILLNLGNELSASPLGASLLVLAALTWAFGSMWSQHLNMPAGFMASAVEMLLG 197
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ F + + ++ + + Y
Sbjct: 198 GFVLLAASALRGETVTEMPTAKAWWALGYLISFGAILGFSAYVHLLQNVRPAIATSYAYV 257
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
PL+ + V++ + +D I++ +V+ P+ +
Sbjct: 258 NPLVAVGLGVWLAGEQVDRTALFAMAIILSGVVLVYWPSRERA 300
>gi|255994371|ref|ZP_05427506.1| integral membrane domain protein [Eubacterium saphenum ATCC 49989]
gi|255993084|gb|EEU03173.1| integral membrane domain protein [Eubacterium saphenum ATCC 49989]
Length = 289
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 95/281 (33%), Gaps = 7/281 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + + L+ + +F + +++ I R + +L F I
Sbjct: 9 SSKRKGILLIPASSFLFCAMQISIRFATGHIPLMQQIFFRNIITLIISFIFI------KK 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+L + + YA S ++P + L + L
Sbjct: 63 DGASYFGGKSHQPLLFVRSGFGFLGLIAAFYASGHALQADVSTIIRLSPFMITILTRIIL 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+++ +QI A L+ L + S + A A+ + + +
Sbjct: 123 KEKISKIQIPALLIAFSGALFIVSPSFKSGILPLTAAFACAFSSSIAYTLLAYFKDKVNG 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M ++ + F +V + +F + N D L+ G+L F +Y ++ +
Sbjct: 183 MTIIMHFSCFCMVGSIPFMINNFVIPNAFDATMLLLIGVLGGFGQIALTYAYRQQNAGEI 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ Y + + IV L + + + +V++A +
Sbjct: 243 SVYSYFSIIFSIVLGFIFLGESLPATSILGSSLVLLAAYLV 283
>gi|219871422|ref|YP_002475797.1| DMT superfamily drug/metabolite transporter [Haemophilus parasuis
SH0165]
gi|219691626|gb|ACL32849.1| DMT superfamily drug/metabolite transporter [Haemophilus parasuis
SH0165]
Length = 288
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/289 (16%), Positives = 107/289 (37%), Gaps = 6/289 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G LF A IL+G + L + + R++ +P + AI F +
Sbjct: 2 LKGILFSLSANILFGAGYYFAVLLRPLESDSIFGFRIVVLMPFILLAIFLFHQQKAFKDL 61
Query: 84 TLK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P + +L+ A A+ F++A Q S Y + P+++V LG + K
Sbjct: 62 YYRVKQTPYLIFILLLLALNTAIQLWLFLWAPNNNQAIEVSIGYLLLPIVAVALGKLVFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ +A + + I + + +A +
Sbjct: 122 EHFTLLKWLALFFATIGVTINIFLTASISWATFVAGFGYPIYIVLRRYF--HINNLATFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + F + + ++ + N +L GL+N F ++ ++ +G
Sbjct: 180 VELLLLLPFAIYYIAQVDQDYILMQNEYLYFYLALLGLVNGMAFILYIASSNLLPINVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ Y PL+M+ S I + +D I+ + +++++ + +
Sbjct: 240 LLGYAEPLVMLFISFAI-GEVLDAKSYILMACLAVSIILLSVDSFRKVK 287
>gi|254241283|ref|ZP_04934605.1| hypothetical protein PA2G_01978 [Pseudomonas aeruginosa 2192]
gi|126194661|gb|EAZ58724.1| hypothetical protein PA2G_01978 [Pseudomonas aeruginosa 2192]
Length = 305
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 89/297 (29%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ++W + + + + + +R L +L + ++ L
Sbjct: 9 YLLPILAALIWAGSTVVNRLAVGVIEPAAISFYRWLLALLVLTPWLLPRIWRQRRL---- 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V +A++ +A T P+++ L + + +
Sbjct: 65 IRRHFWQLFVLGVLGMALYQSLAYFAAHTVSATSMGLILGTMPLLTTLLALPLMGVQPSR 124
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ LL L+++ G+ L + + +Y +
Sbjct: 125 SVWLGCLLSFCGLILLISAGHPSRLWREGVGLGQFLMLMASLSYAIYCLLLKRWQLPIAT 184
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
E + I V+ F L L + ++ ++++ +
Sbjct: 185 WESLYMQILCGLLVLLPAFLLSPSQQLTAQNLPLVIYAGLFASALAPGLWNHALAVIGAE 244
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V + PL + +V +L + + I G++++ + V ++ +
Sbjct: 245 RVAVFMNLTPLFTGLLAVVLLGEALHGYHAIGGGLILVGIAVVQGLLPLSRRAIRGA 301
>gi|167573621|ref|ZP_02366495.1| hypothetical protein BoklC_27560 [Burkholderia oklahomensis C6786]
Length = 307
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/279 (8%), Positives = 66/279 (23%), Gaps = 6/279 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L + L R L + + + ++ +
Sbjct: 21 IWGSAFVAQRLSLAVIGPLLFTGLRFLLGAAVLVPLLRLNGAARAHCAAIARDRTLLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +LAV L + F + V+ +G F + A L
Sbjct: 81 LVLGGLLAVSISMQQIGLQYTKIANAGFISSLYVVLVPIIGVFFRHRT-GAGTWLGAFLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A + + + +
Sbjct: 140 AIGLYFLSVDEHFSMLYGDWFQLAGAIVIAVHVIAVGHLARRHDPLVLSFMQFVVCGVLC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ L G L + + + A + ++ +
Sbjct: 200 LALGLAIEPVSRTSIVHALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ L + + +++ ++V L
Sbjct: 260 AIAGWAALGETLSLRALTGCALMLAGLLVCQLLPGHARR 298
>gi|149201776|ref|ZP_01878750.1| hypothetical protein RTM1035_04530 [Roseovarius sp. TM1035]
gi|149144824|gb|EDM32853.1| hypothetical protein RTM1035_04530 [Roseovarius sp. TM1035]
Length = 305
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 81/285 (28%), Gaps = 11/285 (3%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + ++ L V + R++ + + + L L+
Sbjct: 16 GVIWGASFMFVSVALTGAGPFFVAAVRIVLGAGFLLCLLRFKGRKLPALRGPDGARIWQF 75
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV-FLKERLNHLQIIAA 151
LV + + + +A + P++ + L ER++ +++
Sbjct: 76 ALVMALFSNVLPFILLSWAQQSVASGFAGVCMAAVPLLILPLAHFLVPGERMHVRRLVGF 135
Query: 152 LLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+L ++++ + + T + + V
Sbjct: 136 VLGTTGVVVLIGPEAFTSTGKDLESLARLACLGAAGGYAIGSIATRLSPEVDRLSLSALV 195
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + A V G L L L + + A S ++
Sbjct: 196 LTLAAGMIVPLALVVEGLPTDLNTKSLLALLYLGILPTGVAQLLLVQVNREAGPSFFSLV 255
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P+ ++ +L + + ++++ + + +
Sbjct: 256 NYMVPVWSVILGALVLSEVLPPSLLAAMTLILVGVGMSQWGALRR 300
>gi|15888335|ref|NP_354016.1| permease [Agrobacterium tumefaciens str. C58]
gi|15156007|gb|AAK86801.1| permease [Agrobacterium tumefaciens str. C58]
Length = 289
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 90/291 (30%), Gaps = 6/291 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G V + +LW L+ + + + + +++ R ++ + +
Sbjct: 2 SLAHERSSGIYLVAASAVLWSTAGLFVR-MADMDMWSMVAWRSAFTFLALGAFFLL---- 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + A+ +I +L Y P I + V
Sbjct: 57 RNRFARQRSSMSFGFPGIAGCLVSAIAAITYIASLRWTTVANVMTIYATLPFIVAGIAFV 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L++R+ + +IA L + +LI + L I + I +
Sbjct: 117 CLRDRVTYRFVIAGCLAFVGVLISVGAAVSHQDMLGIFAAFIMTTGCATQIVIAKRFPDM 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ A+ AL + L L +F + G +R
Sbjct: 177 DTTLMTALAALICICVALPLMQFEIPAPTQIIACALY-GVLTTAFGYIFLLQGSRRINAG 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G++ +L V + I + GIV++++ YL +
Sbjct: 236 EAGLISMLDVILGPVWVWLFYNEVISPIVLTGGGIVIMSVAWYLAGDRRAA 286
>gi|83951371|ref|ZP_00960103.1| possible transporter, RarD family protein of the DMT superfamily
[Roseovarius nubinhibens ISM]
gi|83836377|gb|EAP75674.1| possible transporter, RarD family protein of the DMT superfamily
[Roseovarius nubinhibens ISM]
Length = 309
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 99/300 (33%), Gaps = 16/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T +G LF+ +L + + + V+V +V + R ++ + +
Sbjct: 11 SETTLGILFMVGFSVLAPVMDTAAKLIGDQVAVGQVAATRFVFQSALLLPLAAWMG---- 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+G+ + A +L V F ++L +FV P I LG+ L
Sbjct: 67 --WLHRPRRGEMGLHLMRAALLLVATSCFFFSLRFMPVAEAISIFFVEPFILTLLGAWML 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + IA + L++ + + +A+ +A+ FA I
Sbjct: 125 GEPIGPRRYIACAVGFAGALLIIRPTFQDVGPVALLPLVTAFLFAFYMILTRRMATRMHP 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHF---------FLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + A + V+ + L GL+ + S+
Sbjct: 185 ITLQAYTGIAAVLIALPLLTAFNGSGLSELDPSWPGPREVWLLAVVGLIATLSHVCLSFA 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ A ST+ ++Y + V ++ D + + ++V + + L +
Sbjct: 245 LSLAPASTIAPLQYLEIVSATVMGFYVFGTLPDGLAMVGIALIVGSGLFVFLREQHLERR 304
>gi|291618226|ref|YP_003520968.1| YyaM [Pantoea ananatis LMG 20103]
gi|291153256|gb|ADD77840.1| YyaM [Pantoea ananatis LMG 20103]
Length = 299
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 92/297 (30%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + + + + + +R L +L + ++ + +
Sbjct: 3 FLFPLFAVLIWSVNAIVNKLSASAIEPAAISFYRWLLALLVLTPFVL----PGVIRQWQT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + ++V +A++ YA + + P+++V L V L+
Sbjct: 59 IRPHLMRLMVLGLLGMALYQSLAYYAAHSVSALFMGIIAALIPLLTVLLSVVILRIAPTV 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF--------ARKTIPVGSSEGFF 197
+ +L+ L+ + + L A S
Sbjct: 119 GILAGSLISFCGLIWLVSAGNLDQLLHHGIGAGEAMMLAASASYALYGVMTKRWSIPLPV 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ GF L L + ++ +G+++ S
Sbjct: 179 WQSLYVQIAFGVLLLLPGFLMTPDVALTPHNLPLVAFAGLFASILAPWLWIHGVQKLGAS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I P+ + +V L + + + I G+ + +++ S + K
Sbjct: 239 ITSIFMNLTPVFTALIAVLFLHEHLHSYHWIGGGLTLTGVLLAQRLRRPLSARKSIK 295
>gi|300768405|ref|ZP_07078306.1| DMT superfamily drug/metabolite transporter [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|300494020|gb|EFK29187.1| DMT superfamily drug/metabolite transporter [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
Length = 312
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/309 (12%), Positives = 96/309 (31%), Gaps = 13/309 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ G L A ILWGI+ + L ++ + + R++ + + +
Sbjct: 2 TQQNHLRGVLLASSACILWGISGVAASTLFINNPHLTAMWLTQVRMISAGLILLVWGMVA 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
K A + + L + A+ + + F+ P I
Sbjct: 62 GKHP--FKIWHHRHAAWTAVSYGLLGLIPVQLCYFEAVRVGNAPIATIIQFLGPFIISIY 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKT 187
+F + +++I ++ + L++ H +L
Sbjct: 120 YFLFKHVTPSRIELIGMIMAFIGTLLIVTHGHLNSLAISPVILFWGGLSAIGVATNTLIP 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ G + A ++ H + L ++ L F +F
Sbjct: 180 RTILPKYGALTVTGWGLLIAGLFLTLLQPMWRVHLTITWPQLGLLIVIILLGTVAPFLMF 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + +T +M+ PL + S+ L + + I ++++A++ L T
Sbjct: 240 ARSLSDILPTTASLMDAFEPLAATIFSITFLNVQLTSFDFIGGLLIILAVMALSLNTHKM 299
Query: 308 SGKNKTKKS 316
+ +++
Sbjct: 300 LHFLRRRRA 308
>gi|227889250|ref|ZP_04007055.1| DMT superfamily drug/metabolite transporter [Lactobacillus
johnsonii ATCC 33200]
gi|227850052|gb|EEJ60138.1| DMT superfamily drug/metabolite transporter [Lactobacillus
johnsonii ATCC 33200]
Length = 297
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 88/298 (29%), Gaps = 12/298 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T A + WGI+ L+ + L ++ + + R++ S +
Sbjct: 2 TKKRLWTCLAALACVFWGISGLFAKGLFNISSSITPIWISQVRMVVSGVLLLIFAQITGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LK A+ ++ + L + + + + F+ P +F
Sbjct: 62 --RPLKTMTDKKDAITVIAYGLLGLLPVQYCYFIVVQQANASIATVLQFIGPFFVLFYMV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPV 190
VF + L + +IAA++ + + + H P + ++
Sbjct: 120 VFEHQVLRAVDVIAAIVAFIGVFFLATHGHFNQLSLTPSVLFWGLISAVGVATNTLIPRR 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + L + F
Sbjct: 180 LLDHTSSLVVTGWGLLFSGIALVIAHPVWPKIPNNINVFWLMAGIIVIGTLIPFQWMMGS 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST +++ P+ + SV I + V + +++ A++ +
Sbjct: 240 LRYIKPSTASLLDAFEPVSATIGSVIIFGLVMAPVDWVGSIMIICAVLALNWEPKHHK 297
>gi|226226019|ref|YP_002760125.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226089210|dbj|BAH37655.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 320
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/289 (8%), Positives = 82/289 (28%), Gaps = 17/289 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ ++WG+ + L +S L RV+ + +F
Sbjct: 22 AWLVFMAVIWGVNYSVVKAGLAYLSPLVFNGTRVVLATVVLFTLAALVRDV-----PWPS 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +L+ ++ FI+ L + + + TP + + +ER+ +
Sbjct: 77 GRQRIQLLLIGLLGNGLYQLLFIFGLSRTRAGVAALIVAATPAWIAIISQIIGRERVTGV 136
Query: 147 QIIAALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ L +L + + G L++ +
Sbjct: 137 SLVGIGLQLLGVACVVGSTHAFDGEGGVMLGAALMAGGSVCWALFTVLLQPHTQNAHPLH 196
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V E + + ++ +G++
Sbjct: 197 LSAVTMSSGALVIVSVALPEMLRLEWSAVPLAAWGSVAYAGIGALVVAYLLYYHGVRVLG 256
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + P++ + + +L + + + ++ +++ +
Sbjct: 257 PTRTSMYSNLQPVIALGVAWLMLHEQPSGWQLLGAAFILGGLLLTRVSR 305
>gi|194744311|ref|XP_001954638.1| GF18371 [Drosophila ananassae]
gi|190627675|gb|EDV43199.1| GF18371 [Drosophila ananassae]
Length = 348
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 86/298 (28%), Gaps = 24/298 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L + + + + + + L V+ +E+ S R + L ++Y +
Sbjct: 38 LGILLATLSSLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKR 97
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ M YA S F TPV FLKE
Sbjct: 98 VILLLRCFM-------GTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT 150
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF------- 197
++ + ++ ++++T + + + S F
Sbjct: 151 LFNVLTINMTLVGVVLITRPPFVFGEPAGSEDILTGKTYDIWGPVAAISSTLFGANVYIL 210
Query: 198 ----------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ M AL Y + S G + D ++ G+ + +
Sbjct: 211 LRALKNLHFSVIMTNFGTIALVYTLIVCGSIGAVCWPSCGRDRWLVVVLGIFSFLGQILL 270
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ + V I + V + + + +V+ ++V+ L
Sbjct: 271 TLSLQIEQAGPVAIARCADIVFAFVWQMIFFGETPTAYSLVGAFMVIASVVLTALKKW 328
>gi|83648033|ref|YP_436468.1| DMT family permease [Hahella chejuensis KCTC 2396]
gi|83636076|gb|ABC32043.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Hahella chejuensis KCTC 2396]
Length = 315
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/286 (15%), Positives = 94/286 (32%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W L + F + + L + HR W + + + L
Sbjct: 17 YLGLAGTSLFWAGNALVARGFNDSIPPLALSFHR--WLVCALLISPFILRAFLRHKDIIK 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ +G+L F +A + + + + PV ++ L L +RLN
Sbjct: 75 QHWGKIGVLAFLG--VATYNSLLYTSAQFTSALNITLVNSLLPVATLVLAMPLLGQRLNL 132
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ L L L + LH G +++ A+ + RK
Sbjct: 133 KSGVGVLFAFLGALYVILHGEPSALLSLQMNAGDSIMAAAMVIWSLYSVLLRKWAIPIPG 192
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F + L +P + F + + + +++YG+ +
Sbjct: 193 FDLFAILLGLGLPMILPFYVLEHHIKGGFEWSYDLAAVIAYVAIFPSLCAYLLWNYGVTK 252
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
ST + Y PLL + S+ L + ++ I G ++ + +
Sbjct: 253 TSPSTAALFAYLTPLLTALLSIPFLGEHPESYHLIGGGAILAGLWL 298
>gi|13476494|ref|NP_108064.1| hypothetical protein mll7828 [Mesorhizobium loti MAFF303099]
gi|14027255|dbj|BAB54209.1| mll7828 [Mesorhizobium loti MAFF303099]
Length = 295
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/292 (17%), Positives = 108/292 (36%), Gaps = 7/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L AY+L+ + L ++V +++ R + + GG
Sbjct: 9 TRERVLAGILLTGAAYLLFSTQDASIKLLVTGMTVWQIMFFRSIT-----ILSACAAIGG 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L DT+++P MLV SA LA W + A + Q + Y+ P+I
Sbjct: 64 RQLFADTVRSPIVRPMLVRSAFTLAA-WLCYYNAARSLQLAELTTVYYAAPIIVTVFSVF 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ L+ +A L+ + + + + L + V +A +A + + +
Sbjct: 123 LLGEKVPMLRWLAVLIGFAGVFVACDPTHLGLSVPVLLVLAAALLWAIAIVLLRKTALAE 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M L + ++++++ + ++ L L G L + G+KR S
Sbjct: 183 RSMIQLLLNNFYFLLFSAVPALLWWHTPDLAQLLLLASVGALGGLAQYLLFEGMKRMPAS 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +EY++ L I + +++ A ++ +
Sbjct: 243 ILAPLEYSSLLWAFALGFAIWGDVPRREVFLGAALIIAAGLLIVGGEHFRKR 294
>gi|85707101|ref|ZP_01038189.1| Possible transporter, RhaT family, DMT superfamily protein
[Roseovarius sp. 217]
gi|85668387|gb|EAQ23260.1| Possible transporter, RhaT family, DMT superfamily protein
[Roseovarius sp. 217]
Length = 291
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 87/292 (29%), Gaps = 7/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + G++ + + + + ++ + L + I + +F +I GG
Sbjct: 1 MENLRGSILMVLSMGGFALEDMFIKRLADTLPVGQIILLIGIGGALIFGSITRAQGGRLW 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+D + P + L + A+ S TP+ ++FL
Sbjct: 61 SRDLVSRPVILRNFGELLGTLGF-----VMAIALTPLSSASAILQATPLAVTLGAALFLG 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + A L+ +L++ ++ + + A + + M
Sbjct: 116 EAVGWRRWAAILVGFCGVLMVIRPGMAGFEPASLFAVLAVFGLAARDLATRRVPRTISSM 175
Query: 201 CVLAIPALFYVV--WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V + + L+ L + ++ ++
Sbjct: 176 QLSTYAFATLVPTGVILLAFHGTPAWPTAVNWRDLVLALLCGVSAYYAIVAAMRLGDVAV 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ Y+ + ++ V + + D GI++ + + + +
Sbjct: 236 ITPFRYSRLVFALIIGVTLFDERPDVWTLAGAGIIIASGIYTFWRERRLARR 287
>gi|325198873|gb|ADY94329.1| integral membrane protein [Neisseria meningitidis G2136]
Length = 284
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 1 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ + + L S + P++ VF+G F ++
Sbjct: 54 PREEWKPLLIAAFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 114 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 174 FTSVSIAAASLMCLPFSLALAQSYTVDWNVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 234 NVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 276
>gi|149204433|ref|ZP_01881400.1| hypothetical protein RTM1035_18810 [Roseovarius sp. TM1035]
gi|149142318|gb|EDM30365.1| hypothetical protein RTM1035_18810 [Roseovarius sp. TM1035]
Length = 292
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 90/279 (32%), Gaps = 14/279 (5%)
Query: 47 LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWG 106
V E + R +++P + + + LK T + + + G
Sbjct: 14 AAHVPPGEAVFFRSFFAIPVILVWLTLRGDLRTGLKAT-----SPLNHFWRGFVGTAAMG 68
Query: 107 FFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG 166
AL + + P++ V ++FL E++ ++I A L + +LI+
Sbjct: 69 LSFAALGMLPLPEVTALGYAAPLLVVVFAAMFLNEQVGVVRIGAVALGLGGVLIVLAPRL 128
Query: 167 IPLLSLA---------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
L + A C A I V ++ ++ V + +
Sbjct: 129 TALSGPTVETVQAVGAMLALTGAICAALAQIYVRKLVQTEETSAIVFYFSVTSTVLSFLT 188
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + P+ L+ GLL + + A S V +Y + L + FI
Sbjct: 189 IPFGWVMPTGPEIGLLVLAGLLGGLGQIFLTSSYRFADASVVAPFDYASILFALGIGYFI 248
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ +V++A ++ + + +S
Sbjct: 249 FDEVPTRAMLTGASLVILAGILIIWRERQLGIRRNKARS 287
>gi|269122132|ref|YP_003310309.1| hypothetical protein Sterm_3544 [Sebaldella termitidis ATCC 33386]
gi|268616010|gb|ACZ10378.1| protein of unknown function DUF6 transmembrane [Sebaldella
termitidis ATCC 33386]
Length = 293
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 89/277 (32%), Gaps = 15/277 (5%)
Query: 30 VFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ +WG T+ ++ ++ R ++ + +
Sbjct: 10 LLLVGFIWGTGFTATKIGLDGGITPYYMMFLRAAFASIFISVIFF--------RELRNVT 61
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ V V L + + F L+ +F + V+ +L +F K+R +
Sbjct: 62 RREVLAGVLLGVFLYLGFSFQTVGLVYTTASKNAFLTAINVVLVPYLYWMFYKKRPDIFA 121
Query: 148 IIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+++A+L + + +++L + I + A I + + +
Sbjct: 122 VLSAVLCLCGIGLLSLTGTDFSLNKGDILTMICAVFFACHITFTGILSKKVDAIRLNLVQ 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ +F + F+G + L F + + + + I+
Sbjct: 182 MYTMTVFSFITCVFNGSITLNVTQTQFLAVLYLGIFSTGICFLLQTTCQQYTTPARASIL 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T L V S IL + + +++I+++V
Sbjct: 242 LCTESLFAPVLSFLILHEVLTPKAIAGAALILISVIV 278
>gi|228471198|ref|ZP_04056011.1| putative membrane protein [Porphyromonas uenonis 60-3]
gi|228307013|gb|EEK16095.1| putative membrane protein [Porphyromonas uenonis 60-3]
Length = 306
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 101/289 (34%), Gaps = 17/289 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAI 71
K + S +G L + +G+ PL + + VS V+ +R L + V +
Sbjct: 2 TDKTSTSATDWLGYLMGLISSATFGLIPLLSIPVLSQGVSEGTVLMYRFLIAALIVGSIV 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
V L + + ++ +L+ + + I + + +F P
Sbjct: 62 VIRRESLRV------SLRSFLILLALSVLYFFSSFLLIEGYQHMPSGVATVLHFSYPTFV 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYC 182
V L + ++R+N LQ +A LL + + +++ + ++++ ++ Y
Sbjct: 116 VLLMFLVFRQRINVLQGLAVLLALSGVSLISGFFESDVTAISLRPLLTVLFSGFCYATYI 175
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + F + V+ + + + ++ +G + +
Sbjct: 176 VILRHARLEPMSSFKLTTYVMGLSTILFALFCKATGASLLLDNETQWIYTALLALIPTVC 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ ++R + IM PL +V F L + + + I G
Sbjct: 236 ANITLVWAVQRIGSTPTAIMGALEPLTAVVVGAFALGEELSLGQGIGIG 284
>gi|260576624|ref|ZP_05844611.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
gi|259021109|gb|EEW24418.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
Length = 278
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/282 (8%), Positives = 84/282 (29%), Gaps = 8/282 (2%)
Query: 30 VFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + + + + + + + R + + + + L P
Sbjct: 1 MLASGLSFVAVNGIVRYLGTDLPAAQSAFIRFGFGVLLLAPML-------GSLLRGGFAP 53
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + + YA+ + ++ PV+ ++ E L ++
Sbjct: 54 GVLRLYAGRGLAHTLAVVCWFYAMARIPVAEATAIGYLNPVLVALGAALLFGEGLAARRV 113
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A + ++ +I+ + A +A CFA + V+A+ +L
Sbjct: 114 LAIAVALVGAVIVLRPGVREVTGGHYAQMAAAVCFAASYLFAKEVSRTESAARVVAMMSL 173
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + + +L + + + A L+ + + +
Sbjct: 174 SVAIGLAPVAWWVWVPVTLAQLAWLALVAGFATVGHFCMTKAFRAAPLAVTQPVVFLQLV 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + +D + +++ A+ V + +
Sbjct: 234 WATLLGTLVFDEAVDGFVLLGGAVIIGAISVLTWRETVARRR 275
>gi|229012305|ref|ZP_04169482.1| Transporter, EamA [Bacillus mycoides DSM 2048]
gi|228748941|gb|EEL98789.1| Transporter, EamA [Bacillus mycoides DSM 2048]
Length = 312
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/309 (11%), Positives = 94/309 (30%), Gaps = 17/309 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L ++ F+ ++ S ++P+ + L +
Sbjct: 69 RIERKDWLR-----LLAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 124 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTPSWGSLAYSIVFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 244 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 303
Query: 308 SGKNKTKKS 316
+ N K S
Sbjct: 304 TALNLKKVS 312
>gi|108563601|ref|YP_627917.1| hypothetical protein HPAG1_1176 [Helicobacter pylori HPAG1]
gi|107837374|gb|ABF85243.1| conserved hypothetical integral membrane protein [Helicobacter
pylori HPAG1]
Length = 302
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 104/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + F +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLFIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|120406482|ref|YP_956311.1| hypothetical protein Mvan_5539 [Mycobacterium vanbaalenii PYR-1]
gi|119959300|gb|ABM16305.1| protein of unknown function DUF6, transmembrane [Mycobacterium
vanbaalenii PYR-1]
Length = 292
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 87/284 (30%), Gaps = 2/284 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ G L ++WGI L + +E +SV ++ R + + +L
Sbjct: 2 SLRGWLLFTAMGVIWGIPYLLIKVAVEGLSVPVLVFARTAVGALVLIPLTLRRGAWAPVL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +A +L I + LT + +
Sbjct: 62 AHWRPVVAFAFFEIIAAWLLLSDAERHITSSLTGLLIAAAPIVAALLDRLTGGDQPLTVK 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL L A + +L+ + S P+ + + A + +
Sbjct: 122 RLAGLGTGLAGVAVLAGPELAGGSAWPVTEVLLVAVCYAIAPLIAARYLAEVPAMPLTAA 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + AL YV + T + + S F +F I+ +
Sbjct: 182 CLGLAALIYVGPAAATWP-AEIPSMRVLTAVALLAVVCTSLAFILFFALIREVGAPRALV 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y P + + + V +L +P+ + +++ V+ V
Sbjct: 241 ITYVNPAVALAAGVIVLNEPLTARHLLGLAMILAGSVLATRRPV 284
>gi|28379056|ref|NP_785948.1| transport protein [Lactobacillus plantarum WCFS1]
gi|254557188|ref|YP_003063605.1| transport protein [Lactobacillus plantarum JDM1]
gi|308181249|ref|YP_003925377.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
gi|28271894|emb|CAD64799.1| transport protein [Lactobacillus plantarum WCFS1]
gi|254046115|gb|ACT62908.1| transport protein [Lactobacillus plantarum JDM1]
gi|308046740|gb|ADN99283.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 312
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/309 (12%), Positives = 96/309 (31%), Gaps = 13/309 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ G L A ILWGI+ + L ++ + + R++ + + +
Sbjct: 2 TQQNHLRGVLLASSACILWGISGVAASTLFINNPHLTAMWLTQVRMISAGLILLVWGMVA 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
K A + + L + A+ + + F+ P I
Sbjct: 62 GKHP--FKIWHHRHAAWTAVSYGLLGLIPVQLCYFEAVRVGNAPIATIIQFLGPFIISIY 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKT 187
+F + +++I ++ + L++ H +L
Sbjct: 120 YFLFKHVTPSRIELIGMIMAFIGTLLIVTHGHLNSLAISPVILFWGGLSAIGVATNTLIP 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ G + A ++ H + L ++ L F +F
Sbjct: 180 RTILPKYGALTVTGWGLLIAGLFLTLLQPMWRVHLTITWPQLGLLIVIILLGTVAPFLMF 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + +T +M+ PL V S+ L + + I ++++A++ L T
Sbjct: 240 ARSLSDILPTTASLMDAFEPLAATVFSITFLNVQLTSFDFIGGLLIILAVMALSLNTHKM 299
Query: 308 SGKNKTKKS 316
+ +++
Sbjct: 300 LHFLRRRRA 308
>gi|261400979|ref|ZP_05987104.1| putative membrane protein [Neisseria lactamica ATCC 23970]
gi|269209092|gb|EEZ75547.1| putative membrane protein [Neisseria lactamica ATCC 23970]
Length = 300
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 92/298 (30%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDVLGSGWMLVAAVCFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + A + + ++ + + + ++L G G+ + K
Sbjct: 175 LAGEPGWRVVFYLSATGVAMSSVWATLTGWHMLSWQSAVYLSGIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + + +
Sbjct: 235 VGDKFTVASLSYMTVVFSTLSAAFFLGEQLFWQEILGMCIIILSGILSSIRPIAFKQR 292
>gi|282866479|ref|ZP_06275523.1| protein of unknown function DUF6 transmembrane [Streptomyces sp.
ACTE]
gi|282558691|gb|EFB64249.1| protein of unknown function DUF6 transmembrane [Streptomyces sp.
ACTE]
Length = 346
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/305 (7%), Positives = 67/305 (21%), Gaps = 17/305 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
A+ G + +G + + + L + L V+ RV + + G
Sbjct: 3 ATHGRSAGLGLALASAFAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALIMLPVAWRHRG 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI-----S 131
+ L + A A + L + + + +
Sbjct: 63 LVRERPALLAGFGLFAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRPVT 122
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ + ++ + + L + S T
Sbjct: 123 RAAAAGVVLAVGGLACVVEVWAGLSFDALGLLLALGAACCQVGYFVLSDQGSQGGTGERA 182
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF----------LGNIPDTLFLIGYGLLNS 241
+ + + G + L L
Sbjct: 183 EPPHPVGVIAYGLLVGAVILTVVARPWGMDWGTLGANAVMNGHDVPAWLLLGWIVLLATV 242
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ G++ ++ V + +L + + + + +V+ +
Sbjct: 243 LAYVTGVVSVRLLSPQVAGVVACLEAVIATVLAWVLLGEHLSAPQLVGGAVVLAGAFIAQ 302
Query: 302 LPTVI 306
Sbjct: 303 SSAPR 307
>gi|86136872|ref|ZP_01055450.1| membrane protein [Roseobacter sp. MED193]
gi|85826196|gb|EAQ46393.1| membrane protein [Roseobacter sp. MED193]
Length = 303
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 95/301 (31%), Gaps = 13/301 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+ L A L+ + + V E + R +++P + + + LK
Sbjct: 1 MLAILLKVAAIGLFTGLSALIKAVSDVVPAGEAVFFRSFFAIPVIVVWLSMRGDLKNGLK 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + L + + TP+ ++ L +VFL ER
Sbjct: 61 TQ-----RPMGHILRGLVGTSAMAMTFMGLGMLPLPEVTAIGYATPIFTLILAAVFLGER 115
Query: 143 LNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ ++I A + +L +LIM + + + I +
Sbjct: 116 IRLVRISAVTVGLLGVLIMIYPRLSGGIDMSSTAFVGVLLILGATVARGFVQIHIRRMVM 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ ++ + + + + + ++P L LIG GL+ + + + A
Sbjct: 176 TEHTAAIVFYFSVTASLLSLLTLPFGWVIPDMPTLLLLIGAGLVGGVAQILVTSSYRFAP 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S + +Y + L I + V +V+ ++ + K
Sbjct: 236 ASMLAPYDYVSMLFAIAIGYIWFAELPTIVMLAGACLVIAGNILVIWRESRLGLVRGKAK 295
Query: 316 S 316
S
Sbjct: 296 S 296
>gi|309791436|ref|ZP_07685942.1| protein of unknown function DUF6 transmembrane [Oscillochloris
trichoides DG6]
gi|308226515|gb|EFO80237.1| protein of unknown function DUF6 transmembrane [Oscillochloris
trichoides DG6]
Length = 312
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 26/305 (8%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + I+W T ++ L + + R L +F +++ +
Sbjct: 2 SQQLKGYITALIGIIVWSTTGIFMSHLITVYHIPAFVLALWRNLLVCIVLFPILLFMNRT 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L +K + + + +LA+ + ++ + + + + +
Sbjct: 62 LLRIKRNDLS-----LYHWYGFVLALLNTLWALSVQANGAAVATVLVYSSAGFTAIFAIW 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------------------GIPLLSLAIAVTWS 179
KERL ++ IA LL + ++++ G+ + +
Sbjct: 117 VFKERLGIIKGIAILLSLTGCVMVSNAYDGAVWSLNPLGVITGILSGVVFAIYTLMGKET 176
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
A + S L G L + + +
Sbjct: 177 ARRGINTWNALFYSFTLGSIWITLFNLWPGMPGSTGSYMRLWPELPLNGWLILFMLSFVP 236
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F +++ + S ++ P + V + L + + V+ I I+++A+ V
Sbjct: 237 TLLGFGLYNTSMNYLSASIANLLATLEPAMTAVQAYIFLDERMSVVQIIGSCIIILAVFV 296
Query: 300 YLLPT 304
+
Sbjct: 297 VQVEK 301
>gi|301168876|emb|CBW28469.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 296
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 57/293 (19%), Positives = 119/293 (40%), Gaps = 5/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 5 IQGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSL 64
Query: 84 TL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + + F++A L +G + YF+ P+I LG +L
Sbjct: 65 ITTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAILGWAWL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KERL+ +Q IA LL + H+ ++ V + + I
Sbjct: 125 KERLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGIT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ I ++ S L L G++++ ++ +S
Sbjct: 184 LDIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIF 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 244 AVLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKKKVR 296
>gi|257470649|ref|ZP_05634739.1| hypothetical protein FulcA4_14981 [Fusobacterium ulcerans ATCC
49185]
gi|317064855|ref|ZP_07929340.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313690531|gb|EFS27366.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 295
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 93/289 (32%), Gaps = 14/289 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ +N L A ++WG T + L V ++ R +S +F +
Sbjct: 3 NNKNEKLKMASSVTLAIVA-LVWGTTFAVLKDTLSIVQPFSLMMFRFGFSALLLFVIYIG 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + + F I ++ SF +I F
Sbjct: 62 KIKKAKMKDIKNGSII--------GIFMFLAFYFMIISIKNTTASKVSFIIGAYVLIVPF 113
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIP 189
L + K+R + +I A L + L +T+ G+ + + A
Sbjct: 114 LAWIINKKRPDKYAVIGAFLATVGLGFLTIEKGVAFNIWDMVAGCCSFFFAAHMIAIEKY 173
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S+ I + + A +++ G+ G F + + F I +
Sbjct: 174 GRDSDPILITVIQFIVTAGIFIILVGYFEGYDFSILPKIKWTLGYLVVISTVISFAIQTI 233
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ ++ ++ + + +V+ L + + I +V +A+V
Sbjct: 234 AQRYISSTSTALILTLQSVFGAIFAVWYLNERMTFQMGIGCMLVFVAIV 282
>gi|91085389|ref|XP_966562.1| PREDICTED: similar to transmembrane protein 20 [Tribolium
castaneum]
gi|270009150|gb|EFA05598.1| hypothetical protein TcasGA2_TC015802 [Tribolium castaneum]
Length = 341
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 89/298 (29%), Gaps = 23/298 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + +++ V + + ++R L L ++Y L
Sbjct: 33 LGLILATLSSLFFSLCSVIVKWMTDVDPMALAAYRYLGVLLPAIPIVIYRQEPL------ 86
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
ML+ + YA S F PV + +FLKE
Sbjct: 87 -FPQGKRIMLLLRSFTGTAALMLSFYAFRHMPLADASVIVFSVPVFTGIFARMFLKEPCG 145
Query: 145 HLQIIAALLIILSLLIMTLHSG----------------IPLLSLAIAVTWSAYCFARKTI 188
+ + +L ++ ++++T ++A A +
Sbjct: 146 LFSVFSVVLTLIGVVLITRPPSLFGDTVNSLGESGQKTEIWGAVAAFSATLFGANAYVLL 205
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
F + M AL + F G D ++ + + +
Sbjct: 206 RALKGIHFSVIMTNFGSFALCQCLLVTFLIGALCVPPCGLDRYLIVALAFFSFLGQILLT 265
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ + V I + + + V + + +V+ ++V+ + I
Sbjct: 266 LALQLEQAGPVAIARSSDIVFAFIWQVLFFNEIPNRFSIGGAVLVMSSVVLTGMRKWI 323
>gi|86356273|ref|YP_468165.1| putative transporter permease protein [Rhizobium etli CFN 42]
gi|86280375|gb|ABC89438.1| putative transporter permease protein [Rhizobium etli CFN 42]
Length = 301
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 93/292 (31%), Gaps = 12/292 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ AS T + + G +P++ + L +V + RV +L +F +
Sbjct: 7 TLSEASPSTRLALAALVFGGAAIGGSPIFVR-LSEVGPMATAFWRVALALIPIFIVSL-- 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
++ G+LV +LA+ + +L + + PV +
Sbjct: 64 --MKKDRGPKPQSLSDYGLLVLPGLMLALDLAAWHLSLTMTSVANATLLANLAPVFVTLI 121
Query: 135 GSVFL-------KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
+F L + +++ + + + IA + A
Sbjct: 122 AVLFFKARTSGVFLLGLVLALAGVVILKGGPAGLGNGNLSGDGAAMIAAFFYACYILAIG 181
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ I + A A+ F G+ ++ + ++
Sbjct: 182 RLRSRFDTIRIMLWSTASAAVCTFPIAFFFEGQMLPATLYGWSILFGLAFVSHAGGQVAI 241
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+Y + + + P++ + + +L + I T++ + +V+ ++V
Sbjct: 242 TYALAYLPPAFSSLTLLLQPVVAAILAWALLDEAIGTMQALGAAVVLAGIMV 293
>gi|52078762|ref|YP_077553.1| hypothetical protein BL01669 [Bacillus licheniformis ATCC 14580]
gi|52784132|ref|YP_089961.1| YcbK [Bacillus licheniformis ATCC 14580]
gi|52001973|gb|AAU21915.1| hypothetical membrane protein YcbK [Bacillus licheniformis ATCC
14580]
gi|52346634|gb|AAU39268.1| YcbK [Bacillus licheniformis ATCC 14580]
Length = 314
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 82/294 (27%), Gaps = 18/294 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G +F+ + + ++ ++ + V+ +R L++ P + + + L +
Sbjct: 24 GVVFMVFGTMCFASKSIFVKWAYEQGAQPEAVLLYRQLFAAPLFWLIFIVYRSKLPAKPE 83
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + L + P+ + + + K+ +
Sbjct: 84 ---KAEIFKACAAGLLCFFLSPLLDFIGLHGVSATVERMIVMSYPMFVLIITAFVNKKMV 140
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A LL+ L + + L ++ + A G +
Sbjct: 141 SGKTFAAILLVNAGLFLAVGGWDVQALEANLSGAFLILLSAVAYAAYLVVAGGLVRQIGG 200
Query: 204 AIPALFYVVWNGFSG-------------GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + G F+I + F G
Sbjct: 201 IRMNAYGMSAASLAMAGYALLRSLREQPGIVLSYPPAMYGFFMIIAAVTTVIPFLFMLEG 260
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+KR ++ P+L I V L + + V+ + +V + + +
Sbjct: 261 MKRIGAERGAVISMIGPVLTIFGGVLFLNERLTPVQWLGCLLVHLTVSLLEYRK 314
>gi|15676355|ref|NP_273491.1| hypothetical protein NMB0444 [Neisseria meningitidis MC58]
gi|7225668|gb|AAF40881.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|261391957|emb|CAX49421.1| putative transporter [Neisseria meningitidis 8013]
gi|316985787|gb|EFV64730.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|325130811|gb|EGC53545.1| integral membrane protein [Neisseria meningitidis OX99.30304]
gi|325134811|gb|EGC57447.1| integral membrane protein [Neisseria meningitidis M13399]
gi|325140958|gb|EGC63465.1| integral membrane protein [Neisseria meningitidis CU385]
gi|325144982|gb|EGC67265.1| integral membrane protein [Neisseria meningitidis M01-240013]
gi|325199631|gb|ADY95086.1| integral membrane protein [Neisseria meningitidis H44/76]
gi|325203550|gb|ADY99003.1| integral membrane protein [Neisseria meningitidis M01-240355]
Length = 284
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/276 (10%), Positives = 79/276 (28%), Gaps = 3/276 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A G + +
Sbjct: 1 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHVGKIPREEWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + + V + A + L +
Sbjct: 61 LLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARAYHWICGA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L++ G L + + A + + F + +
Sbjct: 121 AAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPAFTSVSIA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + L + + +++ G+ R + G++
Sbjct: 181 AASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P++ ++ +V IL + + V + +V+ A +V
Sbjct: 241 SLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 276
>gi|254453786|ref|ZP_05067223.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198268192|gb|EDY92462.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 304
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 90/299 (30%), Gaps = 14/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL------EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + + A + T L + L + L++ R +++ G A
Sbjct: 5 QAPLTAVVLMITATLFIAGTMLAAKSLGTDTLGAPLHPLQISHGRFMFAFIGFITASAVL 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + A A+ + F+ PV + L
Sbjct: 65 RPKIRA--------PNMRLHMARTIFGATGVTLMFAAVAFIPMSDATAISFLNPVFGMIL 116
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E++ + +AA + + LI+ A+ +A + + +
Sbjct: 117 AIPFLGEKVGRWRWLAAAMAFVGALILLRPGPDTFQVAALLALGAALAMGFELVLIKKLA 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L I V + + + L+ GL+ + F I RA
Sbjct: 177 DREPALQILLINNAIGCVLMSVAVIAFWAPPTLAQWGVLVTLGLMMAGAQTCFINAIARA 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S V Y + + I Q D + + I+V + +N + +
Sbjct: 237 DASFVTPFSYLTLIFAGLYDWAIFAQIPDWISVLGAAIIVSGAALLAWREAVNRSRARR 295
>gi|145589545|ref|YP_001156142.1| hypothetical protein Pnuc_1364 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047951|gb|ABP34578.1| protein of unknown function DUF6, transmembrane [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 325
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/309 (13%), Positives = 88/309 (28%), Gaps = 13/309 (4%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFF 69
+ S + + G L +L+ + + + +I+ R+L +LP F
Sbjct: 2 QSASAAHHHRRYLYGILMAGVGSMLFSGKAILVKLAFGYGANAETLIALRMLMALP--LF 59
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+Y+ L + + L L ++TP
Sbjct: 60 WSIYWWESRRKQMSPLTWLDRGKLFFLGFLGYFLSSYVDFLGLQYISVGLERIVLYLTPT 119
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSA 180
I + + L++ + +Q A ++ L + ++ + A A +++
Sbjct: 120 IVLVISYFVLQKPITRMQWYALVVGYLGVTVVFIQDASSTGIHAWLGMLLVFTSACSYAM 179
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
Y + + A L + F L L+ L
Sbjct: 180 YMIGSGEMVRRIGSVRLVVYASSASAVLSIAQSTIYDPSAIFNQVAPIYWLSLLNASLCT 239
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ I R V P+ I IL +P+ ++ +V+ AM +
Sbjct: 240 VIPMLLIMIAINRIGSPLVAQAGILGPVSTIFMGYLILSEPVTWMQIGGMTLVIAAMWLL 299
Query: 301 LLPTVINSG 309
+
Sbjct: 300 VRSDPPKKK 308
>gi|84500854|ref|ZP_00999089.1| membrane protein, putative [Oceanicola batsensis HTCC2597]
gi|84390921|gb|EAQ03339.1| membrane protein, putative [Oceanicola batsensis HTCC2597]
Length = 298
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 89/289 (30%), Gaps = 9/289 (3%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFF 69
S PT+ ++ A + + + + L ++ E+++ R L + +
Sbjct: 5 SPSTDTATVLSPTVRAAFWMAGAILSFLTMAVAGRVLAAELDTFEIMTLRSLTGVIIICI 64
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ + + F+ L + YA+ F P+
Sbjct: 65 VATATASWHRITMHRFGLQVLRNVAHFTGQNL------WFYAITLIPLAQVFALEFTAPL 118
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ L +FL ER++ + +A L +L++ + IA A FA I
Sbjct: 119 WVLVLSPLFLGERMSKRRALAGLTGFAGILLIARPGFQEITPGLIAAALCAIGFAGTIIS 178
Query: 190 VGSSEGFFIEMCVLAIPAL--FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S +C+L + F L + + G F
Sbjct: 179 TKSLTRDVPTICILFWLTVLQAIFGLVCGGYDMDFALPSPALWPAALLVGFAGLFAHYCV 238
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ + A S V M++ V + I + +D + I+ A
Sbjct: 239 TSALSIAPASVVSPMDFLRLPAAAVVGLLIYGEALDPFVLVGAAIIFAA 287
>gi|323141656|ref|ZP_08076537.1| putative membrane protein [Phascolarctobacterium sp. YIT 12067]
gi|322413871|gb|EFY04709.1| putative membrane protein [Phascolarctobacterium sp. YIT 12067]
Length = 296
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/296 (7%), Positives = 78/296 (26%), Gaps = 5/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G + WG T + T+ L LE++ R + + ++ A
Sbjct: 1 MQNTRYIGHIAALITIATWGTTFISTKVLLTGFQPLEILFFRFIMAFFALWLAYPQMLKT 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-- 135
+ G+ ++ + F+ + G
Sbjct: 61 DKKQEPVFMAAGLCGICLYYLLENIALTYTQASNVGVIGSTAPFFTALLAHYFMRSAGSL 120
Query: 136 --SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + I ++ + L + + + + ++ +
Sbjct: 121 SKQFIIGFFIVMSGIACISFNGAAMQLNPLGDLLAISAAVVWAFYALLTKKISSYGYPVI 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + F F + ++ F ++ ++
Sbjct: 181 LATRRTFFYGILFMVPALGFLDFELNLARFANTTYLFNIVFLGLGASALCFVTWNLAVRE 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ Y P++ +++S +L++ I + + + + + +
Sbjct: 241 LGAVKASVYIYMVPVITVITSAIVLQEKITLLVALGTILTMTGLFISEYRPKKKIK 296
>gi|282866475|ref|ZP_06275519.1| protein of unknown function DUF6 transmembrane [Streptomyces sp.
ACTE]
gi|282558687|gb|EFB64245.1| protein of unknown function DUF6 transmembrane [Streptomyces sp.
ACTE]
Length = 338
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 78/286 (27%), Gaps = 6/286 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + + +V R+L+ + A+ + T +
Sbjct: 48 SLIWGFSFLLIKVGTDGYAPFQVTLGRLLFGAAVLAAAMAVRRERVPRSARTWGHLLVAA 107
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ + + + + + V L R + L
Sbjct: 108 FLLNALPFSLFAYAELTIPSTLAGICNATSPLWGMALSMVALSEDRPTRRRVAGLGLGFL 167
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L SG+ A+A+ S + G + L +
Sbjct: 168 GVLTVLGAWQGFSGLDFGGTAMALLASLSYPVGWIYVRRTLAGTGPSALALTGSQLFLGT 227
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ V +P + L + ++ +T ++ Y P
Sbjct: 228 VQLAVITPVFTSMPTRFPLLPTLAVVALGALGTGLAVLLQYGLVQEVGPTTAQMVTYFIP 287
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ + V +L + + +V+ + + +
Sbjct: 288 VIATAAGVAVLGEQLSWNTPAGALVVLAGAALTQSRGHRKAARAPR 333
>gi|229022121|ref|ZP_04178673.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1272]
gi|228739173|gb|EEL89617.1| Transporter, drug/metabolite exporter [Bacillus cereus AH1272]
Length = 310
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 100/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 7 RRIGLMMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILAFLLIKKQNIF 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + + + FI + + F+ PV+ +
Sbjct: 67 HIWKHPKYFIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYVAFEQ 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
K+ +QI+A + + + + I + L+ A+ ++ Y ++
Sbjct: 125 KKFPASMQILAIITALTGTYFIITNGSIENIVLSKAAITFGLLTAIGFAFYTLHPASLIK 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + F + + LI + + F ++
Sbjct: 185 ECGTTIVIGWGMLIGGIALLICNRSFGWNQISQTFTLQTFSMLILIIISGTLSFLLYIGS 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 245 LKYLAATETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGVCIVLSVIFLTMPQ 298
>gi|319639138|ref|ZP_07993894.1| integral membrane protein [Neisseria mucosa C102]
gi|317399615|gb|EFV80280.1| integral membrane protein [Neisseria mucosa C102]
Length = 291
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/290 (9%), Positives = 83/290 (28%), Gaps = 3/290 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++WG + + ++ + + ++ R+L + V + + G + +
Sbjct: 1 MFYQILALLIWGSSFIAAKYSYEMIDPALMVEARLLIAALMVLPSCRRYLGRIPRSEWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + + + A L +
Sbjct: 61 LLWISFVNYVVVLMLQFIGLKYTSAASAITMVGLEPLLVVFVGHFFFNDKAKLYHWICCA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+++L L + ++ + + F +
Sbjct: 121 AAFAGVGMMVLGGAEEGGSIDWFGCLLILLAGFGFAGVIRPSQKMIARIGAPAFTAASMA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A L + L + + +++ G+ + + G++
Sbjct: 181 AAALLCLPFSLVLADSYQINWSWGGTLSVLYMGIGCSWLAYLLWNKGMNKVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P++ ++ +V IL + + ++ + +V+ + V + I S K
Sbjct: 241 SLEPVIGVIMAVLILGEHLSSMAALGITVVISSTFVAGVLARIGSKHKKA 290
>gi|282850580|ref|ZP_06259959.1| putative membrane protein [Veillonella parvula ATCC 17745]
gi|282580073|gb|EFB85477.1| putative membrane protein [Veillonella parvula ATCC 17745]
Length = 295
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 80/281 (28%), Gaps = 11/281 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G ++ + +L+ ++ + L + E+ R + V +
Sbjct: 2 AKKGLIYALLSALLFSTMNVFVKLLGTNIPPGEIAFARGFFGTVAVLIIMYVKGIRF--- 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + G+LV AL+ + + + T + ++FLKE
Sbjct: 59 -----SKEDRGLLVMRGLYGGFGMVCNFIALVHIKLSDATILFQTTGIFVFIFSALFLKE 113
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +I++++L+M S V A + +
Sbjct: 114 SIPKGAGKWLGVILIAVLVMVNPFSYESFSWYALVAILGAALAAAAYTTIRTISKRGQHS 173
Query: 202 VLAIPALFYV--VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
I A F + + G E + D L + G ++ +
Sbjct: 174 NFEIMAYFMITGMIAGLVTTEQLVMPQGTDWLIIFAIGGISVVAQFFLTGAFVTTNAVVA 233
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++Y + I + + + I+ V+
Sbjct: 234 QFLQYVGVFISSFYGFLIFGESLSIATVGAGIAMFISSVML 274
>gi|261409933|ref|YP_003246174.1| hypothetical protein GYMC10_6163 [Paenibacillus sp. Y412MC10]
gi|261286396|gb|ACX68367.1| protein of unknown function DUF6 transmembrane [Paenibacillus sp.
Y412MC10]
Length = 316
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/311 (12%), Positives = 104/311 (33%), Gaps = 22/311 (7%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T + G + ++ + L + L+ ++HR S ++
Sbjct: 6 TSRAYAAALGYTAIIGFSFMFVKLALVHANPLDTLAHRFTLSFLAASLGLLIARR----- 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + + ++ + + + + L+ + P+ ++ L S+FLKE
Sbjct: 61 KVPMDLKRLLTIVPLAIFYPFLFFTLQTFGLVYTSSAEAGIIHATVPIFTLLLASLFLKE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSS 193
R + Q + +L + ++ + + G+ + ++ +A
Sbjct: 121 RSSWAQKLFTVLSVTGIISIFVLKGVSFEQSSTLGIVLILLSALSNAIYSVMARKMTQKQ 180
Query: 194 EGFFIEMCVLAIPALFYVVWN--------GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I + I + + + + F+ + L L +
Sbjct: 181 SVLDITFIMSMIGFVLFNLMSVSQHAAQGTLVHYFDPFMHSSFVWSVLYLGVLSSLGTSL 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ +Y + + + S +GI A ++ I V L + + I +V+I ++ L
Sbjct: 241 LSNYALSQIEASRMGIFNNLATVVTIFGGVAFLNEQLAYYHVIGAVLVIIGVIGTSLAGR 300
Query: 306 INSGKNKTKKS 316
+ K + ++
Sbjct: 301 ARNAKKRLARN 311
>gi|170741771|ref|YP_001770426.1| hypothetical protein M446_3611 [Methylobacterium sp. 4-46]
gi|168196045|gb|ACA17992.1| protein of unknown function DUF6 transmembrane [Methylobacterium
sp. 4-46]
Length = 312
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 87/289 (30%), Gaps = 16/289 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ ++W + +++ + +VS L + S R L + +
Sbjct: 18 AFRAYALLTLTALIWAGNAVASKWAVGEVSPLALTSLRWLVACAVLAPFAA----RRVAR 73
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L P + +L+ V F A + PV+ + + +
Sbjct: 74 EWRLLRPAWLRILLMGGCGFTVFNALFYAAGAATTVTNMALFQGAMPVVVLACSFLAYRT 133
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF----- 196
+ +Q++ L+ L +++ H + +L + G +
Sbjct: 134 PVTRIQVLGVLVTSLGVVVAATHGDLAVLRTFAFNRGDLLLLLACLLYGGYTVALRARPA 193
Query: 197 ------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
F + + A+ ++ + G + + + F G
Sbjct: 194 VSGATFFAALALAALLTSLPLLLAEWVAGRLIWPSAAGWAIIAFVGLGPSLISQLFFMRG 253
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + GI P+ +V + +P + +V+ +V+
Sbjct: 254 VELIGPNRAGIFVNLVPVFGAALAVTVAGEPFRLDNAVALALVLGGIVI 302
>gi|170743049|ref|YP_001771704.1| hypothetical protein M446_4941 [Methylobacterium sp. 4-46]
gi|168197323|gb|ACA19270.1| protein of unknown function DUF6 transmembrane [Methylobacterium
sp. 4-46]
Length = 327
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 92/295 (31%), Gaps = 3/295 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIV 72
++ +S +G + + + + + L E++ R +++ + +
Sbjct: 17 ARPASSGRPYLGIGLKVLSALAFTLMSAGVKGLSDRHFPTGEIVFFRSAFAILPLVIWLR 76
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALL-TRQGFLTSFSYFVTPVIS 131
+ + ++ + L+ + + A G L + S V
Sbjct: 77 WQGSVVEAVRTRNLRGHVLRSLIGACGMFAGFAGLSFLPLSDSIAIGYASPLLVVVLAAL 136
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
V V L +LI+L+ + G A+ +A C A TI V
Sbjct: 137 VLRERVQGYRWAAVLVGFLGVLIMLAPHLEFGAGGAAGSIGALFACLAAVCAAAATIQVR 196
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ LF + + + L ++P+ + G+L + +
Sbjct: 197 RLTMTERTGAIVLYFFLFTSLLGLSTLVLGWSLPSLPEFGLFVLVGVLGGIGQILLTESY 256
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ S V EYT L ++ F+ Q + IV A V +
Sbjct: 257 RHGDASLVAPFEYTTMLWSLLIGWFVFGQLPQPAVALGGSIVAAAGVYTVWRERR 311
>gi|116630338|ref|YP_815604.1| DMT family permease [Lactobacillus gasseri ATCC 33323]
gi|282852299|ref|ZP_06261644.1| putative membrane protein [Lactobacillus gasseri 224-1]
gi|116095920|gb|ABJ61072.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus gasseri ATCC 33323]
gi|282556578|gb|EFB62195.1| putative membrane protein [Lactobacillus gasseri 224-1]
Length = 297
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 90/299 (30%), Gaps = 14/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T A + WGI+ L+ + L ++ + + R++ S +
Sbjct: 2 TKKRLWTCLAALACVFWGISGLFAKGLFNISASITPIWISQVRMIVSGILLLIFAQVTGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LK A+ ++ + L + + + + F+ P +F
Sbjct: 62 --KPLKTMTDKKDAITVIAYGLLGLLPVQYCYFIVVQQANASVATVLQFIGPFFVLFYMV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIP 189
VF + L + +IAA++ L + + H L +
Sbjct: 120 VFEHQVLRAVDVIAAIVAFLGVFFLATHGHFNQLSLTPSVLFWGLISAVGVATNTLIPRR 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + + NI + + + F
Sbjct: 180 LLDHTSSLVVTGWGLLFSGVALALAHPVWPKIPNNINIFWLMAGVIV-IGTLIPFQWMMG 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST +++ P+ + SV I + + I +++ A++
Sbjct: 239 SLRYIKPSTASLLDAFEPVSATIGSVIIFGLVMAPIDWIGSIMIICAVLALNWEPKHKR 297
>gi|320170948|gb|EFW47847.1| hypothetical protein CAOG_05785 [Capsaspora owczarzaki ATCC 30864]
Length = 579
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/311 (11%), Positives = 91/311 (29%), Gaps = 25/311 (8%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFF-AIVYFSGGLSLLKDTL 85
L + + + ++ V+ S R+ + + A+ F+ + L+
Sbjct: 219 ILCLALVAV--SSAGTAFKHIDDVTPFLRASWRLFVTSLVLLPPAVFQFARADASLRAQC 276
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P A+ ++F LA H+G ++++L S + +G + L +
Sbjct: 277 LKPSALLAILFGGICLACHFGSWVWSLDNTTLAH-SLLLVCMHPVIFVMGMLLLGRPVAR 335
Query: 146 LQIIAALLIILSLLIM---TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+++ + + +++ G + + A F + F
Sbjct: 336 GELLGTGIALAGTVLLLQDVRSDGEVTIPGDLVAFLGAVFFVGYLSCGKTLRRFMPVFIY 395
Query: 203 LAIPAL--------------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+++ G + G + + +
Sbjct: 396 AFSVTFVSSVVLGFIAIPAEDVSLFSASPSGSFGWAGLDYLPVIIYLSFGPGLVGHTGIN 455
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ--PIDTVRTIVFGIVVIAMVV-YLLPTV 305
Y +K V I T PL+ V + + ++++ +V+
Sbjct: 456 YIVKFLPPLVVSISFLTEPLIGTVIGIA-FGESNVPGAWTWCGGLVLMVGVVMNVTTGHA 514
Query: 306 INSGKNKTKKS 316
+ + + KS
Sbjct: 515 HSVRQAQRPKS 525
>gi|315182153|gb|ADT89066.1| hypothetical membrane protein [Vibrio furnissii NCTC 11218]
Length = 297
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 82/291 (28%), Gaps = 1/291 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +WG + L+ + +I RV ++ + +Y L +
Sbjct: 6 FLQLLGLAAIWGGSFLFLRLAAHSFGPAYLIEARVGFAALSLLLIGIYLKKSLPFRQHWR 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L + + T+ + + K +
Sbjct: 66 HFIILGLFNSALPFLLFAYAAQVLNVSTLSILNSTAPIWGAVIGYVWHKTPLSPKAIIGL 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L + + +I+ L + + L +A + +Y A S F
Sbjct: 126 LVGVLGVSVIVGLDRSLMGAETALPMVAATLAAFSYGIATNYTKNAPSISSFNNAHGSMW 185
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A +V+ + + L + ++ +K S + +
Sbjct: 186 AAALWVLPLLPLMPMRAVPSGVEMLSVVALGILCTGLAYLLYFRLVKDIGPSPTLSVTFL 245
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P I+ +L + I + +V++ ++ + + + + +
Sbjct: 246 IPGFGILWGYLVLGETIGLNTLLGTTLVLVGTMMVTGFSPLALLRTRQPAA 296
>gi|313886584|ref|ZP_07820297.1| putative membrane protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923940|gb|EFR34736.1| putative membrane protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 306
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 99/289 (34%), Gaps = 17/289 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE--VISHRVLWSLPGVFFAI 71
K + +G L + +G+ PL + + V E V+ +R L + V +
Sbjct: 2 TDKTSTPSTDWLGYLMGLISSATFGLIPLLSIPVLSQGVAEGTVLMYRFLIAALIVGSIV 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
V L + + ++ +L+ + + I + + +F P
Sbjct: 62 VIRRESLRV------SWRSFLILLALSVLYFFSSFLLIEGYQHMPSGVATVLHFSYPTFV 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYC 182
V L + ++R+N LQ +A LL + + +++ + ++ + ++ Y
Sbjct: 116 VLLMFLVFRQRINLLQGLAVLLALCGVSLISGFFESDVTAIPLRPLFTVLFSGFCYATYI 175
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + F + V+ + A+ + ++ +G + +
Sbjct: 176 VILRHSRLEPMSSFKLTTYVMGLSAILFALFCKATGANLLLDNTTQWIYTALLALIPTVC 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ ++R + IM PL ++ L + + + I G
Sbjct: 236 ANITLVWAVQRIGSTPTAIMGALEPLTAVLVGALALGEELSLGQGIGIG 284
>gi|238853514|ref|ZP_04643890.1| permease of the drug/metabolite transporter [Lactobacillus gasseri
202-4]
gi|238833872|gb|EEQ26133.1| permease of the drug/metabolite transporter [Lactobacillus gasseri
202-4]
Length = 297
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 87/298 (29%), Gaps = 12/298 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T A + WGI+ L+ + L ++ + + R++ S +
Sbjct: 2 TKKRLWTCLAALACVFWGISGLFAKGLFNISASITPIWISQVRMVLSGILLLIFAQVTGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LK A+ ++ + L + + + + F+ P +F
Sbjct: 62 --KPLKTMTDKKDAITVIAYGLLGLLPVQYCYFIVVQQANASVATVLQFIGPFFVLFYMV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPV 190
VF + L + +IAA++ L + + H P + ++
Sbjct: 120 VFEHQVLRAVDVIAAIVAFLGVFFLATHGHFNQLSLTPSVLFWGLISAVGVATNTLIPRR 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + L + F
Sbjct: 180 LLDHTSSLVVTGWGLLFSGIALALAHPVWPKIPNNINIFWLMAGVIVIGTLIPFQWMMGS 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST +++ P+ + SV I + + I +++ A++
Sbjct: 240 LRYIKPSTASLLDAFEPVSATIGSVIIFGLVMAPIDWIGSIMIICAVLALNWEPKHKR 297
>gi|59801611|ref|YP_208323.1| hypothetical protein NGO1252 [Neisseria gonorrhoeae FA 1090]
gi|194097835|ref|YP_002000879.1| hypothetical protein NGK_0255 [Neisseria gonorrhoeae NCCP11945]
gi|239998319|ref|ZP_04718243.1| hypothetical protein Ngon3_02404 [Neisseria gonorrhoeae 35/02]
gi|240014511|ref|ZP_04721424.1| hypothetical protein NgonD_07679 [Neisseria gonorrhoeae DGI18]
gi|240016956|ref|ZP_04723496.1| hypothetical protein NgonFA_07282 [Neisseria gonorrhoeae FA6140]
gi|240079702|ref|ZP_04724245.1| hypothetical protein NgonF_00070 [Neisseria gonorrhoeae FA19]
gi|240113726|ref|ZP_04728216.1| hypothetical protein NgonM_09209 [Neisseria gonorrhoeae MS11]
gi|240116469|ref|ZP_04730531.1| hypothetical protein NgonPID1_09594 [Neisseria gonorrhoeae PID18]
gi|240117120|ref|ZP_04731182.1| hypothetical protein NgonPID_01430 [Neisseria gonorrhoeae PID1]
gi|240121033|ref|ZP_04733995.1| hypothetical protein NgonPI_04547 [Neisseria gonorrhoeae PID24-1]
gi|240122336|ref|ZP_04735292.1| hypothetical protein NgonP_00065 [Neisseria gonorrhoeae PID332]
gi|240125069|ref|ZP_04737955.1| hypothetical protein NgonSK_02416 [Neisseria gonorrhoeae SK-92-679]
gi|240127050|ref|ZP_04739711.1| hypothetical protein NgonS_00065 [Neisseria gonorrhoeae SK-93-1035]
gi|254494480|ref|ZP_05107651.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|260441690|ref|ZP_05795506.1| hypothetical protein NgonDG_11502 [Neisseria gonorrhoeae DGI2]
gi|268594180|ref|ZP_06128347.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268595849|ref|ZP_06130016.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268599796|ref|ZP_06133963.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268602139|ref|ZP_06136306.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268602807|ref|ZP_06136974.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268680922|ref|ZP_06147784.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268683665|ref|ZP_06150527.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268685406|ref|ZP_06152268.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291045071|ref|ZP_06570779.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293399696|ref|ZP_06643848.1| hypothetical protein NGNG_01892 [Neisseria gonorrhoeae F62]
gi|59718506|gb|AAW89911.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|193933125|gb|ACF28949.1| Conserved hypothetical integral membrane protein [Neisseria
gonorrhoeae NCCP11945]
gi|226513520|gb|EEH62865.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268547569|gb|EEZ42987.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268549637|gb|EEZ44656.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268583927|gb|EEZ48603.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268586270|gb|EEZ50946.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268586938|gb|EEZ51614.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268621206|gb|EEZ53606.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268623949|gb|EEZ56349.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268625690|gb|EEZ58090.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011074|gb|EFE03071.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291609947|gb|EFF39070.1| hypothetical protein NGNG_01892 [Neisseria gonorrhoeae F62]
gi|317163608|gb|ADV07149.1| hypothetical protein NGTW08_0175 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 300
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 91/298 (30%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + + + + + E++ R+L+S + A V
Sbjct: 3 TAKKDILGSGWMLVAAACFTVMNVLIKEASAKFALGSGELVFWRMLFSTVTLGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLTTGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQEPAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + A + + ++ + + P ++L G G+ + K
Sbjct: 175 LAGEPGWRVVFYLSATGVAMSSVWATLTGWHTLSFPSAVYLSGIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPIAFKQR 292
>gi|327394620|dbj|BAK12042.1| transporter EamA family YyaM [Pantoea ananatis AJ13355]
Length = 299
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 92/297 (30%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + + + + + +R L +L + ++ + +
Sbjct: 3 FLFPLFAVLIWSVNAIVNKLSASAIEPAAISFYRWLLALLVLTPFVL----PGVIRQWQT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + ++V +A++ YA + + P+++V L V L+
Sbjct: 59 IRPHLLRLMVLGLLGMALYQSLAYYAAHSVSALFMGIIAALIPLLTVLLSVVILRIAPTV 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF--------ARKTIPVGSSEGFF 197
+ +L+ L+ + + L A S
Sbjct: 119 GILAGSLISFCGLIWLVSAGNLDQLLHHGIGAGEAMMLAASASYALYGVMTKRWSIPLPV 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ GF L L + ++ +G+++ S
Sbjct: 179 WQSLYVQIAFGVLLLLPGFLMTPDVALTPRNLPLVAFAGLFASILAPWLWIHGVQKLGAS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I P+ + +V L + + + I G+ + +++ S + K
Sbjct: 239 ITSIFMNLTPVFTALIAVLFLHEHLHSYHWIGGGLTLTGVLLAQRLRRPLSARKSIK 295
>gi|301794475|emb|CBW36913.1| putative membrane protein [Streptococcus pneumoniae INV104]
gi|332203277|gb|EGJ17345.1| hypothetical protein SPAR120_1394 [Streptococcus pneumoniae
GA47901]
Length = 298
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 99/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLLIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ I + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAIFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|288906060|ref|YP_003431282.1| integral membrane protein, permease [Streptococcus gallolyticus
UCN34]
gi|306832099|ref|ZP_07465253.1| integral membrane protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732786|emb|CBI14362.1| conserved integral membrane protein, putative permease
[Streptococcus gallolyticus UCN34]
gi|304425538|gb|EFM28656.1| integral membrane protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 302
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 99/300 (33%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ GT+ V A I WGI+ + Q+L +++ + S R++ S + V S
Sbjct: 2 NKNLKGTIMVLMAGIAWGISGISGQYLMAHGMNINLLTSVRLIVSGLLLTAMAVI-SQPQ 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + G+ VF+ L ++ ++ A+ + +V P+I + S+
Sbjct: 61 HFFRAIKQPKVLGGIAVFAIIGLLMNQYAYLMAIHYTNAGTATVLQYVAPIIILAYVSLK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIPVG 191
K+ + A L IL I+ H + + + +
Sbjct: 121 NKQLPTLSEFFAILFAILGTFIIATHGHFDGLAMTPKGFFWGLFSAVTYSFYIVLPAKLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G F + + + S L + + F + F G
Sbjct: 181 REFGSFTVIGLGMLMGGVVFPIVTRSWQYPLVLTSGNWLALFGIIIIGTVFAYTFFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + SV I+ + + + +++A++ L +I K
Sbjct: 241 TIIGAVKGSLLAAIEPVSSVFFSVTIMHEIFYPMDFVGMIFIIVAVLTVSLRDLIAVRKQ 300
>gi|261365970|ref|ZP_05978853.1| protein RarD [Neisseria mucosa ATCC 25996]
gi|288565431|gb|EFC86991.1| protein RarD [Neisseria mucosa ATCC 25996]
Length = 300
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 114/290 (39%), Gaps = 4/290 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---SLL 81
G + + IL+ + LY +++ ++ EV + R++ L +F + G +
Sbjct: 6 KGLIAAALSNILFVVLFLYGIWMKPMTGTEVFAWRMVAMLAALFVLMGMVGGWQAADRFI 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ ++ K ++ + A F+++ + +G + YF+ P+ + G ++ KE
Sbjct: 66 RGVGRDWKRWLLIFLPTPVFASQLWLFVWSPVNGEGVNVAMGYFLFPLAMMLCGWIWFKE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RLN LQ A +L + L G + V + + +G + +
Sbjct: 126 RLNRLQTAAVMLACAGVAWEWLRMG-AFSWATVWVFGTYPVYYLLRRRLGVPPLVGLTLD 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ I V F+ F++ G+ ++ + + ++ G+
Sbjct: 185 LMVIAPCALVYIVFFTDTLGLIADMPVLAGFVVLLGINSAVAMHLNLKANQLLPVAVFGM 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
M Y P+L+ SV L +P+ I +G++ + + + + + +
Sbjct: 245 MSYLEPVLLFAVSVTFLGEPLQPGALISYGLIWSGLCLMMANGWVKARQK 294
>gi|167577134|ref|ZP_02370008.1| hypothetical protein BthaT_03302 [Burkholderia thailandensis TXDOH]
Length = 307
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 66/279 (23%), Gaps = 6/279 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L + R L + + + ++ +
Sbjct: 21 IWGSAFVAQRLSLAVIGPFLFTGLRFLLGAAVLAPLLGLNGAARAHCAAVARDRALLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +LAV L + F + V+ +G F + ALL
Sbjct: 81 LALGGLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPVIGVFFRHRT-GVGTWLGALLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A V + + +
Sbjct: 140 AIGLYFLSVDEHFSMLYGDWFQLAGAIVIAAHVIAVGHLVRRHDPLVLSFMQFVVCGALC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ L G L + + + A + ++ +
Sbjct: 200 LALGLAIEPIDRSTLVRALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ L + + +++ ++V L
Sbjct: 260 AIAGWAALGETLSLRALAGCALMLAGLLVCQLLPGHARR 298
>gi|91776828|ref|YP_546584.1| hypothetical protein Mfla_2478 [Methylobacillus flagellatus KT]
gi|91710815|gb|ABE50743.1| protein of unknown function DUF6, transmembrane [Methylobacillus
flagellatus KT]
Length = 304
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 96/299 (32%), Gaps = 15/299 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S +G LF + I + ++ + ++E V + +++ R+ +S+P A+ Y
Sbjct: 10 SSRQQALGVLFALVSAIGFSAKAIFVKLAYVEPVDAVTLLALRMAFSVPFFIVAMFY--- 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++ + +LV + L L F+ P + V + +
Sbjct: 67 -GQEKAVAMQRRDWLAVLVLGFIGYYLASFLDFLGLQYISAGLERLILFLYPTMVVLISA 125
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKT 187
+ +ER+ ++A LL ++++ +H L A A ++ Y
Sbjct: 126 LLFRERIGRTVMVALLLSYAGIVLVFVHDFSMSGDGLFLGGGLVFASAFAYAVYLVGAGH 185
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
F + + + L
Sbjct: 186 TIARIGAMRFTAYAMTVACLACIAQFLLTHPLDALRQSGRVYVLTANMALFSTVLPAFAL 245
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ +KR ++ P+ I + L + + ++ + +V++ +++ L
Sbjct: 246 AAAMKRIGSMQTSMIGALGPVATIYLAYVFLGEQLSLIQFLGSVLVLVGVMMISLRKKK 304
>gi|315634940|ref|ZP_07890222.1| DMT superfamily drug/metabolite transporter RarD [Aggregatibacter
segnis ATCC 33393]
gi|315476492|gb|EFU67242.1| DMT superfamily drug/metabolite transporter RarD [Aggregatibacter
segnis ATCC 33393]
Length = 290
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 114/292 (39%), Gaps = 6/292 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL--- 80
+ G F A +L+G ++ L +S ++ +R++++LP V A++ F ++L
Sbjct: 2 LKGVAFSLFASLLFGYMYYFSTLLLPLSGTDIFGYRIVFTLPFVAAAVILFKQKMALIAH 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK + P F+ ++ F++A SF Y + P++ V + K
Sbjct: 62 LKRIQRQPHFALAFFFTGALMGFQMWLFLWAPNNGSSLSVSFGYLLLPLVMVAAARIIFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ ++ +A + + ++ G + F + +
Sbjct: 122 ERISRIKFLAVFIAAVGVISNIALKGEISWEALVICVGYTTYFVVRRMW--KMTDLAAFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ F + + N + L+ GL++ + ++ +G
Sbjct: 180 LEMLTLLPFCIYFAWQVDIAQVQQSNPNILVLLLLLGLISGTALNSYILASNHLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P LM+ S+ I + ID +F +V+AM++ + ++ + +
Sbjct: 240 LLGYVEPCLMVGVSLLI-GEEIDAQSYPLFICLVLAMLLIITDGILQAKTRQ 290
>gi|295425940|ref|ZP_06818617.1| DMT superfamily drug/metabolite transporter [Lactobacillus
amylolyticus DSM 11664]
gi|295064370|gb|EFG55301.1| DMT superfamily drug/metabolite transporter [Lactobacillus
amylolyticus DSM 11664]
Length = 318
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/301 (10%), Positives = 90/301 (29%), Gaps = 12/301 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L +++ + + R++ S +
Sbjct: 15 TQKQRRLWAFLAALACVMWGISGLFAKALFNISPEITPMWLSQIRMVTSGIVLIILAGIV 74
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
A ++ + L F+ + + + FV P +
Sbjct: 75 GQ--KPFGTMKNKHDAWVIIAYGIFGLLPVQLFYFIVVQKANASIATILQFVGPFFVMGY 132
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ K+ + L ++AA+ + ++++ H ++ V + A
Sbjct: 133 LAITHKQVMRKLDVVAAICAFIGVVLLATHGNFNHFAITPDVLFWGLLSAVGVATNTLIP 192
Query: 195 GFFI------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + + F + +
Sbjct: 193 ISVLKRVSSLVVTGWGLISAGICLMIVHPQMPKISSDPRVWFYTAAVIIIGTIIPFQLMT 252
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST +++ P V SV + + + + +VV++ + +
Sbjct: 253 NSLRFIKASTASLLDAFEPFSATVGSVLVFGLVMMPMDWVGSILVVLSAMALNISPKKKD 312
Query: 309 G 309
Sbjct: 313 K 313
>gi|262278212|ref|ZP_06055997.1| permease [Acinetobacter calcoaceticus RUH2202]
gi|262258563|gb|EEY77296.1| permease [Acinetobacter calcoaceticus RUH2202]
Length = 314
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 121/293 (41%), Gaps = 5/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G A I +G+ YTQ L Q+ + R++ +LP + + + ++
Sbjct: 3 KGVSLSVMASITFGVLYFYTQLLSQLDSEQTFGWRIIATLPVLTLFMWWSGDLGYIKNIY 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV E
Sbjct: 63 QRILAKPSLLLLLITTSVLTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++ Q +A +L ++ + G A+ + F + + G F
Sbjct: 123 KISKFQWVAIILAVIGVGHEIWRLGSIAWETALVAVGYSAYFLLRKTIKTDNLGGFWWDL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ +P Y+ G F+ L ++G G+L++ + + L G+
Sbjct: 183 LIILPIAIYLTHTGLL-PYSKFIDQPSLALVIVGLGILSAIGLGSYILASRFLPLVVFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ ++ +L + I + + A+ V +L ++ + + K
Sbjct: 242 LGYLEPVLLALA-SLVLGESIGQEEWFTYIPIWCAVFVLVLEGAVHLYQQRQK 293
>gi|259417263|ref|ZP_05741182.1| membrane protein [Silicibacter sp. TrichCH4B]
gi|259346169|gb|EEW57983.1| membrane protein [Silicibacter sp. TrichCH4B]
Length = 313
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/310 (13%), Positives = 102/310 (32%), Gaps = 13/310 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ K S ++ A L+ I + + Q V + + R + LP + +
Sbjct: 1 MVKSLTSHRPLLAITLKVTAIGLFTIMSGLIKEITQTVPTGQAVFFRSFFVLPVILVWLA 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ L+ + + + + G AL + + TP+ ++
Sbjct: 61 LRGDLPNGLRTK-----SPMLHFWRGLVGTSAMGLNFAALAILPLPEVTALGYATPIFTL 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFAR 185
L ++ L ER+ ++I A + ++ ++IM A+ V +A
Sbjct: 116 VLAALLLGERIRIIRISAVAIGLVGVVIMLSPRLGGSEAFQDTAFIGAMLVLTAAALRGF 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I + ++ ++ + + + + + + P L LI G + +
Sbjct: 176 VQIHIRKMVQSEETAAIVFYFSVTASLLSLLTLPFGWIMPDTPLLLLLISTGFIGAVAQI 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + A S + +Y + L +V + V +V++A + +
Sbjct: 236 LITSSYRFAPASLLAPYDYVSMLFALVIGYIWFAEWPSAVMLAGAALVIVANGIVIWRES 295
Query: 306 INSGKNKTKK 315
K
Sbjct: 296 RLGLDRGKAK 305
>gi|257455212|ref|ZP_05620447.1| integral membrane protein domain protein [Enhydrobacter aerosaccus
SK60]
gi|257447174|gb|EEV22182.1| integral membrane protein domain protein [Enhydrobacter aerosaccus
SK60]
Length = 296
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 91/277 (32%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
I+WG T T+ L +S ++++ +R +++ +F S + L
Sbjct: 12 FLALFVVIVWGTTLASTKVLLADMSPIQILLYRSVFAYGLLFAMSPRLQTFSSAKNEVLY 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + + + + + + +
Sbjct: 72 FLSGLCGITLYFLLENTALLYTYSSNAALLVTASPLFTVLIASFIIKTHAFSKLLLIACV 131
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + ++L+ M+L +G+ +A ++ + + +
Sbjct: 132 MALIGVALVLANQPMSLTNGMLGNILALLSGLAWSFFGFANSAIKDELNPMVRMRKVFLY 191
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
I A Y++ G + I L G+ ++ F +++ K + +
Sbjct: 192 GIITASLYMLVTGEAFINLHAFTPINLANLLFLGGIASALCFVLWTNANKHLGVVKTSLY 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P + ++ V +L + I + ++ +A+ +
Sbjct: 252 IYFIPFIAVLLGVVLLGETITISTILGGILIALAVFL 288
>gi|163735818|ref|ZP_02143247.1| integral membrane protein, putative [Roseobacter litoralis Och 149]
gi|161390904|gb|EDQ15244.1| integral membrane protein, putative [Roseobacter litoralis Och 149]
Length = 290
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 86/292 (29%), Gaps = 10/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + A +L+ + + + L + + +++ + S + + L
Sbjct: 1 MDNLRGAALMVLAMLLFALEDMLIKLLAVDLPIGQIVGMLGVGSAVLLAILLKIQRQALF 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ TI V + S TP+ ++FL
Sbjct: 61 TAALFTPAIMLRAIGELVGTIGFVTA------IALIPLSTASAILQATPLFVTLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+E + + A ++ + ++++ L++ + +
Sbjct: 115 QEAVGWRRWTAIIVGFMGVMLIIRPGLEGFSWLSLFAVQGVIGLGIRDLATRRVPPETSS 174
Query: 200 MCVLAIPALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + L + + +L L+ F + ++ ++
Sbjct: 175 LQLSFWAFLVLIPSAAIMMWFNDTTLITPPPSTLFYLGAALLIGIFAYYCIVAAMRVGEI 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S V Y+ L +V + I + D + + I+V + + L
Sbjct: 235 SFVTPFRYSRILFALVIGISIFGERPDALTLLGAAIIVASGLYTLWRERRVR 286
>gi|115379524|ref|ZP_01466617.1| membrane protein, putative [Stigmatella aurantiaca DW4/3-1]
gi|310820478|ref|YP_003952836.1| hypothetical protein STAUR_3217 [Stigmatella aurantiaca DW4/3-1]
gi|115363473|gb|EAU62615.1| membrane protein, putative [Stigmatella aurantiaca DW4/3-1]
gi|309393550|gb|ADO71009.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 296
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 14/290 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ P + L++ A +LW + L ++ ++ S R L + +F
Sbjct: 6 PATTAPMLRPRLYLLGAAVLWSTAGAAIK-LSTLNAFQLASGRSLIAALMLFLVF----- 59
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + ++ AT A FI+A F P+ + L
Sbjct: 60 -------SDGRRRPTVRMLGVATAYAATVVLFIFANKLTTSANAIFLQDTAPLYVLLLSP 112
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L ER + + +A + +L L + V + TI +
Sbjct: 113 LLLGERPSRGEWVAVPVFLLGLSLFFFDQLSSGQLQGNLVAMGSGVAFALTILGMRAAST 172
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ L + G + + L + +F G++
Sbjct: 173 EGSAILIWGNLLAGLSVLGPALQGP-TPTLMDLGLLAFLGVFQLGMGYALFHRGLREVPA 231
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ P+L V + + + + GI+++A L V
Sbjct: 232 VETSLLVLLEPVLNPVWAFLVAGEQPGPWALLGGGIILLATAWRTLLGVR 281
>gi|33862916|ref|NP_894476.1| integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9313]
gi|33634832|emb|CAE20818.1| Integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9313]
Length = 304
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 93/306 (30%), Gaps = 15/306 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
+ + + G + A + + + + + L + V E++ R L SL
Sbjct: 7 NNQPQTNSQWRGFKSLLLAALAFSLMTVCVKHLGGRLPVAEILFARSLISLAI------- 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + +L+ + AL + + + P
Sbjct: 60 -TRFMLSRVGVSPWGHRKRLLLLRGLLGTAALFCVFDALASLPLATATVLQYTYPTFVAL 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLL------IMTLHSGIPLLSLAIAVTWSAYCFARKT 187
+FL+ER++ IA L L + + A A
Sbjct: 119 AAWMFLRERIHPRIGIAVFLGWLGITLVLKPAWLGTSFTGYSPLSVSIALSGALFTALAY 178
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ V ++ ++ L V G L D L+++G GL
Sbjct: 179 VCVRELSKQEHQLVIVFYFPLTSVPIALLFLGNQGVLPLGIDWLWILGIGLFTQLGQIWI 238
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ G+ +T G + Y L + V + +P+D I +V+ A ++ N
Sbjct: 239 TEGLTLLPAATAGSIGYFQVLFATLWGVLLFAEPVDGWFVIGALLVLGATLISFRSRQEN 298
Query: 308 SGKNKT 313
K T
Sbjct: 299 ILKQST 304
>gi|147669575|ref|YP_001214393.1| hypothetical protein DehaBAV1_0935 [Dehalococcoides sp. BAV1]
gi|146270523|gb|ABQ17515.1| protein of unknown function DUF6, transmembrane [Dehalococcoides
sp. BAV1]
Length = 287
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + W + LE S + R L + + + L
Sbjct: 6 LIALIFTTLFWASAFAAIRVGLEDYSPSHMALLRFLVASVALVIYALITRMRLPD----- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + ++++ Y T S P+ SV L F K++L
Sbjct: 61 -KRDLPAIFLLGLVGISLYHSALNYGEKTVTAGAASLIIAAAPIFSVLLARFFYKDKLTP 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIE 199
+ LL ++I+TL G L +A ++ + + GF
Sbjct: 120 AGWLGILLSFGGIVILTLGEGQTLSFEPHAFFVLLAAICTSLYIVFQKPLLKKYSGFEFS 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L +V+ E + + + ++SY + +A+ S V
Sbjct: 180 TYAIWAGTLLLMVFAPGLFKEISEAPPSSTWAVVYLGIFPTAISYLLYSYALSKARTSQV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPI 282
Y P+ IV + F L +
Sbjct: 240 ISFLYLNPVFAIVIAFFWLGEIP 262
Score = 35.7 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 28/105 (26%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M +L + + + S +YG K
Sbjct: 35 MALLRFLVASVALVIYALITRMRLPDKRDLPAIFLLGLVGISLYHSALNYGEKTVTAGAA 94
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ AP+ ++ + F K + + + +V+ L
Sbjct: 95 SLIIAAAPIFSVLLARFFYKDKLTPAGWLGILLSFGGIVILTLGE 139
>gi|116490697|ref|YP_810241.1| DMT family permease [Oenococcus oeni PSU-1]
gi|116091422|gb|ABJ56576.1| permease of the drug/metabolite transporter (DMT) superfamily
[Oenococcus oeni PSU-1]
Length = 300
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 102/298 (34%), Gaps = 11/298 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+G + LWGI + TQ+L ++V ++S R+L++ + +
Sbjct: 2 MEKNKKLGLFYGVLGPFLWGINGVVTQYLLKVVDINVNWLLSVRLLFAGTALILYVFLTD 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+L + M++F + +I A+ L + + PV +
Sbjct: 62 R-KNLFRLLANKQVYFQMIIFIIFGDFLSQYTYIIAIAKSNAALATILTSLNPVFVIIFY 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AYCFARKTI 188
K + +I+ + +L ++ H L ++ A + I
Sbjct: 121 VFLQKRVPQRIDVISVFVALLGTFLLVTHGSFNHLEISPAGLFWGLLAAAVYAFGTIYPI 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + + + + L + + +F ++
Sbjct: 181 GLIGEYGPLPVTAISLFVSGIAFNFYRPFFIALPTMSLSNWFLLIFFTIISTAFGTAMWF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ +T+ ++ P+ ++ SV +L P++ + + G+V++ +V+ L T
Sbjct: 241 LSLHLIGPTTMSLLSAVEPMTAMILSVLLLSVPMELIDYLGAGLVILMIVLQSLKTRK 298
>gi|317178471|dbj|BAJ56259.1| hypothetical protein HPF30_0162 [Helicobacter pylori F30]
Length = 298
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 102/302 (33%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|229189035|ref|ZP_04316063.1| Transporter, EamA [Bacillus cereus ATCC 10876]
gi|228594455|gb|EEK52246.1| Transporter, EamA [Bacillus cereus ATCC 10876]
Length = 320
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R L ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWLIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLYFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 36.8 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WLIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|226947976|ref|YP_002803067.1| integral membrane protein [Clostridium botulinum A2 str. Kyoto]
gi|226841094|gb|ACO83760.1| integral membrane protein [Clostridium botulinum A2 str. Kyoto]
Length = 293
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 100/285 (35%), Gaps = 12/285 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ G L+ + + S ++ R + VF + +S
Sbjct: 9 LLSMLIVGSIGLFVRSI-PFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNI----KAN 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S L+V+W A + Y+ PV+ + L + LKE L+ L+++
Sbjct: 64 LWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLC 123
Query: 151 ALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ L + + + + + +G + L
Sbjct: 124 IVAALVGLACIAGVSKKAGANDFVGILYGVGSAVLYATVIFLNKCLKDIKGIESSIVQLG 183
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ + + S G + P L LI + V+ ++ ++ +V +
Sbjct: 184 VSAISLLAYVLMSEGFNLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVAALS 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P++ I+ + L + + V+ I +++ A +
Sbjct: 244 YIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKK 288
>gi|116074625|ref|ZP_01471886.1| hypothetical protein RS9916_28864 [Synechococcus sp. RS9916]
gi|116067847|gb|EAU73600.1| hypothetical protein RS9916_28864 [Synechococcus sp. RS9916]
Length = 323
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 80/293 (27%), Gaps = 19/293 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S + + + + + + L + V E++ R L S+ +
Sbjct: 24 SQSAQQWRACGLLILCALAFSLMTVCVKHLGGALPVAEIVLVRSLISIAITLVMLRRVR- 82
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ G L + F AL + + P ++
Sbjct: 83 -------VSPWGQQRGRLFVRGVLGTTALLCFFEALARLPLATATLLQYTYPTLTALSAW 135
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARK 186
+ L E + +A L+ + ++++ + + A A
Sbjct: 136 LLLGEPIRRRIGLAVLMGWIGVMLVVQPEWLGGAAAPAIPDLTATAVALGLGGALLTALA 195
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ V + ++ L V L+L+G GL
Sbjct: 196 YVSVRQLSAREHPLVIVFYFPLVSVPATLPFLWGQAMWPTPEQWLWLVGVGLFTQLGQIW 255
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ + + Y + + V +PI + V+ A ++
Sbjct: 256 LTEGLAALPAARATSINYVQVVFASLWGVLFFAEPITGAVVLGAICVLGATLI 308
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 55/166 (33%)
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R +I + L + + A F+ T+ V G
Sbjct: 1 MRCEGWPLICKARMQALLKAIRGSQSAQQWRACGLLILCALAFSLMTVCVKHLGGALPVA 60
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + +L + L G+L + F + R L+T
Sbjct: 61 EIVLVRSLISIAITLVMLRRVRVSPWGQQRGRLFVRGVLGTTALLCFFEALARLPLATAT 120
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+++YT P L +S+ +L +PI + + I +++ + P +
Sbjct: 121 LLQYTYPTLTALSAWLLLGEPIRRRIGLAVLMGWIGVMLVVQPEWL 166
>gi|83720552|ref|YP_441915.1| hypothetical protein BTH_I1368 [Burkholderia thailandensis E264]
gi|83654377|gb|ABC38440.1| membrane protein, putative [Burkholderia thailandensis E264]
Length = 306
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 89/283 (31%), Gaps = 14/283 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A + W + + L + E+ R+L + V L +D +
Sbjct: 17 IALLTWSSSYAAIAYCLGAFTPSEIAFSRLLVASISFAVLWVVKRFALPAARDLPR---- 72
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F L V+ YA + ++P + L +++L+E + ++
Sbjct: 73 --IAIFGILGLTVYHLCLAYAETRIPSGTAAILIALSPGATALLSAIWLRESIGMIKAAG 130
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
++ + + ++ + SG L A+ VG + A F
Sbjct: 131 FMIALAGVALVVVTSGQGLRMEPAALWVLVSVAGLAIYSVGLKPILSRVGSLGVTAAAFA 190
Query: 211 VVWNGFSGGEHFFL-------GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ L + + +++ ++RA S V
Sbjct: 191 AATVAAAPFGAPHLAAAIGDASHARLAALAWLGIAPTFVGYIAWNFALRRAPASQVTSFL 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y +P L I+ S L + + + GI +I + + I
Sbjct: 251 YLSPPLSILISWVWLGEQPLLITLLGGGITLIGVALVNARGKI 293
Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 2/144 (1%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
G L ++ IA+ + +A +G+ I L + ++ + V
Sbjct: 9 GRALGAIGIALLTWSSSYAAIAYCLGAFTPSEIAFSRLLVASISFAVLWVVKRFAL--PA 66
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
I L + +Y R T I+ +P + S L++ I +
Sbjct: 67 ARDLPRIAIFGILGLTVYHLCLAYAETRIPSGTAAILIALSPGATALLSAIWLRESIGMI 126
Query: 286 RTIVFGIVVIAMVVYLLPTVINSG 309
+ F I + + + ++ +
Sbjct: 127 KAAGFMIALAGVALVVVTSGQGLR 150
>gi|257092683|ref|YP_003166324.1| hypothetical protein CAP2UW1_1061 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045207|gb|ACV34395.1| protein of unknown function DUF6 transmembrane [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 301
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/288 (9%), Positives = 72/288 (25%), Gaps = 17/288 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + +V L + R +L + L
Sbjct: 9 YLLLVLTTLFWSGNMVLGRAIRNEVPPLSLAFWRWAIALLLTLPLALPHLRSQWPL---- 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + L P+ ++ L VFLK+ L
Sbjct: 65 LRRGWKAVVSLGLLGVGGYNTLAYVGLNYTPATNAVLLNSFIPIATITLSWVFLKKHLRR 124
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++ + LL + + + G + A+ +
Sbjct: 125 VESLGVLLSFVGVATIVCRGQFATLASLSLNVGDLWMLAAVFTWALYTIGLQWRPAGVDP 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
V+ + AL + G + + ++ +
Sbjct: 185 MLLLAAFTVVGLLALAPAYAWEIAQGRTIAVSPGSLAGIAYTGVFPGFLGYVFYNRAVGE 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + + P+ I+ S L + + ++ + +
Sbjct: 245 VGASKASLFLHLMPVFGIILSAIFLAEIPQSYHYGGIALIFAGIYLTT 292
>gi|239831833|ref|ZP_04680162.1| Hypothetical protein OINT_1001056 [Ochrobactrum intermedium LMG
3301]
gi|239824100|gb|EEQ95668.1| Hypothetical protein OINT_1001056 [Ochrobactrum intermedium LMG
3301]
Length = 307
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/301 (14%), Positives = 99/301 (32%), Gaps = 13/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++F+ A + I T++L +++ + + R +++ +
Sbjct: 2 PQSANFRASIFMLLAMGTFTIGDTITKYLLTEMNSGQYMLVRGIFATALIGLLAWRHG-- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+N M + V +IY+L S + TP++ ++
Sbjct: 60 ------ALRNLSLERMTILRVVGEVVATITYIYSLGHLSQAFCSAVFQATPLVVTLGAAL 113
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV----GSS 193
FLKE++ + L+ ++ +LI+ SLA A T + +
Sbjct: 114 FLKEKVGWRRWCCILVGLVGVLIIIRPGTDGAASLAAVAVLLASVCFAATRDIATRRVPA 173
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + L A+ + + + +L + ++
Sbjct: 174 HVPTLFLSTLTAGAITLTGGALTVPMGGWQPLGMTAVGAMAIAAVLLLVGYHFIILAMRE 233
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++S V Y++ L I S I + D I +VV + V + + + +
Sbjct: 234 GEVSFVSPFRYSSLLWAIGLSTLIFGEAPDIYTIIGSILVVGSGVYMVYRENVLKKRERN 293
Query: 314 K 314
K
Sbjct: 294 K 294
>gi|229155263|ref|ZP_04283374.1| Transporter, EamA [Bacillus cereus ATCC 4342]
gi|228628188|gb|EEK84904.1| Transporter, EamA [Bacillus cereus ATCC 4342]
Length = 303
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSKKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLTVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|218233428|ref|YP_002365254.1| transporter, EamA family [Bacillus cereus B4264]
gi|218161385|gb|ACK61377.1| transporter, EamA family [Bacillus cereus B4264]
Length = 316
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 97/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFLLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNIRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
>gi|145341262|ref|XP_001415732.1| DMT family transporter: drug/metabolite [Ostreococcus lucimarinus
CCE9901]
gi|144575955|gb|ABO94024.1| DMT family transporter: drug/metabolite [Ostreococcus lucimarinus
CCE9901]
Length = 309
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 96/294 (32%), Gaps = 8/294 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ NA ++G + F ++ + +F + V +V+ R L++ + +
Sbjct: 20 ANANAPSAFLVGIAWFFAHQLIGVGNDVIMKFTGANLGVAQVVFLRFLFATLTMVPVMAA 79
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
V + + + +LA ++ L + + F P+ ++
Sbjct: 80 GGKE-------SFATDRVPLHIARSALLAGGIFLYVKGLTIAPIAVVTTLNFTIPLFTLV 132
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L VFLKE+++ + I L+ ++++ G + + V SA FA +
Sbjct: 133 LARVFLKEKVDATRWIGTLVGFAGVMVVMQPGGAVFNPMWLVVLLSATMFASLDVLNKVF 192
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G ++ ALF + + + + G + +
Sbjct: 193 VGKESFWAMIFYTALFTTLIVAYPALTSWVPPTTLQYGLMAVLGAGANGLLYCLLKSFSM 252
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S + YT +L + + + + I+V + + +
Sbjct: 253 VDASALAPFRYTELILSATVGFLLFGEVPASSTLLGALIIVPSTLYVVWKENQK 306
>gi|332885360|gb|EGK05609.1| hypothetical protein HMPREF9456_02411 [Dysgonomonas mossii DSM
22836]
Length = 304
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 95/298 (31%), Gaps = 21/298 (7%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ WGI+ ++ + + + +R L + + + N
Sbjct: 10 LLVLGTAFWGISFPLSKDAFDSIHPYTFMFYRFLIATFILALIFY--------KQIPKIN 61
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + + L + + L SF V V+ +F+K +
Sbjct: 62 SETIRKGAIAGLFLFMGICWQTVGLKYTSSSNASFIAGVEVVLIPLFAFLFMKRSIQTRM 121
Query: 148 IIAALLIILSLLIMTLHSGIPLL------------SLAIAVTWSAYCFARKTIPVGSSEG 195
+A LL + L I+ + SG ++ + + V +
Sbjct: 122 WVACLLALAGLYIIAMASGFSDFRIGDLMVFVGSLFYSVYILYVGKISTDSRSEVAAIPF 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I++ V A+ A V G L L L ++++CI + K +
Sbjct: 182 VIIQLSVCALLAGVLTVSTQGVGAVSMSLPFDVWKALLFVAILSTAYMYCIQNAAQKYIE 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + P+ V + IL + I + I +++ AM++ + + + +
Sbjct: 242 AEKIALTYLCEPIFATVFAYIILNEEITSRTVIGGTLILSAMLLAEVNVMAVYRRIRA 299
>gi|324328327|gb|ADY23587.1| integral membrane protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 309
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 91/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 8 YVIMLLVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTSL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGISLMLSLIGVIVVITSGSMNTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMSGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + + IV+I + + + + + K
Sbjct: 244 LGASKASMYLNLTPIVATCISVVLYGAAVTWQQIVGMAIVLIGVYIATVQSNKDIKK 300
>gi|295704253|ref|YP_003597328.1| drug/metabolite exporter family transporter [Bacillus megaterium
DSM 319]
gi|294801912|gb|ADF38978.1| transporter, drug/metabolite exporter family [Bacillus megaterium
DSM 319]
Length = 303
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 85/298 (28%), Gaps = 13/298 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFA 70
+ S G L V +WG++ Q+L + + ++ R+L S +
Sbjct: 1 MEGVQTSSRRAWGLLLVIIGATMWGVSGTVAQYLFQHKSFNAEWLVVVRMLVSGLLLLAI 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
S ++ + +L+F + + A+ + + +P+
Sbjct: 61 A---SKQRNIFAIWKTKEERTSLLLFGVIGMLGVQYTYFAAIEAGNAATATVLQYTSPIF 117
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCF 183
+ +V ++ +++I+ +L+I + L I ++ +
Sbjct: 118 IIGYLAVQARKWPVKVEMISVVLVIAGTFFLATSGNFNELSITGWALFWGIGAAVTSAFY 177
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + + + + + L
Sbjct: 178 TLQPKRLLAKWSSIEVVGWGMVIGGASFSFIHPPWHIAGEWSLLSLCAVLFVIIFGTLIA 237
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F + +K S ++ PL SV L + +++ + +
Sbjct: 238 FYCYLESLKHISASEAIVLASAEPLSAAALSVLWLHVTFGWTEWLGTILIIATVFLLS 295
>gi|256845311|ref|ZP_05550769.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_36A2]
gi|294785389|ref|ZP_06750677.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_27]
gi|256718870|gb|EEU32425.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_36A2]
gi|294487103|gb|EFG34465.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_27]
Length = 301
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/301 (11%), Positives = 86/301 (28%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G +F A +WG + ++++ R + ++ + ++
Sbjct: 1 MNKKRYFGDFMLFLAAFIWGTAFVAQVTGMDRIGPFTFNMARSVVAIICLGAYLIITKAK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L V + + L T F +I FL +
Sbjct: 61 LPKDIGVLLQGGLVC-----GFFIFMGTSLQQIGLQYTTAGKTGFITSFYILIIPFLTMI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVG 191
FLK +++ L I+ ++ + L ++ + + + +
Sbjct: 116 FLKHKIDLLTWISIIIGFIGLYLLAIPNLKDFAINRGDFVVFLGSFCWGGHILIIDYYSK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP--DTLFLIGYGLLNSFVFCIFSY 249
+ + + + E L NI L + + +
Sbjct: 176 KVSPVELSFLQFVVLTILSGICALLFENETATLNNIFLSWKSIAYAGFLSSGIAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K ++ + ++ F+L + + + IV +A++ + I
Sbjct: 236 GQKYTNPIVASLILSLEAVFAALAGYFMLDEVLTSREFFGCSIVFLAIIFSQISKDIFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|168187259|ref|ZP_02621894.1| putative integral membrane protein [Clostridium botulinum C str.
Eklund]
gi|169294894|gb|EDS77027.1| putative integral membrane protein [Clostridium botulinum C str.
Eklund]
Length = 297
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 94/277 (33%), Gaps = 13/277 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G ++ + +G P++ + V++ R L + +F +
Sbjct: 1 MKRINGIIYALLSSTAFGFMPIFAKIAYNHGSNCFSVLTFRFLLAALILFLYFLIKKVDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K LK +G + +++T + + + L + +FV P + + V
Sbjct: 61 KINKRQLKEVFLIGSIGYTSTGIGL-----FLSYKYISVGLATTMHFVYPAAVILMSYVL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
++ +I A + + + ++ G + L I +T++A A +
Sbjct: 116 YRDNFTKNKIFALVFSLAGVYVLAGKKGQGIDPLGIFLAILSGLTYAACIIAMNKDEIKK 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + ++++ + + L + +F +K
Sbjct: 176 LDNTVVVFYFSLFSGITLLIFSILTNNLIISFDFYINASILGISIISTITSTILFIKALK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
S+ I+ P++ I+ + + K+ +
Sbjct: 236 IIGASSTSILATCEPIVSIIMGILLFKEKLTLAIIFG 272
>gi|167746385|ref|ZP_02418512.1| hypothetical protein ANACAC_01094 [Anaerostipes caccae DSM 14662]
gi|167654378|gb|EDR98507.1| hypothetical protein ANACAC_01094 [Anaerostipes caccae DSM 14662]
Length = 301
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 103/291 (35%), Gaps = 10/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ I ++ ++ ++ ++R+LW++ + ++ L+ L+ T +
Sbjct: 9 MAMIVIGIIGISLSAIFVKY-SAAPSSVTAAYRLLWTVLLMTPVVLGKKRYLAELRQTDR 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V + S LA+H+ F+ +L ++ + ++F+K L+
Sbjct: 68 K--TVCLCAVSGIFLALHFTFWFESLSHTTVASSTAIVCTEVIWVALGFTIFMKGHLSRT 125
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+I+ ++ + +++ + A + A I
Sbjct: 126 ALISIVITLAGSILIAFSDSAGSHGSLYGDMLALAAAVFVAVYTLIGRIARTEMSTVSYT 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V ++ V G F G P + L+ IFS+ +K + V
Sbjct: 186 YIVYGFCSISLVFALLVQGNSLFGHGKSPAVVGLLLSIFSTLLGHSIFSWCLKFFSPAFV 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P++ V +VF+ ++ ++ + I + +++Y +G+
Sbjct: 246 SASKLCEPVVASVFAVFLFQELPAVLQILGGLITIGGVLLYSRAESREAGQ 296
>gi|160893467|ref|ZP_02074252.1| hypothetical protein CLOL250_01018 [Clostridium sp. L2-50]
gi|156864862|gb|EDO58293.1| hypothetical protein CLOL250_01018 [Clostridium sp. L2-50]
Length = 289
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 77/277 (27%), Gaps = 8/277 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
L++ + + + ++ + + +E R L + ++
Sbjct: 2 REKTKAILYIILSGVGFSFMNVFVRLSGDLPTIEKAFFRNLVAAFIALVVLI------RS 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ML + + YA+ S ++P +V LK
Sbjct: 56 DLGLHYEKRHIPMLFMRSICGTLGIMCNFYAVDHMNIADASILNKLSPFAAVIFSIFLLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--FI 198
E+ + Q A + + + L + S + ++ A
Sbjct: 116 EKASLKQYAALIGVFIGALFVIKPSLNFTDFAPGLIGFTGGMGAGAAYAAVRYLSNHGAK 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F + + + L+ G + + A
Sbjct: 176 NPQIVFFFSAFSTLVMLPFVIAFYKPMSFFQLFCLLMAGASAAVGQFSITAAYSHAPAKE 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ I +Y+ + + Q D + I + +++
Sbjct: 236 ISIFDYSQIITSAILGFIFFSQIPDALSFIGYAVIIG 272
>gi|126348581|emb|CAJ90305.1| putative integral membrane protein [Streptomyces ambofaciens ATCC
23877]
Length = 326
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 79/272 (29%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L+ + E + +V R+++ V A+ L T + G
Sbjct: 28 SLVWGFSFLFIKVGTEAFAPFQVTLGRLVFGTAVVVVAMAVKRERLPRGAWTWAHLAVAG 87
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ + + + + + V L R I L
Sbjct: 88 FLLNALPFSLFAFSELTIPSSLAGICNATSPLWGMALSLVALSEDRPTRRRVAGLGIGFL 147
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L + G+ + A+A+ S + G + L++
Sbjct: 148 GVLTVLGVWQGFHGLDVTGTALALLASLSYPIGWIYVRRTLAGSSHSHLSLTGAQLSLAT 207
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L +P L F I + +T ++ Y P
Sbjct: 208 LQLAFVTPLFTSMPSSFPLLPLLSVAALGVLGTGLAFLIQYDLVAEVGPTTAQMVTYFTP 267
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + V +L + + + IV+ +
Sbjct: 268 VIATAAGVVLLGESLSWSTPLGAVIVLAGAAL 299
>gi|289168183|ref|YP_003446452.1| hypothetical protein smi_1344 [Streptococcus mitis B6]
gi|288907750|emb|CBJ22587.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 298
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 100/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGILMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 MLAFLKDR-KSLLSLLIFALIGLFLNQFAYLTAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
K +I++ +L I ++ H + LS+ A + + I +
Sbjct: 121 DKVAPTLGEIVSIILAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQTAIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + + +++ A+ + L ++
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFLGMTMILFAVTLISLKDLVLEK 298
>gi|227545052|ref|ZP_03975101.1| DMT superfamily drug/metabolite transporter [Lactobacillus reuteri
CF48-3A]
gi|300909280|ref|ZP_07126741.1| DMT superfamily drug/metabolite transporter [Lactobacillus reuteri
SD2112]
gi|227184973|gb|EEI65044.1| DMT superfamily drug/metabolite transporter [Lactobacillus reuteri
CF48-3A]
gi|300893145|gb|EFK86504.1| DMT superfamily drug/metabolite transporter [Lactobacillus reuteri
SD2112]
Length = 303
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 14/305 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
S ++GT + A WGI+ L+ + L ++ + + R++ + +
Sbjct: 1 MSNKKVLGTAMIITACTFWGISGLFAKALFNVSSSITSMWLTQVRMVSAGIILVLLSQIR 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ L + + L + A+ + + F+ P +
Sbjct: 61 GEHPFQIFKALHSAWIIFAYGVFG--LVPVQYAYFMAVQYGNASIATILQFIGPFFIIAY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARK 186
+VF ++II+A++ L + I+ H L++ ++V A
Sbjct: 119 QAVFRHLPPRRIEIISAIIAFLGVFIIVTHGQFNHLAMTLSVLIWGLISAIGVATNTLIP 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + + H L + F +
Sbjct: 179 QNMLRKGRVPSLIITGWGLLFAGLTLVLIHPSQPHIPNVPSVWLYVLGILVIGTLIPFQL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ +K +T +M+ PL + SV I + + +V++A++ +
Sbjct: 239 ANNSLKYINATTFSLMDAFEPLSATIGSVLIFHLQMTGADILGSILVIVAVLAINIRIPH 298
Query: 307 NSGKN 311
K
Sbjct: 299 KKIKE 303
>gi|254487374|ref|ZP_05100579.1| membrane protein [Roseobacter sp. GAI101]
gi|214044243|gb|EEB84881.1| membrane protein [Roseobacter sp. GAI101]
Length = 325
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/316 (9%), Positives = 79/316 (25%), Gaps = 13/316 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
++ + A L+ + + + V + + R ++ P + +
Sbjct: 1 MAATSIEHRPGRAIALKLGAVFLFTVMAAIIKIATETVPAGQAVFFRSFFAFPMIILWLW 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
LK + + + + G + L + F ++
Sbjct: 61 QRGDLRHGLKPSNLMGHVWRGIFGTTAMGLTFGGLSLLPLPEVTAIGYATPLFTVVFAAL 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
FLG RL+ + + ++I+ T+ + + +
Sbjct: 121 FLGERVRLFRLSAVAVGLVGVLIVLYPRFTIGGDAVSQMATLGAFMVLGASIMRALVQVH 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF----- 247
AI F + S + L + I
Sbjct: 181 VRRLVQTDSTAAIVFFFSLTATVLSFLTLPLGMLVDWPALTWIMPGLPVGLLLICSGLVG 240
Query: 248 -------SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + +S + +Y + + + I + I G+V+ V+
Sbjct: 241 GVAQIMITSSFRFGPVSMLAPFDYASMIFATLIGWLIFSEIPTPAILIGAGLVMTGGVLI 300
Query: 301 LLPTVINSGKNKTKKS 316
+ K+
Sbjct: 301 IWRERQLGLDRSKAKA 316
>gi|307325676|ref|ZP_07604877.1| protein of unknown function DUF6 transmembrane [Streptomyces
violaceusniger Tu 4113]
gi|306888804|gb|EFN19789.1| protein of unknown function DUF6 transmembrane [Streptomyces
violaceusniger Tu 4113]
Length = 316
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/277 (10%), Positives = 77/277 (27%), Gaps = 6/277 (2%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + + L V R+L+ + +V L +
Sbjct: 37 SLIWGFSFLLIKVGNEAFAPLYVTLGRMLFGTAVLLVTLVVKRERLPRGARVWGHLAVAA 96
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + + + + + V + + + +
Sbjct: 97 FFLNALPFSLFAYAELTIPSTLAGICNAASPLWGMLLAVVVVSDDRPSRQRVAGLGLGFI 156
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE-----GFFIEMCVLAIPA 207
+++ L SG L +A+ SA + + L +
Sbjct: 157 GVLIVLGAWQGFSGQDPLGTVLALIASASYAVGWQYVRHTLSDTGHSHLSMSGGQLLLGT 216
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + +P L L F + + +T ++ Y P
Sbjct: 217 VQLALVAPVFATTPTSFPLLPLLSVLALGALGTGVAFLVQYGLVDEVGPTTAMMVTYFVP 276
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ + V IL + + + +V+I + +
Sbjct: 277 VIATTAGVAILGEHLTWNTPVGAAVVLIGAALTQRRS 313
>gi|254441812|ref|ZP_05055305.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
gi|198251890|gb|EDY76205.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
Length = 295
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 90/292 (30%), Gaps = 8/292 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+G +++ + + + + +V + R L L + I +
Sbjct: 1 MIGVIWMVLTGLNFVAVTAIVKHIGNEVPAAQGAFLRYLLGLVFLIPMI-------RPIL 53
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + + +A+ + +++PV ++ LKE
Sbjct: 54 AAHLTKRQFKLFAARGVVHTIAVILWFFAMARIPIADVTAMNYLSPVYVTLGAALVLKEA 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L ++ A ++ ++ +I+ + IA+ +A FA + G V
Sbjct: 114 LPPRRLAAVVIALVGAIIILRPGFREIDPGHIAMLGTALMFAAGYLIAKQLSGEVSAAVV 173
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + ++ + + D +L + + A L+ +
Sbjct: 174 VGMLSITVTIGLAPFAWAVWVPVAWSDIGWLFLVACFATAGHYSMTLAFAAAPLTVTQPV 233
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + + +P+D I++ ++ K +
Sbjct: 234 TFLQLIWAVAMGALLFNEPVDGWVVFGGAIIMASISFITWREAQIKTAAKRR 285
>gi|116253510|ref|YP_769348.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258158|emb|CAK09259.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 305
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 82/285 (28%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A + WG + + L +S + + R ++ + V +
Sbjct: 6 YICLVIATLCWGGNSVAGKLALGHISPMMLTFLRWFLAVAMIAVISV----PQLRKDWPV 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L + + A+ + P++ L +F + ++
Sbjct: 62 VRKNLPLLLFYGVIGYTLFNAMLYSAVQYTTAINVAIEQAGIPMLIFLLNFMFFRTGISL 121
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + + ++ + + H L L +S Y + P
Sbjct: 122 AQCLGFGMTLIGVALTAAHGDLATLLQLSLNRGDGLMLIAIAAYSVYTIFLRWKPPLDWR 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ ++ G + + L + ++ G+
Sbjct: 182 TLMAVPALGAMLTSLPLLLWEAGRGAARWPDQAGWVITLYTAIFPSLVAQILYIKGVVAI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ P+ + SV ++ + + + I + + + +
Sbjct: 242 GANRAGLFINLVPVFGTLLSVALIGERLQSFHVIALVLTLGGIAI 286
>gi|283783620|ref|YP_003374374.1| hypothetical protein HMPREF0424_1176 [Gardnerella vaginalis 409-05]
gi|283441036|gb|ADB13502.1| putative membrane protein [Gardnerella vaginalis 409-05]
Length = 358
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 83/292 (28%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
++ ++G WG ++ L VS L++ R + + +F
Sbjct: 63 STNAILVGIFLTLLGGAFWGANATVSKILMSTYRVSPLQIACVRQI-AAGMLFVITAAAC 121
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + M V + + ++ + + + + +
Sbjct: 122 TPKQLSGAVKTGRTWISMAVTGVVCVLLTQVSYLCTIDWTNSGTATVLQSLNLLFVLVYA 181
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTI 188
+ + + I +L +M + L +A S A +
Sbjct: 182 CLHTRRVPTMRETIGVVLAFAGTALMATGGNLSSLSLPVMGLLWGLADAASTAALAIMPV 241
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G + I + ++ L LF + +F
Sbjct: 242 KLIAKWGNLTVNGITFIISGCIMLPFVRPWETMPALDLRAMLLFTFTVIAGTFGAYWLFL 301
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI R ++ + P+ +++V + FG++ + M++
Sbjct: 302 EGIMRVGSVRGTLLGASEPVTAAITAVMFTGAVFSWADFVGFGLIFVMMILL 353
>gi|47566614|ref|ZP_00237436.1| hypothetical protein BCE_G9241_4480 [Bacillus cereus G9241]
gi|47556644|gb|EAL14976.1| membrane protein, putative [Bacillus cereus G9241]
Length = 309
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 90/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 8 YVMMLFVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVFI----KSEWNTSL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGISLILSLIGVIVVITSGSMNTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 244 LGASKASVYLNLTPIVATGISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 300
Score = 35.7 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 13/143 (9%), Positives = 36/143 (25%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ + + FA + + + + L
Sbjct: 5 NRMYVMMLFVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVFIKSEWNTSLL 64
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
L F G+ ++ T P+ + + ++ K+
Sbjct: 65 LKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSIK 124
Query: 286 RTIVFGIVVIAMVVYLLPTVINS 308
I + +I ++V + +N+
Sbjct: 125 VGISLILSLIGVIVVITSGSMNT 147
>gi|319781040|ref|YP_004140516.1| hypothetical protein Mesci_1306 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166928|gb|ADV10466.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 301
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 92/292 (31%), Gaps = 16/292 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F+ +LWG + + ++ VS + ++ R + ++ + +
Sbjct: 6 YIFLLLTTLLWGGNSVAGKLAVDHVSPMTLVFLRWVLAVAIMLPI----GWKTIQKDWPM 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ A+ + F AL S P++ + VF + R+N
Sbjct: 62 VRKHWFVLVALGASGFTLFNTIFYTALNYTTAINVSIEQAAMPILIMTANFVFFRLRVNW 121
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
QI+ +L I +++ H + L +S Y + PV +
Sbjct: 122 AQIVGVVLTIAGVILTACHGDPRRLLTLELNFGDAIMLVAVFLYSGYSVGLRLKPVMRWQ 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + V A+ G+ T+ + + + G +
Sbjct: 182 SLMLALSVSALVTSLPFFLWEVLAGKVIMPDARGWTVIVYTAIGASVVSQIFYIRGNELI 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ G+ P+ + SV I+ + + + +V+ + +
Sbjct: 242 GANRAGLFINLVPIFGTLLSVLIVGETFQLYQALALVLVLGGIGLAEYSGRK 293
>gi|300814374|ref|ZP_07094645.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511482|gb|EFK38711.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 294
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 94/286 (32%), Gaps = 5/286 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + I+WG + + L++V + R + ++ ++F + K+ +
Sbjct: 8 VIMLLISAIIWGFSYVAQALGLQEVGPFTFNTARSFVACIFLWLTYLFFKKTSNYYKNEI 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ K+ + +L F + + T ++ + + FL +++
Sbjct: 68 FSLKSTIIFGSVCGLLMTVATNFQQMGIIGTTTGKAGFLTATYIVLIPIFDFFLGKKIKP 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----GFFIEMC 201
I+ ++ ++++ + + V +SA FA + + +
Sbjct: 128 RIILCVFFAMVGTYLLSVKENFTVNGYDLLVLFSAIFFALHIMVMTKLPNDCQAILASLT 187
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L +V F L L + F + IK + +
Sbjct: 188 QFFVVMLVSLVIAIFKEEIVLSSLKAAIPAILFVGVLSSGVGFTLQMIAIKDIDPTIGSL 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + V IL Q ++ I+++ ++ LP+
Sbjct: 248 VSSLESVFAAVGGWMILGQKMNLREITGCIIILVVTIIAQLPSKKK 293
>gi|262164724|ref|ZP_06032462.1| permease [Vibrio mimicus VM223]
gi|262027104|gb|EEY45771.1| permease [Vibrio mimicus VM223]
Length = 297
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/275 (10%), Positives = 79/275 (28%), Gaps = 1/275 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ + L + +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVAFAAFSLLLVAQLLKKSLPIRQHWRHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L + +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFFWHGTPLTRKALAGLLLGVTGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ + + L + A+ +Y A F A +V
Sbjct: 133 AVIVGWDVAAIGPEASLPIICAALAAGSYGLATNYTKQAPQVSAFENAHGSMWAACVWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ +I + + + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMLFVPLRQWPSSIEWSAVIALGVICTGLAYLIYFRLVKEIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+IL +PI I +V+ ++ ++
Sbjct: 253 WGYWILDEPIGLNTLIGTVLVLAGTMLVTGFSLRR 287
>gi|261401741|ref|ZP_05987866.1| integral membrane protein [Neisseria lactamica ATCC 23970]
gi|269208114|gb|EEZ74569.1| integral membrane protein [Neisseria lactamica ATCC 23970]
Length = 284
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/275 (10%), Positives = 80/275 (29%), Gaps = 3/275 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + ++ + ++ R+L + V A G + +
Sbjct: 1 MFYQILALIIWSSSFIAAKYAYGGIDPALMVGARLLIAALLVLPACRRHIGKIPREEWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A V + + V + A + L +
Sbjct: 61 LLIAAFVNYVLTLMLQFVGLKYTSAASASTIVGLEPLLMVFVGHFFFNDKARAYHWICGV 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L++ G L + + + + + F + +
Sbjct: 121 AAFVGIALLMAGGAEEGGEVGWFGCLLVLLAGIGFCTAVRPTQRLIARIGAPAFTSVSIA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + L + + + +++ G+ R + G++
Sbjct: 181 AASLMCLPFSLALAQSYTVHWSWQGVVSLLYLGVGCSWYAYWLWNKGMSRVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
P++ ++ +V IL + + V + +V+ A +
Sbjct: 241 SLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATL 275
>gi|225389236|ref|ZP_03758960.1| hypothetical protein CLOSTASPAR_02982 [Clostridium asparagiforme
DSM 15981]
gi|225044697|gb|EEG54943.1| hypothetical protein CLOSTASPAR_02982 [Clostridium asparagiforme
DSM 15981]
Length = 301
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 83/279 (29%), Gaps = 9/279 (3%)
Query: 33 AYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL--KNPK 89
+WG+ + ++ V R L + I + G ++
Sbjct: 12 TATIWGVAFVAQSAGMDYVGPFTFNCARCLIGALVLVPLIFFMDRGKKRQREIPVENKKV 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ V L + F + + F VI LG F K+ + L
Sbjct: 72 LILGGVCCGLALFLASNFQQFGIQYTTVGKAGFITACYIVIVPLLGLFFGKKC-SPLIWG 130
Query: 150 AALLIILSLLIMTLHSGIPLLS-----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
A ++ ++ L ++ + G ++ + + + ++G +
Sbjct: 131 AVVMAVVGLYMLCMTGGSGGINRGDLLMLVCAVLFSVHILVIDYFSPMADGVKLSCIQFL 190
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + ++ L + + + G K + ++
Sbjct: 191 VAGVLSGLFGFLFEEPKLSQLLAAWVPVLYAGVMSCGVAYTLQIVGQKGMNPTVASLILS 250
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +++ F+L Q ++ I+ A+V+ +P
Sbjct: 251 LESSIAVLAGWFLLGQQLNAKEITGCVIMFGAIVLAQVP 289
>gi|164688436|ref|ZP_02212464.1| hypothetical protein CLOBAR_02081 [Clostridium bartlettii DSM
16795]
gi|164602849|gb|EDQ96314.1| hypothetical protein CLOBAR_02081 [Clostridium bartlettii DSM
16795]
Length = 314
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 90/290 (31%), Gaps = 15/290 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + +G ++ A I W + S EV R++ F I +
Sbjct: 1 MKSKIGYFYILLAGIFWSTLGFLVSKISDYNFSPEEVAFFRMVGG----FIVISIYGKIT 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + ++ ++ + + +V+PV +
Sbjct: 57 MPTMFKITKKGILYVFAIGIVCQFIFNIAYMGSISMVGASMAAVLLYVSPVFVAIFSKIV 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPV 190
KE++N ++I++ + ++ + I + L +A A +
Sbjct: 117 YKEKINKIKILSLIFCVIGAFLAVTGGKIEIKELNIGGIIAGIMAAITYAMLPIFNKNAL 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + I A+ L + + + ++S G
Sbjct: 177 KEMDNITMSAYAFLIAAIIMCFRVNPIHTISKIDNMRVLMYILFIGIIPTAMSYIVYSKG 236
Query: 251 IKR-AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I + +LS G++ +L ++ +L + V+ +V + +
Sbjct: 237 ILKGVELSIAGVVASIELVLSVIIGWTLLGEDFSVVKIFGVLFMVASTFI 286
Score = 40.7 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 34/113 (30%)
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + ++ + F + + + I
Sbjct: 36 EVAFFRMVGGFIVISIYGKITMPTMFKITKKGILYVFAIGIVCQFIFNIAYMGSISMVGA 95
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S ++ Y +P+ + + S + K+ I+ ++ + VI + + I
Sbjct: 96 SMAAVLLYVSPVFVAIFSKIVYKEKINKIKILSLIFCVIGAFLAVTGGKIEIK 148
>gi|313668030|ref|YP_004048314.1| hypothetical protein NLA_6920 [Neisseria lactamica ST-640]
gi|313005492|emb|CBN86928.1| conserved hypothetical integral membrane protein [Neisseria
lactamica 020-06]
Length = 300
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 91/298 (30%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDVLGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 LLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + A + + ++ + + P ++L G G+ + K
Sbjct: 175 LAGEPGWRVVFYLSATGVAMSSVWATLTGWHTLSFPSAVYLSGIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPIAFKQR 292
>gi|309776277|ref|ZP_07671266.1| transporter [Erysipelotrichaceae bacterium 3_1_53]
gi|308915957|gb|EFP61708.1| transporter [Erysipelotrichaceae bacterium 3_1_53]
Length = 294
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 88/295 (29%), Gaps = 14/295 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + + ++WG + T L+ +S ++ R + +
Sbjct: 1 MKKIYANMILVIVTVVWGGGFIATDGALDALSPFYIMMIRFVGAAVFPLLICW------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + +G + + L + + F + L +F V +L +FL
Sbjct: 54 -KKLRNLDRTTIGHGIITGIFLFLAFAFQTFGLKYSTPSKNAFLTATNVVFVPYLLWLFL 112
Query: 140 KERLNHLQIIAALLIILSLLIMTL-----HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
R + ++IA+LL I + ++TL GI + I + A +
Sbjct: 113 HRRPSRKELIASLLCIAGIALLTLKKDALMLGIGDILSLICALFFALHIIALERYSAHVD 172
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + + + + ++ K
Sbjct: 173 TVCMTALQMLTAGVISTICALTMEQPPVSFDWHAAGNVAYLIFVSTLLAYLLQTFAQKYT 232
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ ++ L + S +L + + I ++ +++
Sbjct: 233 TANSASLILSMEALFASIFSFLLLGEVMSLPMIIGACLIFSSILYIEYKPKRRKK 287
>gi|227822259|ref|YP_002826230.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227341259|gb|ACP25477.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 302
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 89/301 (29%), Gaps = 9/301 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + G +F+ A + + + ++ +++ R L + +F F
Sbjct: 2 HSSANIRGIVFMTLAMAGFSCNDALVKSVTGAMNTGQIMFIRGLMTTLMIFVLAYRFGAL 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + A+ +I AL S P+ ++
Sbjct: 62 RPVRTVFRPVIMLRIAME------ALASLTYISALGHIPLANASAIMQALPLAVTLGAAL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
FL E + + A ++ + +LI+ A+ V + A + +
Sbjct: 116 FLSEPVGWRRWTAIVVGFVGVLIVLRPGPEGFTPAALTVVACVFFTATRDLCTRRIGSDV 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + V V + ++ L G +L + ++
Sbjct: 176 PSLFITVTTASVTTLVGAALIVPFGGWQPVSMISFSHLAGASVLLMLGYQTIVLAMRDGD 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+S V YT L I + + D + I+V + + + + ++
Sbjct: 236 ISVVAPFRYTGLLWAITIGIVFFSEAPDRWMLVGVAIIVGSGLYTFYRESLRGRQAVAQR 295
Query: 316 S 316
S
Sbjct: 296 S 296
>gi|332704708|ref|ZP_08424796.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
gi|332554857|gb|EGJ51901.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
Length = 299
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/303 (11%), Positives = 84/303 (27%), Gaps = 17/303 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ E G L A I+W + + L + V + R W +
Sbjct: 1 MKYEGKQPVPWTGFLCALGATIIWSGNFIVARGLFDSVQPATLAFLR--WGTAFAALLPL 58
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + +L+ + + + A + + +P+ +
Sbjct: 59 AAIPAWRERRVI--RRHFIFLLITALLGVTLFNTLIYLAARSTSALNLALISTTSPMFML 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSA 180
L +FL E + ++ + + ++ G L+ A + +
Sbjct: 117 LLARMFLGEAVTPARLAGMAAAVCGVALLVTRGELSRLASLQFAAGDLLMLSAAVLFAAY 176
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
R+ F + L + L L +
Sbjct: 177 SILVRRKPRELGQASFLLSTFGLGVLCLAPWAAWEVLRSGLPSPEPHIIGAVLYIGLGAS 236
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F +++ + S GI+ Y+ P + + +L +P+ +++ ++V
Sbjct: 237 LAAFFLWNKAVAAIGPSRAGIIYYSLPAFSGLEAFLLLGEPVGWAHLASGLLILGGILVA 296
Query: 301 LLP 303
Sbjct: 297 TRR 299
>gi|294794070|ref|ZP_06759207.1| transporter [Veillonella sp. 3_1_44]
gi|294455640|gb|EFG24012.1| transporter [Veillonella sp. 3_1_44]
Length = 295
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 80/281 (28%), Gaps = 11/281 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G ++ + +L+ ++ + L + E+ R + V +
Sbjct: 2 AKKGLIYALLSALLFSTMNVFVKLLGTNIPPGEIAFARGFFGTVAVLIIMYVKGIRF--- 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + G+LV AL+ + + + T + ++FLKE
Sbjct: 59 -----SKENRGLLVMRGLYGGFGMVCNFIALVHIKLSDATILFQTTGIFVFIFSALFLKE 113
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +I++++L+M S V A + +
Sbjct: 114 SIPKGAGKWLGVILIAVLVMVNPFSYESFSWYALVAILGAALAAAAYTTIRTISKRGQHS 173
Query: 202 VLAIPALFYV--VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
I A F + + G E + D L + G ++ +
Sbjct: 174 NFEIMAYFMITGMIAGLVTTEQLVMPQGTDWLIIFAIGGISVVAQFFLTGAFVTTNAVVA 233
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++Y + I + + + I+ V+
Sbjct: 234 QFLQYVGVFISSFYGFLIFGESLSIATVGAGIAMFISSVML 274
>gi|229176598|ref|ZP_04304013.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
MM3]
gi|228606874|gb|EEK64281.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
MM3]
Length = 313
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 100/286 (34%), Gaps = 18/286 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFLAGGICLL----FSFEQLKRSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIQL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L++T+ S +++ A ++ + +
Sbjct: 124 NYWIGIVLGAIGVLLITIPSSNVDQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 KVFTTLTLIIGAVILLPFAMAEIFYYGFPKIETWKTGFSVMYLVIGATILAYWFWNRALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
S G+ PL+ I +S+ +L + + I +V+ ++
Sbjct: 244 TVSASVSGLYLNALPLISIAASIVLLNESLTWRIGIGGSLVLFGVI 289
Score = 41.0 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L + ++++
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFLAGGICLLFSFEQLKRS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKQVPWKRMSLLSFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I +++ +P+
Sbjct: 121 IQLNYWIGIVLGAIGVLLITIPS 143
>gi|229193772|ref|ZP_04320709.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
ATCC 10876]
gi|228589704|gb|EEK47586.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
ATCC 10876]
Length = 311
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 104/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 9 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKELQKSVVH 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 65 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRL 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 125 NYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 185 EVFTTLTLIIGAVILLPFALVEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALE 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 245 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGV 289
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 48/136 (35%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ L +AV A + S + F + L ++++ + +P
Sbjct: 9 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKELQKSVVHKKVP 68
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + F SYGI V I++ PL+ I+ S LK+ I I
Sbjct: 69 WKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRLNYWI 128
Query: 289 VFGIVVIAMVVYLLPT 304
+ I ++ +P+
Sbjct: 129 GIILGAIGVLFITIPS 144
>gi|182412729|ref|YP_001817795.1| hypothetical protein Oter_0907 [Opitutus terrae PB90-1]
gi|177839943|gb|ACB74195.1| protein of unknown function DUF6 transmembrane [Opitutus terrae
PB90-1]
Length = 307
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 82/292 (28%), Gaps = 13/292 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ A W + L + + L V R L++ + +
Sbjct: 21 RAIGLLVIASFCWSLGGLLIKAV-DWPPLAVAGMRGLFAGLFLLAT------------NR 67
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ A A F+ A + PV G+ + ER
Sbjct: 68 PLRFTFSRAQLIGALGYAACTVTFVAATKLTTAANAILLQYTAPVWIALFGAWLIGERAT 127
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++++ + + L ++ + S+ + +
Sbjct: 128 RADWLTIVVVLAGMTLFFAGGLDFSGVLGNSIAILSGVCFAAMTLALRSQKDQSPVESII 187
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ L + L + L+ + + +++ I+ I+
Sbjct: 188 LGNLLAFLVGLPWIVSAPPLNAVGWFALLLLGIVQLGVSYWLYARAIRHVTALEASIIPV 247
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P+L V + +L + ++ + IV+ A+ + + ++ + +
Sbjct: 248 IEPILNPVWVMLMLGETPTSLALLGGVIVLTAITLRAIASIRGAASRSAPHA 299
>gi|270307603|ref|YP_003329661.1| hypothetical protein DhcVS_160 [Dehalococcoides sp. VS]
gi|270153495|gb|ACZ61333.1| hypothetical protein DhcVS_160 [Dehalococcoides sp. VS]
Length = 297
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 81/290 (27%), Gaps = 12/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++T+ L + + S R+L + +K +
Sbjct: 6 YLLLLLGVFGIAAASVFTR-LADAPPVIITSLRML--AATLLLMPFAAGPVYQAVKRLSR 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+++ + ++ + F++ +L + PV+ + + +ERL+
Sbjct: 63 RNLL--LIILAGFLVGIDQFFWVSSLEYTSIASSVILVTSHPVLVAVMSYIMWRERLSPK 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSEGFFIE 199
I L + ++ L + + + +
Sbjct: 121 AIGGVLAAFGGMALINLATAQVGEQAFLGNILALAATIPTTGYLIIGRQMRNRIDFLPYI 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A + SG E + + + + + ++ V
Sbjct: 181 TLLYGSAAFILLAGAFISGEEFSGYPSTTYLMIFLLAVISQLVGHSSLNMALRLVPALVV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ I+ L + + + +V+ ++V +L
Sbjct: 241 SVAILGEPVGAIILGYIFLGEGLTLNEFLGGMLVLAGILVVMLNQPRTEK 290
>gi|153807434|ref|ZP_01960102.1| hypothetical protein BACCAC_01714 [Bacteroides caccae ATCC 43185]
gi|149129796|gb|EDM21008.1| hypothetical protein BACCAC_01714 [Bacteroides caccae ATCC 43185]
Length = 305
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 102/294 (34%), Gaps = 18/294 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G LF A ++WG+ + L++ S L V + R++ + + ++
Sbjct: 3 KSKNLHGHLFALTANVMWGLMAPIGKSALQEFSALSVTTFRMIGAAAAFWMLSIFCKQ-- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + S L + G FI+ L S P++++ + +++
Sbjct: 61 ----EHVNHRDMLKIFFASLFALVFNQGIFIFGLSMTSPIDASIVTTTLPIVTMIVAAIY 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKT 187
LKE + + +++ + + LI+ L S G L +A +
Sbjct: 117 LKEPITNKKVLGIFVGAMGALILILSSQAASGGNRNLIGDLLCLVAQISFSIYLTVFKGL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S+ M V A + S + + + L + +
Sbjct: 177 SQQYSAVTINKWMFVYASICYIPFSYYDISTIQWTSISTVAIIQVLYVVLGGSFLAYLCI 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
K + + V + Y P++ ++++ + + + +V + + +
Sbjct: 237 MTAQKLLRPTVVSMYNYMQPIVATIAAIIMGIGSFGWQKGLAIALVFLGVYIVT 290
>gi|228473980|ref|ZP_04058721.1| integral membrane protein DUF6 [Capnocytophaga gingivalis ATCC
33624]
gi|228274494|gb|EEK13335.1| integral membrane protein DUF6 [Capnocytophaga gingivalis ATCC
33624]
Length = 291
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 93/279 (33%), Gaps = 4/279 (1%)
Query: 24 MMGTLFVFCAYILWGITPLY---TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L F + +G+ PL+ + E SV + +R L + + F + Y L +
Sbjct: 5 VKGYLCAFISAFTYGLIPLFMIPIKKEESFSVDATLFYRFLIASGAIVFFLFYQKERLRI 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+G+L + ++ + F + +I + + +
Sbjct: 65 SFREGLIMSLLGILYALSAEFLFLAYDYLSPGIASTIFFSYPIIVALVLILFYKEKLTIP 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ L ++ + ++ L+ I L + A S G I
Sbjct: 125 TLLSLLLVVVGVGVLSIKKGEALNY-IGLGISLLGALVYALYILIVNKVRIESSGVKISF 183
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ +L++++ + + + + S Y ++ +
Sbjct: 184 YSMLFSSLYFLIKSLLLRESIIISSWVLAGDLTLFAIITTSLSLVTLVYAVRYIGSTPTA 243
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
IM P++ ++ SV + + + I +++ +++
Sbjct: 244 IMGAFEPIVAVLISVGLFGEQLTPSLVIGGMVIITGVLI 282
>gi|217959172|ref|YP_002337720.1| transporter, EamA family [Bacillus cereus AH187]
gi|217065654|gb|ACJ79904.1| transporter, EamA family [Bacillus cereus AH187]
gi|324325712|gb|ADY20972.1| transporter, EamA family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 303
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQLIFSKKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLTVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|149007283|ref|ZP_01830941.1| hypothetical protein CGSSp18BS74_00481 [Streptococcus pneumoniae
SP18-BS74]
gi|307126984|ref|YP_003879015.1| membrane protein [Streptococcus pneumoniae 670-6B]
gi|147761087|gb|EDK68055.1| hypothetical protein CGSSp18BS74_00481 [Streptococcus pneumoniae
SP18-BS74]
gi|306484046|gb|ADM90915.1| membrane protein [Streptococcus pneumoniae 670-6B]
Length = 298
Score = 69.6 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 100/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGVSGTSGQYLMAHGISALVLTNLRLLIAGGILMILAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQANIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + + + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYPIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|288960102|ref|YP_003450442.1| hypothetical protein AZL_a03670 [Azospirillum sp. B510]
gi|288912410|dbj|BAI73898.1| hypothetical protein AZL_a03670 [Azospirillum sp. B510]
Length = 351
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 82/289 (28%), Gaps = 17/289 (5%)
Query: 31 FCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
L P+ + + V + + R L + + G L+ +
Sbjct: 57 IAGSALLASNPVVGRAVAHVVPPIGLAFWRWLIA--FLIVLPFALPGLLAHRHRLRAQWR 114
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+L ++ Y L S Y +P + + L +V+L + + QI+
Sbjct: 115 RYLLLGVLGQGISGAIV--YYGLERTSATNASLIYATSPAMILALAAVWLGDAIRPRQIL 172
Query: 150 AALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LL + ++++ G L+ R++ F
Sbjct: 173 GILLAMAGVVVILTRGDLEALRHLSFNAGDLLVLTGAVSWSVYTILLRQSGTPLPVVTAF 232
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + + + + I +
Sbjct: 233 AANAFAGVLVLAPFYLWETAAVRPVPFSVPTILSIVAVALFASVLALLAYQKTIAMMGAA 292
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y +PL ++S F+L +P+ + +V+ +++ LP
Sbjct: 293 RASTALYVSPLWAALASWFLLAEPLQGFHLMGVLLVLPGVMLATLPARK 341
Score = 39.5 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 41/140 (29%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
A + I L + + H
Sbjct: 56 YIAGSALLASNPVVGRAVAHVVPPIGLAFWRWLIAFLIVLPFALPGLLAHRHRLRAQWRR 115
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+L+ L I YG++R + ++ T+P +++ + L I + +
Sbjct: 116 YLLLGVLGQGISGAIVYYGLERTSATNASLIYATSPAMILALAAVWLGDAIRPRQILGIL 175
Query: 292 IVVIAMVVYLLPTVINSGKN 311
+ + +VV L + + ++
Sbjct: 176 LAMAGVVVILTRGDLEALRH 195
>gi|168178106|ref|ZP_02612770.1| transporter, EamA family [Clostridium botulinum NCTC 2916]
gi|182671531|gb|EDT83505.1| transporter, EamA family [Clostridium botulinum NCTC 2916]
Length = 293
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 100/285 (35%), Gaps = 12/285 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ G L+ + + S ++ R + VF + +S
Sbjct: 9 LLSMLIVGSIGLFVRSI-PFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNI----KAN 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S L+V+W A + Y+ PV+ + L + LKE L+ L+++
Sbjct: 64 LWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLC 123
Query: 151 ALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ L + + + + + +G + L
Sbjct: 124 IVAALVGLACIAGVSKKAGANDFVGILYGLGSAVLYATVIFLNKCLKDIKGIESSIVQLG 183
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ + + S G + P L LI + V+ ++ ++ +V +
Sbjct: 184 VSAISLLAYVLMSEGFKLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVAALS 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P++ I+ + L + + V+ I +++ A +
Sbjct: 244 YIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKK 288
>gi|83942128|ref|ZP_00954590.1| membrane protein [Sulfitobacter sp. EE-36]
gi|83847948|gb|EAP85823.1| membrane protein [Sulfitobacter sp. EE-36]
Length = 325
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/316 (9%), Positives = 80/316 (25%), Gaps = 13/316 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ A L+ + + V + + +R ++ P + +
Sbjct: 1 MQSTTTEHRPGRAIALKLGAVFLFSVMAALIKIATATVPAAQAVFYRSFFAFPMIILWLW 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
LK + + + + G + L + F ++
Sbjct: 61 QSGDLRDGLKPSNLMGHVWRGVFGTTAMALTFAGLSLLPLPEVTAIGYATPLFTVIFAAI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA---YCFARKTIP 189
FLG RL+ + + ++I+ T+ + A I
Sbjct: 121 FLGEQVRVFRLSAVAVGLIGVLIVLYPRFTVGGDSVSQLAMLGAMMVVAASIMRALVQIH 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI---------GYGLLN 240
V ++ +L + + + P G++
Sbjct: 181 VRRLVQTDSTAAIVFYFSLTATCLSFLTLPAGMVINWEPLWWVNPGWQVSALLILSGMIG 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + +S + +Y + L ++ + + I G+V+
Sbjct: 241 GVSQIMITASYRFGPVSMLAPFDYASMLFAVMIGWVLFSEIPTPAILIGAGLVIAGGAAI 300
Query: 301 LLPTVINSGKNKTKKS 316
+ K+
Sbjct: 301 IWRERQLGLDRSKSKA 316
>gi|113970919|ref|YP_734712.1| hypothetical protein Shewmr4_2584 [Shewanella sp. MR-4]
gi|113885603|gb|ABI39655.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-4]
Length = 298
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/276 (10%), Positives = 83/276 (30%), Gaps = 12/276 (4%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
G ++ +F + + +R+L + ++ G + K
Sbjct: 20 GTIGVFARFAA-LPAEHITFYRLLLGALFLMVYMLLTGKGRQIRHKPSKRTLIN------ 72
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+LA F+I A+ Q ++ PV++ ERL I + +L +L
Sbjct: 73 GAMLAGFMAFYIEAIEYTQMATVIMIIYLAPVLASLFAHFVFHERLKRSSIASVVLALLG 132
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAY-----CFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
++M + + + + + L ++ +
Sbjct: 133 FMLMLPVTSSQSFYDNEIMGYFYALLALLTYCGFILINRKPSAASPYQSTLVQLSVGALC 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
L + + T G + Y P++++
Sbjct: 193 LLPLVLTTPLVPSLNQFAWVLAIGFFPGFLAILFAVKALAQLPSVTYGTLSYVEPVVVVA 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ ++ + + T + + ++++A + ++ +S
Sbjct: 253 LAWWLFDEALTTQQMLGVALIMLAGMAQGYLSLRHS 288
>gi|332878014|ref|ZP_08445744.1| putative membrane protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683976|gb|EGJ56843.1| putative membrane protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 313
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 87/305 (28%), Gaps = 19/305 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L +F A WG+ + +S L ++S R + + + +
Sbjct: 3 KDKNLTGHLCMFAACAAWGLMSPLGKDAMAHGISGLALVSFRAVGAALCFWLTSLLGRH- 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K+ + + + + F L S P++++ L ++
Sbjct: 62 ----KEDVAPRDLLMFFFAGMLAIVFNQCCFTIGLSLTSPVNASIVTTTLPIVTMILAAL 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF- 196
FLKE + + +++ + L++ L +G +T C + F
Sbjct: 118 FLKEPVTNKKVLGIFCGAIGALLLILGNGHAAQKGNGNLTGDLLCLTAQCSFAVYLTIFK 177
Query: 197 -----------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
M A + + + + + +
Sbjct: 178 KLIQKYTVVTCMKWMFTYATIVILPFTYKDLAILPWAEIPATTWFETAFVVFVATYLAYI 237
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ G K + + V + Y P++ + SV + +V + +
Sbjct: 238 MMMTGQKLLRPTIVSMYNYVQPIVACIVSVATGLGVFGWSQGAAVLLVFGGVWLVTQSKS 297
Query: 306 INSGK 310
K
Sbjct: 298 RADLK 302
>gi|300215085|gb|ADJ79501.1| Transporter, drug/metabolite exporter family [Lactobacillus
salivarius CECT 5713]
Length = 316
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/308 (10%), Positives = 96/308 (31%), Gaps = 11/308 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G ++ A I WG+ + +++L + VSV ++ ++ S + Y
Sbjct: 2 QTRTHLKGVIYASLAGIFWGMAGIASEYLFQDQHVSVYWMMGVKMSLSALTLLGLAYYLD 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + +G+++FS LA + + + + + + +F
Sbjct: 62 G-KKIFLVFKSFKDILGIVLFSILGLAGVQFTYSMTVNYSNATVATIIQTLGILPVIFYS 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTI 188
++ K+ Q IA + ++ ++ + I + + + +
Sbjct: 121 AIIFKQLPGRKQWIATITALIGAWLLVTKGSFNQLAISKEAIIWRIFLMLTQAGNSVLPV 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + L + + + +F
Sbjct: 181 DLLRRHNPTTISAWAMLVGGIVFEFIHPVWKSVPKFTPAVTLNMLFLIFIGTALSYYLFV 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + +++ PL + I K + + +V+ + + + + N
Sbjct: 241 KSLHLISATEATLLDTFEPLTAALLDFLIFKMQFNWAEILGSLLVISTVFILAVGSEENK 300
Query: 309 GKNKTKKS 316
+ K++
Sbjct: 301 NSDPXKRT 308
>gi|296327433|ref|ZP_06869980.1| DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296155446|gb|EFG96216.1| DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 302
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L +F A +WG + ++++ R + ++ + ++
Sbjct: 1 MNKKRYFGDLMLFLAAFIWGTAFVAQVTGMDRIGPFTFNMARSIIAIICLGAYLIITKSK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L V + + L T F +I FL +
Sbjct: 61 LPKDIGVLLQGGLVC-----GFFIFMGTSLQQIGLQYTTAGKTGFITSFYILIIPFLTMI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
FLK +++ L I+ ++ + L ++ + + G ++ L
Sbjct: 116 FLKHKIDLLTWISIIIGFIGLYLLAIPNLSDFTINRGDFIVFLGSFCWGGHILIIDYYSK 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S V+ + + L + + +
Sbjct: 176 KVSPVQLSFLQFVMLTILSGICALLFENETATMNNIFLSWKSIAYAGFLSSGIAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K ++ + ++ +L + + + + IV +A++ +P I
Sbjct: 236 GQKYTNPIIASLILSLEAVFAALAGYIMLDEVMTSREFLGCSIVFLAIIFSQIPKDIFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|283477762|emb|CAY73678.1| putative DMT superfamily transporter [Erwinia pyrifoliae DSM 12163]
Length = 320
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 88/283 (31%), Gaps = 5/283 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFA----IVYFSG 76
TMM LF A ++W + + ++ + + +R L +L + +
Sbjct: 15 NTMMNFLFPLLAVLIWSVNAIVSKLSAAAIDPAAISFYRWLVALLVLAPFALPGVWRHRQ 74
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L +GM+++ + + + + ++ V+ +
Sbjct: 75 QVKQSWWKLLVLGLLGMVMYQSLAYYAAHSVSALFMGIIAALIPLLTVLLSVVVIRLAPT 134
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + L+ L G+ L + V ++Y +
Sbjct: 135 LGILLGSLLSFCGLVWLVSQGNPAQLLTHGLGKGELMMFVASTSYALYGVLTRRWAIPLP 194
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + I ++ GF L L L + ++ G+ R
Sbjct: 195 NWQSLWMQIFFGVMLLTPGFLLASDVSLNAHNLPLVLFAAIPASVIAPFLWIQGVMRLGA 254
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S+ + P+ V +V L + + + I GI + +++
Sbjct: 255 SSSSMYMNLVPIFTAVIAVSFLHEALHSYHFIGGGIALAGVIL 297
>gi|114705174|ref|ZP_01438082.1| hypothetical protein FP2506_09556 [Fulvimarina pelagi HTCC2506]
gi|114539959|gb|EAU43079.1| hypothetical protein FP2506_09556 [Fulvimarina pelagi HTCC2506]
Length = 293
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 88/290 (30%), Gaps = 7/290 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G L F Y + + L + + + E+ L++ F+
Sbjct: 3 IGILIAFAGYFAFACGDATLKALGDDLPIYEIGFFTSLFA-----ILPALFTKRPEDNWR 57
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ P +L V + A T F+ P+ ++FLKE +
Sbjct: 58 NVFVPNRPFLLSLRVLFGVVGMLSAVLAFTTLPLAEAYALIFLLPIFVTVFAAIFLKETI 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ A + + ++++ L+ A +A C A + + + ++
Sbjct: 118 GWRRWSAVVTGLAGVILVVRPGFQELVPGHFAAISAAICGAGTVLVLRMIGPSERRVTLI 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L V++NG F L + G L + + A S V ++
Sbjct: 178 GSVLLGAVIFNGILMVPTFADPMPFMGLLVFGG-LCIGLGQTGLVFATRFAPASYVAPVQ 236
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
Y+ + V + D ++ + + + + +
Sbjct: 237 YSQIVWAAVLGALFFGEFPDATAYAGMALIGASGLFTFIRERKMTRWWQR 286
>gi|293603621|ref|ZP_06686042.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292818057|gb|EFF77117.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 309
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 95/302 (31%), Gaps = 13/302 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+S+ ++ LF A ++W + + T+ +S + +R W+L G
Sbjct: 1 MSRSDSLAVPARYLLFPLLAALIWSVNMIVTKMAAGVISPAVIGFYR--WALAGAVLTPF 58
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G + + P V +A++ G A + + P++++
Sbjct: 59 ALRGVWTQRRLIW--PYLPKFAVLGGLGMALYQGLAYVAASSTTATNMGIITAMIPLLTI 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFA 184
+G+V L++R + I+ L+ + L ++ G L + + AY
Sbjct: 117 AVGTVVLRQRPTLMAILGGLVSLAGLALLIGEGDPARLLSVGANPGDLLMGLAALAYALY 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + I F L L L + F
Sbjct: 177 GVLLRRWGLPVGPWVSLYVQIGFGVLFQLPAFLMAAPSPLNASNVPLVLYAAIFPSLFAP 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ G+K + I P+ + + L + + + + +++ + T
Sbjct: 237 FLWMQGVKHLGPNRASIFLNLMPVGTVAIASIFLDEKPHLFHIVGGLLALAGVMLAQMRT 296
Query: 305 VI 306
Sbjct: 297 PR 298
>gi|289432130|ref|YP_003462003.1| hypothetical protein DehalGT_0180 [Dehalococcoides sp. GT]
gi|288945850|gb|ADC73547.1| protein of unknown function DUF6 transmembrane [Dehalococcoides sp.
GT]
Length = 300
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 84/290 (28%), Gaps = 12/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++T+ L + + S R+L + + L
Sbjct: 9 YLLLLLGVFGIAAASVFTR-LADAPPVIIASLRMLAATLLLLPFAA----RPVYLAIKHL 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +++ + ++ + F++ +L + PV+ + + +E+LN
Sbjct: 64 SRRNLLLIILAGFLVGMDQFFWVSSLEYTSIASSVILVTSHPVLVAIMSYIIWREQLNPK 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSEGFFIE 199
I L ++++ L + + + S +
Sbjct: 124 AIFGVLAAFGGMVLINLATTQVGEQAFLGNMLALAATIPTTGYLIIGRQMRNSIDFLPYI 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A F + SG + + + + ++ V
Sbjct: 184 TLLYGSAAFFLLAGAFISGDSFGGYPGTTYLMIFLLAVVSQLVGHSSLNMALRLVPALVV 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ I+ L + + + +V+ +++ +L
Sbjct: 244 SVAILGEPVGAIILGYLFLGEGLTFNEFLGGMLVLAGILIVMLNQPRTKK 293
>gi|194015937|ref|ZP_03054552.1| DMT superfamily drug/metabolite transporter [Bacillus pumilus ATCC
7061]
gi|194012292|gb|EDW21859.1| DMT superfamily drug/metabolite transporter [Bacillus pumilus ATCC
7061]
Length = 304
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 93/294 (31%), Gaps = 20/294 (6%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + L+ + LE + +++++HR S + + L
Sbjct: 4 SKQKAYAAAIGYATIIGFSFLFVKIALESANPIDLLAHRFTVSFAAALLLYPFLRKKIRL 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ FS + + F ++ L+ P++++ L + FLK
Sbjct: 64 SIQW---RDLLYIVPFSLLYPVLFFAFQVWGLMYTSSSEAGIIQATIPILTMVLAAWFLK 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER +Q++ +L + ++++ + GI + + A +
Sbjct: 121 ERATWIQVLFTILSVCGVMLLFVMKGIDVKHSHMIGYGLILLSALSSSAYSVFARVITRR 180
Query: 201 CVLAIPALFYVVWNG----------------FSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + F L L +
Sbjct: 181 FHVIELTFVMTFFGFVFFNATALIRHSVNGTMPQFFSPFTQPSFVWSMLFLGILSSLLTA 240
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +Y + + + + V I + + + + V IL + ID I +V+ ++
Sbjct: 241 YLSNYALSQLEAAKVSIFNNLSAFITVAAGVLILHETIDWYHLIGGVLVIGGVI 294
>gi|108762434|ref|YP_631533.1| drug/metabolite exporter family protein [Myxococcus xanthus DK
1622]
gi|108466314|gb|ABF91499.1| transporter, drug/metabolite exporter family [Myxococcus xanthus DK
1622]
Length = 303
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 92/283 (32%), Gaps = 16/283 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + I WG + +E + L +S R + + ++ G L +
Sbjct: 21 LAIVGVVIAWGTNYTVVKEAMETLPPLAFMSLRFTIAALAMGALLLGVEGWKPLPR---- 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P + +L V+ FI L + VTPV+ LG+VF +RL
Sbjct: 77 -PVFLKLLGLGLVGNTVYQVCFIVGLANTSVANSGMLTAVTPVLVATLGAVFGVDRLTRP 135
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFFI 198
I A L ++ +L++ G ++ A A I
Sbjct: 136 LIAALALGVVGMLLVLGGRGASEHGASLIGDGLIVGASLCWAIYTVGIRTVGPEVSALRI 195
Query: 199 EMCVLA--IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ P + V E + + + + + +++
Sbjct: 196 TAISMLTGAPGVVLVGVPELLRLETENIRAGAWAGVVYSALVPLVLAYFTWGRTVQKVGS 255
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S G+ P++ +++ + + ++ + G+V+ +++
Sbjct: 256 SRAGLYNTGIPVVAALTAWAVRGEQPTWMQVLGAGLVLSGVLL 298
>gi|88860898|ref|ZP_01135534.1| hypothetical protein PTD2_10128 [Pseudoalteromonas tunicata D2]
gi|88817111|gb|EAR26930.1| hypothetical protein PTD2_10128 [Pseudoalteromonas tunicata D2]
Length = 303
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/297 (9%), Positives = 83/297 (27%), Gaps = 12/297 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++ +V + I ++ +F + + +R+ V +V ++
Sbjct: 4 SLWPIFYVLVSAIFMATIGIFARFAA-LPAEHITFYRLAIGASCVLLYLVVSRQQRAIWH 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +LA +I A+ ++ P+ + + +ER
Sbjct: 63 KPAWSTVLN------GVMLASFMVCYIEAMHYTSMANAIMLIYLAPLFAAVVAHFLYQER 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFF 197
L ++A +L + +M + S + +
Sbjct: 117 LGIASVVAIMLALFGFAMMMNFKWSFTHAEQEQVGLFYGVLSMLSYGTFILLNRKKTIHS 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + F + L + ++
Sbjct: 177 PYQSTLIQLLVGSLCVLPFVLTHPVAITFNQGLWLLAIGIIPGFLAMLFAVKALRELPAM 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T + Y P+ +++ + I + + ++ + G+++ A + N + K
Sbjct: 237 TFSTLAYIEPVAVVIMAWLIFNEQLGILQQVGCGLIIAAGIAQSFVEHSNKKRRALK 293
>gi|323343255|ref|ZP_08083482.1| hypothetical protein HMPREF0663_10017 [Prevotella oralis ATCC
33269]
gi|323095074|gb|EFZ37648.1| hypothetical protein HMPREF0663_10017 [Prevotella oralis ATCC
33269]
Length = 291
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 104/289 (35%), Gaps = 5/289 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + +G+ PL++ + + + ++ +R + + ++Y
Sbjct: 1 MESNKIRGFTEAIISAAAFGLIPLFSIPVLADGMRLPSLVVYRFTFGALILLLILMYNRQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L L + +L + + + ++ + + + + +I F
Sbjct: 61 SLRLRFGESLRIMFLSLLYAISAVSLISGYAYLPSGVATTLVFSYPVWTAILMIVFFHER 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSE 194
+ L+ L +A + ++ + S + ++L + +T++ Y + V
Sbjct: 121 LTLRTALAIFLAVAGVCLLSGIENGISISSVTGVALELLSGLTYAVYMVTFPAMKVRHLS 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT-LFLIGYGLLNSFVFCIFSYGIKR 253
+ V L +++ F+ G + + + L + +KR
Sbjct: 181 TLKVTFYVFFFTILLLMLYASFTEGGIQPIVSGKQFVNLALLGLLPTAVSNITLIMALKR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + V I+ P+ + + +P+ + I F ++++A+V+ +L
Sbjct: 241 IESTIVAILGAFEPITAMSVGCIVFDEPLTIMSCIGFALIIVAVVLLIL 289
>gi|282882658|ref|ZP_06291268.1| permease [Peptoniphilus lacrimalis 315-B]
gi|281297471|gb|EFA89957.1| permease [Peptoniphilus lacrimalis 315-B]
Length = 294
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 94/286 (32%), Gaps = 5/286 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + I+WG + + L++V + R + ++ ++F + K+ +
Sbjct: 8 VIMLLISAIIWGFSYVAQALGLQEVGPFTFNTARSFVACIFLWLTYLFFKKTSNYYKNEV 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ K+ + +L F + + T ++ + + FL +++
Sbjct: 68 FSLKSTIIFGSVCGLLMTVATNFQQMGIIGTTTGKAGFLTATYIVLIPIFDFFLGKKIKP 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----GFFIEMC 201
I+ ++ ++++ + + V +SA FA + + +
Sbjct: 128 RIILCVFFAMVGTYLLSVKENFTVNGYDLLVLFSAIFFALHIMVMTKLPNDCQAILASLT 187
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L +V F L L + F + IK + +
Sbjct: 188 QFFVVMLASLVIAIFKEEIVLASLKAAIPAILFVGVLSSGVGFTLQMIAIKDIDPTIGSL 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + V IL Q ++ I+++ ++ LP+
Sbjct: 248 VSSLESVFAAVGGWMILGQKMNLREITGCIIILVVTIIAQLPSKKK 293
>gi|257093224|ref|YP_003166865.1| hypothetical protein CAP2UW1_1622 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045748|gb|ACV34936.1| protein of unknown function DUF6 transmembrane [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 88/292 (30%), Gaps = 18/292 (6%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + A + + ++ + V + ++S R+++SLP + S
Sbjct: 10 RLGVVLAVLAALGFSFKAIFVKLAYAAAPVDAVTLLSLRMVFSLPAFLWVGFAASRSAPP 69
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + L L F P ++V +G +F+
Sbjct: 70 LTRND----WGMLGALGLLGYYGASILDFLGLQYISAALERLILFTYPTLTVLIGVLFMG 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF---- 196
+ L ++ A LL + + H +A +T A F G
Sbjct: 126 KSLARREVAALLLSYAGIALAFAHDLRVAGEMATVLTGVALVFGSSLSYALYLAGSGPAI 185
Query: 197 -------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
F + +L + + L + + S
Sbjct: 186 QRLGAARFTALAMLVSTLATQLHFLATQSLSALRQPPTIYAYGLAMAVVSTVLPVFMQSA 245
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+R + ++ PLL IV ++L +P+ + +V+ +++
Sbjct: 246 AIRRIGSAKAVLIGTLGPLLTIVFGWWLLAEPMSAAQLAGAALVLAGVLLVS 297
>gi|254671057|emb|CBA07929.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 284
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A +
Sbjct: 1 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPAC-------RRHVGKI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L+ + + L S + P++ VF+G F ++
Sbjct: 54 PREEWKPLLIAAFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARA 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + ++ + + A + +
Sbjct: 114 YHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + + A + + L + + +++ G+ R
Sbjct: 174 FTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSRVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ P++ ++ +V IL + + V + +V+ A +V
Sbjct: 234 NVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 276
>gi|146306074|ref|YP_001186539.1| hypothetical protein Pmen_1039 [Pseudomonas mendocina ymp]
gi|145574275|gb|ABP83807.1| protein of unknown function DUF6, transmembrane [Pseudomonas
mendocina ymp]
Length = 303
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/301 (9%), Positives = 81/301 (26%), Gaps = 20/301 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + + A + W L + F +++ + R +L + +
Sbjct: 5 NHSRSLAFFGLLLANLCWSGNALVARAFAGEIAPFTLSFWRWCLALALLLPFVAV----P 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+LV +A + A T S P+++ +
Sbjct: 61 LWRHRAAVAKAGWRLLVLGGLGIAGYNSLLYSAAQTTAAINISLVNTCLPLVTFIGAGLL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP---------------LLSLAIAVTWSAYCF 183
L E L+ ++ L ++ L + A+
Sbjct: 121 LNEWPARRAWWGMLVAVVGLAVLISQGQWSRLASLSFNQGDLIMLLAVVDWALYSLLLRR 180
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ +L +P + + G L + +
Sbjct: 181 WAAYLQPIPPLALLGVFILLGVPLILPFYLYELAQGVQLALNVANLSAIAYTAVFASLLA 240
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +++GI+ + + Y P+ + +L + + + ++ +++ P
Sbjct: 241 YLAWNHGIRVVGAAKAALTNYLMPVFTALLGWVLLNESLQLYHWLGAAMIFGGLLLATRP 300
Query: 304 T 304
+
Sbjct: 301 S 301
>gi|221064798|ref|ZP_03540903.1| protein of unknown function DUF6 transmembrane [Comamonas
testosteroni KF-1]
gi|220709821|gb|EED65189.1| protein of unknown function DUF6 transmembrane [Comamonas
testosteroni KF-1]
Length = 301
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 91/298 (30%), Gaps = 8/298 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ ++ + G L A L+ + T+F ++ + ++ + V +V
Sbjct: 9 TLSTSAQSAIRGVLLTIFACALFAVLDSATKFSGKLLPVLMVLWLRFMAQALVTSLLVLP 68
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GLS LK + + A + + + + + P+ V
Sbjct: 69 RHGLSALKTRNLKFQLLR-----AISGLLTTVCAFFCIQNMPLANFTAIWSAAPLFIVVA 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIPVG 191
++F KE+++ + ++ +L+++ + A+ + +
Sbjct: 124 SALFFKEQVSPARWSLLVIGLLAVIAIVRPENDGQALGLAALWPVGLLISGTTYQVLGSR 183
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S L L ++ G + + GL + +
Sbjct: 184 LSRLDSPPTTQLYSTWLPILLTTPLVGLVWQPIDHWQIYAAAAVMGLCSGIGHLMLLQAY 243
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +TV Y+ ++ Q D+ I +V ++ ++ + +
Sbjct: 244 THATPATVAPFLYSQIGFAMLMGWLFFGQLPDSTSLIGMAVVTLSGLMGVWLGIREKR 301
>gi|73748814|ref|YP_308053.1| transport protein [Dehalococcoides sp. CBDB1]
gi|289432835|ref|YP_003462708.1| hypothetical protein DehalGT_0889 [Dehalococcoides sp. GT]
gi|73660530|emb|CAI83137.1| hypothetical transport protein [Dehalococcoides sp. CBDB1]
gi|288946555|gb|ADC74252.1| protein of unknown function DUF6 transmembrane [Dehalococcoides sp.
GT]
Length = 287
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + W + LE S + R L + + + L
Sbjct: 6 LIALVFTTLFWASAFAAIRVGLEDYSPSHMALLRFLVASVALVIYALITRMRLPD----- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + ++++ Y T S P+ SV L F K++L
Sbjct: 61 -KRDLPAIFLLGLVGISLYHSALNYGEKTVTAGAASLIIAAAPIFSVLLARFFYKDKLTP 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIE 199
+ LL ++I+TL G L +A ++ + + GF
Sbjct: 120 AGWLGILLSFGGIVIITLGEGQTLSFEPHAFFVLLAAICTSLYIVFQKPLLKKYSGFEFS 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L +V+ E + + + ++SY + +A+ S V
Sbjct: 180 TYAIWAGTLLLMVFAPGLFKEISEAPPSSTWAVVYLGIFPTAISYLLYSYALSKARTSQV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPI 282
Y P+ IV + F L +
Sbjct: 240 ISFLYLNPVFAIVIAFFWLGEIP 262
Score = 36.0 bits (81), Expect = 7.7, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 28/105 (26%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M +L + + + S +YG K
Sbjct: 35 MALLRFLVASVALVIYALITRMRLPDKRDLPAIFLLGLVGISLYHSALNYGEKTVTAGAA 94
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ AP+ ++ + F K + + + +V+ L
Sbjct: 95 SLIIAAAPIFSVLLARFFYKDKLTPAGWLGILLSFGGIVIITLGE 139
>gi|325660956|ref|ZP_08149583.1| hypothetical protein HMPREF0490_00315 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472463|gb|EGC75674.1| hypothetical protein HMPREF0490_00315 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 286
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 13/290 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + I+WG + + LE + ++++ R + S
Sbjct: 1 MNHYLAIAGLVVVTIIWGGGFVASDMALESLLPFQIMAIRFFLGTVMMGAI--------S 52
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + V L + I L +F + V+ F+ +
Sbjct: 53 IKGLKGIKKQEVKAGALMGAALFTAFALQIIGLQYTTPSKNAFLTALNVVMVPFIAFIIC 112
Query: 140 KERLNHLQIIAALLIILSLLIMTL----HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
K+++ II A++ ++ + I++L G+ I A+ +I V
Sbjct: 113 KKKIGVKGIIGAVMAVVGVGILSLEKNLTLGLGDALTLICAVGFAFQIFFTSIYVKKYRA 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + V+ G F + L + + + + + K
Sbjct: 173 TVLNFIQMLTAFVLSVISMFCFGETQFAVTTKGWLSVLYLGVVSTTLCYLLQTACQKHVD 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ I+ + + S+ IL + I I I++ A+++ L V
Sbjct: 233 ETKAAIILSMESVFGTLFSIIILHEQITLRMVIGCVIILAAVIISNLAEV 282
>gi|296136288|ref|YP_003643530.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
gi|295796410|gb|ADG31200.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
Length = 370
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/301 (8%), Positives = 74/301 (24%), Gaps = 8/301 (2%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFA 70
L+ + + G A +L+G + + L S + + L S G+
Sbjct: 3 SSLTPPSQNASLHQGITLSLVAALLFGASTPLAKLLLADTSPWLLAALLYLGSGIGLAVW 62
Query: 71 -IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ L+ + + + ++ L S + V
Sbjct: 63 RALRAVRSGEAATSHLQAGEWPWLAAAIFSGGVAAPVLLMFGLSRMPAAGASLLLNLESV 122
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCF 183
++ L +E + + I+L +++ L +
Sbjct: 123 LTALLAWFVFRENFDRRIALGMGAIVLGSVVLNWPGQGMRLDWSSLWPGLAVIGACLGWA 182
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + V +
Sbjct: 183 LDNNFTRKVALADASFVAMSKGLIAGAVNLLLAMLVGAQWPTWPIVLAAGALGFASYGVS 242
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+F ++ + AP +V +L + + + G++ + + +++
Sbjct: 243 LVLFVLALRHLGTARTSAYFAVAPFFGAALAVLLLGEALTLGLVLAGGLMALGVWLHVSE 302
Query: 304 T 304
Sbjct: 303 R 303
>gi|251797715|ref|YP_003012446.1| hypothetical protein Pjdr2_3729 [Paenibacillus sp. JDR-2]
gi|247545341|gb|ACT02360.1| protein of unknown function DUF6 transmembrane [Paenibacillus sp.
JDR-2]
Length = 288
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 105/292 (35%), Gaps = 13/292 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
++ + I++G ++ +F+ +S ++ L + V+ +S
Sbjct: 1 MYFVLSMIIFGAVGVFAKFI-DISSGKIALFLSLIGALFLLVVFVWTKQKVSWRSV---- 55
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K L+ ++ L+ +W F A + SY+ PV+ V L LKE+L+ +
Sbjct: 56 KKNAIALLVASIALSGNWIFLFQAYKETTIANAALSYYFAPVLVVMLSPFVLKEKLSLKK 115
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + +L L + + + + + +G +
Sbjct: 116 ALCIGMALLGLFFILQNGRVETTGHQLLGIGYGLIAAGFYTALTLVNKFIRDLDGLANTL 175
Query: 201 CVLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L + + + F+ G + L L+ + F +F G+K ++
Sbjct: 176 LQLGLSVMILFPFVLFTEGFNLISVTGTKVILILVLGIVHGGIGFYLFFAGMKGLNGQSI 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ Y P+ ++ SV ++ + + + I +++ ++ V + +
Sbjct: 236 AVLSYIDPVTSLLISVLVIGEKMTLQQLIGAVLLLGSIWVGEISGEKRRQRQ 287
>gi|167748144|ref|ZP_02420271.1| hypothetical protein ANACAC_02888 [Anaerostipes caccae DSM 14662]
gi|167652136|gb|EDR96265.1| hypothetical protein ANACAC_02888 [Anaerostipes caccae DSM 14662]
Length = 294
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 87/281 (30%), Gaps = 16/281 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L A ++ + L ++ + +RVL+SLP + L
Sbjct: 13 VLLELLAVAFLAAGGIFVK-LSSLTPVSTGFYRVLFSLPLLLPLAFRGLRIL-------- 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K V +L + LA + + + +TP + + +E++ L
Sbjct: 64 TKKDVLILFLAGVFLAGDVALWNLSFSYTSVANANLLTNLTPFTVIPVSYFLFREKIPKL 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGFFIE 199
+ A + ++ + ++ PL S A + A E I
Sbjct: 124 FLAGAAVTLIGVFVLLGGKISPLQSNYFGDFLAFSASFFYAVFILISYRLRDRYESSVIM 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
AL V + + G G L L + ++ + ++
Sbjct: 184 FVSGFGSALALGVTSVLTEGIQIPHGTEQLWPLLGLTLCLQVIGHNLLAHCQGKLSVNLS 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
I+ P++ + S FI + + + IV+ + +
Sbjct: 244 SIVCLCQPVIASLYSYFIFSEVLSLREVLGIAIVIAGVYLV 284
>gi|58039492|ref|YP_191456.1| hypothetical protein GOX1029 [Gluconobacter oxydans 621H]
gi|58001906|gb|AAW60800.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H]
Length = 312
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/291 (18%), Positives = 102/291 (35%), Gaps = 7/291 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F AY + I+ +++ L+ + EV ++ + F + +
Sbjct: 1 MALAFGAYSAFAISDAFSKLLDGSLDPFEVAFFGGVFGFLILPFI-----RKPTESYLDI 55
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
PK GM + A + V + A + F+ P+ L V LKE++
Sbjct: 56 VRPKLRGMWLLRAVCVFVATAASVKAFMLLSMPEALSITFLMPLFVTILSVVLLKEKVTF 115
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+A L +LI+ PL + +A A I + + + +
Sbjct: 116 WAWLAVALGFAGVLIVLRPGVRPLNLGHLCALMAACANAGSVIAYRIASKETVRLSLFGS 175
Query: 206 PALFYVVWNGFSGG-EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +V NG + N +L GYG L + RA + V + +Y
Sbjct: 176 SLMGALVGNGLLMIAHATWPSNTKIWFYLFGYGFLTALGQLCMMLATARAPANRVALPQY 235
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ + S F+ KQP+D + ++ + ++ + I K K+
Sbjct: 236 SQMAWGVALSYFLFKQPLDRWTFVGIAVLTASGMLNWIRQRIRYEKMAMKE 286
>gi|13473035|ref|NP_104602.1| hypothetical protein mlr3516 [Mesorhizobium loti MAFF303099]
gi|14023783|dbj|BAB50388.1| mlr3516 [Mesorhizobium loti MAFF303099]
Length = 315
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 98/310 (31%), Gaps = 26/310 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L + +++ + + + V EV++ R + +LP + + G
Sbjct: 1 MKNRMVRGILSLCLGVLVFSLQDPLVKAVSSGYPVTEVMAIRSIVALPILIILVHADVGL 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++L G+L A I + + A+ YF+ P+ + L
Sbjct: 61 RAILSK------RFGLLTIRAFIQFTSYTVYYLAIAALPLADAVALYFMAPLFIMALAGP 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L ER++ + L+ + +++M A+ SA + +
Sbjct: 115 YLGERVSWRTLATVLIGLFGVIVMVRPGAGLFDWAALLSLGSAALYGFSQLMARKIGDTE 174
Query: 198 IEMCVLAIPALFYV-------------------VWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ Y+ + + +PD L + G
Sbjct: 175 SSTVMAFYQNGAYLVGAAVVAGTFHLAGINHAVHPSIEFLVRPWIWPTLPDFLKMAACGF 234
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ S + S G + A + V EYT L + + + I +++ A +
Sbjct: 235 VASAGMILLSQGYRLAPANRVATFEYTGILWSPLWGFLFFAEVPRSTTVIGAALIIGAGL 294
Query: 299 VYLLPTVINS 308
+ L S
Sbjct: 295 LALNTARRRS 304
>gi|94308951|ref|YP_582161.1| hypothetical protein Rmet_0006 [Cupriavidus metallidurans CH34]
gi|93352803|gb|ABF06892.1| Transmembrane transport protein [Cupriavidus metallidurans CH34]
Length = 309
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 83/286 (29%), Gaps = 12/286 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M G L++ A I G T + ++ + + + R +LP +
Sbjct: 2 SRRMHGYLYLTLAMITVGSTVVASKIVAAGLPPFTATALRFAIALPLFLVLMRVTRITWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+L + +LV + + I L PV+S + + L
Sbjct: 62 ILAP----REWGLLLVQAGAGSVGYTTLLILGLRHASATDAGVIIGTLPVVSAAIAIMVL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGS 192
ER ++A L +L + + + AV
Sbjct: 118 GERPRRAVLLAIALAAAGVLTIVFRNDAGSAHSLLGSLLIFGAVGCEGVFILLNKRIQTP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + V+ GF L + F ++ G
Sbjct: 178 IAPLALSTIMAVFGLAVAVIPAGFEMPWMHALSGNAVAAVAYYALIPTVGGFLLWYAGAA 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
R + + AP+ +V + +L + I + I G V++A+
Sbjct: 238 RVSGAEAALFTAVAPVSAVVLAAALLGEQIGQSQIIGIGCVLVAVF 283
>gi|317013017|gb|ADU83625.1| hypothetical protein HPLT_06175 [Helicobacter pylori Lithuania75]
Length = 298
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 106/302 (35%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + F +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLFVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSTLISACIGLVGVVLISDPSVENVGPVEILMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFIDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|308449076|ref|XP_003087847.1| hypothetical protein CRE_29394 [Caenorhabditis remanei]
gi|308252481|gb|EFO96433.1| hypothetical protein CRE_29394 [Caenorhabditis remanei]
Length = 308
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 84/300 (28%), Gaps = 14/300 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T +G++F A L+ ++ + +S L + + + +
Sbjct: 6 SSTQLGSIFALGAAFLFSTKAIFIKQAYALSPLVDSTVLMALRMASALPFFLLLCWFNRH 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ + L+ L F+ P ++V S K
Sbjct: 66 HNKNMTGKDWALLVAAGLMGYYLSSWLDFAGLMYISASLERIILFLYPTLTVIATSFIYK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------------WSAYCFARK 186
++LN I+A L +I+ L + +
Sbjct: 126 QKLNFRTILAIALSYGGTVIVMLQEQSTVPHEGNFWLGVSLVFASAVCFATYLLMTPRLI 185
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ +++ L + L+ +
Sbjct: 186 QKFGSWNYTGLALSIACFGTLTHFIIATPQPIQLLTQLPTQVIWYGIALGLLVTVLPTIL 245
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ I R + ++ P+L I+ +V +L + ++ ++ + +I +++ L
Sbjct: 246 VAQSISRLGAAQAAMIGSIGPILTIILAVALLGEYMNAIQWFGCLLNIIGVMMITLSKKK 305
>gi|303325919|ref|ZP_07356362.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
gi|302863835|gb|EFL86766.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
Length = 330
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 100/305 (32%), Gaps = 23/305 (7%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ L + A +W + + + L ++ L+ ++ R+L + L
Sbjct: 27 SRLVPHLALLTAMCVWSTSYVALRIALSGLTPLQAMAGRMLVASLVFAPL------WPRL 80
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+D ++ +L+ ++ F +AL + P+I + V L
Sbjct: 81 FRDLRRHGHLGALLLMGFCEPCCYFLFETHALRLTTASQAGMVVSLLPLIVAGVAWVALG 140
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVG 191
ER++ + L + ++ ++L + + +A+ +A+
Sbjct: 141 ERISGRVWLGFALAVGGVVWLSLAAAPADNAADPMLGNALEALAMLCAAFYTVIARRLSP 200
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-------NIPDTLFLIGYGLLNSFVF 244
I + LF+ + F + P L G + +
Sbjct: 201 LYNPMQITAAQSGLGMLFFCLLLLFLPETSRPISLGLELPAWAPWASVLYLGGCVTFGGY 260
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++++G+ R P+ ++ V +L + + + +V+ +++
Sbjct: 261 GLYNFGVNRLCAGQAAAYTNLIPVFTLLFGVSLLHEVFLPSQYLASVLVIAGVLLSQWRG 320
Query: 305 VINSG 309
++
Sbjct: 321 NTHAK 325
>gi|269838457|ref|YP_003320685.1| hypothetical protein Sthe_2448 [Sphaerobacter thermophilus DSM
20745]
gi|269787720|gb|ACZ39863.1| protein of unknown function DUF6 transmembrane [Sphaerobacter
thermophilus DSM 20745]
Length = 341
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/297 (10%), Positives = 88/297 (29%), Gaps = 18/297 (6%)
Query: 3 KGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVL 61
+ + + + +G + ++ ++ L + + WG + ++L +V EV+ R+
Sbjct: 15 RASEEPQAGRGGQRALSTRALLLVHLSLLFVAVSWGSNFVSIKYLLRRVDATEVLMIRLT 74
Query: 62 WSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS 121
+ ++ G + + + + ++ G Y + + S
Sbjct: 75 LASLCYAGFLLLSGRGFARFSRADWRK----AALMALLGVTINTGAVAYGVQMIPAAVAS 130
Query: 122 FSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL--------- 172
PV + + +ERL ++ + L++ + G
Sbjct: 131 LIVTGNPVFTALIARALGQERLTPRKLGGIAVAFTGFLVVLFYGGPEAQFSVRNALGILI 190
Query: 173 ----AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+A + + + + +P L E G
Sbjct: 191 TLLGPLAWAFYTVLSKPLLVRYEPVQFAGTVTILGTLPLLPLFATRPGVVREALRFGPAE 250
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
L + ++ G++ + + + Y P+ + + +L + I
Sbjct: 251 WLAVLTMVVFALVLAYALWYRGLRVLSPTQIAVYIYLVPVFGTLGAWLLLGEHITIY 307
>gi|225575170|ref|ZP_03783780.1| hypothetical protein RUMHYD_03259 [Blautia hydrogenotrophica DSM
10507]
gi|225037637|gb|EEG47883.1| hypothetical protein RUMHYD_03259 [Blautia hydrogenotrophica DSM
10507]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/282 (10%), Positives = 73/282 (25%), Gaps = 6/282 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF-SGGLSLLKDTL 85
+ +WG + + + V R L + I + S K
Sbjct: 10 FLLLLTAFIWGTSFVAQSVGTDYVQPFTFNGIRSLIGSLVLLPCIAFLDRKTSSPPKSPK 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L F + + T F VI G K+
Sbjct: 70 NSKDLILGGTLCGILLFAAANFQQFGIQYTTVGKTGFITACYIVIIPIFGLFLKKKCTPF 129
Query: 146 LQI----IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + L L + +L + I ++ + G +
Sbjct: 130 IWLSVLLALVGLYFLCITTDSLSINFGDFLVFICAILFSFHILVIDHFSPLTNGIKLSCI 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + ++ L + L + + G K + +
Sbjct: 190 QFFVCGILSIICMFLFEQPDISLILSAWAPLMYAGVLSCGVAYTLQIVGQKDMNPTVAAL 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + +++ +L + + ++ A+++ LP
Sbjct: 250 ILSLESCISVLAGWILLGEALSHREIWGCILMFTAIILAQLP 291
>gi|147668868|ref|YP_001213686.1| hypothetical protein DehaBAV1_0219 [Dehalococcoides sp. BAV1]
gi|146269816|gb|ABQ16808.1| protein of unknown function DUF6, transmembrane [Dehalococcoides
sp. BAV1]
Length = 300
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 84/290 (28%), Gaps = 12/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++T+ L + + S R+L + + L
Sbjct: 9 YLLLLLGVFGIAAASVFTR-LADAPPVIIASLRMLAATLLLLPFAA----RPVYLAIKRL 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +++ + ++ + F++ +L + PV+ + + +E+LN
Sbjct: 64 SRRNLLLIILAGFLVGMDQFFWVSSLEYTSIASSVILVTSHPVLVAIMSYIMWREQLNPK 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSEGFFIE 199
I L ++++ L + + + S +
Sbjct: 124 AIFGVLAAFGGMVLINLATTQVGEQAFLGNMLAMAATIPTTGYLIIGRQMRNSIDFLPYI 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A F + SG + + + + ++ V
Sbjct: 184 TLLYGSAAFFLLAGAFISGDSFGGYPGTTYLMIFLLAVVSQLVGHSSLNMALRLVPALVV 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ I+ L + + + +V+ +++ +L
Sbjct: 244 SVAILGEPVGAIILGYLFLGEGLTFNEFLGGMLVLAGILIVMLNQPRTKK 293
>gi|83952857|ref|ZP_00961587.1| membrane protein, putative [Roseovarius nubinhibens ISM]
gi|83835992|gb|EAP75291.1| membrane protein, putative [Roseovarius nubinhibens ISM]
Length = 302
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 88/288 (30%), Gaps = 10/288 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G L + A + ++L L+V++ R +
Sbjct: 21 LGILLMLVAAVFATSLSASAKWLLTELAWPALQVVALRYAVHFAMACAIFL------PKQ 74
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ A G L+ + +L + F AL LT+ F P++ L L E
Sbjct: 75 GVAVFRANAPGRLLLRSLVLILATLFNFLALQHLPLTLTTVILFAGPILITVLSVPMLGE 134
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI-EM 200
R+ +++A L+ +L++ G+ + S + I G
Sbjct: 135 RIGAHRLVAVLVGFCGVLVVIQPGGVGFDPAVLYSVGSMGFASLYYILTRMLAGVDSNAS 194
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L L VV+ S G + + ++ G+ + + A+ S +
Sbjct: 195 IQLWSSGLASVVFLPLSLGTWVWPESGTALAVVLFMGVCGGLSHIASTGAHQLARASMLA 254
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y + + + + + I++ + + S
Sbjct: 255 PFTYAQIVTASAAGYLLFGERPGAATLVGCAIIIGSGLYLWWRETRLS 302
>gi|325979024|ref|YP_004288740.1| integral membrane protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178952|emb|CBZ48996.1| integral membrane protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 302
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 99/300 (33%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ GT+ V A I WGI+ + Q+L +++ + S R++ S + + S
Sbjct: 2 NKNLKGTIMVLMAGIAWGISGISGQYLMAHGMNINLLTSVRLIVSGLLLTAMAMI-SQPQ 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + G+ VF+ L ++ ++ A+ + +V P+I + S+
Sbjct: 61 HFFRAIKQPKVLGGIAVFALIGLLMNQYAYLMAIHYTNAGTATVLQYVAPIIILAYVSLK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIPVG 191
K+ + A L IL I+ H + + + +
Sbjct: 121 NKQLPTLSEFFAILFAILGTFIIATHGHFDGLAMTPKGFFWGLFSAVTYSFYIVLPAKLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G F + + + S L + + F + F G
Sbjct: 181 REFGSFTVIGLGMLMGGVVFPIVTRSWQYPLVLTSGNWLALFGIIIIGTVFAYTFFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + SV I+ + + + +++A++ L +I K
Sbjct: 241 TIIGAVKGSLLAAIEPVSSVFFSVTIMHEIFYPMDFVGMIFIIVAVLTVSLRDLIAVRKQ 300
>gi|255691153|ref|ZP_05414828.1| putative transmembrane permease [Bacteroides finegoldii DSM 17565]
gi|260623248|gb|EEX46119.1| putative transmembrane permease [Bacteroides finegoldii DSM 17565]
Length = 305
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 104/301 (34%), Gaps = 18/301 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G LF A ++WG+ + L++ S + V + R++ + + ++
Sbjct: 2 KNNKNLQGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWILSIFCKQ- 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + + S L + G FI+ L S P++++ + ++
Sbjct: 61 -----EHVNHQDMLKIFFASLFALVFNQGVFIFGLSMTSPIDASIVTTTLPIVTMIVAAI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARK 186
+LKE + + +++ + + LI+ + S G L +A +
Sbjct: 116 YLKEPITNKKVLGIFVGAMGALILIMSSQAGNNGNGSLIGDLLCLVAQISFSIYLTVFKG 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
S+ M V A ++ S + + I L + +
Sbjct: 176 LSQQYSAVTINKWMFVYASMCYIPFSYHDISIIQWGAVSTIAIIEVLYVVLGGSFLAYLC 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
K + + V + Y P++ ++++ + + + +V + + +
Sbjct: 236 IMTAQKLLRPTVVSMYNYMQPIVATIAAIIMGIGSFGWQKGLAIALVFLGVYIVTQSKSR 295
Query: 307 N 307
Sbjct: 296 A 296
>gi|217034063|ref|ZP_03439484.1| hypothetical protein HP9810_893g10 [Helicobacter pylori 98-10]
gi|216943458|gb|EEC22912.1| hypothetical protein HP9810_893g10 [Helicobacter pylori 98-10]
Length = 298
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 102/302 (33%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFIKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|210135393|ref|YP_002301832.1| membrane transport protein [Helicobacter pylori P12]
gi|210133361|gb|ACJ08352.1| membrane transport protein [Helicobacter pylori P12]
Length = 298
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 104/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|182416713|ref|ZP_02948113.1| integral membrane protein DUF6 domain protein [Clostridium
butyricum 5521]
gi|237668268|ref|ZP_04528252.1| integral membrane protein DUF6 domain protein [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182379438|gb|EDT76932.1| integral membrane protein DUF6 domain protein [Clostridium
butyricum 5521]
gi|237656616|gb|EEP54172.1| integral membrane protein DUF6 domain protein [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 287
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 89/280 (31%), Gaps = 7/280 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ F+ + I + L ++ VS+ + + + ++
Sbjct: 4 SKRLKAICFMILSSIFFTTMNLLSKLASDVSLYQKAFISNSIAFLIIAIVML------KN 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L + Y L + + P +V G +FLK
Sbjct: 58 NISFFGRKENRKHLNIRGLCGTLSLACLYYTLDHMILSDATMLSKLGPSFAVLFGCIFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ +N Q++ +L + +++ ++ I + +A T+ +
Sbjct: 118 DNINKKQVLFLILTLAGSILIIKPSFSFSIIPSLIGLCGAACAGTAFTMIRLIGDKENKF 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + F N +F+I G +F + K A S++
Sbjct: 178 TIIFYNIFFACIASLPFIFINISNFKNKESVVFMILAGFCIAFGQISLTLAYKNAPASSI 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +Y ++ + + + K+ D + + + I+ + +V
Sbjct: 238 AMYDYVGLIVSALYGLVLFKEIPDILSILGYIIISGSALV 277
>gi|154245850|ref|YP_001416808.1| hypothetical protein Xaut_1906 [Xanthobacter autotrophicus Py2]
gi|154159935|gb|ABS67151.1| protein of unknown function DUF6 transmembrane [Xanthobacter
autotrophicus Py2]
Length = 304
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 82/286 (28%), Gaps = 8/286 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A + +T ++L ++V V+ R +
Sbjct: 24 GIALMCVAVASFAVTDTTAKWLSGHINVFVVVWARYVIHFACSLVVF------NPWTVPG 77
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L + + + + +L + AL Q T F P L ER+
Sbjct: 78 LLKTRRPLLQIGRSAMLFLTTALNFTALQVLQLDQTVSIMFSVPFFVALFAGPLLGERVG 137
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A L+ +L++ + AI +A +A I L
Sbjct: 138 VRRWCAILVGFAGILLVVRPGAGGIHPAAILSLGAAATYALYAITTRMLAKSDSSATTLF 197
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+L V + P + + G++ + RA +T+
Sbjct: 198 YSSLVGSVAASLPLPFVWETPRDPLVIGAMLELGMVAGVGHFLLILAHARAPAATLAPYI 257
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
YT + MI + Q G+V+ + L+ +
Sbjct: 258 YTQIIAMIALGWLVFGQVPSAWTLTGAGVVIASGAYLLVMESRSRR 303
>gi|260770018|ref|ZP_05878951.1| putative membrane protein [Vibrio furnissii CIP 102972]
gi|260615356|gb|EEX40542.1| putative membrane protein [Vibrio furnissii CIP 102972]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 87/293 (29%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++WG + + + + +R ++ + + + + +
Sbjct: 3 YLLPLFTVLIWGGNSIVNKLAASTIEPSAMSFYRWFLAMLILTPFCL----PAVIRQRHI 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT S + P++SVF+ L +R++
Sbjct: 59 IKPYLAKLAFLALLGMVLNQSLGYYAGLTTTASNMSLITSLVPLMSVFISVPLLNKRISG 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L I+ ++ + L M + + + Y +
Sbjct: 119 LSIVGGVISLSGLAFMLGQGDVLFFLNQDVTQGDGLMVLAALVYAIYCVLLKRWKMPLSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L ++ + +H L + ++ I
Sbjct: 179 WTLIYLQGVCAVIMLVPLWLSSDHLLPTEGSLPLIAYAGVAASLLAPWMWIKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + P++ + + +L + I + +VV +++ L K
Sbjct: 239 STAMFMNLLPVVAVSLAATLLGEQIHVYHVLGGVMVVSGVILSQLKVRRRVIK 291
>gi|258507583|ref|YP_003170334.1| carboxylate/amino acid/amine transporter [Lactobacillus rhamnosus
GG]
gi|257147510|emb|CAR86483.1| Carboxylate/amino acid/amine transporter [Lactobacillus rhamnosus
GG]
Length = 316
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/305 (11%), Positives = 88/305 (28%), Gaps = 10/305 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N + + G +F I WG + ++TQ L V L ++ R+ ++ +
Sbjct: 2 NQNDQKLKGVIFAVVGAIFWGASGIFTQMLFTDAGVQPLWLVGIRLFFAGL-LLVIWSSL 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L A+ +++F+ + + A+ + F+ PV +
Sbjct: 61 KDLRQLGTIWKNRHDAMLLILFAFLGMVPSQLTYFLAISAGNAATATILQFLGPVFILLY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ + ++ L ++ ++ + LSLA A +
Sbjct: 121 VAFATRQMPRRIDFVSITLALIGTYLLVTRGRLTSLSLAPAAVFWGIMAGVSQALYTLLP 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY------GLLNSFVFCIFS 248
+ + ++ + L P + +
Sbjct: 181 RTLLAKYDARAVTGWSMLLGSLPFLPQYVLRRNPVLTLPNLGAIAFVVIFGTMLAYLLVL 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ G++ PL +V L + ++V+ ++ LP
Sbjct: 241 GSLHYISPVATGMLSAFEPLTATTLAVTRLHIAFGPAEWLGGFLIVLNTLLQALPFNKLQ 300
Query: 309 GKNKT 313
+
Sbjct: 301 HVQRR 305
>gi|315231436|ref|YP_004071872.1| permease [Thermococcus barophilus MP]
gi|315184464|gb|ADT84649.1| permease [Thermococcus barophilus MP]
Length = 286
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 105/284 (36%), Gaps = 6/284 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + + ++WG ++ +F ++ L + RV + K +
Sbjct: 5 GRIKITVSMLIWGSVGIFARF-TNLNGLGIAFFRVALGALILALLFSIKDKSW-FQKVSG 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ G ++ LA++W F A L Y+ PV++ + + FLKE+++
Sbjct: 63 ATKQKFGWMILLGIALALNWVFLFTAFLYTSIARAVLIYYSAPVLATLISAKFLKEKISK 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM----C 201
QI+ L+ L L+I+ + + A+ A + + F E+
Sbjct: 123 FQILLILMAFLGLMIIMSEQKMNFKNRDFVGAVFAFIAAVFYAMIPNLGRFLKEVKSDIL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ V+ F F G I I + F ++ G+K K++ V +
Sbjct: 183 TFVQLFIASVILIPFVLYGKIFAGKINWFAVGILVAVHTVFALFLYMDGLKNVKVNEVAL 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y PL +V + + + I +++ A ++ L
Sbjct: 243 LSYLDPLSAVVYAFLVFGEVPALRTVIGGVLILSASLLDTLKRR 286
>gi|319939801|ref|ZP_08014157.1| membrane protein [Streptococcus anginosus 1_2_62CV]
gi|319811014|gb|EFW07329.1| membrane protein [Streptococcus anginosus 1_2_62CV]
Length = 303
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 99/300 (33%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
GT+ A I WG++ Q+L VL + + R+L + + +V +
Sbjct: 2 SKIAKGTILTLVAGIAWGLSGTSGQYLMAHGFPVLVLTNVRLLIAGALLVLYMVLANR-R 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L++ + + +F+ L ++ ++ ++ + +V PV + +
Sbjct: 61 KLIEMIKDRKAIMSLALFALLGLLLNQFAYLKSIYESNAGTATVLQYVCPVGILAYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ ++++ +L ++ H L + ++ + I +
Sbjct: 121 DRVAPTVTEVLSMILAAGGTFLIATHGQLNQLSVTPAGLFWGLFAAFTYALYILIPIQLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + V + A ++ H+ L + + +F G
Sbjct: 181 KTWGSIPVIGVGMMFAGLVLIPFSGILHFHWRLSMEVYLALAGIILVGTILAYTLFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+ + V +++ A+ + + +I +
Sbjct: 241 SLVGPVKSSLLAAVEPISAVFFAFLIMHEQFYLVDFAGMFMILSAVFLISIKDLILEKRK 300
>gi|315182542|gb|ADT89455.1| permease of the drug/metabolite transporter [Vibrio furnissii NCTC
11218]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 85/293 (29%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++WG + + + + +R ++ + + +
Sbjct: 3 YLLPLFTVLIWGGNSIVNKLAASTIEPSAMSFYRWFLAMLILTPFCLPAVIHQR----HI 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT S + P++SVF+ L +R++
Sbjct: 59 IKPYLAKLAFLALLGMVLNQSLGYYAGLTTTASNMSLITSLVPLMSVFISVPLLNKRISG 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L I+ ++ + L M + + + Y +
Sbjct: 119 LSIVGGVISLSGLAFMLGQGDVLFFLNQDVTQGDGLMVLAALVYAIYCVLLKRWKMPLSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L ++ + +H L + ++ I
Sbjct: 179 WTLIYLQGVCAVIMLVPLWLTSDHLLPTEGSLPLIAYAGVAASLLAPWMWIKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + P++ + + +L + I + +VV +++ L K
Sbjct: 239 STAMFMNLLPVVAVSLAATLLGEQIHVYHVLGGVMVVSGVILSQLKVRRRVIK 291
>gi|294776581|ref|ZP_06742051.1| putative membrane protein [Bacteroides vulgatus PC510]
gi|294449569|gb|EFG18099.1| putative membrane protein [Bacteroides vulgatus PC510]
Length = 295
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 84/294 (28%), Gaps = 8/294 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ P ++ L S EV+++R + +
Sbjct: 1 MNRIKGILYAAVSSATFGLAPFFSISLLAIGYSSFEVLTYRWGVATVVLLVFAFLTKCDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + +L + T ++ + A + V ++VF
Sbjct: 61 HIGYKDFKTIFGLSLLR-ALTSFSLVIAYQNIASGVASIIHFMYPLAVAVTMAVFFREKK 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS----- 193
+ + +LS + + G ++ L A +
Sbjct: 120 SIVTFAAIVLSLVGASLLSSGNIEYNGGNRMMGLIAACISVFSYAGYIIGIRKTRAVEVN 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ F + + G I + +K
Sbjct: 180 STVLTCYVMGLGALFFLLGGLFYDEGVRLETNVITWLYIGGLALPATAISNITLVKAVKL 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + ++ PL ++ VF+ K+ T + +VVI++ + L
Sbjct: 240 AGPTLTSLLGALEPLTAVLVGVFVFKELFTTYSALDIILVVISVSLVLFQQKRT 293
>gi|260426658|ref|ZP_05780637.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260421150|gb|EEX14401.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 288
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 89/290 (30%), Gaps = 5/290 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A T +G + +++ + ++ L + +V V+ R + V +GG
Sbjct: 2 AQQNTSLGIWLMVFTTLVFALQDGISRHLSAEYNVYMVVMIRYWFFAAFVMAVAGRQAGG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L T + + +F +L + A + + + P++ L
Sbjct: 62 LRAAAATSQPL----LQIFRGVLLVAEIWVMVTAFVLLGLTESHAVFTAYPLLVAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ + A + + ++I+ SG A+ +A FA +
Sbjct: 118 ILGEKVGWRRWTAIGVGFIGVIIILQPSGGVFSPYAVVPLVAALMFALYGLLTRYVARKD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + G + D ++ + + + A+ S
Sbjct: 178 SAATSFFWTGISGGITATVVGAWFWEPMTGADWGWMGLLCITGALGHFTLIKCYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V Y + + + + + I I+V A + L +
Sbjct: 238 AVQPFAYLQLVFAAALGMTVFGETLRPNVAIGACIIVAAGLFTLWRARVR 287
>gi|300773210|ref|ZP_07083079.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300759381|gb|EFK56208.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 297
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 105/291 (36%), Gaps = 16/291 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A IL G T ++ + + V+ ++ +RVL+S ++ + F +
Sbjct: 13 YLVLHVAVILAGFTGIFGKLIT-VNEGLLVWYRVLFSAIILWMILKLFHVSRQITTKEKF 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + +HW FF ++ + Y +T + + + + N
Sbjct: 72 NIAKI------GMFITLHWVFFYASIKYSNISVGVVCYCLTSFFTAVFDPLINRRKFNVN 125
Query: 147 QIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+++ ++L + + ++ L G+ ++S A A ++ + ++
Sbjct: 126 ELLLSVLTLAGIALIFHFDSSYQLGIGLGIISSAFAALYTLFNERIVKNYDSRLINYYQM 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + + +I ++ +F+ +K+ TV
Sbjct: 186 IGGTIGLGILMPFYLYAFPVQTVLPDLKDIGYLVILASFCTVGLYILFAESLKKIPAFTV 245
Query: 260 GIMEYTAPLLMIVSSVFILKQP--IDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P+ I+ + + ++ I +V+ ++V+ + ++ S
Sbjct: 246 NLSFNLEPVYAIILAFLFFNESKQLNLFFYIGLLLVMTSVVLQTIVSLKRS 296
>gi|228997947|ref|ZP_04157549.1| Transporter, EamA [Bacillus mycoides Rock3-17]
gi|228761822|gb|EEM10766.1| Transporter, EamA [Bacillus mycoides Rock3-17]
Length = 320
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 94/300 (31%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + + L
Sbjct: 17 RMKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFFMERSL 76
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +LV ++ F+ ++ S ++P+ + L +
Sbjct: 77 RIERKDWLR-----LLVVGIVGTTLYQTLFMLSVKYTSATNASLLIAMSPIFTGILAVLH 131
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT----------WSAYCFARKTI 188
+ER + I +LL ++ L + A +
Sbjct: 132 KQERFSMKIQIGSLLSFSGAALVLLTGHTNQSTYEYAWFGNLIGLVAAIAWGWYPILAQP 191
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIF 247
+ + I + VV+ F+ + + F ++
Sbjct: 192 LITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLAWPTDTLSWGSLGYSILFATVFGLAMW 251
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+T++ + ++ I + V V
Sbjct: 252 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGERINTMQLLGGLVIFIGLYVVKKGAVKK 311
>gi|206563296|ref|YP_002234059.1| hypothetical protein BCAM1444 [Burkholderia cenocepacia J2315]
gi|198039336|emb|CAR55301.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 310
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 84/284 (29%), Gaps = 20/284 (7%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ WG T + + L + R + + GGL L +
Sbjct: 25 LVALFWGGTFIAGRILAATMSATSAATGRFAIAALLLVVLTWQVEGGLPTLSG----RQI 80
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
V AT + ++ F AL T+ + PV + L SV ++ERL+ +
Sbjct: 81 VTTFGLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSVVVRERLSLSRWAG 140
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-------------- 196
+ + L++ + + T+ A + +
Sbjct: 141 IAVALCGALVVISRGDWLRVLTDLGNTFGAGERFMLCAVLSWAAYTVIGRRALDGLSPLA 200
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L + L L + F +S GI+
Sbjct: 201 ATTYAALWGLALLLVTHLFDATATGGTPLTWQAVASMLYLGAVGTVIAFVWYSQGIRLLG 260
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ SV +L +P+ +V+ + +
Sbjct: 261 PARAAVFTNLVPVFGVLLSVVLLGEPLSPSMLAGGALVIAGVAL 304
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 31/131 (23%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + F I + AI AL VV G L
Sbjct: 25 LVALFWGGTFIAGRILAATMSATSAATGRFAIAALLLVVLTWQVEGGLPTLSGRQIVTTF 84
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F + R + P+ V ++++ + R +
Sbjct: 85 GLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSVVVRERLSLSRWAGIAVA 144
Query: 294 VIAMVVYLLPT 304
+ +V +
Sbjct: 145 LCGALVVISRG 155
>gi|241518355|ref|YP_002978983.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240862768|gb|ACS60432.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 348
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 26/288 (9%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG T + T+ +E V L R + + + V
Sbjct: 16 CMIWGSTWIGTKAGIEAVPPLLFAGTRFTAAGILLLLYTLAKGETARFKVQDGFRFAVVS 75
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L+ + + WG T S + V ++ L +E+L+ +I+A +
Sbjct: 76 ILMITLCYGPLFWGMQYIDSGTAAVLEMSLTPIALLVFALLL----NEEKLDGRRILAIV 131
Query: 153 LIILSLLIMTLHSGIPLLS---------------------LAIAVTWSAYCFARKTIPVG 191
L + L+++ + + +T P
Sbjct: 132 LGVCGLVVLFWPASAQVSPPAPEAFPGASLWGGLAVASAAFTYGYGSVLARPLLRTYPAL 191
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + G G + + + + F +
Sbjct: 192 FVSGVTTLVGGIVLLIAALAFEPGAVSALAGDWGTVAWLGWFFLVIFGSLIGYTTFMRLL 251
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ S G + +P++ +V + + I + I +++ +
Sbjct: 252 RDIGASRAGSYAFVSPVIAVVLGAAVFAEQITAMDVIGIVVMLSGAYL 299
>gi|167907550|ref|ZP_02494755.1| hypothetical protein BpseN_35294 [Burkholderia pseudomallei NCTC
13177]
Length = 306
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 67/279 (24%), Gaps = 6/279 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L + R L + + + ++ +
Sbjct: 21 IWGSAFVAQRLSLAVIGPFLFTGLRFLLGAAVLVPLLCANGAARAHCATLARDRTRLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +LAV L + F + V+ +G F + ALL
Sbjct: 81 LALGGLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPVIGVFFRHRT-GIGTWLGALLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A+ V + + +
Sbjct: 140 AIGLYFLSVDAHFSMLYGDWFQLAGAIVIAFHVIAVGHLVRRHDPLVLSFMQFVVCGALC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ L G L + + + A + ++ +
Sbjct: 200 LALGLAIEPLDRATLTRALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ L + + +++ ++V L
Sbjct: 260 AIAGWAALGETLSLRALAGCALMIAGLLVCQLLPGHARR 298
>gi|163789391|ref|ZP_02183830.1| hypothetical protein CAT7_01447 [Carnobacterium sp. AT7]
gi|159875245|gb|EDP69310.1| hypothetical protein CAT7_01447 [Carnobacterium sp. AT7]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 98/279 (35%), Gaps = 14/279 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
V A +L+G L + +E ++ E+ +R L + F ++ +S +
Sbjct: 8 VVIAMLLFGSIGLMVKNIE-LTSSEIALYRGLLGSLFLLFFLLLKKKSVSRIALKSNAKV 66
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V S + ++W A + SY+ PVI + + FLKE+L + I
Sbjct: 67 LVI----SGAAIGLNWILLFEAYNYTTIANATLSYYFAPVIVMVISPFFLKEKLLPNKAI 122
Query: 150 AALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L+ +L + ++ + + V M
Sbjct: 123 SILIAMLGMFLVVGIGTQTSGEYTHSVGILYGLGAAVLYASVMMLNKLVKDMSSLESTMI 182
Query: 202 VLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + ++ + + G + L+ + + ++ ++ K TV
Sbjct: 183 QLMVASVTLAPYVLVTQGFDLVEISVTSIPYLLVLGIVHTGLAYVLYFSAMQYLKSQTVA 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ Y P+ +V S L + ++ V+ +++ + +
Sbjct: 243 LLSYIDPVAAVVMSALFLGENMNGVQIFGGMLILSSTFI 281
>gi|83953172|ref|ZP_00961894.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83842140|gb|EAP81308.1| membrane protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 311
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 87/289 (30%), Gaps = 6/289 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ L ++W + + S L +S R L S + L +
Sbjct: 25 IRAILMGLAFAVMWSSAFTSARIIVADASPLMALSARYLISGLIGVGVALALGQTWRLTR 84
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ G+L + + + + + + + + ++ +L +
Sbjct: 85 AQWRATIIFGVLQNA--VYLGMNFVAMQTVQASLAAIIASTMPLLVGLATWLFLGEKLKP 142
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---FFIE 199
L +IA ++ + ++ + G+ L L + A + G++ G +
Sbjct: 143 LGIAGLIAGVIGVAIIMGARISGGVDLTGLLLCGVGVVALSAATLLVRGATSGGNFLMVV 202
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + + H FL + ++ + + R +
Sbjct: 203 GLQMLVGCVALSIATLLFETPHISPSWPLALAFLYTCLVPGLLATVVWFWLVNRIGATRA 262
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P + + +L +P+ I ++ + ++ + +
Sbjct: 263 ATFHFLNPFFGVAIAWLLLGEPLGVQDIIGVAVIALGILAVQVSRQRRA 311
>gi|330809862|ref|YP_004354324.1| hypothetical protein PSEBR_a3016 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377970|gb|AEA69320.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 297
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 98/293 (33%), Gaps = 11/293 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G+L + A ++ G + + + VL+V+ R ++ + F L+
Sbjct: 6 RRGSLEMTAAMLISGTIGWFV-LVSGLPVLDVVFWRCVFGAVTLLLICAGFG----FLRP 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + V S + +W + + + Y V P + V L ++FL E++
Sbjct: 61 GILTRTTFLLAVLSGVAIVGNWVLLFASYSRASIAIGTAVYNVQPFMLVGLAALFLGEKI 120
Query: 144 NHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ + L +L + G L +A +A + + G
Sbjct: 121 TAQKLFWLAVSFLGMLAIVSAHGEQGQGGGDYLLGIALALGAALLYAIAALIIKRLTGTP 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + ++ ++ LI + ++ + I+R +
Sbjct: 181 PHLIALIQVSTGVLLLAPWANFSALPQHPQAWVSLLILGVVHTGVMYVLLYSAIQRLPTA 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G + + P+ I F ++ ++ + +++A I S +
Sbjct: 241 LTGALSFIYPIAAIFVDWFAFGHRLEPLQWLGVAAILLAAAGMQQGWGIKSRR 293
>gi|284030777|ref|YP_003380708.1| hypothetical protein Kfla_2844 [Kribbella flavida DSM 17836]
gi|283810070|gb|ADB31909.1| protein of unknown function DUF6 transmembrane [Kribbella flavida
DSM 17836]
Length = 307
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 79/290 (27%), Gaps = 11/290 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + WG T T+ L ++ V + ++ R L + +
Sbjct: 16 NHPRIAVIALLSVAAAWGSTFFLTKDLLTRMDVADYLALRFLIAAAALILV--------H 67
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ G V V L ++ F + V + L +V L
Sbjct: 68 PPAIARLSRLDRGRGVALGITYGVAQLVQTEGLRHTSASVSGFVTGMYVVFTPLLAAVIL 127
Query: 140 KERLNHLQIIAALLIILSLLIMTL--HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ +A L + L +++L S L +A + F
Sbjct: 128 RHKIGRWAWVAVALATVGLGVLSLRDFSLGTGELLTLASAGLYALHIIGLGAWSTPSNAF 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + GG G + + + + ++ +
Sbjct: 188 GLSALQMVVITVVCAVGAIPGGFALPSGGGDWVRVVYMALVAGALALIVQTWAQAHLTPT 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I P+ +V + + I +VV AM + L
Sbjct: 248 RAAIAMTMEPVFASGFAVLFGSESVTARMLIGGALVVSAMYLVELAPRRK 297
>gi|255029662|ref|ZP_05301613.1| hypothetical protein LmonL_12355 [Listeria monocytogenes LO28]
Length = 293
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 91/282 (32%), Gaps = 17/282 (6%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
+ + + S R+ + V + K + +
Sbjct: 5 LVSYFPTVTMTSFRIFTAAITVIIILFITKKLRLPTKQEFGLILLASIFNIVIHHFFLSN 64
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
G L G P++ +FL+ER+ + + L I + ++ L +
Sbjct: 65 G-----LKLTTGTNAGLILGSAPIVVAIFSVIFLRERIGAWRALGFLAGIFGVSLVVLSN 119
Query: 166 GIPLLSLAI------------AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
G + +++ A ++ ++ G G+ + + + + L +
Sbjct: 120 GTGISGISLGDIDIFIAMASQAFSFIIIKKLAGSMDTGLMTGYMLFLGSVMLFGLSRFME 179
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
LF++ + +F +++Y + + S I PL ++
Sbjct: 180 PDGMSELVTVHSWKLWLLFVVSAVVATAFGNFVYNYAVGKIGPSRSAIFMNFNPLFSLIG 239
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++ L + I + + FG ++I +++ + + K K
Sbjct: 240 ALLFLGEAIKIPQLVGFGFIIIGVLLGSGALMDLIYERKKTK 281
>gi|269798341|ref|YP_003312241.1| hypothetical protein Vpar_1281 [Veillonella parvula DSM 2008]
gi|294792206|ref|ZP_06757354.1| transporter [Veillonella sp. 6_1_27]
gi|269094970|gb|ACZ24961.1| protein of unknown function DUF6 transmembrane [Veillonella parvula
DSM 2008]
gi|294457436|gb|EFG25798.1| transporter [Veillonella sp. 6_1_27]
Length = 295
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/281 (10%), Positives = 83/281 (29%), Gaps = 12/281 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G ++ + +L+ ++ + L + E+ R + V +
Sbjct: 2 AKKGLIYALLSALLFSTMNVFVKLLGTNIPPGEIAFARGFFGTVAVLIIMYVKGIRF--- 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + G+LV AL+ + + + T + ++FLKE
Sbjct: 59 -----SKEDRGLLVMRGLYGGFGMVCNFIALVHIKLSDATILFQTTGIFVFIFSALFLKE 113
Query: 142 RLNHL--QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + + +LI + +++ +A+ +A A T S+
Sbjct: 114 SIPKGAGKWLGVILIAVLVMVNPFSYESFSWYALVAILGAALAAAAYTTIRTISKRGKHS 173
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + G + + D L + G ++ +
Sbjct: 174 NFEIMAYFMITGMIAGLVTTDKLVMPQGTDWLIIFAIGGISVVAQFFLTGAFVTTNAVVA 233
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRT-IVFGIVVIAMVV 299
++Y + I + + + + ++++
Sbjct: 234 QFLQYVGVFISSFYGFLIFGESLSIATVGAGIAMFISSVML 274
>gi|229815954|ref|ZP_04446276.1| hypothetical protein COLINT_03008 [Collinsella intestinalis DSM
13280]
gi|229808413|gb|EEP44193.1| hypothetical protein COLINT_03008 [Collinsella intestinalis DSM
13280]
Length = 406
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/278 (10%), Positives = 81/278 (29%), Gaps = 13/278 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WG + L + L+ V +++ R L S +F
Sbjct: 121 LMLVAMALIWGYSFLTMKTVLDTVPTFMLLACRFLLSAVIMFTI-------FRKRIKAHF 173
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + +G V ++ + L+ +F ++ F+ + KER+
Sbjct: 174 NREYLGFGVLMGCVIWSAYAAQTLGLVDTTPGKNAFLTGTYCILVPFIALILFKERVTKW 233
Query: 147 QIIAALLIILSLLI-----MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I +ALL ++ + ++ G + + M
Sbjct: 234 HIASALLCLVGVGFVALDNFSIQMGDLMTLVGAVFFAVDMAVVGHIGRTRDVSVLTSWMF 293
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + + + + +T +
Sbjct: 294 LFVGLFSLAATTAFEPRVPAGQWTPEIVGQLVFLAVVCTTIGLLLQNQALSHVPPATGSL 353
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ SV + + + F ++ +++V+
Sbjct: 354 LLSLESPSGVLFSVLMAGEVLTGKLIFGFVLIFLSIVL 391
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 14/138 (10%), Positives = 36/138 (26%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
PL + V + + M + L V+ N
Sbjct: 116 PLFWKLMLVAMALIWGYSFLTMKTVLDTVPTFMLLACRFLLSAVIMFTIFRKRIKAHFNR 175
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
F + G + + + G+ + T +L+ ++ + K+ +
Sbjct: 176 EYLGFGVLMGCVIWSAYAAQTLGLVDTTPGKNAFLTGTYCILVPFIALILFKERVTKWHI 235
Query: 288 IVFGIVVIAMVVYLLPTV 305
+ ++ + L
Sbjct: 236 ASALLCLVGVGFVALDNF 253
>gi|152993504|ref|YP_001359225.1| hypothetical protein SUN_1921 [Sulfurovum sp. NBC37-1]
gi|151425365|dbj|BAF72868.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 300
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 96/294 (32%), Gaps = 24/294 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G LF+ A + + + + + Q+ +EV R ++ + V +I
Sbjct: 10 RGILFMLLASLSFAFMGGFAKVVSQILPPVEVTFFRNIFGVVLVGISIY--------KVP 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +L+F ++ + Y + +P+ +FLKE+L
Sbjct: 62 LKQTGGKFLLLIFRGSMGFAALLAYFYIMAHIPLGEAVTYNKTSPIFVAIFAYIFLKEKL 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA---------------YCFARKTI 188
+IA ++ + ++++ G I +S Y R +
Sbjct: 122 PPPAMIAIVIGFVGIVLIAQPQGGSFDKYDILGIFSGIGAALAYTSIRELRRYYDTRAIV 181
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G + ++ I V F + L++ G+ + + +
Sbjct: 182 MSFMGVGTIAPLFLMLITPYVSVPEGFDWMFAKFVMPEGIAWLYVTAVGIFATMSQLLMT 241
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ K VG + Y+ + ++ + D + +V+++ ++ L
Sbjct: 242 KAYELTKAGIVGTISYSNIVFALIIGTLLGDPIPDFWTILGIILVIVSGLMVAL 295
>gi|332826529|gb|EGJ99358.1| hypothetical protein HMPREF9455_00391 [Dysgonomonas gadei ATCC
BAA-286]
Length = 314
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 92/294 (31%), Gaps = 4/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ GT++ A + +G PL +L E ++V V+ +R + + ++
Sbjct: 2 STKLKGTIYGVIAAVSYGTNPLGALYLYKEGLNVNSVLFYRFSLAAIILAGIMLVQKKSF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K L +G+L ++ + ++ A + + F +
Sbjct: 62 VVTKKELGILGVLGILFATSALSLFTSFHYMDAGVASTILFVYPVMVAVIMALFFKEKLS 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ L+ L + + ++ + S I +L + ++ A +
Sbjct: 122 MVTILSILLALGGIALLYKGEGGSTLSSIGVLLVMLSSLTYAVYIIVVNKSTLMMSAVKL 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFF--LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
VL L VV + F H + + +
Sbjct: 182 TFYVLVFCMLVIVVHSFFETNNHLQLLTTPTMWIWTAMLALVPTVISLITMVKAVHAIGS 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ IM PL ++ + I + + +++ A+++ + I K
Sbjct: 242 TPTAIMGALEPLTAVIIGIAIFGEVLTIRLATGIVLILSAVIIIIAGKSITPLK 295
>gi|222445250|ref|ZP_03607765.1| hypothetical protein METSMIALI_00878 [Methanobrevibacter smithii
DSM 2375]
gi|261350191|ref|ZP_05975608.1| putative integral membrane protein DUF6 [Methanobrevibacter smithii
DSM 2374]
gi|222434815|gb|EEE41980.1| hypothetical protein METSMIALI_00878 [Methanobrevibacter smithii
DSM 2375]
gi|288860977|gb|EFC93275.1| putative integral membrane protein DUF6 [Methanobrevibacter smithii
DSM 2374]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 83/283 (29%), Gaps = 9/283 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
L A I++G + ++ + L + ++ R + +F ++ L +K
Sbjct: 6 FLLPALAGIMFGSSGIFVRTLTENGIDPTTLLFLRFSIAAVVMFVCVLLTDKSLFKIKKE 65
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + L + L L + FV LG +++
Sbjct: 66 YLPYFIIAAISIVGLNLCYNEAMNSIHLSLAAVLLGTSPIFVIIGAYFTLGEKITVKKVG 125
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + I+ S + + I L+ + V + +C C+L
Sbjct: 126 SMFLAIVGCILASGFLESSIGSISLIGVLGGVGAAVFCAVYTLDSTKVINKGCHTYCILF 185
Query: 205 IPALFYVVWNGFS------GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V+ ++ + + + + + +
Sbjct: 186 YSLILIVILLLPFTNFGQINHYVNVNPLSNVLFLILHSFISFALPYICLTTALNYVESGV 245
Query: 259 VGIMEY-TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
I+ P+ ++ + + + IV++A+V+
Sbjct: 246 ASILLSGCEPIAALIFGIICYFEIPTVLMLCGLVIVIVALVIL 288
>gi|149910687|ref|ZP_01899323.1| hypothetical protein PE36_00905 [Moritella sp. PE36]
gi|149806226|gb|EDM66203.1| hypothetical protein PE36_00905 [Moritella sp. PE36]
Length = 287
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 97/284 (34%), Gaps = 16/284 (5%)
Query: 30 VFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + + I + + + V E+++ R + SL + + K
Sbjct: 1 MLMSALAFAIMTSLVKLVSTYGIPVFEIVAARAMVSLIISYVDV--------RRKRISVW 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L+ + ++ +A+ T + ++ PV + L +FLKER+
Sbjct: 53 GHNKKLLMARGAVGSLALICVYFAVTTLPLAEATILQYLHPVFTAILALIFLKERIQRST 112
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGSSEGFFIEMC 201
II L I+ LL++ S + + A A + V G
Sbjct: 113 IICILFCIVGLLLIVSPSLTFSGTAELPLFSVVVALLGALGSAIAYVIVKRLSGTEDSSV 172
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ L + + G+ F + NI + LI G+ + ++ S
Sbjct: 173 IIFYFPLVALPLSLILLGDDFVVPNIEAFVLLIFIGIFTQIGQVGLTKAMQTEVASKATA 232
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y + I+ + + I ++++ ++ + ++
Sbjct: 233 YSYVQVVFSIIFGWLLFSEVPSLWTWIGGSLIILGALINVFGSL 276
>gi|114769139|ref|ZP_01446765.1| integral membrane protein [alpha proteobacterium HTCC2255]
gi|114550056|gb|EAU52937.1| integral membrane protein [alpha proteobacterium HTCC2255]
Length = 322
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/314 (13%), Positives = 105/314 (33%), Gaps = 25/314 (7%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYF 74
++ + +G L A + + + +FL L +++ R ++ I+ F
Sbjct: 2 STSSPPLSTLGVLCALAASFAFTLNDVGIKFLSGDYPLHQIVLVRAFVAIFITLIIIIPF 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GG LL+ + + + F L + +FV+P+I
Sbjct: 62 EGGYHLLRTRQLK-----LHLLRGAFVVSANMLFFLGLAEIPLSEATAIFFVSPLIITLF 116
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL E++ + A ++ ++ ++M S + +A+C+A I
Sbjct: 117 SVIFLSEKVGPWRWFAVIMGLVGAVVMLRPSLNSFQLAGLFPIGAAFCYASLHILTRKMG 176
Query: 195 GFFIEMCVLAIPALFYVVWNGF-------------------SGGEHFFLGNIPDTLFLIG 235
+ +++ + + N D + +
Sbjct: 177 RDEKASTMSFYLQFTFIIVSITMGLAFGDGKYADQDSSALEFLLRPWVWPNQFDLIIMTC 236
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
G+ ++ S + ++ + + +EY A +L + + I + D V +++
Sbjct: 237 IGIASAVGGYTISQAYRLSEAAIIAPIEYVALVLAVFWGIAIFNEWPDGVAWTGIALILS 296
Query: 296 AMVVYLLPTVINSG 309
+ ++ L I
Sbjct: 297 SGLLMLWREAIAKK 310
>gi|322373555|ref|ZP_08048091.1| integral membrane protein [Streptococcus sp. C150]
gi|321278597|gb|EFX55666.1| integral membrane protein [Streptococcus sp. C150]
Length = 305
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 101/301 (33%), Gaps = 8/301 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV-LEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G+L V A I WG + + Q+L V + +++ L + A V+F
Sbjct: 2 SKQLKGSLMVLTAGIAWGFSGVSGQYLMAHGVNVNLLTSLRLLLSGILLTASVFFRQRDK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L++ V + +F+ L ++ ++ A+ + +VTPVI +
Sbjct: 62 LVQAIKDRKTLVSIALFALFGLVLNQYAYLSAIQYTNAGTATVLQYVTPVIILAFVCAKY 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGS 192
+ +++A +L I+ + H L + + +
Sbjct: 122 RRFPTAAELVAIILAIVGTFTIATHGQIRELAITPLGLFWGLFSAVTYALYILLPAKAIE 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G I + + + + L + F + +F G
Sbjct: 182 KWGSLIVIGLGLLIGGLIFPIAIQAWKYKLSLNGGNLLALFGLVFIGTVFAYTVFLKGTT 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ P+ ++ +V I+ + + ++V+A+++ L ++ K +
Sbjct: 242 MVGAVKGSLLASVEPVASVILTVLIMGDRFFAIDVLGMFLIVLAVIIISLKNLVALKKQE 301
Query: 313 T 313
Sbjct: 302 K 302
>gi|300917003|ref|ZP_07133701.1| integral membrane protein DUF6 [Escherichia coli MS 115-1]
gi|300415755|gb|EFJ99065.1| integral membrane protein DUF6 [Escherichia coli MS 115-1]
Length = 318
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 95/308 (30%), Gaps = 19/308 (6%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLW 62
G K +S S P + + ++W + ++ + + + + + R ++
Sbjct: 8 GERKLHTGSLMSASGKSNP--LAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIF 65
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+F ++ G ++ L + G +AL++ +
Sbjct: 66 GALVLFIVLLLRGRG-------MRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAI 118
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------- 175
+ P V ++FL ERL Q A L+ L ++ + S+ A
Sbjct: 119 LSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSG 178
Query: 176 --VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
SA R + + + AL V
Sbjct: 179 VSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALA 238
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
L + + ++ + +K S + P+ ++ S ++L + V ++
Sbjct: 239 YSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLI 298
Query: 294 VIAMVVYL 301
V+A+ +
Sbjct: 299 VLALALVS 306
>gi|297570641|ref|YP_003696415.1| RarD protein, DMT superfamily transporter [Arcanobacterium
haemolyticum DSM 20595]
gi|296930988|gb|ADH91796.1| RarD protein, DMT superfamily transporter [Arcanobacterium
haemolyticum DSM 20595]
Length = 332
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 116/291 (39%), Gaps = 8/291 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + + + + E ++ +E+ + R++ ++PGV ++ +
Sbjct: 4 RGVVISLLSSVAFAMFSYIAALTEPLTGVELWAWRMVMTVPGVLLVLLITKRFSWFTGEW 63
Query: 85 LK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +PK + F A +LA F +A + YF+ P++ V +G VF KE
Sbjct: 64 DRVRSDPKKLIAYAFCAPMLAGQMWLFGWAPQVGRTLEVGMGYFLMPLVMVVIGRVFYKE 123
Query: 142 RLNHLQIIAALLIILSLLIMTL-HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
R+ L ++A ++ ++ GI ++ IA+ + AY R+ EM
Sbjct: 124 RMTPLMMVATVIAACAVAYEAWRAGGIGWVASFIALGYPAYFVVRRYFETDGVGALAWEM 183
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ +L+ + + + L L +L + +K G
Sbjct: 184 ALALPVSLWVAAGSHSIQSAFSSVSLVLILLSLGALSVLGVITYV---LAVKWLSYGMFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ Y P+L+I+ ++ L + ID + + + +++ + + VI K
Sbjct: 241 LLSYVEPVLVIIVAIL-LGERIDPTQWWTYVGIWLSVFLLGVDGVIALSKR 290
>gi|255525789|ref|ZP_05392719.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|296186345|ref|ZP_06854749.1| membrane protein, putative [Clostridium carboxidivorans P7]
gi|255510522|gb|EET86832.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|296049146|gb|EFG88576.1| membrane protein, putative [Clostridium carboxidivorans P7]
Length = 320
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/310 (10%), Positives = 93/310 (30%), Gaps = 28/310 (9%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + + A IL+ + + + + +++ R L + A + GL +
Sbjct: 2 KQGYVSIILATILFSSMEVALKLVSGQFNPIQLTFLRFLIGAVILLPAAL---KGLKDRE 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+LK + + V F+ A+L + + + + P+ + L E+
Sbjct: 59 ISLKKDDFKVFALLGFICVVVSMTFYQLAILYSKASIVAILFSCNPIFVILFAYFMLSEK 118
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------------------------AVTW 178
+ I + ++ I++++ + + I
Sbjct: 119 IYKTTIASLVISIIAIITIMNPFHMTNNMYGILFTILAAVTFALYGVIGKKYSKKYGGVV 178
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
++ +A + +
Sbjct: 179 QTCFCFLMGSAEMFLIILISKISFVAQIIQQSKFKVFSDIPILKGITLSSIPGLIFVGVF 238
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + + +++ +T ++ Y P L + ++ IL++ I+ + ++VI+
Sbjct: 239 VTGLGYTFYLLAMEKTSAATASLVFYIKPALAPILALIILREVINLNTIVGIVLIVISSS 298
Query: 299 VYLLPTVINS 308
+ + +
Sbjct: 299 ITFISNKKRT 308
>gi|229089884|ref|ZP_04221139.1| Transporter, EamA [Bacillus cereus Rock3-42]
gi|228693509|gb|EEL47215.1| Transporter, EamA [Bacillus cereus Rock3-42]
Length = 320
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|229103009|ref|ZP_04233698.1| Transporter, Drug/metabolite exporter [Bacillus cereus Rock3-28]
gi|228680424|gb|EEL34612.1| Transporter, Drug/metabolite exporter [Bacillus cereus Rock3-28]
Length = 295
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 92/291 (31%), Gaps = 10/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F + ++ + L + +R+L++ + +++ + LK K
Sbjct: 8 YFILFFGVFALSTSAIFVK-LADAPAAIIAFYRLLFATVILLPLLLFNKRNRNELKTLSK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G S LA H+ + +L ++ + P+ S+ G KER
Sbjct: 67 K--QWGFGFLSGLFLAAHYVLWFESLQYTSVASSTVIVTLQPLFSMIGGYFLFKERFTKG 124
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+I L+ I +++ + +A F
Sbjct: 125 AVIGCLIAISGSIVIGWQDFQISGDALYGDILAFMAAGIITAYFFISQHIRKDLSLIPYS 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A F ++ F+ + IF++ +K + +
Sbjct: 185 VISYGSSACFLGIFAYMQQQSFIHYATQTWLSFIGLAFIATILGQTIFNWLLKWMSATVI 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + V + FIL + I + + I+ I + ++LL + + K
Sbjct: 245 SMSILGETIGTCVLAYFILSETITLQQALGISIIFIGLTLFLLQPKLANRK 295
>gi|169829893|ref|YP_001700051.1| putative transport protein [Lysinibacillus sphaericus C3-41]
gi|168994381|gb|ACA41921.1| Hypothetical transport protein [Lysinibacillus sphaericus C3-41]
Length = 315
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 98/307 (31%), Gaps = 22/307 (7%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + G++ L + L S ++ ++HR + G+ +V+ L++
Sbjct: 11 EKRKAYIAAISYAFVIGLSFLCVKLTLSVASPIDTLAHRFTVAFIGIVILLVFTKNKLTI 70
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + +L + V + F + L P+ ++ L S+ LK
Sbjct: 71 -----KKQDLLKILPLALLYPIVFFTFQVLGLARISSSEAGIIQATIPIFTLALASLLLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
E+ Q +A + +L ++ M + +G I + ++A + +
Sbjct: 126 EKATWGQYVAISISVLGVIYMLMMNGANATTGNIFGSGFILLSAFAASIYNVFARRLTKQ 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
V+ + FL L L +
Sbjct: 186 YSLLTLTYVMTLCGFVIFNGIAIGDHVMKGTIHDFYKPFLHVDFIIAILYLGLLSSLGTS 245
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +Y + + S + + A L+ I + V L + I ++V+ ++
Sbjct: 246 YLSNYALSILEASKMSVFSNLATLITIFAGVLFLHETFQKYHLIGGVMIVMGVIGTNYFG 305
Query: 305 VINSGKN 311
+ KN
Sbjct: 306 MKRVAKN 312
>gi|90581331|ref|ZP_01237127.1| transporter, drug/metabolite exporter family protein [Vibrio
angustum S14]
gi|90437441|gb|EAS62636.1| transporter, drug/metabolite exporter family protein [Vibrio
angustum S14]
Length = 288
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 93/278 (33%), Gaps = 10/278 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L + + ++ + + L V L+ + R + SL + +
Sbjct: 2 KQTAVSLGILLLIFGNLSASLSDVAVKLLNGEVHPLQYMFLRQVISLIIILPFWLSQPKP 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ N +++ +++L V L + ++ P++ + L V
Sbjct: 62 QREVGSWKINTIRAYLVLAGSSMLLVA-------LTYLPLATANALFYAAPLLMIPLSIV 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E ++IA + + +LI+ AIA +A A + V
Sbjct: 115 LLGEYPTKGKVIATAIGFIGILIVLRP--TQFHWAAIAALGTATTLALYNVLVRKLPQSQ 172
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L ++ + + ++ + + L ++++
Sbjct: 173 TVSSTLFWTSVLSLPVATPLAWYFWQPISLENLGLIAASALFTLGYQGCVVLAYRQSETH 232
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+G+ EY+ + + + + +DT+ I ++V+
Sbjct: 233 KIGLAEYSGLIFVALFGWIWFNESLDTLTLIGILLIVL 270
>gi|319784456|ref|YP_004143932.1| hypothetical protein Mesci_4773 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170344|gb|ADV13882.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 295
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 7/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L AY+L+ + L +SV +++ R + GG
Sbjct: 9 TRERVLAGILLTGAAYLLFSTQDASIKLLVVGMSVWQIMFFRSIT-----ILGACAAIGG 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L DT+++P MLV SA LA W + A + Q + Y+ P+I L
Sbjct: 64 RQLFADTMRSPIVRPMLVRSAFTLAA-WLCYYNAARSLQLAELTTVYYAAPIIVTVLSVF 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ L+ +A L+ + I + + L + V +A+ + + + +
Sbjct: 123 LLGEKVPMLRWLAVLIGFAGVFIACDPTHLGLSVPVLLVLAAAFLWGIAIVLLRRTALAE 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M L + ++++++ + + L L G L + G+KR S
Sbjct: 183 RSMIQLLLNNFYFLLFSAVPALLWWRTPDWTQLLLLASVGALGGLAQYLLFEGMKRTPAS 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +EYT+ L I + ++V A ++ +
Sbjct: 243 VLAPLEYTSLLWAFALGFAIWGDVPRREVFLGAALIVAAGLLIVGTEHFRKR 294
>gi|255527556|ref|ZP_05394422.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|296186080|ref|ZP_06854485.1| putative protein RarD [Clostridium carboxidivorans P7]
gi|255508759|gb|EET85133.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|296049348|gb|EFG88777.1| putative protein RarD [Clostridium carboxidivorans P7]
Length = 302
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 88/278 (31%), Gaps = 13/278 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + +++G L+ + + + + R + +F S
Sbjct: 21 LVASMLIFGSIGLFVRNI-DMPSSIIALVRGIIGSTFLFIISYVMHRNASFKAIKANLLP 79
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ S + +W F A + Y+ PV+ +FL LKE+LN +++
Sbjct: 80 LMV----SGAAIGFNWIFLFQAYKYTTIAKATLCYYFAPVLVIFLSPFILKEKLNATKVM 135
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AYCFARKTIPVGSSEGFFIEMCV 202
+ ++ + ++ + + G M
Sbjct: 136 CIIGAMIGMFLIVGIGSSAAEKNQFLGILYGTTAAILYASVIITNKFIKNLSGMESGMVQ 195
Query: 203 LAIPALFYVVWNGFS-GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + A+ + + + L L L+ + + ++ I + K T+ +
Sbjct: 196 LGVAAVVLLPYVFVTEKISIIQLNFKAILLILVVGIVHTGIAYLLYFSAILKLKGQTIAV 255
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P+ I+ S L + + ++ +++ +
Sbjct: 256 FSYIDPISAIIMSSVFLGERMTIIQLFGGILILGTTFI 293
>gi|297566594|ref|YP_003685566.1| hypothetical protein Mesil_2188 [Meiothermus silvanus DSM 9946]
gi|296851043|gb|ADH64058.1| protein of unknown function DUF6 transmembrane [Meiothermus
silvanus DSM 9946]
Length = 295
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/280 (9%), Positives = 76/280 (27%), Gaps = 7/280 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVS----VLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L + YI+W T L + + + R + + + L L
Sbjct: 7 GLLHLLVVYIVWSSTYLAFRVGVGPGGGWEPFLMGAARFIPAALILLGYAYARRQRLWLS 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ G++++ + + + + + ++
Sbjct: 67 REEFATLCFTGLMMWVGGNGLILIAAQYAPSNYQALMIAASPIWANAFEALLDRKRPAPL 126
Query: 142 RLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ L I + +LS+ + S + L ++ + + +
Sbjct: 127 LIYGLLIGLVGIGVLSVPKLAQPTPTSLLSFFLLLVSPICWSAGSVITQRRPFVLDAVVV 186
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +++ G + + + + ++ LS
Sbjct: 187 SGYQQLFGGIGFLLIAPLLGEHGSSPSLAGWGALVYLIAAGSLLAYTSYILAVRLLPLSI 246
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
V Y P+L +L + + +V+I +
Sbjct: 247 VMTYAYVNPVLTAFLGWLLLGEQLTGWTLAGAALVLIGVA 286
>gi|78776601|ref|YP_392916.1| hypothetical protein Suden_0400 [Sulfurimonas denitrificans DSM
1251]
gi|78497141|gb|ABB43681.1| Protein of unknown function DUF6, transmembrane [Sulfurimonas
denitrificans DSM 1251]
Length = 295
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 96/290 (33%), Gaps = 23/290 (7%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G ++ A +L+ + + + +S LEV+ R ++ + + +A+
Sbjct: 10 GVKYMLIASLLFAVMGAFAKLASEHMSSLEVVFFRNIFGVIFIGYALY--------KSPM 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+L F + + + Y + P+ + FL E+L+
Sbjct: 62 KSRGGKPYLLFFRGLMGFLSLLAYFYNIANISLGDAVTYSKTAPIFTAIFAWFFLNEKLS 121
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------------AYCFARKTIPV 190
IA + ++++ SGI + +S + + I +
Sbjct: 122 LNAWIAVFIGFCGIVLIAQPSGIGFSKYDMLGIFSGVGAALAYTSIRELKEYYDTRMIVL 181
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + +L I + ++ + F L + ++++G G L + +
Sbjct: 182 SFTFVGTVAPILLFIISKYFYISALDFMLGEFVLPSGVVWVYIVGLGTLGTLSQYFMTKA 241
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
K VG + YT + I V + V ++V A ++
Sbjct: 242 YGETKAGIVGAVSYTNIVFAIFIGVVLGDAYPSVVSACGIALIVSAGIMV 291
>gi|57234991|ref|YP_180902.1| hypothetical protein DET0152 [Dehalococcoides ethenogenes 195]
gi|57225439|gb|AAW40496.1| membrane protein, putative [Dehalococcoides ethenogenes 195]
Length = 297
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/290 (8%), Positives = 82/290 (28%), Gaps = 12/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++T+ L + + S R+L + + L
Sbjct: 6 YLLLLLGVFGIAAASVFTR-LADAPPIIITSLRMLAATCLLLPFAA----KPVYLAIKRL 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +++ + ++ + F++ +L + PV+ + V +E+L+
Sbjct: 61 SRRNLLLIILAGFLVGIDQLFWVSSLEYTSIASSVILVTAHPVLVAIMSYVMWREKLSPK 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSEGFFIE 199
I L + ++ L + + + +
Sbjct: 121 AIGGVLSAFGGMALINLATSQVGEQAFLGNMLALAATIPTTGYLIIGRQMRSHIDFLPYI 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A+ + SG + + + + + ++ V
Sbjct: 181 TLLYGSAAITLLAGAFLSGESFSGYTSTTYLMIFLLAVVSQLVGHSCLNMALRLVSALVV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ I+ L + + + +V+ + + +L
Sbjct: 241 SVAILGEPVGAIILGYIFLGEGLTLNEFLGGMLVLAGIFIVMLNQPRTKK 290
>gi|326508258|dbj|BAJ99396.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 84/288 (29%), Gaps = 12/288 (4%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG + + + + V + R+L + V A G
Sbjct: 102 FFFWGTAMVAMKGVIPKTGPFFVAALRLLPAGALVVAFASARGRKQPSGWAAWGAIAAFG 161
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA- 151
++ + + G + + S V + ++F G + L +
Sbjct: 162 LIDAACFQGFLTEGLQKTSAGLGSVIIDSQPLTVAILAALFFGESIGAIGVGGLLLGVVG 221
Query: 152 -------LLIILSLLIMTLHSGIPLLS---LAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L + SG + ++AV + K + G+ + +
Sbjct: 222 LLLLEVPALSVEGNNTSVWGSGEWWMFLSAQSMAVGTIMVRWVSKYSDPIMATGWHMVLG 281
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + + G L ++ + ++ Y R L+T+
Sbjct: 282 GIPLLVISVLNHDPALNGHIQELTWSDIAALGYTSIFGSAVSYGVYFYNATRGSLTTLSS 341
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + P+ + L + + + ++A+ + ++I
Sbjct: 342 LTFLTPMFASIFGFLYLGETFAPEQIGGALLTLVAIYMVNYKSIIGEK 389
>gi|268320177|ref|YP_003293833.1| putative permease [Lactobacillus johnsonii FI9785]
gi|262398552|emb|CAX67566.1| putative permease [Lactobacillus johnsonii FI9785]
Length = 297
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 88/298 (29%), Gaps = 12/298 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ T A + WGI+ L+ + L ++ + + R++ S +
Sbjct: 2 TKKRLWTCLAALACVFWGISGLFAKGLFNISSSITPIWISQVRMIVSGVLLLIFAQITGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LK A+ ++ + L + + + + F+ P +F
Sbjct: 62 --RPLKTMTDKKDAITVIAYGLLGLLPVQYCYFIVVQQANASIATVLQFIGPFFVLFYMV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPV 190
VF + L + +IAA++ + + + H P + ++
Sbjct: 120 VFEHQVLRAVDVIAAIVAFIGVFFLATHGHFNQLSLTPSVLFWGLISAVGVATNTLIPRR 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + L + F
Sbjct: 180 LLDHTSSLVVTGWGLLFSGIALVIAHPVWPKIPNNINVFWLMAGIIVIGTLIPFQWMMGS 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST +++ P+ + SV I + + + +++ A++ +
Sbjct: 240 LRYIKPSTASLLDAFEPVSATIGSVIIFGLVMAPIDWVGSIMIICAVLALNWEPKHHK 297
>gi|261219003|ref|ZP_05933284.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261321497|ref|ZP_05960694.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260924092|gb|EEX90660.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294187|gb|EEX97683.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 319
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 97/293 (33%), Gaps = 14/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ M+G + ++ + E V V ++I R +++ + + G
Sbjct: 16 MNPMLGIGLKIASVAVFVAMSTLLKAAEGVPVGQLIFFRSFFAIFAILLYL-----GWRG 70
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + +AL + +P+I+V LG+ L
Sbjct: 71 QLGGVFSTRHGFSHFWRGLVGVCSMSMSFFALTKLLLPEAIAINYASPLITVILGAAILH 130
Query: 141 ERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVG 191
E + + A L+ + ++I+ G A+A +A A + V
Sbjct: 131 EVVRFYRWSAVLIGLFGVMIIIWPRLTLFSAGSVGRDEAVGALAALGAAVMSAVAMMLVR 190
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ ++ V S + + N L+G G + +
Sbjct: 191 RLVQTERTPTIVIYFSISASVIALVSLPFGWVVPNWSQLAMLVGAGFAGGIGQILLTECY 250
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A +ST+ EYT+ LL +V + I GIV+ A +
Sbjct: 251 RHAPMSTIAPFEYTSMLLGLVIGFMLFGDIPTFEMLIGSGIVMAAGGSIIYRE 303
>gi|254523552|ref|ZP_05135607.1| integral membrane protein [Stenotrophomonas sp. SKA14]
gi|219721143|gb|EED39668.1| integral membrane protein [Stenotrophomonas sp. SKA14]
Length = 295
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/274 (11%), Positives = 92/274 (33%), Gaps = 8/274 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M L + + + +G+ + ++ V EV R + L + ++ +
Sbjct: 1 MRAALLMLGSTMAFGLMAVAIRYATRYVPTQEVAFFRNAFGLLALLPMLLRPGHAPLKTQ 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + I +AL + TP+ ++L E
Sbjct: 61 QLPR-------YFLRSAIGLGSMLCAFWALGHLPLAQAVSLSYSTPLFVTIAAVLWLGET 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A ++ + +L++ + ++ +A + I + V
Sbjct: 114 VRVRRWAAVVIGFIGVLVIVRPGTAGFTAGSLVAVAAALLSSLVAIQIKQLTRVDSADTV 173
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ +F+V + + L+L+ G+L + +++ ++ ++S + +
Sbjct: 174 VLYTYVFWVPLSLVPALFVWVWPTGTAWLWLLATGVLGTIGQLLWTRALRLGEVSALTPI 233
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ L+ + + + +D GI++ A
Sbjct: 234 SFLQLPLVTLFGWLLFNESVDRWTITGAGIILAA 267
>gi|168186978|ref|ZP_02621613.1| integral membrane protein [Clostridium botulinum C str. Eklund]
gi|169295088|gb|EDS77221.1| integral membrane protein [Clostridium botulinum C str. Eklund]
Length = 305
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 83/300 (27%), Gaps = 11/300 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + + + +WG+ + + E + + R + IVYF+G
Sbjct: 1 MSNKRLGANVLLLITAAIWGLGFVAQRVGAENLGAFTFNAIRFGLGGVSLIPLIVYFNGN 60
Query: 78 LSL-----LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + L + L F + V+
Sbjct: 61 KKKDHSDEIAIEGNFKTQILPGIMLGIALYIAATLQQIGLAYTTAAKAGFITGMYIVLVP 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTI 188
+G ++ + + + I+ L +++++S + + + + A
Sbjct: 121 IMGVFIGQK-IEKSSCVGIMFSIIGLYLLSINSNFSISNGDLLEIIGAIFWATHILMIDY 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ ++ L G L + +
Sbjct: 180 FSKKVDSLKLSCIQFITCSILSLLTALGFEVITLQAIYNAMVPLLYGGFLSVGVAYTLQV 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K AK S I+ + V V +L + + I +++ ++ +
Sbjct: 240 VAQKSAKPSHAVIILSMEAVFGAVGGVLLLGEEMTRRGFIGCAFILVGILASQIKFPRKK 299
>gi|332073784|gb|EGI84262.1| hypothetical protein SPAR68_1455 [Streptococcus pneumoniae GA41301]
Length = 298
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 100/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGTLMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLVIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + T+ + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYTIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|309750358|gb|ADO80342.1| Hypothetical protein R2866_0359 [Haemophilus influenzae R2866]
Length = 300
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/292 (19%), Positives = 118/292 (40%), Gaps = 5/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 10 QGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSLI 69
Query: 85 L----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + F++A L +G + YF+ P+I LG +LK
Sbjct: 70 TTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWLK 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ +Q IA LL + H+ ++ V + + I +
Sbjct: 130 ERLSFIQKIALLLAACGVAHEVWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGITL 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I ++ S L L G++++ ++ +S
Sbjct: 189 DIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIFA 248
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 249 VLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 300
>gi|237741971|ref|ZP_04572452.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|229429619|gb|EEO39831.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
Length = 301
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/301 (11%), Positives = 86/301 (28%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G +F A +WG + ++++ R + ++ + ++
Sbjct: 1 MNKKRYFGDFMLFLAAFIWGTAFVAQVTGMDRIGPFTFNMARSVVAIICLGAYLIITKAK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L V + + L T F +I FL +
Sbjct: 61 LPKDIGVLLQGGLVC-----GFFIFMGTSLQQIGLQYTTAGKTGFITSFYILIIPFLTMI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVG 191
FLK +++ L I+ ++ + L ++ + + + +
Sbjct: 116 FLKHKIDLLTWISIIIGFIGLYLLAIPNLKDFAINRGDFVVFLGSFCWGGHILIIDYYSK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP--DTLFLIGYGLLNSFVFCIFSY 249
+ + + + E + NI L + + +
Sbjct: 176 KVSPVELSFLQFVVLTILSGICALLFENETATMNNIFLSWKSIAYAGFLSSGIAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K ++ + ++ F+L + + + IV +A++ + I
Sbjct: 236 GQKYTNPIVASLILSLEAVFAALAGYFMLDEVLTSREFFGCSIVFLAIIFSQISKDIFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|229177110|ref|ZP_04304499.1| Transporter, drug/metabolite exporter [Bacillus cereus 172560W]
gi|228606291|gb|EEK63723.1| Transporter, drug/metabolite exporter [Bacillus cereus 172560W]
Length = 308
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 100/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + + F + + LI + + F ++
Sbjct: 183 ACGTTIVIGWGMLIGGIALLIYNHSFGWNQFSQTFTLKTFSMLILIIISGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 243 LEYLAATETSILSSIEPLVAAIVSITWLSESFGAYQLLGGICIVLSVIFLTMPQ 296
>gi|158336330|ref|YP_001517504.1| hypothetical protein AM1_3192 [Acaryochloris marina MBIC11017]
gi|158306571|gb|ABW28188.1| conserved hypothetical membrane protein [Acaryochloris marina
MBIC11017]
Length = 318
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 104/283 (36%), Gaps = 10/283 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY--FSGGLSLLKD 83
L + A + + ++ + E ++ I +R + ++ + G +K+
Sbjct: 21 FLAMLAAIVALSLAAIFIKLSERELGPFATIFNRFWVAYIVLWVWHEWESLRGSKEAVKE 80
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ G+LV +A + + ++L + ++ + +TP+ + G + L++R
Sbjct: 81 IEYTQRDQGLLVAAALMFWGCIALWAWSLTRTEVANSTLLHNLTPLFTTLGGWLLLQQRF 140
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGF 196
+ ++ ++ I+ + +++ S ++ +SA
Sbjct: 141 DRRFVVGLVVAIIGAVALSVGDFQVSTSHLTGDLASLLSAVFSAANLMIIERLRAKFSVN 200
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I A++ + + F + + + + ++ +KR
Sbjct: 201 TILQWCCFWGAIWTLPVVLLTEDRLFPVSASGWLSVICLAIVCQVLGQGLQAFSLKRLSS 260
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
VGI+ P+L +++ + + + ++ F +V++ + +
Sbjct: 261 GLVGILLLLDPVLAALTAWVLFAESLTLLKWTAFFVVLLGVYL 303
>gi|153812127|ref|ZP_01964795.1| hypothetical protein RUMOBE_02524 [Ruminococcus obeum ATCC 29174]
gi|149831782|gb|EDM86868.1| hypothetical protein RUMOBE_02524 [Ruminococcus obeum ATCC 29174]
Length = 269
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/257 (10%), Positives = 73/257 (28%), Gaps = 8/257 (3%)
Query: 57 SHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQ 116
R L + + + K + YA+
Sbjct: 19 FFRNLVAAVFAAIILTRKHMVPRVQKQYWGPLFLRCAF------GTLGILCNFYAIDHLL 72
Query: 117 GFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV 176
S ++P ++ + LKE++ Q L + L + + +
Sbjct: 73 VADASILNKLSPFFAIIFSFLLLKEKITPTQGACVFLAFIGCLFVVKPGFQNAALVPALI 132
Query: 177 TWSAYCFARKTIPVGSSEGFFIE--MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
A + G ++ ++F ++ + + L+
Sbjct: 133 GVCGGLGAGVAYTMVRVLGTHGVKGPIIVFYFSVFSCLFVLPYLIFDYTPMTGRQLVTLM 192
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
GL + + A + I +Y+ + + F+ + DT + +G+++
Sbjct: 193 MAGLFAAGGQFTITAAYTYAPAGKISIFDYSQIIFATLLGFFLFGEIPDTYSFVGYGLII 252
Query: 295 IAMVVYLLPTVINSGKN 311
A + + + + K+
Sbjct: 253 FASLGMFIYNMKAAKKS 269
>gi|152986160|ref|YP_001350190.1| hypothetical protein PSPA7_4854 [Pseudomonas aeruginosa PA7]
gi|150961318|gb|ABR83343.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 296
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 92/297 (30%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +W + + + E+ R W L G+ L +
Sbjct: 3 YLFPLLAVFIWAGNTVVNKLAVGVIQPAEIGFFR--WLLVGLALTPFMLRPVLRNRR--Y 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ +AV+ YA + P++S+ L S L RLN
Sbjct: 59 IRANLGRLVLLGLLGMAVYQSLAYYAAALTSATNMGIILSLMPLMSLGLASSILAHRLNP 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ AL+ + ++++ G+ L + V +Y + S +
Sbjct: 119 GAVLGALVSLAGVVLVISQGHLGALLEHGVNLGDAMMIVATLSYAVYSVLLKKWSLQLPA 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++M L + + + L L L + + +G+ R S
Sbjct: 179 MQMLYLQVLVAILALLPLYLLSPRSGLNAANLPLVLYAALFASIVAALAWMHGVARLGPS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + P++ + +L + + + + + +++ +
Sbjct: 239 RMALFFNLLPIITACIATLVLGERLTVHHLVGGALTLAGVLLAEFWQRRPARLRSAS 295
>gi|323490944|ref|ZP_08096139.1| hypothetical protein GPDM_16291 [Planococcus donghaensis MPA1U2]
gi|323395424|gb|EGA88275.1| hypothetical protein GPDM_16291 [Planococcus donghaensis MPA1U2]
Length = 304
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 88/304 (28%), Gaps = 19/304 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L I+WG ++ L V + + + R+L + V + F
Sbjct: 5 KIYGILTAV--MIVWGFNLSAVKYMLGYVDPVTLTAFRILLAGLSVMAILASFKMFRWPA 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K K +L A + G I G P+++ L S+ ++
Sbjct: 63 KSEWKFIFLGSLLNVVAHHYFLSNGLSI-----TTGSNAGLILGTGPMLTAVLVSLIMRN 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ LQ + ++ + + L + + + + +
Sbjct: 118 YPSKLQWLGVVIGFAGVAATVMVGSGATSGLNVGDIFVFISILAQVLSYIVIANAARTLD 177
Query: 202 VLAIPALFYVVWNGFSGGE-----------HFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ ++ + + F+ L + +++Y
Sbjct: 178 PRILTGYMFITGSLVLFIISLLQEPGEIKAFAAVPLSFWVAFVFSAMLGTAVGHMLYNYS 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I +A + I L +V + +L + I ++VI ++ K
Sbjct: 238 IGQAGPTKAAIFMNLNTLFSLVGASVLLNEKITLGHIYGLVLIVIGVLFGSGAAEDLLKK 297
Query: 311 NKTK 314
K +
Sbjct: 298 RKKR 301
>gi|297170800|gb|ADI21821.1| permeases of the drug/metabolite transporter (DMT) superfamily
[uncultured nuHF1 cluster bacterium HF0130_24M16]
gi|297181594|gb|ADI17779.1| 7 permeases of the drug/metabolite transporter (dmt) superfamily
[uncultured nuHF1 cluster bacterium HF0130_31E21]
Length = 325
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 87/290 (30%), Gaps = 9/290 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G F+ + ++L V +++ R ++ L + + F+ L
Sbjct: 39 LKGIFFMIAGGVFLTANDALLKWLTSDYPVGQIMFLRGIFVLIPLLIFVWIFNRTGVLAT 98
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L G L+ T L V F+ L L+E
Sbjct: 99 RNLGKHLLRGGLMVCGTFLFVTGLIFLPLAEAISIAFAGPL------FITTLAPYLLQEH 152
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + I L+ +LI+ A+ +++ A + I +
Sbjct: 153 VGLRRWIGVLIGFTGILIIFQPGTGVFQWAALLPLGASFTGALRDILTRKMSVSESSEAL 212
Query: 203 LAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + + + D + + GLL + A+ S V
Sbjct: 213 LLYSTIAVALGGLATAPFTQWRSVGFEDWMLFVMTGLLIGVAHFFMIEAFRFAQASQVAP 272
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVYLLPTVINSGK 310
+YT+ L ++ ++ I +V+ + ++ V+ +
Sbjct: 273 FKYTSVLWALMIGYWVFGDLPTLENVIGAAVVISSGLYLFHRERVLGIRR 322
>gi|163792254|ref|ZP_02186231.1| hypothetical protein BAL199_15443 [alpha proteobacterium BAL199]
gi|159181959|gb|EDP66468.1| hypothetical protein BAL199_15443 [alpha proteobacterium BAL199]
Length = 283
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 76/281 (27%), Gaps = 8/281 (2%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + +F + EV R + L + ++
Sbjct: 1 MTLAGAAFATMGGLIKFAARDLHPFEVAFFRCFFGLVWMAPWLLRHG-------TGALRT 53
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + AT+ + YAL + F P+ + ++FL E + +
Sbjct: 54 QRLPLYAIRATVGLIGMLAGFYALRYIALADATALSFTAPLFATIGAALFLGETVRRRRW 113
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A LL + +LI+ + A+ +A A + V V+ +
Sbjct: 114 TATLLGFVGVLIILRPGVTAVEPAALWTLLAAATTAINVLIVKRLTDTEPIEAVVTWMVV 173
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + + L GL + + G + S V EY
Sbjct: 174 MMTPMTFVAALLFWEWPTLMQWGVLATIGLCGTLGHLAVTRGFAAGEASLVMSFEYVRMP 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + ++ + +
Sbjct: 234 FAAFIGWLVFSEVPTLWTFLGAAVIAGSAAYIAHREATLAR 274
>gi|83949680|ref|ZP_00958413.1| membrane protein, putative [Roseovarius nubinhibens ISM]
gi|83837579|gb|EAP76875.1| membrane protein, putative [Roseovarius nubinhibens ISM]
Length = 332
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/316 (13%), Positives = 101/316 (31%), Gaps = 23/316 (7%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ S + G + + + + + L V +I R S+ + I+Y
Sbjct: 7 TAFQPSSRPLEGMTCLMIGMVFFVVQDALMKTLLATYPVWMLIGARATISVMILVPLILY 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + + AT+ AV + F A + +F P+++
Sbjct: 67 LGRPHRLWTP------LWPLHLIRATLFAVGFCLFYTAFPFMGLAEVTTIFFSAPLMTAL 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L +VFL+E + + +A ++ + +LI G +A+ A+ +A I
Sbjct: 121 LAAVFLRETIGLQRGLALVIGFIGVLIAMRPGGATFQWVAVLPLICAFTYALSQIVARKI 180
Query: 194 ----------------EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
G + + ++ +F F + + L+L
Sbjct: 181 GDRESTLTVGLYTLAPSGPIVALLGWSVNQVFDFGPEFAHLRFEFPIPDGSGILWLAAIA 240
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + S + A S + +Y+ + V + + + ++V +
Sbjct: 241 GAGMMGYILNSRAYQVAPASLMAPFDYSYLPMAAVLGYLLWGEVPPVNTVVGMALIVASG 300
Query: 298 VVYLLPTVINSGKNKT 313
V + + + K
Sbjct: 301 VFIGYREIQTARRAKA 316
>gi|145639864|ref|ZP_01795465.1| hypothetical protein CGSHiII_03655 [Haemophilus influenzae PittII]
gi|145271082|gb|EDK10998.1| hypothetical protein CGSHiII_03655 [Haemophilus influenzae PittII]
Length = 296
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/292 (19%), Positives = 118/292 (40%), Gaps = 5/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 6 QGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSLI 65
Query: 85 L----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + F++A L +G + YF+ P+I LG +LK
Sbjct: 66 TTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWLK 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ +Q IA LL + H+ ++ V + + I +
Sbjct: 126 ERLSFIQKIALLLAACGVAHEVWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGITL 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I ++ S L L G++++ ++ +S
Sbjct: 185 DIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIFA 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 245 VLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 296
>gi|325285311|ref|YP_004261101.1| hypothetical protein Celly_0395 [Cellulophaga lytica DSM 7489]
gi|324320765|gb|ADY28230.1| protein of unknown function DUF6 transmembrane [Cellulophaga lytica
DSM 7489]
Length = 304
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 97/285 (34%), Gaps = 3/285 (1%)
Query: 34 YILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
+WG T + + + + L ++ +R+L++ V IV L + + TL G+
Sbjct: 16 VFVWGFTAVLGKLIT-IDALPLVWYRMLFAALFVLLFIVVRKNKLQVNRKTLLLLLGTGV 74
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
++ + +T + + + V E + L +I L
Sbjct: 75 IIALHWVTFFSSIKVSNVSVTLATISSGAFFAAILEPIWYKRKVIWYEIIFGLIVIGGLG 134
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
+I ++ + L A T + + S F E+ + Y+++
Sbjct: 135 LIFNIDASYKEGIVLALISAFLATVFSLMNGKLIKEHKPSIISFYELGAGVVFLSIYMLF 194
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
G +F L LI ++ F +K TV + P+ I+
Sbjct: 195 QGNFSQVNFQLSVSDWIYILILASFCTAYAFIASVKIMKFLSPYTVMLTTNLEPVYGILL 254
Query: 274 SVFILK--QPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ I + +D + + I++I ++ + + KN +
Sbjct: 255 AFIIFGDSEKMDPMFYLGAFIILITVIANGILKNRTAKKNLKAAN 299
>gi|311105304|ref|YP_003978157.1| hypothetical protein AXYL_02118 [Achromobacter xylosoxidans A8]
gi|310759993|gb|ADP15442.1| hypothetical protein AXYL_02118 [Achromobacter xylosoxidans A8]
Length = 319
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 94/283 (33%), Gaps = 8/283 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++ A +L+G+T ++ + + Q S + R ++++ + F+
Sbjct: 20 SRMTRHRALTYIHVAAVLFGLTGVFGELI-QASAAVITLGRAVFAVLALGL----FARMR 74
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
P + +LV S +LA HW F A+ + + + P +
Sbjct: 75 RKPLLGALTPAQLFVLVVSGALLAGHWVTFFIAVKVGGIAIATLGFASFPAFITLFEGLL 134
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG---IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ER+ + + L+ L+++T + LA + S+ G
Sbjct: 135 FRERIRPTEWLLLGLVTAGLVLVTPSFDLADQGTIGLAWGLLSGLSFALLALSNRRSASG 194
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ +V F+ + L + + +F + R
Sbjct: 195 MDPMQVACWQNLVVALVMLPFAVSQLPALPALDWFWLALLGIFCTGLSHYLFVSSLTRLN 254
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G++ P+ I + + Q ++V A+V
Sbjct: 255 ARSAGLVIALEPVYAIGFAWILFSQEPTPRMMAGAALIVAAIV 297
>gi|302550365|ref|ZP_07302707.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
gi|302467983|gb|EFL31076.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
Length = 322
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 89/290 (30%), Gaps = 8/290 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAY----ILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVF 68
+ + S P L A +LW + + S + R+L +
Sbjct: 1 MMNNSPSRPARRAELLAAGAATVTVVLWASAFVSIRSAGDAYSPGALALGRLLAGALTLG 60
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
+ G + + G+L F ++ ++WG T + + +
Sbjct: 61 LICLLRREGWP-PRTAWRGIAISGLLWFGFYMVVLNWGEQQVDAGTAALVVNTGPIMIAL 119
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS--LAIAVTWSAYCFARK 186
+ S LG L + + A + + L + L +A A +
Sbjct: 120 LGSRLLGDPMPPRLLAGMAVSFAGAVTVGLSMSGEGGSSVLGVVLCLLAAVSYAGGVVAQ 179
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+G++ + + A+ + + G + + + F
Sbjct: 180 KPALGTASPLQVTTFGCLVGAVVCLPFAGQLVRQAADAPASATLNMVYLGVFPTALAFTT 239
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
++Y + R S +G Y AP L+++ S L + + + + +
Sbjct: 240 WAYALSRTTASKMGATTYAAPALVVLMSWLFLGEVPGPLTLLGGVLCLAG 289
>gi|229143197|ref|ZP_04271629.1| Transporter, EamA [Bacillus cereus BDRD-ST24]
gi|228640278|gb|EEK96676.1| Transporter, EamA [Bacillus cereus BDRD-ST24]
Length = 316
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 97/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFLLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNIRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ + LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMMFGSIGLLCIGALQVGLMPFTFSLHALIMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
>gi|159186591|ref|NP_396272.2| hypothetical protein Atu5339 [Agrobacterium tumefaciens str. C58]
gi|159141651|gb|AAK90713.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 303
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 90/296 (30%), Gaps = 13/296 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + ++ ++ + R W + V + + +
Sbjct: 6 LLFSLLAVLIWVGNTIVSKLAAGAIAPGTIAFER--WFIAFVILTPLVYRDAWRHRRTIA 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L +A G YA + + P++++ L +VFL ER +
Sbjct: 64 AHLPKLILLGLLG--MAACQGLGYYAAGLTTATNMAIMLSLVPLLTLILSAVFLAERPSS 121
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L +I ++ + + I+ G+ + AY + +
Sbjct: 122 LAVIGGIISLSGIFIVLGQGDPSRLLSQGVGRGDAMMLAAVLAYAGYGILLRRWAIPLAT 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ I A ++ + L + L + ++ +K +
Sbjct: 182 WTSIYVQIGAAVVLLVPSYLLSAPSALTLPNTAMVLYAAIPGSILAPFVWMTAVKHLGAA 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I P+ + + L + + + G+ V +++ K
Sbjct: 242 RTAIFMNLIPIFTAIVAAIFLGEALYIYHLLGGGMTVAGIILVQRKPFREKSGQKA 297
>gi|15790379|ref|NP_280203.1| hypothetical protein VNG1350C [Halobacterium sp. NRC-1]
gi|169236113|ref|YP_001689313.1| drug/metabolite family transporter [Halobacterium salinarum R1]
gi|10580863|gb|AAG19683.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167727179|emb|CAP13965.1| putative transport protein (drug/metabolite family transporter)
[Halobacterium salinarum R1]
Length = 313
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 73/282 (25%), Gaps = 9/282 (3%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF+ A +WG + + + + V L + R + V + +
Sbjct: 15 VLFLLLAA-IWGSSFVAIKIGIADVPALSFAAIRYSIAGLIVLAYAAHTTDRWRPRGRRE 73
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG-----SVFLK 140
A L + + S + +T + L
Sbjct: 74 WVLAATVGLFVIGIYHGALYLGEHDVSAPIAAIVISLAPILTAGFASKLHENVTIDGTQA 133
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L ++ G+ L+ LA A K G +E
Sbjct: 134 AGLLAGLAGVVIVANPGSAGSVDLGGLLLVFLAAASFALGGVLTGKLPGGGGLPVETMEA 193
Query: 201 CVLAIPALFYVVWNGFSGGEHF--FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ I +L V G + + F ++ ++RA +
Sbjct: 194 WAMLIGSLALWVGAAVRGENVTAVHWTPTALASLAYLTLVCGAGGFLLYFVLLERAGATE 253
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ ++ Y P+ V + + + F ++ +
Sbjct: 254 INLVSYLEPIGASVVAWALFGDVVSPRALAGFAVIFAGFALV 295
>gi|313673077|ref|YP_004051188.1| hypothetical protein Calni_1114 [Calditerrivibrio nitroreducens DSM
19672]
gi|312939833|gb|ADR19025.1| protein of unknown function DUF6 transmembrane [Calditerrivibrio
nitroreducens DSM 19672]
Length = 291
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 86/286 (30%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A + W + ++ + + V + + R L + + FS +
Sbjct: 3 YLLLVGAALFWSGNFVLSRGINELVPPIALGFWRWLIAGVILLP----FSAKYLWRDLEV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + A+ P++ + + + +E+
Sbjct: 59 IKKGFLYFNLLAFLGVTCFNTLIYTAVHYTTAINAVLVNSFVPILILLVSLIIYREKPII 118
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
QI ++ L ++I+ + G L+ +A +
Sbjct: 119 NQISGIIISTLGIMIIMVRGSVDGILNFKFNPGDILVFIAALTWALYTVLLKSLPKEIHP 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F + +L + +F +S F L + + F ++ ++
Sbjct: 179 LSFLQGIIILGLLYMFPFYILEYSIKGGFELNSKTIVSIGYVAIFASVVAFIFWNRAVRD 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G + P+ + ++ L + + I +V +++
Sbjct: 239 LGANRAGPFIHLMPVFGTILAIIFLGEKLYFFHLIGISLVFFGILL 284
>gi|104782397|ref|YP_608895.1| hypothetical protein PSEEN3353 [Pseudomonas entomophila L48]
gi|95111384|emb|CAK16104.1| conserved hypothetical protein; putative membrane protein
[Pseudomonas entomophila L48]
Length = 318
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 76/284 (26%), Gaps = 12/284 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G+L+ A + + ++ + ++ IS L + L
Sbjct: 15 GSLYAVLAALGFSFKAIFVKLAYAAGSVDAISLLALRMALSLPLFDWLVWSSRRQGGAPL 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + F Y L L F P + + + +V +ER
Sbjct: 75 TLSDGLRVALLGLFGYYLASLFDFYGLQYISAGLERLILFTYPTLVLLIQAVAQRERPTL 134
Query: 146 LQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ A L L L I +H G + + Y + S
Sbjct: 135 RTLAAMGLCYLGLGIAFVHDIASSGVGSQVILGSLWVFASAVTYALYYSGTGAMLKRMGS 194
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + L + + + I+R
Sbjct: 195 MRLAGLCGTASSLMVLGHYLLVADVAPLLQLPSAVWMYAALMALFSTVLPIYWVALAIQR 254
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + P+L +++S IL + I + +V+ +
Sbjct: 255 LGPTHTAAVGNLGPVLTVLASWAILNEEISLYQVAGLALVLFGV 298
>gi|161598607|ref|YP_001573822.1| hypothetical protein pBt096 [Bacillus thuringiensis serovar
israelensis]
gi|228905300|ref|ZP_04069282.1| hypothetical protein bthur0014_63780 [Bacillus thuringiensis IBL
4222]
gi|21685474|emb|CAD30136.1| conserved hypothetical integral membrane protein [Bacillus
thuringiensis serovar israelensis]
gi|228854337|gb|EEM99013.1| hypothetical protein bthur0014_63780 [Bacillus thuringiensis IBL
4222]
Length = 299
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 95/296 (32%), Gaps = 16/296 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L VF A ++ + L ++ + +RVL S+P + + +
Sbjct: 10 ILLVFLAICFLATGGIFVK-LSELPPINTGFYRVLLSIPLLLPFV--------WKELNKV 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K + +++ + LA + + + + P++ + KE++
Sbjct: 61 SKKDILLILLAGVFLAGDLILWNVSFYYTSVANANLLANLVPLVIIPFSFFIFKEKITRT 120
Query: 147 QIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
I A++ I ++++ + + + + A+ I
Sbjct: 121 FFIGAIITISGVIVLVSGKAVITTDNLFGDMLAFLTAFFYAFFLLTVYKVRERVSASIIM 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
A+ + F+ G + + + + S+ + + ++
Sbjct: 181 FVSAFGSAVTIFIALLFTEGVYIPSSSSEWLPLIGLAIFSQILGQGLLSFCLGKVNVALS 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ P++ + + FI Q + V + I ++ + + + +K
Sbjct: 241 SILVLLQPIVAAIYAWFIFTQKLTIVEIMGMVISLVGIYIVKMKKKQKVSNKSKEK 296
>gi|33602699|ref|NP_890259.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
gi|33577141|emb|CAE35698.1| putative integral membrane protein [Bordetella bronchiseptica RB50]
Length = 298
Score = 69.6 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 79/295 (26%), Gaps = 16/295 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G + +W + + + + + + I+ R L +F +V L
Sbjct: 8 RVGLGLMLLTIFVWAGSWIAMKLVVPYIGPFDFIAVRYLSGAVVLFSILVATGRPLG--- 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
P L+ +AT + GF AL++ S + P V ER
Sbjct: 65 ----MPPWKLTLLAAATQITGFQGFVQTALISGGVGKVSLMAYTMPFWVVLFAWALQGER 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA--------RKTIPVGSSE 194
L + L+ +A+ + R
Sbjct: 121 PTARHWGGIALAAVGLVCFLDPWAGLGDLAPVALGLCSGLCWGLGTVLSKRMFERHAPDI 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F +L + + G + + + ++ ++R
Sbjct: 181 MTFTAWQMLLGGVVILPFAWLVPQIPAQWGGWRLWLGMSYIVLVATALGWILWLLVVRRV 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S G+ P++ ++ + IL + +++ + V
Sbjct: 241 PASIAGLSSLGVPVVAVLLAWAILGERPTLTEMAGMALILFGLWVVSRAARPAPR 295
>gi|296329853|ref|ZP_06872337.1| putative transporter [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305676579|ref|YP_003868251.1| putative transporter [Bacillus subtilis subsp. spizizenii str. W23]
gi|296152892|gb|EFG93757.1| putative transporter [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305414823|gb|ADM39942.1| putative transporter [Bacillus subtilis subsp. spizizenii str. W23]
Length = 363
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 97/292 (33%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A L + + +++G +++ + E++ R L + + F +
Sbjct: 60 APKQKSTAVLKMVISMVIFGSIGFFSEH-TNLPSFELVFVRCLCATLFLSFCWLVSGQYK 118
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + V + L +W F + + Y + PV+ + LGS+
Sbjct: 119 TEKW----SKREVLQTLACGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSII 174
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--- 195
+E+LN + + + ++ L +++ +G L+ + FA + G
Sbjct: 175 YREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGSGIIWAVFAALFYAFTTLLGKGI 234
Query: 196 ---FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L ++ G L + + + V+ +F ++
Sbjct: 235 QNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDSLR 294
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ + P + IV D +T+ ++ M + L+
Sbjct: 295 FLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRR 346
>gi|229071932|ref|ZP_04205143.1| Permease of the drug/metabolite transporter [Bacillus cereus
F65185]
gi|228711228|gb|EEL63192.1| Permease of the drug/metabolite transporter [Bacillus cereus
F65185]
Length = 303
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 91/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 2 YVIMLLVPLFWGGSFATAEHIITEIPPITAATIRFGLAGFILIGIVF----MKSEWDTSL 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 58 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKEPWSI 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL------------AIAVTWSAYCFARKTIPVGSS 193
I+ L ++ ++++ + +L A+ +K + S
Sbjct: 118 KVGISLTLSLVGVIVVITGGSMHILMSLAFNKGDLLFIAALTCGVLYSLTGKKVMSGVSP 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 178 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGTFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + + IV++ + + + + + K
Sbjct: 238 LGASKASVYLNLTPIVATGISVVLYGAAVTWQQIVGMIIVLMGVYIVTVQSNKDIKK 294
>gi|227508285|ref|ZP_03938334.1| DMT superfamily drug/metabolite transporter [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227192256|gb|EEI72323.1| DMT superfamily drug/metabolite transporter [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 305
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 88/294 (29%), Gaps = 11/294 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + +LWG++ Q L VS ++S R+L S + +
Sbjct: 5 KVRGIVLAVAGPLLWGVSGTTAQALFTHADVSSNWLVSVRMLISGILLVLYGLLTDR-KQ 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L A+ +L FS +A + A+ + F++P I + ++
Sbjct: 64 NLMIWHHWRDALYLLFFSFVGMAASQYTYFKAIDYGNAATATILQFLSPAIIIIYLALST 123
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVGS 192
+ + I++ ++ + +++ H + S + SA + +
Sbjct: 124 RSWPRRIDILSLVMALTGTILLVTHGQLTTLAIPARGFSWGLLTAMSATLYTLLPRKLLG 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + F + F ++
Sbjct: 184 KYGSIPVVGWSMLIGGIAFSIYYRVWTHMPDFNLATYGRIGFVVIFGTMFAYLFFLGSLQ 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+T ++ PL S+ L TI +++ + V T+
Sbjct: 244 FITATTASVLGCFEPLSATFLSIVFLGVQFGIPETIGAILIIGTVFVQSWATMK 297
>gi|168183394|ref|ZP_02618058.1| transporter, EamA family [Clostridium botulinum Bf]
gi|237794028|ref|YP_002861580.1| integral membrane protein [Clostridium botulinum Ba4 str. 657]
gi|182673569|gb|EDT85530.1| transporter, EamA family [Clostridium botulinum Bf]
gi|229260438|gb|ACQ51471.1| integral membrane protein [Clostridium botulinum Ba4 str. 657]
Length = 293
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 100/285 (35%), Gaps = 12/285 (4%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ G L+ + + S ++ R + VF + ++
Sbjct: 9 LLSMLIVGSIGLFVRSI-PFSSAQIALVRGILGCTFVFVFSLMSGQKINGKNI----KAN 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +L+ S L+V+W A + Y+ PV+ + L + LKE L+ L+++
Sbjct: 64 LWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLC 123
Query: 151 ALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ L + + + + + +G + L
Sbjct: 124 IVAALVGLACIAGVSKKAGANDFVGILYGLGSAVLYATVIFLNKCLKDIKGIESSIVQLG 183
Query: 205 IPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ + + S G + P L LI + V+ ++ ++ +V +
Sbjct: 184 VSAISLLAYVLMSEGFKLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVAALS 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P++ I+ + L + + V+ I +++ A +
Sbjct: 244 YIDPVVAILLASIFLHEEMTIVQIIGGILILGATFFNEIYAQKKK 288
>gi|332158849|ref|YP_004424128.1| hypothetical protein PNA2_1209 [Pyrococcus sp. NA2]
gi|331034312|gb|AEC52124.1| hypothetical protein PNA2_1209 [Pyrococcus sp. NA2]
Length = 281
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 91/285 (31%), Gaps = 13/285 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T L + +WG T + ++ L ++ R L + +
Sbjct: 3 ETRKAELILLGLSAIWGTTFPVIKLGIKDYPPLTFVTFRFLIGSILLALLL--------- 53
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
N + + + + +GF + L ++F + V + F+ LK
Sbjct: 54 --RKSINRRQIVPGLLIGLSIFAGFGFQVVGLKYTTASNSAFITSLYMVFTPFVAMFLLK 111
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-FARKTIPVGSSEGFFIE 199
++ + ++A +L + +++ + + + F I G +
Sbjct: 112 SKIAKIDVMALILALFGTYLISGATLKLNYGDMLTTLAAFSFAFQIVLIEYFKDLGLGLA 171
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +F +V++ G + L + +F F + + +
Sbjct: 172 FWQIFWNFIFSLVYSLLFEGLPLPRESSTIFAILYTAVVATAFAFLLQVKYQPKIESHRA 231
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ P+ + S IL + + + +++ A+ + +
Sbjct: 232 AILYSAEPVFGHLFSFMILGEVLKFSGYVGALLILSAIWLEIWRE 276
>gi|253689847|ref|YP_003019037.1| hypothetical protein PC1_3485 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756425|gb|ACT14501.1| protein of unknown function DUF6 transmembrane [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 318
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 92/299 (30%), Gaps = 10/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
GT+ + A I+ G + + V+ R + + G L L
Sbjct: 2 TSQTRGTIEMAIAMIISGTVGWFV-LTSGQPAMTVVFWRCAFGALTMLIVC----GLLGL 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + N K G+ + L +W A + + Y P + V LG++F +
Sbjct: 57 LRRGVINRKQAGIALLGGLALVFNWTLLFGAYAHASIAVATVVYHTQPFMLVGLGAIFFR 116
Query: 141 ERLNHLQIIAALLIILSLLIMT-----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
E L ++ L ++++ + S + + A F +
Sbjct: 117 ETLTLNKLCWLLCAFGGIVLIVSAQTGIDSDDKGYLSGVLMALGAAFFYAVAAAITKKLS 176
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ I L VV + + + + + I++
Sbjct: 177 GIPPHVLVLIQLLVGVVVLAPFAAIPASPTASQWGMLVAIGVIHTGLMSTLLYSAIQKIP 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ VG + + P++ + +D ++ ++++ I + +
Sbjct: 237 TALVGALSFIYPVIAALVDWAAFGHRLDAMQLAGAIAILLSAAGMTFGWRITFSRQGAR 295
>gi|198423207|ref|XP_002128285.1| PREDICTED: similar to acyl-malonyl condensing enzyme [Ciona
intestinalis]
Length = 436
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/321 (9%), Positives = 84/321 (26%), Gaps = 30/321 (9%)
Query: 15 SKENASLPTMMGTLFVFC-AYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
SK + G L A +++G+T ++ + V +E + R + I
Sbjct: 115 SKAKSHDEYTKGILAALLGAGVMYGLTGVFVRLAGDHGVGSIETLLVRSMVQFLLFGSLI 174
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP-VI 130
+ V V A + ++ A + + +
Sbjct: 175 GAHKISYRPPEG------RVWYCVLIAVMYSLATICSFEAFNVIPPGNAIATRGASRTIF 228
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+V L + +E++ A L+ + + ++ S + + +
Sbjct: 229 AVVLTFLITREKIQIRDGAAVLICMSGIAMIIASSLTSNEKDYVVPHGMSDNKVLVNVYG 288
Query: 191 GSSEGFFIEMCVLAIPAL--------------------FYVVWNGFSGGEHFFLGNIPDT 230
L + + F + + +
Sbjct: 289 YILIVVAGITRSLGMITVRKVKGEVHSFSVVLYHSSLTFLISIGLMFVRPFPWPPSAAGI 348
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+++ +S +Y ++ + + ++ I IL+ + +
Sbjct: 349 GYMVAVCATSSVATWSSNYAVQLIHPGLAALAQNADLVVSITLEHTILQVAPQLLEILGA 408
Query: 291 GIVVIAMVVYLLPTVINSGKN 311
+++ + S K
Sbjct: 409 LLILFGVSGLTFLKWRESKKE 429
>gi|138894082|ref|YP_001124535.1| YoaV [Geobacillus thermodenitrificans NG80-2]
gi|196250249|ref|ZP_03148942.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
gi|134265595|gb|ABO65790.1| YoaV [Geobacillus thermodenitrificans NG80-2]
gi|196210138|gb|EDY04904.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
Length = 308
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/291 (8%), Positives = 86/291 (29%), Gaps = 5/291 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +LW + T+ L + + R L + + + + K+ +
Sbjct: 11 IFLLVTIILLWSYGWVLTKMGLSYMGPFTFAALRFLLASLTMIIILFFLKTPRPKGKEWM 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + F+ + + + S+ + ++
Sbjct: 71 ILFIIGLLQTTAMFLFINYGMMFVNVSKSSILIYSMPIWSGILGYLFLHESLNYYKVVSL 130
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ I+ L+ I+ + + + + A++W+ K ++
Sbjct: 131 ILGISGLVSIIGVDFFAVQNKSSIFGECFLLLAAISWAGANIIVKKYFSNHNKIVVSTWQ 190
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ V G+ + + + + +SF F + + + + I
Sbjct: 191 MIFGTIGVVVAAILMEWGQPIQFTTMSMFILIYTGVIASSFCFTCWYVVLTKLDTTVASI 250
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P++ I +L + + I ++ I + + + +
Sbjct: 251 SLLFVPIVAIFLDWLLLNEKMTVNIAIGALLITIGVYLATVAKPKKKSIKR 301
>gi|170721618|ref|YP_001749306.1| transporter DMT superfamily protein [Pseudomonas putida W619]
gi|169759621|gb|ACA72937.1| RarD protein, DMT superfamily transporter [Pseudomonas putida W619]
Length = 295
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 49/293 (16%), Positives = 106/293 (36%), Gaps = 5/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A L+ + YT L + E+ R L +LP + ++ +
Sbjct: 3 KGILCSVMASCLFAVMYFYTSLLTPLDGEEIFGWRTLLTLPCLTLFMLASKDWKRVGDLL 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + +V ++ ++ V F++A L + S YF+ P+ V G + E
Sbjct: 63 ARVRQTPVLLLGMVGTSWLMGVQLWLFLWAPLHGRSLEVSMGYFLLPLAMVLTGRLVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ +A L + G + + F + G
Sbjct: 123 RLSRLQKVAVACAALGVAHELYQHGSFAWETMLVMIGYPIYFVLRRRCRTDHLGGLWCDM 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P Y V G L + + G +++ + + S G+
Sbjct: 183 CLLLPWALYFVIQGPL-SSADLLAHPGLYGLIPLLGAISASALIAYVLASRLLPFSLFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++ ++ + + I + + + + A++V +L + + + +
Sbjct: 242 LSYVEPVLLVGVALLLG-ETIGPDQWLTYLPIWAAVLVLVLEGFRHLLRQRRR 293
>gi|152974503|ref|YP_001374020.1| hypothetical protein Bcer98_0679 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023255|gb|ABS21025.1| protein of unknown function DUF6 transmembrane [Bacillus
cytotoxicus NVH 391-98]
Length = 302
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 94/275 (34%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + L K + +++
Sbjct: 16 WGGNFVVGKSLVDYASPMTLTSLRWIIAIVCLLPIV-----WLKEKKLLPPRAALLPLVL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A+ F AL + + ++FLKE++N LQI++ +L
Sbjct: 71 MGITGVALFNIFQFLALENTSATNVGLISTLNAISIALFSALFLKEKINMLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+L++ +L IA ++ + + + I
Sbjct: 131 FGVLLVLSKGDFSILFSLRFNSGDVWMIAAVCIWGIYSVCSKWATKTISPMLATFYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + +++ G+++ +T GI
Sbjct: 191 GVILLLPFHIRTFTVTKIDASFVTSLLYTGLISTVVCMVLWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + V+ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEALTWVQVLGTAIVVTGCYLFS 285
>gi|88855220|ref|ZP_01129885.1| hypothetical protein A20C1_05041 [marine actinobacterium PHSC20C1]
gi|88815748|gb|EAR25605.1| hypothetical protein A20C1_05041 [marine actinobacterium PHSC20C1]
Length = 347
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/299 (8%), Positives = 78/299 (26%), Gaps = 21/299 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
T G L A +G++ + + S ++ RVL + +
Sbjct: 2 TRSSTTFGMLIAVVAAASFGLSGALIKPVLEAGWSPAAAVTLRVLIGGSVLAPFAIVALK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G + + + + +A + A+ + ++ P++ V
Sbjct: 62 GRWIALWYARTRILLM----AIIGVAATQLVYFAAVERIPVGIAILLEYMAPLLLVAFAW 117
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + + ++ +++ + L+++ G L + ++ V ++
Sbjct: 118 ITTRRMPKVVVLVGSVVALGGLILVVSPEGSGGLDPIGIIFGASAAVGAAVYYVVAARSS 177
Query: 197 FIEMCVLAIPALFYVVW---------------NGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
V A + LI +
Sbjct: 178 EGLPAVALAAAGLLIGGILLGLVGLVGLVPFDMPMVEVSVLGFMAPWWVPLLIVGIVATG 237
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + + + + +L + + + I +++ +
Sbjct: 238 IAYSTSIMASEMLGSRLASFVGLLEVVTAALYAWILLGENLSVAQFIGGALILAGIAFV 296
>gi|116692410|ref|YP_837943.1| hypothetical protein Bcen2424_4316 [Burkholderia cenocepacia
HI2424]
gi|116650410|gb|ABK11050.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia HI2424]
Length = 310
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 84/284 (29%), Gaps = 20/284 (7%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ WG T + + L + R + + GGL L +
Sbjct: 25 LVALFWGGTFIAGRILAATMSATSAATGRFAIAALLLVVLTWQVEGGLPTLSG----RQI 80
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
V AT + ++ F AL T+ + PV + L SV ++ERL+ +
Sbjct: 81 VTTFGLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSVVVRERLSLSRWAG 140
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-------------- 196
+ + LI+ + + T+ A + +
Sbjct: 141 IAVALCGALIVISRGDWLRVLTDLGNTFGAGERFMLCAVLSWAAYTVIGRRALDGLSPLA 200
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L + L L + F +S GI+
Sbjct: 201 ATTYAALWGLALLLVTHLFDATATGGTPLTWQAVASMLYLGAVGTVIAFVWYSQGIRLLG 260
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ SV +L +P+ +V+ + +
Sbjct: 261 PARAAVFTNLVPVFGVLLSVVLLGEPLSPSMLAGGALVIAGVAL 304
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 31/131 (23%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + F I + AI AL VV G L
Sbjct: 25 LVALFWGGTFIAGRILAATMSATSAATGRFAIAALLLVVLTWQVEGGLPTLSGRQIVTTF 84
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F + R + P+ V ++++ + R +
Sbjct: 85 GLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSVVVRERLSLSRWAGIAVA 144
Query: 294 VIAMVVYLLPT 304
+ ++ +
Sbjct: 145 LCGALIVISRG 155
>gi|317403460|gb|EFV83969.1| hypothetical protein HMPREF0005_01926 [Achromobacter xylosoxidans
C54]
Length = 296
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 94/281 (33%), Gaps = 8/281 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ ++ A +L+G+T ++ + + Q S + R ++++ + F+
Sbjct: 1 MTRHRALTYIHIAAVLFGLTGVFGELI-QASAAVITLGRAVFAVISLGL----FARMRRR 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
P + +LV + +LA HW F ++ + + + P + +
Sbjct: 56 PLLGALTPAQLFVLVIAGALLAAHWVTFFISVKVGGIAIATLGFASFPAFITLFEGLIFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG---IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER+ + + L+ L+++T + LA + S+ G
Sbjct: 116 ERVRLAEWLLLGLVTAGLVLVTPSFDLADQGTIGLAWGLLSGLTFALLALSNRRSASGMD 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ +V F+ G+ L + + +F + R
Sbjct: 176 PMQVACWQNLVVALVMLPFAVGQLPALPAMDWFWLALLGVFCTGLSHFLFVSSLTRLNAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G++ P+ I + + Q ++V A+V
Sbjct: 236 SAGLVIALEPVYAIAFAWLLFSQQPTVRMMAGAALIVAAIV 276
>gi|269796917|ref|YP_003316372.1| DMT(drug/metabolite transporter) superfamily permease [Sanguibacter
keddieii DSM 10542]
gi|269099102|gb|ACZ23538.1| DMT(drug/metabolite transporter) superfamily permease [Sanguibacter
keddieii DSM 10542]
Length = 336
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 90/294 (30%), Gaps = 20/294 (6%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG + L + + V ++ R L + + L + L
Sbjct: 13 LLLLGVAAVWGASFLAAKDLAAETGVPAAVALRFLVAAVATAVLCLARREPLPRARGLL- 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V A G + + + V++ L + + L
Sbjct: 72 ------VAVVLGCTQAAVIGLETWGVHLTTATNAGLLISLALVMTPVLEGIASRSWLPRA 125
Query: 147 QIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+AA+ ++ + ++ G +++ A A T +
Sbjct: 126 YFVAAVAAVVGVALLVSEGGLRQPTAGDGLVVAAAAVRALHVTASAHLTRGRTEGSSSVV 185
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++ A+F V+ L + L L + F F + + ++R S
Sbjct: 186 LVQMVVCAAVFTVMAGPGLPSAAARLDTLGWAGVLFLGLLCSVFAFVVQLWAVRRTSASR 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
I+ T P+ ++ V + + I + +++ A +++
Sbjct: 246 ASILMGTEPVWALLVGVVVAGEVIGPLGACGAALIIAA----SYAGQAVERRHR 295
>gi|254464741|ref|ZP_05078152.1| possible transporter, RhaT family, DMT superfamily [Rhodobacterales
bacterium Y4I]
gi|206685649|gb|EDZ46131.1| possible transporter, RhaT family, DMT superfamily [Rhodobacterales
bacterium Y4I]
Length = 284
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 94/290 (32%), Gaps = 9/290 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ G+L + A + + ++ + + V +++ L G+ +++ + +
Sbjct: 1 MDTLRGSLLMVLAMAAFALEDMFIKSAAASLPVGQILI------LFGLGGMVLFAAMARA 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + + A+ S TP++ VF
Sbjct: 55 QGHAPWHPGFGTRPMLLRSVSEVAGRLCYTLAIALTPLSSASAILQATPLVVAAGAVVFF 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI- 198
E + + +A L +L++ ++ FA + + ++
Sbjct: 115 GETVGWRRWLAIGLGFAGVLLILRPGLSGFEPASLFAVAGTLGFAGRDLATRAAPRDMSN 174
Query: 199 -EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L L + L + ++ + S ++ ++S
Sbjct: 175 NQLGFLGFSMLVVAGAIALGWTGGAVWPAPRNWLDIAAATVIGVIAYNALSGAMRAGEIS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ YT + +V V + + D + I ++V++ V LL +
Sbjct: 235 VIAPFRYTRLVFAMVLGVLVFGERPDALTLIGSAVIVVSGVFTLLRSRKA 284
>gi|326388625|ref|ZP_08210218.1| permease [Novosphingobium nitrogenifigens DSM 19370]
gi|326206876|gb|EGD57700.1| permease [Novosphingobium nitrogenifigens DSM 19370]
Length = 315
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 84/282 (29%), Gaps = 6/282 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L V + +LW L+ + + + ++ R L++ + + G ++
Sbjct: 13 AHAHRRGILMVAASAVLWSTAGLFVR-MATLDTATLVLWRSLFAALTLGGMALVRRGPVA 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + S V ++++L Y P I+ +G V++
Sbjct: 72 FVECFRDLRTTAIFVGTS----VVSSTSYVFSLRLTSVANVMTVYAALPFIATGIGYVWI 127
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + ++A + + M S IA + ++
Sbjct: 128 GEPVTRRFLLAGTIAAGGIAGMAGGSAGMGDLAGIAAALVMTAGFAIQLVAIRRHP-GVD 186
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + V G + + L + + G +R
Sbjct: 187 VLALNACSAAACVPVVLPFASWAVPGAVSLGAAALYGVLTTGLAYVLAMEGGRRVSPGEA 246
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G + +L + + + +V+ A+ YL
Sbjct: 247 GFISMLDVVLGPLWVWLAFSERPGMAVLLGGAVVLGAVGWYL 288
>gi|322516193|ref|ZP_08069126.1| DMT superfamily drug/metabolite transporter [Streptococcus
vestibularis ATCC 49124]
gi|322125369|gb|EFX96724.1| DMT superfamily drug/metabolite transporter [Streptococcus
vestibularis ATCC 49124]
Length = 305
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 101/301 (33%), Gaps = 8/301 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV-LEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G+L V A I WG + + Q+L V + +++ L + A V+F
Sbjct: 2 SKQLKGSLMVLAAGIAWGFSGVSGQYLMAHGVNVNLLTSLRLLLSGILLTASVFFRQRDK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L++ V + +F+ L ++ ++ A+ + +VTPVI +
Sbjct: 62 LVQAIKDRKTLVSIALFALFGLVLNQYAYLSAIQYTNAGTATVLQYVTPVIILAFVCAKY 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGS 192
+ +++A +L I+ + H L + + +
Sbjct: 122 RRFPTAAELVAIILAIVGTFTIATHGQIRELAITPLGLFWGLFSAVTYAIYILLPAKAIE 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G I + + + + L + F + +F G
Sbjct: 182 KWGSLIVIGLGLLIGGLIFPIVIQAWKYKLSLTGGNLLALFGLIFIGTVFAYTVFLKGTT 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ P+ ++ +V I+ + + ++V+A+++ L ++ K +
Sbjct: 242 MVGAVKGSLLASVEPIASVILTVLIMGDRFFAIDVVGMFLIVLAVIIISLKNLVTLKKQE 301
Query: 313 T 313
Sbjct: 302 K 302
>gi|258538759|ref|YP_003173258.1| carboxylate/amino acid/amine transporter [Lactobacillus rhamnosus
Lc 705]
gi|257150435|emb|CAR89407.1| Carboxylate/amino acid/amine transporter [Lactobacillus rhamnosus
Lc 705]
Length = 316
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/305 (11%), Positives = 89/305 (29%), Gaps = 10/305 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N + + G +F I WG + ++TQ L V L ++ R+ ++ +
Sbjct: 2 NQNDQKLKGVIFAVVGAIFWGASGIFTQMLFTNAGVRPLWLVGIRLFFAGL-LLVIWSSL 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L A+ +++F+ + + A+ + F+ PV +
Sbjct: 61 KDLRQLGTIWKNRHDAMLLILFAFLGMVPSQLTYFLAISAGNAATATILQFLGPVFILLY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ + ++ L ++ ++ + LSLA A +
Sbjct: 121 VAFATRQMPRRIDFVSITLALIGTYLLVTRGRLTSLSLAPAAVFWGIMAGVSQALYTLLP 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY----- 249
+ + ++ + L P + +F
Sbjct: 181 RTLLAKYDARAVTGWSMLLGSLPFLPQYVLRRNPVLTLPNLGAIAFVVIFGTMFAYLLVL 240
Query: 250 -GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ G++ PL +V L + ++V+ ++ LP
Sbjct: 241 GSLHYISPVATGMLSAFEPLTATTLAVTRLHIAFGPAEWLGGFLIVLNTLLQALPFNKLQ 300
Query: 309 GKNKT 313
+
Sbjct: 301 HVQRR 305
>gi|228991829|ref|ZP_04151766.1| Transporter, EamA [Bacillus pseudomycoides DSM 12442]
gi|228767910|gb|EEM16536.1| Transporter, EamA [Bacillus pseudomycoides DSM 12442]
Length = 309
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 94/300 (31%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + + L
Sbjct: 6 RMKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFFMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +LV ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LLVVGIVGTTLYQTLFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +LL ++ L + A +
Sbjct: 121 KQERFSMKIQIGSLLSFSGAALVLLTGHTNQSTYEYAWLGNLIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIF 247
+ + I + VV+ F+ + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLTWPTDTLSWGSLGYSILFATVFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+T++ + ++ I + V V
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGERINTMQLLGGLVIFIGLYVVKKGAVKK 300
>gi|229175200|ref|ZP_04302716.1| Transporter, EamA [Bacillus cereus MM3]
gi|228608336|gb|EEK65642.1| Transporter, EamA [Bacillus cereus MM3]
Length = 299
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 94/294 (31%), Gaps = 12/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + + R+L+ + L + K +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTLHPVLLTTLRLLFINLFFLAYAIMCKKELYIEKKEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KSVLLI-----GIIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + S + + +I + G F
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFFFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFFITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ +++ +++ + ST
Sbjct: 180 FSSVFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLVWNNQLRKVQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P + +V IL++ + ++ I +V + + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYIATFGYGKKSKGQKV 293
>gi|72161173|ref|YP_288830.1| hypothetical protein Tfu_0769 [Thermobifida fusca YX]
gi|71914905|gb|AAZ54807.1| membrane protein, putative [Thermobifida fusca YX]
Length = 306
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 95/297 (31%), Gaps = 16/297 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWG---ITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI 71
S ++LP G L + A +LWG + Q L + + +R+L A+
Sbjct: 6 SSPPSALPRWRGPLLLALAGVLWGTGGFAGAFLQQLTGIHPIATACYRLLAGGVLAIVAL 65
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS-YFVTPVI 130
G L+ ++P + + + +LA + A+ L + PV
Sbjct: 66 ----GVSGQLRGLPRSPAVLRRVAAAGVLLAAFQACYFAAIAVSSVSLATLIAIGSVPVF 121
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI-- 188
+V + + A +L L++++ G + +A+ A
Sbjct: 122 VTCAAAVLERRLPRPTLLAAVCCGVLGLVLLSGDPGGDVPPGRVALGVGCALGAGAAFAA 181
Query: 189 ----PVGSSEGFFI--EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
G + + +V + G F + L +
Sbjct: 182 LTLVNRRPVPGLDPLRVTALGCLLGGTLLVPLAAATGMTFTPTLPAVGVLLYLGLAPTAL 241
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + G++ + PL V S+ +L + + T+ ++ A+++
Sbjct: 242 AYLAYFGGMRTTPAPVAALAVILEPLTATVLSLLLLGEVLTPTGTVGAVLLFGAILL 298
>gi|317121424|ref|YP_004101427.1| hypothetical protein Tmar_0579 [Thermaerobacter marianensis DSM
12885]
gi|315591404|gb|ADU50700.1| protein of unknown function DUF6 transmembrane [Thermaerobacter
marianensis DSM 12885]
Length = 318
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/277 (12%), Positives = 81/277 (29%), Gaps = 17/277 (6%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
W + + +V +++ R + + + + GGL + + +++
Sbjct: 13 WAGNWTIAKELVRRVHPADLVLVRWALAAVVLAPIVYWREGGLPRPQG----RDWLAVML 68
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A + A + Y +P ++ L L ER+ + + A L +
Sbjct: 69 CGLTGMAGYNTLQYIAQQQTTNINGTLIYTSSPALTFLLAVPVLHERVTPRRAVGAALSL 128
Query: 156 LSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ G L+ A A R S +
Sbjct: 129 AGTAWILSGGSLELLRSWRFNPGDVLMVAASASWAVYTVVTRVGTRRLSPLALTLYAAAA 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ GE + L L + ++ + ++ G++R I
Sbjct: 189 GTVMTALGRGWSLARGEAWSLSLHDAWAVLYIGVVSSAVAYLFWNEGVRRIGAGPASIFA 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
P+ S+ +L + + + V+ + +
Sbjct: 249 NLLPVYTAALSIALLGEQLTAAHVVGGLAVLGGVYLV 285
>gi|292654019|ref|YP_003533917.1| Integral membrane protein domain protein [Haloferax volcanii DS2]
gi|291369675|gb|ADE01903.1| Integral membrane protein domain protein [Haloferax volcanii DS2]
Length = 295
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 83/285 (29%), Gaps = 23/285 (8%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + +++ + L + R+ ++ A+ + S + +
Sbjct: 17 IWGGMYVVSKWGFRSIPPLTLAFLRIALGAGVLYIAVRATTPARSFDRSEWRR------F 70
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
A L S +TPV + LG L E L + + L
Sbjct: 71 AALAVWLTAALSTQFVGTDLTNASQGSLLTVLTPVFMLVLGVTALGEHLTRRKSLGTALA 130
Query: 155 ILSLLIMTLHSGIPL----------------LSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ L++ A + A R+ + ++ +
Sbjct: 131 TVGTLVVLSGQYDAAALAGGSVSGVALLLFSSLCFAAFSVFAKPLIRRYSALETATYATV 190
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L + + + L L + + + G++ A S
Sbjct: 191 LSVPLFGALVPVEFYLDPAAFGSISPSLPVVGAVLYLGLLSTAAAWYCWYKGMEYADASA 250
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
VG+ + P++ I+ L++P+ ++ + +++
Sbjct: 251 VGVFFFAQPVVGILLGAVFLREPVGLELLGGGAVLAVGVLLVNTD 295
>gi|237744720|ref|ZP_04575201.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|229431949|gb|EEO42161.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
Length = 282
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 97/280 (34%), Gaps = 13/280 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSV-LEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+++F A I +G+T + T+ S L +IS R L + + K
Sbjct: 9 IYMFIATIFFGMTYVLTKICLNYSTELHIISFRFLIAFVISLIFL--------QRKIFPL 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K + + + +L + + + SF ++ + F +F KE+
Sbjct: 61 KIKEILYSLILSVLLFMVFITMTIGVKYTTATNASFLISLSVIFIPFFSWIFNKEKPKKS 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I ++ ++ ++++TL + I ++ V ++ + +
Sbjct: 121 IFIVLIIALIGIMLLTLDKNLEFHIGDILCLICSLLFSFHVLITERFVKNNNPITLGVLQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A+ + +I + + I + K+ + +G++
Sbjct: 181 FGGVAILSFLVQYPIEKFTLPKNEKFWISLMILSVFCTALAYIIQTVSQKKLSSTLIGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+ + FIL + + + + +++I+++ +
Sbjct: 241 LSLEPIFSGIFGYFILNEYLSPQQYMGAFLLLISIIYVTV 280
>gi|261368630|ref|ZP_05981513.1| putative membrane protein [Subdoligranulum variabile DSM 15176]
gi|282569360|gb|EFB74895.1| putative membrane protein [Subdoligranulum variabile DSM 15176]
Length = 301
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/299 (9%), Positives = 75/299 (25%), Gaps = 10/299 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFS--- 75
+ + TL + A ++WG + + ++ R + + +
Sbjct: 3 NKKQLRNTLMLVVAALIWGTAFVAQSVGSGYMGPYTFLASRSWLACAFLLGLMGVRRAGQ 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ K + + I + + V+ V +
Sbjct: 63 RRQGKRLPFWLHGKTLAIGGGLCGIALFAASAAQQMGIGTTSTAKAGFMTALYVVLVPVC 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL------LSLAIAVTWSAYCFARKTIP 189
+FL R ++ ++ L ++ L L L +
Sbjct: 123 GIFLGSRPGVKLWACVVVSVVGLYLLCLAGRDSLSLTGGEWQLLLCAFLFTLQILLVNHF 182
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+G + ++ V+ L + + + +
Sbjct: 183 SPQLDGIQLSFAQFFTVSVLSTVFMFVFEQPTPEQFAGAAVSVLYCGIMSSGVAYTLQIV 242
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G + + + + ++ IL + + G++ A+V LP
Sbjct: 243 GQQELDPTIASLAMCLESVFSALAGWIILGETLTGTELAGCGLMFAAIVASQLPDPKRR 301
>gi|306520063|ref|ZP_07406410.1| hypothetical protein CdifQ_08562 [Clostridium difficile QCD-32g58]
Length = 304
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 101/301 (33%), Gaps = 15/301 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + I+WG + TQF ++ L++I+ R + +
Sbjct: 1 MKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFF------ 54
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K + L + + L+ +F VI F+G +
Sbjct: 55 -KQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVPFIGFIL 113
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSE 194
+ +L+ + II++L+ ++ + I++L + + I A+ + +
Sbjct: 114 YRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSEFAKDNN 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + L VV F+G + + F + KR
Sbjct: 174 PMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQTICQKRV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ I+ T + + S+ ILK+ I I ++ + + T ++ K+K
Sbjct: 234 DGTRTAIILSTEAVFGTIFSIIILKELITAKLIIGSILIF--VAIITAETKLSFLKSKKV 291
Query: 315 K 315
K
Sbjct: 292 K 292
>gi|94968464|ref|YP_590512.1| DMT family permease [Candidatus Koribacter versatilis Ellin345]
gi|94550514|gb|ABF40438.1| Putative 10 TMS drug/metabolite exporter, DME family, DMT
superfamily [Candidatus Koribacter versatilis Ellin345]
Length = 301
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 91/291 (31%), Gaps = 20/291 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ + + +WG T + + L V+ L + R+ + + +
Sbjct: 2 SRSLKAHILLIAVTFVWGSTFVLIKAALADVTPLLFNAVRMTLAGLALGLVYWKALRKM- 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
N + A ++ + F L ++ ++ V+ +
Sbjct: 61 -------NRAEFIDGMLVALMMYFGYEFQTSGLKLTTPSKSALLTGMSVVLVPLILHFGW 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----------AIAVTWSAYCFARKTI 188
++ ++ I L+ + L ++T+ +G A+
Sbjct: 114 RKHVSKWTIFGVLIACVGLFLLTVPAGTSRGFSLTEMNLGDLLSMGCAVCFAFQIILVGR 173
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
I +A A+ + H + L+ L + F + +
Sbjct: 174 ASERHGFEPIAFLQVAGAAVLMFATVPIAEHAHVTWSSTVIWAILVTGLLGTAAAFTVQA 233
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + ++ P+ +S IL + +++ ++ ++++ +V+
Sbjct: 234 WAQQFMPATNTALIFLLEPVFAWATSFVILHERLNSRSSLGAVLILVGVVL 284
>gi|2997760|gb|AAC08598.1| chloramphenicol-sensitive protein [Pseudomonas aeruginosa PAO1]
Length = 299
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 60/293 (20%), Positives = 110/293 (37%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A +L+ P Y LE + L+V++HRV+WS+P VF +V +L
Sbjct: 6 QGVLLSLAASVLFVTLPGYVHLLEPLDSLQVVAHRVVWSIPMVFLLVVATRQLPTLRAAW 65
Query: 85 LK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + +A ++ + WG FI+A L + S YF+ P+ V +G VF E
Sbjct: 66 CRLFAEPWLLACFPLTAAMMLLQWGIFIWAPLAGKTLELSLGYFLLPLAMVLVGRVFYGE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L LQ IA + +L +++ + +G
Sbjct: 126 LLMPLQAIAVACSLAGVLHEFW-LTRAFSWVSLVTALGYPPYFMLRRRMGVDALSGFVFE 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L + L F L L GL+++ F + + GI
Sbjct: 185 MLFLLPLALAALYWLGDESQAFREAPRLWLLLPMLGLISALAFGAMMASSRLLPMGLFGI 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ + +V L + + + + +A+++ + +
Sbjct: 245 LSYVEPVLLFLVAVLFLGEAFRPEQLWTYAPIWLAVLLTGWDSARLLRTQAQR 297
>gi|19704373|ref|NP_603935.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19714627|gb|AAL95234.1| Transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 303
Score = 69.6 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L +F A +WG + ++++ R + ++ + ++
Sbjct: 2 MNKKRYFGDLMLFLAAFIWGTAFVAQVTGMDRIGPFTFNMARSIIAIICLGAYLIITKSK 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L V + + L T F +I FL +
Sbjct: 62 LPKDIGVLLQGGLVC-----GFFIFMGTSLQQIGLQYTTAGKTGFITSFYILIIPFLTMI 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
FLK +++ L I+ ++ + L ++ + + G ++ L
Sbjct: 117 FLKHKIDLLTWISIIIGFIGLYLLAIPNLSDFTINRGDFIVFLGSFCWGGHILIIDYYSK 176
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S V+ + + L + + +
Sbjct: 177 KVSPVQLSFLQFVMLTILSGICALLFENETATMNNIFLSWKSIAYAGFLSSGIAYTLQMV 236
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K ++ + ++ +L + + + + IV +A++ +P I
Sbjct: 237 GQKYTNPIIASLILSLEAVFAALAGYIMLDEVMTSREFLGCSIVFLAIIFSQIPKDIFKK 296
Query: 310 K 310
K
Sbjct: 297 K 297
>gi|323702448|ref|ZP_08114112.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
gi|323532587|gb|EGB22462.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
Length = 280
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/278 (9%), Positives = 80/278 (28%), Gaps = 14/278 (5%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
+ S L + + R + S+ + + + + + + + T +
Sbjct: 6 LVGHASPLTLTNMRWIISILCLIPIVWV-----REKRLLPPHQAILPLFLMGLTGVVFFN 60
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
F AL + PV L E+++ Q++ L+ ++ +L + H
Sbjct: 61 IFMFLALERTSADNVGLLSALNPVSIAVASYFLLHEKISARQVLGMLISLIGVLAVISHG 120
Query: 166 GIP---------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF 216
+A ++ ++ ++
Sbjct: 121 DWHRIAKFHLNTGDLFMLAAVVMWGLYSVTGKKAMQYVSPYMSTLWAGAFGFMALLPFNL 180
Query: 217 SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVF 276
L ++ GI++ + G+ P+ + + F
Sbjct: 181 PSFTITGPDKAFWMATLYTSIGATVAAMVFWNIGIQKIGGTRSGMFLNFNPIFTAILAYF 240
Query: 277 ILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+L + + + + +V+ + ++ + + ++K
Sbjct: 241 LLGEQMSPAQVVGTVLVIAGVYLFTTGSANRPIRLRSK 278
>gi|309378361|emb|CBX23007.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 300
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 91/298 (30%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDVLGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + A + + ++ + + + ++L G G+ + K
Sbjct: 175 LAGEPGWRVVFYLSATGVAMSSVWATLTGWHMLSWQSAVYLSGIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEQLFWQEILGMCIIILSGILSSIRPIAFKQR 292
>gi|196034483|ref|ZP_03101892.1| putative membrane protein [Bacillus cereus W]
gi|195993025|gb|EDX56984.1| putative membrane protein [Bacillus cereus W]
Length = 309
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 90/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + L ++ + + R + + + S +L
Sbjct: 8 YVIMLFVPLFWGGSFATAEHVLTEIPPITAATIRFGLAGCILIGIVF----MKSEWNTSL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWST 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGMSLILSLIGVIVVITSGSMDTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 244 LGASKASMYLNLTPIVATCISVVLYGAAVTWKQIAGMIIVLIGVYIATVQSNKDIKK 300
>gi|158338981|ref|YP_001520158.1| carboxylate/amino acid/amine transporter [Acaryochloris marina
MBIC11017]
gi|158309222|gb|ABW30839.1| carboxylate/amino acid/amine transporter, putative [Acaryochloris
marina MBIC11017]
Length = 291
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 93/288 (32%), Gaps = 16/288 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
NA + L A I WG T + T L L V + R L + ++
Sbjct: 2 NAPSARLFNILLTALAPIAWGTTYVITTELLPPGHPLLVAALRTLPMGLILILSL----- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + ML+ + + A G + + + + P++ V
Sbjct: 57 -----RQLPQGIWWGRMLILGGLNIGLFQALLFVAAYRLPGGVAATAGSIQPLLVVLFAW 111
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L E+ + I+AA+ + + ++ L + +++ +
Sbjct: 112 QLLGEKPSRRSILAAITGFMGVGLLVLGPEAQLDSVGIVAAIASAATMGLGTVLVKRWQS 171
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
L + L + G + FL + + ++ GI
Sbjct: 172 PVSLMVFTAWQLTVGGLMLLPIALIVEGPFEQISGTNLLGFLYLGLIGTGLAYALWFRGI 231
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + + +P++ + L+Q + +++ + IV+ ++ +
Sbjct: 232 RKLNATAASYLGLLSPIVATLLGYLFLQQTLTSLQLLGVVIVLSSIFL 279
>gi|149203052|ref|ZP_01880023.1| hypothetical protein RTM1035_19956 [Roseovarius sp. TM1035]
gi|149143598|gb|EDM31634.1| hypothetical protein RTM1035_19956 [Roseovarius sp. TM1035]
Length = 323
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 98/314 (31%), Gaps = 25/314 (7%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIV 72
+ ++G + A + + + + +FL L +V+ R L + ++
Sbjct: 2 TTAATIQRSNLIGAGYALAAVLCFSLNDVGIKFLSDSYALHQVVFIRALVGMAAFVAFVM 61
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F+GGL+L++ M + + L +FV+P++
Sbjct: 62 PFAGGLALIRTR-----RPKMHLLRGLCVVSANTCLFLGLAAMPIADAVAVFFVSPLVIT 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+FL+E + + A + L +L++ ++ +A+ +A I
Sbjct: 117 VFSVLFLRESVGTRRWAAIAVGFLGVLVIVKPGTAAFQLASLLPIAAAFLYAVMHILARK 176
Query: 193 SEGFFIEMCVLAIPALFYV-------------------VWNGFSGGEHFFLGNIPDTLFL 233
G + L ++ + + D L
Sbjct: 177 IGGTESAPTMAFYIQLTFIIASTIIGLSFGDGRFAGMGHPSLEFLFRAWVWPAPGDWPIL 236
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
I G+ S + ++ + EY A + I+ V + D I ++
Sbjct: 237 IMLGISGMLGGLFISQAYRLSEAAFAAPFEYVAMPMAIMWGVTVFGTWPDATAWIGIALI 296
Query: 294 VIAMVVYLLPTVIN 307
V + + L +
Sbjct: 297 VGSGLYLLWRESVK 310
>gi|118475737|ref|YP_892892.1| transporter [Campylobacter fetus subsp. fetus 82-40]
gi|118414963|gb|ABK83383.1| transporter [Campylobacter fetus subsp. fetus 82-40]
Length = 296
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/293 (9%), Positives = 77/293 (26%), Gaps = 11/293 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G +LWG + Q+L + V ++ +R+L S + ++
Sbjct: 2 KNNSYIFGVFITLIGGVLWGFSGACGQYLFEQKGVGSDWLVPYRLLISGIILL-SVYLIK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +LV++ L + + Y++ + + + PV + +
Sbjct: 61 SPKIIFLPFKNPKNIPQILVYAIIGLMMTQYSYFYSIELSNAAVATVIQYTAPVFILIVV 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
K +++A I + + H L +
Sbjct: 121 CFMDKRLPYFKELVALGFAIFGVFFLATHGDFTTLVISQKALVFCFISALCVVVYNIVPK 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + I + F +
Sbjct: 181 RLNKDFPISLVLGWGLIIGGTILSLYMKVWTLDGVNDLGGYLAVGGVILFGTVLAFSFYM 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G+ S ++ P+ + L + F ++++ + +
Sbjct: 241 TGVGIIGASRASLIAAIEPVAAAFFTSVWLGVRFVFFDYLGFILIMLCVFILS 293
>gi|325128804|gb|EGC51664.1| integral membrane protein [Neisseria meningitidis N1568]
Length = 284
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/276 (10%), Positives = 79/276 (28%), Gaps = 3/276 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + +++ + ++ R+L + A G + +
Sbjct: 1 MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHVGKIPREEWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + + V + A + L +
Sbjct: 61 LLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARAYHWICGA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L++ G L + + A + + F + +
Sbjct: 121 AAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIGAPAFTSVSIA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + L + + +++ G+ R + G++
Sbjct: 181 AASLMCLPFSLALAQSYTVDWSVGMVLSLLYLSLGCGWYAYWLWNKGMSRVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P++ ++ +V IL + + V + +V+ A +V
Sbjct: 241 SLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV 276
>gi|326315868|ref|YP_004233540.1| hypothetical protein Acav_1051 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323372704|gb|ADX44973.1| protein of unknown function DUF6 transmembrane [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 326
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 84/287 (29%), Gaps = 15/287 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + I + + + V + ++ +R+L++LP + S G L
Sbjct: 40 GLVLALVGAIAFSGKAIIVKLAYRYGVDAVTLLMYRMLFALPIFAVMAWWASRGKPPL-- 97
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
G++ T + L L ++ P + V LG + +
Sbjct: 98 --SRRDWAGIVGLGVTGYYLASFLDFAGLAYITASLERLILYLNPTLVVVLGWLLYGRGI 155
Query: 144 NHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q++ + ++++ H + LL A +++ Y +
Sbjct: 156 RRGQVLGMAISYCGVVLVFGHEASLQGKDVAWGVLLVFLSAASYAVYLVYSGEMVRRVGS 215
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + L + L + + I+R
Sbjct: 216 LRLVGLATTVACVCCIAQFAALRPLSAAVVAPEVLWLSVCNAVLCTAVPVLLVMMAIERI 275
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
PL I+ V++L +P +V+ + V+
Sbjct: 276 GAGAAAQAGMIGPLSTILMGVWLLGEPFTLWVAAGTVLVMAGIFVFT 322
>gi|126642252|ref|YP_001085236.1| membrane protein putative [Acinetobacter baumannii ATCC 17978]
Length = 278
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 92/269 (34%), Gaps = 9/269 (3%)
Query: 34 YILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
+L G L+ S + ++ R L S + ++ + K + +
Sbjct: 1 MLLSGSIGLFV-IKSGQSPVNIVFFRCLISALCLIPICYFYGHFRKV----YFGKKELFL 55
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
+V S ++ +W A L + Y V P + +FLG++ E+LN ++ ++
Sbjct: 56 MVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLGALVFHEKLNKNDVLWTIV 115
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF---- 209
+ L+++ + S + L I +
Sbjct: 116 AFIGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITKKLSNTPPLLIVFIQTLSG 175
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ F + L +F++ + IK+ L+ + I+ + P+
Sbjct: 176 AIAMTPFMSVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIKKIPLNNIAILSFIYPIS 235
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
IV F + + + + G++++ ++
Sbjct: 236 TIVIDYFFFDHVLTSTQVLGAGLILLGVL 264
>gi|254459907|ref|ZP_05073323.1| possible transporter, RhaT family, DMT superfamily [Rhodobacterales
bacterium HTCC2083]
gi|206676496|gb|EDZ40983.1| possible transporter, RhaT family, DMT superfamily
[Rhodobacteraceae bacterium HTCC2083]
Length = 302
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/301 (11%), Positives = 96/301 (31%), Gaps = 8/301 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
++ G LF+ C+ + L+ + + V + +++ R + + ++
Sbjct: 1 MTLFANLSDNAKGALFMMCSMAAFTFNDLFIKAIGTDVPLSQLLLLRGILATTLIYLLAR 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
Y K K ++V + FF+ ALL + P+
Sbjct: 61 YLK-----ALAWPKRAKDRWLIVLRSAAEVAAAYFFLTALLHMPFANVTAILQTLPLTVT 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
++ KE + +++A ++ ++++ +I V + C + +
Sbjct: 116 LAAALVFKEAVGWRRMLAIVIGFCGMMLIVRPGTDGFTIHSIYVLIAVLCVTVRDLAARR 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV--FCIFSYG 250
+ V + ++F + G ++ + + +
Sbjct: 176 LSKDVPSLTVTLVGSIFVTGFGGIGALATGEWSDMTSVQIAMLVASALFVIGGYVFSVMV 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ ++ YTA L ++ + +T+ + G++V + L +
Sbjct: 236 MRVGEVGFTSPFRYTAMLWALLLGYVFFGEWPETLTFVGAGLIVATGIFTLYREARVKRR 295
Query: 311 N 311
Sbjct: 296 Q 296
>gi|121533999|ref|ZP_01665825.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
gi|121307510|gb|EAX48426.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
Length = 297
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 84/287 (29%), Gaps = 16/287 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +LWG + ++ + ++ + R + Y G K
Sbjct: 11 YTLLTMTAVLWGGNAVAAKYTVGELPPVTTAFLRFAAVSVILIVLAFYIEG----KKCLP 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + G++ T +A+ + S V PV + L ++ L ERL
Sbjct: 67 RREQLPGIIAMGLTGIALFNFLIYSGVKLSTATNMSLLNAVGPVTTACLAALLLNERLTL 126
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q+ + ++I+ ++ V+W+ Y + + S
Sbjct: 127 RQLAGVAISFFGVIIVVAKGSLAVLTGLSFNIGDIMLALAQVSWAVYSVIGRKVMRTMSA 186
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + +++ L F +++G+
Sbjct: 187 LAATAWASVVGSLILFIIARMEGFNGTIALSFFGWVSMAYMVLGSGCLAFFWWNHGVSVL 246
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I P+ + +V ++ + + + +++ + +
Sbjct: 247 GPHRAAIFMNIVPVAGTILAVLLVNEAVSWQQIAGAMLIIAGVYLTT 293
Score = 36.0 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 10/131 (7%), Positives = 35/131 (26%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ VG A ++ +V + G+ +
Sbjct: 16 MTAVLWGGNAVAAKYTVGELPPVTTAFLRFAAVSVILIVLAFYIEGKKCLPRREQLPGII 75
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + G+K + + + ++ P+ + +L + + + I
Sbjct: 76 AMGLTGIALFNFLIYSGVKLSTATNMSLLNAVGPVTTACLAALLLNERLTLRQLAGVAIS 135
Query: 294 VIAMVVYLLPT 304
+++ +
Sbjct: 136 FFGVIIVVAKG 146
>gi|163793870|ref|ZP_02187844.1| predicted permease, DMT superfamily protein [alpha proteobacterium
BAL199]
gi|159180981|gb|EDP65498.1| predicted permease, DMT superfamily protein [alpha proteobacterium
BAL199]
Length = 301
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 94/293 (32%), Gaps = 12/293 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++G F A I G+ + V + R + + V +
Sbjct: 14 ANDRLVGFALAFAASIGLGLAVAVARIAFEGGTDGQSVATVRAWFVVAVVGAWCLASGRS 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + T + + ++LA + I A+ + + +FV P + ++
Sbjct: 74 LRVGRTTWLH------CLGLGSLLAYMFFGNIGAVKYIPVGVAALLFFVYPPLVAVFTAI 127
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA----VTWSAYCFARKTIPVGSS 193
+ L+I+A L+ L +M L + +A + V
Sbjct: 128 LDRRWPGLLRIVAFLVAFGGLAVMLGVGHGHLNPIGLALGLGAGVACGFQVTWISRVMKG 187
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M +A+ A + + + G LL ++ I R
Sbjct: 188 RDSLVIMFHMAVVAAVVLSVATPLLTGYTLPVTTLGWIGAAGVVLLQGCSIPLYFASIPR 247
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
T I+ P+ IV++ + + + + G+V+ +++ L
Sbjct: 248 IGAETSAIINNLQPVTSIVAAYLLFGEAMTQSQVAGGGMVIGGILLLQLAGRK 300
>gi|126739998|ref|ZP_01755688.1| hypothetical protein RSK20926_14966 [Roseobacter sp. SK209-2-6]
gi|126718817|gb|EBA15529.1| hypothetical protein RSK20926_14966 [Roseobacter sp. SK209-2-6]
Length = 312
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 100/313 (31%), Gaps = 17/313 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ + ++G + IL + + L + V V +V+ R +
Sbjct: 1 MKPDLTHDRPLLGIALMLGFCILIPLGDAIAKLLAESVPVGQVVFVRFAAQAILLVPISY 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ L L + L +L + AL FV P I +
Sbjct: 61 FMGQSLKLPRALLPMVLLRTLLQMAGI------SAMFTALRYLPLADAVAIAFVMPFIML 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG- 191
LG +L E + ++ A ++ + L++ S + A+ A FA +
Sbjct: 115 LLGKYYLNEDVGWRRLAACIVGFVGTLLVIQPSFAVVGLHALWPLAVAVIFAVFMLVTRK 174
Query: 192 --------SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + + LF L L G L +F
Sbjct: 175 ISKETSPIPLQALSGIIASVLMLPLFAFGQGFDIAVLSTDLPPSDTWFLLAAAGALGTFA 234
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ ++ ++ A ST+ M+Y ++ I + +T+ + + + A +Y +
Sbjct: 235 HLLMTWSLRFAPASTLASMQYLEIPFATLAGWAIFNELPNTLASFGIALTMAA-GLYAIM 293
Query: 304 TVINSGKNKTKKS 316
S + T KS
Sbjct: 294 RERTSAREATLKS 306
>gi|52424940|ref|YP_088077.1| RhaT protein [Mannheimia succiniciproducens MBEL55E]
gi|52306992|gb|AAU37492.1| RhaT protein [Mannheimia succiniciproducens MBEL55E]
Length = 294
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 87/276 (31%), Gaps = 9/276 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+L+G+T + + ++ RV+ + + + L+ L + K V
Sbjct: 25 FTAVLFGLTGVLGVIIS-ADSDVIVLGRVIIAFLALSVYFLIKREKLTAL-----STKDV 78
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
S +L HW F A+ + + + P +F +E+L ++I
Sbjct: 79 ANQSLSGALLTAHWVTFYVAVKVGGVAVATLGFAGFPGFVALFERLFFQEKLKRRELILL 138
Query: 152 LLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ + + L+++T L + A + + +
Sbjct: 139 IAVTIGLILVTPQFEFGNQSTQGLLWGIFSGAIYGILAILNRKNINKLSGTQASWWQYLI 198
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
++ F+ + + L S + +F + T ++ P+
Sbjct: 199 GSILLFPFAAHKLPAVSVTDWFWIACLGLLCTSLAYTLFVSSLNIINARTAAMIISLEPV 258
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ + L + I I+++++ V
Sbjct: 259 YAILIAWIWLGEQPGLRMIIGGLIILLSVGVVNFRR 294
>gi|228926002|ref|ZP_04089083.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228833714|gb|EEM79270.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 320
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ LL
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMLLSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFTLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 302
Score = 36.0 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMLLSFFGVILVLLKG 157
>gi|182678306|ref|YP_001832452.1| hypothetical protein Bind_1323 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634189|gb|ACB94963.1| protein of unknown function DUF6 transmembrane [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 293
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 99/293 (33%), Gaps = 8/293 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + G +++ + + T+ L + +LEV R G +++
Sbjct: 6 PWLSGIIWMSLTTLFFVCQDSTTRILMQSYPLLEVTWARYFIHALGAACIVLWRR----- 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +A + + +T+L F ++ + + +VTPV+ L + LK
Sbjct: 61 --PSAMRAQAPSLQLIRSTLLLGITLFANLSIQHLRFVDYTAIMWVTPVLVTALSVLVLK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + ++ +L + I++ +G+ S + A+C A I G ++
Sbjct: 119 EMVGLVGWLSVCAGMLGVFIISDPTGLDFSSWMVLPLIGAFCNASYQITTRLLYGRDSQL 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
AL V D + GLL A ST+
Sbjct: 179 TTFFYTALVGGVVTSVILPFIGIWPTWSDAALMGLLGLLGGGSHYCLIRAYTVAPASTIA 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
YT+ L + S+ + + I +V V +L + K K
Sbjct: 239 PFGYTSLLWATLFSLTLFGEIPSVRSVIGALFIVAGGVSMVLSQNKGTLKQKK 291
>gi|300770002|ref|ZP_07079881.1| possible permease [Sphingobacterium spiritivorum ATCC 33861]
gi|300762478|gb|EFK59295.1| possible permease [Sphingobacterium spiritivorum ATCC 33861]
Length = 303
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 4/288 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WG+T + + VS + ++ +RV + + V+ + + K
Sbjct: 10 ILVLHVTVLIWGLTGILGGLIS-VSAIHLVWYRVGIAAIALAVYFVFKRQSIVVSKRDFL 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V + + + + L+S + + + +
Sbjct: 69 -KFFMTGAVVGLHWVLFFYSIKVSTVSVTLVTLSSVTLYTAIFEPMLYKRKIAALDIVIG 127
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
II + + +GI K + S + A
Sbjct: 128 LIIILGIYTIFQFETRYLAGIISGLACAFCASVFSILNGKMVKSSSPTIITFYEMLGAFF 187
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ + L L+ + + + + +K TV +
Sbjct: 188 WISVFMLFSGDFNASMQLSQQDLWYLLLLGVVCTAVAYVMGVAVMKELTAFTVALTTNLE 247
Query: 267 PLLMIVSSVFILK--QPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P+ I+ +V I + + + IV+ A+ +Y + K
Sbjct: 248 PVYGIILAVLIFGHKETMSLGFYVGALIVLTAVFIYPYVKTRMENRQK 295
>gi|257784924|ref|YP_003180141.1| hypothetical protein Apar_1122 [Atopobium parvulum DSM 20469]
gi|257473431|gb|ACV51550.1| protein of unknown function DUF6 transmembrane [Atopobium parvulum
DSM 20469]
Length = 313
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 21/288 (7%), Positives = 70/288 (24%), Gaps = 4/288 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
L+ ++ G L ++WG + + + + + +++ R + S+ V
Sbjct: 12 LTHNSSQTLIWKGAL--LFCALVWGGSFVVIKDAINFIPTAWLMTLRFVLSVVVVGIIFR 69
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
++ + F + + +
Sbjct: 70 KRLKENLDIRHLTFGALLGILNGFGFLFQNGALAYTTAGKTAFIASIYCAMIPFVNWLIA 129
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ + LI L + G + ++ + + +
Sbjct: 130 KKKPHISSIIAACMCVAGIGLISLGTDFSFSFGIGEQMALISAIIFAFVFVLTAELSHKL 189
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I ++ + + + + + + +
Sbjct: 190 DIITLTIVQLGVSTLPCLGWALCCETMPNFSQIPSTAWMALAYIIFIATALTGVLQNRSQ 249
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
K ++ + V V L + I + F ++ +A+ +
Sbjct: 250 KSVSPVQASLIISLDTIFAAVFGVIFLAEIITPTIFLGFIVIFVAIFI 297
>gi|297195636|ref|ZP_06913034.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197719022|gb|EDY62930.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 336
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/294 (8%), Positives = 72/294 (24%), Gaps = 12/294 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
AS G + +G + + + L + L V+ RV + +
Sbjct: 2 QASQGRSAGLGLALGSAFAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVMLPLAWRHR 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI----S 131
G L L + + A A + L + + +
Sbjct: 62 GLLRRRPALLAGFGLLAVAGVQACYFAAISRIPVGVALLIEYLAPALVLGWVRFVQRRPV 121
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ + + L + + L ++ L + + +
Sbjct: 122 TRAAAAGVVLAVAGLACVVEVWAGLRFDVLGLLLALGAACCQVGYFVLSDQGGDSDDAPD 181
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP------DTLFLIGYGLLNSFVFC 245
+ + A+ G + L + +
Sbjct: 182 PLGVIAYGLLIGAVVLTVVARPWGMDWSLLAGTAGMGGTEVPAAMLLAWIVLVATVLAYV 241
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R G++ ++ V + +L++ + + +V+ +
Sbjct: 242 TGVVSVRRLSPQVAGVVACLEAVIATVLAWVLLREHLSAPQIFGGAVVLFGAFI 295
>gi|167579078|ref|ZP_02371952.1| rarD protein [Burkholderia thailandensis TXDOH]
Length = 297
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 49/300 (16%), Positives = 102/300 (34%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S G A L+ + Y + L ++ L++ + R++W+ PG +V
Sbjct: 1 MSAAADYPRAGRGIALSVEASALFALLSAYAKLLAPLTGLDIFAWRIVWTAPGAIAIVVL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLSRAFASARFALSLAASAGLLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSGLQWLALACAATGVAHELWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + +P + G + L L L +
Sbjct: 181 ADSLALFAVEMLALLPVAAATLAAGGTSVADRPLLWALLLPGLGAISTLALASYL---KA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLDEALSWQQLATYAPIWAAVALTAWHGFLMARR 297
>gi|332300880|ref|YP_004442801.1| protein of unknown function DUF6 transmembrane [Porphyromonas
asaccharolytica DSM 20707]
gi|332177943|gb|AEE13633.1| protein of unknown function DUF6 transmembrane [Porphyromonas
asaccharolytica DSM 20707]
Length = 306
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 99/289 (34%), Gaps = 17/289 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE--VISHRVLWSLPGVFFAI 71
K + +G L + +G+ PL + + V E V+ +R L + V +
Sbjct: 2 TDKTSTPSTDWLGYLMGLISSATFGLIPLLSIPVLSQGVAEGTVLMYRFLIAALIVGSIV 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
V L + + ++ +L+ + + I + + +F P
Sbjct: 62 VIRRESLRI------SWRSFLILLALSVLYFFSSFLLIEGYQHMPSGVATVLHFSYPTFV 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYC 182
V L + ++R+N LQ +A LL + + +++ + ++ + ++ Y
Sbjct: 116 VLLMFLVFRQRINLLQGLAVLLALCGVSLISGFFESDVTAIPLRPLFTVLFSGFCYATYI 175
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + F + V+ + A+ + ++ +G + +
Sbjct: 176 VILRHSRLEPMSSFKLTTYVMGLSAILFALFCKATGASLLLDNTTQWIYTALLALIPTVC 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ ++R + IM PL ++ L + + + I G
Sbjct: 236 ANITLVWAVQRIGSTPTAIMGALEPLTAVLVGALALGEELSLGQGIGIG 284
>gi|306834211|ref|ZP_07467331.1| integral membrane protein [Streptococcus bovis ATCC 700338]
gi|304423784|gb|EFM26930.1| integral membrane protein [Streptococcus bovis ATCC 700338]
Length = 308
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 101/307 (32%), Gaps = 10/307 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
+ + GT+ V A I WGI+ + Q+L +++ + S R++ S +
Sbjct: 1 MLNGVKMNKNLKGTIMVLMAGIAWGISGISGQYLMTHGLNINLLTSMRLIVSGLLLTVMA 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ S + + G+ VF+ L ++ ++ A+ + +V P+I
Sbjct: 61 II-SQPQHFFRAIKQLKVLGGIAVFAIIGLLMNQYAYLMAIHYTNAGTATVLQYVAPIII 119
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFA 184
+ S+ K+ + A L IL I+ H I + +
Sbjct: 120 LAYVSLKNKQLPTLSEFFAILFAILGTFIIATHGHFDGLAMTPKGFFWGIFSAVTYSFYI 179
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + G F + + + S L + + F +
Sbjct: 180 VLPVKLIRKFGSFTVIGLGMLMGGIVFPIMTRSWQYPLVLTSGNWLALFGIIIIGTVFAY 239
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
F G ++ P+ + SV I+ + + + +++A++ L
Sbjct: 240 TFFLKGTTIIGAVKGSLLAAVEPVSSVFFSVTIMHEIFYPMDFVGMIFIIVAVLTVSLHD 299
Query: 305 VINSGKN 311
+I K
Sbjct: 300 LIAVRKQ 306
>gi|229120463|ref|ZP_04249710.1| Transporter, EamA [Bacillus cereus 95/8201]
gi|228663048|gb|EEL18641.1| Transporter, EamA [Bacillus cereus 95/8201]
Length = 320
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFTLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|86606015|ref|YP_474778.1| hypothetical protein CYA_1339 [Synechococcus sp. JA-3-3Ab]
gi|86554557|gb|ABC99515.1| putative membrane protein [Synechococcus sp. JA-3-3Ab]
Length = 343
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 97/294 (32%), Gaps = 10/294 (3%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + LWG + + L + + L + R+L + V ++ + +
Sbjct: 25 LLMIAPFFLWGSAMVAMRDALSETTPLFMAILRLLPAGILVLAFRLWQGRASAASQPWHP 84
Query: 87 NPKAVGMLVFSATILAVHWGFFI--YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ V + ++ L L S P+ + + F +ER+
Sbjct: 85 QGLRGWLWVLAFALVDGTCFQGFLAQGLRETGAGLGSVLIDSQPLAVALMATWFYRERMG 144
Query: 145 HLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ++ L ++ + ++ L G ++ + +A A ++
Sbjct: 145 SLGWLSLGLGVVGISLIGLGGEGSLQVGAGVVWMLLASLSMAIGTVMMPKVAEVADPVLA 204
Query: 199 EMCVLAIPALFYVVWNGFSGG-EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + +L ++ + + + L L + ++ + +F Y + L+
Sbjct: 205 TGWHMVLGSLPLILLSALTESEQWQHLSGAHWLGLLYASVMGSAVAYALFFYFASQENLT 264
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + P+ ++ L + + V+ + GI ++ + V
Sbjct: 265 EFSSLTFLTPIFALLFGSTFLGETLTPVQWVGVGITLVCVYVINHRQEWQERLR 318
>gi|58383323|ref|YP_194896.1| hypothetical protein pU302L_090 [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|111038090|ref|YP_709177.1| PecM-like protein [IncP-1 plasmid pKJK5]
gi|194430553|ref|ZP_03063020.1| regulator protein PecM [Escherichia coli B171]
gi|291289272|ref|YP_003517604.1| permease of the drug/metabolite transporter (DMT) superfamily
[Klebsiella pneumoniae]
gi|37962802|gb|AAR05749.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|110781095|emb|CAK02679.1| PecM-like protein [IncP-1 plasmid pKJK5]
gi|194411407|gb|EDX27762.1| regulator protein PecM [Escherichia coli B171]
gi|290792233|gb|ADD63558.1| permease of the drug/metabolite transporter (DMT) superfamily
[Klebsiella pneumoniae]
gi|315617962|gb|EFU98557.1| protein pecM [Escherichia coli 3431]
gi|323959217|gb|EGB54882.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli H489]
Length = 286
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 96/295 (32%), Gaps = 16/295 (5%)
Query: 28 LFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F A +WG T + T Q+L S + V R L + + + +
Sbjct: 1 MFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALPAGLLLVMIV----------RQIPT 50
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + A +++ W ++ G + + V P++ VF+ + L + +
Sbjct: 51 GIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLMVVFISAALLGSPIRLM 110
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-----SAYCFARKTIPVGSSEGFFIEMC 201
++ A+ + ++ L L + +A A+
Sbjct: 111 AVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGTVLTRKWQPPVPLLTFTAW 170
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
LA L V + + ++ GI R + + V +
Sbjct: 171 QLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAGLTYFLWFRGISRLEPTVVSL 230
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + +P ++ L Q + ++ I +V+ ++ + + +KS
Sbjct: 231 LGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWLGQRSNRTPRARIACRKS 285
>gi|323693854|ref|ZP_08108045.1| hypothetical protein HMPREF9475_02908 [Clostridium symbiosum
WAL-14673]
gi|323502106|gb|EGB17977.1| hypothetical protein HMPREF9475_02908 [Clostridium symbiosum
WAL-14673]
Length = 296
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/287 (7%), Positives = 79/287 (27%), Gaps = 14/287 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++WG + + + ++ ++ + R +S +
Sbjct: 12 ILLALTALIWGSGFVCYKNLMSLLTPIQFVVVRSFFSAVCAGLFFLCVIRR--------A 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + ILA Y + +F V+ FL K++
Sbjct: 64 SRREWLGGFLLGGILAAAGLVQTYGIRITSSGNCAFLTGTNVVMVPFLSWALTKKKPGRS 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +AL++ + ++T+ + + T + + C
Sbjct: 124 NLFSALMMFAGVCLLTVDFNNITAVNAGDLLSFLGAFLYAVHIAVTGKLSGTVRPKAVTC 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + F + + + ++ + +
Sbjct: 184 LQFLALFTVNLLFVPLEETPFIIPPAAVLPAAYLGIVSIFIGHTLQIICQEKVDSTKAAV 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + S +L + F ++ +++++ + +
Sbjct: 244 LLSLEGVFGSIFSAILLGERYRLPALAGFVLIFLSILLSQTGGRVRN 290
>gi|309972630|gb|ADO95831.1| Hypothetical protein R2846_0377 [Haemophilus influenzae R2846]
Length = 300
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 57/293 (19%), Positives = 119/293 (40%), Gaps = 5/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 9 IQGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSL 68
Query: 84 TL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + + F++A L +G + YF+ P+I LG +L
Sbjct: 69 ITTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWL 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KERL+ +Q IA LL + H+ ++ V + + I
Sbjct: 129 KERLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGIT 187
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ I ++ S L L G++++ ++ +S
Sbjct: 188 LDIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIF 247
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 248 AVLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 300
>gi|304393848|ref|ZP_07375773.1| RhaT family protein [Ahrensia sp. R2A130]
gi|303294047|gb|EFL88422.1| RhaT family protein [Ahrensia sp. R2A130]
Length = 325
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/297 (10%), Positives = 82/297 (27%), Gaps = 9/297 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S T +G + + A + + + L +S +V+ L ++
Sbjct: 33 SSHPIKQNTPLGIILMIAAMAGFACSDALIKVLSTTMSPPQVLILLTGGGLLFFVAIALW 92
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L K I V L T +P++
Sbjct: 93 ERAKLFDRVVFAKPLLVRYGAEIIGMIGMVTA------LATAPLSTVGIILQASPLVVTL 146
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+FL ER+ + + ++ L +L++ + + + + + +
Sbjct: 147 GAVLFLGERVGIHRWASIIVGFLGVLLILRPGTGSFEPSLLWAVMAMTGLSVRDLVTRIT 206
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT--LFLIGYGLLNSFVFCIFSYGI 251
+ + L + D + L S + + I
Sbjct: 207 PPGVASSALASYTMLAALPVAIGWVLMRGEPVVAWDGSPWIMALTVALGSTGYMLLIASI 266
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ A +S V Y+ + ++ + + D +++ + + + ++
Sbjct: 267 RMAPVSVVSPFRYSRLVFLMAIGITFFGERPDAATWAGAALIMASGLYMMWREARSA 323
>gi|229096901|ref|ZP_04227870.1| Transporter, Drug/metabolite exporter [Bacillus cereus Rock3-29]
gi|228686511|gb|EEL40420.1| Transporter, Drug/metabolite exporter [Bacillus cereus Rock3-29]
Length = 295
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 92/291 (31%), Gaps = 10/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F + ++ + L + +R+L++ + +++ + LK K
Sbjct: 8 YFILFFGVFALSTSAIFVK-LADAPAAIIAFYRLLFATVILLPLLLFNKRNRNELKTLSK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G S LA H+ + +L ++ + P+ S+ G KER
Sbjct: 67 K--QWGFGFLSGLFLAGHYVLWFESLQYTSVASSTVIVTLQPLFSMIGGYFLFKERFTKG 124
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+I L+ I +++ + +A F
Sbjct: 125 AVIGCLIAISGSIVIGWQDFQISGDALYGDILAFMAAGIITAYFFISQHIRKDLSLIPYS 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A F ++ F+ + IF++ +K + +
Sbjct: 185 VISYGSSACFLGIFAYMQQQSFIHYATQTWLSFIGLAFIATILGQTIFNWLLKWMSATVI 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + V + FIL + I + + I+ I + ++LL + + K
Sbjct: 245 SMSILGETIGTCVLAYFILSETITLQQALGISIIFIGLTLFLLQPKLVNRK 295
>gi|240145900|ref|ZP_04744501.1| transporter [Roseburia intestinalis L1-82]
gi|257202049|gb|EEV00334.1| transporter [Roseburia intestinalis L1-82]
gi|291537947|emb|CBL11058.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Roseburia intestinalis XB6B4]
Length = 321
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/309 (9%), Positives = 79/309 (25%), Gaps = 18/309 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ T ++ + +WG + Q + R + + + +
Sbjct: 1 MNNKTTRNSILLLVTAAVWGAAFVAQTVGGQTIGAYSFNCVRCIIGALVLIPVMKFLDKK 60
Query: 78 ---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + L + +L + ++ V +
Sbjct: 61 DLSPRKPQTKEDYKLLIKGGICCGVALCISTNLQQVGILMGASAGKAGFLTAVYILLVPI 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ++ A L ++ L + + + + A F+ + + V
Sbjct: 121 LGLFLHKKCGINIWFAVALALVGLYFLCMQDKNGFQPADLLLLCCALGFSIQILFVDYFS 180
Query: 195 G--------------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + +G FL L +
Sbjct: 181 PKVDGVRLSMIQFLVTGLLTAIPMFTVDMQHSISGIEAWASAFLSWSAWVPILYAGIMSC 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + G + ++ + V IL Q + T + ++ A+++
Sbjct: 241 GVGYTLQIIGQNGLNPTVASLIMSLEAVFSAVFGWLILGQKLSTKEILGCCLIFSAIILA 300
Query: 301 LLPTVINSG 309
LP +
Sbjct: 301 QLPVQRKAK 309
>gi|254464506|ref|ZP_05077917.1| integral membrane protein [Rhodobacterales bacterium Y4I]
gi|206685414|gb|EDZ45896.1| integral membrane protein [Rhodobacterales bacterium Y4I]
Length = 320
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 48/291 (16%), Positives = 94/291 (32%), Gaps = 25/291 (8%)
Query: 38 GITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
+ + +FL + EV+ R + ++ + IV GG LL+ + +
Sbjct: 23 SVIDMIFKFLSGDYPLYEVVLFRSVIAVAVMLAIIVPLEGGYHLLRTHQPK-----LHLA 77
Query: 97 SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIIL 156
++ F L F TP+I L ++FL ER + A + L
Sbjct: 78 RCLVVFFANICFFTGLTLLPLAEAVAIAFATPLIVTTLSALFLGERPGPWRWGAVIAGFL 137
Query: 157 SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF 216
+LI+ AI A +A + + G + P L +++ +
Sbjct: 138 GVLIIMRPGPGTFQPAAILPLLGACGYASLHVLTRRAGGTEAGATLAFYPMLGFLLLSAL 197
Query: 217 -------------------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ D +LIG GL S + S + + +
Sbjct: 198 AGLIFGDGRFATGDSPAFDFILRAWIWPAPQDWPYLIGVGLAGSIGGYLVSQAYRMNEAT 257
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
EY A + ++ V I + D +++ + +V + +
Sbjct: 258 LAAPFEYIAMPMSVLWGVLIFNEWPDPAVWAGSALIIASGLVSVWRETRKN 308
>gi|206967550|ref|ZP_03228506.1| transporter, EamA family [Bacillus cereus AH1134]
gi|229188788|ref|ZP_04315823.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 10876]
gi|206736470|gb|EDZ53617.1| transporter, EamA family [Bacillus cereus AH1134]
gi|228594689|gb|EEK52473.1| Transporter, drug/metabolite exporter [Bacillus cereus ATCC 10876]
Length = 308
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 100/294 (34%), Gaps = 14/294 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + + LWG++ Q+L VS ++ ++ R+L + + ++ +
Sbjct: 5 RRIGLIMIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + FI + + F+ PV+ +
Sbjct: 65 QIWKHPRYSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITMYVAFEQ 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPV 190
++ +Q+ A + ++ + + I + L A+ ++ Y ++
Sbjct: 123 RKFPASMQLFAIIAALIGTYFIITNGSIENIVLSKEAIIFGLLTAIGFAFYTLHPASLIK 182
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I +L + + F + + LI + + F ++
Sbjct: 183 ACGTTIVIGWGMLIGGIALLIYNHSFGWNQFSQTFTLKTFSMLILIIISGTLSFLLYIGS 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K + I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 243 LKYLAATETSILSSIEPLVAAIVSITWLSESFGAYQLLGGICIVLSVIFLTMPQ 296
>gi|37675876|ref|NP_936272.1| hypothetical protein VVA0216 [Vibrio vulnificus YJ016]
gi|37200416|dbj|BAC96242.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 368
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/278 (9%), Positives = 83/278 (29%), Gaps = 6/278 (2%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + WG + T+ + + ++ + +S+ + V L K
Sbjct: 88 LLLLVAVFWGTSYGLTKSALVYTSV-LLFISIRFSITFLCMLPVVIRDFRQGLNKDWKIA 146
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF---LGSVFLKERLNH 145
G ++ + V A + + + + + L +
Sbjct: 147 IPTGFILSAIFFCEVFGVSQTSASNAAFLISLTVILTAFAELVINKKRISNTLLALTVCS 206
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + L + + +L+ A+ R T + + +
Sbjct: 207 VIGVLLLTSEQGIELSLNTGDYFILTAALLRALMVTMTKRFTEGKAITTSTLTSLQSFVV 266
Query: 206 PALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ V + + F F + +Y ++R + V ++
Sbjct: 267 ASCAIVGVLVYVPAAEIVLPVSLEFWLTVAYLVLFCTLFAFYVQNYAVRRTSPTRVSLLM 326
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ PL + ++ L++ + ++ + +++ +++V
Sbjct: 327 GSEPLFGAIFAMVWLQESLTALQLLGGALILFSVIVTS 364
>gi|33597797|ref|NP_885440.1| putative integral membrane protein [Bordetella parapertussis 12822]
gi|33574226|emb|CAE38558.1| putative integral membrane protein [Bordetella parapertussis]
Length = 298
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 79/287 (27%), Gaps = 16/287 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G + +W + + + + + + I+ R L +F +V L
Sbjct: 8 RVGLGLMLLTIFVWAGSWIAMKLVVPYIGPFDFIAVRYLSGAVVLFSILVATGRPLG--- 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
P L+ +AT + GF AL++ S + P V ER
Sbjct: 65 ----MPPWKLTLLAAATQITGFQGFVQTALISGGVGKVSLMAYTMPFWVVLFAWALQGER 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA--------RKTIPVGSSE 194
L + L+ +A+ + R
Sbjct: 121 PTARHWGGIALAAVGLVCFLDPWAGLGDLAPVALGLCSGLCWGLGTVLSKRMFERHAPDI 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F +L + + G + + + ++ ++R
Sbjct: 181 MTFTAWQMLLGGVVILPFAWLVPQIPAQWGGWRLWLGMSYIVLVATALGWILWLLVVRRV 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S G+ P++ ++ + IL + +++ + V
Sbjct: 241 PASIAGLSSLGVPVVAVLLAWAILGERPTLTEMAGMALILFGLWVVS 287
>gi|333031189|ref|ZP_08459250.1| protein of unknown function DUF6 transmembrane [Bacteroides
coprosuis DSM 18011]
gi|332741786|gb|EGJ72268.1| protein of unknown function DUF6 transmembrane [Bacteroides
coprosuis DSM 18011]
Length = 309
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 88/281 (31%), Gaps = 16/281 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ GT++ A I +G PL L E + V V+ +R + + + L
Sbjct: 1 MSKTKGTIYGIIAAISYGTNPLGALSLYQEGIHVNSVLFYRYALAALVILMILFAKKESL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K LK ++ + A + + S FV P++ L +VF
Sbjct: 61 KINKLELK------IVSLLGLLFASSSLTLFTSFHYMDAGIASTLLFVYPIMVAVLMAVF 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPV 190
KE+++ I++ L + + +++ G+ L+ ++ ++
Sbjct: 115 FKEKISATTILSIALALTGISLLSNGGDGETLNLTGVILVLISSLTYAIYIVIINQSAIK 174
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S + V + G + + + + +
Sbjct: 175 MSVFKLTFYVLVFCVLTTVTYSLFGGGEPIQWLTTSSSWGYVWMLAIVPTVISLITMTLA 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ + IM PL ++ V I + + +
Sbjct: 235 VNSIGSTPTAIMGALEPLTAVIIGVSIFGEQLTINLVLGIF 275
>gi|308181474|ref|YP_003925602.1| DMT superfamily drug/metabolite transporter [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|308046965|gb|ADN99508.1| DMT superfamily drug/metabolite transporter [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 308
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/299 (9%), Positives = 82/299 (27%), Gaps = 12/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G + WGI+ Q L ++ + + R+L + + +
Sbjct: 4 SREFKGIFLASISATFWGISGAVAQTLFDTTDINSIWLTGIRMLGAGIALLLVSLLTHVD 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + ++ + + + A+ + F+ PV V
Sbjct: 64 LWSIWRQPRDLLQIVAYTLLGLMPV--QFTYFLAVEASNAATGTILQFMGPVFIALWMLV 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
++ + +A + +L ++ H + L + S+ +
Sbjct: 122 AHRQLPTRAEGLAIICALLGSFLLVTHGNPQTLVISVWALIWGLLSGVSSATNTLLPTKL 181
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + H L + + F F
Sbjct: 182 LTKYDPMTVNTWSMLLGGILFNIVQPVWSIHIPLTMLNISKLTFVVLFGTLLAFLFFLQS 241
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + + V +++ PL + +V +L + + +++ + + + N
Sbjct: 242 LQYIRSTVVSLLDAFEPLSATIIAVVLLGVSFGWLDILGSVLIISTVFILAIGQGPNDR 300
>gi|255533881|ref|YP_003094253.1| hypothetical protein Phep_4000 [Pedobacter heparinus DSM 2366]
gi|255346865|gb|ACU06191.1| protein of unknown function DUF6 transmembrane [Pedobacter
heparinus DSM 2366]
Length = 321
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/321 (8%), Positives = 91/321 (28%), Gaps = 24/321 (7%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
S+ N ++ L YI+WG T + + L + + R L + +
Sbjct: 3 SQLNKKASPLIVILAFAIVYIVWGSTYFFIQKALAGFPPFILGAFRFLAAGLLLITWCSI 62
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ K + A +++ L + I G + +
Sbjct: 63 KGEKIFDKKSIRQAAIAGILMLGIGNGLVIWVEQSIP-----SGLVAILVSSAAMWFVIL 117
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSA 180
+ + + ++ ++ + ++++ + L+ +A A
Sbjct: 118 DKPKWKENLQSTSTVMGLIIGFIGVILLFAEQVMHTLNNNQSNTQIVGIVLLLLAPIGWA 177
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAI-----PALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
++ + + + + + +
Sbjct: 178 AGSLYSKYNTTTTVSVSVNTSWQMLAAGIAFMPGILFNSELKDFDWHMVSADAWLSVGYL 237
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ F + + + + V Y P++ ++ S+ + + ++ +++
Sbjct: 238 VIFGSIAAFSAYVWLLSVRPATQVSTYAYVNPVVAVLLSILFTSEKVTIIQVAGLVVILG 297
Query: 296 AMVVYLLPTVINSGKNKTKKS 316
++++ L + K K +
Sbjct: 298 SVLLINLAKYRKEHQLKQKTA 318
>gi|271966604|ref|YP_003340800.1| regulator protein PecM [Streptosporangium roseum DSM 43021]
gi|270509779|gb|ACZ88057.1| regulator protein PecM [Streptosporangium roseum DSM 43021]
Length = 318
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 85/278 (30%), Gaps = 18/278 (6%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
A +WG T L T +L L + R L + + +
Sbjct: 13 TALAPAIWGSTYLATTEWLPPDRPLLAATVRALPAGLILLAFTRTLPTWI---------- 62
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
LV + A G + + V P+ + L ++FL +R+ +
Sbjct: 63 WLWRTLVLGTLNIGAFLFLLFVAAYRLPGGVAAMIMSVQPMFVLILAALFLGDRIRFTHV 122
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-------FFIEMC 201
+A +L + ++ + L + +A I + G
Sbjct: 123 VACVLGAGGVALLVFKGIVALDFVGVAAALGGAACMATGITLTKRWGRPDGVGLLPFTGW 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L L + + G + F L + I+ GI+R V
Sbjct: 183 QLVAGGLVLLPFALSIEGLPATITGTNLIGFAYLILLGAVISYAIWFRGIERLPALAVSF 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +P++ + L + + + + ++++A ++
Sbjct: 243 LVLGSPIVATLLGYLFLHETLSIPQLVGILVIIVAALL 280
>gi|99080505|ref|YP_612659.1| hypothetical protein TM1040_0664 [Ruegeria sp. TM1040]
gi|99036785|gb|ABF63397.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 330
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 90/265 (33%), Gaps = 8/265 (3%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
+ L++ R +++ G+ A+V + + G+ + ++
Sbjct: 60 LAPPLHALQISQGRFVFAFIGISAAVVVLRQKI--------HTPHWGLHIGRSSFGWGGV 111
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
++ + F+ PVI + L FL E++ + +AA + +L +++ +
Sbjct: 112 TLMFASVAFIPLADATAISFLNPVIGMILAIPFLGEKVGPWRWLAAAIALLGAMVLLRPT 171
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
A+ +A + I + + + +L + L +V + + +
Sbjct: 172 PASFQPAALLAFGAALAMGAELIFIKTLARREPPLQILWVNNLIGMVIASTAALAVWQMP 231
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
L+ G L + F + RA S V Y + + I D V
Sbjct: 232 TPAQWAALVALGALMACAQACFVNAMARADASFVAPFAYATLVFAALYDALIFGVLPDWV 291
Query: 286 RTIVFGIVVIAMVVYLLPTVINSGK 310
+ GI++ + +N +
Sbjct: 292 TVLGAGIILSGAGLLAWRESVNGKR 316
>gi|307942329|ref|ZP_07657680.1| putative integral membrane protein [Roseibium sp. TrichSKD4]
gi|307774615|gb|EFO33825.1| putative integral membrane protein [Roseibium sp. TrichSKD4]
Length = 326
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 51/326 (15%), Positives = 98/326 (30%), Gaps = 31/326 (9%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVY 73
+ A +G F+ A ++ + + + L L E++ R L LP V + +
Sbjct: 5 ATSPAQNSVSVGIGFMLIAVLVISVNDMLIKKLSGGYPLHEMVFFRSLIGLPIVLWFVHL 64
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G L L V F L + +F P++
Sbjct: 65 EGGFTQLRAKRYGLLFLQ------GGFLVVANILFFMGLAALPLAEATALFFAAPLMITV 118
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARK 186
L FLKER+ ++ A L+ +++M G +L L +
Sbjct: 119 LSVPFLKERVGLFRLSAVLIGFAGVIVMLRPWEGEPVEGGHLVLLLPVLAAACYAARQIV 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGF-----------------SGGEHFFLGNIPD 229
T +G + + L I LF + + D
Sbjct: 179 TRKLGMTVKASVMTVYLQIIFLFVSLGFFLVAGDGRYAEGLDNPSLHFVLRAWIWPEGND 238
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ G+ + FS A ++ V EY + ++ + D+V +
Sbjct: 239 IYLFLLLGICSGVGAYSFSKAYSSADVAVVAPFEYLGLPIAVLFGWMFWGEWPDSVAGLG 298
Query: 290 FGIVVIAMVVYLLPTVINSGKNKTKK 315
+++ ++ L + K K
Sbjct: 299 MLLILAGGLIVFLRERHLNRKLTRMK 324
>gi|292488886|ref|YP_003531773.1| putative DMT superfamily transporter [Erwinia amylovora CFBP1430]
gi|291554320|emb|CBA21685.1| putative DMT superfamily transporter [Erwinia amylovora CFBP1430]
Length = 335
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 92/293 (31%), Gaps = 13/293 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A ++W + + ++ + + +R L +L + +
Sbjct: 47 LFPLLAVLIWSVNAIVSKLSASAIDPAAISFYRWLLALLVLSPFAL----PGVWRHRQQI 102
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+LV + ++ YA + + P+++V L V ++
Sbjct: 103 KQSWWRLLVLGLLGMVMYQSLAYYAAHSVSALFMGIIAALIPLLTVLLSVVVMRLAPTRG 162
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ +LL L+ + G+ + + ++Y +
Sbjct: 163 ILLGSLLSFCGLVWLVSRGDPAQLLIHGLGKGEMMMFAASTSYALYGVLTRRWAIALPDW 222
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + I ++ F L L L + ++ G+ R S+
Sbjct: 223 QSLWMQIFFGVLLLTPVFLLAPDVSLNAHNLPLVLFAAIPASVIAPFLWIQGVMRLGASS 282
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P+ V +V L + + + I GI + +++ + SG+
Sbjct: 283 TSMYMNLVPIFTAVIAVGFLHEALHSYHFIGGGIALAGVILAQRLRIPLSGRR 335
>gi|260913599|ref|ZP_05920075.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260632138|gb|EEX50313.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 282
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 87/281 (30%), Gaps = 3/281 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ + V IL+G + ++ +E S ++ RVL + + + L+ L
Sbjct: 3 KHSLALIKVHGTAILFGASGIFGFLIES-SSEALVLGRVLIAFASLALFFLIKKQVLTKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + ++ + G + + SF FV + L +
Sbjct: 62 SLKEMLLQLFLGGLLALHWVSFYQGIKVGGVAVGTLGFASFPAFVALFEMLILKERLKSK 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L I+ LI+++ + L I + +S
Sbjct: 122 EYFLLVSISIGLILITPEFEFGNQSTQGLLWGIFSA--ISYGLLAVLNRINSTKLSGAQA 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ +V FS + + L +F + +F + T +
Sbjct: 180 SWWQYLMVAIVLLPFSAHQLPQVSLQDWFWIACIGLLCTTFAYTLFVSSLDTINARTAAM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ P+ I+ + L Q + I+++++ V L
Sbjct: 240 IISLEPVYAILIAWLWLDQTPSLKMLLGGAIIIVSVAVVNL 280
>gi|228932246|ref|ZP_04095131.1| Transporter, EamA [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228827440|gb|EEM73189.1| Transporter, EamA [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 320
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T G+
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGVFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 302
Score = 36.8 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|300362849|ref|ZP_07059019.1| DMT superfamily drug/metabolite transporter [Lactobacillus gasseri
JV-V03]
gi|300352899|gb|EFJ68777.1| DMT superfamily drug/metabolite transporter [Lactobacillus gasseri
JV-V03]
Length = 297
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 85/290 (29%), Gaps = 12/290 (4%)
Query: 29 FVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
A + WGI+ L+ + L ++ + + R++ S + LK
Sbjct: 10 LAALACVFWGISGLFAKGLFNISASITPIWISQVRMVLSGILLLIFAQVTGK--KPLKTM 67
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
A+ ++ + L + + + + F+ P +F VF + L
Sbjct: 68 TDKKDAITVIAYGLLGLLPVQYCYFIVVQQANASVATVLQFIGPFFVLFYMVVFEHQVLR 127
Query: 145 HLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ +IAA++ L + + H P + ++ +
Sbjct: 128 AVDVIAAIVAFLGVFFLATHGHFNQLSLTPSVLFWGLISAVGVATNTLIPRRLLDHTSSL 187
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + L + F ++ K ST
Sbjct: 188 VVTGWGLLFSGIALALAHPVWPKIPNNINIFWLMAGVIVIGTLIPFQWMMGSLRYIKPST 247
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+++ P+ + SV I + + I +++ A++
Sbjct: 248 ASLLDAFEPVSATIGSVIIFGLVMAPIDWIGSIMIICAVLALNWEPKHKR 297
>gi|224368079|ref|YP_002602242.1| putative permease of the drug/metabolite transporter (DMT)
superfamily [Desulfobacterium autotrophicum HRM2]
gi|223690795|gb|ACN14078.1| putative permease of the drug/metabolite transporter (DMT)
superfamily [Desulfobacterium autotrophicum HRM2]
Length = 352
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/286 (9%), Positives = 78/286 (27%), Gaps = 3/286 (1%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +L+G + L V + L + GV ++
Sbjct: 11 IIIGMVSALLFGGATPAGKALLGGVEPQALAGLLYLGAALGVLPVVMGERAFQ--WPWHA 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + L S + V +V LG +E L+
Sbjct: 69 GRNTFLLLAGAILLGGILGPFLLLLGLKIASSGSVSLWLNLELVATVLLGHFVFQENLSR 128
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+AA +++ +++ + + + +
Sbjct: 129 RAWVAAGGTLIAAMLLAGNDAGGFFPGLLVFLGCICWGFDNHFTALIDGISPAQTTLWKG 188
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ L+ + ++ + ++
Sbjct: 189 SVAGVFNLVLGGAVAGGIGSPGVVIMALLVGVVSYGCSITLYVMAAQGLGAVRSQMVFSV 248
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
AP ++ SV +L + V+ + ++V+++ V +++ ++
Sbjct: 249 APFFGLLLSVTVLGETFTHVQAVAALLIVVSLFVLFSEQHVHNHRH 294
>gi|163746471|ref|ZP_02153829.1| integral membrane protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380356|gb|EDQ04767.1| integral membrane protein, putative [Oceanibulbus indolifex HEL-45]
Length = 300
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 92/297 (30%), Gaps = 10/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + + A + I ++ + + V ++I+ + L
Sbjct: 1 MDNLRGAMLMVLAMAGFAIEDMFVKLTSDALPVGQIIALLGAGGGAIFAVILRIQGRRLF 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T+ V ++ S TP+ ++FL
Sbjct: 61 SADMLSGPILLRAVGEVLGTLCFVTA------IVLTPLSSASAILQATPLAVTLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + A ++ L +L++ +L++ S A + +
Sbjct: 115 GEPVGWRRWSAIVVGFLGVLLIVRPGLEGFNALSLFAVASVIGLALRDLATRQVPRSISS 174
Query: 200 MCVLAIPALFYVVWNGFSG---GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
M + + + V G + + ++L ++ + ++ ++
Sbjct: 175 MQLSFLAFIVLVPAGLILMLAAGTPAAMPGGAEVVYLGAAMVIGVLAYYAIVAAMRVGEV 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S V Y L +V + + + DT+ + I++ + V L + + +
Sbjct: 235 SFVTPFRYMRMLFALVVGIMVFDESPDTLTLVGAAIIIASGVYTLWRERKITPRPRR 291
>gi|228948138|ref|ZP_04110422.1| Permease of the drug/metabolite transporter [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228811496|gb|EEM57833.1| Permease of the drug/metabolite transporter [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 303
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 89/297 (29%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + L ++ + + R + + + S L
Sbjct: 2 YVIMLFVPLFWGGSFATAEHVLTEIPPITAATIRFGLAGCILIGIVF----MKSEWNTGL 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 58 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 117
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 118 KVGISLILSLIGVIVVITSGSLDTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 178 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 238 LGASKASMYLNLTPIVATSISVVLYGAAVTWQQIAGMIIVLIGVYIATVQSNKDIKK 294
>gi|218905618|ref|YP_002453452.1| hypothetical protein BCAH820_4503 [Bacillus cereus AH820]
gi|218537745|gb|ACK90143.1| putative membrane protein [Bacillus cereus AH820]
Length = 309
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 89/297 (29%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S L
Sbjct: 8 YVIMLFVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTGL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGISLILSLIGVIVVITSGSLNTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEILYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 244 LGASKASMYLNLTPIVATSISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 300
>gi|229543428|ref|ZP_04432488.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
gi|229327848|gb|EEN93523.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
Length = 301
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/291 (10%), Positives = 89/291 (30%), Gaps = 12/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + + + ++ + +R+ ++ + +
Sbjct: 4 YIALIAGVLAVTSSAILVKY-STADAGVIAFYRLFFTTIIMMPIFLAARK----KAKMRM 58
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K V + S +LA H+ + +L ++ + PV + +E L+
Sbjct: 59 LKKDVFFSILSGALLAFHFILWFKSLNLTSVASSTVLVTLQPVFTFAGSYFIFRESLSLK 118
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
I+ A I ++++ + I+ + S+
Sbjct: 119 AIVCAAFSIFGSILISWGDFFISGKALYGDVLALISCLFVTAYMMIGQYVRQRSDVVSYT 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V + + F+G + FL+ L +FS+ +K S V
Sbjct: 179 FIVYLASTVVLFFYVLFAGEAFYPYSARNWICFLLLAVLPTLAGHSVFSWVVKWISASVV 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ + + + + I + + I+++++ +L +
Sbjct: 239 SVAILFEPVGAAILAYLLFGEKISWFQAVGGIIILLSIAYFLAQDHAEHRR 289
>gi|262067158|ref|ZP_06026770.1| transporter, EamA family [Fusobacterium periodonticum ATCC 33693]
gi|291379116|gb|EFE86634.1| transporter, EamA family [Fusobacterium periodonticum ATCC 33693]
Length = 301
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 91/301 (30%), Gaps = 14/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + G L +F A +WG + ++++ R + ++ + +++
Sbjct: 1 MNKKSYFGDLMLFLAAFIWGTAFVAQVTGMDKIGPFTFNMARSIVAVICLGAYLIFTKAK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K L + + L T F +I F+ +
Sbjct: 61 IPKNKAFLLKGGLIC-----GIFIFTGTSLQQIGLQYTTAGKTGFITSFYILILPFITMI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVG 191
FLK +++ L I+ ++ + L ++ + S + A
Sbjct: 116 FLKHKIDLLTWISIIIGFIGLYLLAVPSLRGFSMNKGDFIVFLGSFCWAGHILVIDYYSK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP--DTLFLIGYGLLNSFVFCIFSY 249
+ + + + E LGNI + + + +
Sbjct: 176 KVNPVELSFLQFFVLTILSGICAFIFENETATLGNIFASWKSVMYAGFFSSGVAYTLQMV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G K K ++ + ++ +L + + + IV +AM+ +P +
Sbjct: 236 GQKYTKPVVASLILSLEAVFAALAGYLMLDEVMTSREFTGCFIVFLAMIFSQIPKDLFKK 295
Query: 310 K 310
K
Sbjct: 296 K 296
>gi|171780315|ref|ZP_02921219.1| hypothetical protein STRINF_02103 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281663|gb|EDT47098.1| hypothetical protein STRINF_02103 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 303
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 103/299 (34%), Gaps = 8/299 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV-LEVISHRVLWSLPGVFFAIVYFSGGLS 79
GT+ V A I WGI+ + Q+L + ++++S L + + I + +
Sbjct: 2 NKMFKGTIMVLVAGIFWGISGVSGQYLMAHGMNIDLLSCVRLITAGVIMTTIAALNQRET 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK G+ +FS L ++ ++ A+ + + ++ P++ + S+
Sbjct: 62 FLKAVTSLKALGGIAIFSLIGLVMNQYAYLRAIESTNAGTATVIQYMAPILVLAYVSLRK 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGS 192
K+ +I+A +L +L I+ H + + + + +
Sbjct: 122 KQLPRGSEILAIILAVLGTFIIATHGHLDGLAITPCGFAWGLFSAVTYSFYIILPAKLIR 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G F + + I + L + F + +F G
Sbjct: 182 EYGSFTVIGLGMIMSGVAFPILVNPWQYKLVLNPGNLLGLFGIIIVGTVFAYSLFLMGTC 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + SV ++ + + + ++ A+++ L ++ K
Sbjct: 242 IIGPVKGSLLAAIEPVSSVFFSVTVMHEIFYPMDFLGMIFIIAAVILISLRDLVVVNKQ 300
>gi|149908331|ref|ZP_01896994.1| membrane protein, putative [Moritella sp. PE36]
gi|149808494|gb|EDM68429.1| membrane protein, putative [Moritella sp. PE36]
Length = 296
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 109/280 (38%), Gaps = 8/280 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L++ A IL G + +QVS ++ R + +F + F T
Sbjct: 8 IGRLYMLIAMILSGSIGYFALESQQVSAN-IVFVRCIIGALFLFGYVWIFKLYPDRADIT 66
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K ML+ L +W F + T +T+ Y P I + LG+ LKE++
Sbjct: 67 FKTL---LMLLVGGLTLVFNWLFLFESYKTLSIGITTVIYNTQPFILMILGAFLLKEKIK 123
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----VTWSAYCFARKTIPVGSSEGFFIEM 200
+I ++ + L+I+ L I + ++ +A +A TI
Sbjct: 124 LESLILIVIAFIGLVIVVLGGDIQQSEVKVSGVINALVAATLYAISTIYTKKITKLKPTF 183
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + VV+ F ++F +I + F++ +++ +S++
Sbjct: 184 IAMCHLCIGCVVFINFVDVDNFIANIPTGHNLIILGLVHTGFMYIFLYGAYEKSDISSLA 243
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
IM + P++ + V I + + +++++++ Y
Sbjct: 244 IMSFVYPIVALSLDVIIYDLKLTHIEISGVIVILLSLITY 283
>gi|139438304|ref|ZP_01771857.1| Hypothetical protein COLAER_00846 [Collinsella aerofaciens ATCC
25986]
gi|133776501|gb|EBA40321.1| Hypothetical protein COLAER_00846 [Collinsella aerofaciens ATCC
25986]
Length = 327
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/314 (11%), Positives = 91/314 (28%), Gaps = 13/314 (4%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWS 63
A + + G S+ + + + ++WG + + L+ + V E++ R L +
Sbjct: 18 AREDLGAGGTSRGAGARSPFFWKVLLLSVAVIWGYSFTTMKDALDTIPVFELLYIRFLPA 77
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+F N + + + + ++ +G L ++F
Sbjct: 78 SLVMFAI-------FHKRIIAHFNARNLIVGLGMGALMWGAYGLQTIGLAQTTAGKSAFL 130
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT-----LHSGIPLLSLAIAVTW 178
++ F V E+L + AALL + + ++ + G +
Sbjct: 131 TGTYCILVPFASYVLSGEKLTRYNLGAALLCLAGIGLVALDSVEFNVGDVITLGGAVFFA 190
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
K M V + +
Sbjct: 191 IQMAVTAKYGRKMDINVITFWMFVGNGVLSLATSLLFETQAPASVWTPSFIGVMAFLSVG 250
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I + G+ ST ++ ++ SV ++ + + + F ++ ++++
Sbjct: 251 CTCVALLIQNVGLAHVPASTGSLLLSMESPSGVLFSVLLMGEALTSRLLAGFALIFLSII 310
Query: 299 VYLLPTVINSGKNK 312
+ K +
Sbjct: 311 LSETHFDFLRRKPR 324
>gi|120609771|ref|YP_969449.1| hypothetical protein Aave_1079 [Acidovorax citrulli AAC00-1]
gi|120588235|gb|ABM31675.1| protein of unknown function DUF6, transmembrane [Acidovorax
citrulli AAC00-1]
Length = 323
Score = 69.2 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 87/297 (29%), Gaps = 15/297 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY 73
++S G I + + + V + ++ +R+L++LP +
Sbjct: 27 SPSSSGKAATGLALALIGAIAFSGKAIIVKLAYRYGVDAVTLLMYRMLFALPVFAAMGWW 86
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
S G L +G+ T + L L ++ P + V
Sbjct: 87 ASRGKPPL----SRRDWLGIAGLGVTGYYLASFLDFAGLAYITASLERLILYLNPTLVVV 142
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFA 184
LG + + Q++ + ++++ H + LL AV+++ Y
Sbjct: 143 LGWLLYGRGIRRGQVLGMAISYCGVVLVFGHEASLQGKDVAWGVLLVFLSAVSYAVYLVY 202
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + + + L ++ +
Sbjct: 203 SGEMVRRVGSLRLVGLATTVACVCCIAQFVVLRPLSAALVAPEVLGLSVLNAVFCTAVPV 262
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ I+R PL I+ V++L +P +V+ + V+
Sbjct: 263 LLVMMAIERIGAGAAAQAGMIGPLSTILMGVWLLGEPFTLWVAAGTVLVMAGIFVFT 319
>gi|289595879|ref|YP_003482575.1| protein of unknown function DUF6 transmembrane [Aciduliprofundum
boonei T469]
gi|289533666|gb|ADD08013.1| protein of unknown function DUF6 transmembrane [Aciduliprofundum
boonei T469]
Length = 283
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 92/290 (31%), Gaps = 12/290 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ +F ++WG T + LE +S L I+ R L + +
Sbjct: 1 MRRFTATISLFLVSVVWGATFPLVKASLEYISPLGFIALRFLLGFVVLAIFLF------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + A+ + + L + + F L + F + V + +
Sbjct: 54 --KSLKNSKDALIPGLILSIFLFLGYFFQTVGLKYTSSSHSGFITGLYVVFTPLFAVFMI 111
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KER++ IA +L ++ L +++ G + + + + + S +
Sbjct: 112 KERISVRVSIAVVLALVGLYLLSNIGGGVNFGDFLTLLCAIAYAIQVVLVAKYSRIYNPN 171
Query: 200 MCVLA--IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + + + + + ++ + S
Sbjct: 172 TLTLIELAFVFIFSIGGWGIEEFSIHWNWLMIFGVVFTGIFATAIAILVQTHAQRVLPSS 231
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I+ T P+ + S L + + I ++++ M++ L
Sbjct: 232 HAAIIYTTEPVFAGIFSYIFLGEGLGIKGMIGAVLILLGMLLVALDRAHQ 281
>gi|118586363|ref|ZP_01543814.1| permease transporter YicL [Oenococcus oeni ATCC BAA-1163]
gi|118433215|gb|EAV39930.1| permease transporter YicL [Oenococcus oeni ATCC BAA-1163]
Length = 300
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 101/298 (33%), Gaps = 11/298 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+G + LWGI + TQ+L ++V ++S R+L++ + I
Sbjct: 2 MEKNKKLGLFYGVLGPFLWGINGVVTQYLLKVVDINVNWLLSVRLLFAGTALILYIFLTD 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+L + M++F + +I A+ L + + PV +
Sbjct: 62 R-KNLFRLLANKQVYFQMIIFIIFGDFLSQYTYIIAIAKSNAALATILTSLNPVFVIIFY 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AYCFARKTI 188
K + +I+ + +L + H L ++ A + I
Sbjct: 121 VFLQKRVPQRIDVISVFVALLGTFFLVTHGSFNHLEISPAGLFWGLLAAAVYAFGTIYPI 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + + + + L + + +F ++
Sbjct: 181 GLIGEYGPLPVTAISLFVSGIAFNFYRPFFIALPTMSLSNWFLLIFFTIISTAFGTAMWF 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ +T+ ++ P+ ++ SV +L P++ + + G+V++ +V+ L T
Sbjct: 241 LSLHLIGPTTMSLLSAVEPMTAMILSVLLLSVPMELIDYLGAGLVILMIVLQSLKTRK 298
>gi|84499945|ref|ZP_00998211.1| putative membrane protein [Oceanicola batsensis HTCC2597]
gi|84391879|gb|EAQ04147.1| putative membrane protein [Oceanicola batsensis HTCC2597]
Length = 288
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 86/288 (29%), Gaps = 7/288 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G L + I + L + ++++ R L +LPG V G +L
Sbjct: 1 MTGILLMCTGVACLCINDAIAKTLAVHYAPVQILFLRNLLALPGALVIAVAMGGTAAL-- 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V + F +L + F PV L +++L+E
Sbjct: 59 ----RSYRPMAHVLRGALWLGAAALFFTSLRHLGLAEATTLIFAAPVFITALSAMWLREE 114
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A L+ +L++ + ++ +A +A I + +
Sbjct: 115 VGWRRWSAVLVGFAGVLVVVRPGSDAFQAASVLPVAAAVLYAVLMIGARWVDPRESVWTL 174
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + G + D I + + + + + A V
Sbjct: 175 MLYLVGAGALLAGLVSPFFWTPVRGEDAALFIAIAIFGTAGITMMTQAFRFAPAPVVAPF 234
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+YTA L + + D + GI+ + + + +
Sbjct: 235 DYTALLWATALGWLVWRDVPDLATYLGAGIIAASGLFIVFRERAAEDR 282
>gi|237653221|ref|YP_002889535.1| hypothetical protein Tmz1t_2556 [Thauera sp. MZ1T]
gi|237624468|gb|ACR01158.1| protein of unknown function DUF6 transmembrane [Thauera sp. MZ1T]
Length = 302
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 7/288 (2%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A ++WG + Q + V R L+ V V L + T +
Sbjct: 9 LLLVAALIWGTAFVAQQTGMRDVGPFTFTGARFLFGAVMVAPLAVLELRRLG-RRGTFLD 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + +L + +++ F + + G++ L+ER +
Sbjct: 68 ARDLLACALLGAVLFLGAALQQIGIMSTTVSNAGFLTALYVPLVPIAGALLLRERSHWSV 127
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE-----GFFIEMCV 202
A+L + ++ S L + V SA +A + VG + M
Sbjct: 128 WPASLGCVAGTYLLGGGSLAALSVGDLWVIASALFWAAHVMLVGRVAARKGASVTVAMLQ 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + L F + + + I+
Sbjct: 188 FLVVGGLGMAVGFGTEEVSSGALERALPSIAYAGILSVGVGFTLQVVAQRHTPAADAAIV 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L ++ F+L + + + ++ ++ + + +
Sbjct: 248 LSCETLFAALAGRFVLGETLTAEQMAGGLLIFACVLAVQILPLWRERR 295
>gi|148825493|ref|YP_001290246.1| hypothetical protein CGSHiEE_01960 [Haemophilus influenzae PittEE]
gi|229846312|ref|ZP_04466420.1| polynucleotide phosphorylase/polyadenylase [Haemophilus influenzae
7P49H1]
gi|148715653|gb|ABQ97863.1| polynucleotide phosphorylase/polyadenylase [Haemophilus influenzae
PittEE]
gi|229810405|gb|EEP46123.1| polynucleotide phosphorylase/polyadenylase [Haemophilus influenzae
7P49H1]
Length = 296
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 57/293 (19%), Positives = 119/293 (40%), Gaps = 5/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 5 IQGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSL 64
Query: 84 TL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + + F++A L +G + YF+ P+I LG +L
Sbjct: 65 ITTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KERL+ +Q IA LL + H+ ++ V + + I
Sbjct: 125 KERLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGIT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ I ++ S L L G++++ ++ +S
Sbjct: 184 LDIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIF 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 244 AVLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 296
>gi|229018717|ref|ZP_04175569.1| Permease of the drug/metabolite transporter [Bacillus cereus
AH1273]
gi|229024960|ref|ZP_04181389.1| Permease of the drug/metabolite transporter [Bacillus cereus
AH1272]
gi|228736295|gb|EEL86861.1| Permease of the drug/metabolite transporter [Bacillus cereus
AH1272]
gi|228742605|gb|EEL92753.1| Permease of the drug/metabolite transporter [Bacillus cereus
AH1273]
Length = 290
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 16/289 (5%)
Query: 34 YILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
G + ++ L + R + + + S G+
Sbjct: 1 MFWGGSFSTAEHVVTEIPPLVAATLRFGIAGVILMVYLTI----KSEWDMASIKKGWKGL 56
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
L+ + T + + F + S P+ +FL E+ N I+ +L
Sbjct: 57 LLVALTGIFGYNALFFLGVHYTSAINGSLIIATMPIFVTLGSILFLNEKWNSKVGISLVL 116
Query: 154 IILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ ++I+ G L A+A + + S M
Sbjct: 117 SLVGVIIVITKGSLDMLLSLAFNVGDLLFLAALACGVIYGLVGKAVMKDVSPLFATTIMT 176
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ L + + + IF+ G+++ S +
Sbjct: 177 VMGSVFLAISSLYEGGWDKVPSMSAQSWLEMFYMVVCGTLVGYIIFNKGVEQIGASKASM 236
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P++ + SV + I V+I + + + S K
Sbjct: 237 YLNLTPIVTTLISVVFYGSVMSWKEVIGMLFVLIGVYIATAKSANQSKK 285
>gi|254241060|ref|ZP_04934382.1| hypothetical protein PA2G_01742 [Pseudomonas aeruginosa 2192]
gi|126194438|gb|EAZ58501.1| hypothetical protein PA2G_01742 [Pseudomonas aeruginosa 2192]
Length = 296
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 7/256 (2%)
Query: 54 EVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALL 113
V+ R L + + G + L + T + YAL
Sbjct: 46 TVVFFRNLVGVLFFLPLALTRGIGPLRTRRPLSHLLR-------TTYGLGGMYCYFYALA 98
Query: 114 TRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA 173
+ PV + + +++KE L ++A L+ L +L++ SG + +A
Sbjct: 99 HLPLTDAMLFSYAAPVFTPLIAHLWIKEPLTRRMMVATLVGFLGVLLVARPSGAVVAPIA 158
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ S+ A + + ++ ALF +++ + N + L L
Sbjct: 159 LVGIASSLMAACAFVSIREMSDSEPAYRIVFYFALFGTLFSAVPLAWAWQPLNGQELLLL 218
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+G GL S S A +G + Y A + V + + + ++
Sbjct: 219 LGAGLFASLGQLTMSQAYALASPGVIGPIAYMAIVFAGVIAWLRWDELPSHTSLLGAALI 278
Query: 294 VIAMVVYLLPTVINSG 309
A ++ LL
Sbjct: 279 FAASLIPLLGNRPAER 294
>gi|283852212|ref|ZP_06369485.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
gi|283572438|gb|EFC20425.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
Length = 297
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 17/272 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + +LWG T + + L + R + + F G + L
Sbjct: 5 YLKLVGSAVLWGGTWVAGRILGRYMGPFSAAFLRFALASAFLVFLTRRLEGQVPRLTRHN 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ +AT + + F L T + P + +F KE +
Sbjct: 65 ----VPWLLLLAATGIFAYNALFFAGLRTVPAGRAALIVASIPAVVALFSGLFFKESFSP 120
Query: 146 LQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++ +L + ++ L G + +A + +K + +
Sbjct: 121 AKLGGIVLSFCGVGLIVAGGDPAGLVRQGLSGGDLCIFGCVATWAAYTLAGKKAMERVAP 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G C+L L + G L L F F + G+K
Sbjct: 181 YGAVTWSCILGAGMLLPPALALGLAHDVAAAGPAAWGCLLFFGILATGFGFSWYYEGVKA 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+ G+ P+ + +L +P+
Sbjct: 241 IGPTKAGVFINLVPVTAVFLGWLLLGEPLAPS 272
>gi|290961971|ref|YP_003493153.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260651497|emb|CBG74619.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 315
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/299 (9%), Positives = 81/299 (27%), Gaps = 29/299 (9%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + +G + + L + L V+ RV+ + + V +
Sbjct: 1 MLALGSAVAFGGSGTAAKPLIEAGLDPLHVVWLRVVGAALVMLPLAVRHRDLVRRRPAL- 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ F +A F+ ++ + ++ P I + + +
Sbjct: 60 -------LVGFGLFAVAGVQAFYFASISRIPVGVALLVEYLGPAIVLGWVRFVQRRPVTR 112
Query: 146 LQIIAALLIILSLLIMT-LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--------- 195
+ +L + L + + SG+ L + + + A C + G
Sbjct: 113 AAAVGVVLAVGGLACVVEIWSGLSFDPLGLLLAFGAACCQAGYFVLSDQGGDEGAGAPDP 172
Query: 196 ---------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + L L +
Sbjct: 173 LGVIAYGLLVGAVVLTVVARPWGMEWGVLGGDASMDGTAVPAWVLLCWVVLLATVIAYGT 232
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++R G++ ++ V + +L + + + + +V++ V V
Sbjct: 233 GVVAVRRLSPQVAGVVGCLEAVVATVLAWVLLGEHLSAPQILGGAVVLVGAFVAQRSAV 291
>gi|111226022|ref|YP_716816.1| hypothetical protein FRAAL6689 [Frankia alni ACN14a]
gi|111153554|emb|CAJ65312.1| hypothetical protein; putative membrane protein [Frankia alni
ACN14a]
Length = 422
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 83/287 (28%), Gaps = 7/287 (2%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
V ++WG T + Q+ +SV + R +++ ++ L + +
Sbjct: 108 VLGVAVVWGSTYVAMQWSGRFISVPAFLFLR--FAMGASTIVVLAPRAWRGLTRQEMSIG 165
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
G L+F L A S + + L
Sbjct: 166 ALFGCLLFGILYLETLGVRHTLASNAGFLISLSVILVPLIERTFLRARIARVTYPLTLVS 225
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A ++ T+ G ++ A + + L + A
Sbjct: 226 LAGCALLTLDRGFTVRGGDLIILGAALIRAVQIVLFSSQSKGRDISLLRVTGVELWVVAC 285
Query: 209 FYVVWNGF----SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
++ + F S E L + +F F Y + + + VG+M
Sbjct: 286 GGLLVSLFRPGRSVHEATHLPGEAWLVIAYLGVAGTAFAFLTQLYAARASSPTRVGLMMS 345
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T P V +V +L + + + G+V+++ +
Sbjct: 346 TEPFFAAVFAVVLLSENLGPTQLTGGGLVLLSAYLGRWADARRLASR 392
>gi|107026401|ref|YP_623912.1| hypothetical protein Bcen_4050 [Burkholderia cenocepacia AU 1054]
gi|105895775|gb|ABF78939.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia AU 1054]
Length = 310
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 84/284 (29%), Gaps = 20/284 (7%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ WG T + + L + R + + GGL L +
Sbjct: 25 LVALFWGGTFIAGRILAATMSATSAATGRFAIAALLLVVLTWQVEGGLPTLSG----RQI 80
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
V AT + ++ F AL T+ + PV + L SV ++ERL+ +
Sbjct: 81 VTTFGLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSVVVRERLSLSRWAG 140
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-------------- 196
+ + LI+ + + T+ A + +
Sbjct: 141 IAVALCGALIVISRGDWLRVLTDLGNTFGAGERFMLCAVLSWAAYTVIGRRALDGLSPLA 200
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L + L L + F +S GI+
Sbjct: 201 ATTYAALWGLALLLVTHLFDATATGGTPLTWQAVASMLYLGAVGTVIAFVWYSQGIRLLG 260
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ SV +L +P+ +V+ + +
Sbjct: 261 PARAAVFTNLVPVFGVLLSVVLLGEPLSPSMLAGGALVIAGVAL 304
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 31/131 (23%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + F I + AI AL VV G L
Sbjct: 25 LVALFWGGTFIAGRILAATMSATSAATGRFAIAALLLVVLTWQVEGGLPTLSGRQIVTTF 84
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F + R + P+ V ++++ + R +
Sbjct: 85 GLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSVVVRERLSLSRWAGIAVA 144
Query: 294 VIAMVVYLLPT 304
+ ++ +
Sbjct: 145 LCGALIVISRG 155
>gi|260466978|ref|ZP_05813160.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259029275|gb|EEW30569.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 295
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 110/292 (37%), Gaps = 7/292 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L AY+L+ + L ++V +++ R + GG
Sbjct: 9 TRERVLAGILLTGAAYLLFSTQDASIKLLVTGMTVWQIMFFRSIT-----ILGACAAIGG 63
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L DT+++P MLV SA LA W + A + Q + Y+ P+I L
Sbjct: 64 RALFADTVRSPIVRPMLVRSAFTLAA-WLCYYNAARSLQLAELTTVYYAAPIIVTVLSVF 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ L+ +A L+ + I + + L + V +A+ + + + +
Sbjct: 123 LLGEKVPMLRWLAVLIGFAGVFIACDPTHLGLSVPVLLVLTAAFLWGIAIVLLRKTALAE 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M L + ++++++ + ++P L L G L + G+KR S
Sbjct: 183 RSMIQLLLNNFYFLLFSAVPALLWWHTPDLPQLLLLASVGALGGLAQYLLFEGMKRTPAS 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +EYT+ L I + ++V A ++ +
Sbjct: 243 ILAPLEYTSLLWAFALGFAIWGDVPRREVFLGAALIVAAGLLIVGGEHFRKR 294
>gi|159040154|ref|YP_001539407.1| hypothetical protein Sare_4663 [Salinispora arenicola CNS-205]
gi|157918989|gb|ABW00417.1| protein of unknown function DUF6 transmembrane [Salinispora
arenicola CNS-205]
Length = 320
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/292 (8%), Positives = 75/292 (25%), Gaps = 13/292 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGV-FFAIVYFSGGLSLLK 82
G L + + + + + + L S + RV + + A++ G S L+
Sbjct: 10 GLLLAVLSALTFATSGTFARSLIDAGWSAEAAVIVRVGLAALVLTVPAVLALRGRWSTLR 69
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + G+L + + + V + + G +
Sbjct: 70 RNVASIGTFGLLGVALAQVCFFNAVRYLPVGVALMLEYLGVVVVVGWMWLAHGQRPRRLT 129
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A L ++ L + + + + ++ +
Sbjct: 130 VAGSIVALAGLGLVLDLAGAGRLDPAGVLWGLGAAIGLAGYFVLAGRMDANLPSVVLASG 189
Query: 203 LAIPALFYVVWNGFSGGEHFFLG----------NIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ G G + + + +
Sbjct: 190 GMAVGAGVLLLLGLVGALPLRVHLDTVDFAGYRTSWLVPVAGLVLVAAVLAYLTGVAATR 249
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ T + ++ + +L + V+ + ++V + + L
Sbjct: 250 LLGARLASFVGLTEVMFAVLIAWLVLNELPTVVQLVGGVLIVAGVALVRLDE 301
>gi|126699127|ref|YP_001088024.1| hypothetical protein CD1523 [Clostridium difficile 630]
gi|115250564|emb|CAJ68388.1| putative transporter [Clostridium difficile]
Length = 304
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/301 (15%), Positives = 101/301 (33%), Gaps = 15/301 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + I+WG + TQF ++ L++I+ R + +
Sbjct: 1 MKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFF------ 54
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K + L + + L+ +F VI F+G +
Sbjct: 55 -KQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVPFIGFIL 113
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSE 194
+ +L+ + II++L+ ++ + I++L + + I A+ + +
Sbjct: 114 YRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSEFAKDNN 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + L VV F+G + + F + KR
Sbjct: 174 PMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQTICQKRV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ I+ T + + S+ ILK+ I I ++ + + T ++ K+K
Sbjct: 234 DGTRTAIILSTEAVFGTIFSIIILKELITAKLVIGSILIF--VAIITAETKLSFLKSKKV 291
Query: 315 K 315
K
Sbjct: 292 K 292
>gi|78062545|ref|YP_372453.1| hypothetical protein Bcep18194_B1695 [Burkholderia sp. 383]
gi|77970430|gb|ABB11809.1| protein of unknown function DUF6, transmembrane [Burkholderia sp.
383]
Length = 311
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 82/285 (28%), Gaps = 21/285 (7%)
Query: 32 CAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ WG T + + L + + R + + GGL L + +
Sbjct: 25 LVALFWGGTFIAGRILAASMPATTAATGRFAIAALLLVVLTWKIEGGLPKL----SSRQV 80
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS-VFLGSVFLKERLNHLQII 149
V AT + ++ F AL T+ + PV + V L V ERL+ +
Sbjct: 81 VTTFGLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSIVVRGERLSLSRWA 140
Query: 150 AALLIILSLLIMTLHS-------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + L++ G + AV A +
Sbjct: 141 GIAVALFGALVVISRGELLRVLTDLGNTFGAGERYMLCAVLSWAAYTVIGRRALDGLSPL 200
Query: 197 FIEMCVLAIP--ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
L G G L L + F +S GI+
Sbjct: 201 AATTYAALWGLALLIVAHLVGSPAGSTTPLTWQAIASMLYLGAVGTVVAFVWYSQGIREL 260
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ SV +L +P+ +V+ + +
Sbjct: 261 GPARAAVFTNLVPVFGVLLSVALLGEPLSPSMLAGGALVIAGVAL 305
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 34/136 (25%), Gaps = 1/136 (0%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + F I S AI AL VV G L +
Sbjct: 25 LVALFWGGTFIAGRILAASMPATTAATGRFAIAALLLVVLTWKIEGGLPKLSSRQVVTTF 84
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL-LMIVSSVFILKQPIDTVRTIVFGI 292
F + R + P+ ++ S+ + + + R +
Sbjct: 85 GLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSIVVRGERLSLSRWAGIAV 144
Query: 293 VVIAMVVYLLPTVINS 308
+ +V + +
Sbjct: 145 ALFGALVVISRGELLR 160
>gi|254229378|ref|ZP_04922794.1| permease of the drug/metabolite transporter [Vibrio sp. Ex25]
gi|262396834|ref|YP_003288687.1| permease [Vibrio sp. Ex25]
gi|151938069|gb|EDN56911.1| permease of the drug/metabolite transporter [Vibrio sp. Ex25]
gi|262340428|gb|ACY54222.1| permease [Vibrio sp. Ex25]
Length = 292
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/297 (8%), Positives = 87/297 (29%), Gaps = 12/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ + ++ + ++++ ++ + I R + +
Sbjct: 3 NSERKATVILVATTMIAALGWIFSKETIQGLPPFGFIGARFTIASLCLLPLCY------- 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + ++ +F ++ + + V
Sbjct: 56 RPLLKANLKDVLSAGGVGLLLGSAVMTWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMF 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++R + ++ + +L L ++L G A A F +
Sbjct: 116 RQRPQRIFWLSLPIAVLGLACLSLVGGWKQSASQFWFLGAALVLALHFNVNSKYSQKLPV 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + F + + F + L S + + + G K +
Sbjct: 176 LLLTCVQLFSAGCLGLLVSFFMESFPAEVDSSIWWWFALSTLLATSLRYVMQTMGQKFVQ 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ P+ ++ SV + + + + +++ ++++Y K
Sbjct: 236 AGNAALIMILEPVWTVILSVLWYGEVLTANKLVGCVLILFSLIIYRTGGRFRFPTRK 292
>gi|327439148|dbj|BAK15513.1| permease of the drug/metabolite transporter superfamily
[Solibacillus silvestris StLB046]
Length = 296
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/281 (11%), Positives = 96/281 (34%), Gaps = 12/281 (4%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
++ ++ + L + +R+L+S+ + + + + + + +
Sbjct: 20 SLSAIFVK-LSSADAGVIAFYRMLFSIMIMLPWFLIKYKN----EIKVLSKRDWIFSSIA 74
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
L+ H+ + +L ++ + P+ + +F KE++ IA + IL
Sbjct: 75 GVFLSFHFILWFESLNYTSVASSTVLVTMQPLFAFIGTYLFFKEKITLQTFIAGGIAILG 134
Query: 158 LLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
++++ + IA M V ++ +
Sbjct: 135 SVLISWGDFKISGTALYGDILALIACALITGYLLFGQDVRKRLSLVTYTMVVYSVSTVTL 194
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ G I F++ + N +F++ +K + + I P+
Sbjct: 195 FFYIIVKGESFGPYPAIDWMWFILLAIIPNLLGHNLFNWVLKWTSTNVISIAILFEPVGA 254
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++FI + + + + +V++ ++++++ K
Sbjct: 255 ALLAMFIFNEYLTVSQIVGGLVVILGIMLFVIDLKKFFRKK 295
>gi|312863598|ref|ZP_07723836.1| putative membrane protein [Streptococcus vestibularis F0396]
gi|311101134|gb|EFQ59339.1| putative membrane protein [Streptococcus vestibularis F0396]
Length = 305
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 101/301 (33%), Gaps = 8/301 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV-LEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G+L V A I WG + + Q+L V + +++ L + A V+F
Sbjct: 2 SKQLKGSLMVLTAGIAWGFSGVSGQYLMAHGVNVNLLTSLRLLLSGILLTASVFFRQRDK 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L++ V + +F+ L ++ ++ A+ + +VTPVI +
Sbjct: 62 LVQAIKDRKTLVSIALFALFGLVLNQYAYLSAIQYTNAGTATVLQYVTPVIILAFVCAKY 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGS 192
+ +++A +L I+ + H L + + +
Sbjct: 122 RRFPTAAELVAIILAIVGTFTIATHGQIRELAITPLGLFWGLFSAVTYAIYILLPAKAIE 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G I + + + + L + F + +F G
Sbjct: 182 KWGSLIVIGLGLLIGGLIFPIVIQAWKYKLSLTGGNLLALFGLIFIGTVFAYTVFLKGTT 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ P+ ++ +V I+ + + ++V+A+++ L ++ K +
Sbjct: 242 MVGAVKGSLLASVEPIASVILTVLIMGDRFFAIDVVGMFLIVLAVIIISLKNLVTLKKQE 301
Query: 313 T 313
Sbjct: 302 K 302
>gi|298735746|ref|YP_003728271.1| hypothetical protein HPB8_250 [Helicobacter pylori B8]
gi|298354935|emb|CBI65807.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 298
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 104/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISDPSVENVGPVEILMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|254779778|ref|YP_003057884.1| hypothetical protein HELPY_1209 [Helicobacter pylori B38]
gi|254001690|emb|CAX29919.1| Conserved hypothetical protein; putative membrane protein
[Helicobacter pylori B38]
Length = 298
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 105/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + F +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLFIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEILMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFLDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|262169200|ref|ZP_06036893.1| putative membrane protein [Vibrio cholerae RC27]
gi|262022481|gb|EEY41189.1| putative membrane protein [Vibrio cholerae RC27]
Length = 299
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R L ++ + + ++ + +
Sbjct: 3 YLLPFFTVLIWGGNSIVNKLAASTIEPSAMSFYRWLLAMAILTPFCL----PSAIRQWST 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ YA LT S P++SVF+ L + ++
Sbjct: 59 VKRHLSKLAFLALLGMVLNQSLGYYAGLTTTATNMSLITSFVPLMSVFISLPLLNKPISA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L ++ +L + L M + + Y +
Sbjct: 119 LSVVGGVLSLSGLAYMLGEGNPLFFLHQSVTEGDALMVMAALVYALYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + + +L + ++ I
Sbjct: 179 WTLIYLQGVCAVFMLIPLWLTSDTLLPTEGSLSLIAYAGIAASLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P+ + + +L + + I +V+ + + L +
Sbjct: 239 STAMFMNLLPVFSVSLAATLLGEKVHPYHLIGDLLVISGVALSQLKIQRRN 289
>gi|83949805|ref|ZP_00958538.1| membrane protein, putative [Roseovarius nubinhibens ISM]
gi|83837704|gb|EAP77000.1| membrane protein, putative [Roseovarius nubinhibens ISM]
Length = 300
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 88/294 (29%), Gaps = 7/294 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A + G L + + + I ++ + + V V+++I R + V
Sbjct: 2 AISDNLKGALLMMASMAAFTINDMFMKMMTGQVPVVQLIFLRGALTTTAVSLLAWRMGAF 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + A+ + AL + P++ ++
Sbjct: 62 SGRIAPRDRVFVALRTGAEICATYFF-----LTALSHMPLANITAILQALPLVLALAAAL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL E +++A ++ + ++++ +I + + +
Sbjct: 117 FLGEGFGWKRLVAIVIGFIGVMLIVRPGAEGFTIYSIYGLIAVCFVTVRDLSTRRLSRET 176
Query: 198 IEMCVLAIPALFY-VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
M V + + +V+ S G + + + L L + ++ ++
Sbjct: 177 PSMLVTWVTTVAITLVYGVVSTGVDWAPISGREALLLTLTSGSIFCGYLFSIMVMRVGEI 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S YT L + F + + + GIV + V + +
Sbjct: 237 SFTAPFRYTGLLWALALGWFAFGEWPAPLTLLGAGIVAASGVFTIYREARTGRR 290
>gi|93005030|ref|YP_579467.1| hypothetical protein Pcryo_0199 [Psychrobacter cryohalolentis K5]
gi|92392708|gb|ABE73983.1| protein of unknown function DUF6, transmembrane [Psychrobacter
cryohalolentis K5]
Length = 298
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 97/291 (33%), Gaps = 18/291 (6%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+W ++ ++ + + + L S RV+ + + ++ +++ K VG
Sbjct: 13 SFMWSLSFIFYRIGVPEFGSLAFASLRVVLAGLTMLVFVILKKKNRVGIRENWKVLTLVG 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + + + + + + P+IS F+ SVF K+RL+ QI+ +
Sbjct: 73 LFSAAVPFILFAFS-----ARSVNAGVLAVLNASVPMISGFIASVFFKDRLSKKQILGLV 127
Query: 153 LIILSLLIMTLHSGI------------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ ++ ++I+ + P+ +A A + + I
Sbjct: 128 IGVIGVMILMSENLFGGQGAGSGSGLLPMGYALLACVGYALGANITRNYLENVSPVAITA 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L I ++ + + + + + + IK
Sbjct: 188 GSLIIASVIMLPVAVYEFPYGKSISLTAWISVICIGVFSTAIALIFMNQLIKSIGPVRAT 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P+ I+ +L + +DT I +++ + L + K+
Sbjct: 248 SITLVIPIFAIILGYLLLGEALDTPAIIGSIVILFGTYLSLNLSFKKMLKS 298
>gi|47566072|ref|ZP_00237110.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
gi|228984775|ref|ZP_04144947.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|229195903|ref|ZP_04322657.1| Transporter, EamA [Bacillus cereus m1293]
gi|47556989|gb|EAL15319.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
gi|228587545|gb|EEK45609.1| Transporter, EamA [Bacillus cereus m1293]
gi|228774973|gb|EEM23367.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 303
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLTVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|323492484|ref|ZP_08097632.1| membrane protein [Vibrio brasiliensis LMG 20546]
gi|323313271|gb|EGA66387.1| membrane protein [Vibrio brasiliensis LMG 20546]
Length = 274
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 6/271 (2%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
++ +V+ R + +L + I L LK + F+
Sbjct: 8 LSGEIGTFQVLFFRGVIALTVISAVIFATGQQHLLRTQRLKLHTIRNLFHFAGQYG---- 63
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
+ + F P+ + + ++FL E+L +IA LL L +LI+
Sbjct: 64 --WFVGIGLLPLAQVFALEFTVPLWTAVIAALFLGEQLTKRNLIAILLGFLGVLIIVRPG 121
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ A+ V SA C+A S + +L + + + L
Sbjct: 122 IEIVSPAALIVLASAVCYAVSHSSTKSLARSEHPLTILFLMCFIQLPVGFTLALPEWQLP 181
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
L+L G+ + ++ A +S V M++ ++ + VF+ ++
Sbjct: 182 QGTQWLWLAIIGVTALTAHYCMTKAMQHADVSIVVTMDFLRLPVIALVGVFLYQEEFQLA 241
Query: 286 RTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ ++++ + L P+ + ++
Sbjct: 242 LLVGALLMLVGNLFNLYPSNNKAPSQPRTEA 272
>gi|322515145|ref|ZP_08068148.1| DMT superfamily drug/metabolite transporter [Actinobacillus ureae
ATCC 25976]
gi|322118859|gb|EFX91049.1| DMT superfamily drug/metabolite transporter [Actinobacillus ureae
ATCC 25976]
Length = 282
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/277 (10%), Positives = 80/277 (28%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V IL+G + ++ +E S ++ RV+ +L + ++ L L
Sbjct: 3 KHTLALLKVHFTAILFGASGIFGALIES-SPDTLVLGRVMIALVCISLYFIWKKQPLVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ +A + + + +SF FV + L
Sbjct: 62 THQELFSQILSGVLLTAHWVTFFTAVQVGGVALATLGFSSFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++A + ++ + L L V + + +
Sbjct: 120 YREGFLLVAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGILAIVNRKNMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSTTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTIKMLIGGAIILLSVA 276
>gi|307307725|ref|ZP_07587454.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
gi|306901591|gb|EFN32193.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti BL225C]
Length = 296
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 89/292 (30%), Gaps = 10/292 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ +A+ + + G +P++ + L +V + RV +L +
Sbjct: 4 AASSAAPRNRLAMAALIIGGAAIGGSPIFVR-LSEVGPMAAAFWRVALALIPLVAWSRLR 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G + + A +L LA+ + AL + + PV
Sbjct: 63 GGAAAEKPPQCLSDYAQLILP--GVFLAIDLAAWHLALTMTSVANATLLANLAPVFVTLA 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIM-------TLHSGIPLLSLAIAVTWSAYCFARKT 187
G + ++ + + I ++++ +A + A
Sbjct: 121 GWALFRSAVSGIFLAGLATAIAGVVVLKGGPAALGGGDLAGDGIAIVAAAFYAGYILAIG 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I + A A+ + + F + + ++
Sbjct: 181 RLRSRFSTNRIMIWSTASAAVCMLPMALLTEPSLFPPSAFGWAMLFGLAFVSHAGGQVAI 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+Y + + + P++ + + +L +P+ ++ I IV+I +++
Sbjct: 241 TYALAFLPPAFSSLTLLLQPVVAALLAWVLLSEPVGLMQAIGGAIVLIGILI 292
>gi|298245387|ref|ZP_06969193.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297552868|gb|EFH86733.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 320
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 87/288 (30%), Gaps = 12/288 (4%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A +LWG+ + L + L V R S + + + G + +
Sbjct: 8 LAILLASVLWGLNFCTVKILVMYLPPLLVGFLRFFLSTLVMMAMLKWMEGNVKVAWRDFG 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
GML F A + +G + S + L + L
Sbjct: 68 ALVVAGMLGFGAQQICFLYGSYFAEASMGALL--SAFTSAIMTLVASLVARERMTGLMIG 125
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS---------AYCFARKTIPVGSSEGFF 197
++AA ++ +++ G + I + R+++ SS
Sbjct: 126 GLLAACGGMVLVVLGKGSLGAITPASWIGLGLYFVAGLLSGLMPLLTRRSLTRYSSLRVT 185
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + L + ++YG+ R +
Sbjct: 186 TWTLFVGGVFFIIPGGMNVQNAHISVLPPVVIPALLFTAIGATAVTNMCWNYGLARVGVV 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ I Y +L ++ + +L + + + + + + ++V + +
Sbjct: 246 RLSIYGYLPSILGVLMAAALLGEMLTPAQWLGTALTMGGVLVSQIKGL 293
>gi|298252922|ref|ZP_06976716.1| drug/metabolite transporter (DMT) superfamily permease [Gardnerella
vaginalis 5-1]
gi|297533286|gb|EFH72170.1| drug/metabolite transporter (DMT) superfamily permease [Gardnerella
vaginalis 5-1]
Length = 358
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 82/292 (28%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
++ ++G WG ++ L VS L++ R + + +F
Sbjct: 63 STNAILVGIFLTLLGGAFWGANATVSKILMSTYRVSPLQIACVRQI-AAGMLFVITAAAC 121
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + M + + + ++ + + + + +
Sbjct: 122 TPKQLSGAVKTGRTWISMAITGIVCVLLTQVSYLCTIDWTNSGTATVLQSLNLLFVLVYA 181
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTI 188
+ + I +L +M + L +A S A +
Sbjct: 182 CFHTRRVPTMRETIGVVLAFAGTALMATGGNLSSLSLPVMGLLWGLADAASTAALAIMPV 241
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G + I + ++ L LF + +F
Sbjct: 242 KLIAKWGNLTVNGITFIISGCIMLPFVRPWETMPALDLRAMLLFAFTVIAGTFGAYWLFL 301
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI R ++ + P+ +++V + FG++ + M++
Sbjct: 302 EGIMRVGSVRGTLLGASEPVTAAITAVMFTGAVFSWADFVGFGLIFVMMILL 353
>gi|293607278|ref|ZP_06689619.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292814370|gb|EFF73510.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 297
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 79/288 (27%), Gaps = 13/288 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S + G + A +L G T + ++ + + + R +LP + L
Sbjct: 3 SNGKVRGYACLSAAMVLVGSTVVASKIIGAGMPPFTATALRFAMALPCFALLMAITGARL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + ++ + + I L P++S + +
Sbjct: 63 PRLCV----RDGLLLVAQAIAGSVGYTTLLIAGLQRASAVDGGIILGTLPLVSAAIAMLL 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPV 190
L+ER + A L + + +M G + AV
Sbjct: 119 LRERPGRATLAAIALAAIGVWLMARGGGDADAPQSWLGNALILGAVICEGLFILLNKRLR 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + F V+ + + + F ++ G
Sbjct: 179 VPVPPLALSTLMTGFGLAFSVLASMSEAPWSLSFSSDAMLAVGYYALVPTVGGFLLWYAG 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
R + + AP ++ + +L + + + V+ ++
Sbjct: 239 SARVAGAEAALFTALAPASAVLLAATVLGETVTPAQAAGMACVLAGVL 286
>gi|237785361|ref|YP_002906066.1| putative RarD protein [Corynebacterium kroppenstedtii DSM 44385]
gi|237758273|gb|ACR17523.1| putative RarD protein [Corynebacterium kroppenstedtii DSM 44385]
Length = 252
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 124/249 (49%), Gaps = 4/249 (1%)
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
+ +++ LL+ + + +A ++AV+WG +I A+ + + YF+
Sbjct: 1 MLAIVLFSGQFKKLLRIPWR---VWATVFAAAVLIAVNWGTYIVAVNSDHVADAALGYFI 57
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-AIAVTWSAYCFAR 185
P++SV LG FL ERL LQ ++ + ++++ ++T+ G P + A+A ++ Y +
Sbjct: 58 NPLVSVLLGVFFLAERLRPLQWLSVGIAVVAVAVLTVDLGHPPVISLALAFSFGFYGLLK 117
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
K +P+ E +A A+ Y++ G F I TL L+ G++ +
Sbjct: 118 KRVPLTPMISLTCETLCIAPVAIVYLLILGQRHEGTFTTEGIGHTLLLMTAGIVTAVPLL 177
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+F Y ++ L+++G+++Y P+L ++ +VF+ ++ R + F I+ I++ ++
Sbjct: 178 LFGYAAQQISLTSLGMLQYLTPVLQMLWAVFVTQESFSLGRWLGFIIIWISVGFFVTDLA 237
Query: 306 INSGKNKTK 314
+ S K +
Sbjct: 238 LISRKRAHR 246
>gi|209695113|ref|YP_002263042.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
gi|208009065|emb|CAQ79297.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
Length = 298
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 85/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F A +W + ++ + + +R L++L + V L
Sbjct: 3 LFFPITAVFIWAANAVVSKLATGAIEPGAIAFYRWLFALFILLPFCVKPVWQQRQLIV-- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + ++ + ++ YA T + + P+ S+FL L ++L
Sbjct: 61 --KHLGKLAILASLGMVLNQCLAYYAAHTTSATNIAVFLSLMPLFSLFLAVPLLGKQLKQ 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+I A++ LL M GI + ++ AY +
Sbjct: 119 QALIGAVISFSGLLYMLSEGSPVSLLTKGIQQGDSLMFISSLAYALYSILLNKWKLPLKP 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I + + + + L + + G++R +
Sbjct: 179 WTSVFCQITIATLLQLPLLLSSNSYAITTTAFPMVLFAAAFASVLAPWFWLKGVQRIGAA 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ ++ S+ L Q I G V I +++
Sbjct: 239 QATLFMNLVPIFTVLISLLFLGQSPTVYHLIGGGFVFIGLLL 280
>gi|72134617|ref|XP_797492.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115928585|ref|XP_001179846.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 453
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 95/314 (30%), Gaps = 19/314 (6%)
Query: 10 YSKGLSKENA-SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGV 67
+ +SKE+A S+ G + ++ + L L V EV+ ++ L
Sbjct: 112 DNDSVSKESACSIDRYKGVALALLSTVILSFSTLTVALLSGRVLSNEVVFAQMFVELLFC 171
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
KA+ +++F A + ++ +A + +
Sbjct: 172 LPLATL------ERVTVFLPRKALSLVLFRAIMGSIGTSLAFFAFQVMPIGNAKAIIYCS 225
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCF 183
PV + F +FL E + II + L + ++++ G + + +
Sbjct: 226 PVFTGFFSCIFLHEACTAVDIILSALTLSGVILVIQPPFIFGGESSSTSILGPIFCLILA 285
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG-------EHFFLGNIPDTLFLIGY 236
A I + + +++ E D + L+
Sbjct: 286 AMVGIVFITLRKIGSYRIHPVVILIYFSSIGMVLSAVLATALREWVIPQCGRDRILLLLT 345
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
G + ++ K + V ++ L V + + + ++V +
Sbjct: 346 GTFQFMSQIALTLALRYEKATIVSLIRTCDVLFTFVLDYLFFQIIPNGITITGALLIVGS 405
Query: 297 MVVYLLPTVINSGK 310
+V L + K
Sbjct: 406 LVGITLRKWWSEKK 419
>gi|260466979|ref|ZP_05813161.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
gi|259029276|gb|EEW30570.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
opportunistum WSM2075]
Length = 302
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 89/295 (30%), Gaps = 7/295 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G + V C+ ++ +T + T+ + L +I R + +++
Sbjct: 13 ERTLGIVLVSCSAAVFALTGVLTKSI-HADPLTIICWRGFVGSILISLYVLWRRHRSGGR 71
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + A A+ FI A + Y P + L V +E
Sbjct: 72 E----SLRLGWRGWLLAVEGALASIAFISAFKFTFVANVTVIYATAPFATALLAWVLTRE 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++AA + + + IM S + + + + + +
Sbjct: 128 PFRMQTMLAAAVSLCGVAIMVWSSFGTGNLFGDGLALLMTIGSGLYMIMVRAFRDTPVVW 187
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A+ A V F L G S + ++ G + + G+
Sbjct: 188 AGAVSAFLLFVLGWFVTDPLAVSPRDAVLLVTFGASFALSSIL--WTEGARLIPAAESGL 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ I+ + L + + IV+ A+ + + + +T +
Sbjct: 246 LGSAEVPFAILFAFLFLGEIAPAASLVGGAIVLCAVFAHAGRDWLAARGQRTASN 300
>gi|228944571|ref|ZP_04106941.1| Transporter, EamA [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228815031|gb|EEM61282.1| Transporter, EamA [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 320
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|182419636|ref|ZP_02950881.1| permease, DMT family [Clostridium butyricum 5521]
gi|237666014|ref|ZP_04526002.1| permease, DMT family [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376526|gb|EDT74103.1| permease, DMT family [Clostridium butyricum 5521]
gi|237658961|gb|EEP56513.1| permease, DMT family [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 298
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 83/290 (28%), Gaps = 11/290 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G V +LWGI+ QFL + S ++ R+L S + Y S
Sbjct: 6 RTKGIFLVIIGTMLWGISGTVAQFLFQNKGFSPEWLVVIRLLSSGTILLLY-GYISSDND 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + +FS + + A+ + +++PVI V
Sbjct: 65 IKIIWKSKNNRINLFLFSILGMLGVQYTYFAAISHGNAATATILQYLSPVIITSYLIVKN 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVGS 192
K+ Q+ A +L ++ + I L I+ + + + I +
Sbjct: 125 KKLPTLKQMFAIILAMVGTFFIITRGNIHSLSLSKLALFWGISSAICSAIYTLQPISLLK 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + + F + +K
Sbjct: 185 QFSSTAVVGWGMLIGGLFFSFIHSPFKFVGTWSLSSVLSLIFVIIFGTVIAFYCYLESLK 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ I+ PL SV L P I ++ +++
Sbjct: 245 YLVPTEASILGCIEPLSATFLSVIWLNVPFTFYEFIGTTCIIATVIILSF 294
>gi|149915284|ref|ZP_01903812.1| homoserine O-succinyltransferase [Roseobacter sp. AzwK-3b]
gi|149811005|gb|EDM70844.1| homoserine O-succinyltransferase [Roseobacter sp. AzwK-3b]
Length = 284
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 91/284 (32%), Gaps = 9/284 (3%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + + + + ++ E++ +R L L V ++
Sbjct: 1 MLGAVVSFSAMAVGGRSVSFELDTFEIMMYRSLIGLTLVVLVAWATGAHRTITGRKPGLH 60
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+L FS L + YA+ F +P+ + L + L E L ++I
Sbjct: 61 LLRNVLHFSGQNL------WFYAITVIPLAQVFALEFTSPLWVLILSPLVLGEHLTRVRI 114
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+AA + +LI+ S + +A +A FA + C+L L
Sbjct: 115 LAACIGFAGILIVARPSPDTINFGTLAAMCAAIGFAGSILVTKRLTRTETLTCILFWMTL 174
Query: 209 F--YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
L + +L + + A + V +++
Sbjct: 175 SQSIFGLLCAGFDGDIALPSAQSLPWLAVIACGGLMAHFCLTTALAMAPATLVSPVDFMR 234
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L+ V + I +PIDT+ ++ A + + +
Sbjct: 235 LPLIAVIGLMIYDEPIDTLTIAGALVIFGANYLNMWSETRQGRQ 278
>gi|291535408|emb|CBL08520.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Roseburia intestinalis M50/1]
Length = 321
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/309 (9%), Positives = 78/309 (25%), Gaps = 18/309 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ T ++ + +WG + Q + R + + + +
Sbjct: 1 MNNKTTRNSILLLVTAAVWGAAFVAQTVGGQTIGAYSFNCVRCIIGALVLIPVMKFLDKK 60
Query: 78 ---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + L + +L + ++ V +
Sbjct: 61 DLSPRKPQTKEDYKLLIKGGICCGVALCISTNLQQVGILMGASAGKAGFLTAVYILLVPI 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+FL ++ A L ++ L + + + + A F+ + + V
Sbjct: 121 LGLFLHKKCGINIWFAVALALVGLYFLCMQDKNGFQPADLLLLCCALGFSIQILFVDYFS 180
Query: 195 G--------------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + +G FL L +
Sbjct: 181 PKVDGVRLSMIQFLVTGLLTAIPMFTVDMQHSISGIEAWASAFLSWSAWVPILYAGIMSC 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + G + ++ + V IL Q + + ++ A+++
Sbjct: 241 GVGYTLQIIGQNGLNPTVASLIMSLEAVFSAVFGWLILGQKLSIKEILGCCLIFSAIILA 300
Query: 301 LLPTVINSG 309
LP +
Sbjct: 301 QLPVQRKAK 309
>gi|239816992|ref|YP_002945902.1| hypothetical protein Vapar_4022 [Variovorax paradoxus S110]
gi|239803569|gb|ACS20636.1| protein of unknown function DUF6 transmembrane [Variovorax
paradoxus S110]
Length = 325
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 78/297 (26%), Gaps = 8/297 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+++ S + G V A + T+ V +L + R + ++
Sbjct: 27 TRDLESERILAGIGMVLVAVACFATLDTATKTSTAAVPILMGVWFRYAFQAVATTAVLLP 86
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G L + +L V +L + + P++
Sbjct: 87 RHGTALLRTQHPRYQLLR------GALLLVSSTLAFLSLRYMPLAEFTSIVLIAPLVITL 140
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L + LKE+++ L+ + L++ G + A +
Sbjct: 141 LAATTLKEQVSALRWVLVAGGFAGTLVILRPGGDAFSWAVLLPIGLVLTNAWFQVLTSKL 200
Query: 194 EGFFIE-MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ + L + L G + + I +
Sbjct: 201 AQTENPLTMHFYTGWVGALIASLALPFVWTALPSWHWWALLCLMGFMGTVGHFILILAYQ 260
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
RA ST+ Y ++ + D I ++ + TV
Sbjct: 261 RAPASTLTPYLYAQIAFAMLGGWLVFSHVPDRFSLIGMSMIAVCGAAGAWLTVRERR 317
>gi|157691120|ref|YP_001485582.1| DMT superfamily drug/metabolite transporter [Bacillus pumilus
SAFR-032]
gi|157679878|gb|ABV61022.1| DMT superfamily drug/metabolite transporter [Bacillus pumilus
SAFR-032]
Length = 304
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 93/291 (31%), Gaps = 20/291 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G + L+ + LE + +++++HR S + + L
Sbjct: 7 KAYAAAIGYATIIGFSFLFVKIALESANPIDLLAHRFTVSFAAALLLFPFLRKKIRLSIQ 66
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ ++ FS + + F ++ L+ P++++ L + FLKER
Sbjct: 67 W---RDLLYIVPFSLLYPVLFFAFQVWGLMYTSSSEAGIIQATIPILTMVLAAWFLKERA 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q++ +L + ++++ + GI + + A + +
Sbjct: 124 TWIQVLFTILSVCGVMLLFVMKGIDVKHSHMIGYVLILLSALSSSAYSVFARVITRRFHV 183
Query: 204 AIPALFYVVWNGFSG----------------GEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ F L L + +
Sbjct: 184 IELTFVMTFFGFIFFNAAALIRHSVNGTTLQFFSPFTQPSFVWSMLFLGILSSLLTAYLS 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+Y + + + + V I + + + + V IL + ID I +V+ ++
Sbjct: 244 NYALSQLEAAKVSIFNNLSAFITVAAGVLILHETIDWYHLIGGVLVIGGVI 294
>gi|241896648|ref|ZP_04783944.1| DMT superfamily drug/metabolite transporter [Weissella
paramesenteroides ATCC 33313]
gi|241870129|gb|EER73880.1| DMT superfamily drug/metabolite transporter [Weissella
paramesenteroides ATCC 33313]
Length = 300
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 88/295 (29%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G F+ ILWG + Q L +S + R+L + + Y
Sbjct: 1 MAKNKGLFFIIVGGILWGASGTCAQILLHDTGLSTYWLTGMRLLCAGI-LLLIYSYLHTH 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
S+ A +L+FS + + A+ + F+ P+ + +
Sbjct: 60 QSIFTIWRSPKMASQLLIFSFIGMLPSQLAYFMAIKYGNAATGTILQFLGPIFILLFLII 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + + I++ LL L ++ I L+L+I+ G
Sbjct: 120 RWRLKPSRTDILSVLLAFLGTFLLVTQGNITQLALSISAIVWGILSGLSQAFYKILPGKL 179
Query: 198 I------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + A+ + + + + + +
Sbjct: 180 LKSYATELITGWAMLLGSIPFLPLLTSHAMPTFSLNSWLEIIFIIVFGTAIAYLFYLSSL 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
K +T ++ PL +V L P + V+ + +++ + L
Sbjct: 240 NYLKPTTTSMLSAFEPLTATFLAVVFLGTPFNLVQILGGVLIIGVTFLQALSARK 294
>gi|256395140|ref|YP_003116704.1| hypothetical protein Caci_6006 [Catenulispora acidiphila DSM 44928]
gi|256361366|gb|ACU74863.1| protein of unknown function DUF6 transmembrane [Catenulispora
acidiphila DSM 44928]
Length = 315
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 85/300 (28%), Gaps = 22/300 (7%)
Query: 22 PTMMGTLF---VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P G L + +WG T L + + V VL+ + R + +
Sbjct: 25 PRRSGMLATAGLLATTAVWGSTFLVVKDAIVSVPVLDFLGLRFAVACVAMLAV------- 77
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
V +LA + + L T ++ F + V + +G+V
Sbjct: 78 -RPRALAALGRSGWRHGVLLGLVLAGGYTAQTFGLQTASASVSGFITGLFVVFTPLIGAV 136
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTI 188
L+ R+ +A +L + L ++ LH + ++ +
Sbjct: 137 VLRRRVPPTVWVAVVLATVGLGLIALHGLSIGRGELLTVGGAFFFALHIVGLGEWSHRHD 196
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + +++ + L + F + +
Sbjct: 197 AYALAVVQIGTVAAVSLLLALAGDTEHGRHTLTLPPDTAGWAAVGVTALLGTAAGFFLQT 256
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ R + ++ P+ V+ V + + I +V+ AM L
Sbjct: 257 WSQARMPATRAAVVLTMEPVFAGVTGVLA-GETLAVRGWIGAALVLAAMYAVELGPRRQR 315
>gi|225011842|ref|ZP_03702280.1| protein of unknown function DUF6 transmembrane [Flavobacteria
bacterium MS024-2A]
gi|225004345|gb|EEG42317.1| protein of unknown function DUF6 transmembrane [Flavobacteria
bacterium MS024-2A]
Length = 272
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 97/273 (35%), Gaps = 8/273 (2%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + + + ++L LE++ R + SL F + +K +
Sbjct: 1 MLLSTFSFALMNALVKYLVDYPTLELVFFRSIGSLAITFSFL--------KVKGIPQWGN 52
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+L+ + + F + + +V+P+ + L FL+E + +Q +
Sbjct: 53 QKKLLILRSLVGVTSMVLFFWGVHYITIGSAVTLRYVSPIFAALLAVFFLREVIKPIQWL 112
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
++ + + ++ + V +A+ A I + + V+ L
Sbjct: 113 FFIMAFVGVFLIKSYDTSGSNFGVFLVLLAAFFSAIVYILLSKIGKGDHPVVVVHYFMLL 172
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ G ++ I D L+ GL F + + + V +Y L
Sbjct: 173 ATIVGGIGSFFNWVTPTITDLFLLLSLGLFGFFGQLFMTKAFQNGEAHMVAPFKYIEVLF 232
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ VF+L + D + + +V+ +V+ +L
Sbjct: 233 TLLFGVFVLSESYDFLHLLGTFLVIFGLVLNVL 265
>gi|218262480|ref|ZP_03476932.1| hypothetical protein PRABACTJOHN_02610 [Parabacteroides johnsonii
DSM 18315]
gi|218223348|gb|EEC95998.1| hypothetical protein PRABACTJOHN_02610 [Parabacteroides johnsonii
DSM 18315]
Length = 305
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 96/300 (32%), Gaps = 17/300 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L+ A +G+ PL++ V + ++ +R + V +
Sbjct: 2 KVKGFLYGLIASATFGLIPLFSIPALENGVGLDSLLFYRFSLASVLVAVLM------WMK 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G+ T+ A+ + A L + + +F+ PV+ + VF K
Sbjct: 56 KIPFDIQKDEFGIAFILGTLYAITALWLTEAYLYIPSGVATTIHFLYPVVVSLIMFVFYK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVG 191
++L ++A + + + +++ + G+ L+ + + ++
Sbjct: 116 DKLTMPILLAMAMAVSGVYMLSGGNTPGGSINMKGLMLVLATVVAYATYIVGMNRSRIAR 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+L+ +F + L+ L I
Sbjct: 176 LDSLKATFYILLSGAIVFLINLAIKGDLPDPMPNLDTTIDVLMVAFLPTLVSDLTLILAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +T I+ PL + V L + + ++ +V+ A+ + + + I
Sbjct: 236 RYIGSTTTAILGCMEPLTAVCMGVLFLGEHLQPMQIGGIVVVLSAVCIVISGSYIRKWMR 295
>gi|311070626|ref|YP_003975549.1| hypothetical protein BATR1942_18505 [Bacillus atrophaeus 1942]
gi|310871143|gb|ADP34618.1| hypothetical protein BATR1942_18505 [Bacillus atrophaeus 1942]
Length = 306
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 82/297 (27%), Gaps = 11/297 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S G V ILWG++ Q+L + +V + R+L S + Y
Sbjct: 9 SHSRTKGIALVLTGSILWGVSGTVAQYLFQQQHFNVEWLTVVRLLLSGILLLGLA-YRKE 67
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + +++F + + A+ + ++ P + +
Sbjct: 68 KQRIWAVWKDKTDGLNLVLFGILGMLSVQYTYFAAIQHGNAATATVLQYLAPALITCYVA 127
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIP 189
+ K ++IA L I+ + H L ++ ++ +
Sbjct: 128 IRSKRLPTVKELIAVFLAIIGTFFLVTHGDIHSLSISGWALFWGLSSAFALAFYTLHPHK 187
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + G I + + + + F +
Sbjct: 188 LLAKWGAAIVVGWGMLIGGLGLSLIHPPWKFEGQWSVSAYAAVIFIVLFGTLTAFYCYLE 247
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+K S ++ PL SV L + ++ +++ +
Sbjct: 248 SLKYLTASETSLIACAEPLSAAFLSVIWLHVTFGISEWLGTCCILSTIMILSIKEKK 304
>gi|297194344|ref|ZP_06911742.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297152237|gb|EDY64909.2| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 322
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 78/283 (27%), Gaps = 14/283 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A ++W + + ++ L V ++ R W + A
Sbjct: 37 GLLLAAVATVVWSGSFVTSRALHDSVPPVQAAFWR--WVVAIAAVAPFAARQTWRQRALV 94
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
++ + + + + + + + L RL
Sbjct: 95 RRHLGFLTVAALLGVTV---YNTLVNQAGLTTSAANMGMIMAASPVLMALYERLSGARLG 151
Query: 145 HLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+II ++ +L++ G + A + R+
Sbjct: 152 ARRIIGTVVACCGVLLLVGDGSLSFSFAPGDLWMFAAALSFATYSALLRRRPDGLGGPVL 211
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
VL L + F + ++ F ++ I
Sbjct: 212 LFTTFVLGALMLLPAQLVSLTVQGGFEPSAGTVGPLVYVGVFSSAVAFFAWNRAIALIGA 271
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ Y P+ + + S +L + + + + +++ + +
Sbjct: 272 AGAGVVYYLQPVCVALLSYALLGERTGSAQVVCMALILGGVAL 314
>gi|296327578|ref|ZP_06870124.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|296155404|gb|EFG96175.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 282
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 89/280 (31%), Gaps = 13/280 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+++F A I +G+T + T+ L+ + +IS R L + + K
Sbjct: 9 IYMFIATIFFGMTYVLTKICLKYSTEFHIISFRFLIAFVVSLIFL--------QKKIFPV 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +L + + + SF ++ + F F KE+
Sbjct: 61 KRTEFLYSLLLGALLFLVFIAMTIGVKYTTATNASFLISLSVIFIPFFSWFFNKEKPKKR 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----GFFIEMCV 202
+ ++ ++ ++++TL + I A F I + +
Sbjct: 121 IFVVLIIALIGIILLTLDKNLEFHMGDILCLICATLFTFYVIMTEKIVKNNNPTALGVLQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
LF + ++ +F + + K + VG +
Sbjct: 181 FGWVFLFSFLVQYPIESFVIPKNKFFWLSMVLLGIFCTAFGYIAQTIAQKNLSSTVVGFI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+ + F L + + + I +++I+++ +
Sbjct: 241 LSLEPVFSGIFGYFFLNEYLSFQQYIGAFLLLISVIYVSV 280
>gi|293605124|ref|ZP_06687516.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292816527|gb|EFF75616.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 300
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 104/297 (35%), Gaps = 11/297 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + A +L G ++ S V+ R L+ +F LLK
Sbjct: 7 RLGLAQMASAMVLSGTLGVFV-LESGQSAWNVVFFRCLFGALSLFLYCWA----RGLLKP 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K + + + + L ++W A L + Y V P + LG +FL ER
Sbjct: 62 GLFTAKTLALTLVAGAALVMNWVLLFSAYRLASISLATAVYNVQPFFLIGLGVLFLGERP 121
Query: 144 NHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ +++ LL++ G L+ + +A + + V +G
Sbjct: 122 SRGKLAWSVVAFAGLLLVLRLTETHGAGGQTYLAGLLLGLGAAALYGVTAVIVKRLKGIP 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L+ L V+ + + + + ++ + I++ +
Sbjct: 182 PQVLALSQVTLGAVMLLPMADFNALPAAPLQWAYLVALGLVHTCLMYILMYSAIQKLPTT 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + P + I+ + + ++ V+ + ++ +A L + +
Sbjct: 242 STAALSFIYPAVAIMLDLLVYGHRMEPVQVVGVAMIFVAAAGVSLNWTWRLPGRRPR 298
>gi|302534436|ref|ZP_07286778.1| integral membrane protein [Streptomyces sp. C]
gi|302443331|gb|EFL15147.1| integral membrane protein [Streptomyces sp. C]
Length = 319
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 82/284 (28%), Gaps = 14/284 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G L A ++W + + T+ + V ++ + R + + V
Sbjct: 35 LGVLLALVATVVWSGSFVATRGMADTVPPVQAVFWRWIIAAVAV--TPFAARQAWQQRAL 92
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ + + L + ++ + + L + ERL
Sbjct: 93 LRKHLGYISLATLFGVTL---YNTLVHQAGLTTSASNMGMIMAASPVIMALYARLGGERL 149
Query: 144 NHLQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LL +L++ +G + A + ++
Sbjct: 150 GARRSCGMLLAAFGVLLLVGDGSLGFDFGAGDLWMFGAALSFATYSALLKRKPAEIGGLA 209
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F + VL L + F L ++ F ++ I
Sbjct: 210 FLLSTFVLGALMLAPAYAVSLTVQGGFEATPHTVGPLLYVGVFSSAVAFFAWNKAISLIG 269
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G++ Y P+ + V + +L + + + +++ +
Sbjct: 270 AARAGVVYYLQPVCVAVLGLLLLGERTGPAQLLCMALILGGVAF 313
>gi|149915353|ref|ZP_01903880.1| hypothetical protein RAZWK3B_05042 [Roseobacter sp. AzwK-3b]
gi|149810642|gb|EDM70483.1| hypothetical protein RAZWK3B_05042 [Roseobacter sp. AzwK-3b]
Length = 288
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 5/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T +G + + ++ + ++ L +VL V+ R + V +GG
Sbjct: 2 TEQNTRLGIMLMVATTFIFAVQDGISRHLAGEYNVLMVVMIRYWFFAAFVIAVAARKAGG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L T + + T + V I+ + + P++ L
Sbjct: 62 LRAAARTEQPLMQGFRALLLVTEICV----MIFGFTMLGLVESHAVFACYPLLIAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER+ + +A + + + I+ A +A FA +
Sbjct: 118 VLGERVGWRRWVAIGVGFVGVTIILKPGFGVFQIEAAVPLMAALMFALYGLLTRYVARKD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V G + + PD +++ + + + A+ S
Sbjct: 178 SAATSFFWTGTVGSVAMTAVGLWFWEPMSRPDWVWMAALCVTGALGHYTLIKCYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+V Y + + + + I+ + ++V A + L
Sbjct: 238 SVQPFAYLQLVFASTLGILVFSETIEMNVALGAALIVGAGLFTLWRQRQAR 288
>gi|53716663|ref|YP_105102.1| hypothetical protein BMAA0290 [Burkholderia mallei ATCC 23344]
gi|53722812|ref|YP_111797.1| hypothetical protein BPSS1793 [Burkholderia pseudomallei K96243]
gi|76818853|ref|YP_336033.1| hypothetical protein BURPS1710b_A0875 [Burkholderia pseudomallei
1710b]
gi|124382395|ref|YP_001025467.1| hypothetical protein BMA10229_1667 [Burkholderia mallei NCTC 10229]
gi|126444238|ref|YP_001063566.1| multidrug ABC transporter permease [Burkholderia pseudomallei 668]
gi|126445853|ref|YP_001077527.1| hypothetical protein BMA10247_A0322 [Burkholderia mallei NCTC
10247]
gi|126457076|ref|YP_001076468.1| hypothetical protein BURPS1106A_A2437 [Burkholderia pseudomallei
1106a]
gi|134278475|ref|ZP_01765189.1| putative membrane protein [Burkholderia pseudomallei 305]
gi|167724642|ref|ZP_02407878.1| hypothetical protein BpseD_36824 [Burkholderia pseudomallei DM98]
gi|167743595|ref|ZP_02416369.1| hypothetical protein Bpse14_36316 [Burkholderia pseudomallei 14]
gi|167820780|ref|ZP_02452460.1| hypothetical protein Bpse9_36991 [Burkholderia pseudomallei 91]
gi|167829141|ref|ZP_02460612.1| hypothetical protein Bpseu9_35973 [Burkholderia pseudomallei 9]
gi|167850614|ref|ZP_02476122.1| hypothetical protein BpseB_35559 [Burkholderia pseudomallei B7210]
gi|167899212|ref|ZP_02486613.1| hypothetical protein Bpse7_36090 [Burkholderia pseudomallei 7894]
gi|167915892|ref|ZP_02502983.1| hypothetical protein Bpse112_35770 [Burkholderia pseudomallei 112]
gi|167923731|ref|ZP_02510822.1| hypothetical protein BpseBC_34566 [Burkholderia pseudomallei
BCC215]
gi|217422354|ref|ZP_03453857.1| putative membrane protein [Burkholderia pseudomallei 576]
gi|237507316|ref|ZP_04520031.1| membrane protein [Burkholderia pseudomallei MSHR346]
gi|238561491|ref|ZP_00441932.2| membrane protein [Burkholderia mallei GB8 horse 4]
gi|254177268|ref|ZP_04883924.1| putative membrane protein [Burkholderia mallei ATCC 10399]
gi|254184887|ref|ZP_04891476.1| putative membrane protein [Burkholderia pseudomallei 1655]
gi|254186112|ref|ZP_04892630.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237]
gi|254194056|ref|ZP_04900488.1| putative membrane protein [Burkholderia pseudomallei S13]
gi|254264348|ref|ZP_04955213.1| putative membrane protein [Burkholderia pseudomallei 1710a]
gi|254301167|ref|ZP_04968611.1| putative membrane protein [Burkholderia pseudomallei 406e]
gi|52213226|emb|CAH39269.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|52422633|gb|AAU46203.1| putative membrane protein [Burkholderia mallei ATCC 23344]
gi|76583326|gb|ABA52800.1| putative membrane protein [Burkholderia pseudomallei 1710b]
gi|126223729|gb|ABN87234.1| putative membrane protein [Burkholderia pseudomallei 668]
gi|126230844|gb|ABN94257.1| putative membrane protein [Burkholderia pseudomallei 1106a]
gi|126238707|gb|ABO01819.1| putative membrane protein [Burkholderia mallei NCTC 10247]
gi|134250259|gb|EBA50339.1| putative membrane protein [Burkholderia pseudomallei 305]
gi|157810971|gb|EDO88141.1| putative membrane protein [Burkholderia pseudomallei 406e]
gi|157933798|gb|EDO89468.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237]
gi|160698308|gb|EDP88278.1| putative membrane protein [Burkholderia mallei ATCC 10399]
gi|169650807|gb|EDS83500.1| putative membrane protein [Burkholderia pseudomallei S13]
gi|184215479|gb|EDU12460.1| putative membrane protein [Burkholderia pseudomallei 1655]
gi|217394585|gb|EEC34604.1| putative membrane protein [Burkholderia pseudomallei 576]
gi|234999521|gb|EEP48945.1| membrane protein [Burkholderia pseudomallei MSHR346]
gi|238524458|gb|EEP87891.1| membrane protein [Burkholderia mallei GB8 horse 4]
gi|254215350|gb|EET04735.1| putative membrane protein [Burkholderia pseudomallei 1710a]
gi|261826780|gb|ABM98926.2| putative membrane protein [Burkholderia mallei NCTC 10229]
Length = 306
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 66/279 (23%), Gaps = 6/279 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + L + R L + + + + +
Sbjct: 21 IWGSAFVAQRLSLAVIGPFLFTGLRFLLGAAVLVPLLCANGAARAHCATLARERTRLLPG 80
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +LAV L + F + V+ +G F + ALL
Sbjct: 81 LALGGLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPVIGVFFRHRT-GIGTWLGALLA 139
Query: 155 ILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L ++ A+ V + + +
Sbjct: 140 AIGLYFLSVDAHFSMLYGDWFQLAGAIVIAFHVIAVGHLVRRHDPLVLSFMQFVVCGALC 199
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ L G L + + + A + ++ +
Sbjct: 200 LALGLAIEPLDRATLTRALPTLLYGGLLSVGVGYTLQVVAQRDAAPAHAAVIFSMEGVFA 259
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ L + + +++ ++V L
Sbjct: 260 AIAGWAALGETLSLRALAGCALMIAGLLVCQLLPGHARR 298
>gi|186686010|ref|YP_001869206.1| hypothetical protein Npun_F5972 [Nostoc punctiforme PCC 73102]
gi|186468462|gb|ACC84263.1| protein of unknown function DUF6, transmembrane [Nostoc punctiforme
PCC 73102]
Length = 643
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 91/299 (30%), Gaps = 13/299 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV 72
L ++ + P ++GT + A I + P T+ + ++ V+ HR + +
Sbjct: 330 LKQQFSETPALLGTASLLFALIPISLAPSLTKLCQQEIGANAVVFHRSWIATIVFALWNL 389
Query: 73 Y-----FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+++ + V +L+ T + + ++L + +
Sbjct: 390 LEAFRSQQSENEPIENEPFTSQEVWLLLAMGTSAGTYLLLWAWSLSQTSVANVALLSNLN 449
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-------TWSA 180
+ G V R ++ +I ++ + + L+ + + A
Sbjct: 450 SLFVALAGYVLFGRRFDNRFVIGLVIALAGAIAFELNKVQFATDQILGDTLALLTAIFMA 509
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
C I + + +F + F +
Sbjct: 510 TCMLLIERLRTRFSTATIMLWRCGVTTMFLLPVLPFLEDRLLPYSWTGWFFIIFQALFCQ 569
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +Y + R S V + P+L + + FI + + F +V++ + +
Sbjct: 570 VLGQGLLAYSLSRISSSVVAVTLLLEPVLASIFAWFIFSEQVGLFDWATFAVVLVGIYL 628
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 92/295 (31%), Gaps = 13/295 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N S + +F ++ + E Q+S + +R+ + Y +
Sbjct: 2 NVSNQRKIALAALFVGVGAISFGSIFVKLSETQLSPNATVFNRLWLASVFFLLWHGYKAI 61
Query: 77 GLSLLKDTLKNPKAV-----GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
L D + + +L + A ++L ++S + + P+ +
Sbjct: 62 RQRLSLDKPEEQQLYTSQDLWLLGSAGIFWAGTLVLLAWSLTETSVAISSVLHNLAPIFT 121
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFA 184
+ ++ +I ++ + + + + ++ + +
Sbjct: 122 SLGVWLLYRKSFESQFLIGMVIALGGAIAIEFEELQIATDEVQGGFAAIVSAIFLSGYLL 181
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
I++ + AI AL + F+ + F + +
Sbjct: 182 IVEKLRTKFSPATIQLWISAISALIILPILLFTQDQLFPSTTSGWLWVISLALICQVLGH 241
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +Y + + V ++ P+ + ++ I + + + F +V++ + +
Sbjct: 242 GLLTYCLAKFSSVVVSLVHLLEPVFSGIFALIIFSEKLTFSNWVGFAVVLMGLYL 296
>gi|311105584|ref|YP_003978437.1| hypothetical protein AXYL_02401 [Achromobacter xylosoxidans A8]
gi|310760273|gb|ADP15722.1| hypothetical protein AXYL_02401 [Achromobacter xylosoxidans A8]
Length = 312
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 49/317 (15%), Positives = 105/317 (33%), Gaps = 21/317 (6%)
Query: 14 LSKENASLPTMMGTL--FVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFA 70
++ + G + + WG + + + VS + I R + V
Sbjct: 1 MNGPKPLRQPLDGLATGAMLLLCVCWGFQQIAIKLVAADVSPIMQIGLRSAF-AALVLAV 59
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
V+ GL D P + L+F+ L V G F Y
Sbjct: 60 AVWRREGLRAFTDGTALPGLIVGLLFAGEFLFVAQGLVYTTASHMSV----FLYTAPIFA 115
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------------LSLAIAVT 177
++ L + +ERL LQ + ++ + + L G P + L +
Sbjct: 116 ALGLHWLLPEERLKPLQWLGVVIAFCGIAVAFLGKGQPAGSAAAPNMLLGDAMGLLAGLF 175
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
W A A + + + +A+ A+ + + +G F
Sbjct: 176 WGATTVAIRKTSLSEAAPAKTLFYQMAVAAITLLAFAAATGNAGFRYTQAAVLSVAFQSV 235
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++ + + + ++R S + I+ + PL + V IL +P+D + +V+ +
Sbjct: 236 VVALSSYLAWFWLLRRYLASRLSILSFMTPLFGVSFGVIILDEPLDGGFVLGALLVLAGI 295
Query: 298 VVYLLPTVINSGKNKTK 314
+ ++ +T+
Sbjct: 296 TLVSGAELLREKLRRTR 312
>gi|228984020|ref|ZP_04144209.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|229154537|ref|ZP_04282654.1| Transporter, EamA [Bacillus cereus ATCC 4342]
gi|228628935|gb|EEK85645.1| Transporter, EamA [Bacillus cereus ATCC 4342]
gi|228775700|gb|EEM24077.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 320
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFSLLFSLHFNSGDLWMIAAVCIWGMYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNVGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|209552031|ref|YP_002283947.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539624|gb|ACI59555.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 315
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 85/286 (29%), Gaps = 7/286 (2%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A LW I ++++ S L +I R++ + V F+ + ++ L
Sbjct: 13 LAIALAMFLWSINFIWSKDVFTAYSPLSIIFFRLVVASVFVLGLKRAFNIREKIKREHLP 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +G F+ + + + + L + L
Sbjct: 73 RFALLSFFSPFLYFIGEGYGIFLTESTLSALIVATVPVVFPAITFILLREKISLTGIAGL 132
Query: 147 QIIAALLIILSLL------IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ A L + + +L + L + + +
Sbjct: 133 VLAFAGLAFTIVDPANLHLVYSLQGLLFLALSVGSAIAYIILAKQLLEEYRGITVVGAQN 192
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
A+ L +V+ S H L ++ + ++++ I R L
Sbjct: 193 AFAAVYYLPFVLVFDGSHILHHAPTLTTVLAILFLGVFCSALAYILYAFAIARLPLWQAN 252
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
E P+ S F L + + F IV+ + V ++
Sbjct: 253 AFENLIPIFTATLSFFWLHETLSAKDIAGFLIVIAGIAVSQWGSLR 298
>gi|209547889|ref|YP_002279806.1| hypothetical protein Rleg2_0281 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533645|gb|ACI53580.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 297
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 83/288 (28%), Gaps = 4/288 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ AS + + G +P++ + L +V + RV +L +F +
Sbjct: 7 TLSEASPSNRLALAALILGGAAIGGSPIFVR-LSEVGPMATAFWRVALALIPIFVVSLMK 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + V + LA + L + + VI+
Sbjct: 66 KHAGPKPQSLSDYGMLILPGVMLSLDLAAWHLSLTMTSVANATLLANLAPVFVTVIAFVF 125
Query: 135 GSVFLKERLNHLQIIAALLIIL---SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
++A +++ + IA + A
Sbjct: 126 FRARPSGVFLLGLVLALAGVVILKGGPAAIGNGDLGGDGIAMIAAFFYACYILAIGRLRS 185
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I + A A+F G ++ + ++ +Y +
Sbjct: 186 RFDTIRIMLWSTASAAVFIFPIALIHEGHMLPASLYGWSILFGLAFISHAGGQVAITYAL 245
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P++ + + +L + I T++ + +V+ ++V
Sbjct: 246 AYLPPAFSSLTLLLQPVVAAILAWALLNEAIGTMQALGGAVVLAGIMV 293
>gi|163855185|ref|YP_001629483.1| hypothetical protein Bpet0880 [Bordetella petrii DSM 12804]
gi|163258913|emb|CAP41212.1| putative membrane protein [Bordetella petrii]
Length = 301
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/303 (11%), Positives = 90/303 (29%), Gaps = 13/303 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + P+ L A ++W + + T+ + + +R + + + +
Sbjct: 3 DASPAPSARHMLLPLMAALIWSLNMVVTKMAASVIEPAAIGFYRWVLAALLLTPFAL--- 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L P + V A +A++ G A T + P++++ LG
Sbjct: 60 -PRVLRNWHAIAPHLGKLAVLGALGMALYQGLTYVAAATTTATNMGIITAMVPLLTIILG 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKT 187
S+ L+ER ++ L + L ++ G + + AY
Sbjct: 119 SLVLRERPAATAVLGGALSLAGLGVLLGEGDPLRLLEVGGSFGDALMGLAALAYAMYGVL 178
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + + + F L L L + F ++
Sbjct: 179 LRRWPLPIGMWQSLYVQVLFGIALQLPSFLLAPASPLNAGNIPLVLYAGIFPSLFAPYLW 238
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G++ + I P+ + + +L + + + + +
Sbjct: 239 MQGVRHLGPNRTSIFLNLMPVATVAIAAVMLGEVPHAYHVAGGLMALAGVSLAQWRPRRT 298
Query: 308 SGK 310
+ +
Sbjct: 299 APR 301
>gi|158338367|ref|YP_001519544.1| hypothetical protein AM1_5263 [Acaryochloris marina MBIC11017]
gi|158308608|gb|ABW30225.1| conserved hypothetical membrane protein [Acaryochloris marina
MBIC11017]
Length = 340
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/307 (10%), Positives = 97/307 (31%), Gaps = 12/307 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+ + +++ + A + + ++T+ E+ ++ I +R + + +
Sbjct: 31 QPASQTASILPFAALLAAVCILSCSAIFTRLSEEELTASATIFNRFWIASLALGMWSGFQ 90
Query: 75 SGGLSLLKDTLKNPKAVG----MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + ++ G + ++L ++ + +TP+
Sbjct: 91 QFRQPPAETDQTSQSIQIRDLLWFGCLGILIYGRAGSWAWSLTQTSVANSNLLHNMTPLF 150
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCF 183
+ G +FL R N ++ L I +LI+ + S + + A F
Sbjct: 151 ATLGGWLFLGHRFNRQFLMGMSLAITGVLIIGVGDFQVGTSGLVGDGAALLSAVFYAANF 210
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
I + + L + G + F + +
Sbjct: 211 LVIEKLRTRFTTTTIMLSSCVVTGLLTIPVVLVGGNQLFPTSTTVWLAVIALGVISQGLG 270
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +Y +K+ V + PL+ + + + + ++ + + F I++ + + +
Sbjct: 271 QGLLAYCLKQFTSGFVSVFMLMEPLITALLAWKVFGEQLNVLNWVAFFIILTGLYLATIS 330
Query: 304 TVINSGK 310
+
Sbjct: 331 KGAAKSR 337
>gi|149194972|ref|ZP_01872065.1| hypothetical protein CMTB2_08930 [Caminibacter mediatlanticus TB-2]
gi|149134893|gb|EDM23376.1| hypothetical protein CMTB2_08930 [Caminibacter mediatlanticus TB-2]
Length = 276
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 100/277 (36%), Gaps = 6/277 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + + A LWG + + + + RVL+ P + + + G K
Sbjct: 2 KKRGLIEMLGATFLWGSVSIMGIY-SHLPSGVFVFFRVLFGAPFILYFAIKRGGIKEFFK 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
P + S +L V+W FF +AL Y+ P+IS+ L S+FLKE+
Sbjct: 61 LKPFWPLLL-----SGIMLGVNWVFFFWALNMTDVSTVVVIYYAGPIISILLASIFLKEK 115
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L I++++L L ++I IA+ + ++
Sbjct: 116 LTIYIILSSILAFLGVIISIKGGINFSKGAFIALLAAISYGLLGFFSKIATMYHRAVSVT 175
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ F + + + +I + ++ + K+S IM
Sbjct: 176 AWQMIISIIITLPFLFLNEWHFTYVGIIIAIITGIFHTALALFLWYDALNYIKVSNASIM 235
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+Y + I + L Q D + I +++ A ++
Sbjct: 236 QYLDIVFAIGFAYLFLHQIPDIYQIIGAILIIFAGII 272
>gi|315179719|gb|ADT86633.1| protein of unknown function DUF6, transmembrane [Vibrio furnissii
NCTC 11218]
Length = 302
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 94/297 (31%), Gaps = 17/297 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
K + + + + W + + + + L + R L + +
Sbjct: 9 KSSPKSTLWVTLCLLALPPLFWAGNFIVGRSVRGDIPPLTLSFDRWLIASLVLLPFTYKT 68
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + +++ S T +A F L T P++ +
Sbjct: 69 LHREWRLYWQYRTR----IVIASITGVAAFNSFIYLGLQTTTASNALILNSFIPLLIMLF 124
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYC 182
GS+F K L+ Q + + + +L + + G ++ LA+
Sbjct: 125 GSLFFKLTLSAKQWLGMSISFVGVLSIISRGEWSVLTSLSFNQGDMIVFLAMVSWAIYTL 184
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
++ + G L + + G N + +
Sbjct: 185 VIQRMPKEINRIGLMSVQMFLGLLVVLPFYLGEVHSGALPNWNNHTLLALAYVGIVPSVL 244
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +++ G++R + VG+ + P+ ++ S+ +L + + + ++ + +++
Sbjct: 245 AYLLYTAGVERLGPAKVGLSIHLIPVFGVLLSIALLGESLHLYQISGMALIFLGILL 301
>gi|310828435|ref|YP_003960792.1| transporter [Eubacterium limosum KIST612]
gi|308740169|gb|ADO37829.1| transporter [Eubacterium limosum KIST612]
Length = 301
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 90/276 (32%), Gaps = 15/276 (5%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + ++ + + + V++ R +++ + IV+F + KDTLK
Sbjct: 15 LLVVAVVWGTGFVASKNAIAATTPMMVMAIR--FTVAFLIAFIVFFKHLRGISKDTLK-- 70
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
L + L Q +F V+ F+ K R +
Sbjct: 71 ----AGCIIGFFLFTAFAAQTIGLQFIQAGKQAFLTATNVVMVPFIFWAVKKHRPDRYNF 126
Query: 149 IAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
AA +++L + ++T G + A + + + +
Sbjct: 127 AAAFIMLLGITLLTTDFSTGFSFGAGDGLTLLCAFLFACHIVSVGVFSKDHDPIALTVIQ 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL +V+ FSG + + F + + K + I+
Sbjct: 187 LGFTALASLVYVIFSGELTTDISPAGWLNAVYLGLFSTFLAFLLQTVAQKYTSSTHAAIL 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + S+ +L + I ++ + ++
Sbjct: 247 MSLESVFGSIFSIILLGDHFTLMMAIGCVVIFLGVI 282
>gi|254459715|ref|ZP_05073131.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206676304|gb|EDZ40791.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 291
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 89/293 (30%), Gaps = 5/293 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G + ++ + + + +V+ ++ R + V GG
Sbjct: 2 SQNNAPLGISLMIATTFVFAMQDGISQHLAREYNVMMIVMVRYWFFAAFVITVASRSKGG 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L T + M +F +LA + + + + + P++ L
Sbjct: 62 LRKAVQTGQLK----MQIFRGVLLAAEICVAVQSFVYIGLIESHAVFACYPLVIAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E + + +A + + +LI+ A+ SA FA ++
Sbjct: 118 ILGETVGWRRWVAIGVGFIGMLIILQPGTGVFSPYALIPFVSALMFALYSMLTRYVAHKD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ G + + D ++ L + + + A+ S
Sbjct: 178 SAATSFFWTGVSGAALMTAVGFAFWERMSGVDWAWMGLLCLTGAAGHFLLIKTYEAAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
V Y + + + + + I ++V A + L+ + + +
Sbjct: 238 AVQPFAYLQLIWASSLGLLLFAEQLRLNVVIGASLIVAAGIFTLVRERMAARR 290
>gi|49478630|ref|YP_038474.1| DMT family permease [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49330186|gb|AAT60832.1| permease, drug/metabolite exporter family [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 309
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 89/297 (29%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S L
Sbjct: 8 YVIMLLVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTGL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGILGYNVFFFMGLTYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGISLILSLIGVIVVITSGSLNTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 244 LGASKASMYLNLTPIVATSISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 300
>gi|325297388|ref|YP_004257305.1| hypothetical protein Bacsa_0221 [Bacteroides salanitronis DSM
18170]
gi|324316941|gb|ADY34832.1| protein of unknown function DUF6 transmembrane [Bacteroides
salanitronis DSM 18170]
Length = 309
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 94/289 (32%), Gaps = 15/289 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T G + A +G+ PL+ + + + V+ +R + L + ++ +L
Sbjct: 5 TFKGFAYGAIAAASYGLNPLFALPLYADGMGADSVLFYRYAFGLVMLGVMMLVQKQSFAL 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + + + S FV PV+ L +VF K
Sbjct: 65 RRCEVLPLVIM------GLLFSFSSLTLFLSYNYMDAGIASTILFVYPVLVAILMAVFFK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGSS 193
E+++ + +I+ L + ++ G L ++T++ Y +
Sbjct: 119 EKVSPITMISIALAFTGISLLYQGEGGQTLSLTGVTLVFISSLTYALYIIGVNRSVLKDM 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ VL YV+ F + + + I
Sbjct: 179 PIAKLTFYVLLFGLSVYVIRLKFCTQLDVVSQPVLWINPVCLALFPTVISLVAMTKSIHY 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ I+ PL I V + + + + +++IA+ + +L
Sbjct: 239 IGSTPAAILGALEPLTAICCGVLVFGERLTPRIILGIVLILIAVTLIIL 287
>gi|325284722|ref|YP_004264185.1| hypothetical protein Deipr_2196 [Deinococcus proteolyticus MRP]
gi|324316211|gb|ADY27325.1| protein of unknown function DUF6 transmembrane [Deinococcus
proteolyticus MRP]
Length = 310
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 83/300 (27%), Gaps = 20/300 (6%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G + ++ + +S ++S R +F
Sbjct: 18 WVGVGLALFSASASATVGIWAKMGAAAGLSTSSMLSWRFGLLAALLFALGYAKV------ 71
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + L+ + + AL T+ + P + + LG +
Sbjct: 72 -----SREQLRPLLLMGLLHVGSTLAYFTALEHISASTTALLVYCAPAVVIVLGLLAHIR 126
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ Q+IA + +L L ++ G L +A F +
Sbjct: 127 -PSRWQVIALTVTLLGLTVVVGMPGPADASTVGLAMGGLAGLMYGGYFFASHRLNRGIKP 185
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V + A G G L + + + R
Sbjct: 186 LAVTAIVSLVTAAVAAGMGAMQGDLGVPHGWGQWLPVLGLALIPSLISMPTLYGAVARIG 245
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ ++ T PL I +V +L + + + + +++ + + + + K
Sbjct: 246 ATRTSMLTTTDPLWAIALAVLLLGEHLSAGQLLGGALILAGACLAQRESKPAKRRVRRGK 305
>gi|308184980|ref|YP_003929113.1| hypothetical protein HPSJM_06160 [Helicobacter pylori SJM180]
gi|308060900|gb|ADO02796.1| hypothetical protein HPSJM_06160 [Helicobacter pylori SJM180]
Length = 298
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 104/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + F +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLFIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S I + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISDPSVENVGPVEIIMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|296328000|ref|ZP_06870535.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154956|gb|EFG95738.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 303
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 97/279 (34%), Gaps = 13/279 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F A W + T+ L++V V + R ++ V F ++ + LKD
Sbjct: 27 CAFIAIFFWATAFVLTKVVLKEVDVTTLGVLRYFFASIIVIFILIKKKIPIPELKDIPA- 85
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + A + F A L S + P I+ + ER+ +
Sbjct: 86 -----FIFAGFSGYAGYIALFNIATLLSSPSTLSVINALAPAITAIVAYFIFNERIKLIG 140
Query: 148 IIAALLIILSLLIMTLHSG-----IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++ + +LI+TL G +L + + + F + M
Sbjct: 141 WLSMGISFCGILILTLWDGVLTVNKGILYMLAGCLLLSLYNISQRYLTKKYSSFDVSMYS 200
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST-VGI 261
+ I + V+++ S F + L + + + ++ + AK +T V
Sbjct: 201 MLIGGILLVIYSPSSITNMFSISFTSLILIVYMSIFPSIISYFFWTKAFELAKHTTEVTS 260
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P+L + + IL I ++++ M+++
Sbjct: 261 FMFVTPVLATLMGIIILGDIPKLSTLIGGVVIILGMILF 299
>gi|83594232|ref|YP_427984.1| hypothetical protein Rru_A2900 [Rhodospirillum rubrum ATCC 11170]
gi|83577146|gb|ABC23697.1| Protein of unknown function DUF6, transmembrane [Rhodospirillum
rubrum ATCC 11170]
Length = 308
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 86/308 (27%), Gaps = 18/308 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIV 72
S + + LW + + Q + + + R + + +
Sbjct: 3 SMPSLRDRVFSAYGLLILPQFLWATNAIVGKIAAQHAIPPVALAFWRWVLAFAFLLPFAW 62
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ +LV A + AL T + PV+
Sbjct: 63 SAL----VADRAKLRAHWPMVLVLGALSAGAYNALMYAALATSTAINVTLVASAMPVVMA 118
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSA 180
L V+L ERLN Q + ++ L ++++ G L+ LA+A
Sbjct: 119 LLARVWLGERLNGRQGLGIVISALGVVVVVARGDITVLLSLALNRGDLLMLLAMASWSVY 178
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
R+ + L + +GG L +
Sbjct: 179 SVLLRRHPLGLKPVSLLAGQIGAGVLVLVPIYAWERAGGAVLPLDLTTAWVLPYTAIFPA 238
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F F ++ G+ S G+ P+L + +V++L + +++ +
Sbjct: 239 IFAFYFWNRGVAAVGPSIAGVYTNLMPILTALLAVWLLGEEFAWYHMAGLALILGGIAFV 298
Query: 301 LLPTVINS 308
+
Sbjct: 299 TGLPRRRA 306
>gi|90421680|ref|YP_530050.1| hypothetical protein RPC_0156 [Rhodopseudomonas palustris BisB18]
gi|90103694|gb|ABD85731.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisB18]
Length = 307
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 93/300 (31%), Gaps = 10/300 (3%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVF 68
+++ S + G + A L+ + + S+ +++ R L +
Sbjct: 4 FARISSGAAPDNARLAGIGLMLAAMALFSFGDALGKLVVASYSIGQLLLLRACAGLIVLS 63
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
I + + + + I + F A Y +
Sbjct: 64 PLIW-------RQRAEFFRLQRPWLQLARTIIATLEVATFFLATAYLPLADVITFYLASS 116
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ ++FL+E+++ + IA ++ + +LI S + A+ ++ FA +
Sbjct: 117 LFVTVGSALFLREKVDAPRWIAIVVGFVGVLIALQPSAQTMTWPALIALCASVFFAALLL 176
Query: 189 PVGSSEGF--FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
S G + + L + + + D+ G +++
Sbjct: 177 ITRSLRGTPDMVLASQQFLGTLALGAVLIPAAPSGWITPGLFDSALFAIAGAVSALGLLC 236
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ A S V +YT + +V + I++ A LL +
Sbjct: 237 VNRSLRLAPASVVVPYQYTMIVWGVVFGYLVFGDWPSMATLSGAAIIIGAGFYILLRERL 296
>gi|290961608|ref|YP_003492790.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260651134|emb|CBG74255.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 323
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/308 (11%), Positives = 85/308 (27%), Gaps = 19/308 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAY----ILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVF 68
++ + PT L A +LW + + + S + R+L + +
Sbjct: 1 MANTSRPAPTRKVELLAAGAATVTVVLWASAFVSIRSAGEAYSPGALALGRLLAGVVALG 60
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
+ GL + V + + + + P
Sbjct: 61 AIWWWRGEGLPPRSAWRG------IAVSGVLWFGFYMVALNWGEQRVDAGTAALVVNIGP 114
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA-------Y 181
++ LG+ L + + + + + + L + + V
Sbjct: 115 ILIALLGARLLGDPMPPRLLAGMAVSFAGAVAVGLSMSGEGGASVLGVVLCLLAAVAYAA 174
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ +G++ + + A+ + + G E + +
Sbjct: 175 GVVAQKPALGAASPLQVTTFGCLVGAVVCLPFAGQLVREAATAPLPSTLNMVYLGVFPTA 234
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F I++Y + R S +G Y P L+++ S L + + + + + V
Sbjct: 235 LAFTIWAYALARTTASRMGATTYAVPALVVLMSWLALGEVPGPLTLAGGALCLAGVAV-S 293
Query: 302 LPTVINSG 309
Sbjct: 294 RSRARTRR 301
>gi|206967716|ref|ZP_03228672.1| transporter, EamA family [Bacillus cereus AH1134]
gi|206736636|gb|EDZ53783.1| transporter, EamA family [Bacillus cereus AH1134]
Length = 303
Score = 69.2 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 92/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R L ++ + + + K + ++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWLIAIVCLLPMVWF-----KEKKILPPRTAILPLIF 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKINTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQILGTVVVVTGCYLFS 285
Score = 37.2 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 37/101 (36%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + + + +++ + VG++
Sbjct: 40 WLIAIVCLLPMVWFKEKKILPPRTAILPLIFMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ I+T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKINTLQILSMILSFFGVILVLLKG 140
>gi|332702543|ref|ZP_08422631.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
gi|332552692|gb|EGJ49736.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
Length = 322
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 92/310 (29%), Gaps = 17/310 (5%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHR 59
M A +NA+ T++ L + A +LWG + + + + + V+ R
Sbjct: 10 MKTSADMIAAPGAAFTDNAARKTILPVLALLAAVLLWGASYPAMKVVVQALGPWAVMWAR 69
Query: 60 VLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFL 119
+ +L + L + +L + ++ +++ F AL
Sbjct: 70 MAIALAIIAPFA------PRLKPRAYRRGDWWLLLPMAISMPCLYFLFEANALRFTSAAQ 123
Query: 120 TSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP----------L 169
P++ +FL E L+ L I + +TL
Sbjct: 124 AGVISSSVPLLVAVGARIFLAEALSATTAAGLALAIGGVAWLTLAGSPSESASNPLLGNA 183
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
L L V +A K + S + L F E G
Sbjct: 184 LELCAMVCAAASMLLLKRLSERWSSWTLTAVQTLCGFLFFLPGAPLVLSVELLEQGWPVL 243
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ F ++++G+ S P+ + +L + ++ + +
Sbjct: 244 LTLAFLGSCVTLGAFGLYNWGMSHLPASQASAFINLVPVTAVFLGWLLLGETLNAYQLLA 303
Query: 290 FGIVVIAMVV 299
V+ + +
Sbjct: 304 SACVLAGVWL 313
>gi|308183339|ref|YP_003927466.1| membrane transport protein [Helicobacter pylori PeCan4]
gi|308065524|gb|ADO07416.1| membrane transport protein [Helicobacter pylori PeCan4]
Length = 298
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 104/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + A +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLAYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISDPSLENVGLVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|300777882|ref|ZP_07087740.1| integral membrane protein [Chryseobacterium gleum ATCC 35910]
gi|300503392|gb|EFK34532.1| integral membrane protein [Chryseobacterium gleum ATCC 35910]
Length = 292
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/263 (11%), Positives = 79/263 (30%), Gaps = 2/263 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + + +G+ P++ + S+ + +R +S V +VY +
Sbjct: 2 KLRGYALGILSAVSYGLIPIFILPVKQAHFSMDITLFYRFFFSALMVGGYLVYSKESFKI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K +G+ ++ F+ + + + +
Sbjct: 62 NKREALILAVLGVCYALSSEFLFLGYDFLTPGIASTVLFIYPVIVALLMFFFYKEKLAKL 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++ L A ++++ + L + ++ + A GF +
Sbjct: 122 SIVSLLLAFAGVIVLCLKGNGLEINFTGLGIVMLSSLFYALYMVIVNKSNIKVSGFKLTF 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ ++F++ + F I L Y IK + V
Sbjct: 182 YSMFFTSMFFMSKAAMAEASFVIPSAEIFINFFIFAFLTTVISSLCLVYAIKYIGSTPVA 241
Query: 261 IMEYTAPLLMIVSSVFILKQPID 283
I+ P++ ++ SV I +
Sbjct: 242 ILGALEPVVAVLISVLIFHEKFT 264
>gi|229005487|ref|ZP_04163200.1| Transporter, EamA [Bacillus mycoides Rock1-4]
gi|228755849|gb|EEM05181.1| Transporter, EamA [Bacillus mycoides Rock1-4]
Length = 309
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 94/300 (31%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + + L
Sbjct: 6 RMKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFFMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +LV ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LLVVGIVGTTLYQTLFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +LL ++ L + A +
Sbjct: 121 KQERFSMKIQIGSLLSFSGAALVLLTGHTNQSTYEYAWLGNLIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIF 247
+ + I + VV+ F+ + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLAWPTDTLSWGSLGYSILFATVFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+T++ + ++ I + V V
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGERINTMQLLGGLVIFIGLYVVKKGAVKK 300
>gi|126735678|ref|ZP_01751423.1| hypothetical protein RCCS2_17421 [Roseobacter sp. CCS2]
gi|126714865|gb|EBA11731.1| hypothetical protein RCCS2_17421 [Roseobacter sp. CCS2]
Length = 296
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/293 (8%), Positives = 70/293 (23%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G F+ A + + + L + +V+ L L
Sbjct: 1 MDNIRGAAFMVFAMFCFAVEDALIKQLAGTIPAGQVLGTICLGGFLAFLAWSAIKGQTLW 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + V I + + ++FL
Sbjct: 61 QPAYLNPKVVLRSLCEVIGSCFFVSALALIPLTTASAVIQATPL------VVAMGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + + +A ++ + +LI+ + + + A + + S
Sbjct: 115 GQGIGWRRWLAIIVGFVGVLIIIRPGMEGFVPATLLAVGGMFGLATRDLITRSLTVQVTG 174
Query: 200 M---CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
G+ F + +L + + +
Sbjct: 175 PQLGIHAFALVTPAAFALVLLQGQTFVAPSPTQWAWLGAGVAIGMLAYLAIITATRGGNA 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ Y+ + ++ + + D I I++ + + L
Sbjct: 235 GIISSFRYSRMVFALIIGYVVFTEIPDAPTLIGAAIIIASGIYTLWREARLRR 287
>gi|68248832|ref|YP_247944.1| hypothetical protein NTHI0327 [Haemophilus influenzae 86-028NP]
gi|68057031|gb|AAX87284.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 300
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 57/292 (19%), Positives = 118/292 (40%), Gaps = 5/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 10 QGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSLI 69
Query: 85 L----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + F++A L +G + YF+ P+I LG +LK
Sbjct: 70 TTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWLK 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ +Q IA LL + H+ ++ V + + I +
Sbjct: 130 ERLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKLMKIPALQGITL 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I ++ S L L G++++ ++ +S
Sbjct: 189 DIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIFA 248
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 249 VLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 300
>gi|229188676|ref|ZP_04315715.1| Transporter, EamA [Bacillus cereus ATCC 10876]
gi|228594865|gb|EEK52645.1| Transporter, EamA [Bacillus cereus ATCC 10876]
Length = 316
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 102/305 (33%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMVFGSIGLLCIGALQVGVMPFTFSLHVILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQKM 309
Query: 310 KNKTK 314
+ + +
Sbjct: 310 EQEKQ 314
>gi|158422611|ref|YP_001523903.1| drug/metabolite transporter (DMT) permease superfamily protein
[Azorhizobium caulinodans ORS 571]
gi|158329500|dbj|BAF86985.1| drug/metabolite transporter (DMT) permease superfamily protein
[Azorhizobium caulinodans ORS 571]
Length = 308
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 87/284 (30%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +LW I + +++ V + R L + + + L
Sbjct: 18 YLLLSFTALLWAINMVIGRYMVGAVPPITTACVRWLLATLILLPFAW----RQIVRDAPL 73
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ S+T +A + Y L Q ++P++ + ++ L+
Sbjct: 74 LRRHFWRLVLLSSTGIASYNAMSYYGLQYTQALNGLLLQSISPLLVAVWSLLLFRDGLSL 133
Query: 146 LQIIAALLIILSLLIMTLHSGIP-----------LLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + + + +LI+ I + + ++ Y + P
Sbjct: 134 GQTVGVFISLAGVLIIISGGSIDTLLHLTLNAGDIWIMVALAIYAFYTAILRVRPPLGPL 193
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F + + L V+ + G +F + + F+ G++
Sbjct: 194 SFLAAIMAIGGVLLLPVMAWELTHGAELHFNRFTLGVFAYVSTAPSLLAYLAFNRGVQLV 253
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + P+ ++ L + + +V+ ++
Sbjct: 254 GANRAAPFFHLMPVFGTALAILFLGETFAWFHAAGYALVLTGIL 297
>gi|153807052|ref|ZP_01959720.1| hypothetical protein BACCAC_01329 [Bacteroides caccae ATCC 43185]
gi|149130172|gb|EDM21382.1| hypothetical protein BACCAC_01329 [Bacteroides caccae ATCC 43185]
Length = 291
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 96/285 (33%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R L + G++
Sbjct: 10 LIAILTVAIWGLTFIATKVLINHGLTPQEIFFYRFLIAYIGIWAI-------SPKHLFAD 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q +F P+++ L + E+
Sbjct: 63 NLKDELWLVAGGVFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKAT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I +LL ++ + ++ + + L + + + R T +
Sbjct: 123 KGLIYGSLLALIGVGLVVFNGSVVLKLSPVGDLLTLLAALSWAFYSLVIKRMTGRYPTVF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + L + + L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFLLHPLQPDFDVLLQPLVLSNLLFLAVLASLICYILWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +V+SV IL + I + + +++ + +
Sbjct: 243 GTMRASNYIYLNPLVTMVASVLILHEQITWITLMGAACIILGVYL 287
>gi|121604267|ref|YP_981596.1| hypothetical protein Pnap_1360 [Polaromonas naphthalenivorans CJ2]
gi|120593236|gb|ABM36675.1| protein of unknown function DUF6, transmembrane [Polaromonas
naphthalenivorans CJ2]
Length = 296
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 73/272 (26%), Gaps = 1/272 (0%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + + L VL ++ R + + + A++ G + P
Sbjct: 24 AVVWGTSYGVAKGALAFYPVLGFLAVRFILTFVLLLPALLRAKGRQRMDAVRAGLPLGAL 83
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
ML F+ FV + + + + AAL
Sbjct: 84 MLGIFLCETFGVAHTQASNAAFLISLCVVFTPFVEWWLLGHRPARAMFVFAGISLLGAAL 143
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
L L G+ L + + + + +
Sbjct: 144 LSGGLAGQFGLGDGLMLTAAVLRAITVCQTSKLTRRSSAPALALTAVQAGVIGFGSLLLA 203
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
L + F F ++ ++R S V ++ + P +
Sbjct: 204 LLMPGELPPLPLDSAFWLTSAYLVLGCTVFAFFAQNWALQRTSPSRVALLTSSEPAFGAL 263
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+V L + + + G++V+A +
Sbjct: 264 FAVLWLGEGLSITGWLGGGLIVMAALWTTARR 295
>gi|289422483|ref|ZP_06424326.1| putative membrane protein [Peptostreptococcus anaerobius 653-L]
gi|289157055|gb|EFD05677.1| putative membrane protein [Peptostreptococcus anaerobius 653-L]
Length = 310
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/306 (11%), Positives = 86/306 (28%), Gaps = 18/306 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQV--SVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + + A +WG + +++L ++ + ++ R + + + +
Sbjct: 2 KNKHRQKGIIMMVIATFMWGFMGVSSRYLNEIQMNSYDISFVRSSFGFVLTAIFLYFTNK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + A+ + +A+ + + F P+ G
Sbjct: 62 SAYKVDM----KGLIFCAFYGILNFAIGISAYSFAVSRIPLSVATVLMFSNPIWVTIFGY 117
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG- 195
+F K++++ +II I + + +L +A
Sbjct: 118 IFFKDKISLKKIIVVSTCIFGCMCIIDIFSTSGANLDTLGILAAIFNGMTFAMQIVLPRF 177
Query: 196 -----------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ M F + S L+ L
Sbjct: 178 VEGKIQKDTILLYGFMSSSIFILFFTDIPRLVSSVTSSNNPMFYLLHILVIGILCTFVSN 237
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ S +M P + + FI + + ++ I IVV ++ L
Sbjct: 238 NLYVKSTHYIGTSLPSMMVALEPTFASILAFFIFGENMKIIQIIGALIVVGSVFAMELDL 297
Query: 305 VINSGK 310
I K
Sbjct: 298 RIVLAK 303
>gi|257460790|ref|ZP_05625891.1| integral membrane protein DUF6 [Campylobacter gracilis RM3268]
gi|257442121|gb|EEV17263.1| integral membrane protein DUF6 [Campylobacter gracilis RM3268]
Length = 297
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 20/286 (6%), Positives = 76/286 (26%), Gaps = 4/286 (1%)
Query: 30 VFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ I +G+ L +Q L + ++ R + ++ +
Sbjct: 13 MLFVAIAFGLGYLPTSQALASNNAFVLLFWRFFAASIIAGAIFFPKLKAITSREIKHGAV 72
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
++ + + ++ G + F+ + + +
Sbjct: 73 LSLFLFAGFTSQTFAFKFAQSSSVAFIIGLNVALVPFIAAAL---FRHKIYSYAYAGIAL 129
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L ++ + L G L + + + G +
Sbjct: 130 AVIGLYLIGDTQLGLGKGEALALVCACAYSFHIVLTNRFVQSCDVAGIAYVQILCLSVLC 189
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + + L F F + K + P+
Sbjct: 190 CFAAIFFERVSIVPVMDRSFFVAMAVICLLGTVFGFFAQALMQKYTTPVKTALFFTLEPV 249
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ VF+ + + ++ + +++ +++ + +++ ++++
Sbjct: 250 TAGIMGVFVGGERLSAMQILGAALILAGVLISEIGNYLSARRSRSA 295
>gi|228906216|ref|ZP_04070103.1| Transporter, EamA [Bacillus thuringiensis IBL 200]
gi|228853372|gb|EEM98142.1| Transporter, EamA [Bacillus thuringiensis IBL 200]
Length = 316
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 102/305 (33%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAILYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQKM 309
Query: 310 KNKTK 314
+ + +
Sbjct: 310 EQEKQ 314
>gi|6957732|gb|AAF32476.1| unknown protein [Arabidopsis thaliana]
Length = 432
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 90/298 (30%), Gaps = 27/298 (9%)
Query: 34 YILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ WG + + + + V + R++ + + VY L + +
Sbjct: 132 FFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFA 191
Query: 93 MLVFSATILAVHWGFFIYAL----------LTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
++ + + V + + L S P+ L S E
Sbjct: 192 LVDATCFQILVCMLVMLVRIMVQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGES 251
Query: 143 LNHLQIIAAL-------------LIILSLLIMTLHSGIPLL---SLAIAVTWSAYCFARK 186
+ ++ L + SG + + ++A+ + K
Sbjct: 252 IGIVRAGGLLLGVAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSK 311
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ G+ + + L + A+ + + G L L ++ + +
Sbjct: 312 YSDPIMATGWHMVIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGV 371
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ Y + L+ + + + P+ + L + +++ + + ++A+ + P
Sbjct: 372 YFYSATKGSLTKLSSLTFLTPMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNFPE 429
>gi|296126248|ref|YP_003633500.1| hypothetical protein Bmur_1207 [Brachyspira murdochii DSM 12563]
gi|296018064|gb|ADG71301.1| protein of unknown function DUF6 transmembrane [Brachyspira
murdochii DSM 12563]
Length = 283
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/290 (15%), Positives = 103/290 (35%), Gaps = 8/290 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L + + + + I + + + V+E + R +L F ++
Sbjct: 1 MKNDIKIGALLIIFSALSFSIMEIAVKISGSRIPVMEQVFARNFITLFISGFVMI----- 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + K + ++ + + + YA S +P S +
Sbjct: 56 -KNREKFFPDKKNIVSILCRSASGYLGIIAYFYAANNMILADASVLQKTSPFWSSLFAFI 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+KE++ +Q I ++ + + + + + A+ SA +GS +G
Sbjct: 115 LIKEKILKVQWIGLIIAAIGSIFVIKPTMNSNVFPALVALSSAMFAGISYAIIGSLKGKE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ +L + + F + NI + L L+ G+ F + K+A +S
Sbjct: 175 SNSLIIFYFSL-FSCLFSLFFIKSFVMPNIFELLMLLLIGIFAGFGQFFLTIAYKKAPVS 233
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V I YT + + SVF+ + D I I+++A +
Sbjct: 234 AVSIFNYTGVIFSYLFSVFLFNEIADIYSVIGMIIIILAAALVYYYKRKA 283
>gi|218663532|ref|ZP_03519462.1| putative transporter permease protein [Rhizobium etli IE4771]
Length = 298
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 84/285 (29%), Gaps = 1/285 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ AS + + G +P++ + L +V + RV +L +F +
Sbjct: 7 TLSEASPSNRLALAALVLGGAAIGGSPIFVR-LSEVGPMATAFWRVALALIPIFIVSLMK 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L D ML + A T L + V+
Sbjct: 66 KDAGPNLSDYGMLVLPGVMLALDLAAWHLSLTMTSVANATLLANLAPVFVTLIAVLVFRA 125
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ + L + +++ + + IA + A +
Sbjct: 126 RTSGVFLLGLLLALAGVVILKGGPAGLGNGDLSGDGAAMIAAFFYACYILAIGRLRSRFD 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I + A A+ F G+ ++ + ++ +Y +
Sbjct: 186 TIRIMLWSTASAAVCIFPIAFFFEGQMLPATLYGWSILFGLAFISHAGGQVAITYALAYL 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P++ + + +L + I T++ + +V+ ++V
Sbjct: 246 PPAFSSLTLLLQPVVAAILAWALLNEAIGTMQALGAAVVLAGIMV 290
>gi|157803263|ref|YP_001491812.1| S-adenosylmethionine transporter [Rickettsia canadensis str.
McKiel]
gi|157784526|gb|ABV73027.1| S-adenosylmethionine transporter [Rickettsia canadensis str.
McKiel]
Length = 294
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 89/297 (29%), Gaps = 8/297 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + + +++L + EV R +S + + Y+
Sbjct: 1 MNDALKTYLTGIGWFLLSLVSSSANDVMSKYLGTRLDSFEVAFFRFFFSSIVLLPFVAYY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + +L + Y L + F P+ ++ L
Sbjct: 61 GKN-------TLKTSSPFVHILRGLLLFFGMTAWTYGLTIAPVTTATVISFSIPLFTLIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E + + + ++ + L+I + +A FA I
Sbjct: 114 AVFFLNENIIWQRWVVTIVGFIGLVITLKPHAEDFNPEILYFVLAAISFAMLDIINKKFV 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ + + +++ + + + L G S +
Sbjct: 174 IKESMISMLFYSAIVTAIVSLPVASQYWLTPSSFELVLLFVLGSSGSIILFFLLKAFSMV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y ++ +++ I + D I++ A + + +
Sbjct: 234 DATATAPYRYLELVISAIAAYLIFNEFPDKSTLYGAVIIIPATLFIIYSEKKAMSRK 290
>gi|91225735|ref|ZP_01260764.1| putative permease [Vibrio alginolyticus 12G01]
gi|91189624|gb|EAS75899.1| putative permease [Vibrio alginolyticus 12G01]
Length = 292
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/297 (8%), Positives = 88/297 (29%), Gaps = 12/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ + ++ + ++++ ++ + I R + +
Sbjct: 3 NSERKATVILVATTMIAALGWIFSKETIQGLPPFGFIGARFTIASLCLLPLCY------- 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + ++ +F ++ + + V
Sbjct: 56 RPLLKANLKDVLSAGGVGLLLGSAVMTWIYAISISDTLGEGAFIMSLSMLFVPIVAWVMF 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++R + ++ + +L L ++L G L A A F +
Sbjct: 116 RQRPQRIFWLSLPIAVLGLACLSLVGGWKQSASQLWFLGAALVLALHFNVNSKYSQKLPV 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + F + + F + L S + + + G K +
Sbjct: 176 LLLTCVQLFSAGCLGLLVSFFMESFPAEVDSSIWWWFALSTLLATSLRYVMQTMGQKFVQ 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ P+ ++ SV + + + + +++ ++++Y K
Sbjct: 236 AGNAALIMILEPVWTVILSVLWYGEVLTANKLVGCVLILFSLIIYRTGGRFRFPTRK 292
>gi|83952133|ref|ZP_00960865.1| membrane protein, putative [Roseovarius nubinhibens ISM]
gi|83837139|gb|EAP76436.1| membrane protein, putative [Roseovarius nubinhibens ISM]
Length = 302
Score = 69.2 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 9/298 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY 73
+ A T+ ++ A + + + + + ++ E++ +R L V
Sbjct: 10 AATPAGNDTLRAAAWMVGAILSFSAMAVAGRAVSFELDTFEIMMYRSLIGFALVLLFASA 69
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + F+ L + +A+ F P+ ++F
Sbjct: 70 LGRLPEIRTRRFGLHVIRNICHFTGQNL------WFFAITVIPLAQVFALEFTAPLWALF 123
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L + L ERL +++AA + +LI+T S L +A +A FA +
Sbjct: 124 LAPLVLGERLTLQRVLAAFIGFAGILIVTRPSPDTLSWGLVAAAIAAVGFAGTAVTTRRL 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEH--FFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
C+L +++ G L + P +L+ GL + +
Sbjct: 184 TRNDSLTCILFWLTGLQLIFGLLCAGHDLDIALPSGPSLPWLLIIGLGGLVAHFCLTTAL 243
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K A + V +++T L+ V + + + +D I ++ A +
Sbjct: 244 KLAPATVVMPVDFTRLPLIAVIGMVLYGEALDIYVFIGAAVIFAANYTNIWLESRARR 301
>gi|254420073|ref|ZP_05033797.1| RarD protein [Brevundimonas sp. BAL3]
gi|196186250|gb|EDX81226.1| RarD protein [Brevundimonas sp. BAL3]
Length = 307
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 6/287 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
A+ Y LWG+ PL L E+++HR +WS V + +G
Sbjct: 5 ATPNDPRAVATAVACYSLWGLLPLLFMALAAHGFGAPEILAHRAVWS-VFVAGLFLLLAG 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K L P+ + L SA ++A +W +++A S Y++ P++++ G+
Sbjct: 64 QWGEAKQVLATPRTLAWLALSAAMIATNWSLYVFATTHHATLEASLGYYINPLLNMAAGA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V +ER++ +A L + ++I T+ G P++ L +AVT+ AY RK +P + G
Sbjct: 124 VLFRERIDRWSGLAIGLAAVGVVIQTIALGHVPIIGLTLAVTFCAYAVIRKRVPASAQTG 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F+E VL ++ W G F L+ +F++ +R
Sbjct: 184 LFVECLVLLPIGALFLAWLATHGQATGFASPAGLAWALVNG-PATVIPLVLFAWSARRLP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
LST+G +++ AP L V+ + + +R + FG + V+ +
Sbjct: 243 LSTLGFIQFLAPTLQFACGVWA-GEALTPLRIVSFGFIWAGAGVFAI 288
>gi|168491346|ref|ZP_02715489.1| membrane protein [Streptococcus pneumoniae CDC0288-04]
gi|183574508|gb|EDT95036.1| membrane protein [Streptococcus pneumoniae CDC0288-04]
Length = 298
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 100/298 (33%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++ GTL A I WG++ Q+L +S L + + R+L + + +
Sbjct: 2 SNSLKGTLLTVVAGIAWGLSGTSGQYLMAHGISALVLTNLRLLIAGGTLMLLAYATAKDK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + +L+F+ L ++ ++ A+ + +V PV + +
Sbjct: 62 ILVFLKDR-KSLLSLLIFALIGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILIYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-------FARKTIPVG 191
+ +I++ + I ++ H + LS+ A + + I +
Sbjct: 121 DRVAPTLGEIVSIIFAIGGTFLIATHGQLDQLSMTPAGLFWGLFSALTYALYIILPIALI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + V + A + F + F + F G
Sbjct: 181 KKWGSSLIIGVGMVIAGLVALPFTGVLQADIPTSLDFLLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ P+ + + I+ + T+ + +++ A+ + L +
Sbjct: 241 SLIGPVKSSLLASIEPISAVFFAFLIMNEQFYTIDFLGMAMILFAVTLISLKDLFLEK 298
>gi|163760631|ref|ZP_02167712.1| hypothetical protein HPDFL43_12071 [Hoeflea phototrophica DFL-43]
gi|162282246|gb|EDQ32536.1| hypothetical protein HPDFL43_12071 [Hoeflea phototrophica DFL-43]
Length = 309
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 88/292 (30%), Gaps = 10/292 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L + A + + ++L + V++V+ R L +
Sbjct: 14 GVLTMLFAVVFFTCIDTSAKWLVLAGLPVIQVVFVRYFGHFVYAMIF------YLPKERA 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +A + L YAL + LT+ F P++ L L E++
Sbjct: 68 EVFVSRAPFKQFLRSLFLFGSTICNFYALQSLPITLTTTIMFAGPIVVTLLAIPILGEKV 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-FIEMCV 202
+I A + + +L++ G + + I G
Sbjct: 128 GIRRIAAVCVGFIGVLVVIQPWGAEFDPAMFFSLAALLIASLYFIMTRMLAGVETNATQQ 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + F+ + N L + G + + + A S + M
Sbjct: 188 VWSSGFASIALAPFALSAWIWPENGLQWLIMCLIGGFGMMGHSLATLAHRWADASILAPM 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y+ L ++ +F+ I++ + +Y+ G +T+
Sbjct: 248 VYSQIFLAALAGIFVFSTTPTIWTLAGGLIIITS-GLYIWRRERQRGHKQTR 298
>gi|330718037|ref|ZP_08312637.1| DMT family permease [Leuconostoc fallax KCTC 3537]
Length = 307
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 105/300 (35%), Gaps = 11/300 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+F + IL+GI+ + L Q + ++ R+ WS + ++ G S+
Sbjct: 9 IIFGGLSAILFGISGILASVLFQRINMVPEWLVGMRMFWSGL-LLILVLACKFGGSIFSI 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ A+ +++F + + F ++ + + + P I + L S+F ++
Sbjct: 68 WYRKADAILIILFGVIGVLLAQSSFFLSVYFGNAAMATILQSLGPTIIIILLSIFYRKLP 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ ++ ++ ++ + ++ + I L + + A ++
Sbjct: 128 VRMDTVSIIIALIGVFLLVTNGDIGHLKVTTQALFWGIISAFGVAAYTLIPRPLLQQHHA 187
Query: 204 AIPALFYV-------VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + L I ++ + ++ +
Sbjct: 188 LLVVAWGLLIGGIAENLIQPLWHIPNNLQVIDWSMIGFIIIGGTLVPYALYVLSLCHLAP 247
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+T ++ PL + SV +L + V+ I +++ +++ LP K +++
Sbjct: 248 TTASLLGIIEPLTATLISVTLLGVQLLPVQMIGVCLILSTIILISLPVERIVEKFLKRRA 307
>gi|302561838|ref|ZP_07314180.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302479456|gb|EFL42549.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length = 317
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 74/279 (26%), Gaps = 6/279 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + + +V R+ + + A+ GL T + G
Sbjct: 37 SLIWGFSFLLIKVGTQGYAPFQVTLGRLAFGTAVLAVAMAVRREGLPRGARTWGHLAVAG 96
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ + + + + + V L + L
Sbjct: 97 FLLNALPFSLFAFAELTIPSTLAGICNATSPLWGMALSMVALSEDRPTRVRVAGLGVGFL 156
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L G+ A+A+ S + G + L +
Sbjct: 157 GVLTVLGAWQGFQGLDARGTALALLASLSYPVGWIYVRRTLAGSSHSNLSLTGGQLLLAT 216
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ V P L + + +T ++ Y P
Sbjct: 217 IQLAVVTPLFTTMPTGFAVGPLLAIAALGTLGTGLAVLVQYGIVAEVGPTTGQMVTYFVP 276
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ + V +L + + + IV+ + +
Sbjct: 277 VIAAAAGVVLLGETLTWSTPVGAVIVLAGAALTQVRPKR 315
>gi|229115890|ref|ZP_04245287.1| Transporter, Drug/metabolite exporter [Bacillus cereus Rock1-3]
gi|228667552|gb|EEL22997.1| Transporter, Drug/metabolite exporter [Bacillus cereus Rock1-3]
Length = 295
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 91/291 (31%), Gaps = 10/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F + ++ + L + +R+L++ + +++ + LK K
Sbjct: 8 YFILFFGVFALSTSAIFVK-LADAPAAIIAFYRLLFATVILLPLLLFNKRNRNELKTLSK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G S LA H+ + +L ++ + P+ S+ G KER
Sbjct: 67 K--QWGFGFLSGLFLATHYVLWFESLRYTSVASSTVIVTLQPLFSMVGGYFLFKERFTKG 124
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+I + I +++ + +A F
Sbjct: 125 AVIGCFIAISGSIVIGWQDFQISGDALYGDILAFMAAGIITAYFFISQHIRKDLSLIPYS 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A F ++ F+ + IF++ +K + +
Sbjct: 185 VISYGSSACFLGIFAYMQQQSFIHYATQTWLSFIGLAFIATILGQTIFNWLLKWMSATVI 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + V + FIL + I + + I+ I + ++LL + + K
Sbjct: 245 SMSILGETIGTCVLAYFILSETITLQQALGISIIFIGLTLFLLQPKLANRK 295
>gi|195444612|ref|XP_002069947.1| GK11296 [Drosophila willistoni]
gi|194166032|gb|EDW80933.1| GK11296 [Drosophila willistoni]
Length = 350
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 90/297 (30%), Gaps = 18/297 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + + L V+ +E+ S R + L ++Y + +
Sbjct: 36 LGIILATLSSLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPTIPILIYTKQ--PVFPEG 93
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + ++ + F L + S FV VFL +
Sbjct: 94 KRVILLLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARVFLKEPCTLFNVV 153
Query: 145 HLQIIAALLIILSLLIMTLHSGIP----------------LLSLAIAVTWSAYCFARKTI 188
+ + +++++ + S P +A + +
Sbjct: 154 TINMTLLGVVLITRPPLIFGSATPTLDSESEKYSDKTYDIWGPVAAISSTLFGANVYILL 213
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ F + M AL Y + G + D ++ G+ + + +
Sbjct: 214 RALKNLHFSVIMTNFGAIALVYTFIVCVAIGAVCWPSCGRDRWLVVILGIFSFLGQILLT 273
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ + V I + + + + +VV ++++ L
Sbjct: 274 LSLQVEQAGPVAIARCADIVFAFIWQMMFFGETPTGYSLFGALMVVSSVILTALKKW 330
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 30/72 (41%)
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ + + Y + L+ ++ ++ P+ + + + LK+P + + +
Sbjct: 100 LRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARVFLKEPCTLFNVVTINMTL 159
Query: 295 IAMVVYLLPTVI 306
+ +V+ P +I
Sbjct: 160 LGVVLITRPPLI 171
>gi|184156890|ref|YP_001845229.1| DMT family permease [Acinetobacter baumannii ACICU]
gi|260556085|ref|ZP_05828304.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
gi|332874033|ref|ZP_08441968.1| putative membrane protein [Acinetobacter baumannii 6014059]
gi|183208484|gb|ACC55882.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Acinetobacter baumannii ACICU]
gi|260410140|gb|EEX03439.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
gi|322506786|gb|ADX02240.1| DMT family permease [Acinetobacter baumannii 1656-2]
gi|323516655|gb|ADX91036.1| DMT family permease [Acinetobacter baumannii TCDC-AB0715]
gi|332737774|gb|EGJ68666.1| putative membrane protein [Acinetobacter baumannii 6014059]
Length = 308
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 89/300 (29%), Gaps = 22/300 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLE----VISHRVLWSLPGVFFAIVYFSGGLSL 80
+G+ F C+ L+ ++ + +S L +++ R+L +LP +
Sbjct: 10 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDGTVLMALRMLSALPFFLLICWFNRHH--- 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+K + ++ L+ L F+ P ++V S+ K
Sbjct: 67 -NQGIKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIASSLLYK 125
Query: 141 ERLNHLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARK 186
++L+ + A L ++ L + S +
Sbjct: 126 QKLDVKSLFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSFVFASAVAFAGYLLLTPPLI 185
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ Y + L + + L+ +
Sbjct: 186 KKFGSWNFTGLALTVACIGTLTHYTLSTPHPFQLLLQLPSSVIWYGIGLGFLVTVLPTVM 245
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + + + ++ +++ L
Sbjct: 246 LMQSIERLGASQSAMIASIGPVLTILLAVAFLNEHLNIWQWVGCFLNIVGVMMITLRKKR 305
>gi|154489824|ref|ZP_02030085.1| hypothetical protein PARMER_00052 [Parabacteroides merdae ATCC
43184]
gi|154089266|gb|EDN88310.1| hypothetical protein PARMER_00052 [Parabacteroides merdae ATCC
43184]
Length = 317
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 91/302 (30%), Gaps = 25/302 (8%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + A ++WG+ ++ + ++ L + R+ ++ + +
Sbjct: 5 WKGHASMLGANVMWGLMSPVSKVILVGGAITPLVITDLRIGGAMILFWITSFFQK----- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + V + S + + G FI+ + S P+ ++ L + LK
Sbjct: 60 -PEHVNHKDLVSLFFASLLAIVFNQGCFIFGVSLTSPGDASIITTSMPLWAMILAAFILK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------------IAVTWSAYCFARK 186
E + +++ L L++ L SG + + A A
Sbjct: 119 EPITGKKVLGITLGAGGALLLILGSGQNIQITSTNKDTAIWGDLLVLFAQLSYALYIVLY 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNG--FSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
V I + + + ++ + L +
Sbjct: 179 KDFVNKYSLTTIMKWMFTYSFICMLPFSAKDLADVHWGNLQMTEIVGLAFIVIGATFISY 238
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G K+ + + G+ Y P++ + +V + + + ++ + +
Sbjct: 239 MLVVVGQKKLRPTVAGMYNYIQPIVACIVAVCWNIDSFNFTKIVAVFLIFGGVYLVTSSR 298
Query: 305 VI 306
Sbjct: 299 SR 300
>gi|154501106|ref|ZP_02039144.1| hypothetical protein BACCAP_04795 [Bacteroides capillosus ATCC
29799]
gi|150269934|gb|EDM97462.1| hypothetical protein BACCAP_04795 [Bacteroides capillosus ATCC
29799]
Length = 295
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 87/299 (29%), Gaps = 25/299 (8%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+S++N+S G L CA +WG + Q LE +S ++ R+ ++
Sbjct: 1 MSRQNSS-----GHLAALCAITIWGGAFVAAQIALEAMSPTVLMFLRITIAVIATTII-- 53
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L ++ + ++ AL S + P+++
Sbjct: 54 -----HPRPLGWLGWKTEGYYVLGGLLGIFFYYYLQNAALTYTSASNVSVLCALAPIVTA 108
Query: 133 FLGSVF-LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSA 180
+ R + L LL + + L + ++
Sbjct: 109 LAAPLLLRTPRPHGLFYFGCLLAAAGSALTVYNGSAVLQLNPRGDVLALLNAVVWGLYAI 168
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + ++ +++ G + L +
Sbjct: 169 VSKKISSFGHPLIPSVRKMFVYALLFSVVLLLFQGVQVQPEQLVRWDVLGSVAYLGLLGS 228
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + +++Y I R Y PL+ + + +L I + + +++ + +
Sbjct: 229 TVSYLLWNYAIHRLGSVRATTYIYLEPLVTMAVAAAMLGDSITWIALLGAVLIIGGLFL 287
>gi|332560921|ref|ZP_08415239.1| hypothetical protein RSWS8N_17784 [Rhodobacter sphaeroides WS8N]
gi|332274719|gb|EGJ20035.1| hypothetical protein RSWS8N_17784 [Rhodobacter sphaeroides WS8N]
Length = 307
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/278 (13%), Positives = 78/278 (28%), Gaps = 2/278 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L V A +LWG L + L V + R+ + + +
Sbjct: 8 LLCVILAAVLWGTAGTVQSLLPSEREPLVVAAIRLAVGATILTLMALRLPENRRSFRRLP 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQG-FLTSFSYFVTPVISVFLGSVFLKERLN 144
P V L L + + S +VT + L + R
Sbjct: 68 WRPVLVAGLAIGLYNLLFFVAVTQAGVGVGTAIAIGSAPVWVTLYEAAVLRRLPTGVRAA 127
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +L + + +LA A + ++ T VG+
Sbjct: 128 GQVLSVLGAALLVAGAGAGSASLTGAALAAAAGAAYATYSVATSRVGAQVPSDTLAAATF 187
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ F + L + + +F+ G+ ST +
Sbjct: 188 GVAMLLAAPALFLLPVSWVADLRAWPALLFLGAVTTGVAYALFTRGLAGLTTSTAVTLSL 247
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
PL + ++ +L + + R + ++ + + L
Sbjct: 248 VEPLTAWILAIVVLGEAVTAQRLLGAALLFAGLAIVTL 285
>gi|302386257|ref|YP_003822079.1| protein of unknown function DUF6 transmembrane [Clostridium
saccharolyticum WM1]
gi|302196885|gb|ADL04456.1| protein of unknown function DUF6 transmembrane [Clostridium
saccharolyticum WM1]
Length = 296
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 92/293 (31%), Gaps = 15/293 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
++K+ + + + I+WG + + +E ++ +++ R + +
Sbjct: 1 MNKQAGKGIKALSAVGLVITTIIWGSAFVVMKNSVEVITPAYLLALRFTIASAALVAVFW 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ V L V + F Y L +F + ++
Sbjct: 61 --------KRVRKICKTDVMCGGLLGVFLFVSYFFQTYGLQYTTASKNAFITTLYVILVP 112
Query: 133 FLGSVFLKERLNHLQIIAALLI------ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK 186
FL + K+R + + AA++ + ++++ G + + F +
Sbjct: 113 FLHWFYNKKRPSGNNVAAAVIAVLGLGLLSLEGNLSVNIGDVMTLICGFFFAFHIVFIDR 172
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ V+A + + + +G+ L F +
Sbjct: 173 YTEDHDPIALTVIQMVVAAMLSWAMAPLLEGFFDFRVIGSSMMISLLYLGIFSTMLCFLL 232
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G K +T I+ + +V SV L + + ++ ++++
Sbjct: 233 QNVGQKHLSPNTSSIILSFESVFGLVFSVIFLGESVTLKLAAGCTLMFASVIL 285
>gi|254455503|ref|ZP_05068932.1| integral membrane protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207082505|gb|EDZ59931.1| integral membrane protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 292
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 96/290 (33%), Gaps = 5/290 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G +F L + E ++ +++ R L+ V ++
Sbjct: 5 SKLPGPFLIFLGAFSLSFGGLIVKSFEGATLWQILFWRSLFFSLTVLTFLLISYK----K 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + F IL+ + +++A+ T+F + + G FLKE
Sbjct: 61 KTFKAFKDSGFPGFFGGIILSFGFCGYVFAMYNTTVANTNFIISLQILFLAIFGYFFLKE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++ + + +L + +L+M +S P ++ I + +
Sbjct: 121 KISAITFTSIILAMTGVLLMVGNSLTPGELSGNLAAFTMPITFAVLIMIVRKFPTVDMVP 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + G+ + L + F + G + + VGI
Sbjct: 181 AQFVAGIC-SCLIGYLLSSKIMISPHDIFLGFLAGCFQVGLGFIFITTGARTTPSAMVGI 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + +L + + + + I I++ A+++ ++ S K+
Sbjct: 240 IMLSESVLGPLWAFLFVSERPSLFGLIGGAIILFAVLIQFYSLLVKSKKS 289
>gi|15890333|ref|NP_356005.1| hypothetical protein Atu4657 [Agrobacterium tumefaciens str. C58]
gi|15158541|gb|AAK88790.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 303
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 94/289 (32%), Gaps = 8/289 (2%)
Query: 9 EYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVF 68
+ K + +G L + + G+T L +++ R + L +
Sbjct: 6 QSEKQENPRETDTRAGVGWLLLDMTLVSGGMTALVKAQGVTYPAFQLVFIRAMVGLIFIL 65
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
I G + +K +N + A+ A+ + F P
Sbjct: 66 PLIWRHRGEMVRVKYPWRNLFRIC-------CNAIALTSNFIAITLLPLATVNAVGFSRP 118
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
++++ + FL E ++ + + A L + +L++ G + V S A I
Sbjct: 119 LVTMAMAVAFLGETVSRFRWVGASLAFVGVLVVIGPDGAEFGVGVLVVLVSVVFGALAVI 178
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ ++ + V + D + L+G GLL F
Sbjct: 179 QTRALRQ-ENTTVMMVFYTVGLAVITAIPAIWTWKPVASFDWVALLGIGLLAQMGQYCFL 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ A S + + Y + L + F+ + + + I+++++
Sbjct: 238 RAYRIADASVLAPVGYLSILFVTAVGYFLFDEVPENRVVLGIAIILVSL 286
>gi|15894816|ref|NP_348165.1| permease [Clostridium acetobutylicum ATCC 824]
gi|15024488|gb|AAK79505.1|AE007664_2 Predicted permease, YCXC B.subtilis ortholog [Clostridium
acetobutylicum ATCC 824]
gi|325508954|gb|ADZ20590.1| permease [Clostridium acetobutylicum EA 2018]
Length = 299
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 105/294 (35%), Gaps = 22/294 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ + + ++G++ L+++ L+ L +++ R L + + +++
Sbjct: 4 KQKILPYIAATVSSTIFGLSFLFSKMALKVAGPLSLVALRFLLAFIIMTILVLF-----R 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++K +N +++ +++ F Y + + + P++ +GS FL
Sbjct: 59 VIKVDYRNKPIGQLVLLGLAEPVIYFIFETYGVKNISSSMAGLMLALIPIVVTIMGSYFL 118
Query: 140 KERLNHLQIIAALLIILSLLIM----------------TLHSGIPLLSLAIAVTWSAYCF 183
KE + + +L + + ++ G + A ++
Sbjct: 119 KEVPSLKRTSFIVLSVSGVALIGVMGSSGGSGNSPIGILFLLGAVTCAGAYSIISRKTSV 178
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
K + + FF C + A+ + + + L L +
Sbjct: 179 HFKPVEITYFMMFFAAFCFNIMAAIQLLAEGKINEYFSPLKSSTFVISILYLGILSSIVA 238
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + ++ + + + S + + ++ I++ V ILK+ + +++ +
Sbjct: 239 YFLTNFTLSKIQASRSSVFSNLSTIVSIIAGVIILKESFHLYHLVGSVLILTGV 292
>gi|86137153|ref|ZP_01055731.1| membrane protein, putative [Roseobacter sp. MED193]
gi|85826477|gb|EAQ46674.1| membrane protein, putative [Roseobacter sp. MED193]
Length = 284
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 90/289 (31%), Gaps = 9/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ G+L + A + + ++ + + ++ V +++ L + L
Sbjct: 1 METLRGSLLMVLAMAAFSLEDMFIKQVARELPVGQILILFGLGGMVIFSVGARAQGQALW 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + A+ S TP++ VF
Sbjct: 61 HPGFCTRPLVLRSLAEVTGRLCFT------LAIALTPLSSASAILQATPLVVAGGAVVFF 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
E + + +A + +L++ G SL + +
Sbjct: 115 GETVGWRRWLAISFGFVGVLMILRPGASGFEFYSLFAVIGTLGFAGRDLATRAAPKSMTN 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ + L + + L+L ++ + + +++ ++S
Sbjct: 175 MQLGLFGFAMLVIAGAIALAWTGGASWPSGQAWLYLALTTVIGVLAYNALTGAMRQGEIS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
V YT + + + + + D+ + ++V + + L+ +
Sbjct: 235 VVAPFRYTRLVFAMALGILVFGERPDSWTLLGSAVIVTSGLFTLIRSAR 283
>gi|93005188|ref|YP_579625.1| rarD protein [Psychrobacter cryohalolentis K5]
gi|92392866|gb|ABE74141.1| rarD protein [Psychrobacter cryohalolentis K5]
Length = 336
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 118/295 (40%), Gaps = 4/295 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVL--WSLPGVFFAIVYFSG 76
MMG + +L+G+ Y+ FL +S +V R+L W+ + I G
Sbjct: 29 QQRTLMMGVALAVLSNVLFGVLYAYSSFLAPLSGTQVFIWRMLAMWAALVGYLLISGRLG 88
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + K L+ I + F++A + QG T+ YF+ P++ V G
Sbjct: 89 FHIDKLKALGSVKQWAWLLLPTPIFLSQFWLFMWAPVNGQGVQTAMGYFLFPLMMVVFGC 148
Query: 137 VFLKERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V E+L+ LQ +A + + + + +L + T+ Y R+ +G+ G
Sbjct: 149 VLFGEKLSRLQWLAVAFAAVGVGSEIVRTQSVSWATLWVCGTYPVYYILRRLQGIGAVTG 208
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
I++ + A AL Y+ + S + + +++ +
Sbjct: 209 LLIDLTIFAPFALAYLFFIAPSSLSLVSGSGFFIAMLVGLG-VMSVLAMKTNVDASQMLP 267
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ G+M Y P L+ + ++ +L P ++ +G++ + + ++ V +
Sbjct: 268 MNVYGMMSYLEPALLFILAITVLGNPFESAMIYSYGLIWVGIACLIVHGVRQLRR 322
>gi|255068429|ref|ZP_05320284.1| integral membrane protein [Neisseria sicca ATCC 29256]
gi|255047315|gb|EET42779.1| integral membrane protein [Neisseria sicca ATCC 29256]
Length = 287
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 88/290 (30%), Gaps = 17/290 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
++ + ++WG + + ++ ++ ++ R+L + V + G +
Sbjct: 1 MIYQILSLLIWGSSFIAAKYTYEMLDAALMVEARLLIAALMVLPSCYRHFGKIP------ 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L + V L + P++ VF+G ++
Sbjct: 55 -RREWKPLLCIAFINYVVVLLLQFIGLKYTSAASAITMVGLEPLLVVFVGHFVFNDKAKI 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + +M L ++ ++ + +
Sbjct: 114 YHWICGAAAFAGIGMMVLGGAEEGGAVDWFGCLLILLAGFGFAGVIRPSQQMIARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + A L + L + + +++ G+ +
Sbjct: 174 FTSASMAAAAVLCLPFSLVLAQSYEVHWSWGGVLSVLYLGVGCSWLAYLLWNKGMNKVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ G++ P++ ++ +V+IL + + V + IV+ A V +
Sbjct: 234 NVSGLLISLEPVVGVIMAVWILGEHLSAVSALGVFIVIAATFVAGWLSNR 283
>gi|228906678|ref|ZP_04070552.1| hypothetical protein bthur0013_8550 [Bacillus thuringiensis IBL
200]
gi|228852990|gb|EEM97770.1| hypothetical protein bthur0013_8550 [Bacillus thuringiensis IBL
200]
Length = 338
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 87/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + + + ++++ + T+K
Sbjct: 52 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFKTVK 109
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 110 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 167
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 168 IILTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVIQLGFV 227
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 228 GLFSLIFSFIIETPKLPSTIDSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 287
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ L
Sbjct: 288 PVFSAGFAFVFTGETLTGKGYLGATLILLSVLIAELD 324
>gi|229128377|ref|ZP_04257358.1| Transporter, EamA [Bacillus cereus BDRD-Cer4]
gi|228655236|gb|EEL11093.1| Transporter, EamA [Bacillus cereus BDRD-Cer4]
Length = 312
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 89/293 (30%), Gaps = 17/293 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 69 RIDRKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 124 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGTTYEYAWLGNIIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + VV+ F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V
Sbjct: 244 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVV 296
>gi|228477282|ref|ZP_04061920.1| permease of the drug/metabolite transporter [Streptococcus
salivarius SK126]
gi|228251301|gb|EEK10472.1| permease of the drug/metabolite transporter [Streptococcus
salivarius SK126]
Length = 296
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 101/297 (34%), Gaps = 21/297 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G L IL+G++ ++T+ + QVS L +IS R + + + ++
Sbjct: 1 MKNKIILGCLAAATCEILFGLSFIFTKSITAQVSDLALISWRFVTAFLFINLYFLFSRRR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + + +++ + + PV+++ + S+
Sbjct: 61 LKI-----NGRNLKPLTRIAILNPIIYFICETIGIRMTTASESGAFLACIPVVALIMSSL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVG 191
LKE + Q++ + ++ ++I +G + S +
Sbjct: 116 ILKEWPSRWQVVGVITTLIGIIIAVFAAGGSTHFSLVGYLILGLAVVSYALYCVDVERAS 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGE---------HFFLGNIPDTLFLIGYGLLNSF 242
I +LA L + ++ G L +
Sbjct: 176 QFSSLEITYFMLASGCLTFGLFALSQGFLAGDLKELLLLPVTNPKFTITILYQGLGCSVL 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ I ++ + ++ I+++V +L +P ++ +VV+ + V
Sbjct: 236 GYLLSNFAIANIGVNRTASFIGISTIISILAAVVVLGEPFSYLQIFAGILVVLGVYV 292
Score = 39.5 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 31/103 (30%)
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A ++ + L F + GI+ S G
Sbjct: 41 WRFVTAFLFINLYFLFSRRRLKINGRNLKPLTRIAILNPIIYFICETIGIRMTTASESGA 100
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P++ ++ S ILK+ + + +I +++ +
Sbjct: 101 FLACIPVVALIMSSLILKEWPSRWQVVGVITTLIGIIIAVFAA 143
>gi|227536951|ref|ZP_03967000.1| possible permease [Sphingobacterium spiritivorum ATCC 33300]
gi|227243147|gb|EEI93162.1| possible permease [Sphingobacterium spiritivorum ATCC 33300]
Length = 289
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 106/291 (36%), Gaps = 16/291 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A IL G T ++ + + V+ ++ +RVL+S ++ + F +
Sbjct: 5 YLVLHIAVILAGFTGIFGKLIT-VNEGLLVWYRVLFSAIILWIILKLFHVSRHITTKEKF 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +HW FF ++ + Y +T + + + + N
Sbjct: 64 DIAKI------GMFITLHWVFFYASIKYSNISVGVVCYCLTSFFTAVFDPLINRRKFNVN 117
Query: 147 QIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+++ ++L + + ++ L G+ ++S A A ++ + ++
Sbjct: 118 ELLLSVLTLAGIALIFHFDSSYQLGIGLGIISSAFAALYTLFNERIVKNYDSRLINYYQM 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + + ++ ++ +F+ +K+ TV
Sbjct: 178 IGGTIGLGILMPFYLYAFPVQTVLPDLRDIGYLVLLASFCTVGLYILFAESLKKIPAFTV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQP--IDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P+ I+ + + ++ I +V+I++V+ + ++ S
Sbjct: 238 NLSFNLEPVYAIILAFLFFNESKQLNLFFYIGLLLVMISVVLQTIVSLKKS 288
>gi|217969730|ref|YP_002354964.1| hypothetical protein Tmz1t_1309 [Thauera sp. MZ1T]
gi|217507057|gb|ACK54068.1| protein of unknown function DUF6 transmembrane [Thauera sp. MZ1T]
Length = 299
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 85/287 (29%), Gaps = 15/287 (5%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + ++ V + + R +F ++ L L + +
Sbjct: 20 IWGYNWVVMKQVIQYVDPFDFSAIRTALGAATLFVVLIALRRPLGL-------QQVREVA 72
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ +AL+ T+ + P V + L ER+ +Q +A +
Sbjct: 73 LLGVLQTGAFTALIQWALVAGGAGKTAVLVYTMPFWVVPMAWFVLGERVRGMQWVANAIA 132
Query: 155 ILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
L+++ L +A A++ + + + A
Sbjct: 133 GCGLMLVLEPWAMGGSAFSNLLAVAGGVTWAAASVQAKRMRRAHDFDLLSLTAWQMLFGA 192
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ V + + ++ + ++R G+ P
Sbjct: 193 VALCVLALLHPSRPIDPTPYFWGALVFNAVFATGLAWLLWLFVLQRLSAGVAGLSALGIP 252
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ ++ L + V ++V A+ + L ++ + + +
Sbjct: 253 MVGALAGWIELGERPTAVEFAGMALIVGALALTSLWSLRQARRASPR 299
>gi|326204553|ref|ZP_08194410.1| protein of unknown function DUF6 transmembrane [Clostridium
papyrosolvens DSM 2782]
gi|325985346|gb|EGD46185.1| protein of unknown function DUF6 transmembrane [Clostridium
papyrosolvens DSM 2782]
Length = 328
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 90/305 (29%), Gaps = 18/305 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY 73
+ S T+ G + + A L+G T ++ + R +F +
Sbjct: 6 SKKMSKSTLKGAIVILFASALFGTLGTVTGLAYQNGMAPASFAAWREAIGTIMMFILLAL 65
Query: 74 FSGGLSLLKDTLKNP---KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
G + + + + + +A YA L ++ P
Sbjct: 66 GIGRPAKEERIPFSKVSGREKRNVCIAAVAFMTFSLAIFYAFGLVTVALALLIFYTYPAF 125
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILS-------------LLIMTLHSGIPLLSLAIAVT 177
+G + KE + +I A ++ + + + L + +++
Sbjct: 126 VTIIGGITGKETITASKIGALIMALGGGVLVVVGQLIGSPVQVRVLGIILAIVAALADTV 185
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
+ + F + + +V G F +
Sbjct: 186 YFTVGRDGYPSIPPAYATIFFLFAGAIVFGIIALVTGGIESLTVPFHKPSLLPILAFAGV 245
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + GI+ S I+ P++ +V + +L Q + ++ I +V+ A
Sbjct: 246 FGAAIPTIMILSGIRMIGASRASILALFEPVVGVVLASIVLGQKMFLIQIIGGVLVLGAA 305
Query: 298 VVYLL 302
VV L
Sbjct: 306 VVLQL 310
>gi|182678389|ref|YP_001832535.1| hypothetical protein Bind_1406 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634272|gb|ACB95046.1| protein of unknown function DUF6 transmembrane [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 324
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 94/304 (30%), Gaps = 14/304 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG--LSLLK 82
+ + L G + + L + ++ R L + + +G +LL
Sbjct: 15 VFLLIASTFLMGSSFAVGKILLQAGFEPMILVGWRFLLAAFATLPFVFLENGHVMSALLP 74
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
A ++ A A+ + + F P+ LG +FL E
Sbjct: 75 ARAGWRDAALVITIGLLQTAGVMSLLFLAMRSISASTAAILLFTNPIWVAVLGKLFLGET 134
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIPVGS 192
L+ ++ L+ + + + + L + A W+ K +
Sbjct: 135 LHRTRLAGLLVGVTGVTLAIGLAPDALSGNDVSRGELTGLAAAFCWAGATIINKRAKLPF 194
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+L ++ T FL ++ F ++ +
Sbjct: 195 GSWALSFWQMLIGAVAVLIIAYASGQHWPERTTPSQWTWFLWLSIPASTGSFGLWFLALA 254
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + + APL +++S FIL + ++ ++ +A+ + S + +
Sbjct: 255 KGGATKASGYLFLAPLFAVMTSFFILGTTLSWMQAAGGLLIGLALWLMNREGSGASRRER 314
Query: 313 TKKS 316
+++
Sbjct: 315 LEEA 318
>gi|327278188|ref|XP_003223844.1| PREDICTED: transmembrane protein 20-like [Anolis carolinensis]
Length = 377
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 97/305 (31%), Gaps = 22/305 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + L+ + ++ + +EV + R ++ + V ++Y
Sbjct: 73 LGLFYTVLSAFFFAVASLFLKKIQNLHAVEVSAIRCIFQMSFVLPGMIYQK------TGF 126
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ L F + YA+ F +PV + +FLKE+ +
Sbjct: 127 FGPRNKLVFLFFRGLFGSSAMILLYYAIQVMPLADAIVITFSSPVFTSLFAWIFLKEKYS 186
Query: 145 HLQIIAALLIILSLLIMTLH----------------SGIPLLSLAIAVTWSAYCFARKTI 188
++ L I ++++ + A+A +
Sbjct: 187 LWDLLFTLFTITGVILIARPPFLFGSKVLGIEGEYTDHLRGSIAALASAVAMASTFVILR 246
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
VG S +F+ + A+ L + F+ + L LI GLL +
Sbjct: 247 KVGKSVHYFLSIWYYAVIGLIVCLIALFAMDVWALPNCGIERLLLILIGLLGLAGQIFIT 306
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ V IM+ + + + L Q V+ + ++ +
Sbjct: 307 KALQIENAGPVAIMKTMDVVFAFILQMLFLDQLPTWWTVGGALCVIASSSGTVIRKWHQN 366
Query: 309 GKNKT 313
+ +T
Sbjct: 367 SRKRT 371
>gi|323493038|ref|ZP_08098172.1| hypothetical protein VIBR0546_10254 [Vibrio brasiliensis LMG 20546]
gi|323312686|gb|EGA65816.1| hypothetical protein VIBR0546_10254 [Vibrio brasiliensis LMG 20546]
Length = 304
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 87/294 (29%), Gaps = 12/294 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIV 72
S +G IL+ I P+ + Q +++ R SLP +
Sbjct: 8 SPSAPYSTAQVGIFLALAGCILFSIKPILIKIAYQYGGDATSIMTLRAFSSLPLYLVTFI 67
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ ++ ++ LA I +L L F+ P V
Sbjct: 68 FLCRSADNRSKVRQHGVKAALVGVMGYYLASFL--DISSLAFISAQLERLLIFLFPTFVV 125
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------WSAYCFA 184
+ + ++ + + +ALL + + ++ +H + + + A+
Sbjct: 126 LISWLIYGQKPSRNIVYSALLGYVGISLIVIHDFNSAGNAVVLGSLLAIASALVFAFYLV 185
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + +V SG E +I
Sbjct: 186 WSKPLITQLGSSLFTSIGMGCAGIAILVHLLVSGSEVSQWSPALIVTGIILGIFCTVLPS 245
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + + R +T+ + P + ++ +L + I +V++++
Sbjct: 246 YLIAAAMARLTPTTLSLTSNIGPAVTAGLAIVVLDELFTVWHAIGLILVIVSVY 299
>gi|299771560|ref|YP_003733586.1| DMT family permease [Acinetobacter sp. DR1]
gi|298701648|gb|ADI92213.1| DMT family permease [Acinetobacter sp. DR1]
Length = 308
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 85/296 (28%), Gaps = 14/296 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G+ F C+ L+ ++ + +S L + + + +
Sbjct: 10 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDATVLMALRMLSALPFFLLICWFNRHHNQG 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+K + ++ L+ L F+ P ++V + S+ K++L+
Sbjct: 70 IKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIVSSLLYKQKLD 129
Query: 145 HLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ A L ++ L + + S +
Sbjct: 130 VKSLFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSLVFASAVAFAGYLLLTPPLIKKFG 189
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ Y + L + + L+ +
Sbjct: 190 SWNFTGLALTVACIGTLTHYALSTPHPIQLLLQLPSSVIWYGIGLGFLVTVLPTVMLMQS 249
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + + + +I +++ L
Sbjct: 250 IERLGASQSAMIASIGPVLTILLAVAFLNERLNMWQWVGCLLNIIGVMMITLRKKR 305
>gi|238753789|ref|ZP_04615150.1| hypothetical protein yruck0001_9000 [Yersinia ruckeri ATCC 29473]
gi|238708025|gb|EEQ00382.1| hypothetical protein yruck0001_9000 [Yersinia ruckeri ATCC 29473]
Length = 311
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 86/278 (30%), Gaps = 5/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGV--FFAIVYFSGGLSLLKD 83
F A I+W I + ++ + + +R L +L + F I ++
Sbjct: 3 VFFPLFAVIIWSINAVVSKMSATAIDPAAISFYRWLLALLTLSPFLLIGVIRNWPAIKVY 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K + + LA + + AL V I V + + L
Sbjct: 63 WWKLLILGLLGMVLYQSLAYYAAHTVSALFMGILSSMIPLLTVLISIVVLRVAPTVGIAL 122
Query: 144 NHLQIIAALLIIL--SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + L+ ++ L GI L + +Y + + +
Sbjct: 123 GSILSLGGLIWLISAGEPGQLLQQGIGKGELMMLAASISYALYGVLTKRWNIQLPSWQSL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I ++ F L L L + ++ +G+ R +T I
Sbjct: 183 YMQIVFGVLLLLPNFLLATDVQLTAQNIPLVLFAGIPASIIAPYLWIHGVMRLGANTASI 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + +V L + + + I GI + +++
Sbjct: 243 FMNLTPVFTAIIAVSFLHEQLHSYHLIGGGITLAGVIL 280
>gi|229173703|ref|ZP_04301245.1| Transporter, EamA [Bacillus cereus MM3]
gi|228609802|gb|EEK67082.1| Transporter, EamA [Bacillus cereus MM3]
Length = 309
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 89/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LIAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----------WSAYCFARKT 187
+ER + I +++ + + L + A W Y +
Sbjct: 121 KQERFSMKVQIGSIIAFIGAAFVLLTGHTEGATYEYAWLGNVIGLVAAIEWGWYPILAQP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S L + + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|169335202|ref|ZP_02862395.1| hypothetical protein ANASTE_01610 [Anaerofustis stercorihominis DSM
17244]
gi|169257940|gb|EDS71906.1| hypothetical protein ANASTE_01610 [Anaerofustis stercorihominis DSM
17244]
Length = 295
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 92/301 (30%), Gaps = 8/301 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++ G F+ + + + ++ + + ++ R + +
Sbjct: 1 MKEKTIISDRNKGVFFIILSAFCFALMNVFVRMAGDLPFIQKSFFRNFVAFFFALILMKK 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+S+ K + + AT + YA+ S ++P +
Sbjct: 61 QGIKISMPKGSKLDLVLR------ATFGTIGIFCNFYAIDHMLVSDASMLNKLSPFFVII 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVG 191
L E++ Q + + + L + GIP+ I + T
Sbjct: 115 FSYFILSEKIKPFQGLCVFIAFIGTLFVIKPGFTGIPIFPALIGIMGGMCAGIAYTYVRK 174
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ ++F + + F + L L+ GL S +
Sbjct: 175 LGTKGVKGPFIVFFFSMFSCLVSLPFLILEFTSMSPYQILILLLTGLAASGGQFFITAAY 234
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
A + I +Y+ + + S +L Q D I + I+ IA V+ L N
Sbjct: 235 THAPAREISIYDYSQIIFATILSFVLLGQIPDLYSFIGYIIICIASVIMFLYNNNKILSN 294
Query: 312 K 312
K
Sbjct: 295 K 295
>gi|305662995|ref|YP_003859283.1| protein of unknown function DUF6 transmembrane [Ignisphaera
aggregans DSM 17230]
gi|304377564|gb|ADM27403.1| protein of unknown function DUF6 transmembrane [Ignisphaera
aggregans DSM 17230]
Length = 287
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 84/287 (29%), Gaps = 9/287 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A LWG + + + + + R L ++ + IVY +
Sbjct: 5 FLAIIVATFLWGSSFPIIKIVVCGIDSFSYVWIRSLIAIAFLTPYIVYRAIC------CG 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ + + + + ++F + V ++ +
Sbjct: 59 IHRDSIYGGLVTGFAYLFGLWLQGWGTMYTSATNSAFITGLNTVFVHIYIAIARRSY--R 116
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ LL ++ L + + G + I V A +A + + V G +
Sbjct: 117 STLAIELLTAVTGLYLLTNPGRTINIGDILVLLGAIAWAIQIVLVSRYGGREPVVFTYFE 176
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + + + F + +YG K ++
Sbjct: 177 LFPSLIFSIYSTINGLPPITVTLLLGLFYLGIACSGIAFALQAYGQKYISPEIASLVYLL 236
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P+ + S L + + + + ++ I++ V + +
Sbjct: 237 EPVFASILSWIFLGETMSFTQIVGAMLIAISIAVAGIDMARMERGTR 283
>gi|296313802|ref|ZP_06863743.1| putative membrane protein [Neisseria polysaccharea ATCC 43768]
gi|296839627|gb|EFH23565.1| putative membrane protein [Neisseria polysaccharea ATCC 43768]
Length = 300
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/298 (10%), Positives = 91/298 (30%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + + + + + E++ R+L+S + A +
Sbjct: 3 TAKKDVLGSGWMLVAAACFTVMNVLIKEASAKFALGSSELVFWRMLFSALALGCAAILRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQEPAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + A + + ++ + + + ++L G G+ + K
Sbjct: 175 LAGEPGWRVVFYLSATGVAMSSVWATLTGWHMLSWQSAVYLSGIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLGEALFWQEILGMCIIILSGILSSIRPIAFKQR 292
>gi|296131293|ref|YP_003638543.1| protein of unknown function DUF6 transmembrane [Cellulomonas
flavigena DSM 20109]
gi|296023108|gb|ADG76344.1| protein of unknown function DUF6 transmembrane [Cellulomonas
flavigena DSM 20109]
Length = 313
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 85/300 (28%), Gaps = 21/300 (7%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL-- 81
M L V A + +G T L + + R+ + +
Sbjct: 1 MRPLLAVLLAAVCFGTTGTAQALGPAADPLALGAARIAVGGIALGVVAALVARRPRRAAD 60
Query: 82 -------KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ L + + + +LA FF+ T + PV++ +
Sbjct: 61 PAPGGPARRRLDRGTLTALALGALGVLAYQPAFFLGTARNGVAVGTVVALGSAPVLTGLV 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS------------LAIAVTWSAYC 182
+ R + + A L L ++++ L G + A A
Sbjct: 121 TWTTGRARPDRTWLAATGLATLGVVVLGLAPGDTPVPAGDGVDLLGVLASVGAGAAYATY 180
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + M + A V + G L + +
Sbjct: 181 TLAGAALIDAGWASTTSMGAMFGVAGVLSVGVLAAVGGGGLATPAGLLTVLWLGLVTTTA 240
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ +F YG+ R TV + PL V + +L + + V ++ +VV L
Sbjct: 241 AYVLFGYGLARLGAPTVATLTLAEPLTATVLGLAVLGERLPAVAWAGLAVLATGLVVLAL 300
>gi|229073957|ref|ZP_04207034.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
F65185]
gi|229082791|ref|ZP_04215226.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock4-2]
gi|228700517|gb|EEL53068.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock4-2]
gi|228709163|gb|EEL61260.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
F65185]
Length = 310
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 104/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKRLQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ M + + T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 64 RKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALVEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 244 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGV 288
Score = 39.9 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKRLQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S LK+
Sbjct: 61 VVHRKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGAIGVLFITIPS 143
>gi|210618043|ref|ZP_03291878.1| hypothetical protein CLONEX_04111 [Clostridium nexile DSM 1787]
gi|210149036|gb|EEA80045.1| hypothetical protein CLONEX_04111 [Clostridium nexile DSM 1787]
Length = 301
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 89/294 (30%), Gaps = 11/294 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G I WG+ + Q+L ++ ++S R++ + + +
Sbjct: 5 QRREQLRGIALTIIGGIFWGLAGVCGQYLFEERGLTAKWLVSVRLVLAGLILLLTVWA-K 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + +++F +A + A+ T + + P+I +
Sbjct: 64 QKKQMFEIWREKRDVFQLIMFGIFGMAFCQLSYYVAVETSNAGTATVLQYTAPIIIMLYV 123
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
SV K+ ++++A +L + ++ H L +A + +
Sbjct: 124 SVRNKKVPQRIEMLALVLAVGGTFLLATHGNITNLAISTETLVWGLASAVAMALYNLIPG 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G F + + ++ + F +
Sbjct: 184 ELMKKFGTFNVIGWGMLIGGIFLCVFIKPWHVIGMWDIYTVLAMAAVILVGTILSFTTYM 243
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G++ S + P+ +V + V I ++ A+++ L
Sbjct: 244 EGVRLIGASKASLFASVEPVTATFMTVVFMGAAFQFVDFIGLAGILGAVLMLSL 297
>gi|226941580|ref|YP_002796654.1| hypothetical protein LHK_02664 [Laribacter hongkongensis HLHK9]
gi|226716507|gb|ACO75645.1| DUF6 domain containing protein [Laribacter hongkongensis HLHK9]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/281 (9%), Positives = 84/281 (29%), Gaps = 6/281 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+ + + A +LW + + +++ + V++ R+ + + + +
Sbjct: 1 MLAYVALTVAMLLWASSYIALKYVFAIFDPYVVLAARMAICTLCLAPFVWSAWRRIDRQR 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + L + FV +FL +
Sbjct: 61 GDWRWLVFMALCEPCLYFLFESESLLRTSASQAGVLTAMLPVFVAVGARIFLAEHITRSL 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE-----GFF 197
+ A + L+L + + + + C +
Sbjct: 121 ALGSCVSIAGIAWLTLASEASADAPDPMLGNLLLIVALVCATGYMLVAKRLTRRYPASAL 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M F + L +P + L + + ++++G+ R +S
Sbjct: 181 TLMQSGMGTLWFGSLMLLPDVQLPTELPLLPSLVVLYLGAGITLGAYGLYTWGVSRIPVS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G+ P+ ++ + +L + ++ + G+++ ++
Sbjct: 241 QAGMFLNLIPVFTLMLAWALLGEHLNPPQWAACGLILAGVL 281
>gi|289579866|ref|YP_003478332.1| hypothetical protein Nmag_0178 [Natrialba magadii ATCC 43099]
gi|289529419|gb|ADD03770.1| protein of unknown function DUF6 transmembrane [Natrialba magadii
ATCC 43099]
Length = 315
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/309 (10%), Positives = 84/309 (27%), Gaps = 19/309 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S G V A WG + L+ + + R + + Y
Sbjct: 1 MSRARNTGLFLVLAAA--WGTAFVAISAGLDHFPPVLFAAFRYDIAGILMLAYAAYAVDD 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + V + ++A + F + ++PV++ +
Sbjct: 59 W----YPTGRAEWAVVAVGATLLIAAYHAFLFVGQQHTTAAAAAILVSLSPVLTTGFARL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFAR 185
+ L + + + L + + + + A A + R
Sbjct: 115 LMPSDALSLLGVVGVGLGLVGVAIISQPETGELLAPDVVGKLLVFCAAAAFALGSVLTRR 174
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ M A+ + + + ++ F
Sbjct: 175 IDAALPIETMEAWSMLGGALLMHLISLVLREPIEPATWTDPQALGALAYLAVVASALGFL 234
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ ++R + ++ Y AP+ +++ L + ID + F ++ + V+ +
Sbjct: 235 LYFDLLERLGAVEINMVSYVAPIFTVIAGWLYLDEVIDAATLVGFLLIALGFVLVKRRAI 294
Query: 306 INSGKNKTK 314
+
Sbjct: 295 RETLGRSRA 303
>gi|118476487|ref|YP_893638.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|229183160|ref|ZP_04310390.1| Transporter, EamA [Bacillus cereus BGSC 6E1]
gi|118415712|gb|ABK84131.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis str. Al Hakam]
gi|228600299|gb|EEK57889.1| Transporter, EamA [Bacillus cereus BGSC 6E1]
Length = 320
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|55981630|ref|YP_144927.1| integral membrane protein [Thermus thermophilus HB8]
gi|55773043|dbj|BAD71484.1| conserved hypothetical protein, integral membrane protein [Thermus
thermophilus HB8]
Length = 277
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 82/269 (30%), Gaps = 10/269 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MG L+V A LWG+ ++ E ++ L V +R L S G
Sbjct: 1 MGYLYVLLAAFLWGLIGPLSRMAFQEGLTPLTVAFYRALLSWIFFLAHAARTGGLR---- 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +F +A+ +G + A+L L S + P L FL+E
Sbjct: 57 --VAPRDLPVFPLFGLLGVALFYGAYQLAVLYGGAALASVLLYTAPAWVALLSWAFLREP 114
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY--CFARKTIPVGSSEGFFIEM 200
A L +L + ++ L G + A + F +G
Sbjct: 115 PTARSWGAVALTLLGVGLLGLGGGSEVRFGVRAFLFGLASGFFYALHYLLGKLYLGRYAT 174
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
AL E L L + F G++R +
Sbjct: 175 PTFFAYALPVAALALAPWAEFGPLTPRALGALLALSLFSTYGAYLAFYAGLRRLPATVAS 234
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
++ P++ +V + + + + +
Sbjct: 235 VVATLEPVVAVVLAYLLFGEVLSPLGYFG 263
>gi|33594138|ref|NP_881782.1| hypothetical protein BP3234 [Bordetella pertussis Tohama I]
gi|33564212|emb|CAE43500.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332383553|gb|AEE68400.1| hypothetical protein BPTD_3193 [Bordetella pertussis CS]
Length = 288
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 86/291 (29%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F A +W + + T+ ++ + +R W L G+ A G L
Sbjct: 1 MAFPLLATTIWSVNMVVTKMAADVIAPASIGFYR--WVLAGLLLAPFALPGVLRQWPQI- 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V +A++ G A T + P+++V +GS+ L+ER
Sbjct: 58 -RPNLGRLAVLGGLGMALYQGLMYVAAGTTTATNMGIITAMVPLLTVVVGSLVLRERPAL 116
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I+ A++ + L I+ G + + AY +
Sbjct: 117 TAILGAVVSLAGLGILLGEGNPLRLLALGGSRGDALMGLAALAYALYGVLLRKWPMSVGP 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + F L L L + F ++ G++ +
Sbjct: 177 WQSLFVQVLFGIVFQLPAFLLTPASSLNAQNIPLVLYAGIFPSLFAPFLWMQGVRYLGPN 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I P++ + + L + + + + +
Sbjct: 237 RASIFLNLMPVVTVAIAAAFLGETPHLYHIAGGLMALAGVSLAQWRPARRR 287
>gi|281358542|ref|ZP_06245022.1| protein of unknown function DUF6 transmembrane [Victivallis
vadensis ATCC BAA-548]
gi|281315024|gb|EFA99057.1| protein of unknown function DUF6 transmembrane [Victivallis
vadensis ATCC BAA-548]
Length = 474
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/286 (10%), Positives = 80/286 (27%), Gaps = 10/286 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + + +LW + + + VS E+ R + + +F
Sbjct: 170 LWGGFALVASCVLWSGNYVLGKLMMSQAGVSAGEISFWRFVAAGLIMFAIACATRKKKVF 229
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV--- 137
+ +G + ++ + + V +I FL
Sbjct: 230 ALTRRDAIEVIGQGMLGMCMVGLLMFQSEKLTSAINASMLDALIPVAILIGCFLIGRKLT 289
Query: 138 ---FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ + + ++ I G L + A A + +
Sbjct: 290 VGQCVGMAVSLSGCLLVIRVVTPEGIQLTRLGFADLMIVAAAACWAGYVLWGKGTLKRVD 349
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ A +V++ L + F +++ +
Sbjct: 350 SLVYTTWAMIAGAAATLVFSLLFRQPLKPPLDPEVLVLLAVLVAGPTIGAFWLWNIATRD 409
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
L + I +Y P+ I+ + +L +P+ + ++ + +
Sbjct: 410 VPLPLLNITQYLIPVCAILFAHLLLGEPLGGWQVAGMFLIAGGVAL 455
>gi|261820762|ref|YP_003258868.1| hypothetical protein Pecwa_1462 [Pectobacterium wasabiae WPP163]
gi|261604775|gb|ACX87261.1| protein of unknown function DUF6 transmembrane [Pectobacterium
wasabiae WPP163]
Length = 333
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 88/287 (30%), Gaps = 5/287 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + + LF A ++W + + + + + +R L + + ++
Sbjct: 33 SPTRNPTLNALFPTIAVLIWSVNVIVNKLSASVIDPAAISFYRWLLAFLVMTPFMLPALR 92
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ V L+ ++ + G + S +T ++S+ L
Sbjct: 93 HHAATIRQNAWKLLVLGLLGMVLYQSLAYYAAHTISAVMMGIMGSLVPLLTVLLSIPLLR 152
Query: 137 VFLKERLNHLQIIAALLIIL----SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
V + +++ I+ L GI + +Y S
Sbjct: 153 VAPTLGVLLGSLLSLAGIVWLIGEGHPEQILAQGIGPGEFMMFCAALSYALYGVLTKRWS 212
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I V+ F ++ L L + + + ++ G+
Sbjct: 213 IPLPNWVSLYVQIAFGVVVLIPNFLLTDNVELNGQNLPLVIFAGIMASIIAPFLWIQGVM 272
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
R S I P+ V ++ L +P+ + GI ++ +++
Sbjct: 273 RLGASKAAIFMNLTPIFAAVIAIGFLHEPLHHYHLVGGGITLLGVIL 319
>gi|330503947|ref|YP_004380816.1| hypothetical protein MDS_3033 [Pseudomonas mendocina NK-01]
gi|328918233|gb|AEB59064.1| hypothetical protein MDS_3033 [Pseudomonas mendocina NK-01]
Length = 285
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 82/279 (29%), Gaps = 2/279 (0%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ L + +L+G++ ++ + L + + R +++ + A + + +
Sbjct: 1 MSERNALLAIHLGALLFGLSGIFGK-LAATTPNMIAGGRAFFAVIALALAALLWR-SRNA 58
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ +L+ + + V + + L S+ V+ L
Sbjct: 59 VRPSLRQMALLALGGLLLGTHWVTFFEAVKVSGVAIATLGFASFPAFTVLLEGLLFRERT 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + ++ + + L AV + S+ G
Sbjct: 119 RPGEFAMVGVVCVGLILVTPEFSLDSGATVGLLWAVLSGFLFALLSLLNRASTRGLDPVK 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + + + + +F ++ K T
Sbjct: 179 AALYQNITVLLCFLPLAWPSLPSVRPVDWLWLAMLGIFCTGLAHSLFVASLRVLKARTTA 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P+ I+ + ++ + ++V A+ V
Sbjct: 239 VIFALEPVYGILFAWWLFSEQPTLRMLAGGLLIVSAIFV 277
>gi|329849627|ref|ZP_08264473.1| hypothetical protein ABI_25220 [Asticcacaulis biprosthecum C19]
gi|328841538|gb|EGF91108.1| hypothetical protein ABI_25220 [Asticcacaulis biprosthecum C19]
Length = 294
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 84/284 (29%), Gaps = 1/284 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + L+ + V+ +I+ RV + ++ L +
Sbjct: 6 LIVLAAIWGSSFLFMRVAAHEVAPPFLIALRVGLGALLLVAVALWQRKALDIRAHWKHFL 65
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ L + A L T+ + + ++ K L +
Sbjct: 66 ILGLLNTAVPFTLFAFAAQTLPASLMSILNATAPIFGTVISVVWLRTAMTWKSGLGLVLG 125
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
IA + I++ L T+ GI L A Y A S F A
Sbjct: 126 IAGVAILVGLDTATVSPGILLAVGAGLAAGFLYGLASVYAKQAKSVDGFSNAHGSLWAAC 185
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
++ + + L + + ++ I + + + + P+
Sbjct: 186 LFMFPVAPFYAPAVAVSVPVIWSIVAVGILCSGIAYLLYFNLIDQIGAAPTLSVGFLIPV 245
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ IL +PI + +V++ + + + K
Sbjct: 246 FGVLWGALILHEPIGLQTVLGGAVVLVGTALITGFNPLAMIRRK 289
>gi|257095857|ref|YP_003169498.1| hypothetical protein CAP2UW1_4333 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048381|gb|ACV37569.1| protein of unknown function DUF6 transmembrane [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 314
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 89/299 (29%), Gaps = 18/299 (6%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG T + + + + S L V S R L + + +V G
Sbjct: 18 LVATAVVWGATWIAGRVAVSEASPLAVASWRFLLAALVLGTLVVIHEGWPRWSLAEWLT- 76
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ A+ + ++ F+Y L + + +TP + + ++ ++
Sbjct: 77 ----LAAMGASGIFLYNLCFLYGLKLIEAGRGALVVALTPAVVAAGDWLLFGAPMSPMKA 132
Query: 149 IAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + L++ + G L+ + R+ S
Sbjct: 133 AGIGVAMFGCLVVVTNGDPRLLFTGQVGLGEWLIIGCSVLWAVYTFVGRRGTRSLSPLAM 192
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V L S + + + F ++ ++R
Sbjct: 193 TFGASVTGWLMLTAAALLQGSLFSLAGTTWHAWSAIVFLGLFGTALAFTWYAEAVQRIGP 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ + P+ ++ +L + ++ +V+ +++ + K+K+
Sbjct: 253 TRSAVFINLVPVSAVILGALLLDERLEVAVLTGGALVITGVIITNQAGARPAAGVKSKE 311
>gi|228956888|ref|ZP_04118669.1| Transporter, EamA [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802731|gb|EEM49567.1| Transporter, EamA [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 316
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 99/306 (32%), Gaps = 23/306 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFLLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 ISFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNIRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
Query: 309 GKNKTK 314
+ + +
Sbjct: 309 MEQEKQ 314
>gi|222096837|ref|YP_002530894.1| membrane protein [Bacillus cereus Q1]
gi|221240895|gb|ACM13605.1| Integral membrane protein domain protein [Bacillus cereus Q1]
Length = 274
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/274 (9%), Positives = 87/274 (31%), Gaps = 10/274 (3%)
Query: 40 TPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSA 98
+ +++ L+ + L ++ R + + ++ + T++ +
Sbjct: 1 MYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKITEKKQKKT-VTIRKKDWLLFAWIGF 59
Query: 99 TILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL 158
+ S TP V ++ LKE+L ++++ ++ + +
Sbjct: 60 IGYFISITCQFIGTKLSDAHTGSLVTSATPAFIVIFAAIILKEKLTARRLLSTIIATIGV 119
Query: 159 LIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+I+ G +L A + + SS ++ +
Sbjct: 120 IIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASARFSSLVITTYAIFFSLFFITP 179
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ F + L + + F +++ G++ S + + P++
Sbjct: 180 FMVWEFQSNPIEHMTLYVILGVLYLGIVSTAGAFFLWNKGLELIDASIGSLFFFCQPIIG 239
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +L + +++ I +++ ++ +
Sbjct: 240 SLLGWLLLNETLNSNFFIGGILIICSVFITTFEK 273
>gi|300948275|ref|ZP_07162391.1| integral membrane protein DUF6 [Escherichia coli MS 116-1]
gi|300452197|gb|EFK15817.1| integral membrane protein DUF6 [Escherichia coli MS 116-1]
Length = 326
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 95/308 (30%), Gaps = 19/308 (6%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLW 62
G K +S S P + + ++W + ++ + + + + + R ++
Sbjct: 16 GERKLHTGSLMSAAGKSNP--LAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIF 73
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+F ++ G ++ L + G +AL++ +
Sbjct: 74 GALVLFIVLLLRGRG-------MRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAI 126
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------- 175
+ P V ++FL ERL Q A L+ L ++ + S+ A
Sbjct: 127 LSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSG 186
Query: 176 --VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
SA R + + + AL V
Sbjct: 187 VSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALA 246
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
L + + ++ + +K S + P+ ++ S ++L + V ++
Sbjct: 247 YSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLI 306
Query: 294 VIAMVVYL 301
V+A+ +
Sbjct: 307 VLALALVS 314
>gi|224536832|ref|ZP_03677371.1| hypothetical protein BACCELL_01708 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521554|gb|EEF90659.1| hypothetical protein BACCELL_01708 [Bacteroides cellulosilyticus
DSM 14838]
Length = 288
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 95/292 (32%), Gaps = 16/292 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ PL+T + ++ +R L+++ + ++
Sbjct: 1 MNKVNGFLYGLLSSASFGLIPLFTIPAMHQGMQFWSILLYRFLFAMLALACILLLDKQSF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + L + + + + + +F+ PV++ + +F
Sbjct: 61 RIRRKEILPLLLLAFLYDCSAVFL------FWGYKFMSSGVATTIHFMYPVLTTLIMMIF 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCFARKTIPV 190
+E+ + +I A L + + ++ GI ++ L+ + +
Sbjct: 115 FREKKSPWRIAAIALAVSGVFFLSHGDTTGTVTLLGIFIVLLSALGYALYLVTVSQLKSL 174
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
L L + G I ++ +
Sbjct: 175 EMKGLKMTFYVFLFGGILLFTGMTVTGVGVQAIPDRITLGNLVMLALVPTVISNLALVRA 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
IK + ++ P+ + + I +P + G+++ A+ V +L
Sbjct: 235 IKNIGSTLTSVLGAMEPVTAVCVGILIFGEPFTQSIALGIGLIISAVTVIIL 286
>gi|213156142|ref|YP_002318562.1| hypothetical protein AB57_1180 [Acinetobacter baumannii AB0057]
gi|215484123|ref|YP_002326348.1| hypothetical protein ABBFA_002448 [Acinetobacter baumannii
AB307-0294]
gi|301345620|ref|ZP_07226361.1| hypothetical protein AbauAB0_05233 [Acinetobacter baumannii AB056]
gi|301510888|ref|ZP_07236125.1| hypothetical protein AbauAB05_04896 [Acinetobacter baumannii AB058]
gi|301596263|ref|ZP_07241271.1| hypothetical protein AbauAB059_10624 [Acinetobacter baumannii
AB059]
gi|332855596|ref|ZP_08435950.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332868043|ref|ZP_08437978.1| putative membrane protein [Acinetobacter baumannii 6013113]
gi|213055302|gb|ACJ40204.1| hypothetical protein AB57_1180 [Acinetobacter baumannii AB0057]
gi|213989015|gb|ACJ59314.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332727365|gb|EGJ58800.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332733591|gb|EGJ64752.1| putative membrane protein [Acinetobacter baumannii 6013113]
Length = 298
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 94/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F + V V+ R L +
Sbjct: 16 KALLCLMTSALLFSIMGVCIRFASETVDNATVVFFRNAVGLFIFIPMLF-------KQGL 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 69 DFIKTDKLWMHTWRSIVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + +L+ + + A + V + ++
Sbjct: 129 TKSMIFAAVIGLIGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + LI GLL + SY A +G M
Sbjct: 189 FYFCVFGSLISSIPMFWHWRIFTWHELALLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 249 YIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILL 284
>gi|148827364|ref|YP_001292117.1| hypothetical protein CGSHiGG_03745 [Haemophilus influenzae PittGG]
gi|148718606|gb|ABQ99733.1| hypothetical protein CGSHiGG_03745 [Haemophilus influenzae PittGG]
Length = 296
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/293 (19%), Positives = 118/293 (40%), Gaps = 5/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 5 IQGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSL 64
Query: 84 TL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + + F++A L +G + YF+ P+I LG +L
Sbjct: 65 ITITLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE L+ +Q IA LL + H+ ++ V + + I
Sbjct: 125 KECLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKLMKIPALQGIT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ I ++ S L L G++++ ++ +S
Sbjct: 184 LDIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIF 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 244 AVLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 296
>gi|310657844|ref|YP_003935565.1| hypothetical protein CLOST_0534 [Clostridium sticklandii DSM 519]
gi|308824622|emb|CBH20660.1| conserved membrane protein of unknown function [Clostridium
sticklandii]
Length = 293
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/297 (8%), Positives = 89/297 (29%), Gaps = 14/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + + WG + + T+ L ++ ++ R +++
Sbjct: 2 TKQLKADIALLLVTVGWGASFILTKNSLSELQSYNFLALRFIFAFFISAVIYY------- 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + +L + F + ++F + ++ ++
Sbjct: 55 -KKIISIDKFTLKHGILLGLLLFATYAFQTVGINYTTASKSAFITGFSVILVPIFSAIIA 113
Query: 140 KERLNHLQIIAALLIILSLLIM-----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++ N L +I+ L L ++ I + + + A +E
Sbjct: 114 RKLPNLLTVISVALAFSGLALITLNQDVGGLNIGDIYTGVCAVFFAIYIILVGKFTVKAE 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + ++ + + I + S + + + K
Sbjct: 174 SIAFAIVQIGVVGFLSLIVSLAIETPTVPVSLPVWINLAILSLVCTSGAYIVQNVAQKYT 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ P+ + + + + + ++ ++V+ M++ L K
Sbjct: 234 SATHTALIYTCEPVFAAIFAYLAVGEVLGVKGSMGAVLIVVGMLLIELDIPKLLYKK 290
>gi|309795798|ref|ZP_07690213.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
145-7]
gi|308120677|gb|EFO57939.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
145-7]
Length = 307
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/299 (16%), Positives = 107/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + +Y Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVYAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|293610380|ref|ZP_06692681.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827612|gb|EFF85976.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 332
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 89/300 (29%), Gaps = 22/300 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLE----VISHRVLWSLPGVFFAIVYFSGGLSL 80
+G+ F C+ L+ ++ + +S L +++ R+L +LP +
Sbjct: 34 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDGTVLMALRMLSALPFFLLICWFNRHH--- 90
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+K + ++ L+ L F+ P ++V + S+ K
Sbjct: 91 -NQGIKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIVSSLLYK 149
Query: 141 ERLNHLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARK 186
++L+ A L ++ L + S +
Sbjct: 150 QKLDVKSFFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSFVFASAVAFAGYLLLTPPLI 209
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ Y + L + + L+ +
Sbjct: 210 KKFGSWNFTGLALTVACIGTLTHYALSTPQPIQLLLQLPSSVIWYGIGLGFLVTVLPTVM 269
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + I + ++ +++ L
Sbjct: 270 LMQSIERLGASQSAMIASIGPVLTILLAVAFLNEHLNMWQWIGCLLNIVGVMMITLRKKR 329
>gi|320012726|gb|ADW07576.1| protein of unknown function DUF6 transmembrane [Streptomyces
flavogriseus ATCC 33331]
Length = 316
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 82/278 (29%), Gaps = 8/278 (2%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F A LWG + + + LE + L++ S R++ V + L K
Sbjct: 9 FGLLAA-LWGCSFAFIKMSLEAFAPLQLASGRLIVGALVVLGMLALKRLTLPSRKLWGHI 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH-- 145
A L A + + + ++
Sbjct: 68 AVASVFGNVIPFTLFAIGEQHTTATIAGVIQGATPLITMGVAALALSEERPTTRKVAGLV 127
Query: 146 --LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ ++ + G A A ++ + R+ I + L
Sbjct: 128 GGFIGLIVVVGPWNTDGFGTLGGQLACVGAAASYAVSFVYIRRFIGPHKLPALSVTAAQL 187
Query: 204 AIPALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A+ VV F G H L P L+ F + + I A +T
Sbjct: 188 SAAAVITVVVTTFMTGWTLHGDLTAKPLLSLLVLGAASTGIAFALLNRLIADAGPTTASG 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P+ ++ V L +P+ + +V+ A+ V
Sbjct: 248 VNYLVPVFSVIVGVLALGEPLTWNVPVGGIVVIAALAV 285
>gi|228906578|ref|ZP_04070454.1| Transporter, EamA [Bacillus thuringiensis IBL 200]
gi|228853127|gb|EEM97905.1| Transporter, EamA [Bacillus thuringiensis IBL 200]
Length = 320
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAIIPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISITLFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNLGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPRTAIIPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISITLFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|228951322|ref|ZP_04113432.1| Transporter, EamA [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228808375|gb|EEM54884.1| Transporter, EamA [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 303
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R L ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWLIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 285
Score = 36.4 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WLIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|269128978|ref|YP_003302348.1| hypothetical protein Tcur_4793 [Thermomonospora curvata DSM 43183]
gi|268313936|gb|ACZ00311.1| protein of unknown function DUF6 transmembrane [Thermomonospora
curvata DSM 43183]
Length = 300
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 71/285 (24%), Gaps = 9/285 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + ++WG+ L + +E VSV ++ R + + L +
Sbjct: 4 RGWVLFALMSVIWGVPYLMIKVAVEGVSVPVLVFARTALGALVLLPLALRGGARGGLRRR 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
A ++ + V +V + ER
Sbjct: 64 HWPPLAAFAVIEMVIPWGLLSDAER----HLTSSMTGLLIAASPVVAAVLTYLIDDTERF 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + + + ++ I V + +
Sbjct: 120 TLTRWTGLAVGLAGVAVLAWPELRGGALWPITEVLLVAACYAIAPVVALRRLQDVSSLHM 179
Query: 204 AIPALFYVVWNGFSGGEHFFL----GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L + + + F ++ I+ +
Sbjct: 180 TAACLTLAALCYTPPAILTWPDALPSGRVLAALAGLGLICTALAFIVYFALIREVGAARA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ Y P + + + V +L +P+ I F +++ ++ T
Sbjct: 240 LVFTYLNPAVAVAAGVLLLDEPLTVTILIGFALILGGSIMATRRT 284
>gi|171463342|ref|YP_001797455.1| protein of unknown function DUF6 transmembrane [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171192880|gb|ACB43841.1| protein of unknown function DUF6 transmembrane [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 382
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 80/304 (26%), Gaps = 9/304 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
S + + G L +L+ + + + + F +++
Sbjct: 5 SAAHHHRRYLYGILMAGVGSMLFSGKAILVKLAFGYGANAETLLALRMLMALPLFWGIFW 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + L L ++TP I + +
Sbjct: 65 WESRRKEMSPITWLDRGKLFFLGFLGYFLSSYIDFLGLQYISAGLERIVLYLTPTIVLLI 124
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGI---------PLLSLAIAVTWSAYCFAR 185
LK+ ++ LQ A ++ + + I+ + L A +++AY
Sbjct: 125 SYFVLKKPISRLQWYALVVGYIGVFIVFIQDASSTGISAWLGMFLVFGSACSYAAYMIGA 184
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + A L + F L+ L
Sbjct: 185 GEMVKRIGSVRLVVYASSASAVLSIAQSTIHNPSAIFEQLPQIYWYNLLTASLCTVIPML 244
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ I R V P+ I IL +PI + +V+ AM + + V
Sbjct: 245 LIMIAINRIGSPLVAQAGILGPVSTIFMGYLILAEPITWTQISGMALVIAAMWLLVRNDV 304
Query: 306 INSG 309
Sbjct: 305 PRKK 308
>gi|159184913|ref|NP_354760.2| hypothetical protein Atu1776 [Agrobacterium tumefaciens str. C58]
gi|159140192|gb|AAK87545.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 267
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 77/243 (31%)
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ + + + + + + A F
Sbjct: 1 MFGLVALPLIRKRNDRWVDIVKTTNRPLWIIRFFSAGIGAVGSVTAFTHLSMAEAFALIF 60
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
+ P + VFLKE++ + A ++ L +LI+ L + + + A
Sbjct: 61 LLPSFVTIMSVVFLKEQVGIRRWSAVIIGFLGVLIILRPGFRELGVGHLGAIVAGFGGAL 120
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + + L + +G + F + L L GYGLL +
Sbjct: 121 SIVIFRAMGPSEKNVSLYGAGVLGCLAISGVAMIPTFVMPGGEQWLLLAGYGLLGALGNV 180
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y + A + +G +Y+ L I+ I ID I ++V + ++ L+
Sbjct: 181 LVMYAAQYAPAAMIGPTQYSQMLWAILFGYLIFGDRIDGWMLIGIALIVGSGLLTLIREK 240
Query: 306 INS 308
Sbjct: 241 QRK 243
>gi|186474510|ref|YP_001863481.1| hypothetical protein Bphy_7485 [Burkholderia phymatum STM815]
gi|184198469|gb|ACC76431.1| protein of unknown function DUF6 transmembrane [Burkholderia
phymatum STM815]
Length = 294
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 81/286 (28%), Gaps = 4/286 (1%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G F+F + +L+ ++ L + + E+I R+L+ L F
Sbjct: 9 STGKTRKLRGIAFMFHSILLFTVSYLLAKTISTKYPPNELIFFRMLFGLIPAAFVFQTRR 68
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + A I G L T + + FV VFL
Sbjct: 69 IQWKKPTIHRLAGHFLRAVTGLAGIGLFIAGLPYVPLSTAVTLKETEAIFVCFFGIVFLA 128
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
F + ++ I + SA A I V
Sbjct: 129 ERFRLPTAIASMCGLVGVA---VVCSPFTGDGSSPRGIILILLSAIFSAGSLIQVKRLSR 185
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + + +G S + N+ D + +GL + + I
Sbjct: 186 VEEPAAIVLYYTITATLVSGMSLVTAWVKPNLTDFWHMFLFGLTAGVAQLMLTIAIASLT 245
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
V Y + I+ L + I + I++ +++
Sbjct: 246 TPIVASFSYLGIVWAIIFDYLTLGEVISRQAALGSLIIIASVLYLS 291
>gi|145637231|ref|ZP_01792893.1| hypothetical protein CGSHiHH_00908 [Haemophilus influenzae PittHH]
gi|145269676|gb|EDK09617.1| hypothetical protein CGSHiHH_00908 [Haemophilus influenzae PittHH]
Length = 296
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/293 (19%), Positives = 119/293 (40%), Gaps = 5/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 5 IQGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSL 64
Query: 84 TL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + + F++A L +G + YF+ P+I LG +L
Sbjct: 65 ITITLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KERL+ +Q IA LL + H+ ++ V + + I
Sbjct: 125 KERLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGIT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ I ++ S L L G++++ ++ +S
Sbjct: 184 LDIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIF 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 244 AVLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 296
>gi|118589382|ref|ZP_01546788.1| hypothetical protein SIAM614_07553 [Stappia aggregata IAM 12614]
gi|118438082|gb|EAV44717.1| hypothetical protein SIAM614_07553 [Stappia aggregata IAM 12614]
Length = 301
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 93/295 (31%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P ++G+L++ A + + + + Q+ V E++ + F +
Sbjct: 12 HPNIIGSLWMVAAMAAFALEDAFVKQAATQLPVSEILVLFGIGGTIAFFGLATATREKVL 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + V AL T+ TP+ V S+F
Sbjct: 72 NRDVFSKVMQVRFAFELVGRLFYV------LALALTPLSSTTAILQATPIFVVLGASLFF 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + A + ++ +LI+ + L+I F+ + + ++
Sbjct: 126 GETVGWRRWTAIFIGLVGVLIVLRPTSDSFSLLSILAVIGMLGFSGRDLASRAAPATLST 185
Query: 200 MCVLAIPALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ L ++ G F + + L F + ++ ++
Sbjct: 186 NILGFYGFLTIIIAGLVYGLWDRSAFLVPGTTALIALGSAVFCGVFAYSALMKAMRTGEI 245
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+TV Y+ L ++ + IDT + ++V + + L +
Sbjct: 246 ATVTPFRYSRLLFGVLLGTVWFNEKIDTQMLVGCAVIVGSGLFILWRGNKAKARR 300
>gi|113971036|ref|YP_734829.1| hypothetical protein Shewmr4_2701 [Shewanella sp. MR-4]
gi|113885720|gb|ABI39772.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-4]
Length = 283
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/289 (15%), Positives = 109/289 (37%), Gaps = 10/289 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +L L + LE V +++ +R L++ V + G L L
Sbjct: 4 LLMILAAQLLIASGNLLVKLLETNAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP--- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A ++ + F+ A+L + + +P++ + L + FL ER+ +
Sbjct: 61 ----FYKVHLSRALLIGLGNAIFMLAVLHLPLATVTAVIYTSPLLLLLLSAFFLNERIGY 116
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +A ++ +L+++ + A A ++ + + L
Sbjct: 117 RRTVAGIIGFTGILLISQP--TEFNLYIGLAFFGAMTSATNSLILKAYSTHEHPFSTLFW 174
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
F +V+ + ++P + GL + + + +RA S + +EYT
Sbjct: 175 SNAFAMVFLIPATWYEGADFSLPVAQVGLALGLFYIGMTYLIIHAYRRADASQMAPVEYT 234
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + L + + V I G+V+ + ++ + K++
Sbjct: 235 GLIFAALFGWWFLDEHLSIVVCIGIGLVIFSSILPSYSELKAKWKSRRS 283
>gi|295696853|ref|YP_003590091.1| protein of unknown function DUF6 transmembrane [Bacillus tusciae
DSM 2912]
gi|295412455|gb|ADG06947.1| protein of unknown function DUF6 transmembrane [Bacillus tusciae
DSM 2912]
Length = 308
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 91/293 (31%), Gaps = 10/293 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF+ A + W L+ L +S + + R + ++ +
Sbjct: 6 VLFLTLANLFWAGNYLFGAALAPVISPGALTTVRWWIAFMVLWPFVKREWARPGSPGPQA 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ G++ + T + + AL S + P + L +++ R++
Sbjct: 66 IRRRFGGLVFLAVTGVGGYGFILYEALHHTSPVNASLISGINPALIAALAAIWQGNRISA 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LQ+ ++ + ++++ + + + + +P E
Sbjct: 126 LQVTGLIVSLAGVVVVVSRGDWSVLAGLRLNPGDWLMLLCVLLWAVYSLYVPRVQREVGT 185
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + I + + ++ G+ R
Sbjct: 186 MATAWVTSGIGAVIGLIPAALDWNLQALPITWVGLAYIGVFASVLAYVCWNAGVMRIPAG 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
GI P+ + + +L QP+ V+ + +VV + + L G+
Sbjct: 246 QAGIFMNLLPVFTLFMA-MLLGQPVRMVQWLGGALVVAGVTLTLTAGRSRKGR 297
>gi|187735524|ref|YP_001877636.1| protein of unknown function DUF6 transmembrane [Akkermansia
muciniphila ATCC BAA-835]
gi|187425576|gb|ACD04855.1| protein of unknown function DUF6 transmembrane [Akkermansia
muciniphila ATCC BAA-835]
Length = 304
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/301 (9%), Positives = 84/301 (27%), Gaps = 6/301 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+S +G I+WG T + T+ L + + V+ R + ++
Sbjct: 2 SSRQRTLGHAAALMTIIIWGTTFVSTKVLLRDFTPVTVLFTRFVIGYAFLWCLKPRVLPF 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K+ L + + + + + + + + F + +
Sbjct: 62 SGWKKELLFAGAGLTGVTLYFLLENIALTYTFASNVGIIVAVVPFFTALLAHFLLKGEGF 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L + +I++ L LA+ + ++ +G +
Sbjct: 122 SRRFFLGFSAAFTGIFLIMANGAFVLELNPAGDILALGAAFVWAAYSILMKKIGVNTSNM 181
Query: 198 IEM-----CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + + + + L ++ F ++ ++
Sbjct: 182 IICTRRIFFYGIALMIPALWVLPANMDWRLMAKPVNAINLLYLGLFASALCFLTWNRVVE 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ Y P++ +V+S IL + + + + + + + K
Sbjct: 242 ILGAVKSSVYIYMIPVVTVVASAIILGERLTWISLAGILLTLCGVTISEYRKKTRKSGKK 301
Query: 313 T 313
Sbjct: 302 R 302
>gi|157364191|ref|YP_001470958.1| hypothetical protein Tlet_1337 [Thermotoga lettingae TMO]
gi|157314795|gb|ABV33894.1| protein of unknown function DUF6 transmembrane [Thermotoga
lettingae TMO]
Length = 273
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/280 (10%), Positives = 90/280 (32%), Gaps = 17/280 (6%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+++ + ++W + T+ ++QV + R L + K +
Sbjct: 3 YVYLLFSLLMWSSMEVLTKPLMQQVDPFFLTFFRFLVGGIFLVIFA----------KKKI 52
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A + + V ++ + P+ KE+LN
Sbjct: 53 SLKDAGVLALIGCLNGVVSMSLLQLSIKFSNASTAATLVATNPLFVSIFAFALGKEKLNF 112
Query: 146 LQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + ++ ++ + +++ + + + A+T++ Y K +
Sbjct: 113 KKFVGVVVGLIGIFVLSYGKVEGDSTFGLICGVGAAITFALYTVLMKDFTLKYGSMNATA 172
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L ++ + + + + L + + F +++ S
Sbjct: 173 FSTLFAGIVYGAILLLAGKLDIPEVALNGWIILLYSAIFVTGLAYVTFFKAVEKLGPSRA 232
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ Y P + + IL +P+ + + I+++A+ +
Sbjct: 233 SLVFYLKPAVASFFAFLILSEPVGIFKFVGTAIIIVALFI 272
>gi|29832425|ref|NP_827059.1| integral membrane protein [Streptomyces avermitilis MA-4680]
gi|29609544|dbj|BAC73594.1| putative integral membrane protein [Streptomyces avermitilis
MA-4680]
Length = 358
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 81/284 (28%), Gaps = 9/284 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G +LWGI L + ++ +S V+ R + V G ++
Sbjct: 2 TARGWFLFSLMGVLWGIPYLMIKVAVDDMSPSMVVFTRCALGAALLLPFAVRQGGLTRVV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + A ++ + + T V V E
Sbjct: 62 RAHWRPMLAFAVVEIIGPWWTLTDAERHLSSSTAGL----LIAGVPIVGIPLARFFGDTE 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL + L + ++++T+ + ++A + + +
Sbjct: 118 RLGARRTTGLALGLAGVVVLTVPHLTGGDARSLAEVLLTVLGYATAPLIIARYLKPVPTL 177
Query: 202 VLAIPALFYVVWNGFSGGEHFFL----GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L P L + + F +F I+ A +
Sbjct: 178 QLIAPCLVLAALVYAPAAALTRPTAVPSASVLASLAGLGVICTALAFVVFLELIREAGPT 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ Y P + + + V +L +P+ FG++++ +
Sbjct: 238 RAMVFTYVNPAVAVAAGVALLDEPLTAGILAAFGLILLGSFLAT 281
>gi|27375534|ref|NP_767063.1| hypothetical protein bll0423 [Bradyrhizobium japonicum USDA 110]
gi|27348671|dbj|BAC45688.1| bll0423 [Bradyrhizobium japonicum USDA 110]
Length = 304
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 82/285 (28%), Gaps = 7/285 (2%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI 71
K LS + + G + + ++ +FL V V L + +
Sbjct: 5 KNLSAYDDRSARLAGIALMVLSIFMFSFGDAMGKFL--VGTYSVGQLLFLRACAALLLLS 62
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + +V S +A A + Y P+
Sbjct: 63 PLIWRQRRQFLHLERPRLQLFRVVLSTLEVAAF----FLATVYLPLADVITYYLAGPIFV 118
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ ++FL E++ + A L+ ++I S + A+ + FA +
Sbjct: 119 TAMSAIFLSEKVGWRRWTAILIGFCGVVIALRPSAQTVSLPALIALGGSLSFATLMLITR 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + + ++ H+ + G ++ + +
Sbjct: 179 SLRKTPDIVMASSQFVGTFL-LGAVLSAFHWVPPTSGSLVIFALAGCISVTALFCVNRSL 237
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
K A S V +Y+ + ++ + + I++ A
Sbjct: 238 KLAPASVVVPYQYSMIVWAVIFGFVVFGDVPSIATIVGAAIIIGA 282
>gi|159903245|ref|YP_001550589.1| integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9211]
gi|159888421|gb|ABX08635.1| Integral membrane protein, DUF6 [Prochlorococcus marinus str. MIT
9211]
Length = 295
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 85/289 (29%), Gaps = 15/289 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ ++G + + + + + + + LE + V E+I R SL +
Sbjct: 2 SIKEKEILGFQSLIASALAFSLMTVCVKKLEGRIPVAELIFIRSAISLLI--------TR 53
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L +L+ + AL+ + + P +
Sbjct: 54 FLMKQLKVNPWGTNKKLLLIRGVMGTGALFCIFKALMLLPLSTATVIQYSYPTFTAISAK 113
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPV 190
+FL E++ ++A ++ + + ++ G L A A + V
Sbjct: 114 LFLGEKIRKRILVAIMMGWVGITLVVHPLRGESIGGGQNLFAIGIALMGAVLTALAYVSV 173
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ ++ L + + L+L+G GL + G
Sbjct: 174 RKLSKKEHPLVIVHYFPLVSAPICLPFLFSEGVIPLGMEWLWLLGIGLFTQLGQVWITKG 233
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + YT + + + + ++ V A ++
Sbjct: 234 LSLLPAAQASSINYTQVIFATIWGMLFFSEFLNIYVVTGAICVFGATLI 282
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 42/117 (35%)
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
T+ V EG ++ I + ++ F + + L+ G++ +
Sbjct: 23 LMTVCVKKLEGRIPVAELIFIRSAISLLITRFLMKQLKVNPWGTNKKLLLIRGVMGTGAL 82
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ LST +++Y+ P +S+ L + I + + + + + +
Sbjct: 83 FCIFKALMLLPLSTATVIQYSYPTFTAISAKLFLGEKIRKRILVAIMMGWVGITLVV 139
>gi|298368637|ref|ZP_06979955.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282640|gb|EFI24127.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 297
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 88/297 (29%), Gaps = 14/297 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIV 72
+ +G+ ++ A + + + L + + E++ R+ ++ +
Sbjct: 2 SSPQTNKDPLGSCWMIAAALCFTLMNLCIKAAAQKFGLYSGELVFWRMSFAAAVLGITAK 61
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + I + YA++ + + +
Sbjct: 62 AQGRTF--------STPHWKTHLNRSVIGSAAMLCLFYAVMHLPLATGVTLSYTSSIFLA 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ KER+ +L ++++ SG +LA + +A +
Sbjct: 114 VFSFLIFKERIAPYTQAVLVLGFAGVVLLLNPSFGSGQETAALAGLAGGAMSGWAYLQVR 173
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S G V V+ G++ + + +L GL +
Sbjct: 174 ELSLLGEPGWRVVFYFSVTGMVLGAGWAAATGWHIPTADMLPYLCAVGLSALVAQLSMTR 233
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
K TV + Y + ++ + +L I I+V + ++ + +
Sbjct: 234 AYKVGNKFTVASLSYLTVVFSSLAGIVLLGDKITWQEIAGMVIIVASGILSGIKPIW 290
>gi|256395063|ref|YP_003116627.1| hypothetical protein Caci_5928 [Catenulispora acidiphila DSM 44928]
gi|256361289|gb|ACU74786.1| protein of unknown function DUF6 transmembrane [Catenulispora
acidiphila DSM 44928]
Length = 326
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 75/283 (26%), Gaps = 2/283 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L ++WGI L + LE + ++ R + + G ++
Sbjct: 2 SKRGWLLFAAMSVIWGIPYLLIKVALEGMPAPFIVFARTAIGAAVLLPVA-WKRGMVAPA 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ A L + L + + + +FV ++ +
Sbjct: 61 LKHWRYIAAFAALEIAGPWLLLGDAEQHMTSSLAGLLIAAVPFFVALLMWRLGDRSAVSG 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I ++ + + + + IAV +
Sbjct: 121 TRLAGLFIGMAGVVAIVGLNIGQVQVLRMLEVIAVAVGYAIAPIIADRKLVGVPTLATIT 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ V + + + F +F I + +
Sbjct: 181 LSLTGVALLYVPIAAFSHPTHMPKANALGAVVGLGLVCTAAAFLLFFALIGEVGPAKSSM 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + P + + V L + I + +V+I +V+ L
Sbjct: 241 ITFVNPAVAVSGGVLFLGETIKAGVIVGAPLVMIGLVLSTLRR 283
>gi|170724480|ref|YP_001758506.1| hypothetical protein Swoo_0110 [Shewanella woodyi ATCC 51908]
gi|169809827|gb|ACA84411.1| protein of unknown function DUF6 transmembrane [Shewanella woodyi
ATCC 51908]
Length = 326
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 91/300 (30%), Gaps = 19/300 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVY------ 73
T G L +LWGI + T LE + ++ R + +
Sbjct: 2 SNTQKGWLAAIFVGLLWGIPWIVGTPILEVMDPQVLVWLRYTVAFITLGLIFNIGLASGK 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + +L + P++ +
Sbjct: 62 MTKKADFKLNWQNRNDIFWAACCGIIGQGSFSFLSFLSLDYITASENGVIQGLIPILILS 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G + ER +Q++ AL L + I+ + I A +
Sbjct: 122 VGFLRHNERFTVMQMMCALGAFLGVAILVMDPQSETQGFNIGHLICFGSAASFACMAYAR 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHF------------FLGNIPDTLFLIGYGLLNS 241
+ +A +V + G F F + +I ++
Sbjct: 182 AKLAEKYGSVATMFHQFVFASLGFGLYLFVVGADFSSALNVFSSPLRIMCIVILGVCISG 241
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ YG++R + G+ PL + +VF L + + +R + +V+ +M+ ++
Sbjct: 242 MSYLVYIYGMERVGVDGTGMALNLMPLSSFILAVFALGEQVTPMRLVAIAVVITSMIAFM 301
>gi|83952175|ref|ZP_00960907.1| Possible transporter, RhaT family protein of the DMT superfamily
[Roseovarius nubinhibens ISM]
gi|83837181|gb|EAP76478.1| Possible transporter, RhaT family protein of the DMT superfamily
[Roseovarius nubinhibens ISM]
Length = 296
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/295 (9%), Positives = 79/295 (26%), Gaps = 9/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G L + A + + +++ + + ++ L A +
Sbjct: 1 MDNLRGALLMVLAMTGFAFEDAFIKYMAADLHIGHILMLLGLGGTVIFALASALQGQPVV 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + A I V L L S P+ ++F+
Sbjct: 61 TRALVSKPILLRNLGELIAAIGFVTA------LSMADLSLVSAILQANPLAVTLAAALFM 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + A + L +L++ ++ + + A + + +
Sbjct: 115 GETVGWRRYSAIAVGFLGVLMIIRPGFDGFNFASLWALTAVFALALRDLATRRAPPSVTS 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG--LLNSFVFCIFSYGIKRAKLS 257
M + + G + + + +S
Sbjct: 175 MQISTYAFATIALSGLGLLLMGGEPLLPAGFPLWPLGGALVAGCTGYYAVVAANRVGDVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ Y+ L+ + + + D + I++ + + +L +++
Sbjct: 235 FISPFRYSRLLVALAIGIIAFGERPDAWTLLGSAIIIGSGLYTILREQRLKRRSR 289
>gi|332638386|ref|ZP_08417249.1| hypothetical protein WcibK1_06791 [Weissella cibaria KACC 11862]
Length = 286
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 92/284 (32%), Gaps = 12/284 (4%)
Query: 29 FVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ WGI + + L + VS + + R+ S + + + K
Sbjct: 1 MAAGGALFWGINGILSNILFERINVSPDWLTTVRLFISGIVLLIYSLLRRQN--IFKIWR 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A +L FS + F+ L + + ++ P + V ++F +
Sbjct: 59 SPKNAGILLAFSLIGIYFAQSNFVRTLYYGNAAVATVLQYMAPALIVIFLAIFRQTWPRR 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC---- 201
++IA +L ++ ++++ + + L + A + G ++
Sbjct: 119 QEVIAVVLSLVGIVLLVTNGNLTRLEINDKTLLFGILSAIGLVAYTLIPGRLLQQYDAIL 178
Query: 202 ---VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + I TL + F + +++ T
Sbjct: 179 VVGWGMFIGGLAANFYAPLYHPAYHFDAIDLTLLFFIVVFGSIVAFVWYIASLRKVAPET 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
VG++ PL V S +L + + + ++A+V+ +
Sbjct: 239 VGMLGMLEPLSATVLSALLLGVQFQAFQVVGIVLTLVAIVIMNV 282
>gi|327189672|gb|EGE56820.1| putative permease protein [Rhizobium etli CNPAF512]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 78/279 (27%), Gaps = 11/279 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +++ A + G T + ++ + + + R + P + L
Sbjct: 2 SKQVQGYVYLTLAMLTVGSTVIASKLIAAGLPPFTATALRFALAFPVFLLLMRVTGVRLP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + +++ + + I L PV+S + + L
Sbjct: 62 KLP----WRDRLILVIQAGAGSVGYTTLLISGLSLTSAADAGVIIGTLPVVSAAISILLL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
ER ++A L +L + S + + + +AV
Sbjct: 118 GERPQPALLLAVALATAGVLSIAFAPDAAGGSLVGNMLILLAVVCEGLFILLNKRLTVDI 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ I V+ F + + F ++ G +R
Sbjct: 178 PPLAQSTLMTGIGFAVAVIPAVFEAPSVQGFSASAAAAVVYYALVPTVAGFLLWYAGAER 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ + AP+ ++ + L +P+ +
Sbjct: 238 VSGTEASLFTALAPVSAVLLAFVTLGEPVGFGQLAGIAC 276
>gi|325124535|gb|ADY84058.1| hypothetical protein BDGL_003472 [Acinetobacter calcoaceticus
PHEA-2]
Length = 308
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 89/300 (29%), Gaps = 22/300 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLE----VISHRVLWSLPGVFFAIVYFSGGLSL 80
+G+ F C+ L+ ++ + +S L +++ R+L +LP +
Sbjct: 10 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDGTVLMALRMLSALPFFLLICWFNRHH--- 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+K + ++ L+ L F+ P ++V + S+ K
Sbjct: 67 -NQGIKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIVSSLLYK 125
Query: 141 ERLNHLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARK 186
++L+ A L ++ L + S +
Sbjct: 126 QKLDVKSFFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSFVFASAVAFAGYLLLTPPLI 185
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ Y + L + + L+ +
Sbjct: 186 KKFGSWNFTGLALTVACIGTLTHYALSTPHPIQLLLQLPSSVIWYGIGLGFLVTVLPTVM 245
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + + + ++ +++ L
Sbjct: 246 LMQSIERLGASQSAMIASIGPVLTILLAVAFLNEHLNMWQWVGCLLNIVGVMMITLKKKR 305
>gi|260777477|ref|ZP_05886371.1| permease [Vibrio coralliilyticus ATCC BAA-450]
gi|260607143|gb|EEX33417.1| permease [Vibrio coralliilyticus ATCC BAA-450]
Length = 313
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 92/299 (30%), Gaps = 10/299 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S+ + +G L + A +LWG T + +S L + + + +
Sbjct: 1 MSQTLKTHNEHLGVLVILFASLLWGTTGTAATYAPDISPLAIGAFSMGVGGLLLALFACN 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + K G L + LA + + + + + F +
Sbjct: 61 TIRKDRRILKSNKAILLTGALALAVYPLAFYSSMRMAGVAIGTVVSIASAPFFVAFLECL 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCF 183
G + + +I IL L + + +A A
Sbjct: 121 FGKEKTIDTRWVISLIVGATGILLLTLSETSTSTQADIQHMKFIGIALGLLAGFTYATYA 180
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + M + ++ + F G + F I ++ L +
Sbjct: 181 WAAKMLITEGIHSKSAMGSIFGLGSLLLLPSLFFTGGNLFATPINTSVALYMAFVPMFLG 240
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ F YG+K S ++ P + V +V ++ + I G++++ +++
Sbjct: 241 YVCFGYGLKTVSASKASLLTLFEPAVAAVFAVVVVGEHIGVSGWGGIGLIMVCLLLQSY 299
>gi|261378406|ref|ZP_05982979.1| integral membrane protein [Neisseria cinerea ATCC 14685]
gi|269145178|gb|EEZ71596.1| integral membrane protein [Neisseria cinerea ATCC 14685]
Length = 291
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/283 (9%), Positives = 77/283 (27%), Gaps = 3/283 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+W + + ++ + ++ R+L + V G + +
Sbjct: 1 MFYQILALIIWSSSFIAAKYAYATIDPALMVGVRLLIAALLVLPVCRRHIGKIPRREWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ VF+ + + + A + L +
Sbjct: 61 LLAVSFITYVFTLMLQFIGLKYTSAASASTIVGLEPLLMVFIGHFFFNDKARAYHWICGA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L++ G L + + + + + F + +
Sbjct: 121 AAFAGIALLMAGGAEEGGEVGWFGCFLVLLAGIGFCTAVRPTQRLIARIGAPAFTSVSIA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + L + + + +++ G + G++
Sbjct: 181 AASLMCLPFSLALAQSYTVHWSWQGVVSLLYLGVGCSWYAYWLWNKGTGSVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P++ ++ +V IL + + V + +V+ A +
Sbjct: 241 SLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATFAAGWLSHR 283
>gi|242279880|ref|YP_002992009.1| hypothetical protein Desal_2414 [Desulfovibrio salexigens DSM 2638]
gi|242122774|gb|ACS80470.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
salexigens DSM 2638]
Length = 295
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 90/294 (30%), Gaps = 10/294 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ A ++W + L + L+++ + V++S +F + +
Sbjct: 2 QQHDQKKAYIYGLSAVLIWSTVASAFKIALGYMDPLQLLFYAVIFSTLSLFLILKIQNKT 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + K+ G+ +++ A + + L
Sbjct: 62 EQIKRMSTKDLLKNGLP--GLLNPFLYYIVLFKAYDLLPAQEAQPLNYTWAITLSLLSIP 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVG 191
L +++ +++A L + ++I++ H + +A+ + +
Sbjct: 120 LLGQKMTMRELLAILTSYMGVVIISTHGNLLNIQFSNGFGVFLALFSTILWSLYWIMNTK 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + + + L V F ++ +
Sbjct: 180 SKSDPLVGLFLNFCFGLPLVAVAMLIFSGPPPFNAPAILSAAYVGFFEMGITFALWLNAM 239
Query: 252 KRAK-LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
K + S V + + +P L ++ FIL + I + +V ++ L
Sbjct: 240 KLTEKASRVSNLIFLSPFLSLILIHFILGEEILHSTLVGLLFIVGGNLIQQLGR 293
>gi|223938208|ref|ZP_03630104.1| protein of unknown function DUF6 transmembrane [bacterium Ellin514]
gi|223893080|gb|EEF59545.1| protein of unknown function DUF6 transmembrane [bacterium Ellin514]
Length = 354
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/287 (11%), Positives = 79/287 (27%), Gaps = 5/287 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N + G + A L+G + +++ FL Q+S + L S G+ +
Sbjct: 2 NKNAHKWSGVIAALLAAFLFGASTPFSKAFLPQMSPQLMAGLLYLSSGVGLGVYWILRGR 61
Query: 77 GLSLLKDTLKN-PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
K+ + + + + L S + V + L
Sbjct: 62 SNRTDKEARLTGKDVPWLAGAFLSGGVIGPVLLLIGLRETPASSASLLLNLEGVFTALLA 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGS 192
KE + LI +++ + + + +
Sbjct: 122 WFVFKENFDSRIAAGMALIAGGGVVLAWNGQRIEGFPWGSLAIIGACLAWAIDNNLTRKA 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S +++ +L V G + +F G++
Sbjct: 182 SASDPVQIAMLKGLVAGTVNTTLGLLLGSKLPGLSTLLATSLIGLFGYGISLTLFIRGLR 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G TAP + + S+ + + PI + ++ + +
Sbjct: 242 HIGAARTGAYFSTAPFIGAIISLLLFRDPITATLLLAGCLMAAGVWL 288
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 9/132 (6%), Positives = 31/132 (23%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
+ + G + + + + + L
Sbjct: 22 GASTPFSKAFLPQMSPQLMAGLLYLSSGVGLGVYWILRGRSNRTDKEARLTGKDVPWLAG 81
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
+ + G++ S+ ++ + + + F+ K+ D+ ++
Sbjct: 82 AFLSGGVIGPVLLLIGLRETPASSASLLLNLEGVFTALLAWFVFKENFDSRIAAGMALIA 141
Query: 295 IAMVVYLLPTVI 306
VV
Sbjct: 142 GGGVVLAWNGQR 153
>gi|124003990|ref|ZP_01688837.1| putative permease [Microscilla marina ATCC 23134]
gi|123990569|gb|EAY30049.1| putative permease [Microscilla marina ATCC 23134]
Length = 288
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/278 (11%), Positives = 82/278 (29%), Gaps = 2/278 (0%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A + + + + + + R + + + + +F K +
Sbjct: 12 IALVFLSTSGVLGKLVTTTPAYTI-FWRCVIAALALAGYV-HFQKLWQKPKAKETRFWLI 69
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
F ++ + + + L ++ T + +F F L +IA
Sbjct: 70 SGAFFGLHMIFYFYAIGVSTVAIAFISLFTYPIITTLIEPLFFKQKFDWFNLISAVLIAV 129
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
++I++ ++ + L + + + +L + V
Sbjct: 130 GIVIMTPEFSLKNNTTLGVLLGVIAAAMLALRNLMSKRYMQERNVSGSVVMLYQLIVSVV 189
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
V G + + + +F I+ K ST I+ P+ I
Sbjct: 190 VLLPALAGNYGQNSWQNMGYIALLGVATTAVGHTVFISKIRYFKASTQSIIAGVQPIYGI 249
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
V +V ++ + + I I++ + + L V
Sbjct: 250 VWAVLLIGEKLPLRTVIGGSIIIFTVCLESLKQVRKGR 287
>gi|332994648|gb|AEF04703.1| membrane protein [Alteromonas sp. SN2]
Length = 294
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 105/290 (36%), Gaps = 9/290 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +L G T L++ + +S ++ R +++ +F + + S L+L
Sbjct: 8 LISLHFTVVLLGGTALFSHLV-PLSASDITLMRSVFACIALFLFLRFSSESLTL-----A 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K + + ++A+HW + A+ + + F PVI+V + F K L
Sbjct: 62 SRKDYLIAIGLGILMALHWVTYFAAMQYSSVSVGMIALFTFPVITVLIEPFFEKVSLVWQ 121
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I++AL +I + + + + I V + R I + + +
Sbjct: 122 DIVSALTVIAGVYFIVPETSLDNDITLGVLIGVGSAVLYAFRNLIHRKHFKQYSGAKAMA 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + E + L+ + + + + ++ + T ++
Sbjct: 182 WQTLVIAIFLLPTGSNEITDAPMSAWLMLLLLGTVFTALPHALIAASLRHLRAKTFSLIA 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P ++ +V +L + + ++ A + L T GK++
Sbjct: 242 CMQPFYGVILAVLLLDENPSGNTLLGGILITSASIYETLNTHKLHGKSEK 291
>gi|330814334|ref|YP_004358573.1| hypothetical protein SAR11G3_01359 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487429|gb|AEA81834.1| hypothetical protein SAR11G3_01359 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 94/293 (32%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
L + G +F+ + + + +++ + ++ + + GVF +
Sbjct: 2 LKQFKKQSLETQGIIFMILSQFFFAANDGFVKYVLLIHNNDISFLGQIVFIRGVFATLFI 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ LK L+ I AV FF L + + P++
Sbjct: 62 GLILFVKKQLELKRMLTSKHLLTRGLIEAVCGIFFFLGLASLPFADLYVLLNLAPILITA 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G++ LKE + + A +L + +L++ + +A + +
Sbjct: 122 SGAILLKEVVGWRRWSAVILGFVGVLVVVNPGELEFGYAFAFPLIAAILITYRDTYTRTF 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ F + + + + G H + + + ++ +L S + +K
Sbjct: 182 QDKFDSIQIAFVTCFVVCICYGIYMLFHLKPILLNELILILISAILLSCAYICSVATVKI 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
A +S+ YT + ++ ++ IV+ + + +
Sbjct: 242 ASISSTSTFRYTVIIWGLLFGYLFFQEIPSYHMIAGASIVIASGLFIIYRQKK 294
>gi|319646491|ref|ZP_08000720.1| YoaV protein [Bacillus sp. BT1B_CT2]
gi|317391079|gb|EFV71877.1| YoaV protein [Bacillus sp. BT1B_CT2]
Length = 290
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 90/286 (31%), Gaps = 15/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + ++WG T + + + + + + R+ +F ++ S+ K+ +
Sbjct: 5 LLGIISVTLIWGYTWVTMKIAITDIPPVLFSALRLFIGAVPLFVILLIKGRKRSIGKENI 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +L+ + + +G + P+ + L E++N
Sbjct: 65 KHYLVMSLLMGLGYMGVLTYGMQFVDSGKTSV-----LVYTMPIFVTVISHFKLNEKINV 119
Query: 146 LQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+++ ++ LL + L L A++W K +
Sbjct: 120 YKMLGLFSGLIGLLFILGGGILHVDQNVIFGELCVLIAALSWGVANVYSKLKFKNTDMIH 179
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+L + + N L + F I+ + + + +
Sbjct: 180 MNAWQLLTGAVMLLIFSFILEPSRPIHWSNEAILSLLFNGLFSTALTFVIWFWILNQIEA 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
S + P+L ++ L +P+ I ++ I + +
Sbjct: 240 SKASMALMFVPVLGLLFGWLQLHEPVTFSILIGAFMICIGIFMNTY 285
>gi|254294588|ref|YP_003060611.1| hypothetical protein Hbal_2234 [Hirschia baltica ATCC 49814]
gi|254043119|gb|ACT59914.1| protein of unknown function DUF6 transmembrane [Hirschia baltica
ATCC 49814]
Length = 320
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 80/295 (27%), Gaps = 13/295 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++G L+ L + ++ SV ++ R+ +SLP
Sbjct: 6 SNQLVGFALAAIGATLFSTKALVIKLAFIQGASVELMMVLRMGFSLPIFITVGFLAWRKQ 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + V +L L F+ P + +F
Sbjct: 66 KHKGIALTPIRIFQTCALGILSYYVCTWLDFESLHYISAQLERLILFLYPTFTALFAWIF 125
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA-----------VTWSAYCFARKT 187
LK++L I A + + I+ + A+
Sbjct: 126 LKDKLTIRHITALAFSYVGVAILIGPEHQQFGNSALWGASLVLLAAILFAAYVTLSKATI 185
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+GS I M AI + + + G E + + +
Sbjct: 186 TAIGSPLFTSIAMSAAAIAIMIHFICEASLGVEQIEISTEIFCYGIFLAIFCTAIPAFAM 245
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
S I R + P + + +V+IL +P I + ++ ++
Sbjct: 246 SEAISRIGPGLASALGGLGPAVTAILAVWILNEPFGWPHFIALVFAISGAMILVM 300
>gi|253572626|ref|ZP_04850027.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251837758|gb|EES65848.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 295
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 94/294 (31%), Gaps = 5/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + + +G+ P ++ L S EV+S+R + + ++
Sbjct: 1 MNRIKGIFYAAVSSSTFGLAPFFSITLLLVGFSAFEVLSYRWGIASVVLVIFGLFSGCDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + L + +L + + I + + ++ VF
Sbjct: 61 RLKRKDLAVVFTLSLLRAITSFSLIIAYQNIASGVASTIHFMYPLAVALVMMFVFREKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEG 195
+ + L ++ ++ + P+ +A +++ Y +
Sbjct: 121 VWVIVAVLMSLSGASVLSLGGVDVKDGNTPMGLVAACVSVFSYAGYIIGVRKTRAVKINS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V+++ ALFY++ + G + L + IK A
Sbjct: 181 TVLTCYVMSLGALFYIIGACCTSGLRIVTDGYVWLIILGLALPATAISNITLVQAIKNAG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL +V VF+ + I +++IA+ + +
Sbjct: 241 PTLTSILGAMEPLTAVVIGVFVFNELFTLNTLIGILLILIAVSMVVFREHRMKR 294
>gi|189468092|ref|ZP_03016877.1| hypothetical protein BACINT_04486 [Bacteroides intestinalis DSM
17393]
gi|189436356|gb|EDV05341.1| hypothetical protein BACINT_04486 [Bacteroides intestinalis DSM
17393]
Length = 303
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 98/299 (32%), Gaps = 18/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G +F A ILWG+ + L + S L V + R++ + + +
Sbjct: 2 NKNVQGHIFALTANILWGLMAPIGKSALMEFSALSVTTFRMVGAAACFWLLSAFCKY--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + S L + G +I+ L S P++++ + +++L
Sbjct: 59 ---EHVDHRDMLKIFFASLFALVFNQGVYIFGLSMTSPIDASIVTTTLPIVTMIIAAIYL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTI 188
KE + +L+++ + + L + L S G L +A +
Sbjct: 116 KEPITNLKVLGIFVGAMGALTLILSSQTAGSGNGSIIGDLLCLVAQISFSIYLTVFKGLS 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S M + A + +G + + + +
Sbjct: 176 QKYSPITLNKWMFIYASMCYIPFSYQDVAGIQWTEVSTAAYVQIGYVVIGGSFLAYIFIM 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + V + Y P++ ++++ + + I +V + + +
Sbjct: 236 TAQRLLRPTVVSMYNYMQPIVASIAAIIMGLGVFGWEKGIAVALVFLGVYIVTKSKSKA 294
>gi|152979974|ref|YP_001353269.1| transporter of the DMT superfamily [Janthinobacterium sp.
Marseille]
gi|151280051|gb|ABR88461.1| transporter of the DMT superfamily [Janthinobacterium sp.
Marseille]
Length = 318
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 86/287 (29%), Gaps = 18/287 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L+ A + + ++ + V L +++ R+ +LP + + +
Sbjct: 15 GRLYAILAAAGFSLKAIFVKLGYAAGPVDALTLLTLRMGLALPLFAWLVWLSRDPQAERL 74
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + + F Y L L ++ P + + ++ + R
Sbjct: 75 TVMDGLRICLLGMVG---YYLSSLFDFYGLEYISAGLERLILYLYPTMVLVFQAIASRRR 131
Query: 143 LNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPV 190
+ + A + L L I +H G + + Y +
Sbjct: 132 PSSRVVQAMAICYLGLGIAFIHDVGMTEHSAQVIKGAAWVFASAVTYAFYYLGTGAMVHR 191
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S + + + + L + + + +
Sbjct: 192 LGSMRLAGLAGSASSIFVIMHFAFSGNVSDLPALPSAVWLNAGLMAVVSTVLPVYWLALA 251
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++R + + P+L +++S +L +PI + +V+ +
Sbjct: 252 VQRMGATQAAAVGSLGPVLTVLASWVLLSEPISAFQLGGLALVMFGV 298
>gi|146283557|ref|YP_001173710.1| hypothetical protein PST_3233 [Pseudomonas stutzeri A1501]
gi|145571762|gb|ABP80868.1| membrane protein, putative [Pseudomonas stutzeri A1501]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/292 (8%), Positives = 70/292 (23%), Gaps = 19/292 (6%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + W L + + L + R + + + +
Sbjct: 12 LLIAVLCWSGNALVARAFYDQIPPLSLSFWRWVLATCLLLPFVA----KGIWTHRAALQA 67
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ V +A +A + A + + + P+ + L E
Sbjct: 68 AGWRLPVIAALGIASYNSLLYTAAQSTEAINLTLVNTCLPLATFIGAGFLLGEWPLRRAW 127
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA- 207
+ LL + + + + + L +P
Sbjct: 128 FGMAVAAAGLLYLISRGSWQTFASLLFKAGDLIMLLAVLVWALYTLLLRRWSSFLTVPPL 187
Query: 208 -------------LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ S F + + +++G+K
Sbjct: 188 VLLGVLMLLGVPLILPFYLYELSRVGGFAATPANLGAIGYTAVFASLIAYLAWNHGVKVV 247
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + Y P+ + +L + + I ++ +++ P+
Sbjct: 248 GAAKAAMASYLMPVFTALLGWLLLGEALQPFHWIGGALIFAGLLLATRPSFR 299
>gi|19704009|ref|NP_603571.1| transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19714197|gb|AAL94870.1| Transporter [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 282
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 89/280 (31%), Gaps = 13/280 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+++F A I +G+T + T+ L+ + +IS R L + + K
Sbjct: 9 IYMFIATIFFGMTYVLTKICLKYSTEFHIISFRFLIAFVVSLIFL--------QKKIFPV 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +L + + + SF ++ + F F KE+
Sbjct: 61 KRTEFLYSLLLGALLFLVFIAMTIGVKYTTATNASFLISLSVIFIPFFSWFFNKEKPKKR 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----GFFIEMCV 202
+ ++ ++ ++++TL + I A F I + +
Sbjct: 121 IFVVLIIALIGIILLTLDKNLEFHIGDILCLICATLFTFYVIMTEKIVKNNNPTALGVLQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
LF + ++ +F + + K + VG +
Sbjct: 181 FGWVFLFSFLVQYPIESFVIPKNKFFWLSMVLLGIFCTAFGYIAQTIAQKNLSSTVVGFI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+ + F L + + + I +++I+++ +
Sbjct: 241 LSLEPVFSGIFGYFFLNEYLSFQQYIGAFLLLISVIYVSV 280
>gi|324111555|gb|EGC05536.1| carboxylate/Amino Acid/Amine transporter [Escherichia fergusonii
B253]
Length = 318
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 103/312 (33%), Gaps = 12/312 (3%)
Query: 9 EYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLP 65
+ L+ E + G L V A +LWG + + Q++ Q+S + R++++
Sbjct: 8 DEKTKLNAEENMSSSRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGF 67
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ + A+ +L+FS F+ + + F
Sbjct: 68 ILLTLSFVHGD--KVFSVLQNRHDALRLLIFSIVGALTVQLTFLLTIEKSNAATATVLQF 125
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTW 178
++P I V ++ K R L + A ++ ++ H L IA +
Sbjct: 126 LSPTIIVAWFAIARKARPGILVLTAIFTSLIGTFLLVTHGDPTSLSISPAALFWGIASAF 185
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+A + + + G + + ++ G HF + F +
Sbjct: 186 AAAFYTTYPSTLIARYGTLPIVGWSMLLGGLILLPFYAGQGTHFMVNGSLILAFFYLVVI 245
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ F ++ G + I+ PL S+ +L + +++ +++
Sbjct: 246 GTAVTFSLYLKGAQLIGGPKASILSCAEPLSSAFLSLLLLGITFTVPDWLGTLLILSSVI 305
Query: 299 VYLLPTVINSGK 310
+ + + K
Sbjct: 306 LISMDSRRRIRK 317
>gi|325971849|ref|YP_004248040.1| hypothetical protein SpiBuddy_2024 [Spirochaeta sp. Buddy]
gi|324027087|gb|ADY13846.1| protein of unknown function DUF6 transmembrane [Spirochaeta sp.
Buddy]
Length = 302
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 94/299 (31%), Gaps = 20/299 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++G + V ++W T + ++ L + +++ R L +
Sbjct: 9 KKTRVLGHVAVLLTMVVWATTYVSSKKLLTSFTPSQILVIRSTLGLLVLSAI-------N 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + + +++ ALL P ++ +F
Sbjct: 62 TKPLVYKQRLDRLLVALAGFCGIFLYYFLENTALLFTSASNVGVIVAAAPFFTLLASHLF 121
Query: 139 -LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----------AIAVTWSAYCFARK 186
+E L + L + ++++T S + + ++
Sbjct: 122 LKEEALRKNYFVGLALSMGGIILLTFSSTEEVAFNPKGDLLALLAIMVWALYTVLTRIIG 181
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ I ++ +G + + FL + ++F F
Sbjct: 182 RKGYPNLLVTRNMFFYGLIGHTLVLLLSGETLPVKEIIQTPYIYHFLFLGVVASAFCFLS 241
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++G++ Y +P++ I+ +V L +P + I + + +++ +
Sbjct: 242 WNFGLRTIGPIKSSFYLYLSPIITIIVAVSFLSEPFGELDAIGTALTLSGLLISEYRSR 300
>gi|228929539|ref|ZP_04092558.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228830118|gb|EEM75736.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 95/293 (32%), Gaps = 12/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + L + K+ +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKDLYIEKNEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KSVLLI-----GIIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G F
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFFITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ +++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLVWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQK 292
>gi|218509191|ref|ZP_03507069.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
Length = 302
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 93/278 (33%), Gaps = 8/278 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G + + +L+ + ++L +V +V+ R L + + I G ++L +
Sbjct: 15 MTGVVLMLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMI-ARQGPMALFR 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
K + + + + + + A+ Y P+ L FL E+
Sbjct: 74 VEQKGLQFMRVAMATGDVALF-----YAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEK 128
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + +A L+ ++I S L ++ ++ FA + V
Sbjct: 129 IGWRRWLAVLVGFAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLRSTSDTTLV 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
G S G I + L+ ++ + + + +K A S + +
Sbjct: 189 TWQTVAALATGIGLSIGHWQPATPIDWSGMLLLG-VVATCAHLLITRSLKLAPASLLAPL 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+YT L IV D I I+V A +
Sbjct: 248 QYTLLLWAIVLGYIFFNDIPDMQIVIGAAIIVFAGLFI 285
>gi|319900579|ref|YP_004160307.1| hypothetical protein Bache_0698 [Bacteroides helcogenes P 36-108]
gi|319415610|gb|ADV42721.1| protein of unknown function DUF6 transmembrane [Bacteroides
helcogenes P 36-108]
Length = 300
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 96/299 (32%), Gaps = 20/299 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
+++ + + + +WG+T + T+ L +S E+ R L + G++F
Sbjct: 5 VTQNKNGMKNHIWHIIAVLTVGIWGLTFISTKVLIESGLSPQEIFLIRFLVAYVGIWFI- 63
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+L T + ++ A+ SF P+++
Sbjct: 64 ------SPHKFFADNWKDEFWLLAGGITGGSFYFLTENTAIGITLVSNVSFIVCTAPLLT 117
Query: 132 VFLG-SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSA 180
L ++ KE+ + +L+ +L + ++ + L + + +
Sbjct: 118 TILALMIYKKEKATRWLVAGSLIALLGVALVVYNGNFVLRISPLGDLLSLSAALMWAFYS 177
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ T + + L + V + + L L L +
Sbjct: 178 LIIKKITDRYSTVFITRKVFFYGVLTILPFFVIHPWQFDVERLLRPAILFNLLFLGVLAS 237
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F +++ +KR Y P+ + SV +L + + V +++ + +
Sbjct: 238 LICFVVWNMVLKRLGTIKASNYIYLNPVFTLAGSVLLLGEHLTPVALSGAVLILGGVYL 296
>gi|294500044|ref|YP_003563744.1| integral membrane protein [Bacillus megaterium QM B1551]
gi|294349981|gb|ADE70310.1| integral membrane protein (DUF6) [Bacillus megaterium QM B1551]
Length = 306
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 92/289 (31%), Gaps = 9/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G FV I WG+ Q L ++SV ++S R+L + + S
Sbjct: 5 SRKKGFFFVTTGAICWGMGGTVAQKLFQEFEISVDWLVSVRLLIAGFLLLMISCIKSNCS 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+L A ++VF+ + ++ ++ + + +++PV+ + +
Sbjct: 65 HILGVWKNRKSAFQLVVFAIVGMLAVQYTYMASIKHGNAAVATLLQYLSPVMIIIYLLLR 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ +I LL + + + I LS+ ++ I
Sbjct: 125 KQSIFTRQDVITVLLALGGCFFLLTNGSISQLSVPVSAVVWGVLSGVAAAFYTLYAVPLI 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFL------GNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + +V G I L F + ++
Sbjct: 185 KKYSSLVIVGWSMVIGGSVMSFIHPPWEASSLSPITCGYILFVIIFGTMLAFWFYVESLQ 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ PL ++++V LK+P + I ++ +++
Sbjct: 245 SLLPKETSLLGSLEPLAAVITTVVWLKEPFGFYQWIGTACIIGLVLLLT 293
>gi|269104910|ref|ZP_06157606.1| protein of unknown function DUF6 transmembrane [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161550|gb|EEZ40047.1| protein of unknown function DUF6 transmembrane [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 318
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/312 (12%), Positives = 91/312 (29%), Gaps = 20/312 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+ +G LWG + L + + + R + ++
Sbjct: 1 MSKTAPNKSLGLTLALICAALWGASFPLGGVLAGKLDPVVLAIARYAIATLCFVAVFIFS 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
LK A+ ++ + AV + F I A + P +++
Sbjct: 61 KKH--TLKKIQSKKDAILLMAAGISAQAVFFYFTILAYEYTSSGEIGVINGMAPFLTMAA 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK-------- 186
V K + + ++ A +L ++ ++ + L + ++
Sbjct: 119 VFVIDKIKPSAPKVFAVVLSLVGAAVIAYDPSNKIQGLNLGHLFALCGVLGFVTYNYILG 178
Query: 187 --------TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ SS + +A+ L V FS L L
Sbjct: 179 KFGSDLNSRYDLYSSSFYQFASATVALFILAIVTGADFSSAAVLVENGKNLGSILALGLL 238
Query: 239 LNSFVFCIFSYG-IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ F + ++ +K + PL ++ + F+L + + + VVIA+
Sbjct: 239 CSGFAYALWELATLKTQDAVITTMALNVLPLFAMIVAYFLLGEVMTLQKLAGVVTVVIAL 298
Query: 298 VVYLLPTVINSG 309
+Y +
Sbjct: 299 CIYTVGDKFKKK 310
>gi|227890883|ref|ZP_04008688.1| DMT superfamily drug/metabolite transporter [Lactobacillus
salivarius ATCC 11741]
gi|227867292|gb|EEJ74713.1| DMT superfamily drug/metabolite transporter [Lactobacillus
salivarius ATCC 11741]
Length = 308
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 97/295 (32%), Gaps = 12/295 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS----VLEVISHRVLWSLPGVFFAIVY 73
+ T+ + + WGI+ ++ +F+ + + V R++ S + F
Sbjct: 9 SMENKKKFWTIMIIISCTFWGISGIFAKFIFNLDRSNTPIFVSQIRMIISGLVILFFSWL 68
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ T K+ + M I + A+ + + F+ P +F
Sbjct: 69 NKDKPMEIWKTKKSSFTIIMFGLLGLIPV--QYCYFEAIKYGDASIATILQFIGPFFILF 126
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++ ++ +++I ++ + + I+ H I L++ V + A
Sbjct: 127 YLTIVKRQAPRRIEVICTIIAFIGVFILATHGNINHLAITPQVLFWGLLSAIGVATNTLI 186
Query: 194 EGFFI------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I + + ++ L L + F +F
Sbjct: 187 PKSLIHEFSPTAVTGWGLLIAGVGLFIIHPHVSASILAPQAIVPLLCVLVIGTIIPFQLF 246
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ ++ K +T +++ P+ + S+ + I ++++A+++
Sbjct: 247 TSALRYVKATTASMLDAFEPISATIGSILVFNMHFYLADMIGSVLIILAVILLNW 301
>gi|121606126|ref|YP_983455.1| hypothetical protein Pnap_3236 [Polaromonas naphthalenivorans CJ2]
gi|120595095|gb|ABM38534.1| protein of unknown function DUF6, transmembrane [Polaromonas
naphthalenivorans CJ2]
Length = 325
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 90/291 (30%), Gaps = 15/291 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L C I + + + V + +I +R+L++LP + S G + L
Sbjct: 39 GLLLASCGAIAFSGKAIIVKLAYRHGVDAVTLIMYRMLFALPIFALMAWWASRGKAPL-- 96
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+G+L T + L L ++ P + + LG V + R+
Sbjct: 97 --ARKDWLGVLWLGFTGYYLASFLDFAGLAHISASLERLILYLNPTLVLLLGLVLYQRRI 154
Query: 144 NHLQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
I+ + + ++ H + LL AV+++ Y +
Sbjct: 155 AMPHIVGMAISYSGVTLVFGHEITLQGRHAAWGALLVFGSAVSYALYLVYSGEMVRRLGS 214
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + + L ++ L + + I+R
Sbjct: 215 MRLVGLATTVACLCCLLQFALLRPLSAAAVAPEVIWLSVLNATLCTAVPVLMVMMAIERI 274
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
S PL I+ V IL +P +V+ + V+
Sbjct: 275 GASLTAQTGMIGPLSTILMGVVILGEPFTAWVAAGTVLVIAGIFVFTRSAR 325
>gi|258622259|ref|ZP_05717285.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585583|gb|EEW10306.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 297
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/275 (10%), Positives = 79/275 (28%), Gaps = 1/275 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ + LS+ +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVAFAAFSLLLVAQLLKKSLSIRQYWRHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + + L + +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFFWHGTPLTRQALAGLLLGVTGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ + + L + A+ +Y A F A +V
Sbjct: 133 AVIVGWDVAAIGPEASLPIICAALAAGSYGLATNYTKQAPQVSAFENAHGSMWAACIWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
++ + + + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMLFVPLRQSPSSMEWSAVIALGVICTGLAYLIYFRLVKEIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+IL +P+ I +V+ ++ ++
Sbjct: 253 WGYWILDEPVGLNTLIGTVLVLAGTMLVTGFSLRR 287
>gi|253700886|ref|YP_003022075.1| hypothetical protein GM21_2268 [Geobacter sp. M21]
gi|251775736|gb|ACT18317.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M21]
Length = 302
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 89/302 (29%), Gaps = 12/302 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S+ P + L + + + + + L + ++R++++ + ++
Sbjct: 1 MSESATIKPWINPYLAILVGVFAVSFSAILVR-VSTAPPLVIAAYRLIFTFLFLAPFTLW 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ V + S LA H+ + +L + P+ V
Sbjct: 60 GG----ATALRGMTKRQVLLSAASGLFLAFHFVTWFISLKYTSIASSVVLVTTQPLFVVL 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIM------TLHSGIPLLSLAIAVTWSAYCFARKT 187
+F KER+ + + L ++ S LA+ +
Sbjct: 116 GSWIFFKERVPRMALYGGALAFAGSAVIGATDFQLGGSAFIGDMLALFAAVMVSGYLLIG 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCI 246
+ V + + + + +FL + +
Sbjct: 176 RKLRGDVPLTGYTFVTYGSSAVVLTATALAANYPMYPHPAKDWLIFLALALVCTVLGHTV 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F++ ++ + S V + PL I+ + L + + + I+ + ++ T
Sbjct: 236 FNWVLRYVQASVVSVSVLGEPLGAILWAAVFLGENPTPRQALGGAIIFSGLYLFTRVTAK 295
Query: 307 NS 308
Sbjct: 296 AR 297
>gi|228964677|ref|ZP_04125784.1| Transporter, EamA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794927|gb|EEM42426.1| Transporter, EamA [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 308
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 87/300 (29%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKNTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----- 194
K++ ++ + L ++T L I V A FA + G
Sbjct: 120 KQKATIFIVLGIAVATAGLYLLTAADSFQLNIGDILVLGCAIAFAAHILINGFFSKKISP 179
Query: 195 -----GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K + V I+ P+ ++ V + + + I + + M+ P+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVEWPSKTKKR 299
>gi|242310757|ref|ZP_04809912.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523155|gb|EEQ63021.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 301
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/282 (13%), Positives = 85/282 (30%), Gaps = 8/282 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVI-SHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A I WG + + L Q + +++ R ++ I++ L + LK
Sbjct: 9 ILMVIAMIFWGSSWPSGKILIQYTSADIVAFWRFFFAFLASIPLILFLKISLRIDTKALK 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
A+ ++ + G + +T T +I+ + + ++
Sbjct: 69 -ILAIAAVLNGVYSILFFIGLNYGSAGKGGVLVTVLIPIFTYLIAYRIYKKDSQRKMKGN 127
Query: 147 QIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+I+ L I S + + G + A +
Sbjct: 128 EILGLALGICSGICLLNLGSVAELFGKFNTLFLLCALDWAILTLVCQRLRIHPLAINFYI 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ I + + E F ++ + L + I+ GI + +
Sbjct: 188 TLFTIILYLPLFLFHSNMLEVFSYDGRFWSMLFVAAVLSTAIGTSIYYVGISKLGATKAS 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ P + SS IL + + + +IA + L
Sbjct: 248 SFQLLVPATALGSSFVILGEIPSVLTICGGILAIIATYLINL 289
>gi|218551188|ref|YP_002384979.1| hypothetical protein EFER_3953 [Escherichia fergusonii ATCC 35469]
gi|218358729|emb|CAQ91387.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
Length = 318
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 103/312 (33%), Gaps = 12/312 (3%)
Query: 9 EYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLP 65
+ L+ E + G L V A +LWG + + Q++ Q+S + R++++
Sbjct: 8 DEKTKLNAEENMSSSRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGF 67
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ + A+ +L+FS F+ + + F
Sbjct: 68 ILLTLSFVHGD--KVFSVLQNRHDALRLLIFSIVGALTVQLTFLLTIEKSNAATATVLQF 125
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTW 178
++P I V ++ K R L + A ++ ++ H L IA +
Sbjct: 126 LSPTIIVAWFAIARKARPGILVLTAIFTSLIGTFLLVTHGDPTSLSISPAALFWGIASAF 185
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+A + + + G + + ++ G HF + F +
Sbjct: 186 AAAFYTTYPSTLIARYGTLPIVGWSMLLGGLILLPFYARQGTHFMVNGSLILAFFYLVVI 245
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ F ++ G + I+ PL S+ +L + +++ +++
Sbjct: 246 GTAVTFSLYLKGAQLIGGPKASILSCAEPLSSAFLSLLLLGITFTVPDWLGTLLILSSVI 305
Query: 299 VYLLPTVINSGK 310
+ + + K
Sbjct: 306 LISMDSRRRIRK 317
>gi|193076805|gb|ABO11527.2| putative membrane protein [Acinetobacter baumannii ATCC 17978]
Length = 298
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F Q V V+ R L +
Sbjct: 16 KALLCLMTSALLFSIMGVCIRFASQTVDNATVVFFRNAVGLFIFIPMLF-------KQGL 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 69 DFIKTDKLWMHTWRSIVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + +L+ + + A + V + ++
Sbjct: 129 TKSMIFAAVIGLIGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + LI GLL + SY A +G M
Sbjct: 189 FYFCVFGSLISSIPMFWHWRIFTWHELALLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 249 YIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILL 284
>gi|183220230|ref|YP_001838226.1| DMT superfamily permease [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910348|ref|YP_001961903.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775024|gb|ABZ93325.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778652|gb|ABZ96950.1| Putative permease, DMT superfamily; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 304
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 83/299 (27%), Gaps = 23/299 (7%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF+ A ILWG T + + L+ V ++ R + +L +
Sbjct: 9 LFLVIAAILWGGTFVVIKLALDSVPPFLFLAVRFSLAGFITILL-----YRKTLFSKANR 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ F A + + F L+ + F + L ++ +
Sbjct: 64 RWDYIVPAFFVACSALLGYAFQTIGLVYTSATQSGFMTGAYVIFVPLLEIAIERKLPSLR 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS-----------------LAIAVTWSAYCFARKTIP 189
IA +++++ L ++ + AV K IP
Sbjct: 124 TWIAVVIVVIGLFCISQNGKTYDEFVNEFGFSYGDGLTLIGAFFFAVYIILIDIYSKKIP 183
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
F I + + LF V + F I +
Sbjct: 184 TQILVSFEILLIAIVSSFLFPVESIFSKQSISIQFDLKFWIGIIYTSVFATIFTTQIQTR 243
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + G++ P+ + +L + + TV I + + ++ +
Sbjct: 244 YQKAVSPARAGLLYSLEPVFSFFLAYLVLGERLGTVGAIGSLLTLFGILYSEMGKWNKR 302
>gi|126729238|ref|ZP_01745052.1| putative transporter, permease protein [Sagittula stellata E-37]
gi|126710228|gb|EBA09280.1| putative transporter, permease protein [Sagittula stellata E-37]
Length = 306
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 99/299 (33%), Gaps = 16/299 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T +G F+ L + + +V V ++++ R + ++ ++ S
Sbjct: 3 RRNTTLGIFFMLVFCALAPVMDASAKATPPEVPVTQILAFRFGVQVLLLYPLVMALSLPS 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A L + F AL +FV+P I LG+VF
Sbjct: 63 RTTVRDGL------FHLARAATLTLATYCFFTALRFMPVADAIAIFFVSPFIVTLLGAVF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKE + + +A+L+ L++ S L ++A+ +A FA + S
Sbjct: 117 LKEPIGWRRSLASLVGFGGALLVIRPSFADLGAVALLPLATALMFAIYILMTRSMSQRAH 176
Query: 199 EMCVLAIPALFYVVWNGFSG---------GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + A AL V + + LI G + + ++
Sbjct: 177 PLVLQAHTALAASVLTVPPMLLLDGTGLTYVDPVWPSPFAWMTLIAVGTVATISHVFLTF 236
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ TV ++Y + + I + + I++ + + + S
Sbjct: 237 ALRLIPAGTVASLQYFEIIGATIVGFLIFGDLPTPLTFLGIAIIIASGLYNIARESRLS 295
>gi|42783554|ref|NP_980801.1| integral membrane protein [Bacillus cereus ATCC 10987]
gi|42739483|gb|AAS43409.1| Integral membrane protein domain protein [Bacillus cereus ATCC
10987]
Length = 309
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 91/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 8 YVIMLLVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILMGIVF----MKSEWNTSL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGMSLMLSLIGVIVVITSGSMNTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMSGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGTFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + + IV+I + + + + + K
Sbjct: 244 LGASKASMYLNLTPIVATCISVVLYGAAVTWQQIVGMAIVLIGVYIATVQSNKDIKK 300
>gi|317011433|gb|ADU85180.1| putative membrane transport protein [Helicobacter pylori
SouthAfrica7]
Length = 302
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 99/297 (33%), Gaps = 4/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A +++ +LA + +L T F + + + L
Sbjct: 61 LKSYKQGGFKKLAFRVIIGGLAMLAFFYNIEKISLATATAFSQCAPIYTVLLSPLLLKEK 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K L I ++++S + + ++ ++ + + + +
Sbjct: 121 LKKSALISACIGLVGVVLISDPSVENVGPVEIIMGILSGIFVSLAYITLRDLREYYDKQA 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEH---FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + +L + + D L++ G+ + +Y A
Sbjct: 181 VILAFAFGMSLLGLAGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTYAYMNA 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +EYT + ++ +++ + +D ++ +++ + ++ LP ++ KN
Sbjct: 241 PAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILFSGLLIALPALLKELKN 297
>gi|190149357|ref|YP_001967882.1| hypothetical protein APP7_0088 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307262672|ref|ZP_07544301.1| hypothetical protein appser13_1000 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189914488|gb|ACE60740.1| hypothetical protein APP7_0088 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306872000|gb|EFN03715.1| hypothetical protein appser13_1000 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 282
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/277 (10%), Positives = 79/277 (28%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V IL+G + ++ +E S ++ RV+ +L + ++ L L
Sbjct: 3 KHTLALLKVHFTAILFGASGIFGALIES-SPDTLVLGRVMIALVCISLYFIWKKQPLVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ +A + + + SF FV + L
Sbjct: 62 THRELFSQILSGVLLTAHWVTFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+IA + ++ + L L + + + +
Sbjct: 120 YREGFLLIAITIGLMLVTPEFTFGNNATLGLLWGILSALVYGVLAVVNRKTMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSTKGLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTIKMLIGGAIILLSVA 276
>gi|150018836|ref|YP_001311090.1| hypothetical protein Cbei_4024 [Clostridium beijerinckii NCIMB
8052]
gi|149905301|gb|ABR36134.1| protein of unknown function DUF6, transmembrane [Clostridium
beijerinckii NCIMB 8052]
Length = 317
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 100/297 (33%), Gaps = 23/297 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++ ++G++ L+++ L + E++S R L +L + I
Sbjct: 2 KNKSHIIPYFTAIITNFIFGLSFLFSKQALSVATPTELLSFRFLAALLIMTILIFL---- 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++K KN +++ + V++ F Y + L + P++ L
Sbjct: 58 -KVIKVNYKNKPMKWLIILAVIEPIVYFIFETYGIKKTSSSLGGLMIALIPIVVTVLAVY 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-----------------SGIPLLSLAIAVTWSA 180
LKE+ + QI++ +L + ++++ L G + +
Sbjct: 117 LLKEKPSPKQIVSIILSVSGVILIILMENSNDSGGSTLLGIILLGGAVFSAALFNIIARK 176
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
I V + + +V+ S L L +
Sbjct: 177 ISRQFTAIEVTYFMMLIGAIFFNIVSITNHVINANLSEYFIPLRSINFIVSILYLGILSS 236
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + +Y + + + S + + ++ I + V +L + I ++++ +
Sbjct: 237 VVAYFLANYTLSKMEASRSAVFANISTIVSIAAGVLVLHENFQLYHVIGSVMILVGV 293
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 42/99 (42%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ AL + F N P +I + F +YGIK+ S G+M
Sbjct: 44 FLAALLIMTILIFLKVIKVNYKNKPMKWLIILAVIEPIVYFIFETYGIKKTSSSLGGLMI 103
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+++ V +V++LK+ + + + V +++ +L
Sbjct: 104 ALIPIVVTVLAVYLLKEKPSPKQIVSIILSVSGVILIIL 142
>gi|326923748|ref|XP_003208096.1| PREDICTED: transmembrane protein 20-like [Meleagris gallopavo]
Length = 337
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 95/297 (31%), Gaps = 10/297 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + L+ + L+ + +E V +EV + R ++ + V ++Y+ G K
Sbjct: 35 LGLFYTLLSAFLFSVASLFLKKIEDVHSVEVSAFRCIFQMAFVLPGLIYYKTGFLGPKGK 94
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
G+L SA IL + + +S + + + L
Sbjct: 95 RIFLFFRGLLGSSAMILLYYAFQVMPLADATVITFSSPVFTSLLAWIFLKEKYSVWDLLF 154
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSE 194
L I +++I + + + IA T SA VG S
Sbjct: 155 TLFTITGVILIARPPFLFGSNVSGIEGSYSDHLKGTIAAIASTVSAASTIVILRKVGKSV 214
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+F+ + A+ L V F E D +FLI G+L + ++
Sbjct: 215 HYFLSIWYYAVIGLIGCVIALFVMNEWRLPYCGKDRVFLILIGILGLGGQIFLTKALQIE 274
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K V IM + + + L VV + + S K
Sbjct: 275 KAGPVAIMRTMDVVFAFILQILFLNHLPTWWTVGGALCVVASSSGTAIRKWRQSSKK 331
>gi|288905076|ref|YP_003430298.1| hypothetical protein GALLO_0875 [Streptococcus gallolyticus UCN34]
gi|288731802|emb|CBI13367.1| conserved hypothetical integral membrane protein [Streptococcus
gallolyticus UCN34]
Length = 295
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 92/285 (32%), Gaps = 15/285 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ +F A ++ + L + + +RVL+S+P + I
Sbjct: 7 NSIKDICLIFLAICFLATGGIFVK-LSPLPPINTGFYRVLFSIPMLLPFI-------KKS 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K + ++ + LA F+ + + +TP + + KE
Sbjct: 59 DVQALSRKQIMTIILAGAFLAGDLTFWNSSFSYTSVANANLLVNLTPFTVIPVSYFLFKE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSE 194
++ ++ L+ ++ +L++ + + A + A + +
Sbjct: 119 KMTPKFLLGGLVTLVGVLVLMANKVSLSSERLLGDSLSLGASIFYAMFMITVYQLRDTVK 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I L V + G + L + + +Y + +
Sbjct: 179 SNVIMFFSAFGTLLVLAVVIFLTEGFYLPQNIAELLPLLALALVSQILGQGLLAYCLGKV 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S ++ + P++ + + I ++ ++ I I +I + +
Sbjct: 239 NASLSSLITLSQPVVAALYAWVIFQENLNLQSVIAIVITLIGVYL 283
>gi|116330189|ref|YP_799907.1| drug/metabolite transporter family permease [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|116123878|gb|ABJ75149.1| Drug/metabolite transporter (DMT) family permease [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 302
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 77/291 (26%), Gaps = 6/291 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A I WG + + +I R L + + + + G L +
Sbjct: 10 YVLLVIAMISWGFAWPSAKLIVGTQHPNVIIFWRFLATALSLLPVVFWRKGFFRLPNYKV 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+G ++++ G +T+ + T V R
Sbjct: 70 LFQITIGGILYTIYNQFFLLGLKNGLAGAGGVLVTTMNPIFTYVFVHSFQRKLPSAREGI 129
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++ + + L + S I A + ++ S+ +
Sbjct: 130 GLLLGLIGGCILLRLWEFDLNSLFRSGNIFFLLCAVSWTLLSMNSHSTGQTISPLVYSFY 189
Query: 206 PALFYVVWNGFSGGEHFFLG-----NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + F + + +F ++ + +
Sbjct: 190 VFAIGTILDLFLAFPYGVENALSSGPYFWFHIFYLSVIATTFGTTVYFFASTKLGSRVAS 249
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P+ ++ S L + + I V+A+ + + K+
Sbjct: 250 SFIFLVPVTALLGSWIFLDESPNLTTMIGGTFAVLAVFLLNRNQNDENKKS 300
>gi|116329204|ref|YP_798924.1| drug/metabolite transporter family permease [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116121948|gb|ABJ79991.1| Drug/metabolite transporter (DMT) family permease [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
Length = 302
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 77/291 (26%), Gaps = 6/291 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A I WG + + +I R L + + + + G L +
Sbjct: 10 YVLLVIAMISWGFAWPSAKLIVGTQHPNVIIFWRFLATALSLLPVVFWRKGFFRLPNYKV 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+G ++++ G +T+ + T V R
Sbjct: 70 LFQITIGGILYTIYNQFFLLGLKNGLAGAGGVLVTTMNPIFTYVFVHSFQRKLPSAREGI 129
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++ + + L + S I A + ++ S+ +
Sbjct: 130 GLLLGLVGGCILLRLWEFDLNSLFRSGNIFFLLCAVSWTLLSMNSHSTGQTISPLVYSFY 189
Query: 206 PALFYVVWNGFSGGEHFFLG-----NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + F + + +F ++ + +
Sbjct: 190 VFAIGTILDLFLAFPYGVENALSSGPYFWFHIFYLSVIATTFGTTVYFFASTKLGSRVAS 249
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P+ ++ S L + + I V+A+ + + K+
Sbjct: 250 SFIFLVPVTALLGSWIFLDESPNLTTMIGGTFAVLAVFLLNRNQNDENKKS 300
>gi|228917130|ref|ZP_04080688.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228842548|gb|EEM87638.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 93/293 (31%), Gaps = 12/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + L + K +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKDLYIEKSEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KSVLLI-----GIIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G F
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFFITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + L ++ L++ +++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSNITLKYSIESWLLLIVTAILMHGICTLVWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQK 292
>gi|227356156|ref|ZP_03840545.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Proteus mirabilis ATCC 29906]
gi|227163620|gb|EEI48536.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Proteus mirabilis ATCC 29906]
Length = 306
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 95/302 (31%), Gaps = 14/302 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M +F A ++W I + + + + +R + + ++
Sbjct: 1 MKSIIFPLLAVLIWSINAVVNKAATSVIDPAAISFYRWFLAFLLMTPFLLVPVWHHRKTV 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + A + ++ YA + P+++V + L+
Sbjct: 61 KQY----WWKLFILGALGMGLYQSLAYYAAYYVTATFMGILNSLIPLLTVIISIFVLRVV 116
Query: 143 LNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ +L I L+ + H G+ L + + +AY F S
Sbjct: 117 PTVGIALGTILSISGLVWLVSHGDPSQLLSQGLGRGELMMFIASTAYAFYGVLTKRWSIP 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + I ++ F E L L + + ++ G+ +
Sbjct: 177 LPNWQSLYVQIGFGVLLLIPNFLTAESIALTKDNVGLVIFAGVGASILAPYLWILGVMKL 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL-LPTVINSGKNKT 313
+T I PL + +V +L + + + I G++++ + + L +N +
Sbjct: 237 GANTTSIFMNLIPLFTAMIAVAVLGEEMHSYHFIGGGVILLGIFLVQKLRAPLNFRRQSV 296
Query: 314 KK 315
K
Sbjct: 297 TK 298
>gi|229068159|ref|ZP_04201466.1| Transporter, EamA [Bacillus cereus F65185]
gi|229077765|ref|ZP_04210393.1| Transporter, EamA [Bacillus cereus Rock4-2]
gi|228705556|gb|EEL57914.1| Transporter, EamA [Bacillus cereus Rock4-2]
gi|228714973|gb|EEL66841.1| Transporter, EamA [Bacillus cereus F65185]
Length = 316
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/305 (14%), Positives = 101/305 (33%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKLIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + + + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDIGYMTAYQMIFGSTGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQKM 309
Query: 310 KNKTK 314
+ + +
Sbjct: 310 EQEKQ 314
>gi|224823453|ref|ZP_03696562.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
gi|224603908|gb|EEG10082.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
Length = 293
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 72/277 (25%), Gaps = 3/277 (1%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ Y++WG T ++ L + R + + + +++ L +
Sbjct: 11 LAALLSLYLIWGSTYFAIHVAVDSWPPLLMAGVRFVIAGTVLASFLLWRGEALPNWRQLG 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ L + + + T + + L+
Sbjct: 71 SSTLLGVLMPGMGNGLVTVAQKSVSSGVAALMVATVPLFTTLCARLFGQRTRPLEWAGMG 130
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L + L+ + + G LL +A A A M +L
Sbjct: 131 LGLAGIALLNMGSSLSLSPLGGILLL--LACAGWALGSAWSKHLPQPGGLMASAMMMLMG 188
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
V + + + Y + +T Y
Sbjct: 189 GIALLVASVASGERLAAVPTFEGWLALGYLVVFGSLIAYSAYLYLLANVSPATATSYAYV 248
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P++ ++ V L + + ++V +V+
Sbjct: 249 NPVIAVLLGVLFLGEQVGRQELGALVVIVAGVVLIGW 285
>gi|169828804|ref|YP_001698962.1| hypothetical protein Bsph_3332 [Lysinibacillus sphaericus C3-41]
gi|168993292|gb|ACA40832.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 291
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/278 (11%), Positives = 85/278 (30%), Gaps = 9/278 (3%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ L G + + L S L + + R + + + ++
Sbjct: 7 IALLVVTTFLMGSSFAVVKLGLPYSSPLLLAALRFILAGIIMAIIVILLKRQHPTTGKEW 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ A G +L T +S F P++ V ++F K R +
Sbjct: 67 GK-----LLILGGFQTAGVMGCIFLSLRTITASESSILTFTNPLLVVLFATLFTKARYHV 121
Query: 146 LQIIAALLIILSLLIMTLHSGIP---LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q + L ++ ++I LL ++ + A + + +
Sbjct: 122 HQWVGVFLGLIGVMITMGAQVEWKIGLLFGFLSAVFWAIATLLAKEWGALFDTWVLSAYQ 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L + + F + + L + F + Y ++ +
Sbjct: 182 MLFGGLLLFLSSTLLEQPFFMVNQHSLLILLWLSLFSSIIQFAGWYYLLQNSDPGKTSAY 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ AP +++ +L +P+ +++ + +
Sbjct: 242 LFLAPFFGVLTGWLLLDEPLQPSFMGGGLFILVGIYLV 279
>gi|77457700|ref|YP_347205.1| hypothetical protein Pfl01_1473 [Pseudomonas fluorescens Pf0-1]
gi|77381703|gb|ABA73216.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 297
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 95/299 (31%), Gaps = 8/299 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +++G+T ++ + + ++ R +++ + F + G
Sbjct: 1 MTPRTALGALHIGALMFGLTGVFGKLAAATPAV-IVFGRAAFAVLALAFFARFAQQG--- 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L S +LA HW F A+ + + + P +V L + +
Sbjct: 57 -GWQKLQAVDWRRLALSGVLLAGHWVSFFIAVKVAGVAIATLGFASFPAFTVILEGLIFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER+ +I+ L+ + L+++T L A+ SS
Sbjct: 116 ERIRANEIVLVALVSIGLVLVTPAFDLASGATTGLLWAILSGLLFSLLSLTNRASSGRIP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + + + + I + +F + K
Sbjct: 176 AVQAALCQNVVVALCLLPVAAPQLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
T ++ P+ I + + + I ++++A+VV + N K ++
Sbjct: 236 TAAVVFAMEPVYGITVAWLLFDEDPTLRMLIGGALIIVAIVVSSRMSGSNDKKTVAAEA 294
>gi|91762432|ref|ZP_01264397.1| Transporter [Candidatus Pelagibacter ubique HTCC1002]
gi|91718234|gb|EAS84884.1| Transporter [Candidatus Pelagibacter ubique HTCC1002]
Length = 295
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 76/288 (26%), Gaps = 6/288 (2%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+WG T + ++ + + R V F
Sbjct: 7 LFSALLCTFIWGTTFIAQDTGMDDIGPFTFNAVRFFVGFLAVAPLAFIFERKNISKSLQR 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + L + ALL +F + F+ K+ ++
Sbjct: 67 NQKEFTNLALLIGLSLFLGSALQQVALLYTDVANAAFFTIFYVPMVPFIIFFMYKKPIHW 126
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE-----GFFIEM 200
+ LL ++ ++T + + + A ++ I G I
Sbjct: 127 SIWPSVLLCVMGGYLLTNFYSATVRTGDALIIMGALFWSTHIIFTGKIIENYNLPLTIGA 186
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
I + ++ + L L F + Y K +
Sbjct: 187 IQTLIVSSLSLIIGLIFEDFIWSNILKEKFQILYAGILSGGLAFVLQIYAQKNISPAPSA 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ + +++ +L Q +D +++ ++ L +
Sbjct: 247 IIFSLEGVFATIAAWILLDQILDINNLFGCLFILLGVLFSQLAPIFKK 294
>gi|33596800|ref|NP_884443.1| hypothetical protein BPP2188 [Bordetella parapertussis 12822]
gi|33573501|emb|CAE37488.1| putative membrane protein [Bordetella parapertussis]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 94/296 (31%), Gaps = 8/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
PTM ++ A + + T+ L VSV +++ R L + +
Sbjct: 7 QPTMRAACWMSGALVSLLAMAVATRELSAHVSVFQILFFRSACGLLIIVPLVWRAGWRKV 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++Y + F PV + L +V L
Sbjct: 67 ATARPGLHVLRNATH-------FLAQYGWVYGIAFIPMAEVFAIEFTVPVWTALLAAVLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL +++A L + + ++ + A+AV A FA I
Sbjct: 120 GERLTAARLLAVALGLAGVFVIVRPGSGMIHPAALAVLLGAVAFALAYIMTKMLARTETP 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+C+L L + ++ +++ G + + + A + V
Sbjct: 180 LCILFYMTLVQLPLGLAPALANWSSPPPHVWPWILVVGTMGLATHYCLARAMALADATVV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+++ L+ V + I+ + + G+++ + +L + +
Sbjct: 240 VPLDFLRLPLIAVVGAVFYGEAIEPLLFLGAGMILAGNLYSILAERRRPAMPRAAR 295
>gi|291537644|emb|CBL10756.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Roseburia intestinalis M50/1]
Length = 284
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 87/289 (30%), Gaps = 12/289 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++ +M GT++V + + + + + + S + + R ++S + +V
Sbjct: 1 MQEKQLDKESMKGTIYVLLSAVCFSTGGVLIKSI-PWSSITIQGIRSIFSFMLIASYMVI 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ ++F A V F+ A F P+ +
Sbjct: 60 TK----------RKFVWNKTVLFGAVCNTVMALTFVSATKMTTAANAIVLQFTEPIFVIL 109
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L K++ ++A ++ +L L S + + + +
Sbjct: 110 LMWALYKKKPKKAAVVACAVVFAGILCFFLDSLSAGGMAGNLLAVFSGFTYALVMMMKGF 169
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G E +LA + + S ++ + + S G+ R
Sbjct: 170 PGADFESSLLA-SHVISLSIGLPSFLGETDHSAKAWICIILLGVIQFGLSYIFLSRGLDR 228
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
T + P+L + + I I +V+ A Y +
Sbjct: 229 VSPVTASLTSTLEPILNPILVAIFCGETIGRTAVIGAVLVIGAAACYNV 277
>gi|265755999|ref|ZP_06090466.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263234077|gb|EEZ19678.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 308
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 91/304 (29%), Gaps = 20/304 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ G L + A I+WG+ + +S L + + R+ + A ++
Sbjct: 1 MAIQKYKGHLALLGAAIMWGLMSPIGKTALENGISGLSLATFRMTGGAICFWIASIFAPK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +K + + + ++ G F + L S P+ ++ + +
Sbjct: 61 ------EQVKPHDLMMLFFAGLLGIVLNQGCFTFGLSLTSPIDASIVTTTAPIATMIVAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFA 184
++LKE + ++I L + L + L S G L LA
Sbjct: 115 IYLKEPVTGKKVIGIFLGSIGALTLILSSQGSTDGKGGSIPGDLLCLLAQISFSFYLAIF 174
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ I + M A ++ S + +
Sbjct: 175 KGLISKYNIFTLMKWMFTYAAICFIPFSYHEVSAIHFQEISTSTWACVAYVIVGGTFLAY 234
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G K + + + + Y P++ S+ + + I +V + +
Sbjct: 235 ILMMIGQKTLRPTVISMYNYVQPIVGTSVSILLGMGTFGIAKGIAVALVFTGVYIVTQSK 294
Query: 305 VINS 308
Sbjct: 295 SREQ 298
>gi|262380228|ref|ZP_06073383.1| integral membrane protein [Acinetobacter radioresistens SH164]
gi|262298422|gb|EEY86336.1| integral membrane protein [Acinetobacter radioresistens SH164]
Length = 307
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 91/295 (30%), Gaps = 13/295 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G+LF C+ L+ ++ + +S L + + + +
Sbjct: 10 LGSLFAICSAFLFSTKAIFIKQTYALSPLVDATLLMALRMASALPFFLVICWLNRHRNQD 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
++ + + +++ + L+ L F+ P ++V S+ +++L
Sbjct: 70 IRPREWLLLVLAGILGYYLASWLDFLGLMFISASLERIILFLYPTLTVLASSLIYRQKLA 129
Query: 145 HLQIIAALLIILSLLI-------------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ A LL ++ + L +G+ S +
Sbjct: 130 PKMLFAILLSYSGTVLVMLQEHQSGPENSLWLGAGLVFASAVAFSAYLLLTPHLIHKFGS 189
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + Y + L + L+ + I
Sbjct: 190 WNFTGLALSVACSGTLIHYFLATPQPLVLITQLPASVIWYGIALGILVTVLPTILLMQSI 249
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+R + ++ P+L ++ +V L + ++ + + + ++ +++ L
Sbjct: 250 ERLGAAQSAMIASIGPILTLLLAVVFLDEYLNGWQWLGCILNIVGVMIITLSKRK 304
>gi|254412211|ref|ZP_05025986.1| conserved domain protein [Microcoleus chthonoplastes PCC 7420]
gi|196181177|gb|EDX76166.1| conserved domain protein [Microcoleus chthonoplastes PCC 7420]
Length = 334
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 92/297 (30%), Gaps = 12/297 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFA--- 70
+ PTMM +F A + + ++ + E ++ I +R + ++
Sbjct: 12 QSQLNPSPTMMALFAIFTAIVALSLAAIFIRLSERELGPFATIFNRFWIAFIVLWLLNQS 71
Query: 71 -IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
S + + + ML+ + + + ++L ++ + +TP+
Sbjct: 72 KARSQHDEQSSIPKSEYTVRDWLMLIAAGVMFWGCLALWAWSLTQTGVANSTILHNLTPL 131
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYC 182
+ + + + +I ++ ++ + L +SA
Sbjct: 132 FTTLGVWLIFGQHFDSRFLIGLMMAMVGATALGLDDLQVATDNFAGDIAAFLSALFSAAN 191
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ I M + + + + F + + +
Sbjct: 192 LMLIEKLRAKWDATNIIMWCCLVGTVVTLPVVLLTEDRLFPISGSGWLSVISLAVVCQVV 251
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +Y +KR VG+ P+L + + + + + F +V++ + V
Sbjct: 252 GQGLQAYSLKRLSSGLVGVFLLLDPVLAALVAWVLFSEHLSLFNGFAFAVVLVGIYV 308
>gi|163737120|ref|ZP_02144538.1| membrane protein, drug/metabolite transporter (DMT) family
[Phaeobacter gallaeciensis BS107]
gi|161389724|gb|EDQ14075.1| membrane protein, drug/metabolite transporter (DMT) family
[Phaeobacter gallaeciensis BS107]
Length = 289
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/290 (15%), Positives = 93/290 (32%), Gaps = 16/290 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++WG + + T L S L V R L + + + +
Sbjct: 6 LILTALAPMIWGSSYIVTTTLLPGQSPLLVALLRALPAGLLLMLMV----------RQLP 55
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+LV A ++ W A G + + V P++ VFL ++ LK +
Sbjct: 56 PLNWVPRLLVLGALNFSIFWSLLFVAAYRLPGGVAATLGAVQPLVVVFLSALMLKTPVRT 115
Query: 146 LQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++AA L IL + ++ L GI + + A
Sbjct: 116 AAVLAAGLSILGVALLVLTPSAQLDGIGVFAGLAGAIAMAAGVVLSRKWQPPVSLLTFTA 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L L + +S L + + + ++ GI R + S V
Sbjct: 176 WQLTAGGLLLIPVTLWSLPAFPQLSAENLLGLAYMSLIGGAATYVLWFRGIARLEPSVVS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ +PL +V L + + + G+ + ++ + +
Sbjct: 236 LLGVLSPLSAVVLGWVFLGEVLTAKQATGAGLALFSLWLGQSGLRWRRRR 285
>gi|116327617|ref|YP_797337.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116331772|ref|YP_801490.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
gi|116120361|gb|ABJ78404.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116125461|gb|ABJ76732.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 307
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 91/288 (31%), Gaps = 12/288 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G V + + ++ + + + ++ R+L ++P F I Y SG +
Sbjct: 6 KPFWGISLVLTGAVFFSAKAIFVKLVYRYNIDSTTALALRMLLAIPF-FAWIAYRSGNTN 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +L+ S + F L L + FV P I + +GS+
Sbjct: 65 NNFVNLTKKDWGLILILSFLGYYLASLFDFIGLEYISAGLERITLFVYPTIVLIIGSILF 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
K ++ +I A L+ +++ + A+ ++ Y +++
Sbjct: 125 KRKIKRAEIFAILITYSGIVVAFIGDIQVEGPNTTKGVLFVLGSAIAYALYLVGSESLIP 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
F +L ++ + + L L + G
Sbjct: 185 KLGSVRFTSYLMLLSGSIVIIHFLFTRHPASLIQPTNVYLYGLALGVLTTVIPAYFTTEG 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I+ I+ P+ I+ + L +PI + +V+ +
Sbjct: 245 IRMIGSGKAAIVGSVGPMSTILLAWIFLGEPITLSGLVGTILVLTGAL 292
>gi|83590683|ref|YP_430692.1| hypothetical protein Moth_1849 [Moorella thermoacetica ATCC 39073]
gi|83573597|gb|ABC20149.1| Protein of unknown function DUF6, transmembrane [Moorella
thermoacetica ATCC 39073]
Length = 319
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 87/292 (29%), Gaps = 17/292 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
A +G + + A +L+G + + + + ++ V +GG
Sbjct: 17 AGADRRLGYIAIILASLLYGGNVIAGRVIAPLVPPLALAAARGLLGLPVLLLFALKAGGK 76
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L D M + +++ +G F +++ + + P +++ L ++
Sbjct: 77 PRLAD------LPYMALMGFLGISIAYGTFSWSMQNSPAVNAAIIFATFPAVTLVLLAIG 130
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKT 187
+ + Q+ ++ + L +++ + L S Y +
Sbjct: 131 WHVKPSRYQVAGIIMAFIGLALVSTRGSLAQLLAMRFQPVDLVLLANVTAASLYNILGQR 190
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S + + ++L L + ++ +
Sbjct: 191 MVERYSPIVTSTYSLFFGTLFLLPAGFWEVSRQGWYLPPSGWLLLIYMGCIIAGLAVLLT 250
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R V + PL I + L + + +V+ + +
Sbjct: 251 FEAVERIGCGPVAMFNNLNPLFAIALAALFLGEKLSWYHWAGIILVLGGVCI 302
>gi|42780787|ref|NP_978034.1| EamA family protein [Bacillus cereus ATCC 10987]
gi|42736707|gb|AAS40642.1| transporter, EamA family [Bacillus cereus ATCC 10987]
Length = 303
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 89/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLTVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNASFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|65321858|ref|ZP_00394817.1| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Bacillus anthracis str. A2012]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 94/293 (32%), Gaps = 12/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + L + K +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKDLYIEKSEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KSVLLI-----GIIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G F
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKXGNRDDMFFITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ +++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLVWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQK 292
>gi|332528128|ref|ZP_08404159.1| hypothetical protein RBXJA2T_19271 [Rubrivivax benzoatilyticus JA2]
gi|332112699|gb|EGJ12492.1| hypothetical protein RBXJA2T_19271 [Rubrivivax benzoatilyticus JA2]
Length = 293
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 79/293 (26%), Gaps = 8/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ L + A ++W I + T+ LE EV R ++ + + + G + L
Sbjct: 1 MSRRNAVLLMIVATLMWSIAGVVTRHLEAARSFEVTFWRSAFNALALLALLSWLRGPVPL 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L S +V + F+ L + + P+ + L L
Sbjct: 61 WRSI---RDGGRTLWLSGVCWSVMYTAFMVGLTLTTVANVLVTMALGPLFTALLARFALG 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR-----KTIPVGSSEG 195
RL A + + M + +A T A T +
Sbjct: 118 HRLPARTWGAIAVAGAGIAWMYGQHLHAGDARHLAGTLVALAVPVAAAINWTTLQSRRDD 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+M + F L + + + I +
Sbjct: 178 PGADMLPAVLIGATLSALVTLPLAWPFQASGHDLGLLALLGSVQLAVPCLIAVAVSRVLP 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + ++ + + + + D+ +V+ A+ +
Sbjct: 238 AAEMSLLGLLEVIFGVSWAWLGAGEAPDSAVLAGGLLVLGALAANEWLGMRRR 290
>gi|325499466|gb|EGC97325.1| hypothetical protein ECD227_3563 [Escherichia fergusonii ECD227]
Length = 315
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/312 (14%), Positives = 103/312 (33%), Gaps = 12/312 (3%)
Query: 9 EYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLP 65
+ L+ E + G L V A +LWG + + Q++ Q+S + R++++
Sbjct: 5 DEKTKLNAEENMSSSRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGF 64
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ + A+ +L+FS F+ + + F
Sbjct: 65 ILLTLSFVHGD--KVFSVLQNRHDALRLLIFSIVGALTVQLTFLLTIEKSNAATATVLQF 122
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTW 178
++P I V ++ K R L + A ++ ++ H L IA +
Sbjct: 123 LSPTIIVAWFAIARKARPGILVLTAIFTSLIGTFLLVTHGDPTSLSISPAALFWGIASAF 182
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+A + + + G + + ++ G HF + F +
Sbjct: 183 AAAFYTTYPSTLIARYGTLPIVGWSMLLGGLILLPFYARQGTHFMVNGSLILAFFYLVVI 242
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ F ++ G + I+ PL S+ +L + +++ +++
Sbjct: 243 GTAVTFSLYLKGAQLIGGPKASILSCAEPLSSAFLSLLLLGITFTVPDWLGTLLILSSVI 302
Query: 299 VYLLPTVINSGK 310
+ + + K
Sbjct: 303 LISMDSRRRIRK 314
>gi|322368556|ref|ZP_08043124.1| hypothetical protein ZOD2009_03707 [Haladaptatus paucihalophilus
DX253]
gi|320551840|gb|EFW93486.1| hypothetical protein ZOD2009_03707 [Haladaptatus paucihalophilus
DX253]
Length = 314
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/297 (10%), Positives = 82/297 (27%), Gaps = 7/297 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +WG T+ L+ + + + R + +F L
Sbjct: 1 MASRRDIALYLSLAAVWGTAFPATKAALDGFPPVALAAVRFSLAAFVLFAVAAATGRSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
P VG + A+ + +Y L +TPV++
Sbjct: 61 PRGRGDWTPVLVGGVFNIGLHHALLFAGQVYVTSAVASTLLGLVPVLTPVVTSAFRPEES 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ ++ + ++ + + + + + + + G
Sbjct: 121 ISARGAVGVLLGFVGVVLIANPSAGGFLSDVGVWFVLGAAVAWVVGAVFTDEDDAGLAGL 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFF------LGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ A+ + + + L + + F ++ + R
Sbjct: 181 SLQAWMLAVGALALDAAAFVVPGQGFAAAAPTTSSFVWVLYLAVVPGALGFLVYFRLLHR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+G++EY P V +L + + F ++ ++ P V+ +
Sbjct: 241 LGPIEMGLIEYVIPPFAAVFGWVVLGEGLTPTTGGGFLAILCGFLLVKWPRVVGGIR 297
>gi|307298458|ref|ZP_07578261.1| protein of unknown function DUF6 transmembrane [Thermotogales
bacterium mesG1.Ag.4.2]
gi|306915623|gb|EFN46007.1| protein of unknown function DUF6 transmembrane [Thermotogales
bacterium mesG1.Ag.4.2]
Length = 309
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/307 (11%), Positives = 99/307 (32%), Gaps = 21/307 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ + +++G++ L+T+ LE + + +S+R + +
Sbjct: 4 KERDRLLAYFAGIGSSVIFGLSFLFTKNALEYTNPMYFLSYRFSVAFVTISLL-----RA 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++K +L+ S +++ F + P+ + V
Sbjct: 59 LGVIKVRPYKSIFKDLLLLSLVQPVMYFIFENVGVSLSTSSEAGILLSTIPIFVLIFARV 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---------------WSAYC 182
FLKERL Q+ + L +L ++++T G+ +
Sbjct: 119 FLKERLAAPQVFSVLTALLGIVLITAGKGLSTGGSVLGPIILLGSTVSAAFYNILSRKAS 178
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
K + + I + ++ FS L L +
Sbjct: 179 VRFKAWEITYHMMTMGFISFTLIAVVTSLIKGEFSFYILGLGTPQVAIAALYLGTLSSVG 238
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F + ++ + + + S + Y + ++ +++ V + ++ I ++++ +
Sbjct: 239 AFFLINFMLSKLEASRSTVFVYLSTVVSLLAGVVFRGERFGPLQVIGISLILLGVWGANA 298
Query: 303 PTVINSG 309
+
Sbjct: 299 LARRKTR 305
>gi|300717365|ref|YP_003742168.1| permease [Erwinia billingiae Eb661]
gi|299063201|emb|CAX60321.1| Putative permease [Erwinia billingiae Eb661]
Length = 298
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 90/295 (30%), Gaps = 6/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + V + ILW + + + ++ +++ R L++ + + +
Sbjct: 8 SRHTLGLIMVCLSAILWSSAGFFVRMI-DMNTWAMVAWRSLFAFLSLILLLAWGGYLRRF 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +A ++A+ ++ AL Y P ++ LG +
Sbjct: 67 SFRND----VGLKGLITAAVMAISMFCYVAALKLTSVAGVMTVYATIPFFAMGLGWLIQS 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+++ +I+A + ++ +++M SG + FA + G +
Sbjct: 123 KKITKRALISAAVSLVGVVVMAASASGSGDTAGNALALIMTAGFAASIVMSGKWPEMNLP 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
AL V G + S + +F G + +
Sbjct: 183 AVTALACALCGVFCFAMMPQGLPVPGTHDILWLIAFALSTQSMSYLLFMAGSRHLDPAEA 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ +L + + + I +A+ YL + K
Sbjct: 243 SLIAQADIVLGPMWVWVFFSELPANNTLLGGAITFVAVTGYLAGEYYLKRNSARK 297
>gi|261406460|ref|YP_003242701.1| hypothetical protein GYMC10_2623 [Paenibacillus sp. Y412MC10]
gi|261282923|gb|ACX64894.1| protein of unknown function DUF6 transmembrane [Paenibacillus sp.
Y412MC10]
Length = 304
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 92/276 (33%), Gaps = 13/276 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + + WG + L+ + L+ + +I+ R + L + ++F
Sbjct: 1 MKPLKADLMILFITMCWGSSYLFMKMGLDSLGAFNLIALR--FGLAFMLAGAIFFPRLRR 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T++ IL + + + L T F +T V + +
Sbjct: 59 VNLKTIRYAML------LGFILFIMFTALTFGLKTTTASNAGFLISLTVVFVPLIHTFLF 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG----SSEG 195
+++ I++ LL + + ++T+ + +A C+A V +
Sbjct: 113 MKKIEMKLIVSILLALTGIALLTIQLPFAFKIGDLFCIAAALCYALHINIVSTAAQKVDA 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L L+ + + + T L+ + + F + K
Sbjct: 173 LSLGILQLGFTGLYAFLSSLLLETPAWPSSTDSWTAVLVLSIVCSGLGFIFQTIAQKYTT 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ G++ P+ + + + +D+ +
Sbjct: 233 ATRTGLVFSLEPVFAALFGYWFANEVMDSNQYAGAA 268
>gi|167854824|ref|ZP_02477601.1| hypothetical protein HPS_03256 [Haemophilus parasuis 29755]
gi|167854003|gb|EDS25240.1| hypothetical protein HPS_03256 [Haemophilus parasuis 29755]
Length = 288
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/290 (19%), Positives = 118/290 (40%), Gaps = 8/290 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G LF A IL+G + L + + R++ +P + AI F +
Sbjct: 2 LKGILFSLSANILFGAGYYFAVLLRPLESDSIFGFRIVVLMPFILLAIFLFHQQKAFKDL 61
Query: 84 TLK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P + +L+ A A+ F++A Q S Y + P+++V LG + K
Sbjct: 62 YYRVKQTPYLIFILLLLALNTAIQLWLFLWAPNNNQAIEVSIGYLLLPIVAVALGKLVFK 121
Query: 141 ERLNHLQIIAALLIILSLLI-MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L+ +A L + I + L + I + + Y R+ + + FF+E
Sbjct: 122 EHFTLLKWLALFFATLGVTINIVLTASISWATFVAGFGYPIYIVLRRYFHINNLATFFVE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L A++Y+ + N +L GL+N F ++ ++ +
Sbjct: 182 LLLLLPFAIYYI---AQVDQASILMQNEYLYFYLALLGLVNGMAFILYIASSNLLPINVL 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
G++ Y PL+M+ S I + ++ I+ + +++++ + +
Sbjct: 239 GLLGYAEPLVMLFISFAI-GEVLEAKSYILMACLAVSIILLSVDSFRKVK 287
>gi|121533970|ref|ZP_01665796.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
gi|121307481|gb|EAX48397.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
Length = 290
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/277 (9%), Positives = 87/277 (31%), Gaps = 11/277 (3%)
Query: 29 FVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ ++WG+ + + QV + ++R + + + + +
Sbjct: 4 AIALLCLIWGLNWVVMKQANQVFPPVLFTTYRFILGSGVLLIVTYFKKIPIP------RR 57
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+++ A + +S + P + L E+L +
Sbjct: 58 EDWKWVILGGILQTAFFNTAVQVGMQFLSAGFSSVLSYSMPFWVAIMAHFLLGEKLTRRK 117
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + ++ L+ + SG + A+ + + + +
Sbjct: 118 MTGVAMGMVGLVALLNVSGGGAWWAIVLTLTGAVAWAFSSILVKLKLQHCDILQYTTWQM 177
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ +++ G G + L ++ + +++Y + + I
Sbjct: 178 VVGAIVLSIYSALFGHGTIQWGWYAVGCLVYNGVLASALAYFLWTYILSNTEAGKASISM 237
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
P++ +++ V LK+ + + +++ + +
Sbjct: 238 LIIPIIGVLAGVIFLKETLYWNTVVGMALILGGIWLV 274
>gi|33600570|ref|NP_888130.1| hypothetical protein BB1585 [Bordetella bronchiseptica RB50]
gi|33568169|emb|CAE32082.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 299
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 83/270 (30%), Gaps = 7/270 (2%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
VSV +++ R L + + + +
Sbjct: 33 LSAHVSVFQILFFRSACGLLIIVPLVWRAGWRQVATARPGLHVLRNATH-------FLAQ 85
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
++Y + F PV + L +V L ERL +++A L + + ++
Sbjct: 86 YGWVYGIAFIPMAEVFAIEFTVPVWTALLAAVLLGERLTAARLLAVALGLAGVFVIVRPG 145
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
+ A+AV A FA I +C+L L + ++
Sbjct: 146 SGMIHPAALAVLLGAIAFALAYIMTKMLARTETPLCILFYMTLVQLPLGLAPALANWSSP 205
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+++ G + + + A + V +++ L+ V + I+ +
Sbjct: 206 PPHVWPWILVVGTMGLATHYCLARAMALADATVVVPLDFLRLPLIAVVGAVFYGEAIEPL 265
Query: 286 RTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ G+++ + +L + +
Sbjct: 266 LFLGAGMILAGNLYSILAERRRPAMPRAAR 295
>gi|84686300|ref|ZP_01014195.1| membrane protein, putative [Maritimibacter alkaliphilus HTCC2654]
gi|84665827|gb|EAQ12302.1| membrane protein, putative [Rhodobacterales bacterium HTCC2654]
Length = 291
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 93/288 (32%), Gaps = 8/288 (2%)
Query: 24 MMGTLFVFCAYILW-GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+G ++ +L+ G T + ++ E R + L +
Sbjct: 1 MVGVFWMVVTGLLFVGFTAIVKSTGGRLPAAETAWLRYVLGLLFFVPFA-------RRIL 53
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +G+LV AV + +A+ + ++ PV ++FL E+
Sbjct: 54 SIRLDGPTLGLLVIRGLFHAVGVIAWFFAMTRIPLAEVTAINYLNPVFVTVGAALFLGEK 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L +I A + ++ L++ + A+ ++ FA + +G +
Sbjct: 114 LAFRRIAAIAVALVGALVILRPGVREIEPGHWAMIGTSLAFAVAYLILGPISKRVEPFVI 173
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+A+ +L + ++ + +L + + A L+ +
Sbjct: 174 VAMLSLTVALALTPVALMNWVTPTWSEIGWLFAVAAFATAGHYTMTLAFAAAPLTVTQPI 233
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + + +D G+++ A+ I +
Sbjct: 234 TFLQLVWSVALGAVFFGEGVDPWVIAGGGMIITAVSFITFREAILKRR 281
>gi|329123759|ref|ZP_08252319.1| DMT superfamily drug/metabolite transporter RarD [Haemophilus
aegyptius ATCC 11116]
gi|327469958|gb|EGF15423.1| DMT superfamily drug/metabolite transporter RarD [Haemophilus
aegyptius ATCC 11116]
Length = 300
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/293 (20%), Positives = 120/293 (40%), Gaps = 5/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L + L+GI L++ +L+ +S +V + RVL + G+F + G SLL
Sbjct: 9 IQGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRVLTMIFGLFLILFPTIGCRSLLSL 68
Query: 84 TL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + + F++A L +G + YF+ P+I LG +L
Sbjct: 69 ITTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWL 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KERL+ +Q IA LL + H+ ++ V + + I
Sbjct: 129 KERLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCMVYPFYYLSRKLMKIPALQGIT 187
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ I ++ S L L G++++ ++ +S
Sbjct: 188 LDIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIF 247
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + V+N K +
Sbjct: 248 AVLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGVLNKNKVR 300
>gi|301053231|ref|YP_003791442.1| drug/metabolite exporter family transporter [Bacillus anthracis CI]
gi|300375400|gb|ADK04304.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
biovar anthracis str. CI]
Length = 301
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 62 KQHIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 118 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 178 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 296
>gi|126740823|ref|ZP_01756508.1| hypothetical protein RSK20926_10089 [Roseobacter sp. SK209-2-6]
gi|126718119|gb|EBA14836.1| hypothetical protein RSK20926_10089 [Roseobacter sp. SK209-2-6]
Length = 284
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 86/289 (29%), Gaps = 7/289 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ T G+L + A + + ++ + + I G+F + G
Sbjct: 1 MDTFRGSLLMVLAMATFALEDMFIKSAASNMPVGQILILFGLGGMGIFAGLARAQGHRPW 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
P L L + A+ S TP++ VF
Sbjct: 61 HPGFCARPMLWRCLAEVTGRL-----CYTLAIALTPLSSASAILQATPLVVAAGAVVFFA 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E + + +A + + +L++ G SL + + +
Sbjct: 116 EPVGWRRWLAIAVGFVGVLLILRPGLGGFEPASLFAVIGTIGFAGRDLATRAAPKDMSNN 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ L L + + L + ++ + S ++ ++S
Sbjct: 176 QLGFLGFAMLVIAGVLVLGWTGGAIWPSSTNWLQIAAAVVIGVIAYNALSAAMRAGEISV 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ YT + ++ + I + DT+ I ++V + V LL
Sbjct: 236 IAPFRYTRLVFAMILGILIFDEQPDTLTLIGSALIVGSGVFTLLRARKA 284
>gi|110677939|ref|YP_680946.1| hypothetical protein RD1_0555 [Roseobacter denitrificans OCh 114]
gi|109454055|gb|ABG30260.1| conserved hypothetical membrane protein [Roseobacter denitrificans
OCh 114]
Length = 324
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/315 (9%), Positives = 80/315 (25%), Gaps = 13/315 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV 72
++ + CA L+ + + + V + + R ++LP + +
Sbjct: 1 MATDLTQNKPGRAIALKLCAVFLFMVMAALIKSVSPHVPPGQAVFFRSFFALPVLVLWLW 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L + + ++ + G + L + F ++
Sbjct: 61 QRGQLRQGLVPSNLMGHVWRGIFGTSAMGLTFAGLGLLPLPEVTAIGYATPLFAVLFAAI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
FLG RL+ + + ++I+ +++ + + I + +
Sbjct: 121 FLGERVRIVRLSAVALGLIGVMIVIAPRLSVGADNVTSAATIGAILVLIASILRAMVQIH 180
Query: 193 SEGF------------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
F + W + LI GL+
Sbjct: 181 VRRLVQTDTTASIVFYFSITASTLGLLTLPLGWATGLDVLAWTAPPAWVIWMLILSGLIG 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + S + +Y + + + I +V+ V+
Sbjct: 241 GIAQIMVTASYRFGSASMLAPFDYASMIFASFIGYIAFGELPTGPILIGASLVIAGGVLI 300
Query: 301 LLPTVINSGKNKTKK 315
+ K
Sbjct: 301 IWRERQLGLDRSKSK 315
>gi|78356252|ref|YP_387701.1| hypothetical protein Dde_1205 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218657|gb|ABB38006.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 317
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/286 (9%), Positives = 73/286 (25%), Gaps = 18/286 (6%)
Query: 27 TLFVFCAY--ILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ A I+WG + + ++ E ++ + + +++Y +
Sbjct: 5 MILAALAVVHIVWGGGFIVLKVVQ-----EHLALEHILLGRVILASLLYLLLWKRIPSPC 59
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +L+ + + + F L P+ +E++
Sbjct: 60 YRKGDWKVLLLLALCEPFLLFTFETLGLRYTSASQGGMIVACVPLTVALGAFAVYREKIG 119
Query: 145 HLQIIAA-----------LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ L G + A+ + +
Sbjct: 120 RRCLAGIVCAVCGVVVVSALATAGDQAPAPLLGNFFIFCAVLASTCYALSVKHLCARYHY 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
A H L + V+ + +Y + R
Sbjct: 180 MYLAGVQVFGATVLFVPGALMQPLPPAHVLFSPQVAGSLLYLGLGITFLVYFVINYALTR 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
K + V P+ +V + L + + + G+V+ +++
Sbjct: 240 IKAAVVIQFANLIPVSTLVFAYIFLGERLSPTQYAGVGLVLAGVLL 285
>gi|330808177|ref|YP_004352639.1| hypothetical protein PSEBR_a1440 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376285|gb|AEA67635.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 296
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/282 (9%), Positives = 83/282 (29%), Gaps = 4/282 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI-VYFSGGLS 79
+ + +++G+T ++ + L S ++ R ++++ + +
Sbjct: 1 MTPRTALGALHIGALMFGLTGVFGK-LAAASPTVIVFGRAVFAVLALAMFARFASNSRWQ 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ +G L+ + ++ + + TSF F + +
Sbjct: 60 QLRAQDGWRLLLGGLLLAGHWVSFFIAVKVAGVAVATLGFTSFPAFTVLLEGLIFRERIR 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + +++ L++++ L AV S
Sbjct: 120 ANEIWLVVLVSVGLVLVTPNFDLASGATTGLLW--AVFSGLLFSLLSLTNRAGSAHVPPV 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L + + + + + I + +F + K T
Sbjct: 178 QAALCQNVVVGLCLLPMAAPQLSNVRPIDWLWIGLLGVFCTGLAHSLFVASLAVIKARTA 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ P+ I + ++ + + +++ A+V+
Sbjct: 238 AVVFAMEPVYGIAMAWWLFDESPTLRMLLGGVVIITAIVISS 279
>gi|260549924|ref|ZP_05824139.1| DUF6-containing protein [Acinetobacter sp. RUH2624]
gi|260406916|gb|EEX00394.1| DUF6-containing protein [Acinetobacter sp. RUH2624]
Length = 298
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F Q V V+ R L +
Sbjct: 16 KALLCLMTSALLFSIMGVCIRFASQTVDNATVVFFRNAVGLFIFIPMLF-------KQGL 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 69 DFIKTDKLWMHTWRSLVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + +L+ + + A + V + ++
Sbjct: 129 TKSMIFAAVIGLIGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + LI GLL + SY A +G M
Sbjct: 189 FYFCIFGSLISSIPMFWHWRIFTWHELALLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 249 YIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILL 284
>gi|297568044|ref|YP_003689388.1| protein of unknown function DUF6 transmembrane [Desulfurivibrio
alkaliphilus AHT2]
gi|296923959|gb|ADH84769.1| protein of unknown function DUF6 transmembrane [Desulfurivibrio
alkaliphilus AHT2]
Length = 303
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 90/288 (31%), Gaps = 6/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L++ LWG P+ T + S + ++ VFF ++ S
Sbjct: 3 SEQRKGELYLLAEEFLWGWFPIVTLLTYPYLAP-LWSMGLTLAVAAVFFGLLMSKRLGSN 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L L N +A L +S+ + + + L + F+ + ++
Sbjct: 62 LWRELGNRRAWKDLAWSSFYIMLLFVLLFTGLAHTTAGNAALILFLQVFFAFLYFNLLQG 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+++ + A L+ L ++ L + V +A +
Sbjct: 122 EKMSPPHLAGAALMSLGAFLVLFPGEAGLNKGDLLVLLAAMVAPIGNRYQQRARRHVHAT 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLG-----NIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L + + + + L + L + + R
Sbjct: 182 TLLFVRTVTSLPVVLLLAWAYANPPALADLQATWWLVALNGVFLMGLSKIYWIEALHRLS 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ + M +PL ++ + FIL++ + ++ ++ P
Sbjct: 242 VTKISAMTALSPLFTMLFAFFILQEVPGGWQVAGILPILTGGMLITRP 289
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 12/134 (8%), Positives = 30/134 (22%)
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
T P + +A ++ LGN L
Sbjct: 19 WGWFPIVTLLTYPYLAPLWSMGLTLAVAAVFFGLLMSKRLGSNLWRELGNRRAWKDLAWS 78
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+F + G+ ++ + + + + + ++ +
Sbjct: 79 SFYIMLLFVLLFTGLAHTTAGNAALILFLQVFFAFLYFNLLQGEKMSPPHLAGAALMSLG 138
Query: 297 MVVYLLPTVINSGK 310
+ L P K
Sbjct: 139 AFLVLFPGEAGLNK 152
>gi|228957245|ref|ZP_04119011.1| Transporter, EamA [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802436|gb|EEM49287.1| Transporter, EamA [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 320
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 37.2 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|194468231|ref|ZP_03074217.1| protein of unknown function DUF6 transmembrane [Lactobacillus
reuteri 100-23]
gi|194453084|gb|EDX41982.1| protein of unknown function DUF6 transmembrane [Lactobacillus
reuteri 100-23]
Length = 300
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 95/297 (31%), Gaps = 14/297 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
S ++GT + A WGI+ L+ + L ++ + + R++ + +
Sbjct: 1 MSNKKVLGTAMIITACTFWGISGLFAKALFNVSSSITSMWLTQVRMVSAGIILVLLSQIR 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ L + + L + A+ + + F+ P +
Sbjct: 61 GEHPFQIFKDLHSAWIIFAYGVFG--LVPVQYAYFMAVQYGNASIATILQFIGPFFIIAY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARK 186
++F ++II+A++ L + I+ H L++ ++V A
Sbjct: 119 QAMFRHLPPRRIEIISAIIAFLGVFIIATHGQFNHLAMTLSVLIWGLISAIGVATNTLIP 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + + H L + F +
Sbjct: 179 QNMLREGRVPSLIITGWGLLFAGLTLVLIHPSQPHIPNIPSVWLYVLGILVIGTLIPFQL 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +K +T +M+ PL + SV I + + +V++A++ +
Sbjct: 239 ANNSLKYIDATTFSLMDAFEPLSATIGSVLIFHLQMTGADILGSILVIVAVLAINIR 295
>gi|261253071|ref|ZP_05945644.1| permease [Vibrio orientalis CIP 102891]
gi|260936462|gb|EEX92451.1| permease [Vibrio orientalis CIP 102891]
Length = 293
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 87/290 (30%), Gaps = 12/290 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ L G+ ++++ ++ + + R L + + L
Sbjct: 11 LVATTALAGLGWIFSKETIQGLPPFGFVGLRFLVASICLLPLCFKQVRLL-------TTQ 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + ++ +F ++ +I + V KER
Sbjct: 64 LLSQAVGGGMILAFALLSWVHAISISETLGEGAFIVSLSMIIVPIIAWVLYKERPKRAFW 123
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS----EGFFIEMCVLA 204
I+ + + L +++L G + I +A A + L
Sbjct: 124 ISMPIAVSGLAMLSLTDGWNSSTGQIWFLANACMLALHFNVNSKLAQKIPVLLLTAIQLG 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + ++ + + F + L S + + + G K ++
Sbjct: 184 VTGVIALIASALFETIPTHVETSIWGWFALSALLATSLRYVMQTLGQKGCNPGNAALIML 243
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P+ ++ S+ + + + + ++++A++ Y + +
Sbjct: 244 LEPIWTVILSILWYGEQLSRNKLMGCSLILLALIFYRTDGKLLKFVKRAS 293
>gi|229189132|ref|ZP_04316158.1| hypothetical protein bcere0002_8170 [Bacillus cereus ATCC 10876]
gi|228594359|gb|EEK52152.1| hypothetical protein bcere0002_8170 [Bacillus cereus ATCC 10876]
Length = 295
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/279 (12%), Positives = 88/279 (31%), Gaps = 13/279 (4%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ WG + L T+ LE + +I+ R + + +
Sbjct: 11 LLLVTFFWGASILLTKVGLEGIEEYNLIALRFIIAFLLSGLIFY--------KHLFKIDF 62
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K V A++L + + F + F +T + L ++FLK I
Sbjct: 63 KTVKYAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPILSAIFLKHIPEKKVI 122
Query: 149 IAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ L I+ + ++TL S G + ++ + A + + L
Sbjct: 123 VGIFLTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVIQLG 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
LF ++++ + L + F + + + G++
Sbjct: 183 FVGLFSLIFSFIIETPKLPSTTNSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFS 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ +
Sbjct: 243 LEPVFSAGFAFVFTGETLTGKGYLGATLILVSVLIAEVD 281
>gi|149182537|ref|ZP_01861009.1| hypothetical protein BSG1_08831 [Bacillus sp. SG-1]
gi|148849729|gb|EDL63907.1| hypothetical protein BSG1_08831 [Bacillus sp. SG-1]
Length = 302
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/285 (9%), Positives = 79/285 (27%), Gaps = 6/285 (2%)
Query: 29 FVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ ++WG++ ++ + + + V R L + + + +
Sbjct: 7 ALITLSLIWGLSFVFIKVIVDPAGVWGTTFLRCLAGVLILLPLFIRNRMKKEKAPLPIGK 66
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV---FLKERLN 144
VG++ + W T + + + V F +
Sbjct: 67 LLIVGLVNAGLPWTLIAWSETQINSNTASILNATTPLWTALIGFALFSVVLSGFQWIGIL 126
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +L+ + + + I + ++ +A + + + L
Sbjct: 127 VGFLGILVLMDFQVAGLFTSNFIGIGTMLLATICYGFVGQYTKRALKGVSMVVMSTFQLL 186
Query: 205 IPALFYVVWNGFSGGEHFF--LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + F+GG + L + + ++ Y + +
Sbjct: 187 VGMATGLTGMLFTGGIQWTALLDPKVILSIIGLGCFGSGIAALLYFYVLTNGSPEFASTV 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P +V +L +PI + + I+ + +
Sbjct: 247 TYLIPASAMVWGFVLLGEPITSNLILGLLIIFAGVFLSSRKGKKR 291
>gi|126734504|ref|ZP_01750250.1| hypothetical protein RCCS2_11544 [Roseobacter sp. CCS2]
gi|126715059|gb|EBA11924.1| hypothetical protein RCCS2_11544 [Roseobacter sp. CCS2]
Length = 300
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 87/295 (29%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
M G LF+ CA + + + L V + + I R + ++ +
Sbjct: 5 SDNMRGALFMVCAMCAYTFNDAFMKALSDEVPLFQAIFLRGIGAVIFLAIMCRLLGQFRF 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ F L L V+ ++ LG
Sbjct: 65 GFALRDWGLLLLRTAGELGGTFFFLTALFNMPLANVSAILQVLPLSVSLAAALILGE--- 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
L ++ A + + +L++ G S +I + C + I +
Sbjct: 122 --ALGWRRLTAIFVGFVGVLLIIQPGGADFSSYSIYALCAVACATMRDIAMRRMSRDVPA 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL-IGYGLLNSFVFCIFSYGIKRAKLST 258
+ V I A+ + + + G F + + ++ ++
Sbjct: 180 VFVALIAAVGVMGFGAIGSLFTPWQPLTTTAGLQLGGAMTFMIFAYIASASAMRFGEIGF 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V YT+ L+ ++ V + + + + GIVV + L +++
Sbjct: 240 VAPFRYTSLLVALILGVVVFDEWPNALALTGGGIVVATGLFTLYRETKLQIRHRV 294
>gi|262173069|ref|ZP_06040746.1| permease [Vibrio mimicus MB-451]
gi|261890427|gb|EEY36414.1| permease [Vibrio mimicus MB-451]
Length = 297
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/275 (10%), Positives = 80/275 (29%), Gaps = 1/275 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F LS+ +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVAFAAFSLFLVAQLLKKSLSIRQYWRHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L + +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFFWHGTPLTRKALAGLLLGVTGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ + + L + A+ +Y A F A +V
Sbjct: 133 AVIVGWDVAAIGPEASLPIICAALAAGSYGLATNYTKQAPQVSAFENAHGSMWAACIWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
++ + + + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMLFVPLRQSPSSMEWSAVIALGVICTGLAYLIYFRLVKEIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+IL +P+ I +V+ ++ ++
Sbjct: 253 WGYWILDEPVGLNTLIGTVLVLAGTMLVTGFSLRR 287
>gi|260904265|ref|ZP_05912587.1| hypothetical protein BlinB_02962 [Brevibacterium linens BL2]
Length = 313
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/307 (8%), Positives = 86/307 (28%), Gaps = 21/307 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFF-AIVYFSGGLSLL 81
MG L + + ++ + + ++ V+ R+ S + +I+ G +
Sbjct: 1 MGFLLTLASAFFFAVSGPIAKTMYEIGWTPGSVVLIRLAGSAVLLLVPSIIALRGRWDEV 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K G++ + + A+ + P++ VF +
Sbjct: 61 RRHWKTVLTYGLVSMAGVQGF-----YFVAVEHLTVAVALLLEMTAPMLIVFWIWARTRT 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R + I ++ ++ L+++ + + + +A V + + +
Sbjct: 116 RPATVTFIGVVVSMIGLVLILNLRNSDISIFGVVMALAAAVCLASYFLVSAKDSINVPPV 175
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNI-------------PDTLFLIGYGLLNSFVFCIFS 248
L + + L + + +
Sbjct: 176 ALTGLGMGVGALAMSLIVFTGVMPAGAVAADVDFGGYKVSWILPMAMIVVFTVGAYITGI 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G++ + + ++ + IL + ++ +V + +
Sbjct: 236 LGLRYIGATVGSFVNLIEVPFSVIVAWLILFEMPAPIQLFGGVFIVAGVGFIKWGEARLA 295
Query: 309 GKNKTKK 315
+ +++
Sbjct: 296 RRVASRE 302
>gi|118380946|ref|XP_001023635.1| Integral membrane protein DUF6 containing protein [Tetrahymena
thermophila]
gi|89305402|gb|EAS03390.1| Integral membrane protein DUF6 containing protein [Tetrahymena
thermophila SB210]
Length = 408
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/314 (10%), Positives = 95/314 (30%), Gaps = 16/314 (5%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLW 62
+ ++ +SK + G ++ A I + + + + +E Q+S LE++ +R L+
Sbjct: 91 SISEQDGGSVSKFQQLMGNKKGIFYMIIASICFSFSAFFVKKVENNQISELELMFYRSLF 150
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILA---------VHWGFFIYALL 113
+ +F + + K + + + + Y +
Sbjct: 151 IIFFLFIIYKLSQRDEHPDNEIQEYSKNNITFIHMSERNFVKIYSILNGIIVFSYFYGIK 210
Query: 114 TRQGFLTSFSYFVTPVISVFLGSVFLKE----RLNHLQIIAALLIILSLLIMTLHSGI-P 168
+ + + G L + + ++I +LI + + +++
Sbjct: 211 MLPLYEAVSLQNCSMFFTGIFGCFSLFQTSSIKFQAKELICIVLIGIGVYLISYQESFKA 270
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ I ++ + ++ F + + L + +
Sbjct: 271 SMVCIIGGSFVSALIQVIIRRYQTNTEFMKLLFYTSFIQLIVSPIYILFFLKFHHVSLQD 330
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L I L + + + + V + ++ F L+ + I
Sbjct: 331 IILIAIQAFLQIAGTKYLQMSFMSLSDGRYVNFHVQGQIVFTLILGHFFLQDKLQRNSLI 390
Query: 289 VFGIVVIAMVVYLL 302
+V + ++ +L
Sbjct: 391 GCLFIVASSILMIL 404
>gi|47564908|ref|ZP_00235952.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
gi|47558281|gb|EAL16605.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
Length = 295
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 88/279 (31%), Gaps = 13/279 (4%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ WG + L T+ LE + +I+ R + + +
Sbjct: 11 LLLVTFFWGASILLTKVGLEGIEEYNLIALRFIIAFLLSGLIFY--------KHLFKVDF 62
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K V A++L + + F + F +T + L ++FLK I
Sbjct: 63 KTVKYAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPILSAIFLKHIPEKKVI 122
Query: 149 IAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ L I+ + ++TL S G + ++ + A + + L
Sbjct: 123 VGIFLTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVIQLG 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
LF ++++ + L + F + + + G++
Sbjct: 183 FVGLFSLIFSFIIETPKLPSTTNSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFS 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + +++I++++ +
Sbjct: 243 LEPVFSAGFAFVFTGETLTGKGYLGATLILISVLIAEVD 281
>gi|325271988|ref|ZP_08138437.1| hypothetical protein G1E_03942 [Pseudomonas sp. TJI-51]
gi|324102889|gb|EGC00287.1| hypothetical protein G1E_03942 [Pseudomonas sp. TJI-51]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 96/286 (33%), Gaps = 11/286 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G+L + A ++ G + + VLEV+ R ++ + F
Sbjct: 1 MDNSLRRGSLEMVAAMLISGTIGWFV-LASGLPVLEVVFWRCVFGAVTLLVICAAFG--- 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + + A+ + + S + +W + + + Y V P + V L ++F
Sbjct: 57 -FLRPGVISRPALLLAIASGVAIVGNWLLLFASYSRASIAIGTAVYNVQPFMLVGLAALF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L E++ ++ + L +L + G L +A +A + +
Sbjct: 116 LGEKITLAKLSWLSVAFLGMLAIVSAHGAAQGGGEDYLLGIALALGAALLYAIAALIIKR 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + L + V+ ++ L + ++ + I+
Sbjct: 176 LSGTPPHLIALVQVSTGVVLLAPWAKLGGLPGEMPALASLLTLGVVHTGLMYVLLYSAIQ 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
R + G + + P+ I+ + ++ + ++++A
Sbjct: 236 RLPTALTGALSFIYPIAAILVDWVAFDHRLTPLQWLGVALILLAAA 281
>gi|255008685|ref|ZP_05280811.1| putative transmembrane transporter [Bacteroides fragilis 3_1_12]
Length = 324
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 94/285 (32%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ ++WG T + T+ L +S ++++ +R L + ++F +
Sbjct: 38 VMAAVTVMIWGTTFVSTKVLIKYGLSPVDILFYRFLLAYICIWFF-------SPRVLRAK 90
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK-ERLN 144
+ + ++++ AL S TPV++ L F K ++L
Sbjct: 91 SWQDELRFVGLGLCGGSLYFVAENTALGMTLASNVSLIICTTPVLTALLAPFFYKGDKLK 150
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSE 194
+ +L+ ++ + ++ + L + + R +
Sbjct: 151 ARLVGGSLIALIGVGLVVFNGSFILQLSPVGDILTLAAALMWAFYCLLLRRMNTHYPTLF 210
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + H + L + + + +++ +K+
Sbjct: 211 ITRKVFFYGLLTLLPLFFVSPLQMDTHILFQPVVVLNLLFLGVIASMLCYIMWNTAVKQL 270
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y PL+ +++S ++ + I V + +++ + +
Sbjct: 271 GVVCTTSYIYVVPLITLLTSAIVIDETITIVALLGSALILSGVYI 315
Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 39/138 (28%), Gaps = 1/138 (0%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
+ AVT + + V G + L Y+ FS
Sbjct: 34 GWYHVMAAVTVMIWGTTFVSTKVLIKYGLSPVDILFYRFLLAYICIWFFSPRVLRAKSWQ 93
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVR 286
+ F+ S F + + S V ++ T P+L + + F +
Sbjct: 94 DELRFVGLGLCGGSLYFVAENTALGMTLASNVSLIICTTPVLTALLAPFFYKGDKLKARL 153
Query: 287 TIVFGIVVIAMVVYLLPT 304
I +I + + +
Sbjct: 154 VGGSLIALIGVGLVVFNG 171
>gi|229132507|ref|ZP_04261357.1| Transporter, EamA [Bacillus cereus BDRD-ST196]
gi|228650944|gb|EEL06929.1| Transporter, EamA [Bacillus cereus BDRD-ST196]
Length = 303
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 88/292 (30%), Gaps = 15/292 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T + Q + V R L++ + F + FS S
Sbjct: 11 LALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSKKASKQDIKQS 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + L V + + LL F ++ V+ L +FLK++
Sbjct: 71 SL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLKQKATIF 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IPVGSSEGF 196
++ + L ++T L I V A FA P+ S
Sbjct: 127 IVMGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISPLLLSTSQ 186
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + + F + + S F I + K
Sbjct: 187 VLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTSLFATSIAFFIQTSAQKHTSP 246
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 247 TRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|253699970|ref|YP_003021159.1| hypothetical protein GM21_1341 [Geobacter sp. M21]
gi|251774820|gb|ACT17401.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M21]
Length = 321
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 85/281 (30%), Gaps = 17/281 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQV---SVLEVISHRVLWSLPGVFFAIVYFS 75
A + G L + A +LWG + T+ + + + L + R+ SLP +F
Sbjct: 7 ARAESRRGLLLIMLAAVLWGTVGISTKTIYHLAATNPLSIGFFRLAISLPVLFSICWARQ 66
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + M + +F T T + PV+ +
Sbjct: 67 GKK---MLQVSRGDLGLMTLIGLMSALYQVCYFGAVARTGVAVATVVTLCTAPVMVAVIS 123
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
F ++R + ++A + + +++ L L + S
Sbjct: 124 VAFTRKRPSRSTLVALVGALSGTVVLVLFQDRGLAPHGGLTGADGGGIVLALVSAFSYGL 183
Query: 196 FFIEMCVLAIPALFY-----------VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ LA + V GF+ + L + + + +
Sbjct: 184 VTLTSQKLAAHRDPFQSLAISFSIGAAVLFGFAEDMVMSYTPLAWMLLVYLGTIPTALAY 243
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTV 285
+F G++ + I P++ + + F+ + +
Sbjct: 244 VLFFKGMRSTSATAASISTLLEPMVATLLAWFLFGERFTPM 284
>gi|312881129|ref|ZP_07740929.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
gi|310784420|gb|EFQ24818.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/277 (9%), Positives = 80/277 (28%), Gaps = 13/277 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + WG+ + + L+ + + R L + + +
Sbjct: 12 AALLGVALFWGMGYVAMKAALDSFTPFWLTVFRFLSAFALLCALF--------GRRLVRL 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+P A+ + + +L++ + L +F V+ FL +
Sbjct: 64 SPSALKAGLLAGGLLSLGFWVSTVGLQYTTAGKQAFIVTAYVVVVPFLLWAATRRFPGFG 123
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+AA L + + ++TL G+ + + A V + +
Sbjct: 124 PFLAAALCLCGMFLLTLQDNFAIGLGDGLSLLCALFLALHMVVVERFVREIDPVAFAVLQ 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + V + + L F + K + ++
Sbjct: 184 IGVVGVATVPLALAFEPFPGAVAPLGWAALAYNVLLGTVFALVTQNLAQKYTSSTHTALI 243
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ +L + + ++ +++++
Sbjct: 244 LSLEGVFGALTGALLLGESFTMRMVLGCALIFVSILM 280
>gi|227498766|ref|ZP_03928908.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904220|gb|EEH90138.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 302
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 88/287 (30%), Gaps = 13/287 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +LWG P+ ++L + + + R L + V YF G + K
Sbjct: 15 YILLSLIGLLWGFQPITLKWLLPYWTPATITTFRFLV-VGMVILFYQYFRLGRDMAKLLP 73
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ ++ + L ++ TP I+ + L E +
Sbjct: 74 RKTDWPWIVFMGINGQMLNSVLQFHGLQFTTVTNSTLITATTPAITSVCAYLILHEAFSK 133
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV-----------GSSE 194
Q + LL +L + ++ +C A +
Sbjct: 134 KQWLGILLSFSGVLAVITKGNFDIIRTMSFNVGDVFCIASQLAWAFYSLASRKLTGHMDV 193
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ C L A + + L +P +L ++ G+K
Sbjct: 194 LTALGWCSLCGTAGTAIYGIFSNTLVLSPLPPVPFLSYLYITLFGGIAANVFWNIGVKNV 253
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + P++ +V+ I PI ++ + ++ + + +
Sbjct: 254 GPSVSSVFLNFTPVMGMVAGYLIFADPIGPLQIVGASVIFVGVYLTT 300
>gi|170708293|ref|ZP_02898738.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|190566652|ref|ZP_03019569.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|229603684|ref|YP_002865410.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|170126814|gb|EDS95696.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|190562204|gb|EDV16172.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|229268092|gb|ACQ49729.1| transporter, EamA family [Bacillus anthracis str. A0248]
Length = 320
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IV+ ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIVGTMIVMTGCYLFS 302
Score = 36.4 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|153812646|ref|ZP_01965314.1| hypothetical protein RUMOBE_03053 [Ruminococcus obeum ATCC 29174]
gi|149831350|gb|EDM86438.1| hypothetical protein RUMOBE_03053 [Ruminococcus obeum ATCC 29174]
Length = 304
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 78/289 (26%), Gaps = 13/289 (4%)
Query: 28 LFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL-----SLL 81
L + +WG+ + + ++ + + R L + I +
Sbjct: 12 LLLLLTATIWGVAFVAQSVSMDYIGGFTFNAVRNLIGALTLLPVIWGLGKTKAPEEKKRI 71
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + +L F + + F VI +G K+
Sbjct: 72 QASSDRKTLITGGICCGILLCFASNFQQFGIKYTSVGKAGFITACYIVIVPIIGIFLKKK 131
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEG 195
+ IA +L + L ++ L G I + +G
Sbjct: 132 C-SPFIWIAVILSLCGLYLLCLTPGEGFAIGKGELLVLICAFLFSLHILTIDHFSPLVDG 190
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + L + + + G K
Sbjct: 191 VKMSCIQFLVCGILSGIPALIFESPDLAGIFAAKIPVLYAGVMSCGVAYTLQIVGQKNMN 250
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ + +++ IL Q + + ++ A+++ LP
Sbjct: 251 PTVASLILSLESCISVIAGWLILGQNLSSREIFGCVLMFGAIILAQLPQ 299
>gi|146307424|ref|YP_001187889.1| hypothetical protein Pmen_2401 [Pseudomonas mendocina ymp]
gi|145575625|gb|ABP85157.1| protein of unknown function DUF6, transmembrane [Pseudomonas
mendocina ymp]
Length = 287
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 88/258 (34%), Gaps = 7/258 (2%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
V+ V+ R L + ++ + ++ T
Sbjct: 36 ASVNNESVVFFRNLVGVLFFLPLLLVRG-------VRPLRTTRLKSHLWRTTYGLAAMYC 88
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
F YA+ + PV + + ++LKE L ++++L+ + +L++ S
Sbjct: 89 FFYAIAHLPLADAMLFTYSAPVFTPLIAHIWLKEPLTRRMLVSSLIGLCGVLLVAKPSAA 148
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
A+ ++ A + + ++ +LF +++ + +
Sbjct: 149 LFEGAALVGLAASLLAAFAFVSIREMSDSEPATRIVFYFSLFSALFSAIPLTWSWQPLDA 208
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+L+G GLL + I S A +G + Y A + + + + + D++
Sbjct: 209 TQLSWLLGIGLLATASQVIMSRAYGLAPPGLIGPVAYLAIVFAGIIAWLLWGETPDSLSL 268
Query: 288 IVFGIVVIAMVVYLLPTV 305
+ ++ A ++ +
Sbjct: 269 LGAALIFAASLLSVARRR 286
>gi|77459143|ref|YP_348649.1| hypothetical protein Pfl01_2918 [Pseudomonas fluorescens Pf0-1]
gi|77383146|gb|ABA74659.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 315
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 98/301 (32%), Gaps = 20/301 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + ++WG T + +FL +S + S R L + + + L+
Sbjct: 17 YLNLALVTMIWGGTWVAGRFLAGSLSPVFAASLRFLLASVALLGFLRLARIALARPTP-- 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + + + F Y L S + P + + KERL+
Sbjct: 75 --RQWLQLALLGFFGIFFYNLCFFYGLRYINASRASLIVALNPAVIGLASWLLFKERLSR 132
Query: 146 LQIIAALLIILSLLIMTL----------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L++I ++ I ++ + L + S ++ + + S G
Sbjct: 133 LKVIGIVICIGGAGVVIVSRHPQLLSETPDAWIGDLLILGCVLSWGVYSLFSRSLNQSIG 192
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFF-----LGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + S GE LG+ L ++ + + G
Sbjct: 193 PVQTVTFSILLGTLMLWALALSRGEVDVAALAALGSRQWLSLAYLGVLGSALAYIGYYDG 252
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I++ + G+ PL +++ +L + + + +++ + + P K
Sbjct: 253 IRKIGATRSGVFIALNPLTAVLAGAILLGEQLTLAMCLGGALILTGIWLCNKPLAPAGKK 312
Query: 311 N 311
Sbjct: 313 R 313
>gi|300718325|ref|YP_003743128.1| hypothetical protein EbC_37500 [Erwinia billingiae Eb661]
gi|299064161|emb|CAX61281.1| Putative membrane protein [Erwinia billingiae Eb661]
Length = 306
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 19/303 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +G L + + + + L + EVI R +L + + L
Sbjct: 1 MNSKLGVLLKLLSALCATLMLACVKGLSGTIPTGEVIFFRSFVALFPLLIWLKMQGNILP 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K + + F AL+ + + P+ +V L +V L
Sbjct: 61 QIKTR-----NIFGHLIRGFSGTGGMYFNYMALVYLSLADATAISYAAPLFTVILAAVLL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-------------SGIPLLSLAIAVTWSAYCFARK 186
KE + + +A ++ +L+M + + +A C A
Sbjct: 116 KETVQLYRWLAVVIGFSGILVMLSAHLNDGGSLLAGNALNLSAGLGILLGLMAALCTAVS 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + G ++ +L ++ + + + + L L+G G +
Sbjct: 176 LVQIRFLNGIEKPGAIVFYFSLMTMLIGLSTLYFGWVMPDSTQLLLLVGCGFFGGMAQIL 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ A S + +YT + ++ L + + IV A + +
Sbjct: 236 VTLSLRYADASLLAPFDYTTLVWSMLIGYLFLNSLPGSSTIVGAVIVASAGIFTVWSERR 295
Query: 307 NSG 309
Sbjct: 296 KRK 298
>gi|229151247|ref|ZP_04279453.1| Transporter, EamA [Bacillus cereus m1550]
gi|228632247|gb|EEK88870.1| Transporter, EamA [Bacillus cereus m1550]
Length = 312
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/309 (11%), Positives = 93/309 (30%), Gaps = 17/309 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 69 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 124 KQERFSMKVQIGSIVAFVGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + VV+ F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVVYCLFNINTLTWPVDMPSWGSLAYSIVFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 244 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIQK 303
Query: 308 SGKNKTKKS 316
N K S
Sbjct: 304 QALNLKKVS 312
>gi|217978712|ref|YP_002362859.1| protein of unknown function DUF6 transmembrane [Methylocella
silvestris BL2]
gi|217504088|gb|ACK51497.1| protein of unknown function DUF6 transmembrane [Methylocella
silvestris BL2]
Length = 358
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/299 (8%), Positives = 84/299 (28%), Gaps = 5/299 (1%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVF 68
+ +N G + +L+G ++ L + + L + G+
Sbjct: 2 ARSSMLSKNLGQ-RWPGVHLALLSALLFGALTPLSKLLLGSLDPQLLAGVLYLGAGVGLA 60
Query: 69 FAIVYFSGGLSLLKDTL-KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+ + + ++ + ++ + + L + +
Sbjct: 61 ITQIARASFGASTREAPLRGADLPWLIAIVLFGGFLAPLALMLGLAQTDAASGALLLNLE 120
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
V ++ + +E ++ ++ A I+ ++++ + G L + A
Sbjct: 121 SVATLAIAWTLFRENVDRRLLLGAFAILAGAVLLSWNGGSVRLDRGALLIAGACLAWGLD 180
Query: 188 IPVGSSEGFF--IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ +++ ++ A + L
Sbjct: 181 NNLTRKLSSADPVQIAMIKGFAAGGANIGLALWRGAEPGSAGLMGAAALVGFLAIGVSLV 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
F ++ + G AP + + +V +L +P+ ++ + ++L
Sbjct: 241 AFILALRHLGAARTGAYFALAPFIGALLAVLLLHEPLTAKLVAAGLLMGAGLWLHLAER 299
>gi|163740467|ref|ZP_02147861.1| membrane protein, drug/metabolite transporter (DMT) family
[Phaeobacter gallaeciensis 2.10]
gi|161386325|gb|EDQ10700.1| membrane protein, drug/metabolite transporter (DMT) family
[Phaeobacter gallaeciensis 2.10]
Length = 289
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 93/290 (32%), Gaps = 16/290 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++WG + + T L S L V R L + + + +
Sbjct: 6 LILTALAPMIWGSSYIVTTTLLPGQSPLLVALLRALPAGLLLMLMV----------RQLP 55
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+LV A ++ W A G + + V P++ VFL ++ LK +
Sbjct: 56 PLNWVPRLLVLGALNFSIFWSLLFVAAYRLPGGVAATLGAVQPLVVVFLSALMLKTPVRT 115
Query: 146 LQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++AA L IL + ++ L GI + + A
Sbjct: 116 AAVLAAGLSILGVALLVLTPSAQLDGIGVFAGLAGAIAMAAGVVLSRKWQPPVSLLTFTA 175
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L L + +S L + + + ++ GI R + S V
Sbjct: 176 WQLTAGGLLLIPVTLWSLPSLPQLSAENLLGLAYMSLIGGAATYVLWFRGIARLEPSVVS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ +PL +V L + + + I G + ++ + +
Sbjct: 236 LLGVLSPLAAVVLGWVFLGEVLTAKQAIGAGFALFSLWLGQSGLRWRRRR 285
>gi|85704762|ref|ZP_01035863.1| membrane protein, putative [Roseovarius sp. 217]
gi|85670580|gb|EAQ25440.1| membrane protein, putative [Roseovarius sp. 217]
Length = 288
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 88/287 (30%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T +G + +++ + ++ L E+ +VL V+ R + V +GGL
Sbjct: 4 QNTRLGIWLMVLTTVIFAVQDGISRHLAEEYNVLMVVMIRFWFFAAFVMVIAARKAGGLR 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T + M F A +L IY + P++ L L
Sbjct: 64 AAATTSQPL----MQGFRAVLLVAEICVMIYGFTLLGLIEVHAVFACYPLLIAALSGPVL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ + A + + +LI+ + AI +A FA +
Sbjct: 120 GERVGWRRWAAIGVGFVGVLIILEPGVGVIDPKAIVPFIAALMFALYGLLTRYVARRDTA 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +G + +++I + + + A+ S V
Sbjct: 180 ATSFFWTGTVGSIAMTLAGIWFWEPMTGDAWVWMITLCITGAAGHYTLIKCYEVAEASAV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y + +FI + I + +VV A + L
Sbjct: 240 QPFAYLQLFFVTGIGIFIFGETIRMNVAVGGALVVGAGLFTLWRQRR 286
>gi|306831152|ref|ZP_07464313.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426718|gb|EFM29829.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 322
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 92/285 (32%), Gaps = 15/285 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ +F A ++ + L + + +RVL+S+P + I
Sbjct: 34 NSIKDICLIFLAICFLATGGIFVK-LSPLPPINTGFYRVLFSIPMLLPFI-------KKS 85
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K + ++ + LA F+ + + +TP + + KE
Sbjct: 86 DVQALSRKQIMTIILAGAFLAGDLTFWNSSFSYTSVANANLLVNLTPFTVIPVSYFLFKE 145
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSE 194
++ ++ L+ ++ +L++ + + A + A + +
Sbjct: 146 KMTPKFLLGGLVTLVGVLVLMANKVSLSSDRLLGDSLSLGASIFYAMFMITVYQLRDTVK 205
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I L V + G + L + + +Y + +
Sbjct: 206 SNVIMFFSAFGTLLVLAVVIFLTEGFYLPQNIADLLPLLALALVSQILGQGLLAYCLGKV 265
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S ++ + P++ + + I ++ ++ I I +I + +
Sbjct: 266 NASLSSLITLSQPVIAALYAWVIFQENLNLQSVIAIVITLIGVYL 310
>gi|293417120|ref|ZP_06659747.1| inner membrane transporter yicL [Escherichia coli B185]
gi|291431151|gb|EFF04144.1| inner membrane transporter yicL [Escherichia coli B185]
Length = 307
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPSALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|229191144|ref|ZP_04318133.1| Transporter, EamA [Bacillus cereus ATCC 10876]
gi|228592294|gb|EEK50124.1| Transporter, EamA [Bacillus cereus ATCC 10876]
Length = 309
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTPSWESLAYSIVFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINLMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|71083713|ref|YP_266433.1| DMT family permease [Candidatus Pelagibacter ubique HTCC1062]
gi|71062826|gb|AAZ21829.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Candidatus Pelagibacter ubique HTCC1062]
Length = 270
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 82/269 (30%), Gaps = 7/269 (2%)
Query: 39 ITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
I + ++L + VL++ R +++ + F + D K + +
Sbjct: 4 IMDGFAKYLSADMPVLQITWARYFFTVAFTLPIMFLFYNKQLVWTDKPK------LQIIR 57
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
IL F YA+ FV P+I +FL E++ + A ++ +
Sbjct: 58 GLILLSANICFFYAISVISLAKALTLAFVAPLIVTAFSPIFLGEKVGIRRWTAVIIGFIG 117
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
L++ + + ++A + + I + L + L ++
Sbjct: 118 SLVVIRPGFVEINLASLAALGTGVMYGFYLIITRKLSTSDNPLLTLLLTGLVGLIAVSGL 177
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + G+ +K A S + Y + I+ +
Sbjct: 178 MPFVWVNPTPSQWSMMASIGVFACIGHLFLILSLKYADASKLAPFSYFEIITNIIIGYYF 237
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
D + I++++ V
Sbjct: 238 FSDFPDNWTFLGLSIIIMSGVYISRRESY 266
>gi|332978066|gb|EGK14804.1| DMT superfamily drug/metabolite transporter [Desmospora sp. 8437]
Length = 311
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/304 (10%), Positives = 82/304 (26%), Gaps = 16/304 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + + +WG T + Q ++ + ++ R + ++ + +
Sbjct: 1 MSARQIRADAALLSIAFVWGSTFVLVQGAIDTLPPFAFLAFRFGLASILLWGFLCWRGKH 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
P L + + F +LL + F ++ + L
Sbjct: 61 RQAFAKQTLRPGIF-----LGLWLLMGFSFQTLSLLYTTSGKSGFLTGLSVAMIPILSFF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
L R L ++ L ++ L + + A F + +
Sbjct: 116 ILGLRPRPNAWAGVALSVMGLYLLALADFSRINQGDLLAMLCAVGFGLQVVYTSKYAPRA 175
Query: 196 --------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ V ++ F +H + L+ +
Sbjct: 176 GALPLVTVQVTLVTVASLVLSFLFEPWNLLLRKHPWAEPGVWMAVLVTALFATVLAYVGQ 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+Y + + V ++ P+ ++ L + ++ + M++ LP
Sbjct: 236 TYFQRETSPNRVALIFAMEPVFAALTDYVWLGVSMTGWGLTGGALIFVGMILSELPGKHL 295
Query: 308 SGKN 311
+
Sbjct: 296 INRK 299
>gi|332308201|ref|YP_004436052.1| hypothetical protein Glaag_3857 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175530|gb|AEE24784.1| protein of unknown function DUF6 transmembrane [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 300
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 94/297 (31%), Gaps = 16/297 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +WG + ++T+ + + +I+ R + + + + L +
Sbjct: 6 FLELVLLASIWGASFIFTRTATPEFGPISLITLRAGLASLILLPFVCNRAAIRQLTQHWR 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
L Y+LL S P+ +G ++LK+RL+
Sbjct: 66 GILVVGLTNTAIPFCLFS------YSLLHIGAGYASVMNATAPMFGALIGWLWLKQRLSG 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFF 197
L ++ L+ + + +++ +L+I A Y + +
Sbjct: 120 LAVLGLLIGFMGVSVLSTAQAAAFDTLSILPTLATLVATALYGYAGCFTKQYLSDVKPMA 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + V N + + + L + + ++ I S
Sbjct: 180 LAAGSLFAATICLVPLNIWFMPDT-LPSAKSWGDAIALGVLCTALAYLMYFRLIASVGPS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P I+ + +L + + + +V+ +++ + K + K
Sbjct: 239 NALTVAYLIPAFGIMWGIILLNETFTPLMWLGVILVICGVLLVTGVVKSLADKRRLK 295
>gi|311030630|ref|ZP_07708720.1| transporter [Bacillus sp. m3-13]
Length = 291
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 92/279 (32%), Gaps = 10/279 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L + + + I ++ + + + V E++ R +F
Sbjct: 3 KGILLAIASSLTFSIMNVFVKAASETIPVSEIVFFRSFIGAFLIFLLT--------RKTK 54
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ K V MLV + A++ + + + S ++P ++ L FLKE++
Sbjct: 55 VAFSKKGVPMLVLRGALGALYLLAYFFTIAHIPLGDASILAHLSPFFAIMLSGYFLKEKM 114
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA-IAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
N ++ L I+ +++ ++ + +SA+ A + + +
Sbjct: 115 NRNMVMLFPLFIVGAILLINPFSYDSYTVYALVGVFSAFLAACAATSIRYLSTRHHKYEI 174
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + F +L+ G+++ + + + V ++
Sbjct: 175 VFYFLASGALVSLPLMWNEFVWPTPLGWFYLLCIGVVSLIGQLVLTSAFTHENIMVVEVV 234
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y ++ + + + +++ A +
Sbjct: 235 RYIGIFFNVMWGFVFWGETLGVFSFVGGALIIGASIALS 273
>gi|308447374|ref|XP_003087415.1| hypothetical protein CRE_14454 [Caenorhabditis remanei]
gi|308256658|gb|EFP00611.1| hypothetical protein CRE_14454 [Caenorhabditis remanei]
Length = 304
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 87/291 (29%), Gaps = 13/291 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S P A ++W + T+++ +S + + +R L + + ++
Sbjct: 3 SNSKPMWWAISLPIIAVLIWSMNIAVTRYVSDYISPVSISFYRWLVAFIILTPFML---- 58
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L + +V SA + ++ G A PV ++F+
Sbjct: 59 PQVWKQRHLVKQHFMQFVVLSAFGMFLYQGLAYSAAHYTTATNMGIINAFIPVFTIFVSI 118
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP------- 189
+ L+E N ++ ++L L LL + L+ +
Sbjct: 119 LILREIPNRFAVVGSILSFLGLLYVIGRGDFSNLTQLAGHSGDLIMVLAVFFYAFYGVFL 178
Query: 190 -VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + I + L L + ++
Sbjct: 179 KKWQLKVPLLLSLYVQIALTLVYHLPFVLYYGIDAINQGNVASVLYAGILPSLVAPLLWM 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + I P+ + + F L + TI ++++ + +
Sbjct: 239 MAVQYLGPNRTSIFMNLMPVFTAIIAYFWLHEAWTMSHTIGGIVILVGIAL 289
>gi|284166396|ref|YP_003404675.1| hypothetical protein Htur_3137 [Haloterrigena turkmenica DSM 5511]
gi|284016051|gb|ADB62002.1| protein of unknown function DUF6 transmembrane [Haloterrigena
turkmenica DSM 5511]
Length = 331
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/299 (10%), Positives = 78/299 (26%), Gaps = 14/299 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F + + +G T + + LE L ++ R + + + + L+
Sbjct: 7 LAFFVLSSVFFGGTFVAAKAGLEYFPPLLFVAIRFDVAALVMLGYV-ALTVSGDDLRPET 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + I + F+ + VF + ERL+
Sbjct: 66 RGDVVGILATGGLVIGLANALLFVGQQYATSAVGAIVFSLNPILTPVFAAVLLSDERLSR 125
Query: 146 LQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ L +L + ++ G + I S
Sbjct: 126 RGAVGMGLGLLGVALVVSPDPAALLGGDAFGRAILFAGAICAALGAVLIRRAGSTATLSS 185
Query: 200 MCVLAIPA------LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+A ++ + + + ++
Sbjct: 186 TVRIAWGLPIAAALCHGFAYSTGESMASISWTTDALLALGYVSIVAGVLAYIAYFGLLEA 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ +T ++ Y P++ + IL + + T + F + V +V +++
Sbjct: 246 TEATTANLIFYVVPVVSTLGGWAILDEAVATSAVVGFLTIFAGFAVIGSDSVDIDLRSR 304
>gi|262274221|ref|ZP_06052033.1| protein of unknown function DUF6 transmembrane [Grimontia hollisae
CIP 101886]
gi|262222031|gb|EEY73344.1| protein of unknown function DUF6 transmembrane [Grimontia hollisae
CIP 101886]
Length = 305
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 82/292 (28%), Gaps = 7/292 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T + L A + W + + E + + + R + + ++ L
Sbjct: 9 TWLPILLAVIATMSWAGNITLAKLVNESIPPIGLAFWRWTIASLVLAPFVIGPMQQQFSL 68
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS----FSYFVTPVISVFLGSV 137
+ L A + + L T L S V V+ +
Sbjct: 69 FRQHWRLVLLLALFGVAGYNTLVYIALEDTLSTNVVILQSSSPLMILLVQFVLFRQFTTF 128
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ I L+I L + G L A+ A + +G
Sbjct: 129 KQTFAICVSAIGVLLIITKGQLAIGFAIGQSELIALFAILVWATYSVLVQTLPPALKGLP 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNI--PDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + L + + + L + F ++ ++R
Sbjct: 189 MLGYTVFLGNLMLLPVYLAESLWIETMPVTRESIAISLYTGIFASGIAFFCWNAAVQRMG 248
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+T G + P+ ++ S+ +L + + + +V +++ L
Sbjct: 249 AATTGQFMHLIPVFGLIFSMLLLGEKLQGYHWLGMAFIVAGILIANLSRAQK 300
>gi|94984378|ref|YP_603742.1| hypothetical protein Dgeo_0270 [Deinococcus geothermalis DSM 11300]
gi|94554659|gb|ABF44573.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Deinococcus geothermalis DSM 11300]
Length = 309
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/284 (9%), Positives = 76/284 (26%), Gaps = 20/284 (7%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G A + + ++ + + V++ R + L L
Sbjct: 29 RAGLGLALVAALGFSTLGIWGKLAGRVGLDSFSVLAWRFG-----------LVALALLPL 77
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L+ + A+ + AL T ++ P + + +
Sbjct: 78 AGRELTWRQRRPLLGVGLLYALATTCYFGALSRITAGATGLLLYLAPAFVILFAWLLGRR 137
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK------TIPVGSSEG 195
+ ++ A L L L ++ G + +
Sbjct: 138 -PDAAKLGAVALAALGLGLVVGIPGAGDRDPLGLGLGAGAGALYAAYLLASERWLSGVPP 196
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L++ +G H + + L ++R
Sbjct: 197 LASTGHMALVAGLYFAALAAGTGTLHVPTTAAQWGVIVGMAALATLVAVPALYGAVERLG 256
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ PL ++ + IL +P+ + +++ V+
Sbjct: 257 AARASLIGTLEPLFTVLLTFLILAEPLRPAVLLGGALILAGAVL 300
>gi|319775904|ref|YP_004138392.1| hypothetical protein HICON_12490 [Haemophilus influenzae F3047]
gi|319896561|ref|YP_004134754.1| hypothetical protein HIBPF01620 [Haemophilus influenzae F3031]
gi|317432063|emb|CBY80412.1| conserved hypothetical protein [Haemophilus influenzae F3031]
gi|317450495|emb|CBY86712.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 296
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/293 (20%), Positives = 120/293 (40%), Gaps = 5/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L + L+GI L++ +L+ +S +V + RVL + G+F + G SLL
Sbjct: 5 IQGVLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRVLTMIFGLFLILFPTIGCRSLLSL 64
Query: 84 TL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K+ + + + F++A L +G + YF+ P+I LG +L
Sbjct: 65 ITTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWL 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KERL+ +Q IA LL + H+ ++ V + + I
Sbjct: 125 KERLSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCMVYPFYYLSRKLMKIPALQGIT 183
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ I ++ S L L G++++ ++ +S
Sbjct: 184 LDIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIF 243
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + V+N K +
Sbjct: 244 AVLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGVLNKNKVR 296
>gi|167748489|ref|ZP_02420616.1| hypothetical protein ANACAC_03233 [Anaerostipes caccae DSM 14662]
gi|167652481|gb|EDR96610.1| hypothetical protein ANACAC_03233 [Anaerostipes caccae DSM 14662]
Length = 305
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 89/291 (30%), Gaps = 19/291 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G LF LWG T + T+ L Q +E++ R L +
Sbjct: 4 KKYIQGHLFALATIFLWGTTFISTKILLRQFQPIEILFFRFLLGFLVLILIY-------P 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T + + + +++ F AL ++P + L V
Sbjct: 57 KRLKTEGWREEKYFMAAGLCGITLYYLFENIALTYTMASNVGVIISISPFFTALLARVVT 116
Query: 140 -KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTI 188
++ L + LL + + +++ LS + +S +
Sbjct: 117 GEKSLGRRFFLGFLLAMCGICLISFGGTALHLSPKGDFLAVLAAFVWAAYSMLTKKIGSF 176
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + +++ S G F + L ++ F ++
Sbjct: 177 GHNIIQSTRRCFAWGLLFMAPVLLFTDISLGRQRFADPLNLGNLLFLGIGASAICFVTWN 236
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+KR + Y P++ I++SV IL + + + + + +
Sbjct: 237 TAVKRLGAVKTTVYIYMVPVVTIITSVLILGEKLTVRAACGAFLTIAGLFL 287
>gi|114761449|ref|ZP_01441364.1| hypothetical protein 1100011001310_R2601_03963 [Pelagibaca
bermudensis HTCC2601]
gi|114545697|gb|EAU48699.1| hypothetical protein R2601_03963 [Roseovarius sp. HTCC2601]
Length = 294
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 83/280 (29%), Gaps = 16/280 (5%)
Query: 39 ITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSA 98
+ + ++ V + EV+ R +S+ + ++ + + V
Sbjct: 6 LMLTLVKLIDDVPLGEVMFFRCFFSILPIAGLLILRGELTAAFRTR-----RFVGHVTRT 60
Query: 99 TILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL 158
+ G ++ T + P+ V ++FL+E + + A +
Sbjct: 61 CLGLTMMGLTFVSVQALPLPETVTLQYTQPLFVVAFSALFLREAVGVNRWGAVAFGFAGV 120
Query: 159 LIMTLHSGIPL-----------LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
L++T + L L A +A A + V + A
Sbjct: 121 LVITWPNLSMLTSGSAELTTRELIGIAAALIAAAGVAVVFLLVRGLVKTEKPTTITAYFW 180
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L S + + T LI G+L F + ++ A S EYT+
Sbjct: 181 LISSSLLALSAFGGWEPLTLEQTALLIACGILGGFGQLCMALSLQAAPASVTASFEYTSL 240
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
L I FI +V+ A + L
Sbjct: 241 LFAIGLGYFIFGDIPGINTLFGGAMVIAAGLFILWRESRA 280
>gi|92112175|ref|YP_572103.1| hypothetical protein Csal_0039 [Chromohalobacter salexigens DSM
3043]
gi|91795265|gb|ABE57404.1| protein of unknown function DUF6, transmembrane [Chromohalobacter
salexigens DSM 3043]
Length = 290
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 89/286 (31%), Gaps = 14/286 (4%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
V A WG++ L + V +R L V + L
Sbjct: 6 ALVVLASFCWGLSGGIGGMLMADDWDAFVVSFYRGAIGLVFVLGWLAIRPRHSGL----- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
NP+ G + +A ++ F+ ++ + + + P+ L V E+
Sbjct: 61 SNPRLWGWSAVAGLGVAGNFAFYFLSISQGSVAVAATLMYSAPIFVYLLSFVLKLEKPTP 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIA-------VTWSAYCFARKTIPVGSSEGFFI 198
L+ A +++L ++++T + + + S F
Sbjct: 121 LKWTAIAVVMLGIVLLTRIYDVGAGGITLLGVGAGLLAGVSYAVFIFGFKYAAPHGSPQA 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + G + L LF+ L F + G+ +
Sbjct: 181 ILVIAFAVLAVLLAGLGDTSQTLDVLHTPDWPLFITLGILGAGLSFIFYVNGLHHTAPAV 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ P+ + V +L + + +++ + +++ + + +
Sbjct: 241 ASIVAMVEPVTASLFGVVVLGESLVSIQIVGMVLILATVTALSVYS 286
>gi|300117385|ref|ZP_07055175.1| transporter, EamA family protein [Bacillus cereus SJ1]
gi|298725220|gb|EFI65872.1| transporter, EamA family protein [Bacillus cereus SJ1]
Length = 301
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 62 KQHIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 118 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 178 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 296
>gi|289423993|ref|ZP_06425782.1| integral membrane protein [Peptostreptococcus anaerobius 653-L]
gi|289155568|gb|EFD04244.1| integral membrane protein [Peptostreptococcus anaerobius 653-L]
Length = 305
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/302 (9%), Positives = 101/302 (33%), Gaps = 10/302 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY--- 73
+ G + A ++WG+ ++ + +E + R L + +
Sbjct: 4 QKRKEAISGLMLGVTA-LVWGVAFIFQRTGMEHIGPYAFNFFRCLVCVIFLMLVSYISDM 62
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
++ K+ + + +L + +++ F + VI
Sbjct: 63 RFKRKNIKVGGFKDKAIFKGGILAGVVLFLAMSSQQVGMVSTTASKAGFITTMYIVIVPL 122
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL----LSLAIAVTWSAYCFARKTIP 189
LG + ++ ++ ++ L + L ++++ SG + + ++ + + I
Sbjct: 123 LGVFYGRK-VSPKIVVCVALAAVGLYLLSIKSGFTISRGDFFVFVSAIFYSLQIVVIDIF 181
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + +V + T L + + F +
Sbjct: 182 APGVDSIKLSLVEFITAGILSLVAMLVLETVTMESVMLASTAILYTGLMSSGIGFTLQIV 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K + + ++ + ++ +++ + +L + + + I+V+A+++ + +
Sbjct: 242 AQKNLQPTIASLLMSSESVVSLLAGIVLLGESLTSREFSGCFILVVAILLAQIDFPVKKI 301
Query: 310 KN 311
K
Sbjct: 302 KK 303
>gi|271962139|ref|YP_003336335.1| DMT superfamily drug/metabolite efflux pump [Streptosporangium
roseum DSM 43021]
gi|270505314|gb|ACZ83592.1| DMT superfamily drug/metabolite efflux pump [Streptosporangium
roseum DSM 43021]
Length = 311
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/279 (12%), Positives = 72/279 (25%), Gaps = 17/279 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+WG + + L L ++ R + I
Sbjct: 6 LFLAIGLAAVWGFNFVVMEVGLRHFPPLLYVALRFTLAAFPAVLFI-----------GGP 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P + + + + + LTS V V +V L LKER+
Sbjct: 55 RVPWRWVLTAGATLGVTQYGLLLLGMRAGMPAGLTSLVVQVQAVFTVILAVTLLKERITT 114
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLS-----LAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
++ + L ++ L G + A F+
Sbjct: 115 RRVAGMGIAFAGLALIALDLGNGGPIGAFVLVVGAALGWGAGNIAVRKAAPPDSLRFMVW 174
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ G L + F ++ + +KR S V
Sbjct: 175 LSAVAAVPMLGLSLLVEGVPRLEFSTEGTLSVLYVALISTLGGFGVWGFLLKRYDASVVA 234
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + S+ +P+ V+ +++ ++
Sbjct: 235 PYSLLVPVFGMSSAALFTGEPVSPVKLAAAALIISGVLF 273
>gi|197119257|ref|YP_002139684.1| membrane protein [Geobacter bemidjiensis Bem]
gi|197088617|gb|ACH39888.1| membrane protein, putative [Geobacter bemidjiensis Bem]
Length = 325
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 21/288 (7%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV---SVLEVISHRVLWSLPGVFFAI 71
S A + G L + A +LWG + T+ + + + L + R+++SLP +F
Sbjct: 3 SINAARAESRRGLLLIMLAAVLWGTVGISTKTIYHLASTNPLSIGFFRLVFSLPVLFSIC 62
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
G + M + +F T T + PV+
Sbjct: 63 WARQG---KEMLHVSRGDLGLMTLIGLMTALYQVCYFGAVARTGVAVATVVTLCTAPVMV 119
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS---------------GIPLLSLAIAV 176
+ F ++R + ++A + + ++ L G +A+A+
Sbjct: 120 AVITVAFTRKRPSRSTLVALVGALSGTAVLVLFQDRGLAPQGACPLRLTGADTGGIALAM 179
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
+ I + + ++ V GF+ + L +
Sbjct: 180 VSAFSYGLVTLISQKLAAHRDPFQSLAISFSVGAAVLFGFAKDMVMTYTPLAWVLLVYLG 239
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
+ + + +F G++ + I P++ + + F+ +
Sbjct: 240 TIPTALAYVLFFKGMRSTSATAASISTLLEPMVATMLAWFLFGERFTP 287
>gi|86139484|ref|ZP_01058052.1| putative membrane protein [Roseobacter sp. MED193]
gi|85823667|gb|EAQ43874.1| putative membrane protein [Roseobacter sp. MED193]
Length = 308
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 92/302 (30%), Gaps = 19/302 (6%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIV 72
++ ++P + V A + +G+ P +++ L + ++ V +R + + + +
Sbjct: 6 TQSRPAIPYALAIAGVLFASVCFGLVPYFSRGLTEQGIAPYAVAFYRYIVAAILLLPVLF 65
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S + + + ++ + W ++ AL T Y PV ++
Sbjct: 66 KHRQAWSEIS----------WGLSAGAVMGLGWIGYVMALETLPASTVGVLYMTYPVFTL 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA-------VTWSAYCFAR 185
+ F + ++A+ LI ++ +I + +PL + + +
Sbjct: 116 VIAWAFFSDAPTKRALLASGLITVAAIIAGSPASVPLQHIPMLLLSLAAPFGFGFGICVL 175
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I L + G E G L + +
Sbjct: 176 VHRLSRIPPLARIASVSLGSVLGLLPLMAGADIAELLPAGQSDWVLIVGIGLITALVPQL 235
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++ S ++ M V + I + + +V+ A+ +
Sbjct: 236 VYTICSPLIGASQTAVVGSIELPTMFAVGVIAFDEVITMHQAVACALVLGAIAITRSRKT 295
Query: 306 IN 307
Sbjct: 296 RT 297
>gi|284030738|ref|YP_003380669.1| hypothetical protein Kfla_2805 [Kribbella flavida DSM 17836]
gi|283810031|gb|ADB31870.1| protein of unknown function DUF6 transmembrane [Kribbella flavida
DSM 17836]
Length = 338
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/300 (13%), Positives = 91/300 (30%), Gaps = 20/300 (6%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+A+ +G F + I +G + + + L +S + R+L + + ++ F
Sbjct: 5 HDAARTKSIGLTFAVFSAITFGGSGPFAKALIGAGISPQQAAWLRILGAAALLVPLVLIF 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G L ++++ T +A F A + F PV+ V
Sbjct: 65 RGTTGLRAVRTSWRP---LVLYGVTGIAGCQTLFFVAASRLPVGVAILLEFTGPVLVVGW 121
Query: 135 GSVFLKERLNHLQIIAALLIILSL--LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
K + ++ ++ ++ L ++ L +A +A C A I +
Sbjct: 122 LKFGRKVAVPKAAVLGVVIALVGLATVVEIWSGVQLDLIGLLAGLGAAACQATYFILIDQ 181
Query: 193 SEGFFIEMCVLAIP-------------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
G + + A +
Sbjct: 182 LAGVADPLVMTAAGSVVGAVVLTAVSAPWGIPWHALTDTIAIGERSAPGWVFAAWLIVVS 241
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++R + G + Y + + + +L + + T + I IV++ V
Sbjct: 242 TVVAYLAGAAAVQRLSAAIGGAVAYVEVVAASLFAWILLNETLRTNQVIGGAIVLLGAFV 301
>gi|228963928|ref|ZP_04125063.1| Transporter, EamA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229042697|ref|ZP_04190437.1| Transporter, EamA [Bacillus cereus AH676]
gi|229126258|ref|ZP_04255276.1| Transporter, EamA [Bacillus cereus BDRD-Cer4]
gi|229143551|ref|ZP_04271976.1| Transporter, EamA [Bacillus cereus BDRD-ST24]
gi|228639907|gb|EEK96312.1| Transporter, EamA [Bacillus cereus BDRD-ST24]
gi|228657250|gb|EEL13070.1| Transporter, EamA [Bacillus cereus BDRD-Cer4]
gi|228726637|gb|EEL77854.1| Transporter, EamA [Bacillus cereus AH676]
gi|228795779|gb|EEM43252.1| Transporter, EamA [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 320
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 37.2 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|225619251|ref|YP_002720477.1| drug/metabolite transporter permease [Brachyspira hyodysenteriae
WA1]
gi|225214070|gb|ACN82804.1| permease of the drug/metabolite transporter (DMT) [Brachyspira
hyodysenteriae WA1]
Length = 291
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 94/297 (31%), Gaps = 15/297 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +GT+ +F ++WG + + + + ++ ++ R +
Sbjct: 1 MANKERLGTIGIFLTALIWGYSFVAVKVVVREIEPFYLVGIRNFAGGIFLSLVFF----- 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + K + + + L + + + +F + F +
Sbjct: 56 ---KRMKNISKKDIILSIPVGIALFLGFFLQTMSSKFITASKVAFFTGSYVIFIPFFSWI 112
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVG 191
K+ + IAA++ +L L +++ G + + AV ++ + +
Sbjct: 113 VYKKSPHISAFIAAVITVLGLYLLSSFDGFSGIEIGDLFALICAVVFAVHLMLIDKMLEY 172
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ ++ + V S +F + + + + + +
Sbjct: 173 VDGVIMAALQLIIAGIVSLSVGVVTSTPFNFNVSSEAIYSLIYLAIGATGIAYLLQTVSQ 232
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K S GI+ L + V +K P+ I ++ A+ + + + +
Sbjct: 233 KYVNPSKAGIILSLESFLGALGGVIFMKDPVTINFVIGGACMIAAVFICEIGSSVKK 289
>gi|182679151|ref|YP_001833297.1| hypothetical protein Bind_2188 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635034|gb|ACB95808.1| protein of unknown function DUF6 transmembrane [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 349
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/289 (8%), Positives = 88/289 (30%), Gaps = 3/289 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV-YFSGGLSLLKD 83
G + +L+G + + + L + + L + G+ L ++
Sbjct: 5 GIPLALLSAVLFGASTPFAKLLLGSIDPWIMAGVLYLGAGLGLSAVHFSRTLLQLPAVEA 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L+ + + T + ++ L S + + ++ + V +E +
Sbjct: 65 PLRRSDLPWLTLVILTGGLLGPLLLMFGLAHTDAAAASLLLNLEGLATMGIAWVVFRENV 124
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF-IEMCV 202
+ ++ A I+ ++++ A + + C+ +++ +
Sbjct: 125 DRRLLLGAFAILAGAVVLSWKGHASFQWSAFLIAGACLCWGIDNNLTRKLSSADPVQIAM 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + + +F + ++ + G
Sbjct: 185 IKGLVAGAINLLIATINGASLPSPTVFLFAGVIGFFGYGVSLTLFVFALRYLGAARTGAY 244
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
AP + V ++ +L + + I ++ + ++L + ++
Sbjct: 245 FSLAPFVGAVLAIAMLGETLSIQLLISGCLMGFGLWLHLSERHDHEHRH 293
Score = 36.0 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 44/189 (23%), Gaps = 6/189 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A + WGI T+ L +++ + L + L L
Sbjct: 155 FLIAGACLCWGIDNNLTRKLSSADPVQIAMIKGLVAGAINLLIATINGASLPSPTVFLFA 214
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ L V AL T + + P + L L E L+
Sbjct: 215 GVIGFFGYGVSLTLFVF------ALRYLGAARTGAYFSLAPFVGAVLAIAMLGETLSIQL 268
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+I+ L+ L + I + E
Sbjct: 269 LISGCLMGFGLWLHLSERHDHEHRHDIMEHEHRHSHDEHHQHDHGPTILPGEPHTHWHRH 328
Query: 208 LFYVVWNGF 216
V +
Sbjct: 329 TPLVHRHPH 337
>gi|209547430|ref|YP_002279348.1| hypothetical protein Rleg2_5428 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538674|gb|ACI58608.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 305
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 88/289 (30%), Gaps = 8/289 (2%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAI 71
+ NA M G + + +L+ + ++L ++ +V+ R + S + I
Sbjct: 4 KAAAANAGNLIMTGVVLMLLGDLLFALNDAMGKWLLTNFALGQVLVIRSVGSFIVLGPMI 63
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + + + L A+ Y P+
Sbjct: 64 ARQGPMALFRVEQKRLQFIRVFMATADVALF------YAAVAYLPLADVMTFYMAGPIYI 117
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
L FL E++ + +A L+ ++I S L ++ + FA +
Sbjct: 118 AALSHFFLGEKIGWRRWLAVLVGFAGVVIALRPSTAMLSLPSLFGLAGSLAFALSLVMSR 177
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
V S G + + L+ ++ + + + +
Sbjct: 178 YLRSTSDTTLVTWQTIAALATGIVLSIGHWQPATLVNWSGMLLLG-VVATCAHLLITRSL 236
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
K A S + M+YT L IV + D + I+V A +
Sbjct: 237 KLAPASLLAPMQYTLLLWAIVLGYILFNDIPDMQIIVGAAIIVFAGLFI 285
>gi|150004517|ref|YP_001299261.1| hypothetical protein BVU_1967 [Bacteroides vulgatus ATCC 8482]
gi|149932941|gb|ABR39639.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 308
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 92/304 (30%), Gaps = 20/304 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ G L + A I+WG+ + +S L + + R+ + A ++
Sbjct: 1 MAIQKYKGHLALLGAAIMWGLMSPIGKTALENGISGLSLATFRMTGGAICFWIASIFAPK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +K + + + ++ G F + L S P+ ++ + +
Sbjct: 61 ------EQVKPHDLMMLFFAGLLGIVLNQGCFTFGLSLTSPIDASIVTTTAPIATMIVAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFA 184
++LKE + ++I L + L + L S G L LA
Sbjct: 115 IYLKEPVTGKKVIGIFLGSIGALTLILSSQGSTDGKGGSIPGDLLCLLAQISFSFYLAIF 174
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ I + M A ++ S + T +
Sbjct: 175 KGLISRYNIFTLMKWMFTYAAICFIPFSYHEVSTIHFHEISTSTWTCVAYVIVGGTFLAY 234
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G K + + + + Y P++ S+ + + I +V + +
Sbjct: 235 ILMMIGQKTLRPTVISMYNYVQPIVGTSVSILLGMGTFGVAKGIAVALVFTGVYIVTQSK 294
Query: 305 VINS 308
Sbjct: 295 SREQ 298
>gi|295133550|ref|YP_003584226.1| integral hypothetical protein [Zunongwangia profunda SM-A87]
gi|294981565|gb|ADF52030.1| integral membrane protein [Zunongwangia profunda SM-A87]
Length = 288
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 78/276 (28%), Gaps = 3/276 (1%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A ++ + +++ +S +I R ++ + L+ +
Sbjct: 16 LAVVIISTSGTLGRYI-DLSPFLIIFLRSFIAVWALLIFCKLKGFKLNFENNNDLLKVLF 74
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ A L + ++ + + Y V + +L+ L +
Sbjct: 75 AGFLMCAHWLTYFQALKLSSVAIGMLSIYT--YPVITTFLEPIIRKTGFNKLHLLLGVLV 132
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
LL + L+ +++ V + R + + + + +L +
Sbjct: 133 LLGVYFLVPEFSLDNQQTIAVCFGVGSAFLYSLRNILMKQQASTYNGSVLMLYQMFVVSG 192
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ + LI S + K +T I+ P+ I
Sbjct: 193 LLLPVLFFFDLSVIPSQLAPVLILGLFTTSVGHTLLVSSFKYFSATTASIISSAQPIYGI 252
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V FIL + I ++ A+ + +
Sbjct: 253 VLGYFILNEIPSANTMIGGVLIAAAVFTEIFRSFKK 288
>gi|296130297|ref|YP_003637547.1| protein of unknown function DUF6 transmembrane [Cellulomonas
flavigena DSM 20109]
gi|296022112|gb|ADG75348.1| protein of unknown function DUF6 transmembrane [Cellulomonas
flavigena DSM 20109]
Length = 330
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 79/266 (29%), Gaps = 10/266 (3%)
Query: 31 FCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
A ++WG + L+ + LE +S +V R+L + ++ + T +
Sbjct: 12 LAAALVWGSSFLFMKVALEGLSSPQVALSRLLLGASTLVVVMLVARRPWPRDRRTWGHLT 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+G+L+ L W A F + ++V L L +
Sbjct: 72 VLGVLLCVVPYLLFAWSGQYLASGLSSIFNATTPLMTAAAVAVLLPVERLAPVQRLGLAV 131
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSA---------YCFARKTIPVGSSEGFFIEM 200
A+ +++ + + + AV + R+ + +
Sbjct: 132 GAVGVVVVVGPWAYVAEAATAAPLPAVLACLGATACYGLGTTYQRRFVVPLRLPPETVAA 191
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A+ + + L L L + + I
Sbjct: 192 GQVSAGAVLLTLTSPLVATGPVQLTWPVVLSMLGLGALGTGLAYAWMARIIDAWGPQRAS 251
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVR 286
+ Y PL+ ++ + +L + +
Sbjct: 252 TVTYLTPLVGVLLGIVVLGEQLHWYE 277
>gi|220911390|ref|YP_002486699.1| hypothetical protein Achl_0612 [Arthrobacter chlorophenolicus A6]
gi|219858268|gb|ACL38610.1| protein of unknown function DUF6 transmembrane [Arthrobacter
chlorophenolicus A6]
Length = 340
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 80/289 (27%), Gaps = 17/289 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + +LW + + + S + R+ + + +
Sbjct: 23 LGIAAMAVTVVLWASAFVGIRAIGPHFSPGSLTLGRLAIAAVV---LAAVALPKILKTRL 79
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +L + + A ++ V P++ + +FLKE
Sbjct: 80 MPRGREWWPILAYGVMWFGGYNVALNAAEHVLDAGTSALLINVNPILVAIMAGIFLKEGF 139
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA-------------YCFARKTIPV 190
+I + + + ++ L SG P T A + +
Sbjct: 140 PRWLLIGSTIAFAGVALIALGSGAPGQPGESTTTDMAGVLLCLLAAVLAAVSVIIQKPVL 199
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + AL + + G E + + F ++Y
Sbjct: 200 RKFPAAQATWFGILVGALCCLPFAGQLVSEVQAAPPAATAGLVYLGIFPTAIAFTTWAYA 259
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + Y P ++ S +L + + + ++ + +
Sbjct: 260 LSLVDAGKLAATTYLVPGTTVLISWLLLGEIPTAWGLVGGLVCLVGVSL 308
>gi|170748578|ref|YP_001754838.1| transporter DMT superfamily protein [Methylobacterium radiotolerans
JCM 2831]
gi|170655100|gb|ACB24155.1| RarD protein, DMT superfamily transporter [Methylobacterium
radiotolerans JCM 2831]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 75/284 (26%), Positives = 139/284 (48%), Gaps = 7/284 (2%)
Query: 25 MGTLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG ++ AY+ WG+ P++ + L S ++S R++WS + + L
Sbjct: 1 MGLVYALAAYLSWGLLVPVHFRMLGAYSPYHILSERIVWSSVFAGALALILA-ARHRLNL 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L K +L+ SA ++ V+W ++YA+ S Y++ P++SV LG V L ERL
Sbjct: 60 PLPLRKRHALLLLSAGMIGVNWLLYLYAVSGGHLLDASLGYYINPLVSVALGRVVLGERL 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q +A + + + + +G PL+SL++AV+++ Y ARK + V + GF E +
Sbjct: 120 RPAQAVAIGIAATGVAVAVVWAGELPLMSLSLAVSFALYGLARKIVGVDALVGFLAETLL 179
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL E F D L+ GL + F+ R +L+T+G++
Sbjct: 180 LLPAAL----VWLVLSPEPFLPAAPGDRALLMLTGLTTALPLIWFAAAAVRLRLTTLGLL 235
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+Y AP ++V SV + + ++ R ++ ++ +A+ +Y + +
Sbjct: 236 QYVAPTCLLVLSVLVYGERVEPHRALMLALIWVALALYTIDALR 279
>gi|160884839|ref|ZP_02065842.1| hypothetical protein BACOVA_02829 [Bacteroides ovatus ATCC 8483]
gi|156109874|gb|EDO11619.1| hypothetical protein BACOVA_02829 [Bacteroides ovatus ATCC 8483]
Length = 291
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 95/284 (33%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R L + G++ T
Sbjct: 10 LIAILVVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVI-------SPKRLFTS 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q +F P+++ L + E+
Sbjct: 63 NWKDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKAT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I ++L ++ + ++ + L + + + + T +
Sbjct: 123 KGLIYGSILALIGVGLVVFNGSFVLKLSPVGDLLTLLAALSWAFYSLVIKKMTGRYPTVF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + L + + L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFLLHPLQPDFDVLLKPVVLSNLLFLAVLASLVCYVLWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y PL+ +V+SV IL + I + + G ++ +
Sbjct: 243 GTVRASNYIYLNPLVTMVASVIILHEKITWITLLGAGCIIFGVY 286
Score = 35.7 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 1/139 (0%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
L + + + + V + G + + Y+ S F
Sbjct: 5 HGYYHLIAILVVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVISPKRLFTSNW 64
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK-QPIDTV 285
+ + G S F + + + S V + TAPLL + S+ K +
Sbjct: 65 KDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKATKG 124
Query: 286 RTIVFGIVVIAMVVYLLPT 304
+ +I + + +
Sbjct: 125 LIYGSILALIGVGLVVFNG 143
>gi|126640636|ref|YP_001083620.1| hypothetical protein A1S_0565 [Acinetobacter baumannii ATCC 17978]
gi|126386520|gb|ABO11018.1| putative membrane protein [Acinetobacter baumannii ATCC 17978]
Length = 308
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 89/300 (29%), Gaps = 22/300 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLE----VISHRVLWSLPGVFFAIVYFSGGLSL 80
+G+ F C+ L+ ++ + +S L +++ R+L +LP +
Sbjct: 10 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDGTVLMALRMLSALPFFLLICWFNRHH--- 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+K + ++ L+ L F+ P ++V S+ K
Sbjct: 67 -NQGIKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIASSLLYK 125
Query: 141 ERLNHLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARK 186
++L+ + A L ++ L + S +
Sbjct: 126 QKLDVKSLFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSFVFASAVAFAGYLLLTPPLI 185
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ Y + L + + L+ +
Sbjct: 186 KKFGSWNFTGLALTVACIGTLTHYTLSTSHPFQLLLQLPSSVIWYGIGLGFLVTVLPTVM 245
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + + + ++ +++ L
Sbjct: 246 LMQSIERLGASQSAMIASIGPVLTILLAVAFLNEHLNIWQWVGCFLNIVGVMMITLRKKR 305
>gi|240145159|ref|ZP_04743760.1| putative integral membrane protein DUF6 [Roseburia intestinalis
L1-82]
gi|257202838|gb|EEV01123.1| putative integral membrane protein DUF6 [Roseburia intestinalis
L1-82]
gi|291537780|emb|CBL10891.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Roseburia intestinalis XB6B4]
Length = 284
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 86/289 (29%), Gaps = 12/289 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ ++ +M GT++V + + + + + + S + + R ++S + +V
Sbjct: 1 MQEKQLDKESMKGTIYVLLSAVCFSTGGVLIKSI-PWSSITIQGIRSIFSFMLIASYMVI 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ ++F A F+ A F P+ +
Sbjct: 60 TK----------RKFVWNKTVLFGAVCNTAMALTFVSATKMTTAANAIVLQFTEPIFVIL 109
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L K++ ++A ++ +L L S + + + +
Sbjct: 110 LMWALYKKKPKKAAVVACAVVFAGILCFFLDSLSAGGMAGNLLAVFSGFTYALVMMMKGF 169
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G E +LA + + S ++ + + S G+ R
Sbjct: 170 PGADFESSLLA-SHVISLSIGLPSFLGETDHSAKAWICIILLGVIQFGLSYIFLSRGLDR 228
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
T + P+L + + I I +V+ A Y +
Sbjct: 229 VSPVTASLTSTLEPILNPILVAIFCGETIGRTAVIGAVLVIGAAACYNV 277
>gi|16080975|ref|NP_391803.1| transporter [Bacillus subtilis subsp. subtilis str. 168]
gi|221316220|ref|ZP_03598025.1| hypothetical protein BsubsN3_21087 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|732393|sp|Q07835|YXXF_BACSU RecName: Full=Uncharacterized transporter yxxF
gi|603781|dbj|BAA06655.1| hypothetical protein [Bacillus subtilis]
gi|849028|dbj|BAA06259.1| hypothetical 34.3-kDa protein [Bacillus subtilis]
gi|2636470|emb|CAB15960.1| putative transporter [Bacillus subtilis subsp. subtilis str. 168]
Length = 311
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 97/292 (33%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S + + + +++G +++ + E++ R L + + F +
Sbjct: 8 SSKQKSTAVIKMVISMVIFGSIGFFSEH-TNLPSFELVFVRCLCATLFLGFCWLASGQYK 66
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + V + L +W F + + Y + PV+ + LGS F
Sbjct: 67 TEKW----SKRDVLQTLACGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSFF 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--- 195
+E+LN + + + ++ L +++ +G L+ + A + G
Sbjct: 123 YREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGSGIIWAVLAALFYAFTTLLGKGI 182
Query: 196 ---FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L ++ G L + + + V+ +F ++
Sbjct: 183 HNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDSLR 242
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ + P + IV D +T+ ++ M + L+
Sbjct: 243 FLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRR 294
>gi|295101138|emb|CBK98683.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Faecalibacterium prausnitzii L2-6]
Length = 307
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/299 (9%), Positives = 82/299 (27%), Gaps = 12/299 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF-------SGGLSL 80
L + +WG + + ++ R ++ + + F
Sbjct: 9 LMLMLCAFIWGTAFVAQSAGSGMGAYSFLAGRSWLAVLVLIPTVFAFDAVRKKQGQPYGW 68
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + +G + T L + + V+ V + +FL
Sbjct: 69 PKEKSERKTLLGAGLICGTFLFAASAAQQIGITIDPSTAKAAFLTAMYVVLVPVFGLFLG 128
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPL-----LSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + ++ ++ + L ++ + +G L ++ +G
Sbjct: 129 RKGSAQLWVSMVIAVAGLYMLCMKNGFGGIETSDWILLSCAVLFSFQIMSIDHFSPLVDG 188
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + A+ + + + + + G K
Sbjct: 189 VRLSLIQFIVVAVESSAAALIFETPTLAEYGANFLPVVYCGVMSSGAGYTLQILGQKELN 248
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ + + +L Q + + ++ A+V+ LP K+
Sbjct: 249 PAIASLIMCLESVFSALGGWLLLGQNLSMRESAGCALIFAAVVLSQLPLAELRRCKKSA 307
>gi|229108431|ref|ZP_04238048.1| Transporter, EamA [Bacillus cereus Rock1-15]
gi|228675058|gb|EEL30285.1| Transporter, EamA [Bacillus cereus Rock1-15]
Length = 320
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 33 WGGNFIVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 36.8 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|229171607|ref|ZP_04299182.1| Transporter, EamA [Bacillus cereus MM3]
gi|228611753|gb|EEK69000.1| Transporter, EamA [Bacillus cereus MM3]
Length = 320
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 92/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPIVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQ+++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQVLSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFSLLFSLHFNSGDLWMIAAVCIWGMYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFLTSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQVFGTMIVVTGCYLFS 302
Score = 35.7 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPIVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQVLSMILSFFGVILVLLKG 157
>gi|126736826|ref|ZP_01752561.1| hypothetical protein RSK20926_10364 [Roseobacter sp. SK209-2-6]
gi|126721411|gb|EBA18114.1| hypothetical protein RSK20926_10364 [Roseobacter sp. SK209-2-6]
Length = 306
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 90/295 (30%), Gaps = 5/295 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S + + +G L + A I++ + ++ L + V+ R + V F +
Sbjct: 13 SGKGQTNNVTLGILLMIGATIVFALQDGISRHLAGTYNTYMVVMVRYWFFAAFVVFLAMR 72
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
GG+ + + +F +L +Y + + P++
Sbjct: 73 APGGIRET----ARTDQLWLQIFRGVLLVGEICVAVYGFTILGLIESQAVFICYPLLVAA 128
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L L E++ + A + ++ ++I+ AI SA FA + +
Sbjct: 129 LSGPVLGEKVGWRRWAAIGVGLIGVMIILQPGVGVFDPAAIIPFVSALMFAVYGLITRYA 188
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ +V+ G + + D ++ + + +
Sbjct: 189 ARRDSTATSFFWTGVAGMVFMTAVGIWFWEPMSRGDWGWMALLCVSGVTGHWLLIKCYEV 248
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
A+ V Y + + V + + I I++ A + L
Sbjct: 249 AEAGAVQPFAYFHLIWAAILGVMVFGEVIRINVATGAAIIIAAGLFTLWRESRKR 303
>gi|118477132|ref|YP_894283.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|196046590|ref|ZP_03113814.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|225863551|ref|YP_002748929.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|229183883|ref|ZP_04311099.1| Transporter, EamA [Bacillus cereus BGSC 6E1]
gi|118416357|gb|ABK84776.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis str. Al Hakam]
gi|196022523|gb|EDX61206.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|225788116|gb|ACO28333.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|228599535|gb|EEK57139.1| Transporter, EamA [Bacillus cereus BGSC 6E1]
Length = 303
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|116252302|ref|YP_768140.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256950|emb|CAK08044.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 327
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/321 (11%), Positives = 99/321 (30%), Gaps = 19/321 (5%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWS 63
+ + ++ G + A ++ I +++ E +S +V +R
Sbjct: 2 ASSSQESAAMSEPHQNSLQGMAIMSGAMLILPIMDAIAKYMATFEAMSPGQVTFYRFFIQ 61
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
+ + G +L + + M + + F A+
Sbjct: 62 IACTLPILFALFGLKAL------SAQRPWMNLLRGVLHGGASLLFFVAVKYMPLADVFAI 115
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF 183
YFV P + L ++FL E++ + +A ++ +I+ S A+ A+ F
Sbjct: 116 YFVEPFMLAALSALFLGEKVGWRRWVAIVVGFGGAMIVIQPSYEIFGLKALLPVACAFLF 175
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS----------GGEHFFLGNIPDTLFL 233
+ + + + + + V+ + + + L
Sbjct: 176 SLYLFLNRAIGEADSPLTMQTMAGIGGTVFMAAALFLGNSSGNADFAVSLPSSSLGLVLL 235
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ G ++ + + + A LS + +Y + V + I I+
Sbjct: 236 LALGSISGYAHMLIVRAFRLAPLSLLAPFQYFEIISATVLGYAFFNDFPSFSKWIGIFII 295
Query: 294 VIAMVVYLLPTVINSGKNKTK 314
V + + + + + K+
Sbjct: 296 VASGLFIIWRERLQAQSLKSS 316
>gi|77462253|ref|YP_351757.1| RhaT family protein [Rhodobacter sphaeroides 2.4.1]
gi|77386671|gb|ABA77856.1| Possible transporter, RhaT family, DMT superfamily [Rhodobacter
sphaeroides 2.4.1]
Length = 308
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 88/296 (29%), Gaps = 7/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + A + + + + Q + + + I+ R L SLP +F G
Sbjct: 4 SDNLRGALAMTVAMAAFTVNDALMKAVTQTMPLFQAIALRGLVSLPLLFLYGWAVGGLRF 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + G+L A + ++ AL+ P+ ++ L
Sbjct: 64 RIP-----RRDGGLLALRAGADVLSTVAYLSALMVLPLANLVAILQSVPLAVTLAAALVL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-FFI 198
KE L + A L+ +L++ ++ + C + +
Sbjct: 119 KEPLGWRRFSAILIGFCGVLLIVRPGAEGFSLWSLVGLAAVGCIVARDLATRRIGSDLPA 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L ++ S F + +L G + + ++ ++
Sbjct: 179 ATIALWTSGAVTLLGLAGSLPSGFGPVTGGEAFYLGGAAVALMVGYLSIVLAMRGGDIAA 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V YTA L I + D + + F ++ + + +
Sbjct: 239 VSPFRYTALLWAIALGWLLFGDLPDGLALLGFAVITATGLFTIWREARLRRLPREA 294
>gi|319783850|ref|YP_004143326.1| hypothetical protein Mesci_4165 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169738|gb|ADV13276.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 293
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 97/281 (34%), Gaps = 7/281 (2%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ + + + + +++V +V+ R + + ++ G ++
Sbjct: 12 FWMALSIASFLGMTVAGRATTAELNVFQVLELRSVIGFFILLPLVMMSGGFQAMRTQRPV 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
A ++ ++ ++YAL + F TP+ + L +FL ERLN
Sbjct: 72 AHIARNVIHYTG------QAAWLYALTLIPLAVLISIEFTTPIWTAILAVIFLGERLNRP 125
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ A L ++ ++I+ + + V +A CF + V S + ++
Sbjct: 126 KLAAIALGLIGVVIIVRPGVGSVDPGHLVVLGAAACFGISVVTVKSLTRTDSVVRIICWM 185
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ V + + +++ + + A + V M++
Sbjct: 186 LIVQSVVGLIPALYTWRNPPLELWPWIVLIAFTGMSSHFCMARALGYADATIVSPMDFLR 245
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
L + + + ID ++++ ++ L I
Sbjct: 246 VPLSALIGWLLYSEQIDAFTAGGALLILMGNLLNLQRRQIK 286
>gi|307253845|ref|ZP_07535698.1| hypothetical protein appser9_1040 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258301|ref|ZP_07540043.1| hypothetical protein appser11_1050 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306863205|gb|EFM95146.1| hypothetical protein appser9_1040 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867640|gb|EFM99486.1| hypothetical protein appser11_1050 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 282
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 79/277 (28%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V IL+G + ++ +E S ++ RV+ +L + ++ L L
Sbjct: 3 KHTLALLKVHFTAILFGASGIFGALIES-SPDTLVLGRVMIALVCISLYFIWKKQPLVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ +A + + + SF FV + L
Sbjct: 62 THRELFSQILSGVLLTAHWVTFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+IA + ++ + L L V + + +
Sbjct: 120 YREGFLLIAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGILAIVNRKNMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSAKGLLNASALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTLTMLIGGAIILLSVA 276
>gi|300214589|gb|ADJ79005.1| Transporter, drug/metabolite exporter family [Lactobacillus
salivarius CECT 5713]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 95/285 (33%), Gaps = 12/285 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVS----VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + WGI+ ++ +F+ + + V R++ S + F +
Sbjct: 10 IMIIISCTFWGISGIFAKFIFNLDRSNTPIFVSQIRMIISGLVILFFSWLNKDKPMKIWK 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
T K+ + M I + A+ + + F+ P +F ++ ++
Sbjct: 70 TKKSSFTIIMFGLLGLIPV--QYCYFEAIKYGDASIATILQFIGPFFILFYLTIVKRQAP 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI----- 198
+++I ++ + + I+ H I L++ V + A I
Sbjct: 128 RRIEVICTIIAFIGVFILATHGNINHLAITPQVLFWGLLSAIGVATNTLIPKSLIHEFSP 187
Query: 199 -EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ L L + F +F+ ++ K +
Sbjct: 188 TAVTGWGLLIAGVGLFIIHPHVSASILAPQAIVPLLCVLVIGTIIPFQLFTSALRYVKAT 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
T +++ P+ + S+ + I ++++A+++
Sbjct: 248 TASMLDAFEPISATIGSILVFNMHFYLADMIGSVLIILAVILLNW 292
>gi|300694686|ref|YP_003750659.1| transporter, permeases of the drug/metabolite transporter
[Ralstonia solanacearum PSI07]
gi|299076723|emb|CBJ36063.1| putative transporter, permeases of the drug/metabolite transporter
[Ralstonia solanacearum PSI07]
Length = 297
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 94/297 (31%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++W + ++ V + +R L + + F +
Sbjct: 3 VLYPLLAVLVWAANTIVSKAAAGVLDPAAISFYRWLIAAVVLTP----FWARPLWRQRRD 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V + L ++ YA T + P++ + + SV ++ +
Sbjct: 59 VLPWLPRLSVLALLGLVMYQCLSYYAAHTTSATNMGVICALIPMLGLIINSVVFRQPVGA 118
Query: 146 LQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L + + +L +L + + G+ + + + +AY +
Sbjct: 119 LAVAGVAVSLLGVLYLLGRGHPASLFNGGVNQGDVLVLIGSAAYALYNILYRRWAPPFGQ 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L ++ + + + + L + + G+ R
Sbjct: 179 WLNLYLQALLAVVMLLPLALTAQSLAIPHQGIGMVLFAGIGASIVAMYWWMLGLARLGSE 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+M P+ + + +L + + I G++++ + + + G+N+ +
Sbjct: 239 RTVVMMNLLPVFTALMASAMLGETVHGYHYIGGGLILLGVSLVQGIATLPMGRNRLR 295
>gi|269963736|ref|ZP_06178055.1| hypothetical protein VME_44390 [Vibrio harveyi 1DA3]
gi|269831529|gb|EEZ85669.1| hypothetical protein VME_44390 [Vibrio harveyi 1DA3]
Length = 311
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 9/303 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ G L + A +LWG T F QVS L + + +
Sbjct: 7 QSTSQYQSGALAILFASLLWGTTGTAASFAHQVSPLAIGAFAMGVGGVIQAVLSWRSISH 66
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL--- 134
K A+ + + LA + + + + + F T +I
Sbjct: 67 QFHQILLFKLALAMSSVALAVYPLAFYTSMKLSGVAVGTVISIASAPFFTVLIECLFSKG 126
Query: 135 ------GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
V + + ++ ++ ++ IA A
Sbjct: 127 KRVSVQWWVSFAFGVVGIMMLVMAKSGGAVESDQASYFFGIVLGLIAGLSYAIYSWVAKR 186
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + ++ + GE+ F G ++ + + + +
Sbjct: 187 MIDGGIKSQAALGSIFAGGALLLLPSLAFTGENLFTGATNASVSVYMAIVPMCLGYLAYG 246
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
YG++ +S+ ++ P++ V +V+I+ + I I G++ + +++ L N
Sbjct: 247 YGLRHVDVSSANLLTLFEPVVAAVLAVWIVGEKIAISGWIGIGLIGVCLILQTLDKDANK 306
Query: 309 GKN 311
K
Sbjct: 307 PKQ 309
>gi|206967577|ref|ZP_03228533.1| transporter, EamA family [Bacillus cereus AH1134]
gi|229176996|ref|ZP_04304391.1| Transporter, EamA [Bacillus cereus 172560W]
gi|206736497|gb|EDZ53644.1| transporter, EamA family [Bacillus cereus AH1134]
gi|228606471|gb|EEK63897.1| Transporter, EamA [Bacillus cereus 172560W]
Length = 316
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/305 (14%), Positives = 101/305 (33%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKLIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ F I++
Sbjct: 190 SKTLDIGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFYIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQKM 309
Query: 310 KNKTK 314
+ + +
Sbjct: 310 EQEKQ 314
>gi|187920046|ref|YP_001889077.1| hypothetical protein Bphyt_5348 [Burkholderia phytofirmans PsJN]
gi|187718484|gb|ACD19707.1| protein of unknown function DUF6 transmembrane [Burkholderia
phytofirmans PsJN]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 77/286 (26%), Gaps = 7/286 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ + + + + + + EV R+L+ L +
Sbjct: 14 LRSVALILVSMFCFALVDALAKSVTLAYPANEVTFFRMLFGLLPAVAVCL-----RGKPL 68
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V A L G F L + ++ + L + LKE
Sbjct: 69 VERIRHMDVRGQTLRALTLLGASGLFFAGLPYMPLSEAVAIVYSETLLVIVLAPLLLKEA 128
Query: 143 LNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L +AA + + +L + + + SA+ A I +
Sbjct: 129 LKPRDALAAAVGFVGVLFVVRPDGSHSSWLGPVLLMSSAFFGALSIIQIKRIRASDDSGT 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + S + + + G + + + ++A +
Sbjct: 189 TVLYFTVIGTIVTSVSLFFAWRAPTLQALAVMALLGGFATAGQLLMTMAFRQADAGALAP 248
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
YT+ + + + I + + ++V + V +
Sbjct: 249 YNYTSIVWAALFGYVAWGETIGAMSLLGIALIVTSSVAVAMRGKQQ 294
>gi|323487384|ref|ZP_08092682.1| hypothetical protein HMPREF9474_04433 [Clostridium symbiosum
WAL-14163]
gi|323399290|gb|EGA91690.1| hypothetical protein HMPREF9474_04433 [Clostridium symbiosum
WAL-14163]
Length = 344
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/295 (9%), Positives = 84/295 (28%), Gaps = 20/295 (6%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++WG + + + ++ ++ + R +S +
Sbjct: 12 ILLALTALIWGSGFVCYKNLMSLLTPIQFVVVRSFFSAVCAGLFFLCVIRR--------A 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + ILA Y + +F V+ FL K++
Sbjct: 64 SRREWLGGFLLGGILAAAGLVQTYGIRITSSGNCAFLTGTNVVMVPFLSWALTKKKPGRS 123
Query: 147 QIIAALLIILSLLIMTLHSGI--PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +AL++ + ++T+ + + + A+ +A G G V
Sbjct: 124 NLFSALMMFAGVCLLTVDFNNITAVNAGDLLSFLGAFLYAVHIAVTGKLSGTVRPKAVTC 183
Query: 205 IPALFYVVWNGFSGG---EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L N F + + + ++ + +
Sbjct: 184 LQFLALFTVNLLFVPLEETPFIIPPAAVLPAAYLGIVSIFIGHTLQIICQEKVDSTKAAV 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + + S +L + F + + + + + + + +++
Sbjct: 244 LLSLEGVFGSIFSAILLGERYRLPALAGFVL------YFFINSAVADRRTRQERT 292
>gi|317509132|ref|ZP_07966758.1| integral membrane protein DUF6 [Segniliparus rugosus ATCC BAA-974]
gi|316252568|gb|EFV12012.1| integral membrane protein DUF6 [Segniliparus rugosus ATCC BAA-974]
Length = 330
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/298 (9%), Positives = 83/298 (27%), Gaps = 16/298 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ + G A + +G++ + + L Q VL L A +
Sbjct: 1 MKSTRQTQLAGLPLAVAAAMCFGVSGPFAKTLTQAG--WSTGGVVLTRLGIAAVAAALVA 58
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ ++ + + F A + +++PV+ +
Sbjct: 59 QWFEPDWWRTVWRHRSAVALYGLISMVISQFCFFSAAQHMSVGIALMLEYLSPVVVISWM 118
Query: 136 SVFLKERLNHLQIIAALLIILSLL--------------IMTLHSGIPLLSLAIAVTWSAY 181
+ R + ++ A + ++ + + A + +
Sbjct: 119 WASTRVRPSAGVLVGASVALIGAMTVLGVFTGASIDGAGVLWGLAAASAGAAYFILGHRF 178
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ + F + AI A + + L+ G
Sbjct: 179 SDNVSPTALAAGGLVFGTAGMAAIVATGLAPAVKGAQEVTMAGAQTSALVPLVALGFTTG 238
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I R + + I+ + ++ + +L + + ++ I +++ + +
Sbjct: 239 LAYPFGVAAISRLRPTVASILGLLEIPVAVLMAWLLLGERLSVLQMIGAAVLLSGVAL 296
>gi|303327115|ref|ZP_07357557.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
gi|302863103|gb|EFL86035.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
Length = 302
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 12/275 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G +++ A W + + ++ VS LE R + G
Sbjct: 18 RLSGYVWILLAAFFWSLIGVISKICMSAGVSPLETAFWRAAFGGALFLVHATLHKGLF-- 75
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ A L+F + V +G YA+ + + PV + +
Sbjct: 76 ----IRLRDAGIFLLFGVWGVGVFFGATQYAIQLSGAAMAVVLLYTAPVWVAVFSRLLFR 131
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEGF 196
ER++ +I A + + ++ G ++ C+A +
Sbjct: 132 ERISPRKIGAIGVALTGTTLVCFSGGSLPGRTSLLGIGCGLLTGLCYASHYPFYRWWQNR 191
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + V+ F + F + + G+KR L
Sbjct: 192 YATATIYGFMLAGGVLALWFCVPVSLNHEPRVWFWLAVLGVTSTFFAYTCYGQGLKRISL 251
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ + P+L + ++ + G
Sbjct: 252 VRAAVTCHLEPVLSTLWVWLFWQENFSLGGWLGSG 286
>gi|239504305|ref|ZP_04663615.1| hypothetical protein AbauAB_18463 [Acinetobacter baumannii AB900]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F Q V V+ R L +
Sbjct: 16 KALLCLMTSALLFSIMGVCIRFASQTVDNATVVFFRNAVGLFIFIPMLF-------KQGL 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 69 DFIKTDKLWMHTWRSIVGLAAMYGFFYAIAYLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + +L+ + + A + V + ++
Sbjct: 129 TKSMIFAAVIGLIGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + LI GLL + SY A +G M
Sbjct: 189 FYFCVFGSLISSIPMFWHWRIFTWHELALLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 249 YIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILL 284
>gi|209521244|ref|ZP_03269965.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
H160]
gi|209498322|gb|EDZ98456.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
H160]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 75/283 (26%), Gaps = 7/283 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ + + + + + L E+ R+L+
Sbjct: 14 LRSVALILASMFCFALVDALAKSLALAYPANEITFFRMLFG-----LFPAVAMCMRGKPL 68
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
T V A L G F L + ++ + L + L E
Sbjct: 69 ATRLRQLDVRGQTVRALALLGSSGLFFAGLPFMPLSEAVAIVYSETLLVIVLAPLLLHET 128
Query: 143 LNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L +AA +L++ + SA C A I +
Sbjct: 129 LKPRDALAAAFGFAGMLLVVRPEGSHSSWLGPALLIASALCGALSIIQIKRIRASDDSGT 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L + G S + + + G L + + + + A +
Sbjct: 189 TVLYFTLVGTLVMGASLLLAWRTPSFDALAIMALLGALATAGQLLMTMAFRDADAGALAP 248
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
YT+ + + + + I + + ++V + + +
Sbjct: 249 YNYTSIVWAALFGYLVWGETIGAISLLGIALIVGSSIAVAMRR 291
>gi|251794580|ref|YP_003009311.1| hypothetical protein Pjdr2_0545 [Paenibacillus sp. JDR-2]
gi|247542206|gb|ACS99224.1| protein of unknown function DUF6 transmembrane [Paenibacillus sp.
JDR-2]
Length = 320
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 97/296 (32%), Gaps = 22/296 (7%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ G++ L+ + L+ S L+ ++ R S + +++
Sbjct: 3 HKEMRLPYFLAVLNAVIIGLSFLFAKTALDYASPLDTLAFRFTSSFLVMSIPVLF----- 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+K + + +L+ ++ + Y L Y TPV+++ + S+F
Sbjct: 58 GWIKLSYRGKPLRKVLLLASMYPLGFFTLQGYGLQHANSAEGGILYAFTPVVTMIIASMF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA--------VTWSAYCFARKTIPV 190
LKE LQ ++ L + ++ + + G + + A
Sbjct: 118 LKETTTVLQKLSIFLSVFGVVFIFVMKGSSIDLSNLLGISLLLLTCFAFAGYTVLARSLS 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNG--------FSGGEHFFLGNIPDTLFLIGYGLLNSF 242
I ++ I +F+ V + S + + +
Sbjct: 178 RQFSPAEITYLMMGIGFVFFTVTSLTSHASAGTLSHIFAPLASGTFIASLIFLGIVSSLL 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+Y + + + S + + + ++ + + L + I I +++ ++
Sbjct: 238 TALTSNYILSKMEASKMSVFANLSTIVSMTAGAVFLGEEITIYHLIGSVLIIAGVI 293
>gi|83313431|ref|YP_423695.1| DMT family permease [Magnetospirillum magneticum AMB-1]
gi|82948272|dbj|BAE53136.1| Permease of the drug/metabolite transporter superfamily
[Magnetospirillum magneticum AMB-1]
Length = 297
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 12/283 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + A L+ + L SV++V+ R + L + +
Sbjct: 18 GIAAMLAATSLFAGMDALAKLLMAADYSVVQVLFFRAAFGLLPLVPLVW-------RGGL 70
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ V +TI V G F A+ + F P++ L LKE +
Sbjct: 71 RSVATQRPWTHVIRSTIALVAVGCFFQAIHRLPLAQVTAIGFAAPLLITALSVPLLKEHV 130
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK---TIPVGSSEGFFIEM 200
+ + +A +L++ L + + + + +
Sbjct: 131 SLGRWLAVAAGFGGILLVAGPEAWAGDLLGLGAALAVAGTFLYALVIVLMRVMGRTEAAV 190
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ ++ ++ G + + + G+L + S ++ A S V
Sbjct: 191 TTVFWFSVLTMILCGAALPLVWRTPDTQAWGLFAATGILGGIAQLLISQAVRLAPASLVA 250
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+Y ++ + + +V+ + + L
Sbjct: 251 PFDYFHIVVSASLGWLLFSEIPTLNTLAGALVVMASGLYVLRS 293
>gi|117921312|ref|YP_870504.1| hypothetical protein Shewana3_2871 [Shewanella sp. ANA-3]
gi|117613644|gb|ABK49098.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
ANA-3]
Length = 283
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 109/289 (37%), Gaps = 10/289 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +L L + LE V +++ +R L++ V + G L L
Sbjct: 4 LLMILAAQLLIASGNLLVKLLETNAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP--- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A ++ + F+ A+L + + +P++ + + + FL ER+ +
Sbjct: 61 ----FYKVHLSRALLIGLGNAIFMLAVLHLPLATVTAVIYTSPLLLLLMSAFFLNERIGY 116
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +A ++ +L+++ + A A ++ + + L
Sbjct: 117 RRTVAGIIGFTGILLISQP--TEFNLYIGLAFFGAMTSATNSLILKAYSTHEHPFSTLFW 174
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
F +V+ + ++P + GL + + + +RA S + +EYT
Sbjct: 175 SNAFAMVFLIPATWYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYT 234
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + L + + V I G+V+ + ++ + K++
Sbjct: 235 GLIFAALFGWWFLDEHLSIVVCIGIGLVIFSSILPSYSELKAKWKSRRS 283
>gi|320100367|ref|YP_004175959.1| hypothetical protein Desmu_0158 [Desulfurococcus mucosus DSM 2162]
gi|319752719|gb|ADV64477.1| protein of unknown function DUF6 transmembrane [Desulfurococcus
mucosus DSM 2162]
Length = 297
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 90/288 (31%), Gaps = 10/288 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG + A +LWG + + + + + L + R L ++ + ++ +
Sbjct: 14 MGIASLVAATVLWGSSFPFIKLSVMDIEPLTYAATRSLVAILLLTPLLLA-----KATRG 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ ++ L + + T + + + V++ V +
Sbjct: 69 VIHTGSLYRGVIIGVAYLLGLYLQAAGTVYTTPSISAFITGLNSVHVHVYIALVKKSYSV 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+A LL + L ++T SG + + + S A+ + + +E+ L
Sbjct: 129 M--DGVALLLAVSGLYVLTSPSGGLTIGVLLVFLGSIAWAAQILLVSRFNSSSIMEL--L 184
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + + +G + T ++
Sbjct: 185 YGMFLPGALMYPLVSASTEGVSLRVLVYIAYLAAACTVGATFLQVWGQRYVSPLTAALIF 244
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ + S+ + + + + + G++V + + + + K
Sbjct: 245 LLEPVFALFFSLIMGLEEPEPYKLVGGGLIVASTYLASATELSHEEKR 292
>gi|315266334|gb|ADT93187.1| RarD protein, DMT superfamily transporter [Shewanella baltica
OS678]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/299 (20%), Positives = 123/299 (41%), Gaps = 5/299 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI---VYFS 75
++ T +G A L+ + YT L+ +S E+ R+L++LP + I Y+S
Sbjct: 3 SNPNTSLGVSLNVAASALFALMFAYTALLDTLSGEEIYGWRILFTLPLLTVFIGVQGYWS 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + ++ + S+ ++A+ F++A G S YF+ P+ V +G
Sbjct: 63 QVIVIYQRIIREKHFWLTRIASSFLIAIQLWLFMWAPSNGYGLAVSLGYFIMPITMVVVG 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
K++L+ +Q+IA L +L +L + S F + ++ G
Sbjct: 123 RFAFKDKLSRMQLIACLFALLGVLNQLVISQTLAWPTLAICLGYPIYFWLRQKTDTNNIG 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L++P Y + +G E + P L + + +
Sbjct: 183 GVWFDMMLSVPVSIYFILSGGYVIESLSHNSSPLWLAIGLGAISALALGLQSLSA-PYLN 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS G++ Y PLL++V ++ L + I + + +A++V +L + K+K
Sbjct: 242 LSLFGLLIYVEPLLLLVVAIM-LGETITPDEWPTYIGIWLAVIVLILEGGLRVIKSKNS 299
>gi|241759208|ref|ZP_04757315.1| Integral membrane protein DUF6 [Neisseria flavescens SK114]
gi|241320529|gb|EER56818.1| Integral membrane protein DUF6 [Neisseria flavescens SK114]
Length = 291
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/290 (8%), Positives = 85/290 (29%), Gaps = 3/290 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++WG + + ++ ++ ++ R+L + V + G + +
Sbjct: 1 MLYQILALLIWGSSFIAAKYSYEMLDPTLMVEARLLIAALMVLPSCRRHLGRIPRSEWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + + + A L +
Sbjct: 61 LLWISFVNYVVVLMLQFIGLKYTSAASAVTMVGLEPLLVVFVGHFFFNDKAKLYHWICCA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ ++++ L + + ++ + + F +
Sbjct: 121 VAFAGVGMMVMGGAEEGGTIDWFGCLLILLAGLGFAGVIRPSQQMIARIGVPAFTAASMA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A L + L + + +++ G+ + G++
Sbjct: 181 AAAVLCLPFSLVLADSYQINWSWGGTLSILYMGIGCSWLAYLLWNKGMNTVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P++ ++ +V IL + + + + +V+++ V + +++ K
Sbjct: 241 SLEPVIGVIMAVLILGEHLSAMSAMGITVVIVSTFVAGMLARVSNKHKKA 290
>gi|169797182|ref|YP_001714975.1| hypothetical protein ABAYE3194 [Acinetobacter baumannii AYE]
gi|213156027|ref|YP_002318072.1| integral membrane protein, DUF6 [Acinetobacter baumannii AB0057]
gi|215484645|ref|YP_002326880.1| hypothetical protein ABBFA_002994 [Acinetobacter baumannii
AB307-0294]
gi|332856921|ref|ZP_08436330.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332867175|ref|ZP_08437440.1| putative membrane protein [Acinetobacter baumannii 6013113]
gi|169150109|emb|CAM88003.1| putative membrane protein [Acinetobacter baumannii AYE]
gi|213055187|gb|ACJ40089.1| integral membrane protein, DUF6 [Acinetobacter baumannii AB0057]
gi|213987014|gb|ACJ57313.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332726975|gb|EGJ58480.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332734114|gb|EGJ65246.1| putative membrane protein [Acinetobacter baumannii 6013113]
Length = 308
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 89/300 (29%), Gaps = 22/300 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLE----VISHRVLWSLPGVFFAIVYFSGGLSL 80
+G+ F C+ L+ ++ + +S L +++ R+L +LP +
Sbjct: 10 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDGTVLMALRMLSALPFFLLICWFNRHH--- 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+K + ++ L+ L F+ P ++V S+ K
Sbjct: 67 -NQGIKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIASSLLYK 125
Query: 141 ERLNHLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARK 186
++L+ + A L ++ L + S +
Sbjct: 126 QKLDVKSLFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSFVFASAVAFAGYLLLTPPLI 185
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ YV+ L + + L+ +
Sbjct: 186 KKFGSWNFTGLALTVACIGTLTHYVLSTPQPIQLLLQLPSSVIWYGIGLGFLVTVLPTVM 245
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + + ++ +++ L
Sbjct: 246 LMQSIERLGASQSAMIASIGPVLTILLAVAFLNEHLNIWQWAGCFLNIVGVMMITLRKKR 305
>gi|126325839|ref|XP_001365075.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 412
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/307 (11%), Positives = 92/307 (29%), Gaps = 22/307 (7%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + +F + + G L T+ + V LE+I R + + V Y
Sbjct: 100 QSRKTWIVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVLQVFSVLVVCYY--QDP 157
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +I + F I + T V S L +
Sbjct: 158 PFGPRGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRAT----TTVFSAILAFLL 213
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------------GIPLLSLAIAVTWSAYCFAR 185
+ ER+ ++ + + IL + ++ + + ++ + +
Sbjct: 214 VDERMAYIDMATVVSSILGVCLVMIPNIVDEENSLLNAWKEAFGYTMTVMAGLTTALSMI 273
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + + V F E + +LI + ++ F
Sbjct: 274 VYRSIREKISMWTALFTFGWTGTVWGVSTMFILQEPIIPLDGETWGYLIAICICSTAAFL 333
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y + + + V +++ ++ ++ + +L I++I++ V +
Sbjct: 334 GVYYALDKFHPALVSTVQHLEIVVAMILQLLVLHIFPSVYDVFGGAIIMISVFVLAGYKL 393
Query: 306 INSGKNK 312
+
Sbjct: 394 YWRKLKR 400
>gi|30264560|ref|NP_846937.1| EamA family protein [Bacillus anthracis str. Ames]
gi|47530026|ref|YP_021375.1| eama family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49187382|ref|YP_030634.1| EamA family protein [Bacillus anthracis str. Sterne]
gi|165871517|ref|ZP_02216164.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167635613|ref|ZP_02393925.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|167641654|ref|ZP_02399899.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|170688266|ref|ZP_02879476.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|170708388|ref|ZP_02898832.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|177653094|ref|ZP_02935381.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190566822|ref|ZP_03019738.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|196034485|ref|ZP_03101894.1| transporter, EamA family [Bacillus cereus W]
gi|218905717|ref|YP_002453551.1| transporter, EamA family [Bacillus cereus AH820]
gi|227817272|ref|YP_002817281.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|228948215|ref|ZP_04110499.1| Transporter, EamA [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229601700|ref|YP_002868775.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|254687020|ref|ZP_05150878.1| transporter, EamA family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724582|ref|ZP_05186365.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
gi|254736594|ref|ZP_05194300.1| transporter, EamA family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254741632|ref|ZP_05199319.1| transporter, EamA family protein [Bacillus anthracis str. Kruger B]
gi|254754770|ref|ZP_05206805.1| transporter, EamA family protein [Bacillus anthracis str. Vollum]
gi|254757602|ref|ZP_05209629.1| transporter, EamA family protein [Bacillus anthracis str. Australia
94]
gi|30259218|gb|AAP28423.1| transporter, EamA family [Bacillus anthracis str. Ames]
gi|47505174|gb|AAT33850.1| transporter, EamA family [Bacillus anthracis str. 'Ames Ancestor']
gi|49181309|gb|AAT56685.1| transporter, EamA family [Bacillus anthracis str. Sterne]
gi|164712814|gb|EDR18344.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167510361|gb|EDR85762.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|167529033|gb|EDR91788.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|170126763|gb|EDS95646.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|170667772|gb|EDT18525.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|172081618|gb|EDT66689.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190561813|gb|EDV15782.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|195993027|gb|EDX56986.1| transporter, EamA family [Bacillus cereus W]
gi|218539823|gb|ACK92221.1| transporter, EamA family [Bacillus cereus AH820]
gi|227002486|gb|ACP12229.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|228811573|gb|EEM57910.1| Transporter, EamA [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229266108|gb|ACQ47745.1| transporter, EamA family [Bacillus anthracis str. A0248]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 94/293 (32%), Gaps = 12/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + L + K +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKDLYIEKSEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KSVLLI-----GIIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G F
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFFITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ +++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLVWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQK 292
>gi|298384956|ref|ZP_06994515.1| transmembrane permease [Bacteroides sp. 1_1_14]
gi|298262100|gb|EFI04965.1| transmembrane permease [Bacteroides sp. 1_1_14]
Length = 305
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 103/294 (35%), Gaps = 18/294 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G LF A ++WG+ + L++ S + V + R++ + + ++
Sbjct: 3 NNKNLHGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWILSIFCKQ-- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + S L + G FI+ L S P++++ + +++
Sbjct: 61 ----EHVDHRDMLKIFFASLFALVFNQGIFIFGLSMTSPIDASIVTTTLPIVTMIVAAIY 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKT 187
LKE + + +++ + + LI+ + S G L +A +
Sbjct: 117 LKEPITNKKVLGIFVGAMGALILIMSSQAASSGNGSLIGDLLCLVAQISFSIYLTVFKGL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S+ M + A + S + + + L + +
Sbjct: 177 SQRYSAVTINKWMFIYASMCYIPFSYQDISVIQWTSIPTVAILQVLYVVLGGSFLAYLCI 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
K + + V + Y P++ ++++ + + I +V + + +
Sbjct: 237 MTAQKLLRPTVVSMYNYMQPIVATIAAILMGIGSFGWEKGIAITLVFLGVYIVT 290
>gi|212711828|ref|ZP_03319956.1| hypothetical protein PROVALCAL_02903 [Providencia alcalifaciens DSM
30120]
gi|212685350|gb|EEB44878.1| hypothetical protein PROVALCAL_02903 [Providencia alcalifaciens DSM
30120]
Length = 302
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 94/300 (31%), Gaps = 18/300 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ P M L + C ILWG T + + L +S L + R L++ + +
Sbjct: 1 MKNNKYLRPVNMIVLQMICVSILWGGTFIAGRVLQSDISPLLSATVRFLFASVSLVILLS 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G + + +L+ + + ++ F Y L + + P +
Sbjct: 61 VTRLGWKKINI----RQFAQVLLLGCSGIFIYQVLFFYGLQLIPASRAALLVAINPAMIA 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + +E++ ++ + +L I+ + A + + +
Sbjct: 117 LISYLLWREKITLMKGVGISCCVLGATILLSAKTSGVNGFLTNQGDIAILGCVVSWGIYT 176
Query: 193 SEGFFIEMCVLAIPALFYV-------------VWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
G I + AI + Y + + L N L
Sbjct: 177 VAGRNIIRDIGAIHTVAYAVLLGTLLLIIVTGMAGQLTIEGMAHLTNTDIVSLFYLGVLG 236
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + + GI + ++ G PL ++ L + I + +++ + V
Sbjct: 237 SALAYIWYYQGIDQLGAASAGAFIALNPLTAVIIGALFLNEEITFSALLGGIVIIFGLWV 296
Score = 39.1 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 13/141 (9%), Positives = 39/141 (27%)
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
+ +L + F + ++ V+ +
Sbjct: 6 YLRPVNMIVLQMICVSILWGGTFIAGRVLQSDISPLLSATVRFLFASVSLVILLSVTRLG 65
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ L+ +F YG++ S ++ P ++ + S + ++
Sbjct: 66 WKKINIRQFAQVLLLGCSGIFIYQVLFFYGLQLIPASRAALLVAINPAMIALISYLLWRE 125
Query: 281 PIDTVRTIVFGIVVIAMVVYL 301
I ++ + V+ + L
Sbjct: 126 KITLMKGVGISCCVLGATILL 146
>gi|329924649|ref|ZP_08279664.1| putative membrane protein [Paenibacillus sp. HGF5]
gi|328940483|gb|EGG36805.1| putative membrane protein [Paenibacillus sp. HGF5]
Length = 316
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/311 (12%), Positives = 102/311 (32%), Gaps = 22/311 (7%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T + G + ++ + L + L+ ++HR S ++
Sbjct: 6 TSRAYAAALGYTSIIGFSFMFVKLALIHANPLDTLAHRFTISFLAASLGLLIARR----- 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + + ++ + + + + L+ + P+ ++ L S+FLKE
Sbjct: 61 KVPMDLKRLLTIVPLAIFYPFLFFTLQTFGLVYTSSAEAGIIHATVPIFTLLLASLFLKE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSS 193
R + Q + +L + ++ + + G+ + ++ +A
Sbjct: 121 RSSWAQKLFTVLSVTGIISIFVLKGVSFEQSSTLGIVLILLSALSNAIYSVMARRMTQKQ 180
Query: 194 EGFFIEMCVLAIPALFY--------VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
I + I + + F+ + L L +
Sbjct: 181 SVLDITFIMSMIGFVLFNLMSVAQHAALGTLVHYFDPFMHSSFVWAVLYLGVLSSLGTSL 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ +Y + + + S +GI A ++ I V L + + I +V++ ++ L
Sbjct: 241 LSNYALSQIEASRMGIFNNLATVVTIFGGVAFLNEKLAYYHVIGAALVIVGVIGTSLAGR 300
Query: 306 INSGKNKTKKS 316
+ K + ++
Sbjct: 301 ARNAKKRLSRN 311
>gi|317487245|ref|ZP_07946041.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
gi|316921500|gb|EFV42790.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
Length = 294
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 83/294 (28%), Gaps = 19/294 (6%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +W T + T+ L +S E++ +R + + + A +
Sbjct: 8 YIIAVAVITVWSTTFVSTKILLRSLSPEEIMFYRHVLAYLVLLAAY-------PHRHPSG 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +++ YAL TP+++ + +
Sbjct: 61 GFREELLFAGAGIFGSTLYFLTENYALKYSMASNVGLLLATTPMLTAIVARFLTTGEPFN 120
Query: 146 LQIIAAL-LIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
Q+ A + L + ++ + L I + + +
Sbjct: 121 RQLAAGFCIAFLGVFLVIFNGHFILKLHPIGDFLAIAAALSWAFYSTLVKKIGNRYNGIY 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + F + + +S F I+S I +
Sbjct: 181 ITRKIFFYAIVTMLPVLAFGDFRYDFSRLWQPTTYLNLIFLGVIASSLCFLIWSKIIWKI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V Y PL+ +++S +L + + + +++ + V
Sbjct: 241 GPVAVNNFIYLMPLITMLASWLLLDEHLTPIAIAGGLVILAGVYVSTKAAHRKK 294
>gi|295402636|ref|ZP_06812582.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
gi|312111396|ref|YP_003989712.1| hypothetical protein GY4MC1_2388 [Geobacillus sp. Y4.1MC1]
gi|294975338|gb|EFG50970.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216497|gb|ADP75101.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y4.1MC1]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 85/283 (30%), Gaps = 13/283 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F+ A + W ++ ++ +E++S L + R + + + +
Sbjct: 5 IFLVLANLFWAGNYIFGKYVIEEISPLWLTFIRWVVAFLFLLPISYLLERPR---YREIM 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + F AL + + P I V L LKER+ +
Sbjct: 62 KQFWLPLSIAGVLGIIGYNLFLYGALEYTSPMNAAIVNSLNPAIIVILSFFLLKERMTFI 121
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARKTIPVGSSEGFFI 198
++ ++ +L + + + + + + + S
Sbjct: 122 NAAGFVISLIGVLFILTNGHLEWIFQTSYNRGDLIMLLAGIVWALYSIIGKKLSVPPITA 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
C L + L + + F F ++ +K+ S
Sbjct: 182 TTCSAFFSILLLFPFLFLQPLPLTGLSGKGWIGIIYICLFPSIFSFLFWNISVKKVGPSY 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
GI + + + + + I + I V+I + +
Sbjct: 242 AGIYLNLIAVFTAMITFLLGGE-ISASQLIGGAFVLIGVYLAT 283
Score = 37.6 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 1/132 (0%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW-NGFSGGEHFFLGNIPDTLF 232
+A + A + + ++ + LF + + +
Sbjct: 9 LANLFWAGNYIFGKYVIEEISPLWLTFIRWVVAFLFLLPISYLLERPRYREIMKQFWLPL 68
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
I L ++ I+ P ++++ S F+LK+ + + F I
Sbjct: 69 SIAGVLGIIGYNLFLYGALEYTSPMNAAIVNSLNPAIIVILSFFLLKERMTFINAAGFVI 128
Query: 293 VVIAMVVYLLPT 304
+I ++ L
Sbjct: 129 SLIGVLFILTNG 140
>gi|239500726|ref|ZP_04660036.1| hypothetical protein AbauAB_00295 [Acinetobacter baumannii AB900]
Length = 308
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 89/300 (29%), Gaps = 22/300 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLE----VISHRVLWSLPGVFFAIVYFSGGLSL 80
+G+ F C+ L+ ++ + +S L +++ R+L +LP +
Sbjct: 10 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDGTVLMALRMLSALPFFLLICWFNRHH--- 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+K + ++ L+ L F+ P ++V S+ K
Sbjct: 67 -NQGIKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIASSLLYK 125
Query: 141 ERLNHLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARK 186
++L+ + A L ++ L + S +
Sbjct: 126 QKLDVKSLFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSFVFASAVAFAGYLLLTPPLI 185
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ Y + L + + L+ +
Sbjct: 186 KKFGSWNFTGLALTVACIGTLTHYTLSTSHPIQLLLQLPSSVIWYGIGLGFLVTVLPTVM 245
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + + + ++ +++ L
Sbjct: 246 LMQSIERLGASQSAMIASIGPVLTILLAVAFLNEHLNIWQWVGCFLNIVGVMMITLRKKR 305
>gi|90961857|ref|YP_535773.1| drug/metabolite exporter family protein [Lactobacillus salivarius
UCC118]
gi|301301342|ref|ZP_07207485.1| putative membrane protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90821051|gb|ABD99690.1| Transporter, drug/metabolite exporter family [Lactobacillus
salivarius UCC118]
gi|300851045|gb|EFK78786.1| putative membrane protein [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 95/285 (33%), Gaps = 12/285 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVS----VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + WGI+ ++ +F+ + + V R++ S + F +
Sbjct: 10 IMIIISCTFWGISGIFAKFIFNLDRSNTPIFVSQIRMIISGLVILFFSWLNKDKPMEIWK 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
T K+ + M I + A+ + + F+ P +F ++ ++
Sbjct: 70 TKKSSFTIIMFGLLGLIPV--QYCYFEAIKYGDASIATILQFIGPFFILFYLTIVKRQAP 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI----- 198
+++I ++ + + I+ H I L++ V + A I
Sbjct: 128 RRIEVICTIIAFIGVFILATHGNINHLAITPQVLFWGLLSAIGVATNTLIPKSLIHEFSP 187
Query: 199 -EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ L L + F +F+ ++ K +
Sbjct: 188 TAVTGWGLLIAGVGLFIIHPHVSASILAPQAIVPLLCVLVIGTIIPFQLFTSALRYVKAT 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
T +++ P+ + S+ + I ++++A+++
Sbjct: 248 TASMLDAFEPISATIGSILVFNMHFYLADMIGSVLIILAVILLNW 292
>gi|228945295|ref|ZP_04107650.1| Transporter, EamA [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228814267|gb|EEM60533.1| Transporter, EamA [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 303
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T+ L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTVGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|197285651|ref|YP_002151523.1| hypothetical protein PMI1794 [Proteus mirabilis HI4320]
gi|194683138|emb|CAR43731.1| putative membrane protein [Proteus mirabilis HI4320]
Length = 306
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 95/302 (31%), Gaps = 14/302 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M +F A ++W I + + + + +R + + ++
Sbjct: 1 MKSVIFPLLAVLIWSINAVVNKAATSVIDPAAISFYRWFLAFLLMTPFLLVPVWHHRKTV 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + A + ++ YA + P+++V + L+
Sbjct: 61 KQY----WWKLFILGALGMGLYQSLAYYAAYYVTATFMGILNSLIPLLTVIISIFVLRVV 116
Query: 143 LNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ +L I L+ + H G+ L + + +AY F S
Sbjct: 117 PTVGIALGTILSISGLVWLVSHGDPSQLLSQGLGRGELMMFIASTAYAFYGVLTKRWSIP 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + I ++ F E L L + + ++ G+ +
Sbjct: 177 LPNWQSLYVQIGFGVLLLIPNFLTAESIALTKDNVGLVIFAGVGASILAPYLWILGVMKL 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL-LPTVINSGKNKT 313
+T I PL + +V +L + + + I G++++ + + L +N +
Sbjct: 237 GANTTSIFMNLIPLFTAMIAVAVLGEEMHSYHFIGGGVILLGIFLVQKLRAPLNFRRQSV 296
Query: 314 KK 315
K
Sbjct: 297 TK 298
>gi|126651031|ref|ZP_01723242.1| hypothetical protein BB14905_20290 [Bacillus sp. B14905]
gi|126592232|gb|EAZ86281.1| hypothetical protein BB14905_20290 [Bacillus sp. B14905]
Length = 305
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 112/297 (37%), Gaps = 12/297 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+ LFV+ A ILWG+T FL+ VS + V + R + +++
Sbjct: 14 MLNLLFVWLAAILWGMTGTAQTFLDNNVSPIAVATIRSAIGGGILLAITIFWRK------ 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ ++ +A+I FF LT T + PV S + + + R
Sbjct: 68 INFLHWSWKWTILAAASIALFQGLFFSSIRLTGVAIGTVATIGSAPVFSGIIEWIIWRNR 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFF 197
+ + +A L+ I+ L++ +++G + + + S + + + E
Sbjct: 128 PSIIWGLATLIAIMGCLLLFINNGEEAVQMGGFGLALCAGLSFAFYTNISKKLMVQEDAL 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + +++ S G + L + S + +F G+++ S
Sbjct: 188 PAVAMTFSLCTLFLLPFSLSNGFAWLENMQNLWTILFMGIMCTSVAYLLFLNGLQKINSS 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
T + PL + VF++ + + V + +++ ++VV + NK K
Sbjct: 248 TAVTLSLAEPLTAAILGVFLVGEQLSGVSWLGVAMLLGSIVVLTIGGRQGRLHNKLK 304
>gi|325577245|ref|ZP_08147729.1| DMT superfamily drug/metabolite transporter RarD [Haemophilus
parainfluenzae ATCC 33392]
gi|325160827|gb|EGC72948.1| DMT superfamily drug/metabolite transporter RarD [Haemophilus
parainfluenzae ATCC 33392]
Length = 291
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 106/286 (37%), Gaps = 5/286 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + L+ + L++ +L+ ++ +V + R++ + G+F I G SL K
Sbjct: 3 QGIFLGIISQFLFRLLYLFSLWLQPLNGTDVFAWRMVMMVFGLFLIIFPTVGCRSLSKLV 62
Query: 85 L----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ K + + F++A + +G + YF+ P++ LG ++LK
Sbjct: 63 NETLGKDKKRWMLFSLGTLDAGSQFWLFMWAPVNGEGVNIAMGYFLFPLVMALLGRIWLK 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ +QIIA + + H ++ V + + I +
Sbjct: 123 ETLSTIQIIALCIAACGVAHELWH-NQTFSWSSLWVCLVYPYYYLSRKAMKIPALQGITL 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V I + F + L GL+++ ++ +S
Sbjct: 182 DVCFIAIPCLIYLLIQEQQFSFVISESRYWYLLPALGLVSAIGLSANLKSNQQIPVSVFA 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ Y P L+ + ++F L + + + ++++ + +
Sbjct: 242 VLSYLEPTLLFLIAIFWLNTQVSLSDYFTYVPIWTSLILLGINGLR 287
>gi|293608799|ref|ZP_06691102.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829372|gb|EFF87734.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121440|gb|ADY80963.1| hypothetical protein BDGL_000377 [Acinetobacter calcoaceticus
PHEA-2]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F Q V V+ R L +
Sbjct: 16 KALLCLMTSALLFSIMGVCIRFASQTVDNATVVFFRNAVGLFIFIPMLF-------KQGL 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 69 DFIKTDKLWMHTWRSIVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + +L+ + + A + V + ++
Sbjct: 129 TKSMIFAAVIGLIGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + LI GLL + SY A +G M
Sbjct: 189 FYFCVFGSLISSIPMFWHWRIFTWHELALLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 249 YIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILL 284
>gi|293413093|ref|ZP_06655761.1| inner membrane transporter yicL [Escherichia coli B354]
gi|301018990|ref|ZP_07183213.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 69-1]
gi|291468740|gb|EFF11233.1| inner membrane transporter yicL [Escherichia coli B354]
gi|300399484|gb|EFJ83022.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 69-1]
Length = 307
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|212693571|ref|ZP_03301699.1| hypothetical protein BACDOR_03088 [Bacteroides dorei DSM 17855]
gi|237708730|ref|ZP_04539211.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237724178|ref|ZP_04554659.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|212663824|gb|EEB24398.1| hypothetical protein BACDOR_03088 [Bacteroides dorei DSM 17855]
gi|229437366|gb|EEO47443.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229457156|gb|EEO62877.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 308
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 91/304 (29%), Gaps = 20/304 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ G L + A I+WG+ + +S L + + R+ + A ++
Sbjct: 1 MAIQKYKGHLALLGAAIMWGLMSPIGKTALENGISGLSLATFRMTGGAICFWIASIFAPK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +K + + + ++ G F + L S P+ ++ + +
Sbjct: 61 ------EQVKPHDLMMLFFAGLLGIVLNQGCFTFGLSLTSPIDASIVTTTAPIATMIVAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFA 184
++LKE + ++I L + L + L S G L LA
Sbjct: 115 IYLKEPVTGKKVIGIFLGSIGALTLILSSQGSTDGKGGSIPGDLLCLLAQISFSFYLAIF 174
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ I + M A ++ S + +
Sbjct: 175 KGLISRYNIFTLMKWMFTYAAICFIPFSYHEVSTIHFHEISTSTWACVAYVIVGGTFLAY 234
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G K + + + + Y P++ S+ + + I +V + +
Sbjct: 235 ILMMIGQKTLRPTVISMYNYVQPIVGTSVSILLGMGTFGIAKGIAVALVFTGVYIVTQSK 294
Query: 305 VINS 308
Sbjct: 295 SREQ 298
>gi|331675143|ref|ZP_08375897.1| putative permease transporter [Escherichia coli TA280]
gi|331067681|gb|EGI39082.1| putative permease transporter [Escherichia coli TA280]
Length = 307
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYAGQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|325978054|ref|YP_004287770.1| hypothetical protein SGGBAA2069_c08540 [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325177982|emb|CBZ48026.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 295
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 92/285 (32%), Gaps = 15/285 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ +F A ++ + L + + +RVL+S+P + I
Sbjct: 7 NSIKDICLIFLAICFLATGGIFVK-LSPLPPINTGFYRVLFSIPMLLPFI-------KKS 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K + ++ + LA F+ + + +TP + + KE
Sbjct: 59 DVQALSRKQIMTIILAGAFLAGDLTFWNSSFSYTSVANANLLVNLTPFTVIPVSYFLFKE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSE 194
++ ++ L+ ++ +L++ + + A + A + +
Sbjct: 119 KMTPKFLLGGLVTLVGVLVLMANKVSLSSDRLLGDSLSLGASIFYAMFMITVYQLRDTVK 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I L V + G + L + + +Y + +
Sbjct: 179 SNVIMFFSAFGTLLVLAVVIFLTEGFYLPQNIAELLPLLALALVSQILGQGLLAYCLGKV 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S ++ + P++ + + I ++ ++ I I +I + +
Sbjct: 239 NASLSSLITLSQPIVAALYAWVIFQENLNLQSVIAIVITLIGVYL 283
>gi|317504912|ref|ZP_07962863.1| integral membrane protein [Prevotella salivae DSM 15606]
gi|315663962|gb|EFV03678.1| integral membrane protein [Prevotella salivae DSM 15606]
Length = 295
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 86/293 (29%), Gaps = 18/293 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++G + + WG T + T++L ++ E+ R L ++
Sbjct: 2 KENKKILGHVVGIITVLCWGGTFINTKYLIMGGLAPHEIFLLRFLIGYLC-----IWTIS 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L D K+ + ++ + L AL S + +
Sbjct: 57 PRRLFCDNWKDEALMVLIGMTGGSLFFQAENMAVALTYTTNVSFIGSTAPLITTCLAIAF 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP------- 189
V + + I+ +L+ + + ++ + L + + I
Sbjct: 117 VKSVKA-DFRLILGSLIALAGVGVVIFNGQFVLHLNPLGDLLALLSALAWGIYSLLMKRA 175
Query: 190 ---VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ I L + FL L + + F +
Sbjct: 176 SARYSAVFITRKVFFYGIITILPLFAVEPWHFPLDNFLKPTIWLNLLFLGFIASFVCFAL 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + I+ Y P+ +++S L +P+ + I ++++ + V
Sbjct: 236 WGWVIREIGAMKASNYIYLNPVTTVIASAIFLNEPMTLMAYIGSALILLGVYV 288
>gi|304392274|ref|ZP_07374216.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
gi|303296503|gb|EFL90861.1| ABC transporter, membrane spanning protein [Ahrensia sp. R2A130]
Length = 302
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/300 (9%), Positives = 87/300 (29%), Gaps = 8/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
++ A + LF+ +WG + L+ + + ++ L ++ RV + + ++
Sbjct: 1 MTSHPAPSARIWAMLFLL--AFIWGGSFLFARIAVLEIPPLTLVLLRVALASLTLNAVLI 58
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
++ G + ++ KN +G+L L + G + +
Sbjct: 59 FWRTGFTHNREAWKNFAIMGVLNNIIPFLLIFIGQKEIGAGLAAIVNAMTPIWTVLIAHQ 118
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKT 187
+ I+ + + + +++ K
Sbjct: 119 TTSDERMSAPKVVGIILGFAGVATLIGSAAFAGLEASAWAQLSVLGATISYGFASVFGKR 178
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + + + + ++F + +F
Sbjct: 179 FAEVPPMETARGQLTASTILIAPLALLWDQPWALPMPSALAIWSVIALAVICSAFAYILF 238
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ +A V ++ + P IV + L + ++T + +++ ++
Sbjct: 239 FEILSKAGAVNVSLVTFLVPPSAIVLGMIFLGETLETRHIVGMALILSGLIAIDGRLWKR 298
>gi|55376949|ref|YP_134799.1| hypothetical protein rrnAC0008 [Haloarcula marismortui ATCC 43049]
gi|55229674|gb|AAV45093.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 326
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 77/295 (26%), Gaps = 11/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + A +L G T + + L + L ++ R + + +V
Sbjct: 1 MISRRTFALAAVASVLLGGTFVGAKAGLSYLPPLLFVALRFDIAAVVLLGYVVVTR-SRD 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + + + F+ + VF +
Sbjct: 60 ELLPRTRGDVLGILSTGLFALGLANALIFVGQQSATSAVAAIIFSLNPILTPVFAAILLS 119
Query: 140 KERLNHLQIIAALLIILSL---------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
ERL+ + ++ +L + ++++ G +L A R +
Sbjct: 120 DERLSARGGLGMVIGLLGVGLVVSPDPAMLLSGGIGKLILFAGAASAALGSVLIRWSGGG 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
SS +A + L + + +
Sbjct: 180 LSSTVRTAWALPVAAALCHALSIGMGESAATAVWSPTAIAALLYVGIFAGAIAYIAYFGL 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ Y P++ + +L + I F + VV +V
Sbjct: 240 LDVTGAIQANLIFYVVPVVSTLGGWALLGEAITPTAVAGFLTIFTGFVVLGSESV 294
>gi|307110672|gb|EFN58908.1| hypothetical protein CHLNCDRAFT_140849 [Chlorella variabilis]
Length = 395
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/279 (8%), Positives = 67/279 (24%), Gaps = 26/279 (9%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
E S + R + P + ++ T + + + +
Sbjct: 86 EAFSPIVYALFREACAGPILLLL------SRAMAGRTHPKQSDLWRVGVMGGAMFLSQLL 139
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
+I + + + PV +V LG E+ N ++ L + + M
Sbjct: 140 YILGIELSGVTVATCMQPAIPVFTVLLGIALHMEQGNPRKLAGIGLSVAGAICMVAGGAA 199
Query: 168 PLLSLAIAV-------------------TWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ Y K + L
Sbjct: 200 SATHGHGVTQQEASNMLLGDVCLLINTLAMAVYYIVSKQMVQRYPAICVAAWAYLVAATC 259
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ F+ + + + + + ++ ++ S V + P
Sbjct: 260 MALAAAIFTEAADWHFPRSMVLPLIYWILVCSVAGYYAVTWAMRHLPASQVAAFQCLQPF 319
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + + +L + +V +++ +
Sbjct: 320 VGTLLAFLVLAEQPTAWDL-GAIGIVAGLLLVSTSSDRR 357
>gi|294498703|ref|YP_003562403.1| hypothetical protein BMQ_1940 [Bacillus megaterium QM B1551]
gi|294348640|gb|ADE68969.1| hypothetical transport protein YoaV [Bacillus megaterium QM B1551]
Length = 303
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 87/289 (30%), Gaps = 5/289 (1%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG T + + + + S R+ +F ++ L + K KN
Sbjct: 8 IISVTLIWGYTWVTMKIAISDIPPFLFSSLRLFIGAIPLFIILIIQRKRLFVDKGIFKNY 67
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ +L+ + + +G + + FVT + L ++ L
Sbjct: 68 LIMSLLMSLGYMAILTYGMQFVDSGKTSVLVYTMPIFVTIISHFKLDEKINIYKMVGLTF 127
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L+ + L +T + + A++W K ++
Sbjct: 128 GLLGLLFILGLEITNPDTKVIFGELLILISALSWGLANVFSKIRFKNIDFIHMNAWQLIM 187
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L +V+ N L +F F ++ + +K+ S +
Sbjct: 188 GALLLFVLSLILEPNYSVEWSNKALLSLLFNGLFSTAFTFVVWFWVLKKINASKASMALM 247
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P+L I+ L + I + ++ + + KT
Sbjct: 248 FVPILGIIFGSLQLGENITISIVVGSFLICAGIFMNTYNFKSTRKTKKT 296
>gi|264680592|ref|YP_003280502.1| hypothetical membrane protein [Comamonas testosteroni CNB-2]
gi|262211108|gb|ACY35206.1| hypothetical membrane protein [Comamonas testosteroni CNB-2]
Length = 301
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 89/298 (29%), Gaps = 8/298 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ ++ + G L A L+ + T+F + + ++ + V +V
Sbjct: 9 TLSPSAQSAIRGVLLTIFACALFAVLDSATKFTGTLLPVLMVLWLRFTAQALVTSVLVLP 68
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GLS LK + + A + + + + + P+ V
Sbjct: 69 RHGLSALKTRNLRFQLLR-----AISGLLTTVCAFFCIKNMPLANFTAIWSAAPLFIVVA 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIPVG 191
++F KE+++ + ++ +L+++ + A+ + +
Sbjct: 124 SALFFKEQVSPARWSLLVIGLLAVIAIVRPENDGQPLGLAALWPVGLLVSGTTYQVLGSR 183
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S L L ++ G + + GL + +
Sbjct: 184 LSRLDSPPTTQLYSTWLPLLLTTPLIGFVWQPIDDWQIYAAAAVMGLCSGIGHLMLLQAY 243
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +TV Y+ ++ Q D+ + +V ++ + + +
Sbjct: 244 THATPATVAPFLYSQIGFAMLMGWLFFGQRPDSTSLLGMTVVTLSGLTGVWLGIREKR 301
>gi|315498194|ref|YP_004086998.1| hypothetical protein Astex_1171 [Asticcacaulis excentricus CB 48]
gi|315416206|gb|ADU12847.1| protein of unknown function DUF6 transmembrane [Asticcacaulis
excentricus CB 48]
Length = 306
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 93/298 (31%), Gaps = 16/298 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + S ++ + A ILW + + + +S + + R + + +F V
Sbjct: 1 MQQYLKSSVSLKAYACLLIASILWAGNMVSGKLAVGHISPALLSASRWILAALVIFAVSV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ +L + A AL P++ +
Sbjct: 61 ----KPLRRDWPVIRQHLPLLLAYGFFGFASFNILLYTALEHTSAINVVIEDAGIPLVIM 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAY 181
L + + + Q+ + + +++ H L L V + AY
Sbjct: 117 GLNYALYRIKASWAQVAGFGVTAIGVMLTATHGDLRNIVRLDLNLGDALMLLAVVNYGAY 176
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
A + P + + A+ A + + + L L +
Sbjct: 177 TVALRYKPAIHWQSLMAIPTLGALGAAIPYLLWMSRDTGIVWPDTTGWLIVLYTGLLPSL 236
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +G++ + G+ T PL ++ SV IL++P+ +V+ +V+
Sbjct: 237 VAQVCYVWGVELIGANRAGLFINTIPLFGVILSVLILREPLHGFHLWALALVIAGIVL 294
>gi|229163479|ref|ZP_04291430.1| Transporter, EamA [Bacillus cereus R309803]
gi|228620048|gb|EEK76923.1| Transporter, EamA [Bacillus cereus R309803]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 94/293 (32%), Gaps = 12/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + L + K+ +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKDLYIEKNEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KSVLLI-----GIIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFLITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ +++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLVWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQK 292
>gi|256828107|ref|YP_003156835.1| hypothetical protein Dbac_0292 [Desulfomicrobium baculatum DSM
4028]
gi|256577283|gb|ACU88419.1| protein of unknown function DUF6 transmembrane [Desulfomicrobium
baculatum DSM 4028]
Length = 292
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + WG T + + L + R + + + F +G L
Sbjct: 7 LVGSVFFWGATWISGRILAQDMGPFSAALLRFVTASAFLLFWAWRANGSFPALP----KK 62
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + T + ++ FF L T + PVI + ++ L ERL +I
Sbjct: 63 DILPVAFLGLTGIFLYNAFFFTGLKTVPAGRAALIIASVPVIISIISALMLGERLTRGKI 122
Query: 149 IAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
LL + I+ G ++ +A + + + +
Sbjct: 123 AGTLLSLTGASIVLSGGNPLSLFQGGLSHGDLMILGCVAAWTAYSVAGSRVMKRVNPLMA 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
C+L L G+ + L + F + GI+
Sbjct: 183 VTWSCILGTLMLIVPALTHGLVGDIARASLVDWGNILFLGVVATGVAFTWYYAGIRAIGA 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ GI P+ I IL +P+ + +V+ + +
Sbjct: 243 ARAGIFINLVPVFAIAMGYVILDEPVTSALLTGGAMVISGVYL 285
Score = 38.0 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/125 (10%), Positives = 34/125 (27%)
Query: 177 TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY 236
+ + I F + + F + W + G L
Sbjct: 12 FFWGATWISGRILAQDMGPFSAALLRFVTASAFLLFWAWRANGSFPALPKKDILPVAFLG 71
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
F G+K ++ + P+++ + S +L + + + + +
Sbjct: 72 LTGIFLYNAFFFTGLKTVPAGRAALIIASVPVIISIISALMLGERLTRGKIAGTLLSLTG 131
Query: 297 MVVYL 301
+ L
Sbjct: 132 ASIVL 136
>gi|113970897|ref|YP_734690.1| hypothetical protein Shewmr4_2562 [Shewanella sp. MR-4]
gi|113885581|gb|ABI39633.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-4]
Length = 302
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 68/283 (24%), Gaps = 2/283 (0%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + +E +S R L + + Y + + T K+ +
Sbjct: 20 IWGFGFVAQTLGMEHLSPFAFNGLRFLIGTVSLVPLVWYLARQGKIHLGTPKDFAIGCVA 79
Query: 95 VFSATILAVH-WGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
V + + Y V I IA +
Sbjct: 80 VGGLLFAGASLQQVGLLYTTAANAGFITGLYIVLVPILGLALKHATGANTWVGCGIAVVG 139
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
+ + H G I + A + M + + ++
Sbjct: 140 LYFLSIKDGFHLGYGDTLQLIGALFWAMHILAVDHFAKRISPVLLAMMQFLVCGVLSLLV 199
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
+ + + + K A + I+ + +
Sbjct: 200 SAAIEVTTVDKVIAAWGSLAYAGLISVGIAYTLQVLAQKHAHPAHAAIILSLETVFAAIG 259
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ L + + G++++ M++ +P K S
Sbjct: 260 GILFLGESLGLRALFGCGLMLLGMLISQVPLRYLIKSRHQKVS 302
>gi|319781286|ref|YP_004140762.1| hypothetical protein Mesci_1554 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167174|gb|ADV10712.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 317
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 26/311 (8%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G L + +++ + + + V EV++ R + +LP + + G
Sbjct: 2 QMQNRMVGGILSLCLGVLVFSLQDPLVKAVSSGYPVTEVMAIRSIVALPILIVLVHADVG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++L GML A I + + A+ YF+ P+ + L
Sbjct: 62 LRAILSK------RFGMLTVRAFIQFTSYTMYYLAIAALPLADAVALYFMAPLFIMVLAG 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+L ER++ + L+ + +L+M A+ SA + +
Sbjct: 116 PYLGERVSWQTLATVLIGLFGVLVMLRPGAGLFDWAALLSLGSAALYGFSQLMARKIGDT 175
Query: 197 FIEMCVLAI-------------------PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
+ V + + +PD L + G
Sbjct: 176 ESSTVMAFYQNGAYLVGAAVVAGAFHLAGITHAVHPSLEFLVRPWLWPTLPDFLKMAACG 235
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ S + S + A + V EYT L + + + I +++ A
Sbjct: 236 FVASAGMILLSQAYRMAPANRVATFEYTGILWSPLWGFLFFAEVPRSTTVIGAALIIGAG 295
Query: 298 VVYLLPTVINS 308
++ L S
Sbjct: 296 LLALSTERRKS 306
>gi|309809038|ref|ZP_07702912.1| putative membrane protein [Lactobacillus iners SPIN 2503V10-D]
gi|308170694|gb|EFO72713.1| putative membrane protein [Lactobacillus iners SPIN 2503V10-D]
Length = 303
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 102/304 (33%), Gaps = 12/304 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ----FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ V + LWGI+ L + QVS + + R+L S +
Sbjct: 1 MKQQKKLWIFLVIISCNLWGISGLCAKRVFDLSTQVSPITITQIRMLISGLFLLLLAQLT 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+K + ++++ L F+ + + + F+ P +F
Sbjct: 61 GK--KPIKILYSRKNIIDIILYGLFGLIPIQLFYFIVVQKSNASIATILQFMGPFFIMFY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VF + L L I+AAL+ + ++ + H +SL+ V + + A
Sbjct: 119 MVVFEHQFLRRLDIVAALVAFMGIIFIATHGNFSKISLSPEVLFWGFLSALGVATNTLIP 178
Query: 195 GFF------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ A ++ + + L ++ L F
Sbjct: 179 RPLLKRMDSVTLIAWSMIATGLMMLIAYPSQILIPKDSRVIILLVVIIILGTILPFYCML 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST I++ P+ + SVF+ + + + +V++A++
Sbjct: 239 NSLRYIKPSTASILDAFEPISATLGSVFVFNLTLKPIDWLGTILVILAVIAICYQPKSKM 298
Query: 309 GKNK 312
+
Sbjct: 299 KSIR 302
>gi|221632921|ref|YP_002522143.1| membrane protein [Thermomicrobium roseum DSM 5159]
gi|221157123|gb|ACM06250.1| Integral membrane protein DUF6 [Thermomicrobium roseum DSM 5159]
Length = 303
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 98/298 (32%), Gaps = 17/298 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
E++ ++G F + + + + VS E+ R+L + + +
Sbjct: 12 ESSRNDFVIGLGFAVAGVLAVSTSAVLIRLAGSVSAFEIAFWRLLVATLALVPVALATRT 71
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++ LAVH+ + AL + + ++ L +
Sbjct: 72 LGAVRSLGWPRLAIY------GATLAVHFVAYNAALQFAPVAHVLPLLYTSTIMLAILSA 125
Query: 137 VFLKERLNHLQIIAALLIILSLLIMT-----------LHSGIPLLSLAIAVTWSAYCFAR 185
LKE L QI ++++ ++++T + G+ LLS A +S
Sbjct: 126 FLLKESLRPRQIAGIVIVLSGVVVLTGFEPRFGLRIAIGDGLALLSAAAYAAYSLVGRRE 185
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + F ++ +G L + N+
Sbjct: 186 RARIPLLAYAIAVYGSAAVWVFPFALLAALSAGASVARYDWQVVAALLGLGLIPNTLGHT 245
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+++ ++R + ++ I+ + IL + + I+++ ++ LLP
Sbjct: 246 LYNASVRRLNAAIANVIYTQEMTGAILLAWLILGEVPGVNAVVGAIIMLVGILFVLLP 303
Score = 38.0 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 36/81 (44%)
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
L YG + F ++ ++ A ++ V + YT+ +++ + S F+LK+ + +
Sbjct: 80 WPRLAIYGATLAVHFVAYNAALQFAPVAHVLPLLYTSTIMLAILSAFLLKESLRPRQIAG 139
Query: 290 FGIVVIAMVVYLLPTVINSGK 310
IV+ +VV +
Sbjct: 140 IVIVLSGVVVLTGFEPRFGLR 160
>gi|91778838|ref|YP_554046.1| hypothetical protein Bxe_B1260 [Burkholderia xenovorans LB400]
gi|91691498|gb|ABE34696.1| Putative membrane protein [Burkholderia xenovorans LB400]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 81/286 (28%), Gaps = 7/286 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M + + + + + + EV R+L+ L ++ + ++
Sbjct: 14 MRSVALILVSMFCFALVDALAKSVALAYPANEVTFFRMLFGLVPAVAMCLHGKPIVERIR 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
A L G F L + ++ + L + LKE
Sbjct: 74 HMDVR-----GQTLRALTLLGASGLFFAGLPYMPLGEAVAIVYSETLLVIVLAPLLLKET 128
Query: 143 LNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L +AA +L++ + + SA+ A I +
Sbjct: 129 LKLRDALAAAAGFAGVLLVVRPDGSHSNWLGPVLLIASAFFGALSIIQIKRIRATDDSRT 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + G S + ++ + G + + + ++A +
Sbjct: 189 TVLYFTAVGTIVTGASLCFAWRTPSLQALAVMALLGGFGTAGQLLMTMAFRQADAGALAP 248
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
YT+ + + + + I + + ++V + + +
Sbjct: 249 YNYTSIVWAALFGYVVWGETIGGMALLGIALIVGSSIAVAMRGKQQ 294
>gi|84685960|ref|ZP_01013856.1| Putative transporter, DMT superfamily protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84666053|gb|EAQ12527.1| Putative transporter, DMT superfamily protein [Rhodobacterales
bacterium HTCC2654]
Length = 325
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 82/290 (28%), Gaps = 12/290 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ + ++W + + + ++ R + S + L +
Sbjct: 30 IRAIMMGLAFAVMWSSAFTSARIIVADAPPMTALAIRFVISGLMAMGLARMLGQRIRLTR 89
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ ++VF A++ G A+ T + S P+I LG V ++R
Sbjct: 90 GQWIS-----VVVFGVCQNALYLGLNFIAMQTIEAGFASIIASTMPLIVGLLGWVVFRDR 144
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------F 196
L L ++ ++ + ++ + + + A +
Sbjct: 145 LPMLAVVGLVVGFAGVALIMGSRISGGVDMYGLILCVIAAVALAVATLSVRTASGGGNLL 204
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + A+ + F + ++ ++R
Sbjct: 205 MVVGLQMLVGAIALAPFALALEPFEVNWNTGLVAAFAYTTLVPGLAATWVWFELVQRIGA 264
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ P + + +L + + + I +V + ++ L
Sbjct: 265 VRAATFHFLNPFFGVAIAAVLLGEQLGLLDVIGVAVVTVGILAVQLSKQK 314
>gi|325265180|ref|ZP_08131906.1| putative membrane protein [Clostridium sp. D5]
gi|324029584|gb|EGB90873.1| putative membrane protein [Clostridium sp. D5]
Length = 290
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 107/292 (36%), Gaps = 9/292 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + +L+G++ L+ +++E + + ++ RV++S + F + + LL
Sbjct: 5 NQKKGLASIHVSVLLFGLSGLFAKWVE-LPAVIIVLGRVIFSSLFLLFLLKIKKERMRLL 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +LAVHW F+ ++ T + + ++ P+ FL V E
Sbjct: 64 AGKDYLRMIT-----AGIVLAVHWTTFMQSIQTSTVAIGTLTFSTFPLFVTFLEPVLFHE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+L +++A++++ +L + + + F+ + + +
Sbjct: 119 KLRISSVVSAVVMLCGVLFIVPEFQLGNAMTQGVIWGMIGSFSYAVLSLMNRMFMEKYTS 178
Query: 202 VLAIPALFY---VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L VV + + L+ + + ++ G++ K+ T
Sbjct: 179 GLTAFYEQATASVVLLPSLFILKPAVNGNDILVLLLLGVVFTAVAHTMYIDGLRTVKVQT 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
GI+ + I+++ L + I++ + L + N K
Sbjct: 239 AGIISGLESVYGILAAFLFLGEKPGVKELAGGVIILGVVFYSTLASSKNRSK 290
>gi|293604793|ref|ZP_06687190.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292816621|gb|EFF75705.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 316
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 104/300 (34%), Gaps = 20/300 (6%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + WG + + + ++ + I+ R ++ + + + + GL ++D P
Sbjct: 21 MLILCVCWGFQQIAIKLVAADIAPIMQIALRSSFAALVLLVVV-WRAEGLRAVRDGTALP 79
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ L+F A L V G F Y ++ L + +ER+ LQ
Sbjct: 80 GLLVGLLFGAEFLFVAQGLLYTTASHMSV----FLYTAPIFAALGLHWLLPEERMQPLQW 135
Query: 149 IAALLIILSLLIMTLHSGI--------------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ + + + L G + LA + W A A + + +
Sbjct: 136 LGVAVAFGGIAVAFLFKGGAPREAAGAANMLLGDAMGLAAGLLWGATTVAIRATSLSEAA 195
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +A+ A+ + + +G ++ + + + ++R
Sbjct: 196 PSKTLLYQMAVAAVGLLAYAVATGQHAIQPTPSALASVAFQAVVVALSSYLAWFWLLRRY 255
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S + I+ + PL + V IL +P+D I +V++ + + ++ +
Sbjct: 256 LASRLSILSFMTPLFGVSFGVLILDEPLDAGFAIGAVLVLLGITLVSGGELVKQWLRHRR 315
>gi|317046639|ref|YP_004114287.1| hypothetical protein Pat9b_0405 [Pantoea sp. At-9b]
gi|316948256|gb|ADU67731.1| protein of unknown function DUF6 transmembrane [Pantoea sp. At-9b]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 95/299 (31%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +G + A + + + L + EVI R +L + + L
Sbjct: 1 MNARLGVVLKIMAALCSTLMLACVKGLNGTIPTGEVIFFRSFVALFPLLIWLKIQGNVLE 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK + F AL+ + + P+ +V + +V L
Sbjct: 61 SLKTRNLFGHLIR-----GFSGTGGMYFNYLALVYISLADATALSYAAPLFTVIMAAVLL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPV 190
KER+ + +A ++ + +LIM + A + +A C A + +
Sbjct: 116 KERVRASRWLAVVVGLSGILIMLSSKLTLFSASAAHASAGIGVLCALVAAICTATSNVQI 175
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G ++ +L V + + + + L L+G GL + +
Sbjct: 176 RFLNGIEKPGAIVFYFSLMTTVIGLATLVFGWAMPSGTQLLLLLGCGLFGGLAQILVTLS 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ A S + +YT + +V L IV +A + +
Sbjct: 236 LRYADASLLAPFDYTTLVWSMVIGYLFLNSLPGPTTLFGASIVALAGIFAVWREQRQRK 294
>gi|228989934|ref|ZP_04149911.1| Transporter, EamA [Bacillus pseudomycoides DSM 12442]
gi|228769869|gb|EEM18455.1| Transporter, EamA [Bacillus pseudomycoides DSM 12442]
Length = 303
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 89/275 (32%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +L+
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPIVWF-----KEKKLFPPRAAILPLLL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T + + F AL + + S+FLKE++N LQI++ +L
Sbjct: 71 MGVTGVVLFNIFQFLALEETSATNVGLISTLNAISIALFSSLFLKEKINILQILSMILSF 130
Query: 156 LSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ +A ++ + + + +
Sbjct: 131 FGVILVLSKGNIALLFSLHFNSGDLWMMAAVCIWGIYSVCSKWATKTTTPMMATLYSGVF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVIILLPFNIPNFTVSHINASFITSLLYTGLISTVVCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIFGTIIVVTGCYLFS 285
>gi|261856291|ref|YP_003263574.1| hypothetical protein Hneap_1702 [Halothiobacillus neapolitanus c2]
gi|261836760|gb|ACX96527.1| protein of unknown function DUF6 transmembrane [Halothiobacillus
neapolitanus c2]
Length = 302
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 90/293 (30%), Gaps = 17/293 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG + F L +S + R + + V L L
Sbjct: 7 YALIILSTFFWGANFVLAGFVLTDLSPTWSAALRFGLAALILLGVAVSQGAPLGTLI--- 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+A F +AL T + P+++ FL + L E
Sbjct: 64 -RRHGSSYFTLGLIGVAGFNLLFFFALQTTSADNAALIMATNPLLTTFLAWLILNEHPGL 122
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+++A + +L + ++ L LA + W+ Y + + +
Sbjct: 123 QRLLALPVALLGVSVVISDGHLAHVIDLHIVQGDWLMLAANLCWAFYNVLNRRLMPKTVS 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+++ AL +V GF+ L + +++ GI R
Sbjct: 183 PTVNTALIVSAGALVLLVVAGFNPQGLHPLSLQAGFALTGLVIGGTVLAYLLWNTGIARL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ P+ ++S++ I ++ + IV + + ++P
Sbjct: 243 GAGRTALFMNLIPVFAMLSAITI-GTYPTPMQLLGGAIVFSGLFISMIPNRKK 294
>gi|218282452|ref|ZP_03488713.1| hypothetical protein EUBIFOR_01295 [Eubacterium biforme DSM 3989]
gi|218216597|gb|EEC90135.1| hypothetical protein EUBIFOR_01295 [Eubacterium biforme DSM 3989]
Length = 288
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 85/288 (29%), Gaps = 19/288 (6%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+G + F ++WG T + ++ L+ + +E++ R L + +
Sbjct: 1 MIGHILAFVCIMIWGSTFVSSKILLDTFTPIELLFIRFLIGFLTLCIL-------SPKIL 53
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
K + ++ T + +++ AL+ + P + L + K+
Sbjct: 54 KLEKRKDEIWYILSGLTGVFLYYFIESTALVYTYATNVGVIISIAPFFTSILAYLCFKDE 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP-----------VG 191
+ + ++ + +G + + I
Sbjct: 114 PFKINFVVGFIVAFIGIFFISFNGQQMHLSPKGDILTIVAAIMWAIYSVVLKKVNALGHT 173
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + + GF L + L + + F I+++
Sbjct: 174 SIQNTKRIFAWGLFFMTISLPILGFDVSMEEILIPLNLLNLLFLGVIACAGCFVIWNHSC 233
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P+ I+ SV IL + I + + + +++
Sbjct: 234 SILGSVRTNQYVYLNPIATIIFSVIILHEKITPCIVLGTILTLSGLII 281
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 12/137 (8%), Positives = 36/137 (26%), Gaps = 1/137 (0%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
++ +A + + F + + ++ S
Sbjct: 1 MIGHILAFVCIMIWGSTFVSSKILLDTFTPIELLFIRFLIGFLTLCILSPKILKLEKRKD 60
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVRT 287
+ +++ + I S + + VG++ AP + + +P
Sbjct: 61 EIWYILSGLTGVFLYYFIESTALVYTYATNVGVIISIAPFFTSILAYLCFKDEPFKINFV 120
Query: 288 IVFGIVVIAMVVYLLPT 304
+ F + I +
Sbjct: 121 VGFIVAFIGIFFISFNG 137
>gi|157371575|ref|YP_001479564.1| hypothetical protein Spro_3338 [Serratia proteamaculans 568]
gi|157323339|gb|ABV42436.1| protein of unknown function DUF6 transmembrane [Serratia
proteamaculans 568]
Length = 309
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 92/289 (31%), Gaps = 5/289 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV--YFSGGLSLLKD 83
LF A ++W I + ++ + + +R L +L + ++ ++ +
Sbjct: 8 MLFPLLAVLIWSINAVVSKLSATAIDPAAISFYRWLLALITLTPFVLPGVIRHWAAIRAN 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K + + LA + + AL + I + + + +
Sbjct: 68 WWKLMVLGMLGMVLYQSLAYYAAHSVSALFMGIIVSLIPLLTILISIVLLRVAPTVGIAI 127
Query: 144 NHLQIIA--ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L +A L+ L GI L + +AY + +
Sbjct: 128 GSLLSLAGLIWLVSAGNPGELLQHGIGKGELMMFAATAAYALYGVLTKRWAIALPNWQSL 187
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I ++ F + L + L L + ++ +G+ R +T I
Sbjct: 188 YVQIVFGVVLLLPDFLMAQDVALTSQNIPLVLFAGIPASIVAPYLWIHGVMRLGANTASI 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
AP+ + +V L + + + I GI ++ +++ K
Sbjct: 248 FMNLAPVFTAIIAVVFLHEHLHSYHLIGGGITLLGVILSQRLRTPLGRK 296
>gi|322513617|ref|ZP_08066715.1| DMT superfamily drug/metabolite transporter [Actinobacillus ureae
ATCC 25976]
gi|322120577|gb|EFX92477.1| DMT superfamily drug/metabolite transporter [Actinobacillus ureae
ATCC 25976]
Length = 305
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 92/297 (30%), Gaps = 20/297 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G + A WG + + L + + + R W + A +++
Sbjct: 1 MQANIRLGYTSLILATAFWGGNFVLGKLLSNVIEPITLTYLR--WFPALIILACLFYRPT 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ L + + L + + L + V PV+ +FL +
Sbjct: 59 VKALPVIETSKTLIWSLGMLG--VVLFPATLYQGLKSTSALNAGLYLAVVPVLVLFLNLL 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFAR 185
F KE++ + ALL ++ + + G + C R
Sbjct: 117 FFKEKIKLIIFSGALLSLVGVTWLLSQGNLTRLAQLEINRGDLWTIASAVSWAIYCCIIR 176
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG---EHFFLGNIPDTLFLIGYGLLNSF 242
+ S+ F + LA+ L + F L +
Sbjct: 177 QRPSGISNTAFLTALVGLAVLTLTPLFLYEFWQISAKTLQNLTTYQWLGVAYLVLGPSIL 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++YGI + +M PL ++ S+ +L + I + I ++ +++
Sbjct: 237 SYAFWNYGIAIIGSAKAAVMTNFTPLFAVLFSILLLNEAIYSFHIISAILITAGVLI 293
>gi|299145093|ref|ZP_07038161.1| integral membrane protein domain protein [Bacteroides sp. 3_1_23]
gi|298515584|gb|EFI39465.1| integral membrane protein domain protein [Bacteroides sp. 3_1_23]
Length = 298
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 94/284 (33%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R L + G++
Sbjct: 10 LIAILTVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVI-------SPKRLFAG 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q +F P+++ L + E+
Sbjct: 63 NWKDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKAT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I ++L ++ + ++ + L + + + + T +
Sbjct: 123 KGLIYGSILALIGVGLVVFNGSFVLKLSPVGDLLTLLAALSWAFYSLVIKKMTGRYPTVF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + L + + L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFLLHPLQPDFDVLLKPVVLSNLLFLAVLASLVCYVLWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y PL+ +V+SV IL + I + + G ++ +
Sbjct: 243 GTVRASNYIYLNPLVTMVASVIILHEQITWITLLGAGCIIFGVY 286
>gi|295110565|emb|CBL24518.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Ruminococcus obeum A2-162]
Length = 306
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/288 (10%), Positives = 76/288 (26%), Gaps = 11/288 (3%)
Query: 28 LFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG-----LSLL 81
L + +WG+ + + ++ + + R L + I
Sbjct: 13 LLLLLTATIWGVAFVAQSVSMDYIGGFTFNAVRNLIGALTLLPVIKVLDKTHSEAEKKRE 72
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + +L + F + + F +I +G K+
Sbjct: 73 SSASGRKTLLIGGICCGIMLCLASNFQQFGIKYTTVGKAGFITACYIIIVPIIGIFLKKK 132
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ I L + L+ G L L I + +G
Sbjct: 133 CSPFIWIAVLLSLCGLYLLCLTPGEGLAVGKGELLLIICAVLFSGHILVIDHFSPLVDGV 192
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + V + L + + + + G K
Sbjct: 193 KMSCIQFLVCGILSGVPALLFEHPNLSGILAAWLPILYAGVMSSGVAYTLQIVGQKNMNP 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ + +++ IL Q + + ++ A+++ LP
Sbjct: 253 TVASLILSLESCISVLAGWIILGQHLSSREIFGCVLMFGAIILAQLPQ 300
>gi|254882745|ref|ZP_05255455.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|319643949|ref|ZP_07998524.1| hypothetical protein HMPREF9011_04127 [Bacteroides sp. 3_1_40A]
gi|254835538|gb|EET15847.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|317384473|gb|EFV65440.1| hypothetical protein HMPREF9011_04127 [Bacteroides sp. 3_1_40A]
Length = 308
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 91/304 (29%), Gaps = 20/304 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ G L + A I+WG+ + +S L + + R+ + A ++
Sbjct: 1 MAIQKYKGHLALLGAAIMWGLMSPIGKTALENGISGLSLATFRMTGGAICFWIASIFAPK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +K + + + ++ G F + L S P+ ++ + +
Sbjct: 61 ------EQVKPHDLMMLFFAGLLGIVLNQGCFTFGLSLTSPIDASIVTTTAPIATMIVAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFA 184
++LKE + ++I L + L + L S G L LA
Sbjct: 115 IYLKEPVTGKKVIGIFLGSIGALTLILSSQGSTDGKGGSIPGDLLCLLAQISFSFYLAIF 174
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ I + M A ++ S + +
Sbjct: 175 KGLISRYNIFTLMKWMFTYAAICFIPFSYHEVSTIHFHEISTSTWACVAYVIVGGTFLAY 234
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G K + + + + Y P++ S+ + + I +V + +
Sbjct: 235 ILMMIGQKTLRPTVISMYNYVQPIVGTSVSILLGMGTFGVAKGIAVALVFTGVYIVTQSK 294
Query: 305 VINS 308
Sbjct: 295 SREQ 298
>gi|237746367|ref|ZP_04576847.1| integral membrane protein [Oxalobacter formigenes HOxBLS]
gi|229377718|gb|EEO27809.1| integral membrane protein [Oxalobacter formigenes HOxBLS]
Length = 313
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 103/304 (33%), Gaps = 16/304 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ GT+ A + +G PL FL E ++ V+ +R L + + ++ +
Sbjct: 4 KLKGTICGVVAAVSYGTNPLGALFLYGEGINAHSVLFYRFLLAGVVLAVLMLARRESFRV 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K L +L + A+ + + S FV PV+ + +VF +
Sbjct: 64 AKRELS------ILCMLGVLFAISSLSLFISFHYMDAGVASTLLFVYPVMVAVMMAVFFR 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+++ + + + LL + + ++ G L + + + + I V + +
Sbjct: 118 EKVSRVTVFSILLALTGIGLLYQGDGGGTLSTAGVLLVMLSSFSYALYIIVVNKSSLTMS 177
Query: 200 MCVLAIPALFYVVWNGFSG-------GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L L + V + + + + + ++
Sbjct: 178 PVKLTFYVLLFCVMTVGAHSLLDAKDHVQWLATPAMWGFAWMLALVPTVISLVMMVVAVQ 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ IM PL ++ V + + + +++ A+++ + + + +
Sbjct: 238 LIGSTPTAIMGALEPLTAVIIGVTVFGENVTVRLAAGIALILAAVILIIAGKSFSLRQIR 297
Query: 313 TKKS 316
+ +
Sbjct: 298 SAIA 301
>gi|228987676|ref|ZP_04147788.1| Permease of the drug/metabolite transporter [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228772061|gb|EEM20515.1| Permease of the drug/metabolite transporter [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 307
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 90/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S +L
Sbjct: 14 YVMMLFVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTSL 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 70 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 129
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 130 KVGISLILSLIGVIVVITSGSMNTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 189
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 190 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 249
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 250 LGASKASMYLNLTPIVATGISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 306
>gi|52079708|ref|YP_078499.1| membrane protein YoaV [Bacillus licheniformis ATCC 14580]
gi|52785074|ref|YP_090903.1| YoaV [Bacillus licheniformis ATCC 14580]
gi|52002919|gb|AAU22861.1| conserved membrane protein YoaV [Bacillus licheniformis ATCC 14580]
gi|52347576|gb|AAU40210.1| YoaV [Bacillus licheniformis ATCC 14580]
Length = 290
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 90/286 (31%), Gaps = 15/286 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + ++WG T + + + + + + R+ +F ++ S+ K+ +
Sbjct: 5 LLGIISVTLIWGYTWVTMKIAITDIPPVLFSALRLFIGAVPLFVILLIKGRKRSIGKENI 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +L+ + + +G + P+ + L E++N
Sbjct: 65 KHYLVMSLLMGLGYMGVLTYGMQFVDSGKTSV-----LVYTMPIFVTVISHFKLNEKINV 119
Query: 146 LQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+++ ++ LL + L L A++W K +
Sbjct: 120 YKMLGLFSGLIGLLFILGGGILHVDQNVIFGELCVLIAALSWGVANVYSKLKFKNTDMIH 179
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+L + + N L + F I+ + + + +
Sbjct: 180 MNAWQLLTGAVMLLIFSFILEPSRPIHWSNEAILSLLFNGLFSTALTFVIWFWILNQIEA 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
S + P+L ++ L +P+ I ++ I + +
Sbjct: 240 SKASMALMFVPVLGLLFGWLQLHEPVTFSILIGAFMICIGIFMNTY 285
>gi|75760073|ref|ZP_00740136.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74492423|gb|EAO55576.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 316
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 98/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFLLSGVMLLFFFKVLGKN 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 FLKER-LNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
K+ LN ++I + +++ ++ H GI L L A +Y
Sbjct: 129 VYKDDALNMRKLIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFSVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
>gi|254282003|ref|ZP_04956971.1| transporter, drug/metabolite exporter family [gamma proteobacterium
NOR51-B]
gi|219678206|gb|EED34555.1| transporter, drug/metabolite exporter family [gamma proteobacterium
NOR51-B]
Length = 280
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/278 (11%), Positives = 78/278 (28%), Gaps = 16/278 (5%)
Query: 30 VFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + + + + + ++++I R L S+ F I
Sbjct: 1 MILSALGFALMGALVKTAGDLGIPLMQIIFARALVSVLLSLFDI--------RRVSIHPL 52
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
G+L+ + YA+LT + ++ P+ + L + L E
Sbjct: 53 GTQRGLLLIRGLVGFASLSCVYYAVLTLSYAEATVLQYMHPLFTTVLALLLLGEYPTRRT 112
Query: 148 IIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ + LL+M L G A A V
Sbjct: 113 LTCVVFSFAGLLVMALPGLSFGGVGGLPPWGVAAGLAGAAGSGLAYTIVRKLARSEHPSV 172
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ + + + G F L + L L+G G + ++ S
Sbjct: 173 IVLYFPMVCIPGSLILGWNAFVLPDTTGLLVLLGVGCFTQLGQVALTRAMQVETASRNTS 232
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y + + + + + +++ +
Sbjct: 233 LSYIQIVFAALLGFWFFGETPNYETMAGIVLILAGAGI 270
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 35/106 (33%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M ++ AL V+ + F L+ GL+ Y + +
Sbjct: 26 MQIIFARALVSVLLSLFDIRRVSIHPLGTQRGLLLIRGLVGFASLSCVYYAVLTLSYAEA 85
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++Y PL V ++ +L + ++V LP +
Sbjct: 86 TVLQYMHPLFTTVLALLLLGEYPTRRTLTCVVFSFAGLLVMALPGL 131
>gi|62259140|gb|AAX77843.1| unknown protein [synthetic construct]
Length = 329
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 94/299 (31%), Gaps = 20/299 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
L +F I WG+T + L +S ++ R+ S I+
Sbjct: 30 QRKAILALFIVTIFWGVTFPLIKISLAYISPGLFVAIRLSLSCLLFLPLILRAK------ 83
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ + + F + L T ++F ++ V+ F+GS+F +
Sbjct: 84 --FNNKLYLLKVGAIFGSLEGLSFYFQTHGLYTVSSSQSAFLTALSVVMIPFIGSLFKVD 141
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF----------ARKTIPVG 191
RL IIA+ + ++ + ++ S + A + RK
Sbjct: 142 RLTIYGIIASCVSLIGIYALSGASFDNFTIGYLWSVLCALMYAVSVVYLSYETRKDHRSE 201
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + + + + S + I + + +Y
Sbjct: 202 AFRDLRLLIILQIAFGIPLPLITDISSFIYLHFNYILIIALTFCAISTITCYYLQNTY-Q 260
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
K +S V ++ P+ + I + I I +++ + + + K
Sbjct: 261 KHLSMSQVAVIFSFEPIFATIFGKLINNEKIYLSTIIGGTLILTSYFIIEIGNRKRQSK 319
>gi|125973399|ref|YP_001037309.1| hypothetical protein Cthe_0882 [Clostridium thermocellum ATCC
27405]
gi|256004375|ref|ZP_05429356.1| protein of unknown function DUF6 transmembrane [Clostridium
thermocellum DSM 2360]
gi|281417601|ref|ZP_06248621.1| protein of unknown function DUF6 transmembrane [Clostridium
thermocellum JW20]
gi|125713624|gb|ABN52116.1| protein of unknown function DUF6, transmembrane [Clostridium
thermocellum ATCC 27405]
gi|255991659|gb|EEU01760.1| protein of unknown function DUF6 transmembrane [Clostridium
thermocellum DSM 2360]
gi|281409003|gb|EFB39261.1| protein of unknown function DUF6 transmembrane [Clostridium
thermocellum JW20]
gi|316940367|gb|ADU74401.1| protein of unknown function DUF6 transmembrane [Clostridium
thermocellum DSM 1313]
Length = 296
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 89/292 (30%), Gaps = 12/292 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G LF+ + + + ++ + +V ++ R +F ++ +K
Sbjct: 7 GYLFILVTVVFFSTYEVVSKTIIGKVDPFQINFLRFFIGGSLLFLFLLI----KRDVKID 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K+ V + +++ + + + + + P+ +V KE++
Sbjct: 63 RKSLMIVSAAGILNVVFSMNLLQLSLNVAYAKAAVVAVIFSSNPIFVSIFAAVMDKEKIT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSEGFF 197
+ L +L + +++++ ++ +
Sbjct: 123 LFKAAGMFLGMLGIAVISINGQAFRDINILSPLLALMSAGLYGLYTVVGRRASSKIGSIK 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ I +L + G F + + + I+ G+ R
Sbjct: 183 MNAYSFLIGSLILLSVLLIKGLPAFKFDCSAWPQVVYLSVFVTGIAYLIYFMGLVRTGAG 242
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + P+L V ++ L + I ++++ M V I
Sbjct: 243 SGSVVFFLKPVLASVFAIVFLGEKITLNLIFGTFLILLGMAVMFYWEKIRQR 294
>gi|321313488|ref|YP_004205775.1| putative transporter [Bacillus subtilis BSn5]
gi|320019762|gb|ADV94748.1| putative transporter [Bacillus subtilis BSn5]
Length = 311
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 95/292 (32%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S + + + +++G +++ + E++ R L + + +
Sbjct: 8 SSKQKSTAVIKMVISMVIFGSIGFFSEH-TNLPSFELVFVRCLCATLFLGLCWLASGQYK 66
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + V + L +W F + + Y + PV+ + LGS
Sbjct: 67 TEKW----SKRDVLQTLVCGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSFL 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--- 195
+E+LN + + + ++ L +++ +G L+ + A + G
Sbjct: 123 YREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGSGIIWAVLAALFYAFTTLLGKGI 182
Query: 196 ---FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L ++ G L + + + V+ +F ++
Sbjct: 183 HNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDSLR 242
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ + P + IV D +T+ ++ M + L+
Sbjct: 243 FLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRR 294
>gi|295696023|ref|YP_003589261.1| protein of unknown function DUF6 transmembrane [Bacillus tusciae
DSM 2912]
gi|295411625|gb|ADG06117.1| protein of unknown function DUF6 transmembrane [Bacillus tusciae
DSM 2912]
Length = 321
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 14/287 (4%)
Query: 35 ILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ W + L S V+ R L + + + + +
Sbjct: 28 VFWSSAFAGIRAALLSGYSPGHVVLLRFLSASAVFVVYALVRGIQVP------RGRDLLA 81
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ T ++++ + LT S P + + + L ERLN + + L
Sbjct: 82 VAALGWTGISIYHIALTFGELTVDAGTASLLIAAAPAFTALIAVIALGERLNGIGWLGVL 141
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF------IEMCVLAIP 206
+ + +MT+ SG A A VG F +
Sbjct: 142 VGFGGVALMTVGSGGGHRVTAGAWLILLSAVTAAIFFVGQKPLFARYGAIDLTAWFTWFG 201
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
L + + G + + + + ++ +K A V Y
Sbjct: 202 TLPMLWFAPGLGEAMAHASGAATWVCVYIGVFPAAVAYVAWAIALKSAPAGLVASSLYLN 261
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
PLL I+ L + + I V +V+ + + + +
Sbjct: 262 PLLAILIGWVWLGELPGVWSILGGVIAVAGVVMVNVAGPVRRQRFRA 308
>gi|313203844|ref|YP_004042501.1| hypothetical protein Palpr_1370 [Paludibacter propionicigenes WB4]
gi|312443160|gb|ADQ79516.1| protein of unknown function DUF6 transmembrane [Paludibacter
propionicigenes WB4]
Length = 311
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 93/295 (31%), Gaps = 15/295 (5%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
G+S + + +++ L + + + + L +S +R+ + G+
Sbjct: 21 GVSPPSKNAGSIIHYLLLLFGVFCIAWSAILVK-LADISGFGSAFYRMFFGTIGIIPVWF 79
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
YF + + K V + + + A + +++ + +++ + PV
Sbjct: 80 YFKKPI-------TDRKGVKIAIICGILFACDIALWNTSIMLSKATISTLLANLAPVWVG 132
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFAR 185
+F+KE+ + + + ++ + I+ + + + IA +
Sbjct: 133 IGALLFMKEKPTRIFWVGTAISLVGVTIIIGLNQILEANLNVGSILAIIASMFYGAYLLT 192
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + F L + F+ + + +
Sbjct: 193 VRKGRINLDTFSFTAISTVASTLVLGLICLFTSTPLWGFSTKTWLTLGTLGIVPQLLGWL 252
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + + + + + + SVFIL + + +V+ + +
Sbjct: 253 AINQALGHIRPTVASVSLLSQTVFTAIFSVFILGEVLTVHEIGGALVVLAGIYLV 307
Score = 36.4 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 12/152 (7%), Positives = 51/152 (33%), Gaps = 3/152 (1%)
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ L L + + ++G + L + ++ + + GF + +
Sbjct: 14 SVPLQGLGVSPPSKNAGSIIHYLLLLFGVFCIAWSAILVKLADISGFGSAFYRMFFGTIG 73
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + + + + ++ I +K + ++ AP+
Sbjct: 74 IIPVWFYFKKPITDRKGVKIAIICGILFACDIAL---WNTSIMLSKATISTLLANLAPVW 130
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + ++ +K+ + + I ++ + + +
Sbjct: 131 VGIGALLFMKEKPTRIFWVGTAISLVGVTIII 162
>gi|309781127|ref|ZP_07675865.1| membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308920193|gb|EFP65852.1| membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 311
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 92/287 (32%), Gaps = 14/287 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G L + + +G ++T + +V+ ++ R + + + + G+
Sbjct: 16 KLLGVLLIAVSAASFGAMAIFTHYAYASGANVVGLLIVRFVIAAAALMVVMRVRRIGIPP 75
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G+ A F AL L + ++ P+ L ++FL+
Sbjct: 76 WSR------VAGLAAMGGIGYAGQSFAFFTALNYAPASLVALLLYLYPMFVTVLAAIFLR 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV------GSSE 194
ERL IIA +L + + +G+ SL A +
Sbjct: 130 ERLTTTAIIALVLCSVGAGLTVGGAGLSGGSLLGIGLGVASAVIYSIYITVGARVTRGLD 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ Y H L GL F G+++
Sbjct: 190 PLACTTVICTAAAVVYTGMALLGAPAHLPGTFSGWAAALAIAGLSTVVAILTFFAGLQKL 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ P++ ++ + +L + I ++ +++ ++
Sbjct: 250 GAAQASMLSTLEPVVTVLLAALLLGESIAPMQVTGGALILAGVLWLT 296
>gi|300119036|ref|ZP_07056747.1| EamA family protein [Bacillus cereus SJ1]
gi|298723652|gb|EFI64383.1| EamA family protein [Bacillus cereus SJ1]
Length = 316
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 97/299 (32%), Gaps = 21/299 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 LIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVVLVNVPSDVSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAIFMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|296501236|ref|YP_003662936.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
gi|296322288|gb|ADH05216.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
Length = 316
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 97/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGFMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNMRKIIGVSIGFCGVVLVNMPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V +
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTSAKQK 308
>gi|254993751|ref|ZP_05275941.1| hypothetical protein LmonocytoFSL_12783 [Listeria monocytogenes FSL
J2-064]
Length = 227
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN + G + AY+ WG+ P+Y + + V +E++++R++WS + F IV
Sbjct: 1 MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYRIIWSFIFMLFLIVCLR 60
Query: 76 G---GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
KD L PK + ++ +A ++ +W FIY + + S Y++ P+++V
Sbjct: 61 KASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNSGHVTEASLGYYINPLVNV 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVG 191
L +V LKERL+ +IIA + + +LI+T H +P ++ +AVT+S Y +K + V
Sbjct: 121 LLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAAIGMAVTFSLYGLIKKVVSVS 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
G +E ++ AL YV++ +G +
Sbjct: 181 VWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNIIL 219
>gi|228943636|ref|ZP_04106060.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228976112|ref|ZP_04136616.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228983191|ref|ZP_04143433.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis Bt407]
gi|228776537|gb|EEM24862.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis Bt407]
gi|228783606|gb|EEM31681.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228816034|gb|EEM62235.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 310
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLFITIPSKSADQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALVEILYYGLPKIETWKTGLSVIYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 244 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGV 288
Score = 40.7 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKQLQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGAIGVLFITIPS 143
>gi|126650180|ref|ZP_01722413.1| hypothetical protein BB14905_02880 [Bacillus sp. B14905]
gi|126593352|gb|EAZ87314.1| hypothetical protein BB14905_02880 [Bacillus sp. B14905]
Length = 284
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/288 (17%), Positives = 102/288 (35%), Gaps = 12/288 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M G L + I++G ++ +++ S E+ L + +Y L+
Sbjct: 1 MSGKLAFVLSMIIFGAVGVFAKYIPLFSS-EIAFWMSLIGACFLIVIFIYIKESLTKRSI 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + S+ L +W F A + SY+ PV+ + L + LKE+L
Sbjct: 60 LKNKWRLIL----SSVALCGNWIFLFQAYKETTIANAALSYYFAPVLVICLSPIVLKEKL 115
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGF 196
+I+ + I L ++ G I A + G E
Sbjct: 116 VSRKILYVCVAIFGLFLIVQSQGTGDSKHFIGIVYGLIAACFYTALTFTNKCICGLKEPE 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + G +G + L L + + F +F +G+ + K
Sbjct: 176 NTIIQLSLAAFFLCFYLLGTTGFQVMTLSFKSVLLLMTLGIVHAGVGFLLFFWGMSKLKG 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ I+ Y PL +V S I+ + + ++ I +++ + ++ L
Sbjct: 236 QSIAILSYIDPLTSLVISTMIIGEKMTLLQIIGAVLLLGSTLLSELEK 283
>gi|331665293|ref|ZP_08366194.1| putative permease transporter [Escherichia coli TA143]
gi|331057803|gb|EGI29789.1| putative permease transporter [Escherichia coli TA143]
Length = 307
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYAGQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|315497424|ref|YP_004086228.1| rard protein, dmt superfamily transporter [Asticcacaulis
excentricus CB 48]
gi|315415436|gb|ADU12077.1| RarD protein, DMT superfamily transporter [Asticcacaulis
excentricus CB 48]
Length = 305
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 112/289 (38%), Gaps = 4/289 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
Y +WG PL ++ LE+++HR +W+L ++ +
Sbjct: 18 IGLAILCYAVWGFAPLVYLPMKDFGAGALEIMAHRSVWALIWSGGLVLITRQ-FPEVLTI 76
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ PK L+ +A ++A++WG F++A+ ++ Y++ P++++ G++ KERL+
Sbjct: 77 FRTPKVALTLLVAAVMIAINWGVFVWAVTNHHTIESALGYYLNPLLNMAAGAILFKERLD 136
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A L I+ + I L G A + S+ CV
Sbjct: 137 NWGKAAIGLAIVGVGIQALALGHVPFIALTLALSFATYGIIRKQLAVSALAGLFVECVFL 196
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ G+ F G + + G + +FSY +R LST+G +++
Sbjct: 197 FVPSIIYLVWFEGTGQGHFFGGLSHAFWFALTGPVTVLPLFLFSYVARRLPLSTMGFIQF 256
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
AP + + + +R + F + V+ + + +
Sbjct: 257 MAPTIAFMIG-LFQGELFTPLRALSFAFIWFGAGVFAFGAWRRAKQMRV 304
>gi|239627722|ref|ZP_04670753.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517868|gb|EEQ57734.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 89/282 (31%), Gaps = 10/282 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++ ++ ++ Q + +R++W++ + + L T +
Sbjct: 9 LIMIVIGIAGISLSAIFVKY-SQAPSVVTAFYRLMWTVVLMTPVVFGRGESRRELMGTDR 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ S LA+H+ + +L ++ + +FLK R++
Sbjct: 68 KSVL--LCALSGLFLAMHFTTWFESLNKTSVASSTAIVCTEVIWVAIGYCLFLKGRISLA 125
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGFFIE 199
+ + + L++ + + A + A G
Sbjct: 126 AAGSIFVTVGGSLLIAFSDYSAGGNHLLGDMLALAAAVFCAVYTLIGRQARGHMSTTVYT 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V AL + SG G + L+ IFS+ +K S V
Sbjct: 186 YIVYVFCALALGIATAASGLAFTGYGARSVIVGLLLSVCSTLLGHSIFSWCLKFLSPSFV 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P + V ++F+ + ++ + + +++Y
Sbjct: 246 SASKLCEPAVAAVIALFVFGEVPAPLQIAGGAVTIGGVLLYS 287
>gi|219815977|gb|ACL37095.1| putative transmembrane protein [uncultured bacterium fCS1]
Length = 301
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 85/298 (28%), Gaps = 8/298 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + G A + T+++ V +L + R L+ ++ G
Sbjct: 3 TSRKALAGIALGIAAVACFATLDTTTKWVTGSVPLLMALWFRYLFQALATTLTVLPRRGR 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + + +L F +L + +TP++ L +
Sbjct: 63 ALLRTEHPR------FHLARGVLLLASSLFAFLSLKYMPVGEFTAIVMITPLVVTLLSAR 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER++ L+++ L++ G + A +
Sbjct: 117 MLGERVSALRMLLVAGAFAGTLVIVRPGGQDFNWTLLLPLALVAVNAAFQLLTSRMTRTE 176
Query: 198 -IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ ++ + +G+ L L G + + +RA
Sbjct: 177 DPMTLQFYTGWVGTLIASLPLPWVWAEIGSPQLWLGLAVMGATATLGHFLLILAFQRAPA 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+T+ YT ++ + D + ++ + +V S + +
Sbjct: 237 ATLMPYMYTQIGFAMLGGWLMFSHVPDHWSVLGIALIALCGAAGAFLSVRESRRTSLR 294
>gi|206974998|ref|ZP_03235913.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|206747017|gb|EDZ58409.1| transporter, EamA family [Bacillus cereus H3081.97]
Length = 301
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKKTS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 62 KQHIKQSSL----AGLTVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 118 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 178 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 296
>gi|46199599|ref|YP_005266.1| transporter [Thermus thermophilus HB27]
gi|46197225|gb|AAS81639.1| transporter [Thermus thermophilus HB27]
Length = 277
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 81/269 (30%), Gaps = 10/269 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MG +V A LWG+ ++ E ++ L V +R L S G
Sbjct: 1 MGYFYVLLAAFLWGLIGPLSRMAFQEGLTPLTVAFYRALLSWIFFLAHAARTGGLR---- 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +F +A+ +G + A+L L S + P L FL+E
Sbjct: 57 --VAPRDLPVFPLFGLLGVALFYGAYQLAVLYGGAALASVLLYTAPAWVALLSWAFLREP 114
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA--YCFARKTIPVGSSEGFFIEM 200
A L +L + ++ L G + A + F +G
Sbjct: 115 PTARSWGAVALTLLGVGLLGLGGGSEVRFGVRAFLFGLASGFFYALHYLLGKLYLGRYAT 174
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
AL E L L + F G++R +
Sbjct: 175 PTFFAYALPVAALALAPWAEFGPLTPRALGALLALSLFSTYGAYLAFYAGLRRLPATVAS 234
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
++ P++ +V + + + + +
Sbjct: 235 VVATLEPVVAVVLAYLLFGEVLSPLGYFG 263
>gi|325282040|ref|YP_004254582.1| hypothetical protein Odosp_3450 [Odoribacter splanchnicus DSM
20712]
gi|324313849|gb|ADY34402.1| protein of unknown function DUF6 transmembrane [Odoribacter
splanchnicus DSM 20712]
Length = 311
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 96/297 (32%), Gaps = 24/297 (8%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + A ++WG+ +F+ V+ L V R+ ++ + A +
Sbjct: 5 KLKGHSSMLGANVMWGLMSPVAKFVMVGGAVTPLVVTDLRITGAMVLFWIASFFQKPER- 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +L S + + G FI+ + S P++++ L +++L
Sbjct: 64 -----VAPKDLLKLLGASLLAIVFNQGCFIFGVGLTSPVDASIITTSMPLLAMVLAAIYL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA---------------YCFA 184
KE + +++ + L++ L S + A + +
Sbjct: 119 KEPITGKKVLGIAVGATGALLLILGSHQVSEAKAAGNHYIWGDLLVLLAQFSYALYFVLF 178
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + S M A +N E L N + +
Sbjct: 179 KNFVNKYSLITIMKWMFTYAFICALPFSYNDLLHTEWKSLQNTEIGALVFIVVGSTFISY 238
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ G K + + G+ Y PL+ + +V + V+ I ++ + +
Sbjct: 239 VLIVIGQKNLRPTVAGMYNYVQPLVASIVAVCWGMDTFNFVKIISVALIFGGVYLVT 295
Score = 38.4 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 40/133 (30%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+ A + + + L I + W + +
Sbjct: 12 MLGANVMWGLMSPVAKFVMVGGAVTPLVVTDLRITGAMVLFWIASFFQKPERVAPKDLLK 71
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
L L F F +G+ I+ + PLL +V + LK+PI + +
Sbjct: 72 LLGASLLAIVFNQGCFIFGVGLTSPVDASIITTSMPLLAMVLAAIYLKEPITGKKVLGIA 131
Query: 292 IVVIAMVVYLLPT 304
+ ++ +L +
Sbjct: 132 VGATGALLLILGS 144
>gi|228953378|ref|ZP_04115424.1| Transporter, EamA [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228806275|gb|EEM52848.1| Transporter, EamA [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 309
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINLMQLVGGLIIFIGLYVVKKGGMKK 300
>gi|229018372|ref|ZP_04175242.1| Transporter, EamA [Bacillus cereus AH1273]
gi|229024602|ref|ZP_04181047.1| Transporter, EamA [Bacillus cereus AH1272]
gi|228736667|gb|EEL87217.1| Transporter, EamA [Bacillus cereus AH1272]
gi|228742961|gb|EEL93091.1| Transporter, EamA [Bacillus cereus AH1273]
Length = 309
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 91/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIIAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIVFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|226356282|ref|YP_002786022.1| hypothetical protein Deide_13300 [Deinococcus deserti VCD115]
gi|226318272|gb|ACO46268.1| Conserved hypothetical protein; putative membrane protein
[Deinococcus deserti VCD115]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 88/281 (31%), Gaps = 10/281 (3%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +LWG+ + + V LEV R L
Sbjct: 17 LLILAAAVLWGLLGILGKQAQAAGVGALEVAFWRAALGGGLFALHAALTRSPLP------ 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + F ++V + + A+ L S + P LG L+ERL
Sbjct: 71 RGRDLLVTVGFGVVGVSVFYAAYQLAVQAGGASLASVLLYTAPAFVALLGWALLRERLGR 130
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC--FARKTIPVGSSEGFFIEMCVL 203
+ +A + + +++L G + A A+ + G + L
Sbjct: 131 REGVAVAGTLGGITLISLGGGQGVNVTAAALAFGLLSGLTYSLYYLYGKAYFDRYAPTAL 190
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL E + L + +S G++R + ++
Sbjct: 191 YAVALPVGALGLVPFVEWAPKTGAAWSSLGAMAVLSTYLAYLAYSAGLRRLPATRASVIA 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P++ + + + + + + + +V+ A ++ +
Sbjct: 251 SLEPVVAALLAAVLFAEQLSALALLGAALVIGAALILSVEK 291
>gi|188495737|ref|ZP_03003007.1| carboxylate/amino acid/amine transporter [Escherichia coli 53638]
gi|218702494|ref|YP_002410123.1| hypothetical protein ECIAI39_4249 [Escherichia coli IAI39]
gi|300939308|ref|ZP_07153982.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 21-1]
gi|331685387|ref|ZP_08385973.1| putative permease transporter [Escherichia coli H299]
gi|188490936|gb|EDU66039.1| carboxylate/amino acid/amine transporter [Escherichia coli 53638]
gi|218372480|emb|CAR20356.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
gi|300455815|gb|EFK19308.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 21-1]
gi|331077758|gb|EGI48970.1| putative permease transporter [Escherichia coli H299]
Length = 307
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|148643013|ref|YP_001273526.1| hypothetical protein Msm_0953 [Methanobrevibacter smithii ATCC
35061]
gi|148552030|gb|ABQ87158.1| conserved hypothetical membrane protein Msm_0953
[Methanobrevibacter smithii ATCC 35061]
Length = 299
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 86/293 (29%), Gaps = 9/293 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
L A I++G + ++ + L + ++ R + +F ++ L +K
Sbjct: 6 FLLPALAGIMFGSSGIFVRTLTENGIDPTTLLFLRFSIAAVVMFVCVLLTDKSLFKIKKE 65
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + L + L L + FV LG +++
Sbjct: 66 YLPYFIIAAISIVGLNLCYNEAMNSIHLSLAAVLLGTSPIFVIIGAYFTLGEKITVKKIG 125
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + I+ S + + I L+ + V + +C C+L
Sbjct: 126 SMFLAIVGCILASGFLESSIGSISLIGVLGGVGAAIFCAVYTLDSTKVINKGCHTYCILF 185
Query: 205 IPALFYVVWNGFS------GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V+ ++ + + + + + +
Sbjct: 186 YSLILIVILLLPFTNFGQINHYVNVNQLSNVLFLILHSFISFALPYICLTTALNYVESGV 245
Query: 259 VGIMEY-TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ P+ ++ + + + IV++A+V+ P+ K
Sbjct: 246 ASILLSGCEPIAALIFGIICYFEIPTVLMLCGLVIVIVALVILCKPSKKEEVK 298
>gi|85702788|ref|ZP_01033892.1| membrane protein, putative [Roseovarius sp. 217]
gi|85671716|gb|EAQ26573.1| membrane protein, putative [Roseovarius sp. 217]
Length = 297
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 94/284 (33%), Gaps = 9/284 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A + + + + + ++ E++ +R + V ++ +
Sbjct: 19 LWMLGAVVSFSSMAVAGRAVSFELDTFEIMMYRSIVGFVIVIILARLTGHAATITTRSPG 78
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ F+ L + YA+ F P+ + L + L ERL
Sbjct: 79 THLIRNLCHFAGQNL------WFYAITVIPLAQVFALEFTAPLWVLVLSPLILGERLTRT 132
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ +AA++ + +LI+ S +A +A FA + C+L
Sbjct: 133 RALAAVIGFIGILIVARPSPETFSLGTLAAAAAAIGFAGSILMTKRLTRTESLTCILFWM 192
Query: 207 AL--FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L + L ++ +LI G + + A + + +++
Sbjct: 193 TLVQIILGVLCAGVDGDIALPSLASAPWLILIGCAGLLAHFCLTTALSLAPATLITPVDF 252
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ + + + +P+D + ++ A + + S
Sbjct: 253 LRLPVIAIIGLLVYAEPVDAFVILGAMVIFGANYLNIWRETRKS 296
>gi|320105089|ref|YP_004180680.1| hypothetical protein Isop_3574 [Isosphaera pallida ATCC 43644]
gi|319752371|gb|ADV64131.1| protein of unknown function DUF6 transmembrane [Isosphaera pallida
ATCC 43644]
Length = 313
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 85/293 (29%), Gaps = 15/293 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +WG + +F + V L R L +LP + + L++ +
Sbjct: 18 GLGAAVLCCAIWGGNAVAVKFTVPDVPPLACAGWRFLLALPILVAVCRWTGRPLAVPRAA 77
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L V G F + Q +S V P++ L ++L ER+
Sbjct: 78 WGVMAIHVALT------IVQIGSFNWGTALGQAGRSSVFINVHPLVVAPLAWLWLGERMT 131
Query: 145 HLQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + L + ++ L+ LA + + +K
Sbjct: 132 GRGLAGLIAAALGVAVLVSEPILRGGGSLTGDLIVLASGIVFGCQTVFQKKTFHRIPAPT 191
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + F + G + L +++ F F ++ + R
Sbjct: 192 MLLWQTIGAMPFFLALSWLIDGTVVERYSHQAMLGILYQGIMVSGFCFTVWMILLNRHPA 251
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + PL I +P + +V + + + +
Sbjct: 252 GQLATLAFLTPLFGITFGCLARGEPFTWPLGLGAALVGLGIHLTASGSASARR 304
>gi|212715616|ref|ZP_03323744.1| hypothetical protein BIFCAT_00515 [Bifidobacterium catenulatum DSM
16992]
gi|212660983|gb|EEB21558.1| hypothetical protein BIFCAT_00515 [Bifidobacterium catenulatum DSM
16992]
Length = 331
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/313 (8%), Positives = 84/313 (26%), Gaps = 28/313 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A ++WG + Q ++ + L + R + + +
Sbjct: 1 MQRKEIGGMACLVLAALIWGFAFVSQVQGMDSTTPLFFGATRFTLGSISLIPLLWFRRNT 60
Query: 78 LSLLKDTLKNPKAVGMLV----------------------FSATILAVHWGFFIYALLTR 115
++ + + + + + L +
Sbjct: 61 IAEQERKRRETQGKPSITLGNGAIVAMPKWTGNPIVVSITCGIVLFTASTVQQYGILYSG 120
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-----L 170
+ F + V++ L V L+ R++ II+ + ++ ++ + G +
Sbjct: 121 SAGRSGFITALYIVMTPLLAFVILRRRVHLSVIISVAISVIGFYLLCVTDGFGSITLADM 180
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
L A + + + A+ + + G +
Sbjct: 181 VLLFTAVLFAGHILVIDTFGRGMDPILLSFGQITTTAILSWIGSIIEGSIDWAGAAQSWI 240
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + + G + + ++ V +L + + T I
Sbjct: 241 AIVYTGVCSAGVAYTLQVIGQRLVPPTRASVIMSLESFFSAVGGALLLGEIMTTRAYIGC 300
Query: 291 GIVVIAMVVYLLP 303
++ ++ LP
Sbjct: 301 ALIFAGTILAQLP 313
>gi|254039206|ref|ZP_04873256.1| transporter YijE [Escherichia sp. 1_1_43]
gi|331644681|ref|ZP_08345800.1| hypothetical transport protein YijE [Escherichia coli H736]
gi|409786|gb|AAC43049.1| ORF_o312 [Escherichia coli str. K-12 substr. MG1655]
gi|226838642|gb|EEH70671.1| transporter YijE [Escherichia sp. 1_1_43]
gi|323934433|gb|EGB30846.1| integral membrane protein DUF6 [Escherichia coli E1520]
gi|323939025|gb|EGB35243.1| integral membrane protein [Escherichia coli E482]
gi|323959287|gb|EGB54948.1| integral membrane protein [Escherichia coli H489]
gi|323969696|gb|EGB64980.1| integral membrane protein [Escherichia coli TA007]
gi|331036143|gb|EGI08379.1| hypothetical transport protein YijE [Escherichia coli H736]
Length = 312
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 95/308 (30%), Gaps = 19/308 (6%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLW 62
G K +S S P + + ++W + ++ + + + + + R ++
Sbjct: 2 GERKLHTGSLMSAAGKSNP--LAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIF 59
Query: 63 SLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+F ++ G ++ L + G +AL++ +
Sbjct: 60 GALVLFIVLLLRGRG-------MRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAI 112
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------- 175
+ P V ++FL ERL Q A L+ L ++ + S+ A
Sbjct: 113 LSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSG 172
Query: 176 --VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
SA R + + + AL V
Sbjct: 173 VSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALA 232
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
L + + ++ + +K S + P+ ++ S ++L + V ++
Sbjct: 233 YSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLI 292
Query: 294 VIAMVVYL 301
V+A+ +
Sbjct: 293 VLALALVS 300
>gi|319953173|ref|YP_004164440.1| hypothetical protein Celal_1633 [Cellulophaga algicola DSM 14237]
gi|319421833|gb|ADV48942.1| protein of unknown function DUF6 transmembrane [Cellulophaga
algicola DSM 14237]
Length = 297
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 86/290 (29%), Gaps = 8/290 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE--VISHRVLWSLPGVFFAIVYFSGGL 78
+ G L+V +GI + +F + + + + FS
Sbjct: 2 NNHLKGVLYVGVGAASYGILATFVKFANNNGSGTAGLAFAQYFVGVVVLTLLSFLFSKKN 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ D + K LV + L + F+ ++ + T + V L
Sbjct: 62 TAPTDKKEIRKDKLKLVAFGSFLGLTSSFYYLSIQYIPVSVGIILLMQTIWMGVVLEFFM 121
Query: 139 LKERLNHLQIIAALLIILS------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
++ + +II A +I+ + + L + T +
Sbjct: 122 NRKLVTQKKIIGAGAVIIGTLLAAKIFEVDAALNFKGLIFGLLAALCYTGTLYATSSIAL 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
F L + L + F + +F+ GI
Sbjct: 182 ELPLFTRSKYLILGGLIVTMIFWNVQIIADFDWWVFLKWGTFLGFFGTILPPILFNKGIP 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I+ + ++S+ IL + I +++ + I++I++V L
Sbjct: 242 VIGTGLGSIISALEIPISVMSAYLILHEEISSLQWLGILIILISVVYINL 291
>gi|228969772|ref|ZP_04130537.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228789943|gb|EEM37760.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 313
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 101/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWVLESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KKVPWQRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLFITIPSKSADQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALVEILYYGLPKIETWKTGLSVIYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ I +S+ +L + + + +V+I +
Sbjct: 244 RVSASVSGLYLNALPLISIATSIILLNESLTWRVIMGASLVLIGV 288
Score = 41.0 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWVLESIQPFTLLFIRLFFAGGICMLFSFKQLQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKKVPWQRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGAIGVLFITIPS 143
>gi|260781814|ref|XP_002585994.1| hypothetical protein BRAFLDRAFT_110249 [Branchiostoma floridae]
gi|229271071|gb|EEN42005.1| hypothetical protein BRAFLDRAFT_110249 [Branchiostoma floridae]
Length = 315
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 90/302 (29%), Gaps = 19/302 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + ++ L+ + + + LE+ R L I+Y L +
Sbjct: 19 LGLVCALVSTVFFSLSSLFVKLVWDLHPLEITFFRCAAQLVCALPPIIYKKLPLVPEDTS 78
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ AV YA + F +P+ + LKE
Sbjct: 79 PRLYLLGR-----GVFGAVALCMQFYAFHHIPLGDATTVIFSSPIFIALFAWLILKESYG 133
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAI--------------AVTWSAYCFARKTIPV 190
+ L + +++++ S I + I + +
Sbjct: 134 WFNFVVTLTTLTGVVLISKPSFIFGSVVGIPSTTEHLLGTLSAFGGAVFSALALVMIRKL 193
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + F + + L++ + + GE D +LI GL +
Sbjct: 194 GKTVHFLVHITYLSVFGMILTFVLLVAFGEFRMPPCGSDRYYLIALGLCGVGGQTFLTKA 253
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ K + V I+ + L + + G+V+ + + + + +
Sbjct: 254 FQLEKAAPVAIVRTMDIVFAFTWQFLFLGEIPAPLSVGGAGLVMSSAIAIAVKKCLAERQ 313
Query: 311 NK 312
+
Sbjct: 314 KQ 315
>gi|208435128|ref|YP_002266794.1| hypothetical protein HPG27_1178 [Helicobacter pylori G27]
gi|208433057|gb|ACI27928.1| hypothetical protein HPG27_1178 [Helicobacter pylori G27]
Length = 298
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 98/297 (32%), Gaps = 4/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA + +L T F + + + L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAFFYNIEKISLATATAFSQCAPIYTVLLSPLLLKEK 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K L I ++++S + + ++ ++ + + + +
Sbjct: 121 LKKSALISACIGLVGVVLISDPSVENVGPVEIIMGILSGIFVSLAYITLRDLREYYDKQA 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEH---FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + +L ++ + D L++ G+ + +Y A
Sbjct: 181 VILAFAFGMSLLGLMGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTYAYMNA 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +EYT + ++ +++ +D ++ +++ + ++ LP ++ K
Sbjct: 241 PAGIIAPIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLKELKK 297
>gi|126725582|ref|ZP_01741424.1| hypothetical protein RB2150_05238 [Rhodobacterales bacterium
HTCC2150]
gi|126704786|gb|EBA03877.1| hypothetical protein RB2150_05238 [Rhodobacterales bacterium
HTCC2150]
Length = 299
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 77/283 (27%), Gaps = 5/283 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
PT + + + ++WG + + L V V + R+ + L
Sbjct: 5 PTPLNWVSLIVLGLIWGASFMAVGIALNSVGPFTVAAIRLGLGAVVLLIVAYAMGRRLPK 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L L + + + + G
Sbjct: 65 GRVWLYIIGMGVFTNALPFSLLGWAQQVVPSAFAGVSMAIVPLFVLPLAFLFVPGEKMPP 124
Query: 141 ERLNHLQI----IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ I +A L+ I + + +A A T +
Sbjct: 125 RKIIGFGIGFIGVAILIGIQDINNALAAGDLLPKLACVASAVCYAIGAIITRLAPPTPQI 184
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + A + G + + + + + I+ A
Sbjct: 185 AYSAGGLLVGATISITTALIFEGMPQNIDATAASALIYLAVFPTALATILLVKVIQSAGP 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + ++ Y P+ I+ V L + + + FG+++ +++
Sbjct: 245 SFLSLVNYQVPVWSILFGVLFLGEVLPDYFLLAFGLIIAGVLI 287
>gi|229495453|ref|ZP_04389188.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406]
gi|229317896|gb|EEN83794.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406]
Length = 310
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/285 (14%), Positives = 94/285 (32%), Gaps = 17/285 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVY 73
E + G L + + +G PL+T L + ++++R L++ +F ++Y
Sbjct: 1 MEPTPQHKLRGLLIAGTSSVAFGFIPLFTLPLMAIGLRTPSILTYRFLFAALAMFPLLLY 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L L + +L+ + + + +F PV +
Sbjct: 61 KKIDLRLTAREIG------VLLSLGLVYIASAMGLQLGYHYMPSGVATVVHFTYPVYVIL 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFA 184
L +F ++R + I+A LL L +L ++ + + + +++Y
Sbjct: 115 LMLLFYRQRPTRIMILAILLAFLGVLCLSGLGLEKVDRRFLIGMLIVAPTGLAYASYMVI 174
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
V + + L ++V F GG L + +
Sbjct: 175 VNKSVVRTMNNIKLSFYALLACGSGFLVIALFWGGLQGIPSLEAWGLTIALAIIPTVVAN 234
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
G+K + I+ PL +V + + + +R +
Sbjct: 235 ITLVEGVKLIGSTMSAILGALEPLTAVVIGFLVFDEVLTPLRLVG 279
>gi|229137635|ref|ZP_04266241.1| Transporter, EamA [Bacillus cereus BDRD-ST26]
gi|228645861|gb|EEL02089.1| Transporter, EamA [Bacillus cereus BDRD-ST26]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNVGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQILGTMIVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|229161361|ref|ZP_04289346.1| Transporter, Drug/metabolite exporter [Bacillus cereus R309803]
gi|228622175|gb|EEK79016.1| Transporter, Drug/metabolite exporter [Bacillus cereus R309803]
Length = 295
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 96/297 (32%), Gaps = 10/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +F + ++ + L + + +R+L++ + ++ +
Sbjct: 2 KSSTLSYFILFFGVFALSTSAIFVK-LAAAPAVIIAFYRLLFAAIILLPFLICNKNNRNE 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK K G + S LA H+ + +L ++ + P+ S+ G K
Sbjct: 61 LKTLTKKQWRFGFI--SGLFLAAHYVLWFESLRYTSVASSTVIVTLQPLFSMIGGYFLFK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
ER +I + I +++ + IA F
Sbjct: 119 ERFTKGAVIGCFIAISGSIVIGWQDFQISGEALYGDILAFIAAGIITAYFFISQHVRKDL 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ A F ++ F F+ + IF++ +K
Sbjct: 179 SLIPYSVISYGSSACFLGIFAYMQQESFFHYSTQTWLSFIGLAFIATILGQTIFNWLLKW 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + + + + FIL + I +++ ++ I + ++LL + + K
Sbjct: 239 MSTTVISMSILGETIGTCILAYFILNETISLQQSLGISLIFIGLALFLLQPKLPNHK 295
>gi|322374099|ref|ZP_08048633.1| putative integral membrane protein DUF6 [Streptococcus sp. C150]
gi|321277065|gb|EFX54136.1| putative integral membrane protein DUF6 [Streptococcus sp. C150]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 92/288 (31%), Gaps = 12/288 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + I G + ++L E L + R + + + + S++
Sbjct: 10 VISILLTTIFMGSSFPTGKYLIAVENTPPLLIGGVRFIIAGVIMLGLTIINRNCFSIIPK 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTR---QGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ LV + +L L ++S F P+ L FLK
Sbjct: 70 SGESKLRGLALVATIGLLQTAGTMGFLNLALAYGVSSSMSSIILFTNPLWLALLAHFFLK 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG----- 195
++L ++ A LL I + ++ ++C++ TI
Sbjct: 130 DKLTFKKVSALLLGIAGVSTCIGLDSTAFNFGSLFALLGSFCWSINTIITKKVPFDNGPW 189
Query: 196 -FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F +L L+ G + LG F+ + F ++ + + +
Sbjct: 190 VFTGWQLLLGGVFLYLFSLPLHEGYDFLNLGLWGWIWFVWLIIPASVGSFGLWFFSLGQK 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + P+ + S+ L + I +VV A+V+
Sbjct: 250 GATVASSFLFLVPVFSTIFSIIGLHEKFSLNLLIGGVMVVSALVLVNW 297
>gi|304398243|ref|ZP_07380117.1| protein of unknown function DUF6 transmembrane [Pantoea sp. aB]
gi|304354109|gb|EFM18482.1| protein of unknown function DUF6 transmembrane [Pantoea sp. aB]
Length = 299
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 93/294 (31%), Gaps = 13/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A I+W I + ++ + + +R L +L + ++
Sbjct: 3 FLYPLFAVIIWSINSIVSKLSASAIDPAAISFYRWLLALLVLTPFVL----PGVWRARVA 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA + + P+++V L V L+
Sbjct: 59 IKPHLWRLAMLGLLGMVLYQSLAYYAAHSVSALFMGIIGALIPLLTVLLSVVILRIAPTL 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ +++ + L+ + G+ L + +AY +
Sbjct: 119 GILLGSIISFIGLVWLVSEGNVMQLLNHGLGKGELLMLAASAAYALYGVLTRRWALPLPI 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ GF L L + ++ +G++R S
Sbjct: 179 WQSLYVQILFGVVLLLPGFLLAPEVALNLHNLPLVAFAGLFASIIAPFLWIHGVQRLGAS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
T I P+ + +V L + + + I G+ + +++ +
Sbjct: 239 TTSIFMNLIPVFTAMIAVIFLHEQLHSYHWIGGGLTLGGVILAQRLRTPLIRRK 292
>gi|256848520|ref|ZP_05553962.1| conserved hypothetical protein [Lactobacillus coleohominis
101-4-CHN]
gi|256714787|gb|EEU29766.1| conserved hypothetical protein [Lactobacillus coleohominis
101-4-CHN]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 96/289 (33%), Gaps = 12/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY----TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ TL A ++WGI+ L+ + Q++ L + R L + P + G
Sbjct: 2 KKERLWTLLAIVACMMWGISSLFATALFRLSPQINALWLSQIRQLTAGPILLIISGLVGG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ ++ + +L V + + A+ + + F+ P + +
Sbjct: 62 HPIKIFKENRHNIVTLICYGLFGMLPVQF-CYFMAVQEGNASIATVLQFIGPFFIIAYVA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIP 189
+F +R +QIIAAL+ + ++++ + +L +
Sbjct: 121 IFRHQRPLRIQIIAALIAFIGVVLLATNGHLTKLAITPIVLFWGLLSAIGVATNTLIPQN 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + I ++ + ++ + F + +
Sbjct: 181 LIKQGYSSLTITGWGIFVSGIALFCFHPAQPNLPHTHLVWWCVAGVVIIGTLIPFQLATN 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+K + + + P+ + SV + ++ + ++V A++
Sbjct: 241 SLKCISATNFSLTDAFEPITATIGSVVFFNLQMTSMDWLGSVLIVGAVL 289
>gi|256828266|ref|YP_003156994.1| hypothetical protein Dbac_0453 [Desulfomicrobium baculatum DSM
4028]
gi|256577442|gb|ACU88578.1| protein of unknown function DUF6 transmembrane [Desulfomicrobium
baculatum DSM 4028]
Length = 288
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/271 (7%), Positives = 64/271 (23%), Gaps = 1/271 (0%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G + + G ++++ + + + R+L + ++ ++L +
Sbjct: 5 GITLAILSALFMGTIGVFSR-ITGLPAETITFFRLLLGAGFLAIFLLATRQAVALRRWPT 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G L+ I V + + +
Sbjct: 64 WPVIINGALLAGFIIFYVQAMNLTSMANAIMLVYLAPVAASIFAHCFMGERLNFAGWILI 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ ++ + L +A + +
Sbjct: 124 GLAMLGFAAMMEFRLDFADGSNHAAGLGLAALAMLCYAGFILMNRRIRPHVPVMTRAFYQ 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+V F + + L + + R +T G + Y
Sbjct: 184 LLTGALVMLPFFLHSRPEITAVNGLWLLATGLIPGFLAITFAVVALSRLPAATFGTLAYF 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
PL ++ + + + ++ ++ +
Sbjct: 244 EPLAVVFFGWSLFGENLSVLQLAGCATIMAS 274
>gi|91978363|ref|YP_571022.1| hypothetical protein RPD_3900 [Rhodopseudomonas palustris BisB5]
gi|91684819|gb|ABE41121.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisB5]
Length = 341
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 79/285 (27%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + V + + R W + + +
Sbjct: 57 YLLLSLTSLFWAGNIVLARAVAGHVPPVTLSCVR--WIGAMLLLLPFAWPHLRRDWRKLR 114
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L + A++ + L Q P+ + RL
Sbjct: 115 THWVLMIVLSATG--FAINNVLSYWGLQYTQALNALLLQSSGPLFVALWSLLLFGVRLTW 172
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
Q I L +L +L + L L+ A + Y PV
Sbjct: 173 TQAIGVALSLLGVLTIILRGDLLALAGIELNRGDLMVAAALCAFGIYSAMMPKRPVTHPL 232
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + F+ G + ++ + F+ G++
Sbjct: 233 SLIVVTTAGGALLLLPLAVWEFAAGIRPSADWVTAASLAYVVIFPSALAYLCFNRGVELI 292
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + PL V ++ +L + + + +V+ + +
Sbjct: 293 GPNRSAPFLHMMPLFGSVMAIVLLGEKPELFHLAGYAMVIAGVFI 337
Score = 39.5 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 10/131 (7%), Positives = 40/131 (30%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + A G + L + + + L +
Sbjct: 62 LTSLFWAGNIVLARAVAGHVPPVTLSCVRWIGAMLLLLPFAWPHLRRDWRKLRTHWVLMI 121
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + + +G++ + +++ + PL + + S+ + + + I +
Sbjct: 122 VLSATGFAINNVLSYWGLQYTQALNALLLQSSGPLFVALWSLLLFGVRLTWTQAIGVALS 181
Query: 294 VIAMVVYLLPT 304
++ ++ +L
Sbjct: 182 LLGVLTIILRG 192
>gi|67921754|ref|ZP_00515271.1| Protein of unknown function DUF6 [Crocosphaera watsonii WH 8501]
gi|67856346|gb|EAM51588.1| Protein of unknown function DUF6 [Crocosphaera watsonii WH 8501]
Length = 336
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 27/315 (8%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL----------PGVFFAI 71
M G ++ +++G+ T+ L ++ +I R SL +
Sbjct: 6 NKMPGRAYLLIGVMIFGVANSVTRKLTEIGAENLIDGRNPISLCNVLFVGNLCALIALIG 65
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
VY L + +L+ + A+ G F AL + P +
Sbjct: 66 VYSRQLNPTAFRHLSSKNWCYLLLVALLSGALAPGLFFSALEQTAVNNVILVSRIEPPLI 125
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMT--------------LHSGIPLLSLAIAVT 177
+ L +FL+ R+N + A++ + +++ G L
Sbjct: 126 LLLSVIFLQARVNSWVVSGAIVSAVGVVLTVVLQPPGSEMIQMSAFQLGRGELMATAGAV 185
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL---GNIPDTLFLI 234
+SA + + + + A + + + G F+ + +
Sbjct: 186 FSAIANIISQVSLKNVPLGLFNVVRTAFWTIIFFAIAWYLFGIEHFMDVSSPLLWKWMVF 245
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
++ + G+KR+ S V + P+ ++++ FIL + + I +++
Sbjct: 246 YGTVIVVIGQLSWFAGLKRSNASEVSLANSFNPIAGVLAAFFILGETPTAAQYIGGLVIL 305
Query: 295 IAMVVYLLPTVINSG 309
+++ + V +
Sbjct: 306 GGIILNQIGIVRENK 320
>gi|319794447|ref|YP_004156087.1| hypothetical protein Varpa_3795 [Variovorax paradoxus EPS]
gi|315596910|gb|ADU37976.1| protein of unknown function DUF6 transmembrane [Variovorax
paradoxus EPS]
Length = 297
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 95/296 (32%), Gaps = 6/296 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T+ G + A + + L ++V++ R L +LP V I + +
Sbjct: 6 TLRGIAAMLLACAFFACMDALLKSLAGHYPPVQVMALRGLTALPLVCLYIAWRREAGGVF 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + V + T+L + +Y L + F+ P++ V + L E
Sbjct: 66 NRRTRWRLHLLRTVLNMTMLVLF----VYGLKSLGLAEAYTLTFIAPLLMVLIAVPLLGE 121
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ IA L + ++I G L + A+A+ +A C+A +
Sbjct: 122 SVQPRHWIAIGLGFIGVVIALRPEQGAFLSAGAVAILVAAICYALSNVLGRLISRTEPSA 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ V G + T L G + + + + + +
Sbjct: 182 ALVFWATAGMAVGGGLLSAPQWVPIQAEHTWVLAGLAISGFLGQLAIAEAFRHGQAAAIA 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
EY+A ++ + D +++ + + + K + +
Sbjct: 242 PFEYSALAWGLLLDWLFWQATADVWTLGGGALIIASGLWLARSEAPKAAGKKRQAA 297
>gi|299770997|ref|YP_003733023.1| hypothetical protein AOLE_13815 [Acinetobacter sp. DR1]
gi|298701085|gb|ADI91650.1| hypothetical protein AOLE_13815 [Acinetobacter sp. DR1]
Length = 298
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F Q V V+ R L +
Sbjct: 16 KALLCLMTSALLFSIMGVCIRFASQTVDNATVVFFRNAVGLFIFIPMLF-------KQGL 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 69 DFIKTDKLWMHTWRSLVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + +L+ + + A + V + ++
Sbjct: 129 TKSMIFAAVIGLVGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + LI GLL + SY A +G M
Sbjct: 189 FYFCIFGSLISSIPMFWHWRIFTWHELSLLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 249 YIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILL 284
>gi|228938091|ref|ZP_04100711.1| Transporter, EamA [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970966|ref|ZP_04131603.1| Transporter, EamA [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977570|ref|ZP_04137962.1| Transporter, EamA [Bacillus thuringiensis Bt407]
gi|228782214|gb|EEM30400.1| Transporter, EamA [Bacillus thuringiensis Bt407]
gi|228788775|gb|EEM36717.1| Transporter, EamA [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821576|gb|EEM67581.1| Transporter, EamA [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 36.8 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|196039094|ref|ZP_03106401.1| transporter, EamA family [Bacillus cereus NVH0597-99]
gi|196030239|gb|EDX68839.1| transporter, EamA family [Bacillus cereus NVH0597-99]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 89/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNASFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|196248556|ref|ZP_03147257.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
gi|196212281|gb|EDY07039.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
G11MC16]
Length = 308
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 94/299 (31%), Gaps = 15/299 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T + Q + + L + R ++ +F I S L
Sbjct: 9 LSLLAVAFVWGATFVVVQNAISFLEPLSFNAIRFSFAGLFLFAWIAIVSRPL----LRQL 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +G + L + LL F ++ V+ + LK+
Sbjct: 65 SWRVIGAGAWMGLWLFGGYALQTVGLLYTTSSKAGFITGLSVVLVPLFSFLILKQNPTTN 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I A+L L +T + + + V + A FA I G + + + +
Sbjct: 125 AAIGAVLAAFGLYWLTGGAELSFNRGDVFVFFCAISFAMHIIVTGQYSSRYSTLLLTMVQ 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIP----------DTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ N+ I L + F I + K
Sbjct: 185 IFTVAILCFIFAFCLEEATNMWDTTVLRRPEVWGALTITSLLATTAAFLIQTGVQKYTTP 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ V ++ P+ +++ + + + ++ M++ LP+ + GK +K
Sbjct: 245 TRVALIFAMEPVFAALTAYLWAGERLSPSAWLGGIAILAGMILSELPSARSWGKRWREK 303
>gi|311279370|ref|YP_003941601.1| hypothetical protein Entcl_2063 [Enterobacter cloacae SCF1]
gi|308748565|gb|ADO48317.1| protein of unknown function DUF6 transmembrane [Enterobacter
cloacae SCF1]
Length = 298
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 88/274 (32%), Gaps = 3/274 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A ++ G + L + V EV+ R L +F I S L
Sbjct: 6 KGVWQMSLAMVISGSIGAFV-LLSGLPVTEVVFWRCLIGAIALFVFIRLSKQPFSPLTKA 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+G + L + + ++ + + + + + V L +
Sbjct: 65 TLALAILGGVALVVNWLLLFAAYERLSIGLSTVVYNTQPFMLVMMGMLLGERVSLVKWGW 124
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L ++I+LS + + H G L + +A+ A F T V +
Sbjct: 125 LLLAFGGVVILLSSELTSAHGGEWLTGIGLALG--AAFFYALTAIVTRKLKSIAPQHIAF 182
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
I L VV +P + L + ++ + I++ G + +
Sbjct: 183 IQVLTGVVMLLPLAHMPSLTNGLPWMILLTLGVVHTGIMYQLLYSAIQKLPTPITGSLSF 242
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
P++ IV + ++ + +++ A
Sbjct: 243 IYPVVAIVVDNMVFGHSLNITQLAGGALILFAAA 276
>gi|299136061|ref|ZP_07029245.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX8]
gi|298602185|gb|EFI58339.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX8]
Length = 336
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/320 (12%), Positives = 98/320 (30%), Gaps = 24/320 (7%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCA-YILWGITPLYTQF-LEQVSVLEVISH 58
M + S ++ N P + F Y WG T + Q+ +
Sbjct: 1 MTPSSQHSNQSNVPTRSNRKTPPPAFIIVAFACVYFFWGSTYTAIRIGAAQLPPFVLTGV 60
Query: 59 RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGF 118
R + + F L L+ L + + + +LA +YA
Sbjct: 61 RFCVAGAILL-----FCCRLRGLRILLPLRTLITLSMIGLLLLAAGNTSLVYAEKYIPSG 115
Query: 119 LTSFSYFVTPVISVFLGS-VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI--- 174
L S + TP+ + + E LN I LL L ++ + + + ++ +
Sbjct: 116 LASLIFAATPLFIALIEMALPHGEPLNLRGWIGILLGFLGMVTLLGPTLHEVFTVGLFTN 175
Query: 175 -------------AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
A++W+ + + + ++ ++ F
Sbjct: 176 TTRLIAILACLGGALSWAIGSLYSRHQRLNVNSFVSSAWQMIFAGFFNLLLATMFGQWPQ 235
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+ + + Y ++ ++ V Y P++ ++ + +L +
Sbjct: 236 AHWNVSTFGSLAWLITGGSLIGYSSYVYLLEHVPVAKVATYAYINPIVAVLLGLLLLHER 295
Query: 282 IDTVRTIVFGIVVIAMVVYL 301
+ + ++++A+ +
Sbjct: 296 MQAAEFVGMALIILAVALLT 315
>gi|260435840|ref|ZP_05789810.1| integral membrane protein, DUF6 [Synechococcus sp. WH 8109]
gi|260413714|gb|EEX07010.1| integral membrane protein, DUF6 [Synechococcus sp. WH 8109]
Length = 304
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 88/287 (30%), Gaps = 15/287 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ G+ + + + + + + + L + V E++ R L S+ +
Sbjct: 20 NRDSVRGSRALILSSLAFSLMTVCVKQLNSRLPVAEIVLCRALISIVLTAVGLRLAR--- 76
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ G+LV + ++ F A+ + + P + +
Sbjct: 77 -----VSPWGQRRGLLVARGVLGSLALLCFFEAIDQLPLASATVLQYTYPTFTAVAALLL 131
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGS 192
L E L A LL + + ++ + + + A A + V
Sbjct: 132 LGEPLRRRISAAVLLGWIGVTLVVQPQWLTGTAQPAQLIPALIGIGGALMTALAYVSVRR 191
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ + V + + +L+G G++ + G++
Sbjct: 192 LSQTEHSLVIIIYFPMISVPLTLPWVLQQGVWPQGIEWFWLLGVGVMTQLGQIWVTEGLR 251
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + Y + + I+ + +V+ A ++
Sbjct: 252 CLPAARATSINYVQVVFAAGWGWLWFAETINAWQVGGGMLVLAATLI 298
>gi|229590459|ref|YP_002872578.1| hypothetical protein PFLU2998 [Pseudomonas fluorescens SBW25]
gi|229362325|emb|CAY49227.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 119/294 (40%), Gaps = 7/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A L+ + +T L +S LE+ R+L ++P + ++ + L+
Sbjct: 10 KGVVLSVSASALFAVMYYFTSLLTPLSGLEIFGWRMLLTVPCMTVFMIVSGEWRRVWELV 69
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P+ + ++ S+ +L V F++A L + S YF+ P+ V G + E
Sbjct: 70 RMLAGKPRLIAGVLLSSALLGVQLWLFMWAPLNGRSLDVSVGYFLLPLTMVLTGRLVWGE 129
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+L++LQ +A L +L G +L + + + Y RK + G +++M
Sbjct: 130 QLSYLQRVAVFFAGLGVLNELYQAGGFSWATLVVIIGYPLYFIVRKYLKTDHLGGLWLDM 189
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A ++V + GL+++ + + S G
Sbjct: 190 ALMLPVAWWFVQSGEQGFAVMDAHP--KLYALIPMLGLISASALVSYIIASRLLAFSLFG 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P+L ++ IL + I + + + +A++V + + + +
Sbjct: 248 LLSYVEPVL-LLGVALILGEGIKGGEWLTYIPIWLAVMVLVFEGFKHLVRQRRA 300
>gi|229101214|ref|ZP_04231978.1| Transporter, EamA [Bacillus cereus Rock3-28]
gi|228682182|gb|EEL36295.1| Transporter, EamA [Bacillus cereus Rock3-28]
Length = 316
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 96/306 (31%), Gaps = 23/306 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIRPQEVGEQILFAGYRFFLSGVMLLLFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K ++ + + F + G + + + L
Sbjct: 74 MQFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +I+ + +++ ++ H GI L A +Y
Sbjct: 129 LYKDDALNMRKIMGVSIGFCGVILVNVPSDGSLSFHFGIGSSLLLGAAMMYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F N+ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSVGLLCIGALQVGAMPFTFNLYTILMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
Query: 309 GKNKTK 314
+ K +
Sbjct: 309 MEQKKQ 314
>gi|224367404|ref|YP_002601567.1| hypothetical protein HRM2_02810 [Desulfobacterium autotrophicum
HRM2]
gi|223690120|gb|ACN13403.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 304
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 88/297 (29%), Gaps = 18/297 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+M + + +LW + + + + VI+ R++ F F G
Sbjct: 7 RLMPHAALIVSSLLWASSFIALKLAFANYHPMVVIAGRMMVGSLCFIFIPQVFRGVK--- 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +++ +++ F AL+ + P++ F L E
Sbjct: 64 ---ILKQDIRPLVLMVLMEPCLYFIFEAKALVLTTASQAGMITALCPLMVSFGAFFVLGE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKTIPV 190
RL I ++ ++ ++ G LA+ ++
Sbjct: 121 RLTPKIITGMVVSVVGACWLSTGGQVSASSPNPALGNFFEFLAMVCGAGYGIMLKQLTNR 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + F + A F + + + ++ + +SYG
Sbjct: 181 GFNPFFLTALQAFAGSIFFVPALFFPATLLPTSFEPVSVFAVIYLGSVVTLGAYGCYSYG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ R P+ ++ + IL + ++ + + +V + + T
Sbjct: 241 VSRIPAGQATSYINLIPVFTLIMGMAILDETLNFQQFVACSLVFGGIFLSQHRTRKQ 297
>gi|254449534|ref|ZP_05062971.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198263940|gb|EDY88210.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 285
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/273 (9%), Positives = 82/273 (30%), Gaps = 7/273 (2%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
+T + V + R L + I + + + + +
Sbjct: 10 AVTAIVKHIGNDVPAAQSAFLRYFLGLVFLIPMI-------RPILAAHLTKRQLKLFIAR 62
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+ + + +A+ + +++PV ++ LKE L ++ A ++ ++
Sbjct: 63 GVVHTIAVILWFFAMARIPIADVTAMNYLSPVYVTLGAALVLKEALPPRRLAAVIIALVG 122
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
+++ + IA+ +A FA + G V+ + + +
Sbjct: 123 AIVILRPGFREIDHGHIAMLGTALMFAAGYLIAKQLSGEVSAAVVVGMLSSTVTIGLAPF 182
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ D +L + + A L+ + + + + +
Sbjct: 183 AWAVWVPVAWSDIGWLFLVACFATAGHYTMTLAFAAAPLTVTQPVTFLQLIWAVAMGALV 242
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+P+D I++ ++ + +
Sbjct: 243 FNEPVDGWVVFGGAIIMASISFITWREALAKRR 275
>gi|254392972|ref|ZP_05008137.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197706624|gb|EDY52436.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 326
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 80/290 (27%), Gaps = 14/290 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+A +LW + + E S + R+L + ++
Sbjct: 4 SADRARWTALAAAGVTVVLWASAFVSIRSAGESYSPGALALGRLLAGALALGCVLLIRRE 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
GL + V V+ + + + P++ LG+
Sbjct: 64 GLPPRAAWPG------IGVSGLLWFGVYMVVLNWGEQEVDAGTAAMIVNIGPLLIALLGA 117
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIP 189
L E L I ++ + + + L IA A +
Sbjct: 118 RLLGEALPPRLIAGMVVSFVGAVTVGLSMSGDGSASVLGVFLCLIAAVGYAGGAVAQKPA 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + A+ + + G E + + + ++Y
Sbjct: 178 LKHASALQVTAFGCLTGAVLCLPFTGQLVAEAGQAPLSATLNMVYLGVFPTALAYTTWAY 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ R +G Y P L+++ S +L + + + + + + V
Sbjct: 238 ALARTTAGRMGATTYAVPALVVLMSWAVLDEVPGPLTLLGGVLCLAGVAV 287
>gi|59714238|ref|YP_207013.1| drug/metabolite exporter family protein [Vibrio fischeri ES114]
gi|59482486|gb|AAW88125.1| transporter, drug/metabolite exporter family [Vibrio fischeri
ES114]
Length = 291
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/286 (9%), Positives = 76/286 (26%), Gaps = 1/286 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +F LWG + L+ + + +I RV ++ + + L + +
Sbjct: 4 ILSLFTLAALWGGSFLFVRIAANPLGPAVLIEVRVAFAALTLLVVSFFLKKSLRFMSNIK 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L + + T+ + +
Sbjct: 64 HFLILGLFNSALPFLLFAYSAQVLNVSTLAVLNSTAPIWGAVIGAIWTRTRLSKDVIFGL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + + +++ + + + + + +Y A S F
Sbjct: 124 ILGMIGVSVLVGWEAINIGDEAIIPIITALIGAFSYGVATNYAKNAPSVEPFNNAHGSMW 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
++ V+ + + + + ++ IK S+ + +
Sbjct: 184 ASVLLVLPLVPFMPVREEVTSDIIAAVFALGAVCTGLAYLLYFRLIKELGASSALTVTFI 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ I+ L + + I +VVI + K
Sbjct: 244 IPVFGILWGYLFLGETVGVNAIIGTILVVIGTMFVTGFASKFMSKK 289
>gi|302540650|ref|ZP_07292992.1| integral membrane protein [Streptomyces hygroscopicus ATCC 53653]
gi|302458268|gb|EFL21361.1| integral membrane protein [Streptomyces himastatinicus ATCC 53653]
Length = 315
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/272 (11%), Positives = 76/272 (27%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L+ + E + L V R+++ + +V L +
Sbjct: 40 ALVWGFSFLFIKVGTEAFAPLYVTLGRMVFGTAVLLTVLVAKRERLPRGARVWGHLAVAA 99
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + + + + V + + +
Sbjct: 100 FFLNALPFSLFAYAETTIPSTLAGICNAASPLWGMVVAVAVVSDDRPTRQRVAGLGLGFA 159
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L SG + A+A+ S + G + L +
Sbjct: 160 GVLTVLGAWQGFSGQDPVGTALALIASLSYAIGWAYVRHTLAGTGNSHLAMSSGQLLLGT 219
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ V + +P L L F I + +T ++ Y P
Sbjct: 220 VQLAVAAPLAAPAPGSFPLLPLLSVLALGALGTGVAFLIQYGLVAEVGPTTAMMVTYFVP 279
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + V IL + + + I+++ +
Sbjct: 280 VIATAAGVLILGEHLSWNTPVGALIILVGAAL 311
>gi|229016979|ref|ZP_04173899.1| Transporter, EamA [Bacillus cereus AH1273]
gi|229023160|ref|ZP_04179671.1| Transporter, EamA [Bacillus cereus AH1272]
gi|228738085|gb|EEL88570.1| Transporter, EamA [Bacillus cereus AH1272]
gi|228744250|gb|EEL94332.1| Transporter, EamA [Bacillus cereus AH1273]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|154493691|ref|ZP_02033011.1| hypothetical protein PARMER_03032 [Parabacteroides merdae ATCC
43184]
gi|154086901|gb|EDN85946.1| hypothetical protein PARMER_03032 [Parabacteroides merdae ATCC
43184]
Length = 305
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 97/298 (32%), Gaps = 17/298 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L+ A +G+ PL++ V + ++ +R + V + +
Sbjct: 2 KVKGFLYGLIASATFGLIPLFSIPALENGVGLDSLLFYRFSLASVLVAVLMWVKKIPFDI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G+ T+ A+ + A L + + +F+ PV+ + VF K
Sbjct: 62 ------QKSEFGIAFILGTLYAITALWLTEAYLYIPSGVATTIHFLYPVVVSLIMFVFYK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVG 191
++L ++A + + + +++ + G+ L+ + + ++
Sbjct: 116 DKLTMPILLAMAMAVSGVYMLSGGNTPGGSINIKGLMLVLATVIAYAAYIVGMNRSRIAR 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+L+ +F V L+ L I
Sbjct: 176 LDSLKATFYILLSGAIVFLVNLAIKGDFPDPMPNLATTIDVLMVAFLPTLVSDLTLILAI 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ +T I+ PL + V L + + ++ +V+ A+ + + + I
Sbjct: 236 RYIGSTTTAILGCMEPLTAVCMGVLFLGEHLQPMQIGGIVVVLSAVCIVISGSYIRKW 293
>gi|89901979|ref|YP_524450.1| hypothetical protein Rfer_3210 [Rhodoferax ferrireducens T118]
gi|89346716|gb|ABD70919.1| protein of unknown function DUF6, transmembrane [Rhodoferax
ferrireducens T118]
Length = 309
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 83/300 (27%), Gaps = 15/300 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A G I + + + V + +I +R+L++LP +
Sbjct: 10 QIAPKKIAFGLSLAVLGAIAFSGKAIIVKLAYRYGVDAVTLIMYRMLFALPIFALMAWWA 69
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
S G T + L L ++ P + + L
Sbjct: 70 SRGKPAPTRQDWRGILGL----GVTGYYLASFLDFAGLAYISASLERLILYLNPTLVLLL 125
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFAR 185
G + + + Q L+ +L++ H L A AV+++ Y
Sbjct: 126 GLLLYQRHIQRAQGWGMLISYCGVLLVFGHEIQFLGRDAALGALLVFLSAVSYALYMTFS 185
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + L + + L ++ L +
Sbjct: 186 GELVQRLGSLRLVGLATTVACLLCIGQFVLLRPWSAALVAPEVIWLSILNATLCTAAPVL 245
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ I+R S P+ I+ V IL +P +VV + V+
Sbjct: 246 MVMMAIERIGPSLAAQAGMVGPMSTILMGVVILGEPFTAWVAAGTVLVVAGIFVFSRSGR 305
>gi|260557435|ref|ZP_05829650.1| DUF6-containing protein [Acinetobacter baumannii ATCC 19606]
gi|260409061|gb|EEX02364.1| DUF6-containing protein [Acinetobacter baumannii ATCC 19606]
Length = 298
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F Q V V+ R L +
Sbjct: 16 KALLCLMTSALLFSIMGVCIRFASQTVDNATVVFFRNAVGLFIFIPMLF-------KQGL 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 69 DFIKTDKLWMHTWRSIVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + +L+ + + A + V + ++
Sbjct: 129 TKSMIFAAVIGLVGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + LI GLL + SY A +G M
Sbjct: 189 FYFCIFGSLISSIPMFWHWRIFTWHELSLLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 249 YIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILL 284
>gi|218710073|ref|YP_002417694.1| putative permease [Vibrio splendidus LGP32]
gi|218323092|emb|CAV19269.1| putative permease [Vibrio splendidus LGP32]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 109/296 (36%), Gaps = 12/296 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + M G L++ A +L GI + ++ + ++ I R + + ++
Sbjct: 12 PSKMMKAMRGELYLLFATLLAGIGWIASKLVVLEMPGPVFIGVRFFVASLILLPFCIHHI 71
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
LSL + + + + A + +T +F + +I+ F+
Sbjct: 72 RKLSL-------KQVLSLCGVGLLLSASLQVWVYAVSMTESLSEGAFIMSLAMIIAPFVS 124
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVG 191
+ + + N ++ + I+ +L++TL +G + + ++ F +
Sbjct: 125 WIIFRVKPNRAFWMSFPIAIIGMLLLTLTNGWHVEQSQLYFLLASMLLSVHFVMNKRVIT 184
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + L + + + + + F + F++ + S + + + G
Sbjct: 185 NIKPIASICVQLFVVGVSGLAFASMTTQPEFEITQTLIFWFIVSAVVATSIRYLLQTVGQ 244
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ P+ ++ SV +L + ++ + + +++ ++ Y+ +
Sbjct: 245 HSVNMEVAALIMILEPVWTLLLSVSVLGETVEMQKLLGGAVIIGSLFCYIKWSRRK 300
>gi|254487965|ref|ZP_05101170.1| Integral membrane protein DUF6 [Roseobacter sp. GAI101]
gi|214044834|gb|EEB85472.1| Integral membrane protein DUF6 [Roseobacter sp. GAI101]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 77/291 (26%), Gaps = 9/291 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L + A + I + + V VL + R + VF ++ +
Sbjct: 2 TQQSRAILLMLGAIFCFSIMDATVKAVAPSVGVLPALWARYAGQMLLVFILVLPRLKHVV 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +L+ + L + PV+ ++FL
Sbjct: 62 RTRYPGLQFLRSILLMSATAFF-------FTGLTLIPLTDAAALMSTNPVLITLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L ++ + ++ +I+ A+ +A C++ +
Sbjct: 115 GEALGVRRVTGIAVALVGAMIVIRPGSDVFSLSALLPLAAAACYSGYALLTRHVGADEDI 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L L V + + ++ +I L + + + + +
Sbjct: 175 WTSLFYTGLVGTVILSLAVPFRWQSPDMASVGLMIVIALAGTLGQLALIRAFSQGEAAIL 234
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y + + D +V+ +Y+ + +
Sbjct: 235 APYSYAGLAFAAFWGLVFFGETPDFWTVFG-SLVIAGAGLYVWHRETYAKR 284
>gi|126737306|ref|ZP_01753041.1| hypothetical protein RSK20926_12764 [Roseobacter sp. SK209-2-6]
gi|126721891|gb|EBA18594.1| hypothetical protein RSK20926_12764 [Roseobacter sp. SK209-2-6]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 92/286 (32%), Gaps = 6/286 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T L + LE ++ + + R+ ++ + + L +
Sbjct: 10 LMIATLGFVWGGTFLLIKLALEGMTPFWLAAGRIGFAALLLCLIWGWRGFKLFKEESDYP 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL-----KE 141
+ +G+ + + ++WG + + + V P+ +F+ +
Sbjct: 70 SLILIGIFSTALPFMLINWGQQHVSSGFTGLSMAAIPLMVLPLAHLFIPGERMVLRRAIG 129
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L +A L+ + + ++ C + T + ++ +
Sbjct: 130 FLIGFLGVALLIGGKAFESSSSELETLGRLACLSAAACYACSSILTRRLPPADPVGLAAV 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L I + + + G + L I + + + ++ A + + +
Sbjct: 190 FLVIGSFVILPAAWGTEGPPQMPDSQTLALVAILGLIPTAAANLLRVIVVREAGPTFMTL 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P+ +V L + + + G+++ + + +
Sbjct: 250 TNYQVPVWAVVLGAVFLGEELPASMLLAMGLILGGLCISQFGALTR 295
>gi|58338131|ref|YP_194716.1| permease [Lactobacillus acidophilus NCFM]
gi|227902689|ref|ZP_04020494.1| DMT superfamily drug/metabolite transporter [Lactobacillus
acidophilus ATCC 4796]
gi|58255448|gb|AAV43685.1| predicted permease [Lactobacillus acidophilus NCFM]
gi|227869595|gb|EEJ77016.1| DMT superfamily drug/metabolite transporter [Lactobacillus
acidophilus ATCC 4796]
Length = 309
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 92/295 (31%), Gaps = 12/295 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L ++ + + R++ S +
Sbjct: 3 TQKQRRLWAFLAALACVMWGISGLFAKSLFNISSDITPMWLSQIRMVTSGIILLIVAGIL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + FV P +
Sbjct: 63 KQ--KPIATMKNKHDAWVIIAYGIFGLLPVQLFYFIVVQQANASIATILQFVGPFFVMGY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ K+ + + +IAA+ + ++++ H L++ +V + A
Sbjct: 121 LAFTHKQVMRRIDVIAAIFAFIGVVLLATHGRFNHLAITPSVLFWGLLSAVGVATNTLIP 180
Query: 195 G------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + H L + F + +
Sbjct: 181 IGVLKRVSSLVVTGWGLLSAGICLMIVHPQMPHIPNTPHVWLDVLAVIVIGTLIPFQLMT 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ K ST +++ P + SV + + I +VV+A + +
Sbjct: 241 NSLRFIKASTASLLDAFEPFSATLGSVLCFGLVMTPMDWIGSILVVLAAMALNIS 295
>gi|75761975|ref|ZP_00741893.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74490531|gb|EAO53829.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 319
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/274 (11%), Positives = 90/274 (32%), Gaps = 14/274 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
++++ L LL + + + + + +
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMARCTLVFS 207
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + + T L + ++ G+++ +T GI P
Sbjct: 208 ALFYYYRYIVSFTVSNIDTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFNP 267
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + + L + + ++ + +VV ++
Sbjct: 268 IFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 301
Score = 37.2 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|30261692|ref|NP_844069.1| EamA family protein [Bacillus anthracis str. Ames]
gi|47777954|ref|YP_018256.2| eama family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49184521|ref|YP_027773.1| EamA family protein [Bacillus anthracis str. Sterne]
gi|52143766|ref|YP_083063.1| drug/metabolite exporter family protein [Bacillus cereus E33L]
gi|65318962|ref|ZP_00391921.1| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Bacillus anthracis str. A2012]
gi|165869338|ref|ZP_02213997.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167639204|ref|ZP_02397477.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|170706576|ref|ZP_02897036.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|177650366|ref|ZP_02933333.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190566308|ref|ZP_03019226.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|196033384|ref|ZP_03100796.1| transporter, EamA family [Bacillus cereus W]
gi|227815555|ref|YP_002815564.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|228914271|ref|ZP_04077886.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228926727|ref|ZP_04089795.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229121244|ref|ZP_04250475.1| Transporter, EamA [Bacillus cereus 95/8201]
gi|229602688|ref|YP_002866096.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|254755184|ref|ZP_05207218.1| transporter, EamA family protein [Bacillus anthracis str. Vollum]
gi|30255920|gb|AAP25555.1| transporter, EamA family [Bacillus anthracis str. Ames]
gi|47551659|gb|AAT30731.2| transporter, EamA family [Bacillus anthracis str. 'Ames Ancestor']
gi|49178448|gb|AAT53824.1| transporter, EamA family [Bacillus anthracis str. Sterne]
gi|51977235|gb|AAU18785.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus E33L]
gi|164714778|gb|EDR20296.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167512994|gb|EDR88367.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|170128674|gb|EDS97541.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|172083510|gb|EDT68570.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190562443|gb|EDV16410.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|195993818|gb|EDX57774.1| transporter, EamA family [Bacillus cereus W]
gi|227003108|gb|ACP12851.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|228662089|gb|EEL17698.1| Transporter, EamA [Bacillus cereus 95/8201]
gi|228832840|gb|EEM78409.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228845265|gb|EEM90301.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229267096|gb|ACQ48733.1| transporter, EamA family [Bacillus anthracis str. A0248]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|169633109|ref|YP_001706845.1| hypothetical protein ABSDF1403 [Acinetobacter baumannii SDF]
gi|169151901|emb|CAP00749.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii]
Length = 298
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 95/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F Q V V+ R L +
Sbjct: 16 KALLCLMTSALLFSIMGVCIRFASQTVDNATVVFFRNAVGLFIFIPMLF-------KQGL 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 69 DFIKTDKLWMHTWRSIVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + +L+ + + A + V + ++
Sbjct: 129 TKSMIFAAVIGLIGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + + LI GLL + SY A +G M
Sbjct: 189 FYFCVFGSLISSIPMFWHWRIFTWHELVLLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 249 YIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILL 284
>gi|83952260|ref|ZP_00960992.1| membrane protein, putative [Roseovarius nubinhibens ISM]
gi|83837266|gb|EAP76563.1| membrane protein, putative [Roseovarius nubinhibens ISM]
Length = 285
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/273 (12%), Positives = 88/273 (32%), Gaps = 7/273 (2%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
G+T L ++ E R + L + I L+ VG+
Sbjct: 10 GVTALVKLLGTRIPAPEAAFLRYVLGLVFLIPMI-------GTLRRMSWTKPVVGLFAAR 62
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+ V + + + + +++P+ ++FL E+L +++A + ++
Sbjct: 63 GAVHTVGVCLWFFGMARIPLAEVTAINYLSPIYVTIGAAIFLGEKLALRRVLAVVAALIG 122
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
LI+ L +A+ +A+ F + V+A+ ++ +
Sbjct: 123 ALIILRPGFRELGPGHLAMLGTAFFFGGSYLLAKKISAAHSAGVVVAMLSITVTIGLAPI 182
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+ + L G L + + + A L+ + + + ++
Sbjct: 183 ALMQWVTPTPMEVLISFGVACLATAGHFTMTLAFRAAPLAVTQPVTFLQLVWAVLMGAVF 242
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+P D + ++V A+ + +
Sbjct: 243 FGEPADGFVILGGVVIVAAISFISWREAVLKRQ 275
>gi|294632794|ref|ZP_06711353.1| integral membrane protein [Streptomyces sp. e14]
gi|292830575|gb|EFF88925.1| integral membrane protein [Streptomyces sp. e14]
Length = 319
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 83/295 (28%), Gaps = 22/295 (7%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+WG+ L+ L + R L + F +
Sbjct: 6 LFLAVLVAAVWGVNFTVIDIGLDHFPPLLFSALRFLVAALPAVFFV-----------GRP 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + V A +A FI L+S + V + +V L ER
Sbjct: 55 KVAWKWIVAVGLALGVAKFGLLFIGMDAGMPAGLSSLVLQIQAVFTALFAAVALGERPTR 114
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++++ L+ + + + G A + +A + + + +
Sbjct: 115 VRLLGMLIALSGIGAAAVDEGASGPMGAFLIVIAAAACWGLSNVLTRKAAPPDALNWMVW 174
Query: 206 PALFYVVWNGFSGGEHFFLG----------NIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ VV L F F + + ++R
Sbjct: 175 VSTVPVVPLLLLSLLTEGPSADLAALRGFDWAGAGTLLYVAWGATVFGFGAWGWLLRRHP 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
STV P+ + S+ L + + +R ++V + + L +G+
Sbjct: 235 ASTVAPFSLLVPVFGMSSAALFLGESVSPLRWCAAVLLVGGVALTTLTPGRRTGR 289
>gi|229149165|ref|ZP_04277406.1| Transporter, EamA [Bacillus cereus m1550]
gi|228634364|gb|EEK90952.1| Transporter, EamA [Bacillus cereus m1550]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 94/275 (34%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPHTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 37.2 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 39/101 (38%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPHTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|163734431|ref|ZP_02141871.1| hypothetical protein RLO149_09304 [Roseobacter litoralis Och 149]
gi|161392439|gb|EDQ16768.1| hypothetical protein RLO149_09304 [Roseobacter litoralis Och 149]
Length = 324
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/315 (9%), Positives = 80/315 (25%), Gaps = 13/315 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV 72
++ + CA L+ + + + V + + R ++LP + +
Sbjct: 1 MATDLTQNKPGRAIALKLCAVFLFMVMAALIKSVSPHVPPGQAVFFRSFFALPVLVLWLW 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L + + ++ + G + L + F ++
Sbjct: 61 QRGQLRQGLVPSNLMGHVWRGIFGTSAMGLTFAGLGLLPLPEVTAIGYATPLFAVLFAAI 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
FLG RL+ + + ++I+ +++ + + + + +
Sbjct: 121 FLGERVRIVRLSAVALGLIGVMIVIAPRLSVGADALTSAATVGAVLVLIASILRAMVQIH 180
Query: 193 SEGF------------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
F + W + LI GL+
Sbjct: 181 VRRLVQTDTTASIVFYFSITASTLGLLTLPLGWATGLDVLTWTAPPAWVIWMLILSGLIG 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + S + +Y + + + I +V+ V+
Sbjct: 241 GIAQIMVTASYRFGSASMLAPFDYASMIFASFIGYIAFGELPTGPILIGASLVIAGGVLI 300
Query: 301 LLPTVINSGKNKTKK 315
+ K
Sbjct: 301 IWRERQLGLDRSKSK 315
>gi|52141010|ref|YP_085819.1| drug/metabolite exporter family protein [Bacillus cereus E33L]
gi|51974479|gb|AAU16029.1| transporter, drug/metabolite exporter, EamA family [Bacillus cereus
E33L]
Length = 299
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 94/293 (32%), Gaps = 12/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + L + K +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVFLTTLRLLFINLFFLAYAIMCKKDLYIEKSEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KSVLLI-----GIIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G F
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFFITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ +++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLVWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQK 292
>gi|46199203|ref|YP_004870.1| hypothetical protein TTC0899 [Thermus thermophilus HB27]
gi|46196828|gb|AAS81243.1| hypothetical membrane spanning protein [Thermus thermophilus HB27]
Length = 284
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 74/263 (28%), Gaps = 13/263 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F + W + LE + ++ R + + L +
Sbjct: 8 AAFLTILFWASAFAAIRAGLEGLEPGHLVLLR------FLVAGALLLLYALLRGLPPPRR 61
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + + V+ +Y LT S + PV + L FL ERL
Sbjct: 62 EDLPRLFLLGFLGITVYHTALVYGELTVSAGAASLLIAMGPVFTALLSHFFLGERLGRRG 121
Query: 148 IIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L L ++ G + +A +++ F + G + +
Sbjct: 122 VFGFGLAFLGSALIAFGEGGGVGLSPGAFLVLLAALSTSFYFVLQKPLFGRYGSEEMTVY 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + L V+ + + ++Y + R S +
Sbjct: 182 TLLLGTLPLFVFLPGLPEAIRTAPRPALLSAFYLGVFPGALAYLTWTYALSRTPASRLSS 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDT 284
Y +P L ++ + L +
Sbjct: 242 FLYLSPPLAVLIAYLWLGEVPSP 264
>gi|15614304|ref|NP_242607.1| hypothetical protein BH1741 [Bacillus halodurans C-125]
gi|10174359|dbj|BAB05460.1| BH1741 [Bacillus halodurans C-125]
Length = 306
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/301 (11%), Positives = 86/301 (28%), Gaps = 7/301 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + VF +LWG+ + + L + + + R+ + V ++
Sbjct: 1 MNRWLTYFLVFFVMVLWGLNVVMLKLLVTSFPPVTMTALRIFVAGFVVLLVLLLLKTFRQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L K + + G + + L + + + LG +
Sbjct: 61 LTATEWKYVILAAIFGVLGHHFFLSIGLTMTSASNAVLILALLPLTTSLLAILLLGDMLT 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ R + + + + L +GI I + + I + +
Sbjct: 121 RWRGFGIFLGLIGVCTIVLFGEGGLAGIRTGDGVIFLAMMIQALSFVYIKKATDTLDAKQ 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGN------IPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + +++ E L + +F+I I++ I +
Sbjct: 181 VTGMMLLIGSLLLFVTSFIIEPNGLASMGDKALWIWWVFVISAVFATGLGHIIYNQAIHQ 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I P ++ S L + I + +V +++ K K
Sbjct: 241 LGTGETAIFNNLVPFFGLLFSALFLGEAIALAQIAGLLFIVAGVILGTGHVDAWMQKRKR 300
Query: 314 K 314
+
Sbjct: 301 R 301
>gi|218768562|ref|YP_002343074.1| hypothetical protein NMA1785 [Neisseria meningitidis Z2491]
gi|121052570|emb|CAM08910.1| conserved hypothetical integral membrane protein [Neisseria
meningitidis Z2491]
gi|319410808|emb|CBY91196.1| conserved hypothetical integral membrane protein [Neisseria
meningitidis WUE 2594]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 88/298 (29%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ ++G+ ++ A + I + + + E++ R+L+S + A V
Sbjct: 3 TAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRR 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + YA+ + + +
Sbjct: 63 DTFR--------TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFS 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKER++ LL ++++ S A + +
Sbjct: 115 FLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELS 174
Query: 196 FFIEMCV---LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
E + + + ++ + + P ++L G+ + K
Sbjct: 175 LAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + Y + +S+ F L + + + I++++ ++ + +
Sbjct: 235 VGDKFTVASLSYMTVVFSALSAAFFLAEELFWQEILGMCIIILSGILSSIRPTAFKQR 292
>gi|119774236|ref|YP_926976.1| hypothetical protein Sama_1099 [Shewanella amazonensis SB2B]
gi|119766736|gb|ABL99306.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 296
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/278 (8%), Positives = 76/278 (27%), Gaps = 2/278 (0%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + + ++ ++ RV ++ + +Y L G
Sbjct: 13 SAIWGASFLFIRIGVTELGPAWLMFLRVTFAALFLLGGAIYLKKALIGSAPLKHFIILGG 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + A L T+ + + + +
Sbjct: 73 INTALPFLLYGFAATELAASLMSVLNATAPLWSTLLLAIWQRSMPRGAALGGLITGFCGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG-SSEGFFIEMCVLAIPALFYV 211
+++ + ++L A Y FA + + + + +
Sbjct: 133 VLLAGVESLSLSEEGLWALAAGLGAAICYAFASIYTKASNHGNAYSNAHGCMWAASAWLL 192
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
F+ + + L + + ++ I ++ + + P+ I
Sbjct: 193 PTLLFAAPPEAMPSSGTLAAVVTLGVLCSGVAYLLYFRLIDEVGATSALTVTFLIPVFGI 252
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ L + I + I+++ +
Sbjct: 253 LWGALFLGEHIGWHTLVGTAIILLGTAISTGSIPRLRR 290
>gi|325860015|ref|ZP_08173142.1| putative membrane protein [Prevotella denticola CRIS 18C-A]
gi|325482541|gb|EGC85547.1| putative membrane protein [Prevotella denticola CRIS 18C-A]
Length = 307
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 102/287 (35%), Gaps = 5/287 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T+ G + + I +G PL++ + +S+ V+ +R + + +++
Sbjct: 3 HSSTIKGYGYASLSAITFGTIPLFSIPVMEAGMSLPSVLIYRFAFGCLSMMAVLLWRRQT 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + +L + + ++ + + + +I F +
Sbjct: 63 LHIRWGDGLRIMFLSLLYAVSAVCLFSSYEYMPGGVATTLLFSYPVWTEILLILFFHEKI 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS--LAIAVTWSAYCFARKTIPVGSSEG 195
L+ L IA + + + M + + ++ + ++ Y + +
Sbjct: 123 TLRITLAVFLAIAGVFFLGGIGQMDGIKSVWGIVLAMSSGLLYAIYMVIFPHMRIRRLPA 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI-PDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + L V++ F+ G + + ++ + + +
Sbjct: 183 LKLNFYIFFMAMLLLVLYASFTAGGVQRIPDGASFFSLILLGLVPTTVSNVTLVRSLTLI 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++V I+ PL + + ++ +P+ T I F +++ ++++ +
Sbjct: 243 DSASVAILGAFEPLTAMAIGITLMGEPLTTAVVIGFVLIIASVLILI 289
>gi|253681819|ref|ZP_04862616.1| integral membrane protein DUF6 domain protein [Clostridium
botulinum D str. 1873]
gi|253561531|gb|EES90983.1| integral membrane protein DUF6 domain protein [Clostridium
botulinum D str. 1873]
Length = 281
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 88/288 (30%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G +F+ A + + L+ + + + + + + I Y +
Sbjct: 1 MNKSKGIIFMILASLSFATMNLFGKLAFTATPYQKTFISNVVASIIICCIIFYKKDSIIG 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K + + Y+L + ++P ++ + LK
Sbjct: 61 KLENRKYLFLR------GIMGTISIFTLYYSLDYLFLADATILTKLSPFFTIIFSFIILK 114
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E Q+ ++ L L + + ++ SA + G
Sbjct: 115 ENFTKSQLYFLIMAFLGSLFVIKPEFNSSIIPSLMGILSACTAGIAYTMIRIL-GNKESF 173
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + F +I TLFLI G + + K A S +
Sbjct: 174 YTIILSFTGIATLTMFPSIFINNNISIQHTLFLILGGFCFTLGQVFLTIAYKSAPASEIS 233
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ +Y L + + K+ D + I + I+V ++ +L IN
Sbjct: 234 MFDYLGLLFAGIYGFILFKEVPDMLSIIGYFIIVAISILNILFNKINK 281
>gi|229195165|ref|ZP_04321940.1| Transporter, EamA [Bacillus cereus m1293]
gi|228588394|gb|EEK46437.1| Transporter, EamA [Bacillus cereus m1293]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGMYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNVGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQILGTMIVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|196034611|ref|ZP_03102019.1| transporter, EamA family [Bacillus cereus W]
gi|195992654|gb|EDX56614.1| transporter, EamA family [Bacillus cereus W]
Length = 316
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 99/299 (33%), Gaps = 21/299 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K +G+ + + G + + + S+F + +
Sbjct: 74 MNFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----IILAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|220929134|ref|YP_002506043.1| hypothetical protein Ccel_1712 [Clostridium cellulolyticum H10]
gi|219999462|gb|ACL76063.1| protein of unknown function DUF6 transmembrane [Clostridium
cellulolyticum H10]
Length = 290
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/277 (10%), Positives = 80/277 (28%), Gaps = 13/277 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ +F A +WG + + ++ ++ R + + +
Sbjct: 4 MALFFAAFIWGSSFFIMKDTVDVFPPHILLGFRFTIACILLSVVFYRRLKNI-------- 55
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + L + + + +F + VI FL + K + +
Sbjct: 56 NFEYLWKGGVIGLFLFLGYSTQTIGITNTTPGKNAFLTAIYCVIVPFLFWIVDKSKPDIY 115
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
AA++ + + +++L GI + A + + +
Sbjct: 116 NYSAAVICLTGIGLVSLTGSFTIGIGDAFTLLGGFIYATHLVAVAKLGRGKDPIILTIIQ 175
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+F + + + T L + + G K S I+
Sbjct: 176 FGYAGVFSWIIGLTTEYFPTEVSIKNVTGLLYLAIFATAVALLFQNIGQKYTHPSAAAII 235
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ S+ + + F + IA+++
Sbjct: 236 LSLESVFGVMFSIIFYGEQLTLRLAWGFLFIFIAVII 272
>gi|332139958|ref|YP_004425696.1| membrane protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327549980|gb|AEA96698.1| membrane protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 291
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 102/283 (36%), Gaps = 9/283 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +L G T L+++ + +S ++ R +++ +F + + L
Sbjct: 8 LISLHLTVVLLGGTALFSRLV-PLSASDITLVRSVFACIALFAFLKLAKNKIKL-----N 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K G+ + ++A+HW + A+ + + F PVI+V + F + RL
Sbjct: 62 SRKDYGVALGLGLLMALHWVTYFAAMQYAGVSVGMIALFTFPVITVLIEPFFERVRLVWQ 121
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I++ L +I+ + ++ + + I + + R I + + +
Sbjct: 122 DILSTLTVIIGVYLIVPETSLENDITLGVLIGIASAILYSFRNLIHRKHFKHYTGAQAMA 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ V+ + L+ + + + + ++ + T ++
Sbjct: 182 WQTLVISVLMLPVGSEAIASASTNSWLMLLLLGTVFTALPHALIAASLRHLRAKTFSLIA 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
PL + ++ +L + + ++ A V L T
Sbjct: 242 CMQPLYGVFLAIILLNETPGWSALVGGILITSASVYETLNTHK 284
>gi|296328354|ref|ZP_06870881.1| DMT family permease [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296154533|gb|EFG95323.1| DMT family permease [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 301
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 92/302 (30%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L F LWGI + FL + ++ +I +R++ + +Y+
Sbjct: 1 MKKDANFGMLSTFIGGTLWGINGVMGSFLFLYKNITTNWLIPYRLVL-AGLLLLGYLYYK 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + + +L+F + + A+ + + + P + +
Sbjct: 60 TGSKIFDILKNPKDLLQILLFGFIGMLGTQYTYFSAIQYSNAAIATVLTYFGPTLVLIFM 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ + + +IIA LL + ++ H L + S + +
Sbjct: 120 CLKERRKPLKYEIIAILLSSFGVFLLATHGDVTSLQISFKALVWGMLSALSVVFYTVQPE 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G I + I ++ + +FL+ F ++
Sbjct: 180 KLLKKYGPPIVVAWGMIIGGIFITFVTKPWNIDVIFDFTAFFVFLLIVFFGTIVAFILYL 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + I+ P+ + ++ L + I F ++ + +
Sbjct: 240 TGVNIIGPTKASIIACIEPVAATICAILFLGISFGFLDFIGFICIISTIFIVAYFDKKVK 299
Query: 309 GK 310
K
Sbjct: 300 KK 301
>gi|149377137|ref|ZP_01894886.1| hypothetical protein MDG893_02040 [Marinobacter algicola DG893]
gi|149358555|gb|EDM47028.1| hypothetical protein MDG893_02040 [Marinobacter algicola DG893]
Length = 301
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 97/302 (32%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L+ +LW + L +++ ++++ S+ + +V
Sbjct: 2 TNQKQAMLYGLGTVLLWSTVATAFKLSLRELTPVQMLVVACSASVIVMALILVAQRRW-- 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L L + + +++ A + ++ +L FL
Sbjct: 60 YLVFELSRRQYLQSFGMGLINPCLYYFLLFGAFDRLPAQEAQPLNYTWALVLAYLSVPFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
+RL I+A L+ ++++ + L+ + +A+ + + I +
Sbjct: 120 GQRLRRADILAGLICYSGVVVIATRGDVLSLTFSDPLGVGLAIGSTLVWASYWIIATRDT 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L +V F F ++SY +K+
Sbjct: 180 RDPVVGLFLNFLCGLPVIVVICGMTDGFDFSPTTGLFAATYVGVFEMGIAFVLWSYAMKK 239
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A + V + + +P L +V FIL + I + ++V + + T +
Sbjct: 240 AENTARVSNLIFISPFLSLVFIYFILGEIILPSTYVGLVLIVAGLWIQQRKTRETMARAS 299
Query: 313 TK 314
+
Sbjct: 300 SA 301
>gi|126461115|ref|YP_001042229.1| hypothetical protein Rsph17029_0341 [Rhodobacter sphaeroides ATCC
17029]
gi|126461129|ref|YP_001042243.1| hypothetical protein Rsph17029_0355 [Rhodobacter sphaeroides ATCC
17029]
gi|126102779|gb|ABN75457.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17029]
gi|126102793|gb|ABN75471.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17029]
Length = 308
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 89/296 (30%), Gaps = 7/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + A + + + + Q + + + I+ R L SLP +F G
Sbjct: 4 SDNLRGALAMTVAMAAFTVNDALMKAVTQTMPLFQAIALRGLVSLPLLFLYGWAVGGLRF 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + G+L A + ++ AL+ P+ ++ L
Sbjct: 64 RIP-----RRDGGLLALRAGADVLSTVAYLSALMVLPLANLVAILQSVPLAVTLAAALVL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-FFI 198
KE L + A L+ +L++ ++ + C + +
Sbjct: 119 KEPLGWRRFSAILIGFCGVLLIVRPGAEGFSLWSLVGLAAVGCIVARDLATRRIGSDLPA 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L ++ S F + L+L G + + ++ ++
Sbjct: 179 ATIALWTSGAVTLLGLAGSLPSGFGPVTGGEALYLGGAAVALMAGYVSIVLAMRGGDIAA 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V YTA L I + D + + F ++ + + +
Sbjct: 239 VSPFRYTALLWAIALGWLLFGDLPDGLALLGFAVITATGLFTIWREARLRRLPREA 294
>gi|90412310|ref|ZP_01220315.1| hypothetical protein P3TCK_09758 [Photobacterium profundum 3TCK]
gi|90326801|gb|EAS43194.1| hypothetical protein P3TCK_09758 [Photobacterium profundum 3TCK]
Length = 285
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 86/282 (30%), Gaps = 16/282 (5%)
Query: 33 AYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ + + + + + V E+++ R + SL + I K
Sbjct: 2 SAFAFALMSSCVKLVSTYGIPVFEIVAARAVVSLIISYADI--------KRKRISVWGNN 53
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+L+ ++ +A+ T + ++ PV + L VFL+ER+ II
Sbjct: 54 KKLLIARGVAGSLALICVYFAVATLPLAEATILQYLHPVFTALLALVFLRERIQLSTIIC 113
Query: 151 ALLIILSLLIMTLHSGIP------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ I+ LL+M A A A + V ++
Sbjct: 114 IVFCIVGLLVMVSPGLTFDSTAALPWLSVTAALLGALGSAIAYVIVKRLSSTEDSSVIIF 173
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L + + G F + + L L+ G+ + ++ S Y
Sbjct: 174 YFPLIALPLSVLFLGNDFVMPDTEALLLLLFVGISTQVGQIGLTKAMQTEVASKATAYSY 233
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ I+ + +++I + + ++
Sbjct: 234 VQVVFSIILGWLFFSELPSIWTWAGGTLIIIGAFINVFGSLK 275
>gi|329941495|ref|ZP_08290760.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329299212|gb|EGG43112.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 344
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 76/272 (27%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + +V R+L+ + A+ L T +
Sbjct: 66 SLIWGFSFLLIKVGTHAYAPFQVTFGRLLFGTAVLVAAMAVKRERLPRGARTWGHLAVAA 125
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L+ + + + + + V L R + L
Sbjct: 126 LLLNALPFSLFAYAELTVPSTLAGICNATSPLWGMALSLVALSEDRPTRRRFAGLGLGFL 185
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L G+ A+A+ S + G + L +
Sbjct: 186 GVLTVLGAWQGFHGLDATGTAMALLASLSYPVGWIYVRRTLAGTGASHLSLTGAQLLLAT 245
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ V +P L L + + +T ++ Y P
Sbjct: 246 VQLAVATPLFTELPHAFPVLPLLAVLALGALGTGLAVLLQYGLVAEVGPTTAQMVTYFIP 305
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + V IL +P+ + IVV +
Sbjct: 306 VIATAAGVAILHEPLAWSTPVGAVIVVAGAAL 337
>gi|225011119|ref|ZP_03701582.1| protein of unknown function DUF6 transmembrane [Flavobacteria
bacterium MS024-3C]
gi|225004753|gb|EEG42712.1| protein of unknown function DUF6 transmembrane [Flavobacteria
bacterium MS024-3C]
Length = 312
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/313 (12%), Positives = 104/313 (33%), Gaps = 19/313 (6%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+N+ P ++ L Y++WG T L + + ++ + + R + S +F +
Sbjct: 3 QNSKNPVLV-ILAFIAIYVIWGSTYLLNKIAVTELDPFMLAAIRFIVSGCLIFIIAIISG 61
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+++ K +AV + L+ G ++AL + P+I + L
Sbjct: 62 RSIAITK-----KQAVNTAIAGFLFLSFGNGVVVWALRYVDTSFAALEISSQPLIVLLLM 116
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+F ++++ + ++ L + + ++ I ++ + G
Sbjct: 117 RIFQGKKISPMSLLGVFLGFIGIYLLVSQKSILNQENSVLGMIMIFFCMVSWASASLFVG 176
Query: 196 -----------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+M + + G ++ + F
Sbjct: 177 KADLPKNFFVNTGYQMIFGGTILVLASIAIGEQWSNPINWSVKVQWSMVLLVIFGSIIAF 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY-LLP 303
F+Y +K V Y P++ ++ + L + I I +++ +
Sbjct: 237 TSFNYLLKVVSPEKVATNTYVNPIIALLMGWYFLNEQITQQSIIASAVLLTGVFFVNTKK 296
Query: 304 TVINSGKNKTKKS 316
++ + +TKK+
Sbjct: 297 QLVLFNRFRTKKN 309
>gi|222082569|ref|YP_002541934.1| hypothetical protein Arad_9256 [Agrobacterium radiobacter K84]
gi|221727248|gb|ACM30337.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 302
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 93/296 (31%), Gaps = 5/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S G + V A + W + +Y + L + I+ R L+ + + GG
Sbjct: 11 SSSEYEKGIVLVAVATLAWSCSGIYARLLTT-DIWTAIAWRSLFGGIFLLIPSFFLEGGF 69
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S + + + + FI AL + Y P I+ FL
Sbjct: 70 SRRQW---SSIFHPAGLAMIACQTISQACFIGALYMTTVANVTMIYATAPFIAAFLSWTM 126
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LKER+ +IA + ++ + ++ S I + + I V +
Sbjct: 127 LKERVAKRTLIAGGVCLVGVAVIV-ASSIGGGTGVGDLLALGMTVTFALIIVIPRIDRSV 185
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++ + F L L + F +F +G +R +
Sbjct: 186 PILPSSVVSGFLTFVLFLPFASTASLDAYNWLLLAAFGATNFALAFVLFLFGSRRMPAAD 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ +L + + I++ +V + + ++ + +
Sbjct: 246 AALVGSMEIVLTPFWVWLFFSERPPMATFMGGAIILATIVWHTAVDLRHARGVRAQ 301
>gi|205359541|ref|ZP_03224341.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205344308|gb|EDZ31072.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
Length = 332
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 103/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ + +S + R+L++ G+ F G
Sbjct: 35 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVTFSFMHGD 92
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L+FS F+ + + F++P I V ++
Sbjct: 93 KIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 152
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R L + A L ++ ++ H L IA ++A + +
Sbjct: 153 RRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLI 212
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + ++ G HF + F + S F ++ G
Sbjct: 213 AQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGA 272
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + S+ +L + +++ ++++ L + +
Sbjct: 273 QLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRAR 330
>gi|323700840|ref|ZP_08112752.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
ND132]
gi|323460772|gb|EGB16637.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans ND132]
Length = 298
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/272 (9%), Positives = 77/272 (28%), Gaps = 17/272 (6%)
Query: 39 ITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
+ + + Q + VI R+ + +L + +
Sbjct: 23 SSFIVLKIAFQRFDPMVVIFGRMFVASLCFLLVF------RNLRHIDYRPGDWKLLAFMG 76
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+++ F AL + P++ + + L E L L I+
Sbjct: 77 ICEPGLYFVFEALALTYTDASQAGMICALLPLMVALVARLTLDEPLTRRTATGFGLAIVG 136
Query: 158 LLIMTL----------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
++++ L + Y A K + F +
Sbjct: 137 AVVLSSVAEATDTASNPILGNFLEFLAMICACGYMIALKKLTPRYDPWFLTMVQAFTGSL 196
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
F+ + + L + + +++YG+ + + P
Sbjct: 197 FFFPLLFLPTTELPTAFDTTGVLSILYLGVFVTIGAYGMYNYGMSKIPAAQASAFINLIP 256
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ ++ + +L + ++ ++ +V+ + V
Sbjct: 257 VITLILGMVLLGERLNWMQYAASALVIAGVYV 288
Score = 39.5 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 30/104 (28%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + F H L F + + S
Sbjct: 38 MVVIFGRMFVASLCFLLVFRNLRHIDYRPGDWKLLAFMGICEPGLYFVFEALALTYTDAS 97
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G++ PL++ + + L +P+ FG+ ++ VV
Sbjct: 98 QAGMICALLPLMVALVARLTLDEPLTRRTATGFGLAIVGAVVLS 141
>gi|311694630|gb|ADP97503.1| membrane protein containing DUF6, transmembrane [marine bacterium
HP15]
Length = 292
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 73/296 (24%), Gaps = 6/296 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + L + + V + + R L F
Sbjct: 1 MQTTRIKGLTIAALGVLFIVPDALLVK-ITSVDPVVFLFWRGLLLAISFFVISWARYRSR 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + K +F A A+ F+ + PVI+ +
Sbjct: 60 LVPEI----RKCGRKGLFCAGAFAISTLGFVVGMKNTAAGNVLVILNTAPVIAAVIAWAV 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KE L + L+ + M + L + + A + V S+
Sbjct: 116 WKETLPLRTWVVILVCVTGATFMAVGEFGKGDPLGLLMAVVAATALASNLNVARSKPDSD 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+L AL G + + + G + +
Sbjct: 176 MSVMLMFGALVLAGVAALLSGAQM-PSARDFFFIALLCLVFLPTACILIQIGPRYIPAAE 234
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V +M + L + + + IV A+ V+ V K +
Sbjct: 235 VSLMLLLETVFGSFLVWLFLGEVPPKLSLVGGVIVFSALAVHGWTEVSRYRKARVA 290
>gi|284048681|ref|YP_003399020.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
gi|283952902|gb|ADB47705.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
Length = 293
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 11/290 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M G L + ++WG + ++ V + R L + + ++ F G
Sbjct: 1 MDQMKGNLLLLLTALIWGSAFVAQSVGMDYVGPFTFNAARNLLATGVLVPVVLAFGGVRQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV------F 133
P AV + + + + + Q + I + F
Sbjct: 61 GSLWQRLRPDAVTVKAGLCCGVIMGVASNLQQVGIAQTTAGKAGFITALYIILVPILGRF 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LG K L + + +L + S L AV ++ + + +
Sbjct: 121 LGRTVRKILLLCVPMALVGFYLLCVTGDFTISFGDFLVFLCAVFFALHILCVDHFLLKGA 180
Query: 194 EGFFIEMCVLAIPALF----YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G + A+ L +VW L GL + + +
Sbjct: 181 SGVRVAWIQFAMTFLVSLLGALVWETLPAAGLGPALWAARWPLLYTAGLSSGVAYTLQIV 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G K +T ++ + +++ L + + I G+V A+++
Sbjct: 241 GQKYTDPTTATLIMSLESVFAVLAGWLFLGEVMTLREIIGCGLVFAAVLL 290
>gi|258624326|ref|ZP_05719275.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258583477|gb|EEW08277.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 297
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/275 (10%), Positives = 78/275 (28%), Gaps = 1/275 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ + LS+ +
Sbjct: 13 AAIWGGSFLFMRIAAHSFGPAYLIEARVAFAAFSLLLVAQLLKKSLSIRQYWRHFLILGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + T+ + + K L + +
Sbjct: 73 INTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFFWHGTPLTRKALAGLLLGVTGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+I+ + + L + A+ +Y A F A +V
Sbjct: 133 AVIVGWDVAAIGPEASLPIICAALAAGSYGLATNYTKQAPQVSAFENAHGSMWAACIWVA 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
++ + + + + I+ +K ++ + + P+ I+
Sbjct: 193 PLMLFVPLRESPSSMEWSAVIALGVICTGLAYLIYFRLVKEIGAASTLSVTFLIPVFGIL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+IL + + I +V+ ++ ++
Sbjct: 253 WGYWILDESVGLNTLIGTVLVLAGTMLVTGFSLRR 287
>gi|229028625|ref|ZP_04184740.1| Transporter, EamA [Bacillus cereus AH1271]
gi|228732691|gb|EEL83558.1| Transporter, EamA [Bacillus cereus AH1271]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 92/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +L+
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLLL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL +A ++ + + + I
Sbjct: 148 FGVILVLLKGNFSLLFSLHFNSGDLWMLAAVCIWGMYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIFGTMIVVTGCYLFS 302
Score = 36.0 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + L+ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKIIPPRAAILPLLLMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|229160639|ref|ZP_04288633.1| Transporter, EamA [Bacillus cereus R309803]
gi|228622838|gb|EEK79670.1| Transporter, EamA [Bacillus cereus R309803]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KREWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKKSS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + + + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSVSAIVGCLCIFLGMIFVELPSKTKK 298
>gi|255078334|ref|XP_002502747.1| Drug/Metabolite transporter superfamily [Micromonas sp. RCC299]
gi|226518013|gb|ACO64005.1| Drug/Metabolite transporter superfamily [Micromonas sp. RCC299]
Length = 449
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/345 (9%), Positives = 86/345 (24%), Gaps = 53/345 (15%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY---------- 73
G + A + + + +E V ++V+ R S F
Sbjct: 98 KGEAVMLAATFTFAFQNVVAKTVEKGVPPMQVVFVRSCISGCVTAFTTWRRAAECNAIVR 157
Query: 74 --------------------FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALL 113
++ L + + + + ++ + +L
Sbjct: 158 EADAETTGGETRASASSGEDLRDSRFTIETLLGHRRFWRLCLLRGVAGSIAFSLAYVSLT 217
Query: 114 TRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH------SGI 167
+ +F+ P+ S + L E+ + +Q +A ++ L++ G
Sbjct: 218 YLTVGDSVAIFFLNPIFSSLMAIPALGEKPSAVQAVAIGGGLVGTLLIVKPPALFHALGA 277
Query: 168 PLLSLAIAV----------------TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
PL + A G + + A
Sbjct: 278 PLNDDDRRRDRPMDPVGVAVTLFSAFFCAVAMVSIRAVRGRVSALALAVWFHGCSAALGF 337
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
V + + LI L + +YG T + Y
Sbjct: 338 VSVTSAWPLPPVWPTAHEWGLLILISLTSFVGQLSLNYGYSHLPTLTASALYYLMVAWSA 397
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ ++ + +D + + + + + + K++
Sbjct: 398 LLGWAMMGERVDAYGALGAVAICVGGLAPGVHKARVERAARAKRA 442
>gi|91763011|ref|ZP_01264975.1| hypothetical protein PU1002_00095 [Candidatus Pelagibacter ubique
HTCC1002]
gi|91717424|gb|EAS84075.1| hypothetical protein PU1002_00095 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 315
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 93/290 (32%), Gaps = 11/290 (3%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-----VSVLEVISHRV 60
K ++ + + ++G L++ + + + + + + ++I R
Sbjct: 11 KKPIFTHKMFPKVKINNELLGILYMLLCQFSFATNDAFVKNIYEHFDEIFVLNQIIFIRG 70
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
++L + + K + L + ++ FF +
Sbjct: 71 TFTLLFIVLFLYIKKQ------LNFKLIFSSTELKIRGLLESLAALFFFIGIALLPFAKV 124
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA 180
+ P+I G++F+ E++ + A +L + ++++ + I +A
Sbjct: 125 YILLSMAPIILTAFGAIFMNEKVRWRRWSAVILGFIGVVVVVNPGKLEFGYYFIFPILAA 184
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + + + + + + + ++ G F+ + D L
Sbjct: 185 IMLSIRDMYTKNFKKDYHSLQTAFMTCFVVTIFFGILSIYKFYDFTLKDIFILFISAFFL 244
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + IK A +S Y+ L I+ F+ + T I
Sbjct: 245 AMGYIFSIATIKIALVSVTSTFRYSVILWGIIYGYFLFDEVPSTNSYIGA 294
>gi|89053064|ref|YP_508515.1| hypothetical protein Jann_0573 [Jannaschia sp. CCS1]
gi|88862613|gb|ABD53490.1| protein of unknown function DUF6 transmembrane [Jannaschia sp.
CCS1]
Length = 288
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 94/291 (32%), Gaps = 8/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G LF+ + + + + + L + + +++ R + + + + F
Sbjct: 2 TPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLSF 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + A ++ + AL+ Q + P+ ++
Sbjct: 62 RVPRGDRGKVVLRTIFEIAAMVTF-----LTALINMQIANATAILSALPLAVTLGAALLF 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-AVTWSAYCFARKTIPVGSSEGFFI 198
KE++ + A + +L++ ++ A+ R G S G
Sbjct: 117 KEQVGWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLVAGRDLATRGFSTGLPT 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ A V S + + +P L L + + ++ +++
Sbjct: 177 MTVAVITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAV 236
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
YT+ + +V + + +T+ +V+A V+ L
Sbjct: 237 TAPFRYTSLVFALVLGWLVFAELPNTLALCGAA-IVVATGVFTLIRERQVK 286
>gi|322387489|ref|ZP_08061099.1| DMT superfamily drug/metabolite transporter [Streptococcus infantis
ATCC 700779]
gi|321142018|gb|EFX37513.1| DMT superfamily drug/metabolite transporter [Streptococcus infantis
ATCC 700779]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/302 (15%), Positives = 103/302 (34%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ GTLF A I WG++ Q+L +S L + + R++ + + S
Sbjct: 2 TKTLKGTLFTVIAGIAWGLSGTSGQYLMVHGISALVLTNIRLIVAGLLLVLLSYIKSKEQ 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K +L+FS L ++ ++ A+ + +V PV + +
Sbjct: 62 FLAFLKDK-SSLFSLLLFSLFGLFLNQLAYLSAIQETNAGTATVLQYVCPVGILAYTCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K +I++ +L I ++ H + LS+ A + A I
Sbjct: 121 DKVAPTIAEILSMILAIGGTFLIATHGQMDQLSMTPAGLFWGLFSALTYALYIILPIKLI 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL-------FLIGYGLLNSFVFCIFSYGI 251
+ + + +GF + + F + F + F G
Sbjct: 181 QKWGSILVIGVGMTISGFVAVPFTGIIGASLLMSFDIFLAFAGIILIGTVFAYTAFLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+ V + ++++ + + L ++ K+
Sbjct: 241 SLVGPVKSSLLASIEPISAVFFAFIIMGDIFYPVDFLGMAMILLDVTIISLKDLMLEKKH 300
Query: 312 KT 313
K+
Sbjct: 301 KS 302
>gi|255527678|ref|ZP_05394536.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
gi|255508622|gb|EET85004.1| protein of unknown function DUF6 transmembrane [Clostridium
carboxidivorans P7]
Length = 295
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 88/286 (30%), Gaps = 13/286 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + IL+G ++ + + + +++ + + ++ +F
Sbjct: 10 KKGYGYSIISAILFGTAGIFVKLSLKIGLDSISLLTVQYIIAVFLMFTTAFITGKE---- 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + + + + F+ A + + F P++ + +F K+
Sbjct: 66 KLNITKIQLIRLSILGVVGNTFMTIFYYKAFEYLPVAMVTMLLFTYPIMVLIYSIIFHKQ 125
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSE 194
L+ +I+ + L L+ ++ + A+ + +
Sbjct: 126 NLDKRKILVIFMAFLGCLLTLNILVGNFKYSIKGVIFGLLSALFYAFMNLYTEKKLFELD 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I + +++ + + I + + IK
Sbjct: 186 SLSINAYSTLFSLISLLIYRWPTFLFKENIQINALIYVAILAIVCEVIPLTLLYGSIKYI 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
V I+ ++ S FILK+ + + I +V A+ +
Sbjct: 246 GALKVSIISNLEIPTAMIVSSFILKEQVTYTQVIGALFIVYAVYLI 291
>gi|228905293|ref|ZP_04069277.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis IBL 4222]
gi|228854346|gb|EEM99020.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis IBL 4222]
Length = 310
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 101/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWVLESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KKVPWQRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGTIGVLFITIPSKSADQEVSLIGDILILLSTFLFAFYTVLLKQPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALVEILYYGLPKIETWKTGLSVIYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ I +S+ +L + + + +V+I +
Sbjct: 244 RVSASVSGLYLNALPLISIATSIILLNESLTWRVIMGASLVLIGV 288
Score = 41.0 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWVLESIQPFTLLFIRLFFAGGICMLFSFKQLQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKKVPWQRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGTIGVLFITIPS 143
>gi|229030724|ref|ZP_04186752.1| Transporter, EamA [Bacillus cereus AH1271]
gi|228730572|gb|EEL81524.1| Transporter, EamA [Bacillus cereus AH1271]
Length = 309
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 91/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWKMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGMKK 300
>gi|297584287|ref|YP_003700067.1| hypothetical protein Bsel_1997 [Bacillus selenitireducens MLS10]
gi|297142744|gb|ADH99501.1| protein of unknown function DUF6 transmembrane [Bacillus
selenitireducens MLS10]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 96/301 (31%), Gaps = 18/301 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + I + L + + + + + R+L + V + + +
Sbjct: 2 LKAYILMIFVAIFYSGNILVGKAINDLPPVTIAFFRLLLAFVFVAPLAIRQAWHSRHVFL 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++K P + + + + F +L + V P ++V LG++ ++ERL
Sbjct: 62 SMKGPFLLM----TLSGVTFFNTFIYGSLQFTTATNVAVLETVIPALTVVLGALLIQERL 117
Query: 144 NHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I +L I S + + L + + + C++ +I V FF
Sbjct: 118 PKSAIAGTVLSIASAIYVVLGSQLFTMGSMQWNPGDFIMAGAIICWSVYSIMVKKYMAFF 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFL--------GNIPDTLFLIGYGLLNSFVFCIFSY 249
L + V+ + + G+ + + ++
Sbjct: 178 KPFAALVVMTGISVIVLFPVMLVEWAIIGVPSLSGGSEHWLGLVYLGLFPSLIALIFYNE 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ S +M P+ ++ + L + I T V+ + + IN
Sbjct: 238 AVGILGASRASVMLNLLPVFTMLGAFLWLGESITTHHIAGTAGVIFGVWLTTKKANINKI 297
Query: 310 K 310
+
Sbjct: 298 R 298
>gi|114048261|ref|YP_738811.1| hypothetical protein Shewmr7_2769 [Shewanella sp. MR-7]
gi|113889703|gb|ABI43754.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-7]
Length = 283
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/289 (15%), Positives = 107/289 (37%), Gaps = 10/289 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +L L + LE V +++ +R L++ V + G L L
Sbjct: 4 LLMILAAQLLIASGNLLVKLLETNAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP--- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A ++ + F+ A+L + + +P++ + + + FL ER+ +
Sbjct: 61 ----FYKVHLSRALLIGLGNAIFMLAVLHLPLATVTAVIYTSPLLLLLMSAFFLNERIGY 116
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +A ++ +L+++ + A A ++ + + L
Sbjct: 117 RRTVAGIIGFTGILLISQP--TEFNLYIGLAFFGAMTSATNSLILKAYSTHEHPFSTLFW 174
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
F +V+ + ++P + GL + + +RA S + +EYT
Sbjct: 175 SNAFAMVFLIPATWYEGADFSLPVAQVGLTLGLFYIGMTYFIIHAYRRADASQMAPVEYT 234
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + L + + V I G+V+ + ++ + K++
Sbjct: 235 GLIFAALFGWCFLDEHLSIVVCIGIGLVIFSSILPSYSELKAKWKSRRS 283
>gi|257458431|ref|ZP_05623571.1| integral membrane protein DUF6 [Treponema vincentii ATCC 35580]
gi|257444132|gb|EEV19235.1| integral membrane protein DUF6 [Treponema vincentii ATCC 35580]
Length = 314
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 79/283 (27%), Gaps = 18/283 (6%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A + WG T + ++ R + + + LS
Sbjct: 13 IALLVAAMFWGTTFVAISSTSDYFPPAFLVFTRCAIGVTVLMLVFIKRLKNLS------- 65
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + F VI+ F+ K + N
Sbjct: 66 RSYFTVCAFLGFLMTIGYLMQNLSIAAGCPPGRCGFLVATYCVITPFIAWFVWKRKPNIY 125
Query: 147 QIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++AA+L ++ + +++ + L+L +V ++AY
Sbjct: 126 HVVAAVLCLVGIGFISMPDLLKDSIVGLNLGDFLALIGSVVFAAYLVYLGRYVDTMDPIL 185
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + F L + S + + G +
Sbjct: 186 LTIGNLFFGAVYAGLYTYFFEDSAKIVWNGHSVFAALYLGVVCMSLTNILQAIGQREVVA 245
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
ST ++ + I+ +V + + I ++ IA+V+
Sbjct: 246 STAALIFSLESVFGIILAVLFWHEKVTVSLFIGCVLIFIAIVI 288
>gi|268317270|ref|YP_003290989.1| hypothetical protein Rmar_1716 [Rhodothermus marinus DSM 4252]
gi|262334804|gb|ACY48601.1| protein of unknown function DUF6 transmembrane [Rhodothermus
marinus DSM 4252]
Length = 307
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 91/294 (30%), Gaps = 17/294 (5%)
Query: 29 FVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + +P+ ++ E+ L + R L ++ + + L+ +
Sbjct: 13 MLALGLLSFSASPILVRWAGEEAPGLAIAFWRTLLAVVMLAPFAL------PQLRANRLS 66
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + + + L +H+ +I +L S ++PV LG +L ERL
Sbjct: 67 RREAALTLLAGIFLGLHFVVWILSLFYTSVASASVLVCLSPVFLAALGFWWLGERLALPV 126
Query: 148 IIAALLIILSLLIMTLHSGIPL----------LSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ A L ++ ++ L + +
Sbjct: 127 VAAIGLAVVGAALIGWGDHTGLETGPQPLLGNALALAGALLVSLYLLIGRVVRQRISWLA 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + AL V G + L + F+Y +K +
Sbjct: 187 YVFPLYLVAALTAFVPTLLLGVPLWGYSPRFYALCALMALGPQILGHGSFNYSVKYIPAA 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+G++ P+ + + + ++ + + +V+ A+ + + +
Sbjct: 247 WLGLLSLLEPVGASLLAYLLFEEVPPALSVVGMVLVLAAVAFAVQYEQWTARRR 300
>gi|241204983|ref|YP_002976079.1| hypothetical protein Rleg_2264 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858873|gb|ACS56540.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 302
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 90/286 (31%), Gaps = 9/286 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +++ A + + ++ + ++ E++ R L++ V+ +
Sbjct: 9 GAIYMSMAMAGFSASDALSKSVIAYMNAGEIMFLRGLFTSLLVYLIA------WKMGALR 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
M++F + +I AL S P++ F ++F E +
Sbjct: 63 SWRIMLQPMIIFRIICETLSAVTYITALGMMPIANASAILQSLPLVVTFGAALFFGEPVG 122
Query: 145 HLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ A L+ ++ ++I+ G +L S E + + V
Sbjct: 123 WRRWSAILVGLVGVMIIIRPGPEGFTAAALLCVAAVLTTAGRDLATRSISPEIPSLMITV 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + + + L+ +L + ++ ++S V
Sbjct: 183 ITAISASFFGALLIPVLGGWQPVSAAALGHLVLASVLVLVGYQSVILAMRTGEISFVAPF 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
YT+ + V F + D+ + IV+ + +
Sbjct: 243 RYTSLIFSSVLGFFFFAEVPDSWTLVGAAIVIASGLYTFYREAKRR 288
>gi|65320326|ref|ZP_00393285.1| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Bacillus anthracis str. A2012]
Length = 343
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/300 (10%), Positives = 91/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 40 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 99
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 100 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 154
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 155 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 214
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + + F ++
Sbjct: 215 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTLSWGSLAYSIIFATIFGLAMW 274
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 275 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 334
>gi|284050416|ref|ZP_06380626.1| hypothetical protein AplaP_02967 [Arthrospira platensis str.
Paraca]
gi|291570826|dbj|BAI93098.1| probable protein phosphatase [Arthrospira platensis NIES-39]
Length = 310
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/287 (9%), Positives = 83/287 (28%), Gaps = 11/287 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
VF + ++ + + L + +L S + A + + +
Sbjct: 13 IAIVFLGVVAISTGSIFVRLAIDAAGLRGVGFSLLISASRLSIAALLLTPTWGRVSWRTY 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P+A+ + + LA H+ +I +L ++ + + L ++L E+
Sbjct: 73 KPEAIFYAIAAGICLASHFAVWITSLSYTSIAASTTIVTTSSIWVAVLSWLWLHEKPGKA 132
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSL-----------AIAVTWSAYCFARKTIPVGSSEG 195
I+ + + +I+ L A+T + Y +
Sbjct: 133 TILGMTIALSGGMIIGLADAKLPTVASNPIAGNVLALMGAITAALYLMLGREAQQRGLSL 192
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ A+ + G + ++ + F++ + R
Sbjct: 193 SAYIAIAYTLGAMILLPLPLLWGVNYTGHSPTVYFYLILMGLVPQLIGHTSFNWAVNRTS 252
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ V + P+ + + + +++ + + +
Sbjct: 253 PTLVTLAILLEPVAASFLGYLLFAEVPSMRLILGAIVILTGVAIATI 299
>gi|228907331|ref|ZP_04071189.1| Transporter, EamA [Bacillus thuringiensis IBL 200]
gi|228852192|gb|EEM96988.1| Transporter, EamA [Bacillus thuringiensis IBL 200]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 89/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAISFVGPFTFNGIRFLFAGIILLFVQMIFSKNTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAIAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|209695120|ref|YP_002263049.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
gi|208009072|emb|CAQ79304.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
Length = 290
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 90/286 (31%), Gaps = 12/286 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +L G ++++ ++++ I R + + +
Sbjct: 11 LIITTLLAGAGWVFSKEAIQELPPFAFIGIRFVMASLCLLPFCFSALKK-------ALWQ 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + + + + ++ +F ++ + L R
Sbjct: 64 DCLRSMGVGVLLSSALFCWIHAISISDTLGEGAFIMSLSMLFVPLLAWPLFGSRPPRAFW 123
Query: 149 IAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + I L ++ + G + A A F + S + L
Sbjct: 124 FSLPIAISGLFLLAWNDGWNVSASQIWFICAAIGLATHFNFNSKYSASLPTILLTTLQLF 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
VV + S + I ++ L S + + + G K + I+
Sbjct: 184 TVGCLGVVLSLLSETWPQEVSVITWKWVVLSVLLATSLRYLLQTIGQKWVTPTNAAILML 243
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P+ ++ SV++ + + + + G++++++V Y V + +
Sbjct: 244 LEPIWTMLLSVWLYDESMPLNKLVGCGLLLLSLVFYRFSQVRHRLR 289
>gi|326801694|ref|YP_004319513.1| hypothetical protein Sph21_4321 [Sphingobacterium sp. 21]
gi|326552458|gb|ADZ80843.1| protein of unknown function DUF6 transmembrane [Sphingobacterium
sp. 21]
Length = 296
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 111/299 (37%), Gaps = 16/299 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A IL G T ++ + + ++ ++ +R+L++ +F + + G +
Sbjct: 5 YLLLHIAVILAGFTGIFGKLIT-LNEGLLVWYRMLFASLILFVILRFTRKGR------ML 57
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +L HW F ++ + Y +T + + K++
Sbjct: 58 HFREKIAIGKVGLLLMTHWVLFYASIKYANVSIGVVCYCLTSFFTAIFEPLINKKKFVPT 117
Query: 147 QIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+++ + L +L + ++ L I +S + A ++ + ++
Sbjct: 118 ELVLSALTLLGISLIFHFDTSYQLGILIGTISSSFAALYTIFNEQLVKNYDSKVINYYQM 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + AL ++ + ++ F G L ++ +F+ +K+ TV
Sbjct: 178 ISGTCVLALLMPLYLRYFPTDNLFPGLTDLLYLLFLALFCTVLLYMLFAESLKQISAFTV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQ--PIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ P+ I+ + ++ + ++ + V+ ++V+ L K KS
Sbjct: 238 NLSFNLEPIYAIILAFWLFNEGKEVNLSFYVGCTFVMTSVVLQSLIARRKRLKTARIKS 296
>gi|228937699|ref|ZP_04100335.1| Transporter, EamA [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970587|ref|ZP_04131237.1| Transporter, EamA [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977157|ref|ZP_04137558.1| Transporter, EamA [Bacillus thuringiensis Bt407]
gi|228782605|gb|EEM30782.1| Transporter, EamA [Bacillus thuringiensis Bt407]
gi|228789174|gb|EEM37103.1| Transporter, EamA [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821986|gb|EEM67978.1| Transporter, EamA [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326938194|gb|AEA14090.1| drug/metabolite exporter family [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 316
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 99/299 (33%), Gaps = 21/299 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGFMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN ++I + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKLIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
>gi|226941893|ref|YP_002796967.1| hypothetical protein LHK_02980 [Laribacter hongkongensis HLHK9]
gi|226716820|gb|ACO75958.1| DUF6 domain containing protein [Laribacter hongkongensis HLHK9]
Length = 296
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 92/299 (30%), Gaps = 17/299 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S P ++ L + + W + + + + + + R L + + +
Sbjct: 2 KSRPFIVACLLLTLTSLFWSGNFVLARAMHAALPPMALSFGRWLIAFVLLAPFAL----P 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ L + +L+ +A +A + P+++V G++
Sbjct: 58 RAWRDRRLLWEQRGRLLLLAALGVAGFNSLVYTGVQFTTATNAVLLNSFIPILTVAFGAL 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFAR 185
F ++ L+ Q+ +L +L++ G ++ +A+ +
Sbjct: 118 FFRQGLHGRQVAGLMLSFAGVLLIISRGEWARLAGLDLNRGDLIVFVAMVFWAVYTLAIK 177
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ G + L + + + +GG F L F L + +
Sbjct: 178 EVDSRIDRLGLLGVLVGLGVLIIAPLYAWEHAGGRTFELNAATLATFAYVGTLPSVAAYF 237
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
F+ G+ + + + P + SV L + + ++ + +
Sbjct: 238 FFNLGVGAIGPARAAMFIHLMPAFGALLSVAFLGEAFYLYHALGIAGILAGVGLSTRGR 296
>gi|225075966|ref|ZP_03719165.1| hypothetical protein NEIFLAOT_00991 [Neisseria flavescens
NRL30031/H210]
gi|224952681|gb|EEG33890.1| hypothetical protein NEIFLAOT_00991 [Neisseria flavescens
NRL30031/H210]
Length = 291
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/297 (10%), Positives = 92/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++WG + + ++ ++ ++ R+L + V + +
Sbjct: 1 MLYQILALLIWGSSFIAAKYSYEMLDPTLMVEARLLIAALMVLPSC-------RRHLGRI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L S V L + P++ VF+G F ++
Sbjct: 54 PRSEWKPLLWISFVNYVVVLMLQFIGLKYTSAASAVTMVGLEPLLVVFVGHFFFNDKAKL 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + + +M + ++ + ++ + +
Sbjct: 114 YHWICGAVAFAGVGMMVMGGAEEGGTIDWFGCLLILLAGLGFAGVIRPSRQMVARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + L + L + + +++ G+
Sbjct: 174 FTAASMAVAAVLCLPFSLVLADSYQINWSWGGTLSILYMGIGCSWLAYLLWNKGMNTVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ G++ P++ ++ +V IL + + + + +V+++ V + +++ K
Sbjct: 234 NVSGLLISLEPVIGVIMAVLILGEHLSAMSAMGITVVIVSTFVAGMLARVSNKHKKA 290
>gi|29348699|ref|NP_812202.1| hypothetical protein BT_3290 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29340604|gb|AAO78396.1| putative integral membrane protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 288
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 91/288 (31%), Gaps = 4/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV--LEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ PL+T Q + ++ +R L++ + ++
Sbjct: 1 MNKVNGFLYGLLSSASFGLIPLFTIPAMQAGMQFESILFYRFLFACMALGGILLINGQSF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + +L + + F+ + + ++ F
Sbjct: 61 RISRRDIPSLLLLAILYLMSAVFLFWGYKFMASGVATTIHFMYPVLTTLVMMLFFKEKKS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGF 196
+ + + T L + + A+ ++ Y + +G +G
Sbjct: 121 GWRIAAIASAVIGVYFLSGGNTETGSFSFFGLFIVLLSALGYALYLVTMSQLKIGRMKGL 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ V +F ++ ++ + +K
Sbjct: 181 LLTFYVFLFGGIFLLIGTSSISHLQPIREWHTAGNLILLALIPTVVSNLALVRAVKSIGS 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ P+ + +F+ + T + ++++A++V +L
Sbjct: 241 TLTSVLGAMEPVTAVCVGIFLFGEAFTTSIGVGIALIIVAVMVIILKR 288
>gi|323975122|gb|EGB70227.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli TW10509]
Length = 307
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAMSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|323488997|ref|ZP_08094234.1| hypothetical protein GPDM_06620 [Planococcus donghaensis MPA1U2]
gi|323397389|gb|EGA90198.1| hypothetical protein GPDM_06620 [Planococcus donghaensis MPA1U2]
Length = 293
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/280 (13%), Positives = 90/280 (32%), Gaps = 3/280 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L V L G + + + L +S L + R + + F ++ F T
Sbjct: 9 LLVVLTTGLMGSSFVVAKIGLIYISPLLLAGIRFTIAGSIMIFFVLLFKRKHPKNAATWG 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+G + + + A+ + + + + + +F + V+ L +
Sbjct: 69 KVILIGAVQTAGVMGAIFL--SLRTITSGESAILTFMNPLLVVLIGTLAMGMRYRIVQWF 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ + + L I L ++ + A + + + + +
Sbjct: 127 GVFVGFAGVFVTMGSHLDLQIGTLLGFLSAIFWAVGTLLIKKWGVAIDMWVLTAYQMLFG 186
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
L ++ + F + + ++ L + F I+ Y +++ V + A
Sbjct: 187 GLILLLGSAFLENAYIVINTTSVSILLWLSIPASIIQFTIWFYLLQKGDSGKVSAFLFLA 246
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P IVS +L +PI I ++ + + P
Sbjct: 247 PFFGIVSGWLVLGEPIGIPLLIGGSLIFSGIFLVNWPEKR 286
>gi|228899506|ref|ZP_04063762.1| Transporter, EamA [Bacillus thuringiensis IBL 4222]
gi|228860096|gb|EEN04500.1| Transporter, EamA [Bacillus thuringiensis IBL 4222]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 302
Score = 36.8 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|228924473|ref|ZP_04087677.1| Transporter, EamA [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228835182|gb|EEM80619.1| Transporter, EamA [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 316
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 99/306 (32%), Gaps = 23/306 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFLLSGVMLLLFFKMLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNMRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
Query: 309 GKNKTK 314
+ + +
Sbjct: 309 MEQEKQ 314
>gi|170018100|ref|YP_001723054.1| carboxylate/amino acid/amine transporter [Escherichia coli ATCC
8739]
gi|169753028|gb|ACA75727.1| carboxylate/amino acid/amine transporter [Escherichia coli ATCC
8739]
gi|332996089|gb|EGK15716.1| carboxylate/Amino Acid/Amine Transporter family protein [Shigella
flexneri VA-6]
Length = 307
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLIVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|297243428|ref|ZP_06927361.1| permease of the drug/metabolite transporter (DMT) superfamily
[Gardnerella vaginalis AMD]
gi|296888675|gb|EFH27414.1| permease of the drug/metabolite transporter (DMT) superfamily
[Gardnerella vaginalis AMD]
Length = 335
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/287 (6%), Positives = 72/287 (25%), Gaps = 4/287 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +WG + + +++ LE V ++ R++ + + K +
Sbjct: 32 IMLLICAAIWGGSYVSSKYALEVFPVQWLMGVRMVGACTIMAIIFFGTLRKTFTKKLIVP 91
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + V L +
Sbjct: 92 SLLTGITYYATLILQTEGLRSIDPGRSAFLTAAYCVITPFSAWLIVKKKPTLLGLVAAVM 151
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ + L ++ L + A+ + +
Sbjct: 152 CVAGVGFVALKPGMLVLTLSYGDFLTLLCAAVFAFNLTFLAYYSRKYNPVTLTFGQFVVS 211
Query: 207 ALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V + ++ + +Y + + ++
Sbjct: 212 GVLFVAGALICEPLPNFNAADHFSIFANMFYLTVVVTVVAQIMQNYSLVNLSTANASVIM 271
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T L ++ S + + + + + F ++ A++ L +
Sbjct: 272 CTESLFTLLFSTILFHEHVSNMAFVGFALIFAAIITASLGEHYCDKR 318
>gi|253574038|ref|ZP_04851380.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846515|gb|EES74521.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/295 (8%), Positives = 81/295 (27%), Gaps = 6/295 (2%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ ++WG + + + L V R + L + ++
Sbjct: 6 YFALIMLSLIWGGSFFFIKILLPDFGPWTVAFLRSAFGLATITGVMLVLRKPFGFRSIPW 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ + + + + + V +F + +
Sbjct: 66 LAMVIMALINTAIPWALIGFSETRLTSSLASVLNATTPLWTLVVGVIFFRVATSRMQWAG 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-----FIEM 200
+ I L++L + T + + LL A + + + S G
Sbjct: 126 MGIAFLGLLVLVGVSPTSLASVDLLGFACMLAATLCYAVGTHLSKRLSGGLSMYQVTFGT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ A+ + + + + +F + +++
Sbjct: 186 LISAMGGSGLMALIAERDSLAPLAKLPTLGAVIGLGVFGSGVAYILFYFMVQKGTPQFAT 245
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ Y P I+ +L +P+ + ++ + + ++G+ ++
Sbjct: 246 TVTYLVPASAIIWGFTLLNEPVSWRLLVGLVFILGGVYLANRSGSGSAGQEAKRQ 300
>gi|302873437|ref|YP_003842070.1| hypothetical protein Clocel_0531 [Clostridium cellulovorans 743B]
gi|307688389|ref|ZP_07630835.1| hypothetical protein Ccel74_09533 [Clostridium cellulovorans 743B]
gi|302576294|gb|ADL50306.1| protein of unknown function DUF6 transmembrane [Clostridium
cellulovorans 743B]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 108/295 (36%), Gaps = 22/295 (7%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + L F + I++G++ L+T+ L+ S + +++ R L + + I++
Sbjct: 3 NKRKALPYLTAFMSSIIFGLSFLFTKRALDVSSPITLVAFRFLIATIVMTALILF----- 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++K KN + + + +++ F Y L + + P+ LG F
Sbjct: 58 KVIKVNYKNKPLGWLFLLAMFEPVIYFIFETYGLQYTASSIGGLMISLIPIAVTILGVYF 117
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLS--------LAIAVTWSAYCFARKTIPV 190
LKE+ Q+I L + + ++ + + + AV +A+
Sbjct: 118 LKEKPTVKQVIFILTSVSGVALIGIMGSSGDTNNSLLGILLMFGAVMSAAFFTIISRKIS 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG--------NIPDTLFLIGYGLLNSF 242
I ++ A+ + V + F + L + L +
Sbjct: 178 NQFNAIEITYFMMITGAVCFNVISLFEHIINKNLSAYLEPLKSTTFLSSVFYLGILSSII 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + ++ + + + S + + ++ I + V L++ + ++++ +
Sbjct: 238 AYFLINFSLSKLEASKTTVFSNISTIVSIFAGVIFLRESFHLYHAVGSVLILLGV 292
>gi|228919675|ref|ZP_04083037.1| Transporter, EamA [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228840029|gb|EEM85308.1| Transporter, EamA [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQIVGTMVVVTGCYLFS 302
Score = 36.8 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|222095314|ref|YP_002529374.1| transporter, eama family [Bacillus cereus Q1]
gi|221239372|gb|ACM12082.1| transporter, EamA family [Bacillus cereus Q1]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLTVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTASDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|163733926|ref|ZP_02141368.1| transmembrane protein, putative [Roseobacter litoralis Och 149]
gi|161393037|gb|EDQ17364.1| transmembrane protein, putative [Roseobacter litoralis Och 149]
Length = 294
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/273 (10%), Positives = 82/273 (30%), Gaps = 5/273 (1%)
Query: 41 PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATI 100
L+ + + L + R+ + + I+ G + +
Sbjct: 22 ALFVRLI-DAGALTIAFWRLFLAGFFLGLGILALHGTAPFRAVLKTGRYGLIHMAGVGAS 80
Query: 101 LAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLI 160
+ I A+ F P+ + VFL E ++ ++ +++ L +
Sbjct: 81 GVLF----IQAVALTSVANVVFIIASLPIFAAIYSRVFLAEPISLRMLLTMASVLVGLAV 136
Query: 161 MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
+ SG + + A + ++ V ++ +
Sbjct: 137 IAFGSGETENASLAGDALALAVSALFAAALTAARRVKHVSMVPSVAMGYVAAALVLLPFA 196
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
F ++ +G + + G + + VG++ L + + ++ +
Sbjct: 197 APFSVPPDQVSLVLCHGGFILGSSVLLAIGPRYITSAEVGLLVLLESALAPLLAWAVVGE 256
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
IV+ A++V + + N K++
Sbjct: 257 NPGRYAIAGGAIVIGALLVSNIAMLRNQQKHRA 289
>gi|260778128|ref|ZP_05887021.1| permease [Vibrio coralliilyticus ATCC BAA-450]
gi|260606141|gb|EEX32426.1| permease [Vibrio coralliilyticus ATCC BAA-450]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/281 (9%), Positives = 78/281 (27%), Gaps = 1/281 (0%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + +I RV ++ +F +Y L+
Sbjct: 13 AAIWGGSFLFMKIAANTFGPAYLIEFRVGFAAISLFLVSLYLRKKLAFRNHFKHFMIIGL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L + + A T+ + + + K L ++ +
Sbjct: 73 FNTALPFLLFAYAAQTLNASTLSVLNSTAAIWGALIGVFWHKSLLTGKAIFGMLLGVSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
++++ + + L A + Y A F A+ +++
Sbjct: 133 VVLVGWDAVNIGISAALPIAAGVMAACCYGIATNYTKTAPKVAAFENAHGNMWAAVLWIL 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ + + ++ + ++ + + P+ I+
Sbjct: 193 PLLPFVPMQGEPSTHEMLSVVALGVVCTGVAYLLYFRLVADEGAASALSVTFLIPVFGIM 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
IL +PI +V+ ++ + + K
Sbjct: 253 WGSLILDEPIGLNTFAGTVLVLSGTMLVTGFSPVQLLKKSR 293
>gi|268316817|ref|YP_003290536.1| hypothetical protein Rmar_1258 [Rhodothermus marinus DSM 4252]
gi|262334351|gb|ACY48148.1| protein of unknown function DUF6 transmembrane [Rhodothermus
marinus DSM 4252]
Length = 305
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 84/281 (29%), Gaps = 13/281 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + L + ++WGI + L + V R ++SL + +
Sbjct: 1 MSQSRLKYELALLFDVLVWGINFPILKVALAAMHPFVVNLFRFIFSLLVLGALHAWTHRR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L+ ++ FI + + P+ + + +
Sbjct: 61 DRTPFFEPLRTHGRAILLLGLLGYVIYQLAFIEGVNLTTSGSAALIMASAPLWTAVISQL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFAR 185
+RLN L I L+ +L ++ L+ G L++ A + ++
Sbjct: 121 RGYDRLNLLGWIGLLVSLLGTAVVVLYGPRALDFSEDALLGNLLMTGAAVAWGAYTALSQ 180
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ +LA P L + + + L
Sbjct: 181 PFVHRMDPASLTFFSLLLAYPILALLGLLHIDAVVWADVDATIWAALIFSGALSTGLTVA 240
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+++ I+ S P++ +V+ +L +PI +
Sbjct: 241 FWNHAIRHVGPSHTAAFGNLVPVVALVAGYLMLGEPITPAQ 281
>gi|228959285|ref|ZP_04120980.1| Transporter, EamA [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228800355|gb|EEM47277.1| Transporter, EamA [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 312
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/309 (11%), Positives = 93/309 (30%), Gaps = 17/309 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 69 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 124 KQERFSMKVQIGSIVAFVGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + VV+ F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 244 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIQK 303
Query: 308 SGKNKTKKS 316
N K S
Sbjct: 304 QALNLKKVS 312
>gi|229197229|ref|ZP_04323961.1| Transporter, EamA [Bacillus cereus m1293]
gi|228586261|gb|EEK44347.1| Transporter, EamA [Bacillus cereus m1293]
Length = 309
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|209521616|ref|ZP_03270312.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
H160]
gi|209497943|gb|EDZ98102.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
H160]
Length = 345
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 74/280 (26%), Gaps = 5/280 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + +WG+ + L + V + + +F +V ++ L
Sbjct: 12 LAIMLGASVWGMVWYPLRMLAALGVTGTAASALTSGTGCLFVLLVRRRALKTVRWHWLLP 71
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
A+ V + + + +L +++ I +
Sbjct: 72 ALALAAGVTNLGFVWGAIHGQVMRVLLLFYLTPAWTALFAHFILHERLTRSGAALAALSL 131
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
A ++ L + + + A EM I
Sbjct: 132 AGAMTMLWSPQLGIPVPGNPAEWAGLAGGMGFAMSNVLILKTSRVLPDMKPEMRTATIFG 191
Query: 208 LFYVVWNGFSGGEHFFLGN-----IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
++ S E L ++G GLL + + +G+ R + I+
Sbjct: 192 GAALLGALASLVEPMPAPPVGAHLGTAALLVLGLGLLLASNNMLVQHGLSRVPANRASII 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ +S+ + +V+A +
Sbjct: 252 MLFELVVTALSAWLFAGEIPGPREWAGGACIVLASALSSW 291
>gi|42779605|ref|NP_976852.1| EamA family protein [Bacillus cereus ATCC 10987]
gi|42735521|gb|AAS39460.1| transporter, EamA family [Bacillus cereus ATCC 10987]
Length = 316
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 99/299 (33%), Gaps = 21/299 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSVHAILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|89893697|ref|YP_517184.1| hypothetical protein DSY0951 [Desulfitobacterium hafniense Y51]
gi|89333145|dbj|BAE82740.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 301
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 82/290 (28%), Gaps = 6/290 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G LFV ILWG + ++ + ++ R ++ + AI + + K
Sbjct: 7 LGILFV---TILWGASFAVSKLIMADITPNYYTFLR--FAGAFLVLAICFHKRLRHIPKQ 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
TL+ +G+ + +L + A + L
Sbjct: 62 TLQAGVLIGLAIACGYVLQTMGLNYTTASKAGFLAGLYVVLVPVMESFLCKCLPRYNMIL 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
A L ++ T+ G L+ + + + I +
Sbjct: 122 GVCLATAGLALLSLERDFTIGFGDLLVFVGAVFFAVSMVLISRFASKHDPMVLAIIQIGV 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ G + L L + + ++ +T ++
Sbjct: 182 TALFSLVLAVFTEPGLSAVQFTPVLLGLVLFAILFGTAVNTAVQNWAQGYLTATTAALIF 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P+ V ++ I + +++ M+V LL ++K
Sbjct: 242 VLEPVFGGVFGWLLVGDVIGMKQISGSALIISGMLVTLLLKPGQRAQSKA 291
>gi|163939499|ref|YP_001644383.1| hypothetical protein BcerKBAB4_1510 [Bacillus weihenstephanensis
KBAB4]
gi|163861696|gb|ABY42755.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 301
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 89/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKKAS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 62 KQDIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 118 KQKATIFIVLGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 178 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTSLFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 296
>gi|320666190|gb|EFX33196.1| YicL [Escherichia coli O157:H7 str. LSU-61]
Length = 307
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSLSPAALFWGIASAFTAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYAGQGTNFIVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|254723770|ref|ZP_05185556.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
gi|254734533|ref|ZP_05192245.1| transporter, EamA family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254759720|ref|ZP_05211744.1| transporter, EamA family protein [Bacillus anthracis str. Australia
94]
Length = 301
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + + LL F ++ V+ L +FL
Sbjct: 62 KQHIKQSSL----AGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 118 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 178 LLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 296
>gi|226360130|ref|YP_002777908.1| hypothetical protein ROP_07160 [Rhodococcus opacus B4]
gi|226238615|dbj|BAH48963.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 301
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 80/282 (28%), Gaps = 6/282 (2%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ WG + L+ + LE +S +V+ R+++ + + L T +
Sbjct: 10 AGTALAWGASFLFIKVGLEGLSFTQVVLWRLVFGAVTLGAVLGITRTRLPRAAATWAHLS 69
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL-----GSVFLKERLN 144
+ + L W + + + V FL L L
Sbjct: 70 VLAVAQCLLPWLLFSWAEQSISSGLASIYNATTPLMTMSVALAFLPGEKLTDAKLFGLLL 129
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +L I+ A A A + R+ + I ++
Sbjct: 130 GFGGVVVVLAPWQSGILGSVPAQLACLGATASYGVALVYLRRFVLPRGVSTPTIAFMQVS 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
I A V+ ++ L + F + ++ + + Y
Sbjct: 190 IAAAAMVLATPWAASTPMHLTPAIVASMIGLGAFGTGLAFVWNTNVVRGWGPTAASTVTY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P++ + L + I + + V+ +VV +
Sbjct: 250 LTPVVGVALGAVALDERISWNQPVGALAVIAGIVVTQRSSRK 291
>gi|255306379|ref|ZP_05350550.1| hypothetical protein CdifA_07282 [Clostridium difficile ATCC 43255]
Length = 314
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/308 (11%), Positives = 100/308 (32%), Gaps = 18/308 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F+ A +LW L+ +FL ++ +V R+ + + + +
Sbjct: 3 EKSKGYVFIAIAGLLWATLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQIL 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ A+ + A+ + + + +P+ +
Sbjct: 63 KI----NKKGIIYSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKLCY 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE + ++ + +L + ++ LL ++ A +
Sbjct: 119 KENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGVLSAIAYALMPTISKNALK 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I + A+F + + ++ + L+ + + + ++ GI
Sbjct: 179 EFSSSTILVYSFLFGAIFMIPSSRPWEILNYAKDLDVLSCMLMLGIVPAALAYIFYAAGI 238
Query: 252 KR-AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV---YLLPTVIN 307
+ +LS G++ + ++ IL + + +++I+ VV +
Sbjct: 239 SKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRI 298
Query: 308 SGKNKTKK 315
K+ K
Sbjct: 299 FYKSNKLK 306
>gi|59712324|ref|YP_205100.1| drug/metabolite exporter family protein [Vibrio fischeri ES114]
gi|59480425|gb|AAW86212.1| transporter, drug/metabolite exporter family [Vibrio fischeri
ES114]
Length = 297
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/282 (10%), Positives = 84/282 (29%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F A +W + ++ + + + +R +++ + + +
Sbjct: 3 IFFPITAVFIWATNAVISKLATEAIEPGAIAFYRWFFAIFILLPFCI----KPVWQQRQQ 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + ++ + ++ YA T + + P+ +FL L +L
Sbjct: 59 IKAHLGKLTILASLGMVLNQCLAYYAAHTTSATNIAVFLSLMPLFGLFLAVPLLGNKLKK 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+I A++ L+ M GI + ++ AY +
Sbjct: 119 QALIGAIISFSGLIYMLSEGNPMSLLSNGIKQGDGLMFISSLAYALYSVLLNKWKLPLAP 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + + + L + + G++R S
Sbjct: 179 WTSVFCQVVIGAALQLPLLLTSDSYMINHTALPMVLFAAAFASVIAPWCWLQGVQRIGSS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ ++ S L + I V+I +++
Sbjct: 239 QATLFMNLVPVFTVIVSFIFLGKVPTWYHLIGGSAVLIGLLL 280
Score = 36.4 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 33/138 (23%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
+ + AV A + + E I + + +
Sbjct: 1 MTIFFPITAVFIWATNAVISKLATEAIEPGAIAFYRWFFAIFILLPFCIKPVWQQRQQIK 60
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
I L C+ Y + + + PL + +V +L +
Sbjct: 61 AHLGKLTILASLGMVLNQCLAYYAAHTTSATNIAVFLSLMPLFGLFLAVPLLGNKLKKQA 120
Query: 287 TIVFGIVVIAMVVYLLPT 304
I I ++ L
Sbjct: 121 LIGAIISFSGLIYMLSEG 138
>gi|51243971|ref|YP_063855.1| hypothetical protein DP0119 [Desulfotalea psychrophila LSv54]
gi|50875008|emb|CAG34848.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
LSv54]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 88/282 (31%), Gaps = 17/282 (6%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
W T + + L Q + R + +F + G + + +
Sbjct: 19 MFFWAGTFVAGRILGQNLPPSVAGFLRFFVASSSLFLVLRIKFGAIPRPEKEQ----LLP 74
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L+ T + + FF L + + TP++ ++FLKERL+ + L
Sbjct: 75 LLLLGFTGIFAYNIFFFKGLQHIEAGRAALFIAATPLMITITATLFLKERLSLKGFLGVL 134
Query: 153 LIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L +I+ + G L A + +RK + S
Sbjct: 135 LSFTGAVIVISNGHPEKVLQGGFGIGEQSLLGCAASWAAYTLASRKVLISMSPLSAVCFS 194
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
C+L LF + ++ L + FC + +K +
Sbjct: 195 CMLGTAMLFPFAIGDGLFTLMPQITDLGWICVLYMGVGGTALGFCWYYKALKAIGTTKTS 254
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I P+ ++ FIL + ++ +V+ + +
Sbjct: 255 IFLNLVPIFTLILGHFILGEYVNISVLAGGLLVLTGVTITNF 296
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 12/129 (9%), Positives = 34/129 (26%)
Query: 176 VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
+ + A F I + + + + G L+
Sbjct: 19 MFFWAGTFVAGRILGQNLPPSVAGFLRFFVASSSLFLVLRIKFGAIPRPEKEQLLPLLLL 78
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
F G++ + + PL++ +++ LK+ + + +
Sbjct: 79 GFTGIFAYNIFFFKGLQHIEAGRAALFIAATPLMITITATLFLKERLSLKGFLGVLLSFT 138
Query: 296 AMVVYLLPT 304
V+ +
Sbjct: 139 GAVIVISNG 147
>gi|119774220|ref|YP_926960.1| integral membrane domain-containing protein [Shewanella amazonensis
SB2B]
gi|119766720|gb|ABL99290.1| integral membrane domain protein [Shewanella amazonensis SB2B]
Length = 290
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/294 (14%), Positives = 110/294 (37%), Gaps = 10/294 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M L + A L L + L+ V +++ +R L++ V + GGL +
Sbjct: 1 MQALLMILLAQWLIATGSLLIKLLDPNTGVFQLVLYRQLFATLLVLPFVWRLQGGLRISP 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + A ++ + G F A++ + +++P++ + + + FLKE
Sbjct: 61 -------LYRVHMVRALLIGLGNGLFFIAIMNLPLASVTAVLYLSPLMLLVMSAAFLKET 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + +A ++ +L+++ S L + A A + +
Sbjct: 114 IGYRHSVAGIIGFCGILMISQPSS--LNPYLLLAVLGALISASNNLILKRYSAAEHPFST 171
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L F +V+ + ++ + L + + + +RA S +
Sbjct: 172 LFWSNAFAMVFLIPAAVFEGASLVWDASIVGMLLALFYLGMTYLVIHAYRRADASQLAPA 231
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
EYT + + ++ L + + + I +V+ + V+ + P + + + ++
Sbjct: 232 EYTGLVFATLLGLWFLGEVPNWLSLIGIALVMCSAVLPVYPELKGLWRQRVSRA 285
>gi|323693508|ref|ZP_08107714.1| hypothetical protein HMPREF9475_02577 [Clostridium symbiosum
WAL-14673]
gi|323502430|gb|EGB18286.1| hypothetical protein HMPREF9475_02577 [Clostridium symbiosum
WAL-14673]
Length = 302
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 13/276 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L A +G + + ++ E+ R + + + + L +
Sbjct: 10 LMNITAMAAFGTLGYFVAKI-PLASEEIAFFRAVIAAVVILAWQLVRGRKFRL----PAS 64
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K++ +L+ S ++ +W F A + + SY+ PVI + + +ERL+ Q
Sbjct: 65 RKSLILLMASGAMIGFNWIFLFEAYHYTSVSVATLSYYFAPVIVMAACPLLFRERLSLKQ 124
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFFIE 199
II L+++ G+ S + A A G
Sbjct: 125 IICFACSTAGLVLVISSGGLEGGSSNVTGVGYGLGAAVLYACIILINKSLTGIDGIDRTL 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + + SG G + L+ + +C++ + K
Sbjct: 185 LQFLVGLIVMFPYVLFKSGFHVMEAGTVGIMNLLVLGVVHTGIGYCLYFSSLGDLKGQEA 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
I+ Y PL+ SVF++ + + ++ +++
Sbjct: 245 AILSYIDPLVACAMSVFVMGEAMGLMQAAGGVMILG 280
>gi|297162162|gb|ADI11874.1| hypothetical protein SBI_08756 [Streptomyces bingchenggensis BCW-1]
Length = 346
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/294 (8%), Positives = 75/294 (25%), Gaps = 28/294 (9%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + +G + + + L + L V RV+ + + +
Sbjct: 16 GLGLALTSALAFGGSGVAAKPLIEAGLEPLHVTWLRVVGAALVMLPVAWNHRDLPAKRPA 75
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ F +A + A+ + ++ P + + + +
Sbjct: 76 L--------LVGFGLLAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRPV 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + +L + L + + A + V S G E
Sbjct: 128 SGAAAVGVVLAVGGLACVVEVWSGLSFDAVGLLLALAAAGCQVGYFVLSDHGSDGENAAD 187
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTL------------------FLIGYGLLNSFVFC 245
+ + Y + G D + +
Sbjct: 188 PLGVIAYGLIVGALALTVVARPWNLDWAVLAGRADLAGARVPAVLLLGWIVLVATVVAYL 247
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R G++ ++ V + +L + + + +V+ +
Sbjct: 248 TGVVSVRRLSPQVAGVVACLEAVVATVLAWVLLDEHLSPPQIAGGAVVLFGAFI 301
>gi|256027593|ref|ZP_05441427.1| transporter [Fusobacterium sp. D11]
gi|289765552|ref|ZP_06524930.1| transporter [Fusobacterium sp. D11]
gi|289717107|gb|EFD81119.1| transporter [Fusobacterium sp. D11]
Length = 301
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/302 (10%), Positives = 87/302 (28%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L F LWGI + FL + V+ +I +R++ + +Y+
Sbjct: 1 MKKDNNFGMLTTFIGGTLWGINGVMGSFLFLNKNVTTAWLIPYRLVL-AGLLLLGYLYYK 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + +++F + + A+ + + + P + +
Sbjct: 60 KDSKIFDILRTPKDLLQIILFGLIGMLGTQYTYFSAIQYSNAAIATVLTYFGPTLVLIFI 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ K + +I+A L + ++ H L + S + +
Sbjct: 120 CLKEKRKPLKYEIVAIALSSFGVFLLATHGNITSLQISFKALVWGMLSALSVVFYTVQPE 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + I + + + ++ F ++
Sbjct: 180 KLLEKYGPPTVVAWGMIIGGIAITFVTKPWNIDVIFDFTTFFVLMLIILFGTITAFILYL 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + I+ P+ + ++ L + + F ++ + +
Sbjct: 240 TGVNIIGPTKASIIACIEPVAATICAILFLGINFGFLDLLGFICIISTIFIVAYFDRKTK 299
Query: 309 GK 310
K
Sbjct: 300 KK 301
>gi|228932977|ref|ZP_04095840.1| Transporter, EamA [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228826578|gb|EEM72349.1| Transporter, EamA [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGLFSSICAFLFEDWEKIFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|228961816|ref|ZP_04123401.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228797868|gb|EEM44896.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 310
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 104/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKELQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 64 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEKIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALIEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 244 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGV 288
Score = 40.3 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKELQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S LK+
Sbjct: 61 VVHKKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGAIGVLFITIPS 143
>gi|229156633|ref|ZP_04284721.1| Transporter, EamA [Bacillus cereus ATCC 4342]
gi|228626802|gb|EEK83541.1| Transporter, EamA [Bacillus cereus ATCC 4342]
Length = 309
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSIKVQIGSIIAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|169634695|ref|YP_001708431.1| hypothetical protein ABSDF3372 [Acinetobacter baumannii SDF]
gi|169153487|emb|CAP02641.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii]
Length = 294
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 83/286 (29%), Gaps = 6/286 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSMFLFKVPVSQ 61
Query: 79 SLLKD---TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ K + + + + + F A + ++F G
Sbjct: 62 KVAFISSTPSKLSVFTQIAICAFLGIFSLFFFETIAYNHGAAANVVVLMASAAISALFFG 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 122 RFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKLN 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G L + Y+ + + L F + +
Sbjct: 182 GGLFLTKYLLLFGSVYLAVPFLINLHSITFNSDIILGLIGLAVLPTILGFFCTTKALSYM 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 SAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 287
>gi|30018662|ref|NP_830293.1| drug/metabolite exporter family protein [Bacillus cereus ATCC
14579]
gi|229125904|ref|ZP_04254929.1| Transporter, EamA [Bacillus cereus BDRD-Cer4]
gi|29894203|gb|AAP07494.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
gi|228657562|gb|EEL13375.1| Transporter, EamA [Bacillus cereus BDRD-Cer4]
Length = 316
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 99/299 (33%), Gaps = 21/299 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGFMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVVLVNMPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
>gi|108803583|ref|YP_643520.1| hypothetical protein Rxyl_0739 [Rubrobacter xylanophilus DSM 9941]
gi|108764826|gb|ABG03708.1| protein of unknown function DUF6, transmembrane [Rubrobacter
xylanophilus DSM 9941]
Length = 294
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 82/281 (29%), Gaps = 14/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +G + + + E+V + + R + ++ + F L K
Sbjct: 14 LSLLLTAFFFGTNFVAVKHVVEEVPPVLFAAARFTAAGLLLWAVLRLFEPASRL-----K 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + F + T+ Y PV + LG ER
Sbjct: 69 RADLPPVAGLGLLGITATQTVFTIGVHHTTAANTAVIYSTAPVWGMLLGFALGLERPRLS 128
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ + + + + + + S LA+
Sbjct: 129 GVAGVAMCLAGVAAIEGGGLRLAGTSLLGDALILLAAVFWGSYTVLSLPLLRRYTPLAVA 188
Query: 207 ALFYVVWNGFSGG--------EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
A ++ + E LG L ++F F + G+ R +
Sbjct: 189 AYPMLLGGLAAFPLAALDLRVEPSALGGSVWFAALYSTLFSSAFGFVGWQKGVARVGANR 248
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
V + +Y L + + + +L + ++ + +V++ + +
Sbjct: 249 VLVYQYLVALSGVAAGMVVLGEGFGPLQALGAAVVLVGVYL 289
>gi|330810247|ref|YP_004354709.1| hypothetical protein PSEBR_a3383 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378355|gb|AEA69705.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 309
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 89/295 (30%), Gaps = 15/295 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ +WG + + ++ + + R + V+ ++ LSL + +
Sbjct: 13 ALMTGLCAIWGFQQVAIKAGAADMAPMLQLGVRSAIAAALVWLLVLVRGERLSLADGSWR 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
VG+L ++ T + F Y ++ L ERL
Sbjct: 73 PGLLVGLLFALEFVMVGEGLRH-----TTASHMVIFLYTAPMFAALGLHWKLPSERLKPA 127
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVGSSEGFF 197
Q + + +++ ++ W A + + +
Sbjct: 128 QWLGIAVAFGGIVVAFSGGSGAANGSSLLGDGMGLLAGALWGATTVTVRCSRLTNLPASQ 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + + + G L++ F I+ ++ S
Sbjct: 188 TLLYQLVGAGVLLIGLSIALGQTTINPTPQLIASMAFQVLLVSFASFLIWFSLLRHYLAS 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+G++ + PL I V++L +P++ + +V+ +++ +
Sbjct: 248 QLGVLSFMTPLFGIGFGVWLLDEPLEPNFIVGAVLVLGGILLVSGYGWFRQRWGR 302
>gi|313141009|ref|ZP_07803202.1| permease of the drug/metabolite transporter superfamily protein
[Bifidobacterium bifidum NCIMB 41171]
gi|313133519|gb|EFR51136.1| permease of the drug/metabolite transporter superfamily protein
[Bifidobacterium bifidum NCIMB 41171]
Length = 315
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/312 (12%), Positives = 92/312 (29%), Gaps = 17/312 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVY 73
S L G + + C +LWG + + V + ++ R++ + +
Sbjct: 10 STMKKGLSPTTGRVMLLCCAMLWGGSYPIAKVAMGVVTPQWLMGLRLVGASTIMLIL--- 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
N + + + L + ++F V+ F
Sbjct: 67 ----FRKRIVPYLNKSIIIPGLVTGLTYWGTMISQTVGLTMIEPGRSAFLTSAYCVLVPF 122
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCFA 184
+ + +++R I+AA L + + ++L SG+ L++ +
Sbjct: 123 VSWLLMRQRPAARNIVAAALCLTGVGFVSLGSGLGGLTIGTGDLLTLLCAVIFSFNLVCL 182
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
K V V A +L + +
Sbjct: 183 GKWSRVIDPVALTFAQFVTAGVCFIVGASFSEPAPNASWLAPGVLACLVYLFLGATMLAQ 242
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + G+K S I+ + +V SV + + F ++ +A++V +
Sbjct: 243 IMQNVGLKVTPPSQASIIMCLETVFSMVFSVLFYGETVSGAAATGFALIFLAILVSQIRL 302
Query: 305 VINSGKNKTKKS 316
+ +K+
Sbjct: 303 NGRLLERVGRKA 314
>gi|241764256|ref|ZP_04762287.1| protein of unknown function DUF6 transmembrane [Acidovorax
delafieldii 2AN]
gi|241366379|gb|EER60901.1| protein of unknown function DUF6 transmembrane [Acidovorax
delafieldii 2AN]
Length = 291
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 80/293 (27%), Gaps = 7/293 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L L + ++W I + T+ LE + EV R ++L + + G
Sbjct: 3 KLTHSRAVLLMVAVTLMWSIAGVVTRHLEHAASFEVTFWRSFFTLLSLLVILPVLQG--- 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ L S +V + F+ AL+ + P+++ +F+
Sbjct: 60 -RAVFTSMRHSGRALWISGVCWSVMFTAFMVALVLMPVANVLVTMAAGPLLTALFSWLFI 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI---PVGSSEGF 196
R+ A + L + M L V A G
Sbjct: 119 GHRIAPRTWAAIGVAGLGIAWMYGSQMAGLPLAGTLVALCVPVAAAINWTVVQYSQRHGH 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+++ + V L + + + + + K
Sbjct: 179 AVDLVPAVLVGAVISVMATLPLAMPLQASGHDLALLALLGVVQLAIPCVLAVRCGRVLKA 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + I+ + + + +V+ A+V L
Sbjct: 239 PEMALLGLLEVIFGILLAWLGAGEKPGSAVLTGGALVIGALVFNELLGWKEQK 291
>gi|228917061|ref|ZP_04080620.1| Permease of the drug/metabolite transporter [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228842589|gb|EEM87678.1| Permease of the drug/metabolite transporter [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 90/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + + ++ + + R + + + S L
Sbjct: 2 YVIMLFVPLFWGGSFATAEHVITEIPPITAATIRFGLAGCILIGIVF----MKSEWNTGL 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 58 LLKNWKGLLFVSLTGIFGYNVFFFMGLTYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 117
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + SS
Sbjct: 118 KVGISLILSLIGVIVVITSGSLNTLMSLSFNKGDLLFITALICGVLYSLTGKKVMRGVSS 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 178 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 238 LGASKASMYLNLTPIVATSISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 294
>gi|110633262|ref|YP_673470.1| hypothetical protein Meso_0908 [Mesorhizobium sp. BNC1]
gi|110284246|gb|ABG62305.1| protein of unknown function DUF6, transmembrane [Chelativorans sp.
BNC1]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 94/296 (31%), Gaps = 16/296 (5%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ ++ + V +++ R +++ + + T + K
Sbjct: 3 IASVSIFLAMSALIKAAGNVPAGQIVFFRSFFAIFPIVVMLA-----WQRELGTAFHTKH 57
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
V A + GF + L + P++ V ++FL E + + A
Sbjct: 58 PMGHVLRAIVGVASMGFGFFGLTRLPLPEAVTLSYAQPLLVVVFSAIFLHETVRIYRWSA 117
Query: 151 ALLIILSLLIMTLHSGIPLLSL-----------AIAVTWSAYCFARKTIPVGSSEGFFIE 199
L+ + ++I+ + IA A A + V
Sbjct: 118 VLIGFVGVVIIAWPNLTLFAGDGPGMETEQAIGVIATLVGAAFSAVAMLLVRRLVHTEKT 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ ++ V + + + + LFL G G+ + + A+LST+
Sbjct: 178 STIVMWFSVTATVISLGTIPFGWVWLSFWQFLFLAGAGICGGIAQIFMTQCYRHAELSTI 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
EYT+ +L IV F + IVV+A ++ + K +
Sbjct: 238 APFEYTSMVLAIVVGYFAFSDIPTIYTLVGGLIVVVAGLLIIWRERRLGLKRVAAR 293
>gi|313887298|ref|ZP_07820989.1| putative membrane protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|332299232|ref|YP_004441153.1| protein of unknown function DUF6 transmembrane [Porphyromonas
asaccharolytica DSM 20707]
gi|312923217|gb|EFR34035.1| putative membrane protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176295|gb|AEE11985.1| protein of unknown function DUF6 transmembrane [Porphyromonas
asaccharolytica DSM 20707]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 96/292 (32%), Gaps = 17/292 (5%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + C I++GI +T+ L ++ + R L + + A ++ KD
Sbjct: 9 LVMLCVTIIFGINGPFTKALLGGGLTPYTHMFCRFLGATILFWIASLWVPRERIDRKDWG 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T + + G F + S + P++++ L +V LKE +
Sbjct: 69 K------MTLASLTGIFFNQGLFAIGMSMTSPVNQSLVATLGPIVTMLLAAVVLKEPITR 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L+ I L+ L++ +G + A I + S + + + +
Sbjct: 123 LKGIGVLIGASGALLLVSTNGSSTAGSTLGDLICATATVSYAIYLTSFKTLIQKYHPVTL 182
Query: 206 PALFYVV---------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+V+ E + + + + +
Sbjct: 183 MKWLFVISLYGSAPMGVRDMIRTEWSTFDATFYGQLAFVVVGATFVAYLLLLFAQRGLRP 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ V I Y P++ + +V + + + + ++++ + +
Sbjct: 243 TVVSIYNYGIPVIASMLAVMMGQDHLTLAKVASAILILLGVFMVTRSKSRQQ 294
Score = 36.0 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 38/135 (28%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
L + + VT T + + W +
Sbjct: 5 WRLHLVMLCVTIIFGINGPFTKALLGGGLTPYTHMFCRFLGATILFWIASLWVPRERIDR 64
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+ F +F+ G+ ++ P++ ++ + +LK+PI ++
Sbjct: 65 KDWGKMTLASLTGIFFNQGLFAIGMSMTSPVNQSLVATLGPIVTMLLAAVVLKEPITRLK 124
Query: 287 TIVFGIVVIAMVVYL 301
I I ++ +
Sbjct: 125 GIGVLIGASGALLLV 139
>gi|310287758|ref|YP_003939016.1| transporter, drug/metabolite exporter family [Bifidobacterium
bifidum S17]
gi|309251694|gb|ADO53442.1| Transporter, drug/metabolite exporter family [Bifidobacterium
bifidum S17]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/309 (7%), Positives = 77/309 (24%), Gaps = 26/309 (8%)
Query: 27 TLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL----- 80
+ ++WG + Q + +S L + R + +++
Sbjct: 1 MACLVLTSLIWGFAFVSQVQGMASMSPLFFNATRFTLGAISLIPLLLWKRLRRCRESGKT 60
Query: 81 ---------------LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ + + + ++ + A + R F
Sbjct: 61 VGAGNREAGDDEHDMIVGSALSNPLIVGMICGVFLFAASTLQQYGIMFGRSAGRAGFITA 120
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-----LSLAIAVTWSA 180
+ V+ L + L+ + + +A + + ++ + G L +
Sbjct: 121 LYIVMVPLLAYLVLRRAVRMMTWMAVGVAVAGFYLLCITDGFGSPTLADCLLLFTAVLFS 180
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + A G + L
Sbjct: 181 AHILSIDTLGARVDALTLSFIQFVTTAALSWAGTLIEGSMDWNGAGQAWIAVLYAGIGSV 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + G + + ++ + ++ +L + + + ++ +V+
Sbjct: 241 GVAYTLQAVGQQWVPPTRASLIMSLESVFSVIGGALLLGETMTVRGYLGCALIFAGIVLA 300
Query: 301 LLPTVINSG 309
+P V
Sbjct: 301 QMPGVGRRR 309
>gi|228912011|ref|ZP_04075735.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis IBL 200]
gi|228847630|gb|EEM92560.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis IBL 200]
Length = 310
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 102/285 (35%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
+ +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWVGIILGAIGVLFITIPSKSADQEVSLIGDILILLSTFLFAFYTVLLKRPKQERYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALVEILYYGLPKIETWKTGLSVIYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 244 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGV 288
Score = 40.3 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKQLQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I + + I ++ +P+
Sbjct: 121 IRLNYWVGIILGAIGVLFITIPS 143
>gi|82779515|ref|YP_405864.1| putative permease transporter [Shigella dysenteriae Sd197]
gi|309787572|ref|ZP_07682184.1| carboxylate/Amino Acid/Amine Transporter family protein [Shigella
dysenteriae 1617]
gi|81243663|gb|ABB64373.1| putative permease transporter [Shigella dysenteriae Sd197]
gi|308925150|gb|EFP70645.1| carboxylate/Amino Acid/Amine Transporter family protein [Shigella
dysenteriae 1617]
Length = 307
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 105/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ +S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSHMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|56698326|ref|YP_168699.1| hypothetical protein SPO3504 [Ruegeria pomeroyi DSS-3]
gi|56680063|gb|AAV96729.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 311
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 88/293 (30%), Gaps = 8/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P M G L + + + + L ++ + +++ R S ++F
Sbjct: 24 SPNMRGALLMTGSMAAFTCNDTVVKLLGSEMPLFQILVLRSGLSAVWIYFLARRLGALHL 83
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ A+ L + ALL + + P+ ++F
Sbjct: 84 RFGRRDRMLVALRCLSEIGATYFF-----LTALLNMPLANVTAVLQMLPLTVTLGAALFF 138
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ +++A L +L++ AI + C + +
Sbjct: 139 GEQVGWRRMLAIGLGFCGMLLIVRPGPDGFTLHAIYAMAAVICVTARDLVTRRMSSHVPS 198
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK-LST 258
+ V AL + + ++ D + L +FS + R +
Sbjct: 199 LTVTLATALSVMSFGLVGSLTVDWVPLTTDLGLGLLAASLLVLGGYLFSVMVMRIGEVGF 258
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V Y++ L +V + D + +VV A ++ L S
Sbjct: 259 VAPFRYSSLLWALVLGWLVFGDWPDPLTMAGVALVV-ATGLFTLFRERASRHR 310
>gi|21243517|ref|NP_643099.1| hypothetical protein XAC2790 [Xanthomonas axonopodis pv. citri str.
306]
gi|78048503|ref|YP_364678.1| hypothetical protein XCV2947 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|21109080|gb|AAM37635.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
gi|78036933|emb|CAJ24627.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 295
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/272 (8%), Positives = 78/272 (28%), Gaps = 13/272 (4%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L+ + + ++ R+ + + L +
Sbjct: 26 GVVWGCSFLFMRVAAPKFGTVVLVEIRLALGALVLLPFLWLARERFPLHR-------WPM 78
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ A+ + F + + + +T + + + +F ER+ + +A L
Sbjct: 79 LAAIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFLFFGERIGTRRALALL 138
Query: 153 LIILSLLIMTLHSGIPLLSLAIA-----VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ + +L++ L A + +
Sbjct: 139 VGFIGVLVLATGKSAGLSVGPAALAGATASLLYGIGYNLVKRHMGDLPPAASAASTLGCS 198
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + + + + F ++ I+R + + Y P
Sbjct: 199 ALLLAPLAWWQWPTTPVPAVAWACATALGVVCTGLAFLMYYRLIQRIGPARASTVTYLVP 258
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + +L +P+ + +++ ++
Sbjct: 259 VFGALLAWSLLGEPLTWTMLVAAVLILGSVAF 290
Score = 36.0 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 37/119 (31%)
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
++ F + V AL +V F + L ++
Sbjct: 29 WGCSFLFMRVAAPKFGTVVLVEIRLALGALVLLPFLWLARERFPLHRWPMLAAIGVLNSA 88
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F +F++G + A + I L + + + I T R + + I ++V
Sbjct: 89 LPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFLFFGERIGTRRALALLVGFIGVLVL 147
>gi|228913517|ref|ZP_04077146.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228846104|gb|EEM91126.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 320
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNVGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 268 PIFTAILAFLFLGEELTWIQILGTMIVVTGCYLFS 302
Score = 36.4 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 57 WMIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 116
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 117 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 157
>gi|229070521|ref|ZP_04203762.1| Transporter, EamA [Bacillus cereus F65185]
gi|228712603|gb|EEL64537.1| Transporter, EamA [Bacillus cereus F65185]
Length = 309
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 88/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKT 187
+ER + I +++ + + L + A W Y +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S L + + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLLNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINLMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|164687970|ref|ZP_02211998.1| hypothetical protein CLOBAR_01615 [Clostridium bartlettii DSM
16795]
gi|164602383|gb|EDQ95848.1| hypothetical protein CLOBAR_01615 [Clostridium bartlettii DSM
16795]
Length = 301
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 85/281 (30%), Gaps = 13/281 (4%)
Query: 25 MGTLFVFCAYILWG--ITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + + ++WG + ++ L++++ R +
Sbjct: 6 KGEIGLGLTALIWGSGFIGVSISLSGGLTPLQIMTIRFFIGAVLLGIIFF-------KEI 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+AV L + + F + +F + VI F+G V K
Sbjct: 59 KNNITKEAVKAGSMIGVFLFIAFAFQTIGMSYTTASKNAFLTAINVVIVPFIGFVLYKRP 118
Query: 143 LNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L+ II++++ IL + I++ I A+ V +
Sbjct: 119 LDKYGIISSIIAILGIRILSLEADFSINFGDFLTIICAFGFAFHIFFTGEFVKKHNAIVL 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++ + ++ + L + F + + K +
Sbjct: 179 TVVQFSVATVLSLIVQILFNEIKIEVQISSIIGVLYLGIFSTTVAFLLQTVCQKDVSETK 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ + + SV IL + + + ++ A+++
Sbjct: 239 SAIILSLESVFGSILSVIILHEVLTFRMVVGCLVIFCAIII 279
>gi|21228933|ref|NP_634855.1| ABC transporter permease [Methanosarcina mazei Go1]
gi|20907468|gb|AAM32527.1| ABC-Type transporter, permease protein [Methanosarcina mazei Go1]
Length = 321
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 91/287 (31%), Gaps = 4/287 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + A +++G ++ ++L+ +SV +I +RVL+ L + + L K
Sbjct: 9 LELLTACVIYGTVGIFMEYLKDMSVGSIIFYRVLFGLSAILCYLAITGNLSQLALKKKKK 68
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ +++ + + + + + L + ++T + LG ++ + L
Sbjct: 69 YLLLLGILYVSQMFSYYSAIRYLGASSAVLLLYTDPIYLTFLAPALLGEKNTEKTIFALF 128
Query: 148 IIAALLIIL----SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + + L + + + + ++
Sbjct: 129 LGLIGVFYVTRPEGGFEQIAFGSDYLKGVVFGLVGGLFSSGVIISVRYLRNEYNGLTQLV 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ V + F+ + ++ ++ + G+ T I+
Sbjct: 189 WQSVISLVFLSPFAVTLPGQVLVENLYTLMLFGVMITGIGAVFYIRGVAGVSAITGSILT 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P+ I +L + + I ++ A +V L + K
Sbjct: 249 LLEPVSCIFFDYTVLGSDVHSGMLIGCFFILAAAIVISLDNCVFLRK 295
>gi|297243859|ref|ZP_06927789.1| drug/metabolite transporter (DMT) superfamily permease [Gardnerella
vaginalis AMD]
gi|296888280|gb|EFH27022.1| drug/metabolite transporter (DMT) superfamily permease [Gardnerella
vaginalis AMD]
Length = 359
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 83/292 (28%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
++ ++G WG ++ L VS L++ R + + +F
Sbjct: 63 STNAILVGIFLTLLGGAFWGANATVSKILMSTYHVSPLQIACVRQI-AAGMLFVITAAVC 121
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + M + + +++ + + + + +
Sbjct: 122 TPKQLSGAVKTGRTWISMAFTGVVCVLLTQVSYLWTIDWTNSGTATVLQSLNLLFVLVYV 181
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTI 188
+ + I +L +M + L +A S A +
Sbjct: 182 CFRSRRVPTMRETIGVVLAFAGTALMATGGNLSSLSLPVMGLLWGLADAASTAALAIMPV 241
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G + I A F ++ L LF + +F
Sbjct: 242 KLIAKWGNLTVNGITFIIAGFIMLPFVRPWETMPALDLRAMLLFTFTVIAGTFGAYWLFL 301
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI R ++ + P+ +++V + FG++ + M++
Sbjct: 302 EGIMRVGSVRGTLLGASEPVTAAITAVMFTGAVFSWADFVGFGLIFVMMILL 353
>gi|312193460|ref|YP_003991126.1| hypothetical protein GY4MC1_3904 [Geobacillus sp. Y4.1MC1]
gi|311217912|gb|ADP76515.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y4.1MC1]
Length = 309
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 88/288 (30%), Gaps = 5/288 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ +LW + T+ L + + R L + + + + + +
Sbjct: 12 FLLVTIILLWSYGWVLTKIGLSYMGPFTFAALRFLLASFAMILVLFFLKPTRPKGTEWII 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +L + F+ + + + S+ + ++ +
Sbjct: 72 LFIVGLLQTTAMFLLINYGMMFVNVSKSSILIYSMPIWSGILGYIFLHESLNYYKVISLV 131
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ L+ I+ + T+ + + + A++W+ K ++ +
Sbjct: 132 LGISGLVSIIWFELFTIQNKSVIFGECLLLLAAISWAGANVIVKKYFSNHNKMIVSTWQM 191
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ V G+ I + + + +SF F + + + + I
Sbjct: 192 IFGTIGVVVAAILMEWGQPIQFTPISIFILIYTGVIASSFCFTCWYVVLTKLDTTVASIS 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
PL+ I +L + + I +V I + + + K
Sbjct: 252 LLFVPLVAIFLDWLLLGEKMTINIAIGALLVTIGVYLATVVKPKERRK 299
>gi|241889105|ref|ZP_04776409.1| transporter protein [Gemella haemolysans ATCC 10379]
gi|241864354|gb|EER68732.1| transporter protein [Gemella haemolysans ATCC 10379]
Length = 297
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 93/291 (31%), Gaps = 11/291 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIV-----YFSGGLSLL 81
L + I+WG+ ++ +V L V+ R + ++ + + Y S +L
Sbjct: 8 LLLIIVTIIWGLAFIWQNIASKVLGPLTVVGIRSVIAVVFLGAVALLIPSLYRSQDPKIL 67
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + K+ + +L + F + I F+G +
Sbjct: 68 AEPITKNKSWILGGICGIVLFFAMYISQIGIGMTTAGKAGFITVLYICIVPFIGVFLGNK 127
Query: 142 RLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LN II +L ++ ++ + + + I+ F
Sbjct: 128 -LNKFFIIGLILSVIGFYFLSVKEEFALELGDIIVLISAVLFGIHIIVIDYSAARVNSMF 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L + ++ +V F F L L + + + G K
Sbjct: 187 LSIVQLVVVSILSLVLAVFKETIVFADIMSVIWPLLAIGVLSSGVGYTLQIVGQKDVPPH 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
T ++ ++ + V IL + I I IV + ++V L ++
Sbjct: 247 TASLILSLESVVAAIGGVLILGEHIGLREGIGMLIVFVGIIVSQLRDKKSN 297
>gi|238060972|ref|ZP_04605681.1| integral membrane protein [Micromonospora sp. ATCC 39149]
gi|237882783|gb|EEP71611.1| integral membrane protein [Micromonospora sp. ATCC 39149]
Length = 365
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 82/285 (28%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L A I WG T L T L + R LWS L+ +
Sbjct: 8 LLATATAPIAWGTTYLVTSEL--LPPD-----RPLWSGTLRALPAGLLLLALTRRRPHGA 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L A + + YA G + P++ L V L ER
Sbjct: 61 WWWRAAVL--GALNIGAFFPLLFYAAYRLPGGTAAVLGATQPLLVAGLAGVALGERPRPP 118
Query: 147 QIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++AA+ L + ++ L G+ A + R+
Sbjct: 119 VLVAAIAAPLGVALVVLRPDAGADLLGVAAGLTGTAAMAAGLVLTRRWGRPAGVGTLAAT 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L L G + + + + + ++ G R L+ V
Sbjct: 179 SWQLTAGGLLIAPLAVAVEGTPPPVDGPALLGYAWLGLVGTAAAYALWFRGAARLPLAQV 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ +PL L Q + + F + + A VV L T
Sbjct: 239 SVLGALSPLTAAALGWLALGQALSATQLAGFALAIAATVVGQLDT 283
>gi|221311896|ref|ZP_03593743.1| hypothetical protein Bsubs1_21176 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221321132|ref|ZP_03602426.1| hypothetical protein BsubsJ_21035 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325416|ref|ZP_03606710.1| hypothetical protein BsubsS_21186 [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 312
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 97/292 (33%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S + + + +++G +++ + E++ R L + + F +
Sbjct: 9 SSKQKSTAVIKMVISMVIFGSIGFFSEH-TNLPSFELVFVRCLCATLFLGFCWLASGQYK 67
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + V + L +W F + + Y + PV+ + LGS F
Sbjct: 68 TEKW----SKRDVLQTLACGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSFF 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--- 195
+E+LN + + + ++ L +++ +G L+ + A + G
Sbjct: 124 YREKLNVISVSSIIICFLGTALISGINGSTSLTQLMGSGIIWAVLAALFYAFTTLLGKGI 183
Query: 196 ---FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L ++ G L + + + V+ +F ++
Sbjct: 184 HNLSPYTTTFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDSLR 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ + P + IV D +T+ ++ M + L+
Sbjct: 244 FLSTKFISIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVMIFAGMALTLVRR 295
>gi|307260543|ref|ZP_07542236.1| hypothetical protein appser12_1170 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869772|gb|EFN01556.1| hypothetical protein appser12_1170 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 282
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 79/277 (28%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V IL+G + ++ ++ S ++ RV+ +L + ++ L L
Sbjct: 3 KHTLALLKVHFTAILFGASGIFGALIKS-SPDTLVLGRVMIALVCISLYFIWKKQALVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ +A + + + SF FV + L
Sbjct: 62 TRRELFSQILSGVLLAAHWITFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++A + ++ + L L V + + +
Sbjct: 120 YREGFLLVAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAVVNRKTMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSMTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTIKMLIGGAIILLSVA 276
>gi|229028260|ref|ZP_04184398.1| Transporter, EamA [Bacillus cereus AH1271]
gi|228733066|gb|EEL83910.1| Transporter, EamA [Bacillus cereus AH1271]
Length = 316
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 101/305 (33%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 LIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F +I L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSIHAILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNGTPAKQKM 309
Query: 310 KNKTK 314
+ + +
Sbjct: 310 EQEKQ 314
>gi|239828171|ref|YP_002950795.1| hypothetical protein GWCH70_2848 [Geobacillus sp. WCH70]
gi|239808464|gb|ACS25529.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
WCH70]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 96/296 (32%), Gaps = 13/296 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S +F I + + ++ + +R+ +++ + V + L
Sbjct: 2 KSSSLWKPYFALFVGVISVSTSAILVKW-AHAPASVIAFYRLFFTVLFMTPLFVKYVSEL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + S +LA H+ + +L + + P+ + G VF
Sbjct: 61 K-----MISKREWIFSIISGVLLAFHFILWFESLNYTSVTSSVVLVTLQPLFAFIGGYVF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
KERL ++ALL I+ +I++ + +A +
Sbjct: 116 FKERLTAGSFLSALLAIVGSIIISWGDFRISGKALFGDILALLACAMVTGYWLFGQELRK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
V I +L ++ F I F++ + + ++ +
Sbjct: 176 RLSLMTYTYIVYGISSLTLFLYVLAFQFPLFSYRKIDWICFILLAIVPTLLGHSLMNWSV 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
K +T+ + P+ + + F+L + I + + ++ + YL
Sbjct: 236 KWVSAATISMSILFEPVGATILAYFLLGEIIQPSQLMGGIFILTGIGTYLWGENRK 291
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 13/146 (8%), Positives = 42/146 (28%)
Query: 165 SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL 224
S + + + + ++ +
Sbjct: 3 SSSLWKPYFALFVGVISVSTSAILVKWAHAPASVIAFYRLFFTVLFMTPLFVKYVSELKM 62
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
+ + +F I G+L +F F ++ + +++ ++ PL + K+ +
Sbjct: 63 ISKREWIFSIISGVLLAFHFILWFESLNYTSVTSSVVLVTLQPLFAFIGGYVFFKERLTA 122
Query: 285 VRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + ++ ++ SGK
Sbjct: 123 GSFLSALLAIVGSIIISWGDFRISGK 148
>gi|153832199|ref|ZP_01984866.1| permease of the drug/metabolite transporter [Vibrio harveyi HY01]
gi|148871510|gb|EDL70365.1| permease of the drug/metabolite transporter [Vibrio harveyi HY01]
Length = 295
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 1/287 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ C +WG + L+ + +I RV ++ + +Y + K
Sbjct: 9 LLCLAAIWGGSFLFMRVAANTFGPAYLIEFRVAFAALALLLIALYLRKRVVFFKHIKHFF 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+L + + A T+ + + + K L +
Sbjct: 69 IIGLFNSAIPFLLFAYAAQTLNASTLAILNSTAPIWGALIGFVWYRSPLSAKAILGMMIG 128
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
I + +++ L T+ A + +Y A F A+
Sbjct: 129 IGGVAVLVGLDSSTIGGEAIFPIGASLMASFSYGIATNYTKNARQVPAFDNAHGSMWAAV 188
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+V+ + L + ++ + + ++ + + P+
Sbjct: 189 IWVLPLLPFLPMRAEPSTFEWGSVITLGVLCTGLAYLLYFHLVSEIGPTSALTVTFLVPV 248
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ IL +PI I +V+ ++ + + K
Sbjct: 249 FGILWGYLILGEPIGFNTIIGTILVLSGTMLVTGFSPAAVLAKRRAK 295
>gi|257874913|ref|ZP_05654566.1| DMT family permease [Enterococcus casseliflavus EC20]
gi|257809079|gb|EEV37899.1| DMT family permease [Enterococcus casseliflavus EC20]
Length = 292
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 89/288 (30%), Gaps = 12/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G ++ A LW ++ + Q L +S ++S R++ S G +
Sbjct: 1 MKKTVGIVYACSAAALWAVSGIAGQILFTKYGISANWLVSTRLVLS--GCLLLSIGLKDR 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + + +L+FS + + + + + + P + ++
Sbjct: 59 ARLISPFREKKDFIQLLLFSFLGMFLVQFTYFKTIEQSNASFATIIQYTGPFFVLLYAAI 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
++ + L+ +L + + L +A S ++ + +
Sbjct: 119 AKRQFPSLKTCFWLLVTLLGVTAVASKGQIEQLATSQSALGWGLASAISLAFYSIQPRKL 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + + L L+ + + IF
Sbjct: 179 LQKYGSLPIVGWGMLIGGGLGNVVHPMWKIGSQLNVQVILYLLVVILFGTALAYLIFLTS 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ + ++ PLL S+ + V + F V+ +++
Sbjct: 239 LRYLSSTLATVLTAVEPLLAAFLSIIVFHDHFTVVELVGFMAVIGSIM 286
>gi|254556302|ref|YP_003062719.1| transport protein [Lactobacillus plantarum JDM1]
gi|300769209|ref|ZP_07079097.1| transport protein [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|254045229|gb|ACT62022.1| transport protein [Lactobacillus plantarum JDM1]
gi|300493238|gb|EFK28418.1| transport protein [Lactobacillus plantarum subsp. plantarum ATCC
14917]
Length = 312
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 94/298 (31%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFA--IVYFS 75
+ ++GTL + L+G+ + Q L ++ +++ R+L + + +
Sbjct: 1 MKRLVGTLCGIISAALFGLGGILAQPLLSEQVLTPQQIVLLRLLIGGAMLLLYRNLFFKQ 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S K ++++ L F A+ + + +P I +
Sbjct: 61 ARKSTKKIWTHWRILTRIMIYGIAGLCTAQIAFFSAINYSNAAVATVFQSTSPFILLVFT 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ K + L ++ + ++ + ++ L A+ + +
Sbjct: 121 ALKAKRLPSLLAGMSLISALMGIWLIVESGFKTGLIKPEAIIFGLIAAIGVILYTKLPVP 180
Query: 196 FFIEMCVLAIPALFYVV-----WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ + I V+ LI L + ++
Sbjct: 181 LLNQIAAVDILGWALVIGGVIALIHTPLPNLVRFSKTQLLAVLIIVILATVVAYDLYLES 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K + P+ ++ + L Q + + +VV A+++ LP I +
Sbjct: 241 LKLIDGFLATMTGLFEPISSVLFGMLFLHQILVPQALVGIILVVGAIMILNLPHHITA 298
>gi|329847502|ref|ZP_08262530.1| hypothetical protein ABI_05670 [Asticcacaulis biprosthecum C19]
gi|328842565|gb|EGF92134.1| hypothetical protein ABI_05670 [Asticcacaulis biprosthecum C19]
Length = 299
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 6/286 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ Y +WG PL + +E+I HR +W++ +V+F+ +
Sbjct: 13 IVLAVLCYAVWGFAPLAYVPIAAFGGGAMEIIGHRSVWAVVW-AVGLVFFTRQFPEVWAI 71
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+K PK +G+L S+ +A++WG F++A+ +S Y++ P+I++ G++ +ERL+
Sbjct: 72 VKQPKLLGILFISSLTVAINWGVFVWAVTNGHTIESSLGYYLNPLINMAAGAILFQERLD 131
Query: 145 HLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
A ++ +LI + G P ++L +AV+++ Y RK + V + G +E L
Sbjct: 132 GYGKTAIGAAVVGVLIQAVAIGHIPWIALILAVSFATYGIIRKQVRVNALPGLLVECLYL 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ Y+VW SG HFF F + + +R LST+G ++
Sbjct: 192 FPVGIAYLVWFEASGQGHFFDSPWNAFWFAFTGPITVLPLALFSFVA-RRLPLSTMGFIQ 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ AP + + +R + F + +V+
Sbjct: 251 FIAPTIAFCIG-LSQGETFTFLRGVSFAFIWGGAMVFAFGAWQRLR 295
>gi|303246549|ref|ZP_07332828.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
gi|302492259|gb|EFL52134.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
Length = 312
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/299 (11%), Positives = 83/299 (27%), Gaps = 10/299 (3%)
Query: 26 GTLFVFCAYIL-WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + WG++ ++T+ L + ++ R + + L
Sbjct: 7 GVAAALAVTLFAWGLSYVWTKVALTAMGPFTLVCLRFTLATALFGLLFLVTGRRPQRLGR 66
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL---- 139
+ L+ A +Y + + + ++V LG
Sbjct: 67 ADRWRMFFLALLQPVGHFAFETCGLVYTTASAAALIVAAIPLAVLALAVCLGRQRAGTGD 126
Query: 140 --KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ + +L L + AV +A V + +
Sbjct: 127 VARIVVSAGGVALIILGGGQGGQPAGGELAGNLLMVGAVVSTAGYVVLGGALVRRLDAWT 186
Query: 198 IEMCVLAIPALFYV--VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ LA A +V + + L + F ++Y + R
Sbjct: 187 VTFAQLACGAALFVPGCVWEIAARGWPAPDSRQLAALAALTVLASLAAFLCYNYVLSRLS 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + P++ V + L + + + + VV+++ V + +
Sbjct: 247 PARSALWLNAVPVVTAVGAWASLGERLGWWQLVGGAAVVMSVAVPGWHRPRRLPQRPGR 305
>gi|254487231|ref|ZP_05100436.1| integral membrane protein, putative [Roseobacter sp. GAI101]
gi|214044100|gb|EEB84738.1| integral membrane protein, putative [Roseobacter sp. GAI101]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 94/291 (32%), Gaps = 8/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G ++ +L+ + + + E R + L + AI
Sbjct: 7 HRPVIGIFWMVVTGLLFICVTALVKHMGPRLPSAEAALIRYSFGLVFLLPAI-------G 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ + + + A+ + YA+ + ++ P+ ++FL
Sbjct: 60 SLRSAHLTRRQWTLFSIRGGLHALGVILWFYAMTRISIAEVTAMNYMAPIYVTIGAALFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L +IIA +L +L +I+ L + A+ +A F +
Sbjct: 120 GETLALRRIIAVILGLLGAVIILRPGFRELSNGHFAMLIAAVVFGGAYLLAKVLTDEVKP 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V+A+ ++F ++ + + L + + A L+
Sbjct: 180 AVVVAMMSIFVSLFLLPFALPVWITPTWEEIGILAAVACFATAGHYTMTLAFAAAPLTVT 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + + + +PID I +++ ++ + + +
Sbjct: 240 QPVTFLQLVWATILGAVVFVEPIDIWVVIGGTVILGSVTFITWREAMLNRQ 290
>gi|171059264|ref|YP_001791613.1| hypothetical protein Lcho_2583 [Leptothrix cholodnii SP-6]
gi|170776709|gb|ACB34848.1| protein of unknown function DUF6 transmembrane [Leptothrix
cholodnii SP-6]
Length = 310
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 10/298 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G + CA I + ++ ++ VL +I R + + ++
Sbjct: 1 MQSRPLLGVALIVCATICFATMDNAVRYAGRIMPVLVIIWLRYMTQTVVMAGWLL--REV 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + +L F +A+ + +TPV+ L +
Sbjct: 59 LHDGRRNAFRTAHPKFQSVRGALLLASSAFGFFAVQYMPVAEFTAINMLTPVLVTLLAAW 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ER++ L+ + L LI+ + A +A +
Sbjct: 119 LLRERVSRLRWLLVLGAFTGALIVMRPGSGLFGWAVLLPLGGAVTYASFQVLTSKLAALE 178
Query: 198 IEMCVLAIPAL-------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
L V+ + + LI GLL + +
Sbjct: 179 SPTTTHFYTGLVGTLLLAPVVLASPIDIDAQLLAASGTTWALLIAIGLLGTVGHLLLILA 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ A S + Y + + + D I G++ + V +
Sbjct: 239 LGCAPASRLVPFLYAQLGMAALIGWLLFGDLPDAWGWIGMGVIALCGATTAWLNVRAA 296
>gi|170759852|ref|YP_001786282.1| drug/metabolite exporter family protein [Clostridium botulinum A3
str. Loch Maree]
gi|169406841|gb|ACA55252.1| transporter, Drug/Metabolite Exporter family [Clostridium botulinum
A3 str. Loch Maree]
Length = 294
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 94/296 (31%), Gaps = 10/296 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T+ L +F + ++ + L +R+ ++ + +++ L
Sbjct: 2 KSTITSYLALFFGVFALSTSAIFVK-LANAPSSITAFYRLFFAALILLPFLLFNKSNLRE 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L K +L S LA+H+ + +L ++ + P+ S+ G + K
Sbjct: 61 LLSLSKKQWKFILL--SGLFLAIHYILWFESLNYTSVASSTVIVTLQPIFSMAGGYILFK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGSS 193
ER + II + I+ I+ IA F +
Sbjct: 119 ERFSKKAIIGCFIAIMGCFIIGWRDFQISNQALFGDLLAFIAAGIITAYFFIGQYVRKNL 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
M A A F ++ + F+ + IF++ +K
Sbjct: 179 SLVSYSMIGYASSAFFLGIYAYSRQVSFTYYPLQTWWSFVGLAFIATILGQTIFNWLLKW 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
S + + + + + FIL + I + I +++ + ++LL
Sbjct: 239 LSASVISMSILGETIGTCILAYFILDEVISLQQGIGMAFILVGLALFLLQQKQTGK 294
>gi|16272186|ref|NP_438395.1| hypothetical protein HI0223 [Haemophilus influenzae Rd KW20]
gi|3915923|sp|P44579|Y223_HAEIN RecName: Full=Uncharacterized transporter HI_0223
gi|3212187|gb|AAC21892.1| rarD protein, putative [Haemophilus influenzae Rd KW20]
Length = 300
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/292 (19%), Positives = 118/292 (40%), Gaps = 5/292 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 10 QGILLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSLI 69
Query: 85 L----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + F++A L +G + YF+ P+I LG +LK
Sbjct: 70 TTTLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWLK 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ERL+ +Q IA LL + H+ ++ V + + I +
Sbjct: 130 ERLSFIQKIALLLAAAGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGITL 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I ++ S L L G++++ ++ +S
Sbjct: 189 DIILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIFA 248
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 249 VLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKKKVR 300
>gi|15615310|ref|NP_243613.1| hypothetical protein BH2747 [Bacillus halodurans C-125]
gi|10175368|dbj|BAB06466.1| BH2747 [Bacillus halodurans C-125]
Length = 302
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/302 (10%), Positives = 98/302 (32%), Gaps = 15/302 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ E + ++ + A ++ ++ + + +R+ ++ + +
Sbjct: 1 MNNEQTNPSIIVPLVLSIIAI---SFAAIFVKW-SEAPATILSMYRMYFACFLLVPIVWG 56
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + + LA+H+ + +L ++ + P++++
Sbjct: 57 KRDEFKRL-----TKNDWLLFFGAGLFLALHFALWFGSLKLTTVASSTIILALQPIVALS 111
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA------YCFARKT 187
LG +F KER + ++ + +L +++ I S C+
Sbjct: 112 LGFIFFKERASRHILVTMAVAVLGAIMVGWGDIGLSQQAIIGDLLSFLSVIAVVCYLIIG 171
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
V +I + A + F ++ + + ++ + I
Sbjct: 172 QSVVKKVSHWIYSFSVFAFAALLLTIYNLITSVPFTGYDLQEWGIFLLLAIVPTIAHVIH 231
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + +T+ + P+ ++ L + ++ + I V+ + +LL
Sbjct: 232 NWLLNYVNATTISMSILGEPVGATALAIVFLGESLNVWQVIGSLFVLSGVFFFLLQQQHR 291
Query: 308 SG 309
Sbjct: 292 LK 293
>gi|315646196|ref|ZP_07899316.1| putative permease [Paenibacillus vortex V453]
gi|315278395|gb|EFU41711.1| putative permease [Paenibacillus vortex V453]
Length = 303
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 98/296 (33%), Gaps = 11/296 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G V + WGI Q L Q + + +++ R+ + + +
Sbjct: 6 RRTGLGLVIIGALCWGIGGTVAQKLMQQYAIDLNWLVTTRLCLAGILLLSIQFFVKDRSQ 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K A+ ++VF + ++ ++ + + ++ PV+ + ++
Sbjct: 66 IWKIWKNGKTAMQLMVFGLLGMLTVQYTYLASIKHGNSAVATLLQYLAPVMIIVYLAIRE 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIPVG 191
++ L+ +I ALL +L ++ + ++ ++ A+ +
Sbjct: 126 RKLLSRQDMITALLALLGCFLLLSNGSVTQLSVPTPAIVWGVLSGIALAFYTIYAVPLLE 185
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I + I ++ L + + F + +
Sbjct: 186 QYDSLVIVGWAMLIGGSALAWFHPPWKINLAGLQSEAYLYLVFVIVFGTMIAFWFYIESL 245
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ PL ++++VF LK+P + ++ +++ L N
Sbjct: 246 QSLSPKETSLLGTLEPLAAVLTTVFWLKEPFGVFQWAGTACIIGMILLLALYQRTN 301
>gi|255693598|ref|ZP_05417273.1| integral membrane protein [Bacteroides finegoldii DSM 17565]
gi|260620664|gb|EEX43535.1| integral membrane protein [Bacteroides finegoldii DSM 17565]
gi|295085803|emb|CBK67326.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Bacteroides xylanisolvens XB1A]
Length = 291
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 94/284 (33%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R L + G++
Sbjct: 10 LIAILVVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVI-------SPKRLFAG 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q +F P+++ L + E+
Sbjct: 63 NWKDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKAT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I ++L ++ + ++ + L + + + + T +
Sbjct: 123 KGLIYGSILALIGVGLVVFNGSFVLKLSPVGDLLTLLAALSWAFYSLVIKKMTGRYPTVF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + L + + L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFLLHPLQPDFDVLLKPVVLSNLLFLAVLASLVCYVLWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y PL+ +V+SV IL + I + + G ++ +
Sbjct: 243 GTVRASNYIYLNPLVTMVASVIILHEQITWITLLGAGCIIFGVY 286
>gi|169335191|ref|ZP_02862384.1| hypothetical protein ANASTE_01599 [Anaerofustis stercorihominis DSM
17244]
gi|169257929|gb|EDS71895.1| hypothetical protein ANASTE_01599 [Anaerofustis stercorihominis DSM
17244]
Length = 305
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 99/290 (34%), Gaps = 16/290 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N ++ F+ +WG + T+ L+ +S ++I R + + +F
Sbjct: 4 NIKNKSLCADFFLLVMAFIWGSGFIVTKNGLDALSGTQLIFTRFIIAAVTLFII------ 57
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ K L K + +L + + F Y L+ ++F V I F+
Sbjct: 58 --NFKKLNLITKKTIMKSAVIGFVLFLGFTFQTYGLVQTSAGKSAFLTAVYVAIVPFITM 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIP 189
K++ IAAL++I+ + ++T++ L ++ W+ + F
Sbjct: 116 FVGKQKPEKHNFIAALMMIIGIFLLTMNPREGLNINYYDGITLIGSIFWAFHVFFVGIFS 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
M + +++ F + + L + ++ F I +
Sbjct: 176 KDEDPIILCMMQMAFAGLFAFILLIFNGELFTFDITGSIVPMLLYLGVIASAIAFLIQNV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
K + GI+ + + + LK+ I+ A+++
Sbjct: 236 AQKYTTPTHAGILMSMESVFGTILGIIFLKEIFTIQMLFGAVIIFTALIL 285
>gi|261363916|ref|ZP_05976799.1| integral membrane protein [Neisseria mucosa ATCC 25996]
gi|288567922|gb|EFC89482.1| integral membrane protein [Neisseria mucosa ATCC 25996]
Length = 287
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/283 (9%), Positives = 79/283 (27%), Gaps = 3/283 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+WG + + ++ ++ ++ R+L + V + G + +
Sbjct: 1 MFYQVLALIIWGSSFIAAKYSYEMLDAALMVEARLLIAALMVLPSCYRHFGKIPRREWKP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A V + + + A L +
Sbjct: 61 LLWIAFINYVVVLLLQFIGLKYTSAASAITMVGLEPLLVVFVGHFFFNDKARIYHWICGA 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI--AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +++L L + + ++ + + F +
Sbjct: 121 AAFVGIGMMVLGGAEEGGAVDWFGCLLILLAGIGFAGVMRPSREMIARIGAPAFTSASMA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A L + L + + +++ G+ + + G++
Sbjct: 181 AAAVLCLPFSLVLAESYEVRWSWGGVLSVLYLGVGCSWLAYLLWNKGMNKVPANVSGLLI 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P++ ++ +V IL + + V IV+ + V +
Sbjct: 241 SLEPVIGVIMAVLILGEHLSAVSASGVFIVIASTFVVGWLSNR 283
>gi|218895529|ref|YP_002443940.1| transporter, EamA family [Bacillus cereus G9842]
gi|218543692|gb|ACK96086.1| transporter, EamA family [Bacillus cereus G9842]
Length = 316
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 98/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFLLSGVMLLFFFKVLGKN 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 FLKER-LNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
K+ LN ++I + +++ ++ H GI L L A +Y
Sbjct: 129 VYKDDALNMRKLIGVSIGFCGVILVNMPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
>gi|170724481|ref|YP_001758507.1| hypothetical protein Swoo_0111 [Shewanella woodyi ATCC 51908]
gi|169809828|gb|ACA84412.1| protein of unknown function DUF6 transmembrane [Shewanella woodyi
ATCC 51908]
Length = 323
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 110/303 (36%), Gaps = 20/303 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++G +WG+T + ++ L V + ++ R + ++ G+ + S
Sbjct: 4 TNKDNLLGWTAAIAVAGIWGVTGVVSKPLSMAVDPMTLVFFRYVTAVIGLSVIFMITSRF 63
Query: 78 LSLLKDTLKNPKAVGMLV-----FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
SL KD + K + V F +L + P +V
Sbjct: 64 TSLSKDLGSSLKIDKGDIAKIALCGIIGQGVFSLFNFLSLSHIGATENGVIQGMQPFATV 123
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSA 180
F G +F+ +++ +Q A + + + M++ + + +++ W+A
Sbjct: 124 FFGMMFMNFKMSKIQWGAFIASAVCIYAMSVGPTNQVENGSSVMGYVYVTCSMLSLAWTA 183
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF--SGGEHFFLGNIPDTLFLIGYGL 238
+ A GS + +A+ + VV S + L +
Sbjct: 184 HLRASLAEKYGSVVSMLYQYISVAVMGIIVVVAMDLDLSQINIILANPLLLGLLIFLGMG 243
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ + I Y K+ + + PL+ + +V L + + +TI+ ++V+A+
Sbjct: 244 ISGGSYLIQLYSFKKIGVEKATMALNLMPLVGYIVAVLTLGEQLHLSKTIIVSLIVVALY 303
Query: 299 VYL 301
V+
Sbjct: 304 VFT 306
>gi|126699016|ref|YP_001087913.1| hypothetical protein CD1413 [Clostridium difficile 630]
gi|115250453|emb|CAJ68276.1| putative membrane protein [Clostridium difficile]
Length = 314
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/308 (11%), Positives = 100/308 (32%), Gaps = 18/308 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F+ A +LW L+ +FL ++ +V R+ + + + +
Sbjct: 3 EKSKGYVFIAIAGLLWATLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQIL 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ A+ + A+ + + + +P+ +
Sbjct: 63 KI----NKKGIIYSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKICY 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE + ++ + +L + ++ LL ++ A +
Sbjct: 119 KENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGVLSAIAYALMPTISKNALK 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I + A+F + + ++ + L+ + + + ++ GI
Sbjct: 179 EFSSSTILVYSFLFGAIFMIPSSRPWEILNYAKDLDVLSCMLMLGIVPAALAYIFYAAGI 238
Query: 252 KR-AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV---YLLPTVIN 307
+ +LS G++ + ++ IL + + +++I+ VV +
Sbjct: 239 SKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRI 298
Query: 308 SGKNKTKK 315
K+ K
Sbjct: 299 FYKSNKLK 306
>gi|323488002|ref|ZP_08093257.1| hypothetical protein GPDM_01620 [Planococcus donghaensis MPA1U2]
gi|323398354|gb|EGA91145.1| hypothetical protein GPDM_01620 [Planococcus donghaensis MPA1U2]
Length = 300
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 93/298 (31%), Gaps = 12/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P + + + ++ ++ + + +R+L+S+ + +
Sbjct: 1 MEKPAIHPYIPIIIGVFSVALSAIFVK-MTVADSGVTAFYRMLFSVLIMSPVFLLKYTH- 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + LA H+ + +L ++ + P+ + F
Sbjct: 59 ---EIKKLSKRDWLFASIAGVFLAFHFILWFESLNYTSVASSTVLVTLQPLFAFAGTYFF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
KE+L+ +++ + IL +++ L IA
Sbjct: 116 FKEKLSIKTLVSGAIAILGSVLIGYGDFQVSGSALYGDLLALIACALITAYLLFGQDVRK 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
V +I + + G FL+ + N +F++ +
Sbjct: 176 RLSLVTYTYVVYSISTITLFFYIVLKGESFGPYPASEWMWFLLLAIIPNLLGHTLFNWAL 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
K + + I P+ + + FIL + + + + +V+ +++++
Sbjct: 236 KWVSTNVISIAILFEPIGAAILAYFILGEYLTVSQIVGGSVVLAGIMLFVTDYRKIKK 293
>gi|300312849|ref|YP_003776941.1| drug/metabolite transporter (DMT) superfamily permease
[Herbaspirillum seropedicae SmR1]
gi|300075634|gb|ADJ65033.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Herbaspirillum seropedicae SmR1]
Length = 304
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 86/298 (28%), Gaps = 16/298 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY 73
+ G L + + + + + V + VI+ R+++S P ++
Sbjct: 7 HPTPRQAFLGGLLLAIVGAVFFSAKAIVAKLMYRYHVDAVMVITLRMVFSFPMFAAVALW 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ L ++V + L L F+TP +
Sbjct: 67 KARTQPPL----GRGDGWRIVVLGLMGYYLSSFLDFLGLQYISAGLERLILFLTPSFVML 122
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ F K + ++ A L+ +++ H S I + A S
Sbjct: 123 IAFFFFKRKFGWIEWAALLVSYFGTVLVLQHDLHVGGSDVILGSALVLGSAFSYSIYLIS 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF--------- 244
G + + + + + FF+ P L + +F
Sbjct: 183 SGELVRRVGAVRLVAYAMCVSSVACVIQFFVLRAPADLLTQVAPVYQLSLFNAVFCTVLP 242
Query: 245 -CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + R T P+ + +L +PI ++ + +V+ M +
Sbjct: 243 VFLTMVAVARIGAPTAAQAGLVGPVSTLFMGAVLLDEPITALQLVGTALVLAGMWLLS 300
>gi|282857235|ref|ZP_06266478.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282584933|gb|EFB90258.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 311
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/314 (12%), Positives = 101/314 (32%), Gaps = 19/314 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+++ N+++ + V +WG + + L ++ LE++ R ++ +
Sbjct: 1 MNENNSTVRRYLPMTLVLL---IWGFMNVPATYALREMPPLELLLLRTAIAVVILAPLA- 56
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ ++ + + ++ F YA+ + + +P+I+
Sbjct: 57 ----YGRERRLLPDRGDLTIAVLMGISGVLINNLCFFYAIKFTSLTNIAIIFATSPLITT 112
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL----------SLAIAVTWSAYC 182
L +VFL ERL + +L + + + + LL A +
Sbjct: 113 ILAAVFLGERLTLRRACGIILALSGAVCLLCKGDLSLLANLSLNKGDLMEFCASFCCSVM 172
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
SS + A L + + L L L +
Sbjct: 173 TVLGKKITKSSPIVVTLCNMAASCVLTAALIAVVGQPMNLALSGRALAGTLYIGILGSGC 232
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + I+R G +P++ I +++ +++ + ++ ++ + +
Sbjct: 233 AYVLQQTSIQRIGAGATGAFLNGSPVVSIFAAMVFMEESLSMIQAACAAVIFAGIFLNAG 292
Query: 303 PTVINSGKNKTKKS 316
+ + KS
Sbjct: 293 GERRSGSVDSQTKS 306
>gi|290961974|ref|YP_003493156.1| hypothetical protein SCAB_76471 [Streptomyces scabiei 87.22]
gi|260651500|emb|CBG74622.1| putative integral membrane protein (fragment) [Streptomyces scabiei
87.22]
Length = 309
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 73/272 (26%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + + +V R+L+ + A+ L T +
Sbjct: 31 SLVWGFSFLLIKVGTQAYAPFQVTFGRLLFGTLVLAVAMAVKRERLPSGARTWGHLAVAA 90
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L+ + + + + + V L + L
Sbjct: 91 LLLNALPFSLFAYAELTIPSTLAGICNATSPLWGMALSLVALSEDRPTRVRVAGLGLGFL 150
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L SG+ +A+ S + G + L +
Sbjct: 151 GVLTVLGAWQGFSGLDARGTMMALLASLSYPVGWIYVRRTLAGSSTSHLSLTGAQLLLAT 210
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+P + L + + +T ++ Y P
Sbjct: 211 AQLACVTPLFTTLPSSFPVLPLLAVVALGVLGTGVAMLLQYGLVSEVGPTTAQMVTYFIP 270
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + V +L + + + IV+ +
Sbjct: 271 VIATAAGVVLLGESLAWSTPVGAVIVLAGAAL 302
>gi|237752420|ref|ZP_04582900.1| integral membrane protein [Helicobacter winghamensis ATCC BAA-430]
gi|229375909|gb|EEO26000.1| integral membrane protein [Helicobacter winghamensis ATCC BAA-430]
Length = 300
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 77/290 (26%), Gaps = 8/290 (2%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A WG + ++ + S V R +L +V L + K
Sbjct: 9 ILLVIAMFFWGSSWPSSKVLVTYTSADVVTFWRFFLALLASIPLVVMLKIPLRIDGKAFK 68
Query: 87 NP-------KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ F + F+ ++ + + SV
Sbjct: 69 YLLAAAVFNCLYSLMFFVGLNYGSAGKGGVLVTTITPVFVYLLTFGLYKIQKGVNKSVKG 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L I A + +L L + + + A
Sbjct: 129 NEILGVFLGIVAGICLLDLGNLQTLFSKFNVFFVLCALDWAVLTLVCQRIRIHPIAINFY 188
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + ++ + E F + LI L + I+ GI +
Sbjct: 189 ITLFSVVLFSPIFLIQPQMLEIFNFDLRFWCMLLIIAVLSTAIGTSIYYMGIAQVGAEKA 248
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ +++S FIL + + I I + A + L
Sbjct: 249 SSYPLLVPVFALLTSYFILGEIPSVLTLIGGAIAIFATYLINLYKPRVKK 298
>gi|91784349|ref|YP_559555.1| DMT family permease [Burkholderia xenovorans LB400]
gi|91688303|gb|ABE31503.1| Putative 10 TMS drug/metabolite exporter, DME family, DMT super
family [Burkholderia xenovorans LB400]
Length = 309
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 3/283 (1%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + Y++WG T L L L + R L++ G+F + +
Sbjct: 26 VLALAVVYLVWGSTYLAVHVALGSFPPLLLSGLRNLFAGVGLFVFAARRNPVWPGAAEIR 85
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
MLV ++ + + + + + VI+ G +
Sbjct: 86 NAGLVGTMLVGLSSGMLAYGMRTVG--TGTAAVMVATVPLFATVIAAVAGRKIGRGEWFA 143
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + A + ILS S L++ + A S+ F + +
Sbjct: 144 VGLGLAGIAILSHGDSAPGSAGGSLAILCGALFWAGGAHLAGRLKLPSDLFLSTSLQIGL 203
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ SG L +P F+ + + + + I+ Y
Sbjct: 204 GGAMSTLVAWVSGERMLELHWLPLLAFIYLMLIGTMAAYVAYGFLIRHTSPIIASSCMYV 263
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P++ + +L +P+ + +++ ++ +
Sbjct: 264 NPVVAVALGALLLGEPVTRSTVVATIVILASVGLSFWFDYRKK 306
>gi|157163141|ref|YP_001460459.1| carboxylate/amino acid/amine transporter [Escherichia coli HS]
gi|331655314|ref|ZP_08356313.1| putative permease transporter [Escherichia coli M718]
gi|157068821|gb|ABV08076.1| carboxylate/amino acid/amine transporter [Escherichia coli HS]
gi|331047329|gb|EGI19407.1| putative permease transporter [Escherichia coli M718]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLSVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLIVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|119774543|ref|YP_927283.1| hypothetical protein Sama_1406 [Shewanella amazonensis SB2B]
gi|119767043|gb|ABL99613.1| protein of unknown function DUF6, transmembrane [Shewanella
amazonensis SB2B]
Length = 312
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/285 (7%), Positives = 68/285 (23%), Gaps = 6/285 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + +E + R + + I + + ++
Sbjct: 26 IWGFGFVAQRLGMESLEPFAFNGLRFVIGAMSLLPLIWFLKTKGRVKGAGETGFWRRALV 85
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS-VFLGSVFLKERLNHLQIIAALL 153
+ + + + I V + + LK + +
Sbjct: 86 GSLGCGGILFIAASFQQVGLLHTTAANAGFITGLYIVLVPVLGIMLKHSTGLNTWLGCAI 145
Query: 154 IILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
++ L +++ + + + A + + AL
Sbjct: 146 AVVGLYFLSVGEDFSISFGDGLQLVGALFWAMHILAVDHYATRIAPVVLACGQFLVCALA 205
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
V + + + + K A + I+ +
Sbjct: 206 SFVVSLMMETTTLAGVQAAWGSLAYAGLISVGVAYTLQVLAQKHAHPAHAAIILSLETVF 265
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + L + + G+++ M++ +P K
Sbjct: 266 AAIGGMLFLDETLGPRALFGCGLMLFGMLISQIPLRYLVKSRHQK 310
>gi|327481948|gb|AEA85258.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/303 (9%), Positives = 76/303 (25%), Gaps = 21/303 (6%)
Query: 21 LPTMMGTLFV--FCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G F A + W L + + L + R + + + +
Sbjct: 1 MSARQGPAFAGLLIAVLCWSGNALVGRAFHDSIPPLSLSFWRWVLATSLLLPFVA----K 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ V +A +A + A + + + P+ +
Sbjct: 57 GIWTHRATLRAAGWRLPVLAAMGIASYNSLLYTAAQSTEAINLTLVNTCLPLATFIGAGF 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS--------------LAIAVTWSAYCF 183
L E + LL + + + ++
Sbjct: 117 LLGEWPLRRAWFGMAVAAGGLLYLISRGSWQTFASLSFQRGDLIMLLAVLAWALYTLLLR 176
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + +L +P + F L +
Sbjct: 177 RWARHLLVPPLVLLGVLMLLGLPLILPFYLLELGRVGGFALTPSNLAAIGYTAVFASLVA 236
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +++G+K ++ Y P+ + +L + + T I ++ +++ P
Sbjct: 237 YVGWNHGVKIVGAGRAAMVMYLMPVFTALLGWVLLGEALRTFHWIGGALIFAGLLLATRP 296
Query: 304 TVI 306
+
Sbjct: 297 SFR 299
>gi|260584306|ref|ZP_05852053.1| membrane protein [Granulicatella elegans ATCC 700633]
gi|260157824|gb|EEW92893.1| membrane protein [Granulicatella elegans ATCC 700633]
Length = 351
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 81/287 (28%), Gaps = 6/287 (2%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ F A + + I +++ LE V + + L + GV ++ K
Sbjct: 10 IILAFLAAVFYAINTPFSKILLENVPPTFLAAFLYLGAGVGVGMMYLF--HIKKEDKSER 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + V + V F + + S V + + + KE+++
Sbjct: 68 LTKQDLPYTVGMILLDIVAPIFLMIGIKMGTASNASLLGNFEIVATTLIALLIFKEKVSG 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
IA I LS ++++ ++ + + + +
Sbjct: 128 KLWIAIGFITLSSIVLSFEGIGSFQFSIGSLFVILATCCWGLENNCTRKISEKSTYQIVL 187
Query: 206 PALFYVVWNGFSGGEH---FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ F + ++ + ++ + +
Sbjct: 188 LKGIFSGGGAFVIAVLLGEKIPEMKYIVMIMLLGYVSYGLSIFLYIRAQRNLGAAKTSAY 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
AP + + + + + + ++ I V + T+I +
Sbjct: 248 YAVAPFVGSFLAFAVNGEKLAVEYFVGLALMFIGTVFVVYDTMIKNH 294
>gi|30248398|ref|NP_840468.1| integral membrane protein, DUF6 [Nitrosomonas europaea ATCC 19718]
gi|30138284|emb|CAD84292.1| Integral membrane protein, DUF6 [Nitrosomonas europaea ATCC 19718]
Length = 314
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 94/298 (31%), Gaps = 15/298 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+S +G LF + I + ++ + ++E V + +++ R+++S+P FA++
Sbjct: 20 SSHQQALGVLFALLSAIGFSAKAIFIKLAYVEPVDAVTLLALRMVFSVPFFVFAML---- 75
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + +L+ + L L F+ P + V + +
Sbjct: 76 HGRAQATPMARHDWLAVLLLGLVGYYLASFLDFLGLQYISAGLERMILFLYPTMVVLISA 135
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKT 187
+ + + A LL + + ++ +H A A+ ++ Y
Sbjct: 136 LVFRAAIGRRVWFALLLSYVGIGLVFVHDFHITSDGLFMGSSLVFASALAYAIYLIGAGH 195
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
F + + + L +
Sbjct: 196 TIARIGSMRFTAYAMTVACLACIAQFLLTHPLDDLQQSTRVYGLSIGMALFSTVMPAFAL 255
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++R ++ P+ I + L + + + G+V+I +++ + +
Sbjct: 256 AAAMRRIGSMQTSMIGALGPVATIYLAYVFLAEQLSLTQLAGSGLVLIGVMMISMRKM 313
>gi|320162290|ref|YP_004175515.1| hypothetical protein ANT_28890 [Anaerolinea thermophila UNI-1]
gi|319996144|dbj|BAJ64915.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1]
Length = 305
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 81/285 (28%), Gaps = 7/285 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T+ L +WG + L+ + + ++ +++ RV+ + + I L L
Sbjct: 2 TLKNWLIFLALGTIWGSSFLWIKVGVGEIGPFMLVTLRVVVAFTALALVIARKRTILPDL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ T +G+ + + + + + F + F+ +
Sbjct: 62 RRTWWIFAVLGLFNLAVPFVLISTAEQSLSSGLAAILNATVPLFTLVIAPFFISEERMTL 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEG 195
++ +++ + L ++ A + G
Sbjct: 122 PRLGGLLVGFAGVVVLMSDELRAGANWGDLKGQALMLLATFSYGAASVFARLKTRGMPVE 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L + F I L L ++ Y +
Sbjct: 182 VQAGGQALFASLAMLAILPFAENPLVFPRLPITWLAVLWLGVLGTCLATLMYYYLLHEVG 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ ++ Y PL+ +V L++ + + +++ +V+
Sbjct: 242 PTRATLVTYLFPLVGVVLGAVFLRERLQVWHLLGGAMILSGIVLV 286
>gi|315652270|ref|ZP_07905262.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485393|gb|EFU75783.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 289
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 90/279 (32%), Gaps = 3/279 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G +++ + +G+ P + + + ++ R L S ++ G+ L
Sbjct: 6 RVRGEVYLLLSGFFFGLQPFLAKIIYAHGGNAYGLLFLRFLISGTVFAVISMFLGTGMRL 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L + + + IL +I + L + + + I +F +
Sbjct: 66 KRQELISILILSVPETVMCILLFLSYSYISSGLASTLHFSYPAAVILLEILIFRKKISKI 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L L + + + G+ + V ++ Y +
Sbjct: 126 KLLCLLFCASGIAVFYHPDGNINIFGMVIALA-SGVGYAIYIIILTHGKSSRIPVVKMSA 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + A + G F + + ++++ C F G +
Sbjct: 185 WLSLLVATEIAIVMLVLGKFRFDMDGTAWGTGIFMAAVVSTSALCAFQVGAPMCGAQSAA 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P+ I+ V L + ++ I +++ ++V+
Sbjct: 245 LLSTIEPVSSILLGVIFLGESMNIRIFIGICLILFSIVI 283
>gi|301056002|ref|YP_003794213.1| drug/metabolite exporter family transporter [Bacillus anthracis CI]
gi|300378171|gb|ADK07075.1| transporter, drug/metabolite exporter, EamA family [Bacillus cereus
biovar anthracis str. CI]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 96/293 (32%), Gaps = 12/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + GL + K+ +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKGLYIEKNEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KGVLLI-----GVIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTV 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G F
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFFITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ +++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLVWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ P + +V IL++ + +++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTSIQIIGAVFIVCGVYTATFGYGKKSKGQK 292
>gi|291288820|ref|YP_003505636.1| hypothetical protein Dacet_2930 [Denitrovibrio acetiphilus DSM
12809]
gi|290885980|gb|ADD69680.1| protein of unknown function DUF6 transmembrane [Denitrovibrio
acetiphilus DSM 12809]
Length = 287
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 85/288 (29%), Gaps = 18/288 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
MG F A + W + +FL + V + + R W++ + + L
Sbjct: 1 MGYFFALMATLFWSGNAVAARFLAETVPPISISFWR--WAVALLICFPATYPAFRRNLPA 58
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ K + +L F L + +Y + + + S+F ERL
Sbjct: 59 VKEHWKYLTLLAFLGVALFNN---LLYTAAQTTTAFNISVISTITPVVILIFSLFAGERL 115
Query: 144 NHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ + + ++ ++ + + G ++ A A+ RK
Sbjct: 116 SRVNMTGFIIAVVGIAFLITDGNPLRIFQLRLVKGDIIMLGASAIFAGYTVLIRKKPVEI 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ L G F+ + F ++ +
Sbjct: 176 TINTMVFFTFHAGFLMLLPFYLFSEFFIAPTPFGGKQVLGFVYIGLFASFVSFMCWTRAV 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G + Y+ P+ + IL + I + +V + +
Sbjct: 236 TMIGAARSGAVYYSIPVFAGLLGYLILGEEIGLSDMLSMCLVGFGVYL 283
>gi|229113675|ref|ZP_04243120.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock1-15]
gi|228669776|gb|EEL25174.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock1-15]
Length = 310
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 103/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMIFSFKELQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ ++FLKE +
Sbjct: 64 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEEIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALIEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 244 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGV 288
Score = 40.3 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMIFSFKELQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S LK+
Sbjct: 61 VVHKKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEE 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGAIGVLFITIPS 143
>gi|225351356|ref|ZP_03742379.1| hypothetical protein BIFPSEUDO_02950 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157700|gb|EEG70983.1| hypothetical protein BIFPSEUDO_02950 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 331
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/326 (8%), Positives = 90/326 (27%), Gaps = 30/326 (9%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A ++WG + Q ++ + L + R + + +
Sbjct: 1 MQRKEIGGMACLVLAALIWGFAFVSQVQGMDSTTPLFFGATRFTLGSISLIPLLWFRRST 60
Query: 78 LSLLKDTLKNPKAVGML----------------------VFSATILAVHWGFFIYALLTR 115
++ + + + + + + L +
Sbjct: 61 IAEQERKRRETQGKPSITLGNGAIVAMPKWAGNPIVVSIICGIVLFTASTVQQYGILYSG 120
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-----L 170
+ F + V++ L V L+ R++ II+ + ++ ++ + G +
Sbjct: 121 SAGRSGFITALYIVMTPLLAFVILRRRVHLSVIISVAISVIGFYLLCVTDGFGSITLADM 180
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
L A + + + A+ + + G +
Sbjct: 181 VLLFTAVLFAGHILVIDTFGRDMDPILLSFGQITTTAIISWIGSIIEGSIDWAGAAQSWI 240
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + + G + + ++ V +L + + T +
Sbjct: 241 AIVYAGVCSAGVAYTLQVIGQQLVPPTRASVIMSLESFFSAVGGALLLGEIMTTRAYLGC 300
Query: 291 GIVVIAMVVYLL--PTVINSGKNKTK 314
++ ++ L ++++ K K
Sbjct: 301 ALIFAGTILAQLPIDQLLHAAKRKPA 326
>gi|159904607|ref|YP_001548269.1| hypothetical protein MmarC6_0216 [Methanococcus maripaludis C6]
gi|159886100|gb|ABX01037.1| protein of unknown function DUF6 transmembrane [Methanococcus
maripaludis C6]
Length = 296
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 93/292 (31%), Gaps = 21/292 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L +F I WGI+ + T+ L + + + R + + +
Sbjct: 2 NDRSLGILLMFLTVIFWGISFVATKIILVYIPPITIGFIRFAIASMILIVLV-------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + +++ + ++ F AL + P+ + + V
Sbjct: 54 RNFSSYSKKDFLNLVLAGFLGITSYFLFENVALEYTTATNAALIAATVPIFYLMVSDVVE 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--- 196
K + ++ +L+ + + I+ L+ L + + +
Sbjct: 114 KRISSKIKYFGSLIGLFGVSILILNGKFILELNPLGDLLMLGAVFTWVLYTFVIQKLEKH 173
Query: 197 ---------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ +L +P + + FL L ++ + +
Sbjct: 174 DNLKVTRDITLIGALLFVPFMLIEFGSKGVLDLGIFLNLPITFAVLYLAIFCSAIAYLFW 233
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I+ A ST Y P++ +++ ILK ++ I +V+ + +
Sbjct: 234 NMSIRLAGASTTTNGIYFIPIIAMIADSIILKNIPNSYAIIAAVLVLFGVYI 285
>gi|39997770|ref|NP_953721.1| hypothetical protein GSU2676 [Geobacter sulfurreducens PCA]
gi|39984662|gb|AAR36048.1| membrane protein, putative [Geobacter sulfurreducens PCA]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 11/303 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV 72
+ + G F+ A ILWG T + + + + R+ + V
Sbjct: 1 MGGSGMAQAGRGGAWFILAAAILWGTTGTSQALAPVGANPMTIGALRLAVGGLALLLLAV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G ++ + L I + FF T T +PV++
Sbjct: 61 ARGGFTKGMR-----WPLIPTLCAGGCIASYQLTFFAAVKTTGVAVGTMVGIGSSPVMAG 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAYCFARKT 187
L + L ER A L + ++ G ++ A+ S +
Sbjct: 116 ILAFLVLGERPGRRWAGATALAVAGCSLLLATGGEVSVNPLGIALALGAGLSYAAYTLAI 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + V + + + L + + + +F
Sbjct: 176 KTLLAGRSPDAVIAVAFCLGALLLAPLLVGADLSWIPSVRGAVVVLHLGLIATALSYRLF 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ G++ +++ + PL + V ++ + + ++ + + +
Sbjct: 236 ARGLQTVPVASAVTLSLAEPLTATILGVTVVGERLTLTSLGGILLIFGGLALLAVGPRNR 295
Query: 308 SGK 310
SG+
Sbjct: 296 SGR 298
>gi|15804252|ref|NP_290291.1| putative permease transporter [Escherichia coli O157:H7 EDL933]
gi|15833848|ref|NP_312621.1| permease transporter [Escherichia coli O157:H7 str. Sakai]
gi|168766141|ref|ZP_02791148.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4486]
gi|168779876|ref|ZP_02804883.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4076]
gi|187775669|ref|ZP_02797317.2| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4196]
gi|188024755|ref|ZP_02773651.2| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4113]
gi|189401884|ref|ZP_02778551.2| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4401]
gi|189403708|ref|ZP_02784848.2| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4501]
gi|189404716|ref|ZP_02810616.2| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC869]
gi|189405714|ref|ZP_02823697.2| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC508]
gi|195936277|ref|ZP_03081659.1| putative permease transporter [Escherichia coli O157:H7 str.
EC4024]
gi|208808079|ref|ZP_03250416.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4206]
gi|208813919|ref|ZP_03255248.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4045]
gi|208820420|ref|ZP_03260740.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4042]
gi|209397051|ref|YP_002273189.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4115]
gi|217325740|ref|ZP_03441824.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. TW14588]
gi|254795666|ref|YP_003080503.1| putative inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|261225812|ref|ZP_05940093.1| predicted inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258857|ref|ZP_05951390.1| predicted inner membrane protein [Escherichia coli O157:H7 str.
FRIK966]
gi|291285081|ref|YP_003501899.1| YicL [Escherichia coli O55:H7 str. CB9615]
gi|12518485|gb|AAG58855.1|AE005597_13 putative permease transporter [Escherichia coli O157:H7 str.
EDL933]
gi|13364069|dbj|BAB38017.1| putative permease transporter [Escherichia coli O157:H7 str. Sakai]
gi|187771559|gb|EDU35403.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4196]
gi|188016985|gb|EDU55107.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4113]
gi|189002590|gb|EDU71576.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4076]
gi|189359372|gb|EDU77791.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4401]
gi|189364422|gb|EDU82841.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4486]
gi|189369687|gb|EDU88103.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4501]
gi|189374607|gb|EDU93023.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC869]
gi|189378790|gb|EDU97206.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC508]
gi|208727880|gb|EDZ77481.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4206]
gi|208735196|gb|EDZ83883.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4045]
gi|208740543|gb|EDZ88225.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4042]
gi|209158451|gb|ACI35884.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC4115]
gi|209754458|gb|ACI75536.1| lipoprotein-28 [Escherichia coli]
gi|209754460|gb|ACI75537.1| lipoprotein-28 [Escherichia coli]
gi|209754462|gb|ACI75538.1| lipoprotein-28 [Escherichia coli]
gi|209754464|gb|ACI75539.1| lipoprotein-28 [Escherichia coli]
gi|209754466|gb|ACI75540.1| lipoprotein-28 [Escherichia coli]
gi|217321961|gb|EEC30385.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. TW14588]
gi|254595066|gb|ACT74427.1| predicted inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|290764954|gb|ADD58915.1| YicL [Escherichia coli O55:H7 str. CB9615]
gi|320191238|gb|EFW65888.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. EC1212]
gi|320639383|gb|EFX08998.1| putative inner membrane protein [Escherichia coli O157:H7 str.
G5101]
gi|320644827|gb|EFX13863.1| putative inner membrane protein [Escherichia coli O157:H- str.
493-89]
gi|320650091|gb|EFX18587.1| putative inner membrane protein [Escherichia coli O157:H- str. H
2687]
gi|320661064|gb|EFX28500.1| putative inner membrane protein [Escherichia coli O55:H7 str. USDA
5905]
gi|326337289|gb|EGD61124.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. 1044]
gi|326341661|gb|EGD65450.1| carboxylate/amino acid/amine transporter [Escherichia coli O157:H7
str. 1125]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFTAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYAGQGTNFIVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|296536643|ref|ZP_06898716.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296263034|gb|EFH09586.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 280
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 87/272 (31%), Gaps = 7/272 (2%)
Query: 35 ILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
++ + + ++L+ V ++ R + V + L + +GM
Sbjct: 16 FVFNLETVLVKYLDGVPATTILLARTAGQILWVLPLL-------PREGLGLLRTRQLGMQ 68
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ + V WG + L + F + + L L ER+ + A LL
Sbjct: 69 LLRGLLSFVSWGLYYVGFLRLPLATATTLSFTSVLFVTALAGPLLGERVGPRRWAATLLG 128
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+L++ +PL A SA A + + ++ L +
Sbjct: 129 FAGVLLVVRPGVLPLDWPLAASLGSALFGAGIVLTTKALARTERTETIMLYIGLVATAGS 188
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
+ + L+G +L ++ ++ A S+V + Y + +++
Sbjct: 189 LPVALPYLTWPGWGNAALLLGAAILGPAGMHLWINALRLADASSVAPVSYVRLVFAVMAG 248
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + +D ++V + +
Sbjct: 249 ALLFAEALDLFLLAGALLIVGSAIYITRQGAR 280
>gi|153834387|ref|ZP_01987054.1| transporter, drug/metabolite exporter family [Vibrio harveyi HY01]
gi|148869235|gb|EDL68257.1| transporter, drug/metabolite exporter family [Vibrio harveyi HY01]
Length = 284
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 94/276 (34%), Gaps = 10/276 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + L + + ++ + + +E +S + + R L SL + +
Sbjct: 2 SPHHLALLLLVIGNLAASLSDVAVKLIEGSISPFQYMFVRQLASLLLILPFYLRQQPDKR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK +++ + + V + + ++ P++ + L +FL
Sbjct: 62 SLKQAPITLLRAHLILIGSGCMMVA-------VTHLPLATANAVFYAAPILMLPLSILFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE +I+ L +L++ A+ +A A I V
Sbjct: 115 KEHPPLSKILLTCFGFLGVLVVLRP--DHFHWAALFALGTATTLAMFNILVRKLPSEQSV 172
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L LF + + G ++ + + +I + + ++A +
Sbjct: 173 VTTLWWTTLFSLPISAVLAGFYWQPMTGQELVLVIVSAVCILSYNGLAVLAYQKAPAGEI 232
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ EY+ + + + ++ + D + + ++V+
Sbjct: 233 ALAEYSGLVFVTLFGIWWFDEIPDWLTAVGILMIVL 268
>gi|29833543|ref|NP_828177.1| hypothetical protein SAV_7001 [Streptomyces avermitilis MA-4680]
gi|29610666|dbj|BAC74712.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 311
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/279 (10%), Positives = 69/279 (24%), Gaps = 6/279 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + V R+++ + A+ L T +
Sbjct: 33 SLIWGFSFLLIKVGTAGYAPFHVTLGRLVFGTAVLAVAMAVKRERLPRGARTWGHLAVAA 92
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + + + + + V L R I L
Sbjct: 93 FFLNALPFSLFAYSELTIPSTLAGICNATSPLWGMALSLVALSEDRPTRRRVAGLGIGFL 152
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L G+ A+A+ S + G + L +
Sbjct: 153 GVLTVLGAWQGFHGLDATGTAMALLASLSYPIGWIYVRRTLAGSSHSHLSMTGAQLLLAT 212
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+P L + + +T ++ Y P
Sbjct: 213 AQLAFVTPLFTTLPSHFPVVPLLAIAALGALGTGLAVLLQYGLVAEVGPTTAQMVTYFIP 272
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
++ + V IL + + + IV+ +
Sbjct: 273 VIATAAGVAILGESLTWSTPVGAAIVLAGAALTQARARR 311
>gi|317471980|ref|ZP_07931312.1| integral membrane protein DUF6 [Anaerostipes sp. 3_2_56FAA]
gi|316900384|gb|EFV22366.1| integral membrane protein DUF6 [Anaerostipes sp. 3_2_56FAA]
Length = 305
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 88/291 (30%), Gaps = 19/291 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G F LWG T + T+ L Q +E++ R L +
Sbjct: 4 KKYIQGHFFALATIFLWGTTFISTKILLRQFQPIEILFFRFLLGFLVLILIY-------P 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T + + + +++ F AL ++P + L V
Sbjct: 57 KRLKTEGWREEKYFMAAGLCGITLYYLFENIALTYTMASNVGVIISISPFFTALLARVVT 116
Query: 140 -KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTI 188
++ L + LL + + +++ LS + +S +
Sbjct: 117 GEKSLGRRFFLGFLLAMCGICLISFGGTALHLSPKGDFLAVLAAFVWAAYSMLTKKIGSF 176
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + +++ S G F + L ++ F ++
Sbjct: 177 GHNIIQSTRRCFAWGLLFMAPVLLFTDISLGRQRFADPLNLGNLLFLGIGASAICFVTWN 236
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+KR + Y P++ I++SV IL + + + + + +
Sbjct: 237 TAVKRLGAVKTTVYIYMVPVVTIITSVLILGEKLTVRAACGAFLTIAGLFL 287
>gi|310659844|ref|YP_003937565.1| transporter [Clostridium sticklandii DSM 519]
gi|308826622|emb|CBH22660.1| Transporter [Clostridium sticklandii]
Length = 296
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 95/295 (32%), Gaps = 13/295 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
LS E + L +F LWG T +++ + + +I+ R + +
Sbjct: 6 LSTEELKKRRLYSNLALFLVAFLWGTTFAVSKYAFAYFTPVYMIAFRFTIGVLAMCIFFW 65
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + K + + I + + + AL + +F V++
Sbjct: 66 --------KKISKITLKDLKGGIIVGIIFFIAFVTQLIALQYTEAGKQAFLAATYVVMAP 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW----SAYCFARKTI 188
FL + ++ + + A + L + ++TL++ + + + A
Sbjct: 118 FLYWIIYHKKPDFRTLAGAFICFLGIGLLTLNASLSISFGDGLTLFSSLFYALHIMFNGY 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
V + + A+ A+ ++ F +G L + + +
Sbjct: 178 FVEKQDPVILSTVQFAVVAIISWIFAFFFEPFPTAIGFEGIASVLYLGIFCTGLAYFLQT 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + I+ + I+ +V +L + + + A+++ L
Sbjct: 238 AAQRYTLATHAAIILSLESVFGILLAVVMLGEIFTLRMLMGCIAIFGAILITELR 292
>gi|237722031|ref|ZP_04552512.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229448900|gb|EEO54691.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 291
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 92/284 (32%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R + G++
Sbjct: 10 LIAILVVAIWGLTFISTKVLINHGLTPQEIFFYRFFIAYLGIWVI-------SPKRLFAG 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q +F P+++ L + E+
Sbjct: 63 NWKDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKAT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I ++L ++ + ++ + L + + + + T +
Sbjct: 123 KGLIYGSILALIGVGLVVFNGSFVLKLSPVGDLLTLLAALSWAFYSLVIKKMTGRYPTVF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + L + + L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFFLHPLQPDFDVLLKPVVLSNLLFLAVLASLVCYVLWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y PL+ +V+SV IL + I + + G ++ +
Sbjct: 243 GTVRASNYIYLNPLVTMVASVIILHEKITWITLLGAGCIIFGVY 286
Score = 35.7 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 1/139 (0%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
L + + + + V + G + + Y+ S F
Sbjct: 5 HGYYHLIAILVVAIWGLTFISTKVLINHGLTPQEIFFYRFFIAYLGIWVISPKRLFAGNW 64
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK-QPIDTV 285
+ + G S F + + + S V + TAPLL + S+ K +
Sbjct: 65 KDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKATKG 124
Query: 286 RTIVFGIVVIAMVVYLLPT 304
+ +I + + +
Sbjct: 125 LIYGSILALIGVGLVVFNG 143
>gi|212703791|ref|ZP_03311919.1| hypothetical protein DESPIG_01839 [Desulfovibrio piger ATCC 29098]
gi|212672759|gb|EEB33242.1| hypothetical protein DESPIG_01839 [Desulfovibrio piger ATCC 29098]
Length = 345
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/299 (12%), Positives = 98/299 (32%), Gaps = 23/299 (7%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A + W + + + L + V++ R+ + LL+D +
Sbjct: 50 LALLLAMVFWSTSYVALRIALSALDPFTVMAGRMGVATLLFLPL------WGGLLRDLRR 103
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +L+ + ++ AL + P+I+ + L ER++
Sbjct: 104 KGQWRWLLLMAFAEPCCYFLLETRALCLTTASQAGMIISLLPLITAVVAWRLLGERVSLR 163
Query: 147 QIIAALLIILSLLIMTLHS----------------GIPLLSLAIAVTWSAYCFARKTIPV 190
I L + ++ ++L S G+ ++ A+ + A +
Sbjct: 164 GWIGFALAVAGVVWLSLQSAVDETATAPVLGNFFEGLAMVCAALYTVLARRLSAAYSPLQ 223
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ F+ M A + P + G+++ + +++ G
Sbjct: 224 ITAVQSFVGMSFFAGLLALAPLDYTPVLLHVEVPDWAPWASVVYLGGVVSLGGYGLYNVG 283
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ R + P+L + S V +L++ + + +VV +++
Sbjct: 284 VSRLSAAGAAAYTNLIPILTLASGVILLREVFLPGQYMASVLVVAGVLLSQWGGQKGRR 342
Score = 49.9 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 2/178 (1%)
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK 186
+ G L R A+ I+ P L+L +A+ + + +
Sbjct: 7 LFCSTFCSGFGMLLRRTEARAGRASGPGYRGGDIVMWVRIWPHLALLLAMVFWSTSYVAL 66
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
I + + + F + + + L ++ G + G L F +
Sbjct: 67 RIALSALDPFTVMAGRMGVATLLFLPLWGGLLRDLRRKGQWRWLLL--MAFAEPCCYFLL 124
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + S G++ PL+ V + +L + + I F + V +V L +
Sbjct: 125 ETRALCLTTASQAGMIISLLPLITAVVAWRLLGERVSLRGWIGFALAVAGVVWLSLQS 182
>gi|154488821|ref|ZP_02029670.1| hypothetical protein BIFADO_02129 [Bifidobacterium adolescentis
L2-32]
gi|154082958|gb|EDN82003.1| hypothetical protein BIFADO_02129 [Bifidobacterium adolescentis
L2-32]
Length = 324
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/323 (10%), Positives = 89/323 (27%), Gaps = 28/323 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + ++WG + Q + +S L + R + + + G
Sbjct: 1 MQRKEIGGMACLVLTAMIWGFAFVSQVQGMASMSPLFFGATRFTLGALSLIPLLWFRRRG 60
Query: 78 LSLLKDTLKNPKAVGMLV----------------------FSATILAVHWGFFIYALLTR 115
++ + + ++ + L +
Sbjct: 61 IAEQERRRRESNECPTVMLGNGITVAMPKCLGNPVVVSVICGIVLFTASTVQQYGILYSG 120
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-- 173
+ F + V++ L + L+ R+ I++ + ++ ++ + G ++LA
Sbjct: 121 SAGRSGFITALYIVMTPLLAFLILRRRVTMNVIVSVAIAVVGFYLLCITDGFGSITLADV 180
Query: 174 ---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
A + + ++ AL + + G +
Sbjct: 181 VLLSTAVLFAGHILVIDTFGQKMDPILLSFGQISTTALLSWIGSLCEGSIDWAGAMQSWF 240
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ + + G + S ++ V +L + + T I
Sbjct: 241 PIVYAGIGSAGVAYTLQVVGQQLVPPSRAAVIMSLESFFSAVGGALLLGEVMTTRAYIGC 300
Query: 291 GIVVIAMVVYLLPTVINSGKNKT 313
++ I V+ +P I K
Sbjct: 301 ALIFIGTVLAQVPVKIPRLLRKR 323
>gi|114771021|ref|ZP_01448461.1| possible transporter, DME family, DMT superfamily protein [alpha
proteobacterium HTCC2255]
gi|114548303|gb|EAU51189.1| possible transporter, DME family, DMT superfamily protein [alpha
proteobacterium HTCC2255]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 94/298 (31%), Gaps = 5/298 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N ++ + + +WG + L L +V V ++++RV+W+ ++F ++
Sbjct: 2 NQKTLSLSAWISLLSLATIWGGSFLAYSLILREVPVFTMVANRVVWASFTLWFVVLLLKL 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI----YALLTRQGFLTSFSYFVTPVISV 132
+ LK + L I ++L + +F+
Sbjct: 62 PMPNLKQCCVLFVMGFLNNAIPFSLIAWGQTHIESGLASILNGTTAIITFALASMVFRDE 121
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L V L L + ++ +L L S + + +++ ++ G
Sbjct: 122 RLSFVKSVGLLFALLGVCIIIGFDTLTNFNLRSLAQISLICACFSYAVAAIWARSKLKGV 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + + G + LG + + + ++ +
Sbjct: 182 NPIMAATGMLSSASIIMVPLAFIIDGVPDYDLGKTTIISMIFLSVPATAIAYLLYYRALN 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
A + + ++ P + I+ L + + + F ++ + M +
Sbjct: 242 LAGSANLSLVTLLVPPMAILWGFLFLGEKLVPSAYLGFLLITLGMCFIDGRLFNRKKR 299
>gi|89052632|ref|YP_508083.1| hypothetical protein Jann_0141 [Jannaschia sp. CCS1]
gi|88862181|gb|ABD53058.1| protein of unknown function DUF6 transmembrane [Jannaschia sp.
CCS1]
Length = 289
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 85/285 (29%), Gaps = 5/285 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + ++ + ++ L ++ V+ R + V +GG+
Sbjct: 4 NPRLGIYLMIATTFVFAMQDGISRHLAGEYNIFMVVMIRYWFFAAFVITIASRQAGGVRA 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + F +LA + A + + P++ L L
Sbjct: 64 A----AKTEQPVLQAFRGVLLAAEICVMVGAFVLLGLVEAHAIFTCYPLLVAALSGPVLG 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ + A + + +L++ A+ +A+ FA + +
Sbjct: 120 EKVGWRRWTAIGIGFVGVLVILQPGFGVFSIYALVPLAAAFMFALYNLLTRYAARKDRAA 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ G + + PD ++ + + + A+ S V
Sbjct: 180 TSFFWTGTAGALVMTCVGIWFWEPMSGPDWAWMALLCVTGATGHFLLIKTYDVAEASAVQ 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y + + + + + T I IV+ A + L T
Sbjct: 240 PFAYLQLVFASALGLLVFGEVLATNVAIGAAIVICAGLFTLWRTR 284
>gi|34496990|ref|NP_901205.1| hypothetical protein CV_1535 [Chromobacterium violaceum ATCC 12472]
gi|34102846|gb|AAQ59210.1| probable membrane protein [Chromobacterium violaceum ATCC 12472]
Length = 282
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 90/280 (32%), Gaps = 12/280 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G+ ++ A +L+ + L+ + + S E++ R L + + A ++ +
Sbjct: 7 RLGSGWMVVAAVLFALMGLFVKLGAKHFSSTELVFWRTLIGVLTLGGAALWRRERFA--- 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + I YA+ S + +P+ L V L+ER
Sbjct: 64 -----TPLLRYHLQRGVIGYSSLLMSFYAIAHLPLATASTLTYTSPMFLALLSVVLLRER 118
Query: 143 LNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
L + L ++++ L + L + ++ + +G
Sbjct: 119 LPAQALAGLALGFAGVVLLLKPTLSGDVWFAGLLGLASGFLAGWSYLHVRELGRQGEAEW 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V + V E + + + L+G G + + K + T
Sbjct: 179 RVVFYFALISTVGGLLLMSLERWHPVTLDNVGLLLGVGATATLAQLAMTRAYKVGRKLTA 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y + + + + + G+++++ ++
Sbjct: 239 ANLSYLTVVFSCLLGALVWGDALTADSLLAMGLIIVSGML 278
Score = 39.9 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ Y I L+T + YT+P+ + + SV +L++ + + +V+
Sbjct: 78 YSSLLMSFYAIAHLPLATASTLTYTSPMFLALLSVVLLRERLPAQALAGLALGFAGVVLL 137
Query: 301 LLPTV 305
L PT+
Sbjct: 138 LKPTL 142
>gi|229815647|ref|ZP_04445974.1| hypothetical protein COLINT_02698 [Collinsella intestinalis DSM
13280]
gi|229808877|gb|EEP44652.1| hypothetical protein COLINT_02698 [Collinsella intestinalis DSM
13280]
Length = 291
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 86/299 (28%), Gaps = 15/299 (5%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI 71
+G+S + + G +F + W + T++ Q S + + S + F +
Sbjct: 2 EGVSTTHDDRRALRGVFCLFGTAVCWSFMGILTKWNTQ-SPFLIGG---VTSTIVLVFTL 57
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
V L ++V F YA + + +
Sbjct: 58 VVARPQLRF----------SPLIVGVGLASFFTGLTFRYANQLTTVGNAIVLQYTSMIFV 107
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ S+ + ++ L + + + + + A +
Sbjct: 108 IVYQSLAERRMPALRHVLVVLGAFAG-MALFFMGSLSAEGMLGNLLAIASGASFGLQFYL 166
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+S + + ++ +V F + +SF +FS GI
Sbjct: 167 NSRPGAAPLVSSLVASVCSMVPLLFMFDRLPQVSPAEWGYMAASGVFCSSFANILFSKGI 226
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ T ++ + ++ S FI + ++V ++VV L +
Sbjct: 227 GKVPAFTANLICMSEVIMAPTWSFFIFGETFSETALAGAALIVASIVVNLALDARARSR 285
>gi|149910830|ref|ZP_01899463.1| putative membrane protein [Moritella sp. PE36]
gi|149806071|gb|EDM66052.1| putative membrane protein [Moritella sp. PE36]
Length = 297
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 88/293 (30%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L I+W + ++ + +R +L + ++ K
Sbjct: 3 FLLPLFTVIIWSGNSIVNILSTNVIAPETISFYRWFIALIALTPFLI----KPVWKKRHA 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + +A++ +A T + + + P++S+ L L
Sbjct: 59 IKPYLAKLAFLALLGMAINQSLAYFAAATTTVTNMTLIFSLVPLLSLIFSVPLLGLTLTK 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ A + + L+ M G+ + + + +Y +
Sbjct: 119 RAVFGAAISLTGLVYMLSQGQVSNLLAEGLNIGDSLMLIAACSYSLYGVLLKRWRLPFNN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + L + L L + ++ I
Sbjct: 179 WIALYVQMVFAVIILLPVLTYNGQVSLSSESLPLVLYAAIPTSILATWLWMQSIHHLGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ + + FIL + + + + I +V+ + + L + ++GK
Sbjct: 239 KTAMFMNLLPVFTAIMATFILDEQLSSYQFIGGTLVLTGVAMTQLKSKKSAGK 291
>gi|229058323|ref|ZP_04196708.1| Transporter, EamA [Bacillus cereus AH603]
gi|228719997|gb|EEL71586.1| Transporter, EamA [Bacillus cereus AH603]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 89/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLIVGFFLCVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K+R ++ + L ++T L I V A FA P
Sbjct: 120 KQRATIFIVLGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|229074337|ref|ZP_04207375.1| Transporter, EamA [Bacillus cereus Rock4-18]
gi|228708779|gb|EEL60914.1| Transporter, EamA [Bacillus cereus Rock4-18]
Length = 316
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 100/305 (32%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIRPQEVGEQILFAGYRFFLSGVMLLLFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K +G+ + + G + + + S+F + +
Sbjct: 74 MQFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +I+ + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIMGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLGAAMMYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F N+ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSVGLLCIGALQVGAMPFTFNLYTILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQKM 309
Query: 310 KNKTK 314
+ K +
Sbjct: 310 EQKKQ 314
>gi|215489005|ref|YP_002331436.1| predicted inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
gi|312967926|ref|ZP_07782138.1| carboxylate/Amino Acid/Amine Transporter family protein
[Escherichia coli 2362-75]
gi|215267077|emb|CAS11522.1| predicted inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
gi|312287487|gb|EFR15395.1| carboxylate/Amino Acid/Amine Transporter family protein
[Escherichia coli 2362-75]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSMLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYAGQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|218902807|ref|YP_002450641.1| transporter, EamA family [Bacillus cereus AH820]
gi|218536484|gb|ACK88882.1| transporter, EamA family [Bacillus cereus AH820]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + + LL F ++ V+ L +FL
Sbjct: 64 KQHIKQSSL----AGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|150392307|ref|YP_001322356.1| hypothetical protein Amet_4626 [Alkaliphilus metalliredigens QYMF]
gi|149952169|gb|ABR50697.1| protein of unknown function DUF6, transmembrane [Alkaliphilus
metalliredigens QYMF]
Length = 283
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 79/260 (30%), Gaps = 9/260 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L++ A + + + ++ + ++ + R + + I
Sbjct: 6 KGILYMLLASLFFALMASAVKYAGDLPTMQKVFFRNIVGFLISGYMIYRSGASFQGTNKK 65
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + YA+ + P + L + FL E++
Sbjct: 66 YL--------FYRSLFGLIGVFLSFYAIDRLPLADAVVLNQMNPFFVLILSAFFLGEKIK 117
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
LQ+ A ++ IL ++ + + A+ SA A + ++
Sbjct: 118 KLQVPAIIIAILGVVFIIRPQFDYTVFPALMGLLSAVFAAAAYTIIRHLRLTDHPQVIVF 177
Query: 205 IPA-LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
F F + + L L+ GL + + ++ + A+ + I
Sbjct: 178 YFTGFSVFSTLPFMLLGQFQIPTLFQLLALLSVGLFATIAQLLMTHAYRYAEAGDLSIYS 237
Query: 264 YTAPLLMIVSSVFILKQPID 283
Y + + + + + D
Sbjct: 238 YAKTVFSALLGILLWAEIPD 257
>gi|149201035|ref|ZP_01878010.1| hypothetical protein RTM1035_15457 [Roseovarius sp. TM1035]
gi|149145368|gb|EDM33394.1| hypothetical protein RTM1035_15457 [Roseovarius sp. TM1035]
Length = 288
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 86/287 (29%), Gaps = 5/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T +G + +++ ++ L + +VL V+ R + V +GGL
Sbjct: 4 QNTRLGIWLMVLTTVIFAAQDGISRHLAENYNVLMVVMIRFWFFAAFVMVIAARKAGGLR 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T + M F A +L +Y + P++ L L
Sbjct: 64 AAATTSQPL----MQGFRAVLLVAEICVMVYGFTLLGLIEVHAVFACYPLLIAALSGPVL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ER+ + +A + + +LI+ + AI +A FA +
Sbjct: 120 GERVGWRRWLAIAVGFIGVLIILEPGLGVIDPKAIVPFIAALMFALYGLLTRYVARKDTA 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V +G + ++I + + + A+ S V
Sbjct: 180 ATSFFWTGTVGSVAMTLAGIWFWEPMTSDAWAWMITLCITGAAGHYTLIKCYEVAEASAV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y + +FI + I + +VV A + L
Sbjct: 240 QPFAYLQLFFVTGIGIFIFGETIALNVALGGALVVGAGLFTLWRQRK 286
>gi|332288816|ref|YP_004419668.1| threonine and homoserine efflux system protein [Gallibacterium
anatis UMN179]
gi|330431712|gb|AEC16771.1| threonine and homoserine efflux system protein [Gallibacterium
anatis UMN179]
Length = 305
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 102/286 (35%), Gaps = 15/286 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G +F +G+ PL+T L +S V+ +R + + F +
Sbjct: 8 KGFIFGCIGASFYGLNPLFTLPLYELGLSPDSVLFYRFSVASLILAFIM------QQQKI 61
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ ++F + A+ + + + S F+ P++ + +F KER
Sbjct: 62 SFSLTKTELVAVIFVGVMFAISSLALFMSYQLIEAGIASTILFIYPLLVAVMMIMFFKER 121
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEG 195
+N + ++A L+I + ++ + L+ A+T++ Y A + P+ +
Sbjct: 122 INLITMLAITLVIFGVSMLYQGNDGSSLNPFGVLLVFISALTYAIYIIAVEKSPLHNLPI 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L AL + + F + + + + + I+
Sbjct: 182 IKLTFYGLLFSALVFFLRLDFGTHLQVNNSSQFFINIIGLAIVPTVLSLVLMNQSIQMIG 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+T I+ P+ ++ V + + + ++ A+V+ +
Sbjct: 242 STTASIIGALEPITALLVGVLVFHEQMTVRILFGIIAILSAIVLTV 287
>gi|322515198|ref|ZP_08068197.1| DMT superfamily drug/metabolite transporter [Actinobacillus ureae
ATCC 25976]
gi|322118808|gb|EFX91009.1| DMT superfamily drug/metabolite transporter [Actinobacillus ureae
ATCC 25976]
Length = 288
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/289 (15%), Positives = 107/289 (37%), Gaps = 6/289 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G ++ A L+G L ++S + R++ +LP + FA+ +
Sbjct: 3 LGIIYSLSASALFGGMYYLATLLRRLSGESLFGIRMVVTLPFLLFALFVLKKQAEFVAFA 62
Query: 85 LKNPKAVGMLVFSATILAV---HWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + +++ A+ F++A + + S Y + P+++V LG + KE
Sbjct: 63 KRLKQKPHLILVLLLTSAIVGSQMWLFLWAPNSGKALEVSMGYLLMPIVAVALGKIVFKE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ ++ +L + +G + +A +
Sbjct: 123 HFTLLKWLSLGFAVLGVTSNIWLTGSFSWTTIVAGVGYPLYITLRRYF--GINTLATFFV 180
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + F + + + N FL +GL+N F ++ ++ G+
Sbjct: 181 ELLLVMPFAGYFIAQADMQLIIADNQYIYYFLALFGLVNGAAFILYIASSNLLPVNVPGL 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ Y PL+M+ S I + +D+ ++ + +A+ + + + K
Sbjct: 241 LGYVEPLVMLCISFMI-GEVLDSKSYLLMICLALAISLLTIDNFRLARK 288
>gi|309704110|emb|CBJ03457.1| putative membrane protein [Escherichia coli ETEC H10407]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVLLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|170682291|ref|YP_001745978.1| carboxylate/amino acid/amine transporter [Escherichia coli SMS-3-5]
gi|218691951|ref|YP_002400163.1| hypothetical protein ECED1_4353 [Escherichia coli ED1a]
gi|306815983|ref|ZP_07450121.1| hypothetical protein ECNC101_05214 [Escherichia coli NC101]
gi|331660005|ref|ZP_08360943.1| putative permease transporter [Escherichia coli TA206]
gi|170520009|gb|ACB18187.1| carboxylate/amino acid/amine transporter [Escherichia coli SMS-3-5]
gi|218429515|emb|CAR10479.2| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|222035377|emb|CAP78122.1| Uncharacterized inner membrane transporter yicL [Escherichia coli
LF82]
gi|281180714|dbj|BAI57044.1| putative transport protein [Escherichia coli SE15]
gi|305850379|gb|EFM50836.1| hypothetical protein ECNC101_05214 [Escherichia coli NC101]
gi|312948230|gb|ADR29057.1| hypothetical protein NRG857_18240 [Escherichia coli O83:H1 str. NRG
857C]
gi|323965925|gb|EGB61373.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli M863]
gi|327250788|gb|EGE62490.1| carboxylate/Amino Acid/Amine Transporter family protein
[Escherichia coli STEC_7v]
gi|330907984|gb|EGH36503.1| hypothetical protein ECAA86_04008 [Escherichia coli AA86]
gi|331053220|gb|EGI25253.1| putative permease transporter [Escherichia coli TA206]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|156977794|ref|YP_001448700.1| hypothetical protein VIBHAR_06582 [Vibrio harveyi ATCC BAA-1116]
gi|156529388|gb|ABU74473.1| hypothetical protein VIBHAR_06582 [Vibrio harveyi ATCC BAA-1116]
Length = 295
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 1/287 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ C +WG + L+ + +I RV ++ + +Y + K
Sbjct: 9 LLCLAAIWGGSFLFMRVAANTFGPAYLIEFRVAFAAVALLLIALYLRKRVVFFKHIKHFF 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+L + + A T+ + + + K L +
Sbjct: 69 IIGLFNSAVPFLLFAYAAQTLNASTLAILNSTAPIWGALIGFVWYRSPLSAKAILGMMIG 128
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
I + +++ L T+ A + +Y A F A+
Sbjct: 129 IGGVAVLVGLDSSTIGDEAIFPIGASLMASFSYGIATNYTKNARQVPAFDNAHGSMWAAV 188
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+V+ + L + ++ + + ++ + + P+
Sbjct: 189 IWVLPLLPFLPMRAEPSTFEWGSVITLGVLCTGLAYLLYFHLVSEIGPTSALTVTFLVPV 248
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ IL +PI I +V+ ++ + + K
Sbjct: 249 FGILWGYLILGEPIGFNTIIGTILVLSGTMLVTGFSPAAVLAKRRAK 295
>gi|295705406|ref|YP_003598481.1| hypothetical protein BMD_3291 [Bacillus megaterium DSM 319]
gi|294803065|gb|ADF40131.1| integral membrane protein (DUF6) [Bacillus megaterium DSM 319]
Length = 306
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 96/299 (32%), Gaps = 9/299 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+L G FV I WG+ Q L ++SV ++S R+L + + +
Sbjct: 3 NLSRKKGFFFVTTGAICWGMGGTVAQKLFQEFEISVDWLVSVRLLIAGFLLLMISCIKNN 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ A+ ++VF+ + ++ ++ + + +++PV+ +
Sbjct: 63 HSHVFGVWKNRKAALQLVVFAIFGMLAVQYTYMASIKHGNAAVATLLQYLSPVMIIIYLL 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + +I LL + + + I LS+ ++
Sbjct: 123 LRKQSIFTRQDVITVLLALGGCFFLLTNGSISQLSVPVSAVVWGVLSGGAAAFYTLYAVP 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFL------GNIPDTLFLIGYGLLNSFVFCIFSYG 250
I+ + + +V G I L F +
Sbjct: 183 LIKKYSSLVIVGWSMVIGGSVMSFIHPPWEASSLSPITCGYILFVIIFGTMLAFWFYVES 242
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ ++ PL ++++V LK+P + I ++ +++ +S
Sbjct: 243 LQSLLPKETSLLGSLEPLAAVITTVVWLKEPFGFYQWIGTACIIGLVLLLTRTKQASSK 301
>gi|293401410|ref|ZP_06645553.1| putative transporter, EamA family [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305048|gb|EFE46294.1| putative transporter, EamA family [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 284
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 102/278 (36%), Gaps = 12/278 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A I++G + + + S + R L + +++ SL K K
Sbjct: 12 MILAMIIFGTLAPFVRNVATSSA-TIAFSRTLLGAIVLQIMLLFKRQTHSLAKGERK--- 67
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
++V SA LA +W F + + + Y+ P++++ L +F E L QI
Sbjct: 68 ---LMVLSAAALAGNWIFLFESYRYVSVSIATMLYYTAPILALLLSFIFFHEPLTKRQIG 124
Query: 150 AALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+L ++ ++++ + + + + + G + L+I
Sbjct: 125 CFILTLIGCILISWQPQSAFNLRGVIMGLCAAFCYAMILLLQRFRKPMPGLLLTSWQLSI 184
Query: 206 PALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ ++ S + L + + + ++ + + L+ + Y
Sbjct: 185 AAILLGIYLVISKDTTMLHISLAQLPWLLCIGIVHTALAYYLYFHALAHLALARSALYSY 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
PL I+ S IL++ ++ ++ AM++Y
Sbjct: 245 LDPLTAILLSFLILQESCTGMQGSGIVLLFSAMLLYSY 282
>gi|294661350|ref|YP_003573226.1| hypothetical protein Aasi_1859 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336501|gb|ACP21098.1| hypothetical protein Aasi_1859 [Candidatus Amoebophilus asiaticus
5a2]
Length = 285
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/291 (10%), Positives = 89/291 (30%), Gaps = 8/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + I+ T++L + ++ R + + + ++Y
Sbjct: 1 MKYFKAIFWFTLSLIVSCGNDAITKYLGYTFNPWQITFFRFAFGILTLLPVMLYQGKS-- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + V + + ++ F P+ + L +FL
Sbjct: 59 -----AFITYRWKLHFLRGLFVFVAISLWSQGIKVSPITTSTIMSFTVPIFVLVLAPIFL 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KER+ +A L + +L + ++ +A F I
Sbjct: 114 KERVTWPMWLATLGGFVGILFVLQPDVHTFNQGSLFFIIAAILFGMLDILNKKYVTQEPM 173
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+C+L + ++ F + + + ++L+ G+ ++ + S++
Sbjct: 174 LCMLFYSTVVALILVTFPAMQVWRTPTNYELMWLLVLGIGSNLILYCILRAFSLTDASSL 233
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y L+ +V + + + I++ + + N K
Sbjct: 234 SPFRYIELLISMVVGYVFFHELPSSYSYLGAAIIIPSTLFIGYYQTRNQPK 284
>gi|110644007|ref|YP_671737.1| hypothetical protein ECP_3865 [Escherichia coli 536]
gi|218560740|ref|YP_002393653.1| hypothetical protein ECS88_4084 [Escherichia coli S88]
gi|110345599|gb|ABG71836.1| putative membrane protein [Escherichia coli 536]
gi|218367509|emb|CAR05291.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
gi|294490272|gb|ADE89028.1| carboxylate/amino acid/amine transporter [Escherichia coli IHE3034]
gi|307555803|gb|ADN48578.1| carboxylate/amino acid/amine transporter [Escherichia coli ABU
83972]
gi|323955043|gb|EGB50821.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli H263]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFIHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|90413385|ref|ZP_01221378.1| transporter, drug/metabolite exporter family protein
[Photobacterium profundum 3TCK]
gi|90325627|gb|EAS42096.1| transporter, drug/metabolite exporter family protein
[Photobacterium profundum 3TCK]
Length = 320
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 13/290 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G LF A +W + ++ + + +R ++L + + L
Sbjct: 16 IGFLFPILAVAIWATNAVVSKMATATIEPGAIAFYRWFFALLLLTPFCLTTVYRQRLQIK 75
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ V ++ + ++ YA T + + P+ +FL L +L
Sbjct: 76 VHLTK----LTVLASLGMVLNQSLAYYAAYTTSATNIAIFLSLMPLFGLFLAVPLLGTKL 131
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+I AL+ + L+ M L F S L
Sbjct: 132 RIHTLIGALISFIGLVYMLSEGNPNQLLTQGFKQGDMLMFVSSLSYALYSVLLNRWKLPL 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF--------CIFSYGIKRAK 255
Y + + L + T + + +F + G+ +
Sbjct: 192 TPWCAVYCQVFLGALLQLPLLLSSETTAISLSALPMVAFAAFAASIIAPWCWLKGVTQIG 251
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + PL S+ +L I G+V++ + + + V
Sbjct: 252 AARSTLFMNLVPLFTASMSIVMLGIHPSQYHLIGGGMVLVGLTLAQMKRV 301
>gi|32266396|ref|NP_860428.1| hypothetical protein HH0897 [Helicobacter hepaticus ATCC 51449]
gi|32262446|gb|AAP77494.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 329
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/298 (14%), Positives = 97/298 (32%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L + + L+ + + L + +EV R V ++
Sbjct: 1 MKQNITQGILAMLISSFLFALMSAEAKILSDSIPPMEVAFFRS-----FVMILLLLPLLF 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+K +LV A + + Y + T S P+ V L +
Sbjct: 56 NKPMKLPRHKSGGWWILVARAGAGGLSFVALFYNIATISLGTASAFAQSMPLYVVVLSII 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIP 189
FLKE N I++ +L + +L++ S L L +++ +
Sbjct: 116 FLKEHFNVGVILSTILGFIGILLICNPSLNELEMLNIVFGIAGALSMAVAFLNLRALKDY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S F +++ AL E + + N + L + G + +
Sbjct: 176 FSSWVIVFSTGVAMSVMALLLSWCGVPYFDEQWVMPNGIEWLHIALLGFFGTLGQHYLTK 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + ++YT + ++ V + + ++ +++++ V LP ++
Sbjct: 236 AYMIAPAGIIAPIDYTRLVFSVILGVILGDALPNLPTSVGIVLIILSGVGVGLPVLLA 293
>gi|34557319|ref|NP_907134.1| hypothetical protein WS0930 [Wolinella succinogenes DSM 1740]
gi|34483035|emb|CAE10034.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 96/295 (32%), Gaps = 22/295 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ T++ + A +WG + + ++ VI R+L++ + I
Sbjct: 2 SNRSTLLPYGALILAMFIWGSSFIALKYAFISYDSSWVIFWRLLFATLFLLLFI------ 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + +L+ + +++ F A+ + PV+ L +
Sbjct: 56 PKMSLRSFRPQDLPALLLMALLEPCLYFVFESKAIENTTASQAGMISSMLPVLVALLAAW 115
Query: 138 FLKERLNHLQIIAALLI--------------ILSLLIMTLHSGIPLLSLAIAVTWSAYCF 183
L ERL +I L+ + + + L L A +
Sbjct: 116 LLGERLKSRMMIGFLVAILGALWLSLSSSLSDYAPNPLLGNFLEFLAMLCAAFFTISVKR 175
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ GF M L L + G L + +++
Sbjct: 176 LSQRYNAFFLTGFQSLMGALFFGVLTFASPLSEPMGR-DELHFGAIGAIVYLGVVVSFGG 234
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +++Y + + + S PL ++ +L + +++ + G++ + +V
Sbjct: 235 YGLYNYALSKVEASQAAGFTNLIPLFSLILGYLLLGETLNSSQLFGCGLIFLGVV 289
>gi|84497073|ref|ZP_00995895.1| hypothetical protein JNB_12803 [Janibacter sp. HTCC2649]
gi|84381961|gb|EAP97843.1| hypothetical protein JNB_12803 [Janibacter sp. HTCC2649]
Length = 301
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 84/296 (28%), Gaps = 14/296 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+P + + WG T + LE L + + R L + +
Sbjct: 1 MPVRTRLIVTALLILAWGSTFTSIKIALEGCPPLVLAATRCLIGGGLLALVALASGRRPG 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + + +G + A+ S ++ PV +V L L
Sbjct: 61 L------RGNLGPYALLAQLNVVGFFGLQVLAIDHLDSGYASLLLYLQPVFTVLLARPLL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ L ++++ AL + +++L + S IA+ + +E
Sbjct: 115 GDPLGPVRVLGALTAFAGVAVVSLRHDGQVSSSGIALAVATALCWSLGTITVKRTVSRVE 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPD-------TLFLIGYGLLNSFVFCIFSYGIK 252
L + G+ + + + + + +
Sbjct: 175 PLWAVALPLVGGGVLLAAVAATAGPGSDGLDLTPRVGAAIAWTALIGTALAWLFWMHLVT 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ V + + P++ ++ +L + + + +V +
Sbjct: 235 TGEVGRVAVSIFLVPVVAVLLGWLVLDEQLGWPLAVGTVLVCAGVFAVNRWPGRRR 290
>gi|218707293|ref|YP_002414812.1| hypothetical protein ECUMN_4178 [Escherichia coli UMN026]
gi|293407285|ref|ZP_06651209.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298383031|ref|ZP_06992626.1| inner membrane transporter yicL [Escherichia coli FVEC1302]
gi|300895803|ref|ZP_07114388.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
198-1]
gi|218434390|emb|CAR15318.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|284923733|emb|CBG36830.1| putative membrane protein [Escherichia coli 042]
gi|291426096|gb|EFE99130.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|298276867|gb|EFI18385.1| inner membrane transporter yicL [Escherichia coli FVEC1302]
gi|300360274|gb|EFJ76144.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
198-1]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYAGQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|195396216|ref|XP_002056728.1| GJ11095 [Drosophila virilis]
gi|194143437|gb|EDW59840.1| GJ11095 [Drosophila virilis]
Length = 349
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 91/301 (30%), Gaps = 27/301 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + + L V+ +E+ S R + + AI +
Sbjct: 36 LGIILATLSSLFFSLCSVIVKGLVDVNPMELASFRFV---GVLLPAIPILIYTRQPVFPE 92
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K + T L + YA S F TPV VFLKE
Sbjct: 93 GKRVILLLRCFMGTTGLMLS----FYAFRHMPLADASVIIFSTPVFVAIFARVFLKEPCT 148
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG------------- 191
++ + +L ++++T + A+ Y I
Sbjct: 149 LFNVLTINMTLLGVVLITKPPLAFGDANHHAMDSEKYSDKTYDIWGPVAAISSTLFGANV 208
Query: 192 -------SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ F + M AL Y + S G + D ++ G+ +
Sbjct: 209 YILLRALKNLHFSVIMTNFGAIALVYTLIVCGSIGAVCWPSCGRDRWLVVVLGIFSFLGQ 268
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + ++ + V I + + + + + +VV ++++ +
Sbjct: 269 ILLTLSLQVEQAGPVAIARCADIVFAFIWQILFFGEAPNAYSLCGALMVVSSVILTAMKK 328
Query: 305 V 305
Sbjct: 329 W 329
>gi|187927963|ref|YP_001898450.1| hypothetical protein Rpic_0868 [Ralstonia pickettii 12J]
gi|187724853|gb|ACD26018.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii
12J]
Length = 311
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 93/287 (32%), Gaps = 14/287 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G + + + +G ++T + +V+ ++ R + + + + G+
Sbjct: 16 KLLGVMLIAVSAASFGAMAIFTHYAYASGANVVGLLIVRFVIAAASLMAVMRVRRIGIPP 75
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
VG+ A F AL L + ++ P+ L ++FL+
Sbjct: 76 WSR------VVGLAAMGGIGYAGQSFAFFTALNYAPASLVALLLYLYPMFVTVLAAIFLR 129
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV------GSSE 194
ERL IIA +L + + +G+ SL A +
Sbjct: 130 ERLTTTAIIALVLCSVGAGLTVGGAGLSGGSLLGIGLGVASAVIYSIYITVGARVTRGLD 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ A+ Y H L GL F G+++
Sbjct: 190 PLACTTVICTAAAVVYTGMALLGAPAHLPGSFSGWAAALAIAGLSTVVAILTFFAGLQKL 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ P++ ++ + +L + I ++ +++ ++
Sbjct: 250 GAAQASMLSTLEPVVTVLLAALLLGESIAPMQMAGGALILAGVLWLT 296
>gi|227497269|ref|ZP_03927501.1| DMT family permease [Actinomyces urogenitalis DSM 15434]
gi|226833140|gb|EEH65523.1| DMT family permease [Actinomyces urogenitalis DSM 15434]
Length = 302
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 87/277 (31%), Gaps = 14/277 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L V ++WG T + ++++ ++ ++ R + + + L
Sbjct: 9 LAVLTITVIWGSTFFIIKDAVDRMEPIDFLAIRFTIAAALIALVLWPRLRRLPA------ 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + Y L ++ F V++ + +FLK RL+
Sbjct: 63 --GGWRAGLGLGVLYGLAQIAQTYGLKHTSASVSGFITGTYVVLTPIILWLFLKVRLSAQ 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+A L L L ++TL G + + A + +
Sbjct: 121 AWVAVALACLGLGVLTLTGPAAMGWGEWLTLLGAFFYALHIVVLERFAPQWDALALTAVQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL + GG H + + + ++ + + +M
Sbjct: 181 LVGVALTCL-VAAIPGGVHLSADPVAWRAIAYTVLVAGIATMLLQTWAQRHLSATRTALM 239
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + ++ + + + I G+++ A V+
Sbjct: 240 MTFEPVFASLFAIALGGEHLSARLLIGGGVILAATVL 276
>gi|184155434|ref|YP_001843774.1| transport protein [Lactobacillus fermentum IFO 3956]
gi|260662055|ref|ZP_05862951.1| drug/metabolite exporter family protein [Lactobacillus fermentum
28-3-CHN]
gi|183226778|dbj|BAG27294.1| transport protein [Lactobacillus fermentum IFO 3956]
gi|260553438|gb|EEX26330.1| drug/metabolite exporter family protein [Lactobacillus fermentum
28-3-CHN]
Length = 300
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/295 (9%), Positives = 91/295 (30%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G WG + Q+L ++ + +++ R+L+ + +
Sbjct: 2 TKKSKGLWMAIIGASFWGGSGAAAQYLFANTSMTAIWLVTVRLLFGGGIMLLIGLARHRD 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K +++F+ ++ A+ + +++PV+ + +
Sbjct: 62 QIKAILSNK-RDIAILVIFAFLGNFNSQLTYMLAVQASNASTATVIQYLSPVLIILWLAF 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+E + +I+ + ++ ++ P + + A
Sbjct: 121 RNREWPRRIDVISIIFALVGTFLLVTGGRLDALTITPNALMWGSSAALAASIYTLAPRSL 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I +C +A+ + + + + F +
Sbjct: 181 LARYDTITVCGMAMFLGGLCISPNLFLTPVPHFTGLEWLDLIYIVVFGTMMAYTFFLGSV 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
K + G++ PL+ +V +L + ++ + +++ +++ +P
Sbjct: 241 KYISPALTGMLSAFEPLVATFLTVTLLGTKLTSITLLGSFLIIFGILIESIPFKR 295
>gi|160874681|ref|YP_001553997.1| hypothetical protein Sbal195_1564 [Shewanella baltica OS195]
gi|160860203|gb|ABX48737.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS195]
gi|315266922|gb|ADT93775.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS678]
Length = 295
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 76/284 (26%), Gaps = 8/284 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + +E +S R L + + Y L K+ +L
Sbjct: 13 IWGFGFVAQTLGMEHLSPFAFNGIRFLMGTFSLVPLVWYLRRQNKLHVSAPKDLVRGSLL 72
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+L F L F + V+ LG + LK + +
Sbjct: 73 --VGVLLFAGASFQQVGLQYTTAANAGFITGLYIVLVPVLG-LALKHTTGLNTWLGCAIA 129
Query: 155 ILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L +++ G+ + + + A + M + +
Sbjct: 130 AVGLYFLSVKDGMSIGYGDALQLVGAFFWALHILAVDHFAKRISPVVLAMMQFFVCGVLS 189
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
++ + + + + K A + I+ +
Sbjct: 190 LMVSAVIEVTTLDGVTAAWGSLFYAGLISVGIAYTLQVLAQKNAHPAHAAIILSLETVFA 249
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + L + + G++++ M++ +P K
Sbjct: 250 AIGGIIFLDESLSVRALFGCGLMLLGMLISQVPLRYLVKSRHQK 293
>gi|121609193|ref|YP_997000.1| hypothetical protein Veis_2234 [Verminephrobacter eiseniae EF01-2]
gi|121553833|gb|ABM57982.1| protein of unknown function DUF6, transmembrane [Verminephrobacter
eiseniae EF01-2]
Length = 322
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 83/294 (28%), Gaps = 15/294 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F I + + + V + +I +R+L++LP + G L
Sbjct: 33 GLALAFLGSIAFSGKAIIVKLAYRHGVDAVTLIMYRMLFALPIFAAMAWWAGRGQPALT- 91
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+G+L T + L L ++ P + V LG + + +
Sbjct: 92 ---RKDWLGVLGLGFTGYYLGSFLDFAGLAYVSAGLERLILYLNPTLVVLLGWLLYRRGI 148
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE---- 199
Q LL ++++ H + A + + A G ++
Sbjct: 149 GWGQAAGMLLSYCGVVLVFGHEAHLQGANAAWGSLLVFLSAVSYAIYLVYSGELVQRLGS 208
Query: 200 -----MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + L L+ L + + ++R
Sbjct: 209 LRLVGLATTVACLCCLAQFALLRPLSAAVVAPEVIWLSLLNATLCTAAPVLMVMMAVERI 268
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
PL IV V+IL +P +V+ + V+
Sbjct: 269 GAGVAAQTGMVGPLSTIVMGVWILDEPFTVWVAAGTVLVIAGIFVFTRMARQRR 322
>gi|301597938|ref|ZP_07242946.1| hypothetical protein AbauAB059_19033 [Acinetobacter baumannii
AB059]
Length = 294
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 1 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 60
Query: 79 SLLK----DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + A + I ++ + I + + ++F
Sbjct: 61 KIAFISSTPSKLSVFAQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 121 GRFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 181 NGGLFLTKYLLLFGSVYLAVPFLVNLHSITFNSDIILGLIGLAVLPTILGFFCTTKALSY 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 241 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 287
>gi|299783235|gb|ADJ41233.1| Drug/metabolite exporter family protein [Lactobacillus fermentum
CECT 5716]
Length = 305
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/295 (9%), Positives = 91/295 (30%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G WG + Q+L ++ + +++ R+L+ + +
Sbjct: 7 TKKSKGLWMAIIGASFWGGSGAAAQYLFANTSMTAIWLVTVRLLFGGGIMLLIGLARHRD 66
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K +++F+ ++ A+ + +++PV+ + +
Sbjct: 67 QIKAILSNK-RDIAILVIFAFLGNFNSQLTYMLAVQASNASTATVIQYLSPVLIILWLAF 125
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+E + +I+ + ++ ++ P + + A
Sbjct: 126 RNREWPRRIDVISIIFALVGTFLLVTGGRLDALTITPNALMWGSSAALAASIYTLAPRSL 185
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I +C +A+ + + + + F +
Sbjct: 186 LARYDTITVCGMAMFLGGLCISPNLFLTPVPHFTGLEWLDLIYIVVFGTMMAYTFFLGSV 245
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
K + G++ PL+ +V +L + ++ + +++ +++ +P
Sbjct: 246 KYISPALTGMLSAFEPLVATFLTVTLLGTKLTSITLLGSFLIIFGILIESIPFKR 300
>gi|283851179|ref|ZP_06368462.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
gi|283573348|gb|EFC21325.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
FW1012B]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/287 (9%), Positives = 74/287 (25%), Gaps = 8/287 (2%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL--LKDTL 85
++WG+ + + ++ V + R + V
Sbjct: 11 LCLVTALIWGLAFVAQRMGMDHVGPMAFNGIRFALGAAVLAPLAVRSMRYPPPAPFLAGS 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + +L L F + V+ LG +F K+R
Sbjct: 71 RDGFPWLGGLLAGGVLFAGATLQQVGLQYTTAGKAGFITGLYVVLVPLLG-LFFKQRPAR 129
Query: 146 LQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ A+ + L ++ + + A + + M
Sbjct: 130 GDVVGAVAAAIGLYFLSVTEDFTLAPGDGLELVGAVFWACHVLVIGWLSPRTRALPLAMA 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ + + G L + + + AK + I
Sbjct: 190 QYVVCSVLSLACALAFEDLTWTGVRGAAWPIFYGGLLSVGLAYTLQVVAQRDAKPTHAAI 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + +L + + + ++ M+ L +
Sbjct: 250 LLSFETVFAAIGGAVLLDESLGSRGLFGCALMFGGMLASQLWPRRKA 296
>gi|229120070|ref|ZP_04249324.1| Transporter, EamA [Bacillus cereus 95/8201]
gi|228663389|gb|EEL18975.1| Transporter, EamA [Bacillus cereus 95/8201]
Length = 316
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K ++ + + F + G + + + L
Sbjct: 74 MNFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|254464413|ref|ZP_05077824.1| possible transporter, RhaT family, DMT superfamily [Rhodobacterales
bacterium Y4I]
gi|206685321|gb|EDZ45803.1| possible transporter, RhaT family, DMT superfamily [Rhodobacterales
bacterium Y4I]
Length = 297
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/289 (9%), Positives = 81/289 (28%), Gaps = 8/289 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + G L V + + + ++ + L + I + VF + G
Sbjct: 1 MNNLHGILLVIASMAFFTLEDMFIKQLSGTLPVGQILICLGVGSGLVFAVMARMQGHSLF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + ++ + + + +T ++FLG
Sbjct: 61 APRCWRLRPVLRASTEAVSAMSFASALALVDISVVAAVFQATPLVITMGAALFLGE---- 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---AVTWSAYCFARKTIPVGSSEGFF 197
++ + +A + +L++ A+ T + S+
Sbjct: 117 -QVGWRRWLAICVGFAGVLLIIRPGLDSFEPAALLVVIAVLGVATRDLMTRVMDSAVPST 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + L + G L + + S
Sbjct: 176 VVSFQAFLAVIPAGLLLLAFTPGEVKAMVQNEYLMMAGGVLFGVLGYYGIVTATRVGDAS 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
V YT L I++ + + + D + +++ + + +
Sbjct: 236 AVTPFRYTRLLFSILAGILVFGERPDGLTLAGAALIIGSGLYTFVREQR 284
>gi|49477288|ref|YP_035810.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49328844|gb|AAT59490.1| transporter, Drug/Metabolite Exporter family [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKAS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L + + + LL F ++ V+ L +FL
Sbjct: 64 KQYIKQSSL----AGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ +I + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|49479889|ref|YP_034739.1| DMT family permease [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|218901614|ref|YP_002449448.1| transporter, EamA family [Bacillus cereus AH820]
gi|228925663|ref|ZP_04088751.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|49331445|gb|AAT62091.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|218540102|gb|ACK92500.1| transporter, EamA family [Bacillus cereus AH820]
gi|228833999|gb|EEM79548.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 316
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKLLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K ++ + + F + G + + + L
Sbjct: 74 MNFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|30260578|ref|NP_842955.1| EamA family protein [Bacillus anthracis str. Ames]
gi|47525684|ref|YP_017033.1| eama family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49183426|ref|YP_026678.1| EamA family protein [Bacillus anthracis str. Sterne]
gi|65317840|ref|ZP_00390799.1| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Bacillus anthracis str. A2012]
gi|165870634|ref|ZP_02215287.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167634751|ref|ZP_02393070.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|167641271|ref|ZP_02399524.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|170688971|ref|ZP_02880172.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|170707095|ref|ZP_02897551.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|177654534|ref|ZP_02936390.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190567468|ref|ZP_03020381.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227813082|ref|YP_002813091.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|228913158|ref|ZP_04076797.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229600628|ref|YP_002865025.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|254686800|ref|ZP_05150658.1| transporter, EamA family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724875|ref|ZP_05186658.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
gi|254738975|ref|ZP_05196677.1| transporter, EamA family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254744563|ref|ZP_05202242.1| transporter, EamA family protein [Bacillus anthracis str. Kruger B]
gi|254756180|ref|ZP_05208209.1| transporter, EamA family protein [Bacillus anthracis str. Vollum]
gi|254761998|ref|ZP_05213847.1| transporter, EamA family protein [Bacillus anthracis str. Australia
94]
gi|301052127|ref|YP_003790338.1| drug/metabolite transporter superfamily permease [Bacillus
anthracis CI]
gi|30253946|gb|AAP24441.1| transporter, EamA family [Bacillus anthracis str. Ames]
gi|47500832|gb|AAT29508.1| transporter, EamA family [Bacillus anthracis str. 'Ames Ancestor']
gi|49177353|gb|AAT52729.1| transporter, EamA family [Bacillus anthracis str. Sterne]
gi|164713468|gb|EDR18992.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167510779|gb|EDR86172.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|167529825|gb|EDR92573.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|170127873|gb|EDS96744.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|170667072|gb|EDT17834.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|172080646|gb|EDT65729.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190561255|gb|EDV15227.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227005849|gb|ACP15592.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|228846563|gb|EEM91576.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229265036|gb|ACQ46673.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|300374296|gb|ADK03200.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
biovar anthracis str. CI]
Length = 316
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 99/299 (33%), Gaps = 21/299 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPKEVGEQILFAGYRFFLSGVMLLFFFKLLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K +G+ + + G + + + S+F + +
Sbjct: 74 MNFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----IILAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|228940156|ref|ZP_04102727.1| Transporter, EamA [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228973048|ref|ZP_04133640.1| Transporter, EamA [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228979634|ref|ZP_04139961.1| Transporter, EamA [Bacillus thuringiensis Bt407]
gi|228780090|gb|EEM28330.1| Transporter, EamA [Bacillus thuringiensis Bt407]
gi|228786607|gb|EEM34594.1| Transporter, EamA [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228819282|gb|EEM65336.1| Transporter, EamA [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 312
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 89/293 (30%), Gaps = 17/293 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFMMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 69 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 124 KQERFSMKVQIGSIVAFVGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + VV+ F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V
Sbjct: 244 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINIMQLVGGLIIFIGLYVV 296
>gi|219850579|ref|YP_002465012.1| hypothetical protein Cagg_3740 [Chloroflexus aggregans DSM 9485]
gi|219544838|gb|ACL26576.1| protein of unknown function DUF6 transmembrane [Chloroflexus
aggregans DSM 9485]
Length = 305
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 84/283 (29%), Gaps = 14/283 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WG + L ++ L + R + + + G +L D
Sbjct: 22 LTMLLVVLIWGANFSIVKAALTEIPPLAFATLRFAGASVLLLAFTFWREGRRALPPD--- 78
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V+ F Y+L S TP +V ER+
Sbjct: 79 RATFWKLTWIGFIGNTVYQALFTYSLTLTTAANGSLIIATTPAWVALTAAVLGIERVRRT 138
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG----------SSEGF 196
+ L I ++++ G+ L + A + S
Sbjct: 139 MAMGIALAIGGVMLVVAERGLSLGGSGLLGDLLMLGAALCWMMYTLGVRTLGQGLSPLAI 198
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V +P + + + + L L + +++ ++ A
Sbjct: 199 TAWTMVTGVPGMALISIPDWERVAWDSVSFNAWFGLLYATLLALVLAYVLWNNSVRVAGS 258
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I PL+ + + ++ + V+ I +++ +++
Sbjct: 259 ARTAIYSCAIPLVATLLAWPLIGEQPTWVQGIGGLLIISGVLL 301
>gi|229916208|ref|YP_002884854.1| hypothetical protein EAT1b_0477 [Exiguobacterium sp. AT1b]
gi|229467637|gb|ACQ69409.1| protein of unknown function DUF6 transmembrane [Exiguobacterium sp.
AT1b]
Length = 287
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 81/283 (28%), Gaps = 1/283 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L +F A + L+ ++ +R+L++ + + + S + L
Sbjct: 3 YLILFAAVFFLSTSVLFVKWTS-APAETAAFYRMLFTCLMLLPFVDFKSLITTRLMTRYA 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +L F + + + A T + + + +
Sbjct: 62 LLLSGTLLAFHFWLWFLSLDYTTVASSTLFVTSSPIFVLIGNALIFKKNPTRKGLAFALV 121
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ +L+ + + + L IA A + S V +
Sbjct: 122 AVLGGMLVAAGDIQLGREALFGDLLALIAALLIAGYWLVGQHVRASMNTNTYSFSVYLVA 181
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ G +I FL +F+Y + R + V I
Sbjct: 182 TVVLCFMLLVRGTTFTAFESINWWYFLALAFFPTILGHNLFNYALARVSATVVSITILGE 241
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
L ++ + + + + +++ + ++L ++
Sbjct: 242 ALWGMLFGYAFFGERLGPFQWVGAIVLLGGIYLFLKEDARSTR 284
>gi|114320325|ref|YP_742008.1| hypothetical protein Mlg_1169 [Alkalilimnicola ehrlichii MLHE-1]
gi|114226719|gb|ABI56518.1| protein of unknown function DUF6, transmembrane [Alkalilimnicola
ehrlichii MLHE-1]
Length = 298
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/285 (9%), Positives = 77/285 (27%), Gaps = 11/285 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S G + A +L + ++ ++ R L+ L + +V
Sbjct: 1 MSDAVRRGATLIIIAELLLATMAATIKAASAELPSEMLVFFRNLFGLLLLLPLLVRGGRR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + F + + P + +
Sbjct: 61 GLATRVPHLHLLR-------GLAGVGAMYCFFWTIAHMPLAEALLVKLSAPFFLPLIAWL 113
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLL---SLAIAVTWSAYCFARKTIPVGSSE 194
+L+E L+ ++A + L + + +G + A A + +
Sbjct: 114 WLRETLSGRTVLAIAVGFLGVYFILQPNGAMQGAALQVGAVGLAGAALAALAKVTIRRMG 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V+ + + + + L+ G + + + A
Sbjct: 174 PEESSRRVVFWFGVTATTVSALPLPWVWQTPTGQTLVLLVVLGACATSAQLLLTRAFAIA 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+G Y + + + +I + + + + +V+ A ++
Sbjct: 234 PSGRLGPFTYISVVFGSLYGWWIWGELLGPMTLLGMALVIGAGLL 278
>gi|212639250|ref|YP_002315770.1| drug/metabolite transporter (DMT) superfamily permease
[Anoxybacillus flavithermus WK1]
gi|212560730|gb|ACJ33785.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Anoxybacillus flavithermus WK1]
Length = 297
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 96/298 (32%), Gaps = 8/298 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + + P++ + + V +L+ + + L
Sbjct: 2 WKGYGLILLSATGFAFIPIFALYAYESGVTVTT---LLFLRFALAALFFFLYLWLKEKNW 58
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + + + F+ ++ L + ++ P+ +E+L
Sbjct: 59 KVSRSHLLYLFLLGGIFYMMQSSFYFQSVKYIPSSLAALLLYLNPIFVAIFSFFINQEKL 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG-----SSEGFFI 198
IIA L+ L +L++ + L IA+ A I VG
Sbjct: 119 TKHIIIAILISFLGMLLVLGAPEGKIQPLGIALAVGAAIVYSIYIIVGNQVTAHVPPITA 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ AL + V+ SG HF + + + F G+ +
Sbjct: 179 SAYIALFAALSFFVFGIGSGTLHFQFDAKGWLPIIGTSFVSSVLAMLTFFAGMNIIGPTK 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
I+ P++ + S+ L + I +++ I IV+ ++ + + K T S
Sbjct: 239 AAILSMIEPIVTFLLSMVFLHESISSIQMIGGLIVLSGAMLVVTTKELKPKKKSTSIS 296
>gi|281201488|gb|EFA75697.1| hypothetical protein PPL_10750 [Polysphondylium pallidum PN500]
Length = 407
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/256 (10%), Positives = 76/256 (29%), Gaps = 16/256 (6%)
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ + +L ++++ F+ L + + P+
Sbjct: 8 WWARFKRSLTVPSFKTIKVHLVLLSVGIMAVSINQSLFLEGLELSTASNAAITQPAIPIF 67
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMT----------------LHSGIPLLSLAI 174
S L + ER L+ + + ++ +M L + L +
Sbjct: 68 STLLSVILGFERKTKLKFVGIAVSVIGACLMIDLTQLAHGTSSGKNLLLGNLCFLGNTLA 127
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
+ + + +IP + E + + L
Sbjct: 128 YSGFLLLQRPLQEAGFSPVKIMAWAFTFGSIPVFALSLGVVKDLSEFRNVSITNWLVLLY 187
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
L ++ F S+ ++ + +TV + PLL V + +L + + + + +V+
Sbjct: 188 TAILATAYTFWASSWAVQNSDATTVAVYLCVEPLLTAVMAAIVLHERLTPLNIVGAFVVL 247
Query: 295 IAMVVYLLPTVINSGK 310
+ + + ++ K
Sbjct: 248 VGVAMVMISKHREKQK 263
>gi|13471009|ref|NP_102578.1| hypothetical protein mlr0868 [Mesorhizobium loti MAFF303099]
gi|14021752|dbj|BAB48364.1| mlr0868 [Mesorhizobium loti MAFF303099]
Length = 293
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 94/273 (34%), Gaps = 7/273 (2%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ + + + + +++V +V+ R + + ++ G ++
Sbjct: 12 FWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSGGFAAMRTQRPL 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
A ++ +S ++YAL + F TP+ + L FL ERL+
Sbjct: 72 AHIARNVVHYSG------QAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGERLSRP 125
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ A L ++ ++++ + + V +A CF + V S + ++
Sbjct: 126 KLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAVCFGISLVLVKSLTRTDSVVRIIFWM 185
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ + ++ +++ + + A + + M++
Sbjct: 186 LIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISPMDFLR 245
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
L + + + ID ++++ ++
Sbjct: 246 VPLSALVGWLLYHEQIDAFTAGGALLILMGNLL 278
Score = 37.2 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 32/69 (46%)
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+++ + Y + L+ + +E+T P+ + +V L + + + G+ +I
Sbjct: 77 NVVHYSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGERLSRPKLAAVGLGLIG 136
Query: 297 MVVYLLPTV 305
+VV + P V
Sbjct: 137 VVVIVRPGV 145
>gi|197337119|ref|YP_002158718.1| transporter, drug/metabolite exporter family [Vibrio fischeri MJ11]
gi|197314371|gb|ACH63820.1| transporter, drug/metabolite exporter family [Vibrio fischeri MJ11]
Length = 291
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 79/289 (27%), Gaps = 1/289 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+ L +F LWG + L+ + + +I RV ++ + + L +
Sbjct: 1 MINILSLFTLAALWGGSFLFVRIAANPLGPAVLIEVRVAFAALTLLVVSFFLKKSLRFMS 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +L + + T+ + + +
Sbjct: 61 NIKHFLILGLFNSALPFLLFAYSAQVLNVSTLAILNSTAPIWGAVIGAVWTRTGLSKQVI 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +++ + + + +A +Y A S F
Sbjct: 121 FGLILGMIGVSVLVGWEAINIGDEAVIPIIAALTGAFSYGVATNYAKNAPSVEPFNNAHG 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
++ V+ + + + + ++ IK S+ +
Sbjct: 181 SMWASVLLVLPLVPFMPAREEVTSDIIAAVFALGAVCTGLAYLLYFRLIKELGASSALTV 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P+ I+ L + + I +VVI + K
Sbjct: 241 TFIIPVFGILWGYLFLGETVGINAIIGTILVVIGTMFVTGFAAKFMSKK 289
>gi|163760206|ref|ZP_02167289.1| hypothetical protein HPDFL43_08089 [Hoeflea phototrophica DFL-43]
gi|162282605|gb|EDQ32893.1| hypothetical protein HPDFL43_08089 [Hoeflea phototrophica DFL-43]
Length = 314
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/300 (10%), Positives = 84/300 (28%), Gaps = 18/300 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ + + + + + ++ + + +V+ + R + + +
Sbjct: 10 SSGASRFVPLVVMILTPLFFSTNLIFGRTTIPEVAPFTLAFLRWTAASLALAPFVWVARH 69
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + + YAL + Y +P++ + L
Sbjct: 70 HVRAYLTSSPRHWLLL----GFLGMWICGAGVYYALQFTTATNATLIYTTSPLMVILLER 125
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI-------------PLLSLAIAVTWSAYCF 183
+F ++ + + I+ L + ++ A++ +
Sbjct: 126 LFFARATGWRELAGIAIGFFGVAIIVLQGDLDRLAGLDLNRGDLMFIAAALSWAVYSVLL 185
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
F + + L + G +
Sbjct: 186 KGPRTSAMPVSALFGAITIAGALLLAPFALWEWMSGARMPSTVSAWGGIAGIVVFSSLLA 245
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F + YG+ R ST I Y P+ + +V +L +P + V+ +V+ P
Sbjct: 246 FGGYQYGVARLGASTTSIFMYLLPVYGVGLAVLVLGEPFHAHHMVGILTVLGGLVLATAP 305
>gi|46581355|ref|YP_012163.1| hypothetical protein DVU2952 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601466|ref|YP_965866.1| hypothetical protein Dvul_0416 [Desulfovibrio vulgaris DP4]
gi|46450777|gb|AAS97423.1| membrane protein, putative [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561695|gb|ABM27439.1| protein of unknown function DUF6, transmembrane [Desulfovibrio
vulgaris DP4]
gi|311235015|gb|ADP87869.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
vulgaris RCH1]
Length = 345
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/312 (8%), Positives = 84/312 (26%), Gaps = 27/312 (8%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYF 74
N + G + + ++ T + +F+ + +++ R + + + +++
Sbjct: 10 NTAQSGARGYVIALVSAVIMSFTGILIRFISVEYALPPVQLAFWRNFFVVATLLPVLLWR 69
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV--ISV 132
+ L + + + + + I + T T Y I
Sbjct: 70 GIPIGLR----SWRDRWLLAGYGLLLAVFNMDWTIAIVETGAAVATVLVYCSAAYTGIFG 125
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+L L + L+ + + + +L + ++ +G
Sbjct: 126 WLLLGEALTLPLMLTVAGCLVGCAMVCGVADPGAWNMSTLGLVTGIASGLLYAAYSMLGR 185
Query: 193 SEGFFIEMCVLAIPALFYVVWNG------------------FSGGEHFFLGNIPDTLFLI 234
+ + +F +G + I
Sbjct: 186 VAARRGIDAWVTLLHIFAYAAVFQAVANLLLAAYAPGLGLGAAGFVGSGMAPGCWLALFI 245
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
F +++ + + + P+L V + L + + T++ ++V
Sbjct: 246 LAAGPTLLGFGLYNVSLGLLPVVVANTILLLEPVLTAVIADAWLGEKLTTMQWAGALLIV 305
Query: 295 IAMVVYLLPTVI 306
+ + L
Sbjct: 306 SGVGLLRLIPSR 317
>gi|89068515|ref|ZP_01155912.1| possible transporter, RarD family, DMT superfamily protein
[Oceanicola granulosus HTCC2516]
gi|89045934|gb|EAR51994.1| possible transporter, RarD family, DMT superfamily protein
[Oceanicola granulosus HTCC2516]
Length = 328
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 97/306 (31%), Gaps = 16/306 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S + + G + + + + + V V ++ + R L + +
Sbjct: 19 SDSPPADRILAGVALMLGFCVTAPMLDVAAKLASDSVPVGQITTARFLVQCMLMAPFVRV 78
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + ++ A +L V FI A+ FV P I +
Sbjct: 79 MRLSLRVPREQWLALTVR------AVLLFVSTFCFIAAIRVMPLADALAIVFVAPFIVLL 132
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G +L E + ++ AA++ L +L + S ++A+ +A FA +
Sbjct: 133 VGKFYLSEDVGPRRVCAAIVGFLGVLFVIQPSFAAFGAVALFPLGTAMGFAFYILVTRRL 192
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGE---------HFFLGNIPDTLFLIGYGLLNSFVF 244
+ + L V L+L G G +
Sbjct: 193 SRRMHPVTLQFHTGLIASVLCLPVMILAEGTGADLLDPVWPKGIAWLWLFGVGFFAAISH 252
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +Y + A +T+ ++Y + + + + + + I++ A + +
Sbjct: 253 MMMTYALSLAPSATLAPLQYLELPVATLLGYLVFRDFPNALSLTGIAIIIGAGLYMIHRE 312
Query: 305 VINSGK 310
+ + +
Sbjct: 313 RVIARQ 318
>gi|293604482|ref|ZP_06686887.1| DMT superfamily drug/metabolite transporter [Achromobacter
piechaudii ATCC 43553]
gi|292817063|gb|EFF76139.1| DMT superfamily drug/metabolite transporter [Achromobacter
piechaudii ATCC 43553]
Length = 313
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 91/270 (33%), Gaps = 8/270 (2%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A +L+G+T ++ + + Q S + R ++++ + F+ + P +
Sbjct: 30 IAAVLFGLTGVFGELI-QASAAVITLGRAVFAVISLG----AFARMRGKPLLGVLTPAQL 84
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+LV + +LA HW F ++ + + + P + +ER+ + +
Sbjct: 85 FVLVLAGALLAAHWVTFFISVKVGGIAIATLGFASFPAFITLFEGLLFRERIRAAEWMLL 144
Query: 152 LLIILSLLIMTLHSG---IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L+ L+++T + L + S+ G +
Sbjct: 145 GLVTAGLILVTPSFNLADQGTIGLVWGLLSGLTFALLALSNRRSASGMDPMQVACWQNVV 204
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+V F+ G+ L + + +F + R T G++ P+
Sbjct: 205 VALVMVPFAVGQLPALAAVDWMWLALLGVFCTGLSHYLFVSSLTRLNARTAGLVIALEPV 264
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I + + Q ++V A+V
Sbjct: 265 YAIAFAWALFSQQPTPRMIAGAALIVAAIV 294
>gi|229591957|ref|YP_002874076.1| hypothetical protein PFLU4549 [Pseudomonas fluorescens SBW25]
gi|229363823|emb|CAY51266.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 95/297 (31%), Gaps = 21/297 (7%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ +WG + L+ + + ++ L RV + G+ +
Sbjct: 7 LYLLGLAAIWGASFLFMRIIAPEIGTLPTAFFRVSIAAAGLLVILAAMRVKWDF------ 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K +L+ + + A ++ TP++ V +G +F ERL
Sbjct: 61 QGKFKTVLLLGVINSGIPATMYSVAAQVLPAGYSAIFNATTPLMGVLIGGLFFSERLTPS 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLL--------------SLAIAVTWSAYCFARKTIPVGS 192
++ L +L + ++T + + + A + + + S
Sbjct: 121 KVAGVCLGLLGVGVLTRAGPVAFDLELLMGALACLLATTCYGFAGFLARRWLDQRGGLDS 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
M + L + ++ S + G L + +F + ++ +
Sbjct: 181 RLSALGSMLGATLFLLPFFAYSAVSQPPASWGGWQVWLSLLGLGLVCTAFAYILYFRLLT 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + P ++ +L +P+ ++ A+ + L P +++
Sbjct: 241 AIGPVKSMTVTFMIPPFGVLWGALLLDEPLSMAHLYGGVLIAGALWLVLRPKKLSAR 297
>gi|332560134|ref|ZP_08414456.1| hypothetical protein RSWS8N_13775 [Rhodobacter sphaeroides WS8N]
gi|332277846|gb|EGJ23161.1| hypothetical protein RSWS8N_13775 [Rhodobacter sphaeroides WS8N]
Length = 308
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 88/296 (29%), Gaps = 7/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + A + + + + Q + + + I+ R L SLP + G
Sbjct: 4 SDNLRGALAMTVAMAAFTVNDALMKAVTQTMPLFQAIALRGLVSLPLLCIYGWAVGGLRF 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + G+L A + ++ AL+ P+ ++ L
Sbjct: 64 RIP-----RRDGGLLALRAGADVLSTVAYLSALMVLPLANLVAILQSVPLAVTLAAALVL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-FFI 198
KE L + A L+ +L++ ++ + C + +
Sbjct: 119 KEPLGWRRFSAILIGFCGVLLIVRPGAEGFSLWSLVGLAAVGCVVARDLATRRIGSDLPA 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L ++ S F + L+L G + + ++ ++
Sbjct: 179 ATIALWTSGAVTLLGLAGSLPSGFEPVTGGEALYLGGAAVALMVGYLSIVLAMRGGDIAA 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V YTA L I + D + + F ++ + + +
Sbjct: 239 VSPFRYTALLWAIALGWLLFGDLPDGLAFLGFAVITATGLFTIWREARLRRLPREA 294
>gi|307720348|ref|YP_003891488.1| hypothetical protein Saut_0427 [Sulfurimonas autotrophica DSM
16294]
gi|306978441|gb|ADN08476.1| protein of unknown function DUF6 transmembrane [Sulfurimonas
autotrophica DSM 16294]
Length = 294
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 86/293 (29%), Gaps = 25/293 (8%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G LF+ + ++ + T+ L +S LE++ R + +F+A+
Sbjct: 7 GVLFMLGSALISALNGALTKILSEDISALEIVFFRNFIGVFIIFYAL--------KHTAP 58
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ ML + F Y + +P L E LN
Sbjct: 59 KLTGGKIHMLFTRGLFGFMAMILFFYTITVIPLGEAITLNKTSPFFVTLFAYFLLHEHLN 118
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS------------ 192
+ A L+ L ++++ G+ + A +
Sbjct: 119 RRTLFALLIGFLGVVLIVKPFGMSFSYAHFLGILGGFFAAAAYTTIKKIKDIYDSRVIVL 178
Query: 193 ----SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ L P + F + + L +I +++ + +
Sbjct: 179 SFVGMGTLLPALLFLTAPFIHAPASLEFLFPKFILPNTLHVWLLIILMAFISTLSQWLLT 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ LS VG++ YT I + DT+ + +V+ ++
Sbjct: 239 KAYSASNLSIVGVVSYTNIPFAIGFGTLLGDNFPDTLTFLGILFIVLGGILVS 291
>gi|301324938|ref|ZP_07218497.1| integral membrane protein DUF6 [Escherichia coli MS 78-1]
gi|300848189|gb|EFK75949.1| integral membrane protein DUF6 [Escherichia coli MS 78-1]
Length = 317
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 35 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 87
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 88 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 147
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 148 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 207
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 208 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 267
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 268 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 305
>gi|260426557|ref|ZP_05780536.1| permeases of the drug/metabolite transporter [Citreicella sp. SE45]
gi|260421049|gb|EEX14300.1| permeases of the drug/metabolite transporter [Citreicella sp. SE45]
Length = 293
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 93/289 (32%), Gaps = 9/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T+ L++ A + + + + + + E++ +R L + V +
Sbjct: 2 SQTLKAVLWMSGAIVSFTTMAVAGREVSLDLDTFEIMLYRSLIGVVIVVTLLTATGQTGQ 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L A + F+ L + +A+ F +P+ + L L
Sbjct: 62 VTRRRLGLHLARNLCHFAGQNL------WFFAVAAIPIAQVFALEFTSPLWVIVLSPFVL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+L + +AA+L + +L++ S + IA +A FA +
Sbjct: 116 GEKLTPTRALAAVLGFVGILVVARPSPETINPGLIAAALAAIGFAGSAVTTRRLTRTETT 175
Query: 200 MCVLAIPALF--YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+C+L + +++ + + + A
Sbjct: 176 VCILFWLTIMQSVFGLVCAGIDGDIAFPAATSWPWVLLIAIAGLVAHYCLTTALSLAPAP 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
V +++ + + + + ++ +D I I+ A +L
Sbjct: 236 VVMPIDFARLPVAALVGIILYQEALDPYVFIGAAIIFGANYFNILHETR 284
>gi|288932825|ref|YP_003436885.1| hypothetical protein Ferp_2503 [Ferroglobus placidus DSM 10642]
gi|288895073|gb|ADC66610.1| protein of unknown function DUF6 transmembrane [Ferroglobus
placidus DSM 10642]
Length = 273
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/275 (9%), Positives = 83/275 (30%), Gaps = 11/275 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + W + ++ + + ++ + +R + + + K L
Sbjct: 5 YFLLLSVMVFWAGSFIFIKLAISDINPASLTLYRFSLATIFLVPFV----------KKML 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A+ +V + +++ + AL S + + + L +
Sbjct: 55 DFKDALRFVVLGVSGVSLLYILQFSALYYTTPTNASILINTSVLFIAAMSKERLSSKQKA 114
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+++ L I+L L + + I + P+ F + +
Sbjct: 115 GIVLSFLGIVLILFKRDFALSLIGDLMVIGNGILWAIYTVYAKPLFEKYSSFEIVFYSFL 174
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ +V + + L + + ++ Y +++ + + Y
Sbjct: 175 FGIVTLVPFFSIFPLELPSKTLTWISVVYLAILCSVVGYVVWYYCVEKIGAARTSVFVYL 234
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
PLL V S F+ + + + ++ + +
Sbjct: 235 IPLLTAVMSYFVFSEEFTARKIFGGFLTILGIYLV 269
>gi|228901572|ref|ZP_04065752.1| Transporter, EamA [Bacillus thuringiensis IBL 4222]
gi|228858063|gb|EEN02543.1| Transporter, EamA [Bacillus thuringiensis IBL 4222]
Length = 309
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 92/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++V A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVVVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIIFATIFGLSMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|229042311|ref|ZP_04190062.1| Transporter, EamA [Bacillus cereus AH676]
gi|228727031|gb|EEL78237.1| Transporter, EamA [Bacillus cereus AH676]
Length = 316
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYVELGIQPQEVGEQILFAGYRFFLSGFMLLLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNMRKIIGVSIGFCGVVLVNMPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ + LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMMFGSIGLLCIGALQVGLMPFTFSLHALIMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
>gi|229011008|ref|ZP_04168202.1| Transporter, EamA [Bacillus mycoides DSM 2048]
gi|229166531|ref|ZP_04294284.1| Transporter, EamA [Bacillus cereus AH621]
gi|228616935|gb|EEK74007.1| Transporter, EamA [Bacillus cereus AH621]
gi|228750180|gb|EEM00012.1| Transporter, EamA [Bacillus mycoides DSM 2048]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 89/292 (30%), Gaps = 15/292 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T + Q + V R L++ + F + FS S
Sbjct: 11 LALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKRASKQDI--- 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ + L + + + LL F ++ V+ L +FLK++
Sbjct: 68 -KQSSFAGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLKQKATIF 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IPVGSSEGF 196
++ + L ++T L I V A FA P+ S
Sbjct: 127 IVMGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISPLLLSTSQ 186
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + + F + + S F I + K
Sbjct: 187 VLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTSLFATSIAFFIQTSAQKHTSP 246
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 247 TRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|50083414|ref|YP_044924.1| hypothetical protein ACIAD0125 [Acinetobacter sp. ADP1]
gi|49529390|emb|CAG67102.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter sp. ADP1]
Length = 294
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + L+ I + +F V ++ R L +
Sbjct: 14 KALLCLMMSAFLFSIMGVCIRFASHSVDNATIVFFRNAVGLFIFIPMLF-------KQGL 66
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 67 GFVKTNKLWMHTWRSIVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 126
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I+AA++ ++ +L + L L+ S + A + V + ++
Sbjct: 127 TPTMILAAMVGLIGVLFVAKPDEGLLNILSFIGLGSCFLSAMAFVTVRALTTTEPPERIV 186
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + L GLL + SY A +G M
Sbjct: 187 FYFCVFGTLISAIPMFWHWRSFSWHELTLLAAAGLLANISQLFMSYAYSLAPAGQIGPMN 246
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 247 YIAIVFAGIWGFIFWHELPDFFTLIGITIILFAILL 282
>gi|157155559|ref|YP_001465143.1| carboxylate/amino acid/amine transporter [Escherichia coli E24377A]
gi|191165843|ref|ZP_03027681.1| carboxylate/amino acid/amine transporter [Escherichia coli B7A]
gi|193063819|ref|ZP_03044906.1| carboxylate/amino acid/amine transporter [Escherichia coli E22]
gi|194428120|ref|ZP_03060664.1| carboxylate/amino acid/amine transporter [Escherichia coli B171]
gi|194431138|ref|ZP_03063431.1| carboxylate/amino acid/amine transporter [Shigella dysenteriae
1012]
gi|194435768|ref|ZP_03067871.1| carboxylate/amino acid/amine transporter [Escherichia coli 101-1]
gi|209921134|ref|YP_002295218.1| putative transport protein [Escherichia coli SE11]
gi|218697381|ref|YP_002405048.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|253771479|ref|YP_003034310.1| carboxylate/amino acid/amine transporter [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163612|ref|YP_003046720.1| putative inner membrane protein [Escherichia coli B str. REL606]
gi|256021324|ref|ZP_05435189.1| predicted inner membrane protein [Shigella sp. D9]
gi|260846555|ref|YP_003224333.1| putative inner membrane protein [Escherichia coli O103:H2 str.
12009]
gi|293463984|ref|ZP_06664398.1| inner membrane transporter yicL [Escherichia coli B088]
gi|300815099|ref|ZP_07095324.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
107-1]
gi|300822431|ref|ZP_07102571.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
119-7]
gi|300903071|ref|ZP_07121011.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 84-1]
gi|300917520|ref|ZP_07134178.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
115-1]
gi|300925475|ref|ZP_07141353.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
182-1]
gi|300932280|ref|ZP_07147552.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
187-1]
gi|301307277|ref|ZP_07213293.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
124-1]
gi|301325347|ref|ZP_07218852.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 78-1]
gi|307313271|ref|ZP_07592896.1| carboxylate/amino acid/amine transporter [Escherichia coli W]
gi|331670502|ref|ZP_08371341.1| putative permease transporter [Escherichia coli TA271]
gi|332282556|ref|ZP_08394969.1| transporter YicL [Shigella sp. D9]
gi|14252942|emb|CAC39297.1| hypothetical protein [Escherichia coli]
gi|157077589|gb|ABV17297.1| carboxylate/amino acid/amine transporter [Escherichia coli E24377A]
gi|190904167|gb|EDV63878.1| carboxylate/amino acid/amine transporter [Escherichia coli B7A]
gi|192930534|gb|EDV83141.1| carboxylate/amino acid/amine transporter [Escherichia coli E22]
gi|194413878|gb|EDX30156.1| carboxylate/amino acid/amine transporter [Escherichia coli B171]
gi|194420593|gb|EDX36669.1| carboxylate/amino acid/amine transporter [Shigella dysenteriae
1012]
gi|194425311|gb|EDX41295.1| carboxylate/amino acid/amine transporter [Escherichia coli 101-1]
gi|209914393|dbj|BAG79467.1| putative transport protein [Escherichia coli SE11]
gi|218354113|emb|CAV00680.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|242379198|emb|CAQ34002.1| inhibitor of heme biosynthesis [Escherichia coli BL21(DE3)]
gi|253322523|gb|ACT27125.1| carboxylate/amino acid/amine transporter [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975513|gb|ACT41184.1| predicted inner membrane protein [Escherichia coli B str. REL606]
gi|253979669|gb|ACT45339.1| predicted inner membrane protein [Escherichia coli BL21(DE3)]
gi|257761702|dbj|BAI33199.1| predicted inner membrane protein [Escherichia coli O103:H2 str.
12009]
gi|291321616|gb|EFE61052.1| inner membrane transporter yicL [Escherichia coli B088]
gi|300404902|gb|EFJ88440.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 84-1]
gi|300415256|gb|EFJ98566.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
115-1]
gi|300418403|gb|EFK01714.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
182-1]
gi|300459967|gb|EFK23460.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
187-1]
gi|300525078|gb|EFK46147.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
119-7]
gi|300531991|gb|EFK53053.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
107-1]
gi|300837535|gb|EFK65295.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
124-1]
gi|300847806|gb|EFK75566.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 78-1]
gi|306906954|gb|EFN37463.1| carboxylate/amino acid/amine transporter [Escherichia coli W]
gi|315062966|gb|ADT77293.1| predicted inner membrane protein [Escherichia coli W]
gi|315254656|gb|EFU34624.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 85-1]
gi|320179999|gb|EFW54941.1| hypothetical protein SGB_02795 [Shigella boydii ATCC 9905]
gi|320201313|gb|EFW75894.1| hypothetical protein ECoL_01346 [Escherichia coli EC4100B]
gi|323160897|gb|EFZ46821.1| carboxylate/Amino Acid/Amine Transporter family protein
[Escherichia coli E128010]
gi|323376440|gb|ADX48708.1| carboxylate/amino acid/amine transporter [Escherichia coli KO11]
gi|323939156|gb|EGB35370.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli E482]
gi|323959725|gb|EGB55375.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli H489]
gi|323971137|gb|EGB66383.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli TA007]
gi|324019700|gb|EGB88919.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
117-3]
gi|324115989|gb|EGC09915.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli E1167]
gi|331062564|gb|EGI34484.1| putative permease transporter [Escherichia coli TA271]
gi|332104908|gb|EGJ08254.1| transporter YicL [Shigella sp. D9]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|254427455|ref|ZP_05041162.1| Integral membrane protein DUF6 [Alcanivorax sp. DG881]
gi|196193624|gb|EDX88583.1| Integral membrane protein DUF6 [Alcanivorax sp. DG881]
Length = 296
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 104/298 (34%), Gaps = 14/298 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T + T+ V A + WG++ L E V V +R L V +
Sbjct: 2 TRISTILVILAALCWGLSGGIGSMLMEEGWGVFLVAFYRGAIGLLFVLAWL-----CCRP 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L L + + G V + +A ++ F+ ++ + + + PV L
Sbjct: 57 LNHGLGDRRLWGWSVVAGLGVAGNFAFYFLSISHGGVAVAATLMYSAPVFVYLLSFALRL 116
Query: 141 ERLNHLQIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
ER + ++ A ++++L ++++T + + + F
Sbjct: 117 ERPSTVKWAAIMVVMLGIVLLTRIHNVDDAGVTVLGVVAGLLSGLCYAVFIFGFKYAAPH 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + +VW +G + LF L F ++ G+
Sbjct: 177 GSPQAILSIAFSVLVVVLVWPAQTGEVMAAARSAEWPLFACLGVLGAGLSFVLYVIGLNY 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ I+ P+ + V +L++ + + + G++++A+ L + ++ +
Sbjct: 237 TAPAVASIVAMVEPVTASLFGVVVLQEALVASQVLGMGLILVAVTGLSLYSASDALRR 294
>gi|124486490|ref|YP_001031106.1| hypothetical protein Mlab_1678 [Methanocorpusculum labreanum Z]
gi|124364031|gb|ABN07839.1| protein of unknown function DUF6, transmembrane [Methanocorpusculum
labreanum Z]
Length = 355
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 82/280 (29%), Gaps = 4/280 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ F A +L+GI+ ++ LE S + + L + G+F + K
Sbjct: 7 RLAIGFAILAALLYGISAPVSKILLETTSPELMAALLYLGAGIGMFAVNLATQRRSRERK 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + K + ++ + + L S V + + + +E
Sbjct: 67 EAPLSKKDLPFVIGMIVLDIAAPILLMLGLSLTTAANASLLNNFEIVTTALVALLLFREA 126
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLS---LAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ IA LLI+ +++T+ + + S ++
Sbjct: 127 IDRRLWIAILLIVAGSVLLTVDDLSSFSFSAGSILVILACVCWGVENNCTRMLSLKDPMQ 186
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ V+ + L+ ++ + +
Sbjct: 187 IVVVKGFGAGSGALLIAFLASGMQTDLVSVIAALVLGFFAYGLSIYLYVRAQRDLGAART 246
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
AP + S + + P+ + + G++V+
Sbjct: 247 SAFYAVAPFIGAAISFAVFQTPLTPLFALAAGLMVLGAYF 286
Score = 42.2 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 32/82 (39%)
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ D F+IG +L+ + G+ + ++ + + ++ + ++ ID
Sbjct: 69 PLSKKDLPFVIGMIVLDIAAPILLMLGLSLTTAANASLLNNFEIVTTALVALLLFREAID 128
Query: 284 TVRTIVFGIVVIAMVVYLLPTV 305
I ++V V+ + +
Sbjct: 129 RRLWIAILLIVAGSVLLTVDDL 150
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 52/198 (26%), Gaps = 6/198 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G++ V A + WG+ T+ L ++++ + + G SG + L +
Sbjct: 158 GSILVILACVCWGVENNCTRMLSLKDPMQIVVVKGFGAGSGALLIAFLASGMQTDLVSVI 217
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L V + TS Y V P I + + L
Sbjct: 218 AALVLGFFAYGLSIYLYVRAQRDL------GAARTSAFYAVAPFIGAAISFAVFQTPLTP 271
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L +AA L++L + + + F E
Sbjct: 272 LFALAAGLMVLGAYFAAKGGHMHKHIHESVMHDHRHGHEDGHHTHVHEPPVFEEHTHEHT 331
Query: 206 PALFYVVWNGFSGGEHFF 223
+ H
Sbjct: 332 HERLEHDHPHGADMHHVH 349
>gi|120556709|ref|YP_961060.1| hypothetical protein Maqu_3804 [Marinobacter aquaeolei VT8]
gi|120326558|gb|ABM20873.1| protein of unknown function DUF6, transmembrane [Marinobacter
aquaeolei VT8]
Length = 331
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 87/289 (30%), Gaps = 18/289 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
L+ + + + + + W + + +E + L + R + +L +
Sbjct: 13 LNATTQNSGQTLAYIGLVLTPLFWAGNAVVARGTVEHIPPLSMSLWRWVLALAIILP--- 69
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F + + M+ + +A A +T + P+
Sbjct: 70 -FGLPGIWRHRQVIRQRLGSMIALATFSVAAFNSLLYVAAMTTTATNIALINATIPIFVA 128
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMT-------------LHSGIPLLSLAIAVTWS 179
L + L +R +QI+ + + +L + + +++ +
Sbjct: 129 LLAWLLLGDRTRPIQILGIAMALAGILCVIARGDVSVLTGLQAQPGDLVMVAAVFSWGLF 188
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
+ R+ +P+ + ++ + + + + F L +
Sbjct: 189 SVLLRRQAVPLPALTFLTTQILLGTLILAPVYLVDFLFFSGGFALSQSTALPLIYFAIFP 248
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ +++G+ + I Y P+ V +V L + + +
Sbjct: 249 GILAYAFWNHGVHSIGPARAAIFMYLTPVYASVLAVVFLGENLSLFHLV 297
>gi|321313922|ref|YP_004206209.1| putative efflux transporter [Bacillus subtilis BSn5]
gi|320020196|gb|ADV95182.1| putative efflux transporter [Bacillus subtilis BSn5]
Length = 312
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/310 (10%), Positives = 79/310 (25%), Gaps = 18/310 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYF 74
++ GT+F+ + + ++ ++ Q+ V+ +R L ++P + + +
Sbjct: 6 QSKIREAAAGTIFLLIGTVCFASKSIWIKWAYQMGAEPDAVLLYRQLLAVPLFWLIFLIY 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ K K + L + P+
Sbjct: 66 RPPMPDGK---KKGDLWKACGAGVFCFFLSPLLDFIGLNHVSAMVERILLMSYPLFVFGF 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ + + A L ++ L + L + +
Sbjct: 123 AACRDRKMSSIQDLFAVLAVMFGLFLALGGWNAELFQANMIGAVFILLSSAVYAGYLVLS 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGG-------------EHFFLGNIPDTLFLIGYGLLNS 241
G + + + G + LF + +
Sbjct: 183 GHLVHQIGGIRLNAYGMTAAGAAMMLYTGIKSAAGMNTPMAAYPLSMYGLFAVIAVVTTV 242
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F + GI+R + P+L I L + + ++ I V +
Sbjct: 243 IPFVLMLEGIRRIGAQRAAAISMAGPVLTIFYGALFLGERLGLIQVIGCAAVFFVITGME 302
Query: 302 LPTVINSGKN 311
+ K
Sbjct: 303 YRKLKTGKKE 312
>gi|302382207|ref|YP_003818030.1| hypothetical protein Bresu_1095 [Brevundimonas subvibrioides ATCC
15264]
gi|302192835|gb|ADL00407.1| protein of unknown function DUF6 transmembrane [Brevundimonas
subvibrioides ATCC 15264]
Length = 300
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 97/298 (32%), Gaps = 16/298 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P ++ L V + + G+ P+ + L + R ++LP + +
Sbjct: 2 TPPAPRLIPLLVVLASASILGLAPILVR-LTETGPAAAGFWRFAFALPLLALIL------ 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ ++ + A+ F+ Y ++ + +TPV+ +G +
Sbjct: 55 --SRPGGEGVARPSKWMLLAGLFFALDLSFWHYGIVMTSVANATVLCNLTPVVVTLIGWL 112
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPV 190
F KE+ L ++A L + M + + + V++ +
Sbjct: 113 FFKEKPARLFLLALALAMAGAFAMAAAAKGGQGTNPILGDLLSLTVSFWYAGYFLMVKLA 172
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ G + L + GE + GL++ ++
Sbjct: 173 RTTAGALWVTFWATLAGLPLMGGVALLLGEDMIPATAAGWAACVAMGLMHVAGQGGVAWA 232
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ R S + PL+ S + + + ++ + +V+ A+V+ + +
Sbjct: 233 LGRLPASITAVTILIQPLVAAGLSWLVFGETLAPIQALGGALVLCAIVLAQWSSRTKT 290
>gi|261251792|ref|ZP_05944366.1| permease [Vibrio orientalis CIP 102891]
gi|260938665|gb|EEX94653.1| permease [Vibrio orientalis CIP 102891]
Length = 301
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/279 (12%), Positives = 82/279 (29%), Gaps = 8/279 (2%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG + T+ L SVL IS R + + ++ L K
Sbjct: 21 LLLLVAVFWGTSYGLTKSALVYTSVLVFISIRFSITFLCMLPVVI--RDFRRGLNKDWKI 78
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF---LGSVFLKERLN 144
G ++ + V A S + + + + L
Sbjct: 79 AIPTGFILSAIFFCEVFGVSQTSASNAAFLISLSVILTAFAELIINKKRVSNTLWMLTLC 138
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + L + + +L+ A+ R T + + L
Sbjct: 139 SVMGVLLLTSNEGIELSLNTGDYFILTAALLRALMVTLTKRFTEGKEITTSTLTSLQSLV 198
Query: 205 IPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + V + F F + +Y ++R + V ++
Sbjct: 199 VACVAIVCAVTYLPATEFVIPTSTEFWITVAYLVLFCTLFAFYVQNYAVRRTSPTRVSLL 258
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ PL + ++ L++ + V+ +++ +++V
Sbjct: 259 MGSEPLFGAIFAMVWLQESLSVVQVAGGALILFSVIVTS 297
>gi|259418580|ref|ZP_05742497.1| possible transporter, RhaT family, DMT superfamily [Silicibacter
sp. TrichCH4B]
gi|259344802|gb|EEW56656.1| possible transporter, RhaT family, DMT superfamily [Silicibacter
sp. TrichCH4B]
Length = 335
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 85/287 (29%), Gaps = 8/287 (2%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI 71
+ +K+ + + G + + A + + I L+ + L + I + VFF
Sbjct: 30 RAFAKDARPMDNVKGIVLLLIAMVGFTIEDLFIKQLSGSLAVGQILLFIGLGAGVVFFVA 89
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ +D + + L ++ + + + +T +
Sbjct: 90 LRLQKQSLWSRDAWQPMPVLRALAEGGAAMSFATALALVDISVVAAVFQATPLAITMGAA 149
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+FLG ++ + A + + +LI+ A+ V S C A + +
Sbjct: 150 LFLGE-----QVGWRRWSAIFVGFIGVLIIIRPGLAGFEPNALLVLVSVLCVAARDLMTR 204
Query: 192 SSE---GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + L G + +
Sbjct: 205 RMPASIPSSVVSVQAYLAVVVAGGAMLLFTPQTMVAPTSFEWGMLAGGTIFGVVAYHGIV 264
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ A + + Y+ + ++ + + D + + +++
Sbjct: 265 TATRIADAAVITPFRYSRLVFSMIGGAIVFSERPDAMTLLGSALIIA 311
>gi|228908812|ref|ZP_04072644.1| Transporter, EamA [Bacillus thuringiensis IBL 200]
gi|228850822|gb|EEM95644.1| Transporter, EamA [Bacillus thuringiensis IBL 200]
Length = 309
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 90/293 (30%), Gaps = 17/293 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + VV+ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVV 293
>gi|228938807|ref|ZP_04101407.1| Transporter, EamA [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228971688|ref|ZP_04132309.1| Transporter, EamA [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228978297|ref|ZP_04138674.1| Transporter, EamA [Bacillus thuringiensis Bt407]
gi|228781314|gb|EEM29515.1| Transporter, EamA [Bacillus thuringiensis Bt407]
gi|228787778|gb|EEM35736.1| Transporter, EamA [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228820656|gb|EEM66681.1| Transporter, EamA [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 89/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDI----KHSSTAGIIVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|168700418|ref|ZP_02732695.1| hypothetical protein GobsU_12882 [Gemmata obscuriglobus UQM 2246]
Length = 306
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/308 (9%), Positives = 97/308 (31%), Gaps = 14/308 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + S ++ YILWG T L + ++ + + R L + +
Sbjct: 1 MGTGSPSKVKLLAAFAAI--YILWGSTYLAIRLAIDTLPPFLMAGSRFLIAGAAL----Y 54
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F + + T + + + ++ + + + ++ +
Sbjct: 55 AFGRPAGVPRPTARQWRNAVIGAVPLFVMGNGGVTWAEQAVPSGAAALVIATLPAWLLLL 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF----ARKTI 188
G + +++ L + + +++ G+ + A+ + + +
Sbjct: 115 DWGY-GGRRGPRAMEVAGIALGLTGVAVLSAPGGVDPVGAAVLLGAAVAWAVGSLFNRYA 173
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD--TLFLIGYGLLNSFVFCI 246
+ +S M +LA A+ + + + +
Sbjct: 174 DLPTSPALTAAMQMLAGGAIMIALGLAAGEAGRLDPAAVSWQSAAAVGYLVAVAVVALPA 233
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+++ + + VG + P++ ++ + + + +VV +++ + P
Sbjct: 234 YNWLLSVTSPAAVGTYAFVNPVVAVLLGWAVAGEAVTERTGPAAALVVAGVILLVWPRKR 293
Query: 307 NSGKNKTK 314
+ N+++
Sbjct: 294 AASANESR 301
>gi|15678861|ref|NP_275978.1| hypothetical protein MTH841 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6136579|sp|O26929|Y841_METTH RecName: Full=Uncharacterized transporter MTH_841
gi|2621932|gb|AAB85339.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 343
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 97/306 (31%), Gaps = 18/306 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFA----- 70
E A + + G + + A I +GI+ + L + + + ++ + + +FF
Sbjct: 37 EGAYMRRLWGYISIITATIFFGISATLDKIMLSSMHPVTIGAYTYIIAGIFLFFIRETPL 96
Query: 71 ---IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
++ + +K + +L+ + + F+ L S V
Sbjct: 97 REHVLNAINRKGESEARIKRNDYLILLLTALLSTVIAPLLFLTGLGDTTAVNASLILNVE 156
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTW 178
+ + LG + +E L + +LIIL + + L +A +
Sbjct: 157 VLFIILLGYLIFRETLQLKDFLGIVLIILGAVYLLTEGDFSTILRNVAVTGNFLVMAAAF 216
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ + V + F ++ G + L L
Sbjct: 217 FWSLDTVLSKFLSRKRDLIFISGVKSSVGGFVLLIIMLILGINTELPLEMLPYALGVSVF 276
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
F + I+ S VG + + L + + IL++P ++ I +++ +
Sbjct: 277 SIGCSFILIYIAIREIGASMVGALFPLSSLFGAIFAFIILREPFSIMQGISGIVMLTGVF 336
Query: 299 VYLLPT 304
+
Sbjct: 337 ILYWNG 342
>gi|329920781|ref|ZP_08277368.1| putative membrane protein [Lactobacillus iners SPIN 1401G]
gi|328935561|gb|EGG32028.1| putative membrane protein [Lactobacillus iners SPIN 1401G]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 101/290 (34%), Gaps = 12/290 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ----FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ V + LWGI+ L + QVS + + R+L S +
Sbjct: 1 MKQQKKLWIFLVIISCNLWGISGLCAKRVFDLSTQVSPITITQIRMLISGLFLLLLAQLT 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+K + ++++ L F+ + + + F+ P +F
Sbjct: 61 GK--KPIKILYSRKNIIDIILYGLFGLIPIQLFYFIVVQKSNASIATILQFMGPFFIMFY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VF + L L I+AAL+ + ++ + H +SL+ V + + A
Sbjct: 119 MVVFEHQFLRRLDIVAALVAFMGIIFIATHGNFSKISLSPEVLFWGFLSALGVATNTLIP 178
Query: 195 GFF------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ A ++ + + L ++ L F
Sbjct: 179 RPLLKRMDSVTLIAWSMIATGLIMLIAYPSQILIPKDSRVIILLVVIIILGTILPFYCML 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ K ST I++ P+ + SVF+ + + + +V++A++
Sbjct: 239 NSLRYIKPSTASILDAFEPISATLGSVFVFNLILKPIDWLGTILVILAVI 288
>gi|322833738|ref|YP_004213765.1| hypothetical protein Rahaq_3044 [Rahnella sp. Y9602]
gi|321168939|gb|ADW74638.1| protein of unknown function DUF6 transmembrane [Rahnella sp. Y9602]
Length = 305
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 89/299 (29%), Gaps = 3/299 (1%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ +++ + A Y +WG T + +E L + R + +F ++
Sbjct: 4 SATRSLLPLIAALFALYFIWGSTYFVIRVGVESWPPLMMAGLRFFVAGCILFTFLLLRGH 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ LK + +L+ L V + + + T S G
Sbjct: 64 KVPTLKQWMAAGAVGILLLSVGNGL-VTVAEHMQVPSGIAAVMVATVPLFTLCFSRLWGM 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + I +++L+ + + +A A+ + +
Sbjct: 123 PNSRLEWTGVAIGLFGIVLLNTGSNLEGNPWGAALILLASLSWAFGSVWSSRLPLPTGLM 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ + V + + + +K +
Sbjct: 183 AGAAEMIIAGVVLLVASRVTGEHMTATPSLSGFLALGYLVVFGSMIAISAYMFLLKTVRP 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ Y P++ ++ + + + V + G+++ A+++ L ++ K K
Sbjct: 243 AVATSYAYVNPIVAVLLGIGFAGESLSPVEWVALGVILCAVLLVTLGKLVFGRKKTVIK 301
>gi|227528828|ref|ZP_03958877.1| DMT superfamily drug/metabolite transporter [Lactobacillus
vaginalis ATCC 49540]
gi|227351259|gb|EEJ41550.1| DMT superfamily drug/metabolite transporter [Lactobacillus
vaginalis ATCC 49540]
Length = 311
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 88/278 (31%), Gaps = 10/278 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
M G L LWG + Q+L ++ +++ R+L + + +
Sbjct: 2 TKQMKGILLAAGGASLWGGSGAAAQYLFEQTGITTSWLVAVRLLLAGIVLT-TVSLLKTP 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + V ++ F+ + + A+ + ++ PVI + ++
Sbjct: 61 QQVRRIVSNRRHLVSLIGFALLGMLNSQLTYFLAVKYSNAPTATVIQYLQPVIIIIWLAI 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ + I+ ++ ++ ++ + L+L A + A
Sbjct: 121 AQRQWPRRIDCISIIIALIGTFLLVTGGHLGTLALTPAAIFWGLWCAVAAALYTLLPRPL 180
Query: 198 IE------MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ +C LA+ + L + L F + +F +
Sbjct: 181 LAKFDALAVCGLAMLLSGIGMLPEIIIHRLPSLSLMGWLLVAYIVVFGTMFSYTMFLQSM 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ + GI+ PL+ +V +L + +
Sbjct: 241 RYISPAVTGILSAFEPLVATFLAVTLLGTRLTGAAIVG 278
>gi|149275718|ref|ZP_01881863.1| hypothetical protein PBAL39_20645 [Pedobacter sp. BAL39]
gi|149233146|gb|EDM38520.1| hypothetical protein PBAL39_20645 [Pedobacter sp. BAL39]
Length = 300
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 81/280 (28%), Gaps = 18/280 (6%)
Query: 36 LWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG T L + +E + V + R + +F ++ P +
Sbjct: 19 IWGTTYLGIRVAVETIPPWFVAAIRQSIASLILFAILL-----QRKELAWKGWPHLKRQI 73
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ S ++ V G A T LTS + P+ V ER + I+ L
Sbjct: 74 ILSTLMVVVANGMTTVAEQTVPSGLTSLLNAMNPLFIFVASVVIGMERASVKGIVGLLFG 133
Query: 155 ILSLLIMTLHSGIPLLSLA------------IAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + L + T + +
Sbjct: 134 FAGVAFIFRDGVAGLFDPNYQVGILFIGIALMGWTAGTIYVKKNHHKSENIFLDLFYQFA 193
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ F + + S + + + F + Y +K+ + V I+
Sbjct: 194 FSAVVQFILAFIFSSSTDTSGWSMRSFSAVAYLAIFGSVIAFFCYHYALKKVAPTEVSIL 253
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y ++ + IL + I I ++++ +V+
Sbjct: 254 SYFNTVIALFLGWLILDERITIDIVIATALIILGVVILNY 293
>gi|15805174|ref|NP_293861.1| hypothetical protein DR_0135 [Deinococcus radiodurans R1]
gi|6457802|gb|AAF09725.1|AE001876_2 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 325
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 82/291 (28%), Gaps = 22/291 (7%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
++WG+ + ++ + S L V + R L + + + LL
Sbjct: 17 LALLITLIWGVNFVVIKWSVAGASPLLVAALRFLLAAFPAVLFVPRPTIAPRLLWGYG-- 74
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
A + ++ L + S + L + F E++ Q
Sbjct: 75 ---------LAVGVMQFGLLYLAIQLGMSAGMGSLLMQTQAFFTALLAARFFGEKVMPWQ 125
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
L + ++ L +G + + +T +A + V + ++ A
Sbjct: 126 AAGITLAFGGMALIGLTAGHDVPFFPLLLTLTAALGWAISNLVVKASPQANGFGLVVWSA 185
Query: 208 LF----------YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L G L F I+S I+R S
Sbjct: 186 LIPPIPLALLAGLTAGWGPVMQTLTHSDWKFWAAVLFMGLGNTVLGFGIWSGLIQRHGAS 245
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V + P+ ++S + + + ++ +V+++
Sbjct: 246 RVAPLSLLVPVFGTLASALAFHEGFPPGKVLGAALIAAGLVLHVFGGRWWR 296
>gi|297621127|ref|YP_003709264.1| hypothetical protein wcw_0896 [Waddlia chondrophila WSU 86-1044]
gi|297376428|gb|ADI38258.1| putative membrane protein [Waddlia chondrophila WSU 86-1044]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 94/294 (31%), Gaps = 19/294 (6%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A WG T L + +E VS L + + R + + + LS + + K+
Sbjct: 1 MLLAAF-WGPTFLLIKIGVEAVSPLALTTVRCGSAALFLLGYCLLTQRSLSAVFPSGKHL 59
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + L G + T S +++F RL+ +I
Sbjct: 60 LFMAIFGNVVPFLCCAIGETMVQSSTAGIIEGSVPLI----VALFTALFTPHRRLSKNEI 115
Query: 149 IAALLIILSLLIMTLH-------------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + L +L + G L + +++ ++++ +
Sbjct: 116 LGIAIGFLGILTIFAPDIMQTSGHTEERFLGKMFLVVMAVSFAASFVYSKEKLDNVPHIA 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L+ LF + + + L + +CI+ + IK+
Sbjct: 176 AVTVQLILSGLILFLMTFFIEGRAAFHGFTFKVSAVALSLGIFGTAIPWCIYFHLIKKGS 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ V + Y P++ + L + + + +++ ++++
Sbjct: 236 AAQVSLAVYLLPVVAVFLGWVFLDETLRWNLWLGVALILFSLILASGMLAKRRK 289
>gi|293610635|ref|ZP_06692935.1| predicted protein [Acinetobacter sp. SH024]
gi|292826979|gb|EFF85344.1| predicted protein [Acinetobacter sp. SH024]
Length = 295
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 84/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++G+LF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGSLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLLK----DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + + + I ++ + I + + ++F
Sbjct: 62 KLAFISSTPSKLSVFTQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 122 GRFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLINFHSINFNSDIVLGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIIAGIFLM 288
>gi|293395186|ref|ZP_06639472.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291422363|gb|EFE95606.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 289
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 98/293 (33%), Gaps = 14/293 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A + + + + +V E++ +R ++ V I +K+
Sbjct: 4 LWMLVASVFFALMGASIKLASVKVGFFEIVFYRSFINVLIVAALI--------KIKNLGF 55
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +G+ + A I Y+L+ + + P+ + V K +L
Sbjct: 56 RTRHLGLHMKRAAIGNAAMYCGFYSLIHLPIATATTLGYTNPIFQSVITFVTAKGQLTGR 115
Query: 147 QIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + LL + +L++ + G +L ++ A + G V
Sbjct: 116 LLFSVLLGFVGILVLLRPDVPHGAYAATLIGLLSGLLTALAYFNVGKLVRTGEPELRVVF 175
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V +G F + L + G+ S + V I+
Sbjct: 176 YFSLVGTLVGVVMTGAIGFSALDAATLLNVCAIGVFGSLGQITMTRAYGSGNPVIVSILS 235
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
Y+ + + + + + + +++++ + + +S K + ++
Sbjct: 236 YSTIIFSTLLGFLLFNEKLSYIAAAGMALIILSGGLAI--ARRSSAKTRKAEA 286
>gi|293397079|ref|ZP_06641353.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291420550|gb|EFE93805.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 95/301 (31%), Gaps = 4/301 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
LS+++ SL ++G LF YI+WG T + + L + R L + +F +
Sbjct: 2 LSQQSRSLLPLIGALFTL--YIVWGSTYFVIRIGVASWPPLMMAGIRYLSAGIILFGFLA 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L LK +L+ L V + + T S+
Sbjct: 60 LRGHALPTLKQWFSAGAIGILLLAVGNGL-VTVAEHQEVPSGIAAVMVATVPLFTLCFSM 118
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G K + + +++L+ + + L + +A A+ +
Sbjct: 119 FWGIRNTKLEWAGIVLGLVGIVLLNTGNNLVGNPTGALLILLASASWAFGSVLGSRISLP 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ +L A+ +V + + + +K
Sbjct: 179 AGPMAGAAEMLVAGAVLLLVSQLSGERLTSMPTAGGFFALGYLIVFGSMLAISAYMFLLK 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ Y P++ ++ V + ++ + ++V A+V+ L + ++
Sbjct: 239 NVRPVVATSYAYVNPVVAVLLGVGFAGETLELREWLALLVIVSAVVLVTLGKYLFQRPSR 298
Query: 313 T 313
Sbjct: 299 V 299
>gi|237717002|ref|ZP_04547483.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262405770|ref|ZP_06082320.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644883|ref|ZP_06722621.1| putative membrane protein [Bacteroides ovatus SD CC 2a]
gi|294808237|ref|ZP_06767000.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b]
gi|229442985|gb|EEO48776.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262356645|gb|EEZ05735.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639777|gb|EFF58057.1| putative membrane protein [Bacteroides ovatus SD CC 2a]
gi|294444564|gb|EFG13268.1| putative membrane protein [Bacteroides xylanisolvens SD CC 1b]
Length = 291
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 93/284 (32%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R + G++
Sbjct: 10 LIAILVVAIWGLTFISTKVLINHGLTPQEIFFYRFFIAYLGIWVI-------SPKRLFAG 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q +F P+++ L + E+
Sbjct: 63 NWKDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKAT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I ++L ++ + ++ + L + + + + T +
Sbjct: 123 KGLIYGSILALIGVGLVVFNGSFVLKLSPVGDLLTLLAALSWAFYSLVIKKMTGRYPTVF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + L + + L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFLLHPLQPDFDVLLKPVVLSNLLFLAVLASLVCYVLWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y PL+ +V+SV IL + I + + G ++ +
Sbjct: 243 GTVRASNYIYLNPLVTMVASVIILHEKITWITLLGAGCIIFGVY 286
Score = 35.7 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 1/139 (0%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
L + + + + V + G + + Y+ S F
Sbjct: 5 HGYYHLIAILVVAIWGLTFISTKVLINHGLTPQEIFFYRFFIAYLGIWVISPKRLFAGNW 64
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK-QPIDTV 285
+ + G S F + + + S V + TAPLL + S+ K +
Sbjct: 65 KDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKATKG 124
Query: 286 RTIVFGIVVIAMVVYLLPT 304
+ +I + + +
Sbjct: 125 LIYGSILALIGVGLVVFNG 143
>gi|223042097|ref|ZP_03612271.1| hypothetical protein AM202_0686 [Actinobacillus minor 202]
gi|223017109|gb|EEF15547.1| hypothetical protein AM202_0686 [Actinobacillus minor 202]
Length = 292
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 107/292 (36%), Gaps = 6/292 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L A L+GI + L ++ + +R+ P + AI F +
Sbjct: 2 LKGILCCMGANFLFGIGYYFAILLRPLNGESMFGYRIFVLAPFILLAIFLFKQTGKFTEL 61
Query: 84 TLKNPKAVGMLVFSATIL---AVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + ++ + V F++A Q S Y + P+ +V LG V K
Sbjct: 62 WQKIKQKPPLVFILLLLALNTGVQLWLFLWAPNHGQALEVSIGYLLLPITAVTLGKVVFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+ L+ +A ++ + L SG + +A +
Sbjct: 122 EQFTRLKWLAVFFAVIGVFSNVLLSGTFSWATLVAGLGYPIYITLRRYF--GINHLASFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + F + + + + N FL +GL+N F ++ ++ +G
Sbjct: 180 VELILVMPFALYFILQTDMQPILAENKWIYHFLALFGLVNGAAFILYIASSNLLPVNVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ Y PL+M+ S I + ++ ++ + IA+++ L + + K
Sbjct: 240 LLGYVEPLVMLFISFAI-GEVLEAKSYLLMICLTIAILLLTLDSFKQKKRVK 290
>gi|209964813|ref|YP_002297728.1| integral membrane protein, putative [Rhodospirillum centenum SW]
gi|209958279|gb|ACI98915.1| integral membrane protein, putative [Rhodospirillum centenum SW]
Length = 305
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 88/283 (31%), Gaps = 9/283 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + ++P++ + L ++ + RV +LP + V +
Sbjct: 19 RRALMLLALGTAAIALSPIFFR-LSEIGPIASAFWRVTLALPLLGLWRVAEIK-RNGGAG 76
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +N + L + A F+ ++L + PV +G +F + R
Sbjct: 77 SPRNLRDWAGLFAAGLFFAGDLAFWHWSLTHTTVANATLFANSAPVFVTLVGWLFFRRRF 136
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF------- 196
+ ++ + ++ S + + + E
Sbjct: 137 SPRFLLGLTGALAGAGLLIGASVQIGPDHVVGDGLGMVTAMFLAGYLITVERLRMRFSTA 196
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I + AL ++ + + L + ++ + +Y + +
Sbjct: 197 TIMVWSAVAGALSLLLLALATEPVLVPHTATGWLVLLGLAVISHAGGQSLIAYSMAHLPV 256
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + PLL + + +L + I ++ +++ +V+
Sbjct: 257 AFTSVSLLLQPLLAAIFAAVLLGEAIGGLQVAGGIVILAGIVL 299
>gi|126652334|ref|ZP_01724510.1| hypothetical protein BB14905_00290 [Bacillus sp. B14905]
gi|126590909|gb|EAZ85022.1| hypothetical protein BB14905_00290 [Bacillus sp. B14905]
Length = 290
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/278 (11%), Positives = 89/278 (32%), Gaps = 9/278 (3%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ L G + + L S L + + R + + + + +F K+
Sbjct: 7 IALLVVTTFLMGSSFAIVKLGLPYSSPLLLAALRFILAGIIMAIVVRFFKRPHPTTKEGW 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+G+ + + + +L T +S F P++ V ++F K R
Sbjct: 67 FKLLMIGVFQTAGVMGCI-----FLSLRTISASESSILTFTNPLLVVIFATIFTKVRYRF 121
Query: 146 LQIIAALLIILSLLIMTLHSGIP---LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q I LL ++ ++I +L ++ + A + + +
Sbjct: 122 HQWIGVLLGLIGVIITMGTQVEWKIGILFGFLSAVFWAIATLLAKKWGLLFDTWVLSAYQ 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + F + + + + F + Y ++ +
Sbjct: 182 MLFGGFLLFLASTLLEQPFFIVNQQSLLILIWLSIFSSIIQFAGWYYLLQNSDPGKTSAY 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ AP +++ +L +P+ I +++ + +
Sbjct: 242 LFLAPFFGVLTGWLLLDEPLQPSLMIGGLFILVGIYLV 279
>gi|254974963|ref|ZP_05271435.1| hypothetical protein CdifQC_06605 [Clostridium difficile QCD-66c26]
gi|255092352|ref|ZP_05321830.1| hypothetical protein CdifC_06797 [Clostridium difficile CIP 107932]
gi|255314091|ref|ZP_05355674.1| hypothetical protein CdifQCD-7_07060 [Clostridium difficile
QCD-76w55]
gi|255516769|ref|ZP_05384445.1| hypothetical protein CdifQCD-_06634 [Clostridium difficile
QCD-97b34]
gi|255649869|ref|ZP_05396771.1| hypothetical protein CdifQCD_06759 [Clostridium difficile
QCD-37x79]
gi|260683027|ref|YP_003214312.1| hypothetical protein CD196_1283 [Clostridium difficile CD196]
gi|260686625|ref|YP_003217758.1| hypothetical protein CDR20291_1260 [Clostridium difficile R20291]
gi|306519966|ref|ZP_07406313.1| hypothetical protein CdifQ_07842 [Clostridium difficile QCD-32g58]
gi|260209190|emb|CBA62435.1| putative membrane protein [Clostridium difficile CD196]
gi|260212641|emb|CBE03680.1| putative membrane protein [Clostridium difficile R20291]
Length = 314
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 100/308 (32%), Gaps = 18/308 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F+ A +LW L+ +FL ++ +V R+ + + + +
Sbjct: 3 EKSKGYVFIAIAGLLWATLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQIL 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ A+ + A+ + + + +P+ V
Sbjct: 63 KI----SKKGIIYSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKVCY 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE + ++ + +L + ++ LL ++ A +
Sbjct: 119 KENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGVLSAIAYALMPTISKNALK 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I + A+F + + ++ + L+ + + + ++ GI
Sbjct: 179 EFSSSTILVYSFLFGAIFMIPSSRPWEILNYAKDLDVLSCMLMLGIVPAALAYIFYAAGI 238
Query: 252 KR-AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV---YLLPTVIN 307
+ +LS G++ + ++ IL + + +++I+ VV +
Sbjct: 239 SKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRI 298
Query: 308 SGKNKTKK 315
K+ K
Sbjct: 299 FYKSNKLK 306
>gi|83747092|ref|ZP_00944136.1| Probable transporter, drug/metabolite (DMT) superfamily [Ralstonia
solanacearum UW551]
gi|83726222|gb|EAP73356.1| Probable transporter, drug/metabolite (DMT) superfamily [Ralstonia
solanacearum UW551]
Length = 297
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 92/297 (30%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++W + ++ V + +R L + + F +
Sbjct: 3 VLYPLLAVLVWAANTIISKAAAGVVDPAAISFYRWLIAAIVLTP----FWARPLWRQRRE 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V + L ++ YA + + P++ + + SV ++ +
Sbjct: 59 VLPWLPRLSVLALLGLVLYQCLSYYAAHSTSATNMGVICALIPMLGLIINSVVFRQPVGA 118
Query: 146 LQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + +L +L + L G+ + + + +AY +
Sbjct: 119 PAVAGVAVSLLGVLYLLGRGHPASLLDGGVNHGDVLVVIGSAAYALYNILYRRWAPPFGQ 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L ++ + + + L + + G+ R
Sbjct: 179 WMNLYLQALLAVVMLLPLALTAQSLAVPRQGIGMVLFAGIGASIVAMYWWMLGLARLGSE 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+M P+ V + +L + + I G++++ + + + G+N+ +
Sbjct: 239 RTVVMMNLLPVFTAVMASAMLGETVQGYHWIGGGLILLGVSLVQGIVTLPMGRNRLR 295
>gi|300938370|ref|ZP_07153118.1| integral membrane protein DUF6 [Escherichia coli MS 21-1]
gi|300456665|gb|EFK20158.1| integral membrane protein DUF6 [Escherichia coli MS 21-1]
Length = 325
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 43 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 95
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 96 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 155
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 156 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 215
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 216 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 275
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 276 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 313
>gi|293607787|ref|ZP_06690118.1| membrane protein [Achromobacter piechaudii ATCC 43553]
gi|292813925|gb|EFF73075.1| membrane protein [Achromobacter piechaudii ATCC 43553]
Length = 299
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 76/283 (26%), Gaps = 5/283 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + ++ + + V + RV + + +
Sbjct: 9 LLVLSAVWGASFIFMRVVAPVLGPVVTADLRVAIGAGVLLLY-FALIRFKPRWRAHWRQY 67
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
VG L + + F T ++LG + + L +
Sbjct: 68 AIVGAFNVGLPFLMFSYAAQHIPASYSAIINATTPLFGTVFSVLWLGDSMTRTKGVGLLL 127
Query: 149 IAALLIIL---SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + + S + + +A S S +
Sbjct: 128 GLLGVATITGVGPPMAASASFVSAILACLAAAASYAGAGIYIKRCASHVNPLESAGCAQL 187
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A ++ F + L L + F ++ ++ + ++ +
Sbjct: 188 FAAVALLPFWFVAPPQGQVDLNIALNVLGLGVLSSGLGFLLYFRLVRDIGPARAMMVAFL 247
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
PL IV V L + + + +++++ ++ L
Sbjct: 248 TPLFGIVWGVAFLGEALTPAVLLGAAMIIVSTLLILGSATRAR 290
>gi|255263221|ref|ZP_05342563.1| possible transporter, RhaT family, DMT superfamily [Thalassiobium
sp. R2A62]
gi|255105556|gb|EET48230.1| possible transporter, RhaT family, DMT superfamily [Thalassiobium
sp. R2A62]
Length = 292
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 94/290 (32%), Gaps = 9/290 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++ + + + ++ + + V ++I ++ + FA++ +
Sbjct: 7 RQNIRNIGWMILSMLGFALSDSVIKVLVRDVPTGQIIL--MVGTGGTAIFALLALRQKVR 64
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ P + + + + AL S P+I +VFL
Sbjct: 65 IFSRDFFAPAVLVRNMAEGLGTVLF----VSALAAAPLITLSSIQQAGPLIVTLGAAVFL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--FF 197
KE + + A L+ ++ +LI+ + L + A+ + + + + +
Sbjct: 121 KEHVGPRRWTAVLIGLVGVLIILRPTSDELNAGALLGVSAVVMLSVRDLTTRIAPPNLHT 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ L ++ + + L + + ++ LS
Sbjct: 181 LQLATWGFSMLIPAGALLLFTTSAPVALDLRISGLVAATIALTMLAYFAITASMRTGDLS 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V YT + ++ + L + D+ I IV+++ +
Sbjct: 241 VVSPFRYTRLIFALILGILFLGERPDSWTLIGAAIVILSGLYVFARERRK 290
>gi|224825847|ref|ZP_03698951.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
gi|224602071|gb|EEG08250.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
Length = 310
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/281 (9%), Positives = 78/281 (27%), Gaps = 15/281 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G A + + ++ + + ++ R+ ++LP +
Sbjct: 20 KGVAMALLAALGFSAKAVFVKLGYRYGAGAEALLVLRMAFALPFFLLMAWRSGVAGGARR 79
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
++ + + + + L L + F+ P + +F+ ++L +R
Sbjct: 80 LERRDWR--QLALLGLLGYYLSSLLDFIGLQYVSAALERLTLFLYPTLVLFISVLWLGKR 137
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF------ 196
+ L L + + + + A+ A+ A G
Sbjct: 138 YPAKVWLGVGLAYLGIALAFVQDLRDAGLGSQALIGLAWVIASTVSYALYLVGSGEAIAR 197
Query: 197 -----FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + L +V + + L + L + I
Sbjct: 198 IGATRFAALATLVACLTVFVHFAVTTPLTALLLPGPVYLIGLAMGVFSTVLPVWCLNVAI 257
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
++ + P+L + +L + + ++ + +
Sbjct: 258 RQLGAGKAASVGTLGPVLTMAMGWLVLGESLTGLQVLGAAL 298
>gi|196040082|ref|ZP_03107384.1| transporter, EamA family [Bacillus cereus NVH0597-99]
gi|196028937|gb|EDX67542.1| transporter, EamA family [Bacillus cereus NVH0597-99]
Length = 316
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPKEVGEQILFAGYRFFLSGVMLLFFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K ++ + + F + G + + + L
Sbjct: 74 MNFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|313888295|ref|ZP_07821966.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845698|gb|EFR33088.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 300
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 92/296 (31%), Gaps = 11/296 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ M G F + WGI+ + +Q+L V + + R++ + + F
Sbjct: 2 KNKSKMRGLFFASLGAMSWGISGVCSQYLFMNYDVDSSWLTAIRMVL-SGILLLILSAFK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++K + FS L + ++ A+ + + VI +
Sbjct: 61 DKDKIIKIWTIPKDVGWLFAFSILGLLMCQYTYVSAIKYSDSATATVLQSLNVVIMIVFM 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTI 188
S+ + ++ Q++A L +L +++ + + + +
Sbjct: 121 SIVTRTKMKFSQVLAVFLAVLGTYLISTGGNPRNMTISTAGLIFGLLSAVGVITYTLFSR 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
P+ G + + + + L I + I + + F IF
Sbjct: 181 PIIVKWGNILVTGWGMLIGGLVISIITKAWIIPKDLDFIAWLMIAIIIVVGTAGGFSIFL 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+K ++ P + + L V F +++ + + +
Sbjct: 241 EGVKHIGPVKATLIGCLEPASATLLAAIFLGMRFSLVELTGFFCILLTVFLSVKDK 296
>gi|259501197|ref|ZP_05744099.1| DMT superfamily drug/metabolite transporter [Lactobacillus iners
DSM 13335]
gi|302191006|ref|ZP_07267260.1| hypothetical protein LineA_03230 [Lactobacillus iners AB-1]
gi|259167324|gb|EEW51819.1| DMT superfamily drug/metabolite transporter [Lactobacillus iners
DSM 13335]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 101/290 (34%), Gaps = 12/290 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ----FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ V + LWGI+ L + QVS + + R+L S +
Sbjct: 1 MKQQKKLWIFLVIISCNLWGISGLCAKRVFDLSTQVSPITITQIRMLISGLFLLLLAQLT 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+K + ++++ L F+ + + + F+ P +F
Sbjct: 61 GK--KPIKILYSRKNIIDIILYGLFGLIPIQLFYFIVVQKSNASIATILQFMGPFFIMFY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VF + L L I+AAL+ + ++ + H +SL+ V + + A
Sbjct: 119 MVVFEHQFLRRLDIVAALVAFMGIIFIATHGNFSKISLSPEVLFWGFLSALGVATNTLIP 178
Query: 195 GFF------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ A ++ + + L ++ L F
Sbjct: 179 RPLLKRMDSVTLIAWSMIATGLMMLIAYPSQILIPKDSRVIILLVVIIILGTILPFYCML 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ K ST I++ P+ + SVF+ + + + +V++A++
Sbjct: 239 NSLRYIKPSTASILDAFEPISATLGSVFVFNLILKPIDWLGTILVILAVI 288
>gi|229172336|ref|ZP_04299896.1| Transporter, EamA [Bacillus cereus MM3]
gi|228611132|gb|EEK68394.1| Transporter, EamA [Bacillus cereus MM3]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 90/292 (30%), Gaps = 15/292 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T + Q + V R L++ + F + FS S
Sbjct: 11 LALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKKASKQDI--- 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ + L + + + LL F ++ V+ L +FLK++
Sbjct: 68 -KQSSFAGLIVGFFLCIGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLKQKATIF 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IPVGSSEGF 196
++ + L ++T L I V A FA P+ S
Sbjct: 127 IVMGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISPLLLSTSQ 186
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + + F + + + S F I + K
Sbjct: 187 VLAVGMFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTSAQKHTSP 246
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 247 TRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|218556224|ref|YP_002389137.1| hypothetical protein ECIAI1_3835 [Escherichia coli IAI1]
gi|218362992|emb|CAR00630.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
Length = 307
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVINGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|254362528|ref|ZP_04978631.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
PHL213]
gi|153094128|gb|EDN75027.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
PHL213]
Length = 282
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 76/277 (27%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V +L+G + ++ ++ S ++ RV+ + + ++ L L
Sbjct: 3 KRTLALLKVHGTAVLFGASGIFGALIQS-SAETIVLGRVMIAFAIISLYFLWKKQPLVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
A + +A + + + SF FV S+F
Sbjct: 62 NLQQMAQLAFSAALLAAHWVTFFVAVKVGGVAVATLGFASFPAFVALFESLFFREKLRFR 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +IA + ++ + L V + +
Sbjct: 122 EVVL--LIAITVGLILVTPEFTFGNQATQGLLWGVLSALVYGILAVANRRTMSKISGVQA 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ S E + L + + +F + T +
Sbjct: 180 SWWQYIFATLFLLPLSITEFPSVSTQDWFWIFCIGFLCTTLAYTLFISSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ IV + + I I+++++
Sbjct: 240 IISLEPVYAIVIAWLCFNEVPTLKMIIGGLIILLSVA 276
>gi|219668202|ref|YP_002458637.1| hypothetical protein Dhaf_2167 [Desulfitobacterium hafniense DCB-2]
gi|219538462|gb|ACL20201.1| protein of unknown function DUF6 transmembrane [Desulfitobacterium
hafniense DCB-2]
Length = 313
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/310 (12%), Positives = 95/310 (30%), Gaps = 22/310 (7%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M L + G++ ++ + L + L+ ++HR + I +
Sbjct: 3 EKRMAYLAAIIYAFIIGLSFMFVKLTLTVATPLDTLAHRFTVAFLAATLFIFFTKH---- 58
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + + + + +GF I+ L P+ ++ L LK
Sbjct: 59 -KVNIGWHDVAQIAPLATLYPILFFGFQIFGLARTTSSEAGIIQSTVPIFTLLLAVFILK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++ Q+I+ L + ++ + SG + I + A +
Sbjct: 118 EKVGRGQLISVFLSVFGVIYLLAMSGAESQTANIVGSVLIILSAFTNALYNVLARRLTQR 177
Query: 201 CVLAIPALFYVVWNGFSG----------------GEHFFLGNIPDTLFLIGYGLLNSFVF 244
L ++ + L L L +
Sbjct: 178 YSLLTLTYIMTLFGFIAFNSLAIGSRVLAGTVGEFFQPLLHWQFVVAVLYLGILSSLVTS 237
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ + + + + + + A L+ I++ + L++ I +++ +V L
Sbjct: 238 FLANFVLSKIEAAKMSVFSNVATLITILAGILFLQEAFHFYHVIGGMMIITGVVGTNLMG 297
Query: 305 VINSGKNKTK 314
+ K K K
Sbjct: 298 ARSKAKEKAK 307
>gi|303236442|ref|ZP_07323031.1| putative membrane protein [Prevotella disiens FB035-09AN]
gi|302483414|gb|EFL46420.1| putative membrane protein [Prevotella disiens FB035-09AN]
Length = 288
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/289 (11%), Positives = 82/289 (28%), Gaps = 15/289 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A + +G PL + ++ V+ +R + + + +
Sbjct: 4 KVKGFIAGILAAVFYGTNPLGALPLYAHGITSGNVLFYRYGLATFMFAIWVAFSGETFKI 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + + S F P+++ L VF
Sbjct: 64 KRGHAIKLSV------LGSFVGISSVLLFLSFYYMNAGVASTILFSYPIMTAVLMVVFYH 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFARKTIPVGSS 193
E + ++ LL + + ++ G LS + ++ Y + S
Sbjct: 118 EHIKWATALSILLAVSGIGLLYRGDGGTTLSAMGILLVLGSSLLYALYIVYVNQFKIEMS 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L L + I+
Sbjct: 178 PIKYTLWITLFAWISIVGYMIFVGDPIVMLDETEEWLYALQLALFPTLLSLYCINISIRS 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+T I+ P+ +V S F+ + I +++ ++++ +L
Sbjct: 238 IGSTTSSILGALEPVTAVVISTFVFGEAFTLRLAIGIVMILSSVLLIIL 286
>gi|218260518|ref|ZP_03475788.1| hypothetical protein PRABACTJOHN_01451 [Parabacteroides johnsonii
DSM 18315]
gi|218224503|gb|EEC97153.1| hypothetical protein PRABACTJOHN_01451 [Parabacteroides johnsonii
DSM 18315]
Length = 319
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 90/305 (29%), Gaps = 27/305 (8%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F A +WG+ ++F+ V+ L V R+ ++ + +
Sbjct: 6 WKGHAAMFGANAMWGLMSPISKFIMLGGAVTPLVVTDLRIGGAMVLFWITSFFQK----- 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + V S + + G FI+ + S P+ ++ L ++ LK
Sbjct: 61 -PEHVNHKDLASLFVASLLGIVFNQGCFIFGVSLSSPGDASIITTSMPLWAMVLAALILK 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF----------------- 183
E + +++ L++ L +G + +
Sbjct: 120 EPITGKKVLGIAAGASGALLLILGNGQNGQGTSATTAGGTMIWGDLLVLLAQFCYALYIV 179
Query: 184 -ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + S M + + N + L
Sbjct: 180 LYKDFVNKYSLVTIMKWMFTYSFICILPFSANSLMRTDWSSLHLPELGGLSFIVVGATFI 239
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + G K + + G+ Y PL+ + +V + ++ I + + + L
Sbjct: 240 SYMLIVVGQKNLRPTVAGMYNYIQPLVACIVAVCWGMDSFNFIKGIAVVFIFGGVYLVTL 299
Query: 303 PTVIN 307
Sbjct: 300 SRSRK 304
>gi|89070566|ref|ZP_01157855.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
gi|89043873|gb|EAR50071.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
Length = 297
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 89/287 (31%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + A + + + + ++ ++ + R L + + A ++
Sbjct: 4 SDNTRGALLMMAAMTAFTLNDACLKLISGQITPMQAVFLRGLLTTALLAVAALWSGALRV 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + +G+++ A FF+ AL + P+ ++
Sbjct: 64 RLA-----RRDLGLVLLRGVAEAAAAWFFLTALFNMPLADMTAILQALPLAVTLGAALVF 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + ++ A L + +L++ ++ + +C + +
Sbjct: 119 GESVGWKRVSAILAGFVGVLLIVRPGSDVFSVYSLFGVATVFCATVRDLATRRLSREVPS 178
Query: 200 -MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
LA + V+ GE + + + +L + ++ ++
Sbjct: 179 LTVTLASASTVTVLAALVGLGEEWATPTPGEYGIIALSSVLVLIAYLTVIMAMRVGDIAL 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
V YT L+ IV + + D + IVV + +
Sbjct: 239 VAPFRYTGLLVAIVLGLVVFGDWPDALTWTGSAIVVGSGLFAFWRER 285
>gi|262274378|ref|ZP_06052189.1| permease [Grimontia hollisae CIP 101886]
gi|262220941|gb|EEY72255.1| permease [Grimontia hollisae CIP 101886]
Length = 293
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/296 (8%), Positives = 91/296 (30%), Gaps = 13/296 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+L + A +L ++++ ++ + + R + + + +
Sbjct: 5 RRASLILLAATVLAAWGWIFSKEAIQGMPPFGFVGLRFIAASLFLGPFCL-------KAL 57
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + + ++ +F ++ + + V K++
Sbjct: 58 KRVDTHDLLRAAGVGSLLSCALLSWIYAMSVSASLGEGAFIMSLSMLFVPPIAWVLFKQK 117
Query: 143 LNHLQIIAALLIILSLLIMT-----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ + + L +++ + +A A F
Sbjct: 118 PPRIFWVSMPIAVSGLSLLSLGGVGWQLSASQIWFLLAAVCLAIHFNVNNRYAQRIPALV 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + + V + + + + F + + S + + + G K A +
Sbjct: 178 LTCIQLFVTGVVASVVSLLTETWPEQVPSNIWVWFSLSVVVATSLRYLMQTLGQKGASAA 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I+ P+ +V SV + + + +++ ++++Y + +
Sbjct: 238 NAAIIMILEPVWTVVLSVVWYHEAMPAHKIAGCSLILASLLIYRGIAPLQRWLRRK 293
>gi|239832386|ref|ZP_04680715.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824653|gb|EEQ96221.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 339
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 81/292 (27%), Gaps = 1/292 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + + + A +WG+ + + + + I R + V V
Sbjct: 41 RMTRVQANMLLLLAGAIWGMGFVAQSTAMASIGPFLFIGIRSAIASLTVLPWAVAEGRRA 100
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + L + I +T GFLT + PV+ V L +
Sbjct: 101 KIALRRSDYLFFMVIGLSLFIGLVLQQIGLITTSVTNAGFLTGLYVVMVPVLGVILFRTW 160
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ I L L + + A ++ +
Sbjct: 161 PHPVVWPSAAACLAGIFLLSGGTLTALKQGDLLVIGGAVFWALQVVLIGKANRAARPITL 220
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
A A+ + ++ + L + F + + G + +
Sbjct: 221 SCVQFATSAVAGLAIASMVEDLNWTAIALTWKEILFTGVFSSGVAFTLQAIGQRYTTSAQ 280
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I + L + L + + + I G++ AM+ L + K
Sbjct: 281 AAIFLASEALFAALFGALFLGERVTFIGLIGCGLIFSAMMAVELIPMFWKRK 332
>gi|300785599|ref|YP_003765890.1| transport protein [Amycolatopsis mediterranei U32]
gi|299795113|gb|ADJ45488.1| putative transport protein [Amycolatopsis mediterranei U32]
Length = 308
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 72/266 (27%), Gaps = 7/266 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF-SGGLSLLKD 83
G V A LWG V + + + R++ +F + S +
Sbjct: 8 GVAAVLGAATLWGTVGPAQVLASTDVDPVALGALRLIGGGIILFGLVAARDRATFSRWRS 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +L+ +A A F T T + V P L + ERL
Sbjct: 68 LGRGGALGWLLLAAAATAAYQAAFLSSVERTGAALSTVVTLGVAPPAVGALARLGGGERL 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I + + ++ L L V V + +
Sbjct: 128 TRPWIFGTVAAVAGTAVLLLPDASVRLDTFGVVLGIVGGLCYGVYTVAAKKLLDSAAPTF 187
Query: 204 AIPALFYVVWNGFSGGEHFFLG-----NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
A V+ + L G + + F G++ ST
Sbjct: 188 VAVATTLVLGGAMMLPFTGDVSRAFAEPDAFALVGWLAGPATALGYFWFVSGLRHVTAST 247
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDT 284
G + PL+ V V +L + +
Sbjct: 248 AGTLSLAEPLVAAVLGVVLLGERLSL 273
>gi|229825281|ref|ZP_04451350.1| hypothetical protein GCWU000182_00634 [Abiotrophia defectiva ATCC
49176]
gi|229790653|gb|EEP26767.1| hypothetical protein GCWU000182_00634 [Abiotrophia defectiva ATCC
49176]
Length = 305
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 75/281 (26%), Gaps = 4/281 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F A L+ I +++ LE + + + + G+ F + K+
Sbjct: 9 KGIAFAILAASLYAINAPFSKILLEFMPPTLMAGFLYVGAGIGITFIALIRKMKKHETKE 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + ++ L S V + + + KE++
Sbjct: 69 LKLTKSELPYTIAMIILDIAAPICLLFGLNATTAANASLLNNFEIVATAIIALMVFKEKI 128
Query: 144 NHLQIIAALLIILSLLIMTL---HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L I LS I++ S + + S +++
Sbjct: 129 SPRLWFGILFITLSCGILSFEDVSSLHFSYGSLFVLLSAICWGFENNCTRKISSKDPLQI 188
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L L + + Y + +
Sbjct: 189 VLLKGIFSGIGSLIIGLYMGERTSSLWSIFAVLWIGFIAYGLSIYFYVYAQRLLGAARTS 248
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
AP + + S+ IL++ D +++I +
Sbjct: 249 AYYAVAPFIATILSLIILREVPDIAYYFALALMIIGAWLSS 289
Score = 36.0 bits (81), Expect = 7.1, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+SL G+LFV + I WG T+ + L+++ + ++S G +Y
Sbjct: 152 SSLHFSYGSLFVLLSAICWGFENNCTRKISSKDPLQIVLLKGIFSGIGSLIIGLYMGERT 211
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
S L +L + F++YA TS Y V P I+ L +
Sbjct: 212 SSL------WSIFAVLWIGFIAYGLSIYFYVYAQRLLGAARTSAYYAVAPFIATILSLII 265
Query: 139 LKERLNHLQIIAALLIILSLLI 160
L+E + A L+I+ +
Sbjct: 266 LREVPDIAYYFALALMIIGAWL 287
>gi|89054836|ref|YP_510287.1| hypothetical protein Jann_2345 [Jannaschia sp. CCS1]
gi|88864385|gb|ABD55262.1| protein of unknown function DUF6 transmembrane [Jannaschia sp.
CCS1]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 96/295 (32%), Gaps = 9/295 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ ++ A + + + + E++++R + L V
Sbjct: 12 PASNVPKAAAYMIGAIFAFSAMAVAGREATVDLDTFELMTYRSVVGLVLVLLVGGLTGHL 71
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + F+ L + +A+ F +P+ + L ++
Sbjct: 72 PEIRTNRMPTHILRNIFHFTGQNL------WFFAVGVIPLAQLFALEFTSPLWVMGLAAL 125
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
FL ERL +++ AA++ + +LI+ P + A +A CFA I
Sbjct: 126 FLGERLTRVKVAAAIIGFVGVLIVVQPGSAPFSTGMGAALLAAICFAATAIFTKRLTNDQ 185
Query: 198 IEMCVLAIPALFYVVWNGFSGGEH--FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
C+L + ++ + ++I G + A
Sbjct: 186 STTCILFWLTVIQLILGLIFCLYDGEMAWPDAATRPWVILIGFAGLIAHFCMTSAFAHAP 245
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S V +++ L+ V + +P+ I ++ A + +L S +
Sbjct: 246 ASVVMPIDFARLPLIAVVGMLFYGEPLLLGVLIGAFLIFGANYMNILAEHRRSQR 300
>gi|28378087|ref|NP_784979.1| transport protein [Lactobacillus plantarum WCFS1]
gi|28270921|emb|CAD63826.1| transport protein [Lactobacillus plantarum WCFS1]
Length = 312
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 94/298 (31%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFA--IVYFS 75
+ ++GTL + L+G+ + Q L ++ +++ R+L + + +
Sbjct: 1 MKRLVGTLCGIISAALFGLGGILAQPLLSEQVLTPQQIVLLRLLIGGAMLLLYRNLFFKQ 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S K ++++ L F A+ + + +P I +
Sbjct: 61 ARKSTKKIWTHWRILTRIMIYGIAGLCTAQIAFFSAINYSNAAVATVFQSTSPFILLVFT 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ K + L ++ + ++ + ++ L A+ + +
Sbjct: 121 ALKAKRLPSLLAGMSLISALMGIWLIVESGFKTGLIKPEAIIFGLIAAIGVILYTKLPVP 180
Query: 196 FFIEMCVLAIPALFYVV-----WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ + I V+ LI L + ++
Sbjct: 181 LLNQIAAVDILGWALVIGGVIALIHTPLPNLVRFSKTQLLAVLIIVILATVVAYDLYLES 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K + P+ ++ + L Q + + +VV A+++ LP I +
Sbjct: 241 LKLIDGFLATMTGLFEPISSVLFGMLFLHQILVPQALVGIILVVGAIMILNLPHHITA 298
>gi|87124240|ref|ZP_01080089.1| putative membrane protein [Synechococcus sp. RS9917]
gi|86167812|gb|EAQ69070.1| putative membrane protein [Synechococcus sp. RS9917]
Length = 318
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 78/278 (28%), Gaps = 15/278 (5%)
Query: 29 FVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + + + + + L + V E++ R + SL +
Sbjct: 31 LLLACALAFSLMTVCVKHLGGRLPVAEIVLVRSVISLAITLAML--------RQAQISPW 82
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ +L+ + F AL + + P ++ + L E L
Sbjct: 83 GQQRPLLMLRGALGTGALLLFFEALARLPLAAATLIQYTYPTLTALTAWLLLGEPLRKRI 142
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGSSEGFFIEMC 201
+A LL L + ++ + + A A + V +
Sbjct: 143 GLAVLLGWLGVTLVVQPEWMGETVRNLPLLAVLIGLGGALLTALAYVSVRRLSVREHPLV 202
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ V + + +LIG GL + G+ +
Sbjct: 203 IVFYFPFISVPVTLPMLWGQGVWPTLTEWFWLIGVGLFTQLGQVWLTEGLAVLPAARATS 262
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y + V +PI I G V+ A ++
Sbjct: 263 INYVQVAFATLWGVLWFAEPITGTVVIGAGCVLAATLI 300
>gi|332873582|ref|ZP_08441530.1| putative membrane protein [Acinetobacter baumannii 6014059]
gi|323519711|gb|ADX94092.1| DMT family permease [Acinetobacter baumannii TCDC-AB0715]
gi|332738214|gb|EGJ69093.1| putative membrane protein [Acinetobacter baumannii 6014059]
Length = 295
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLLK----DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + A + I ++ + I + + ++F
Sbjct: 62 KIAFISSTPSKLSVFAQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 122 GRFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLVNLHSINFNSDIILGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 288
>gi|296136440|ref|YP_003643682.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
gi|295796562|gb|ADG31352.1| protein of unknown function DUF6 transmembrane [Thiomonas
intermedia K12]
Length = 319
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 86/301 (28%), Gaps = 15/301 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G V A LWG T + L + + + R+ S+P +
Sbjct: 14 SGKSARDGWAAVLTAATLWGTTGIVFHALGTSGGANAVSISFLRLALSVPFLLVMARIRM 73
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G ++ + + + + S + P+ +
Sbjct: 74 GIWLAPLTV---RGFFLLVWLGLAMASYQLTYVLAIDRVGVAISVLISICLAPIFVALIS 130
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARK 186
V+L ERL ++A + I+ +++ +++A+ +
Sbjct: 131 VVWLGERLQPRTLVALVTAIVGTVLLVGLPTEVNQNTDGFWIGVAIAVVCAVCQAFYVLA 190
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
G + ++ G G + L + + +
Sbjct: 191 ARASSGVCGPMHAGGIGFAIGALALLPFGLVEGLQLSYSPSGWAMLLYVAAVPTAIAQTL 250
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F G+K I PL+ V +V +L + + V + +++ +V+
Sbjct: 251 FLTGLKGTGAIGGAIASLLEPLVATVLAVILLHERMTWVGVLGAVVLLSGIVIIQWTPKK 310
Query: 307 N 307
Sbjct: 311 Q 311
>gi|229159556|ref|ZP_04287570.1| Transporter, EamA [Bacillus cereus R309803]
gi|228623858|gb|EEK80670.1| Transporter, EamA [Bacillus cereus R309803]
Length = 316
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 96/300 (32%), Gaps = 23/300 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLCFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K ++ + + F + G + + + L
Sbjct: 74 MNFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + F G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSIGLLCIGVFQVGAMPFTFSLHAILMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TIMKYNKVGQVSMYMFFIPVFGVLLSSMILGETIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|116070447|ref|ZP_01467716.1| hypothetical protein BL107_12415 [Synechococcus sp. BL107]
gi|116065852|gb|EAU71609.1| hypothetical protein BL107_12415 [Synechococcus sp. BL107]
Length = 302
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 87/287 (30%), Gaps = 13/287 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G+ + + + + + + + L + V E++ R + SL +
Sbjct: 12 ASEQAKGSRSLILSSLAFSLMTVCVKQLNGRIPVTEIVLVRAIISLALTGMGLRLAG--- 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
KA G+L ++ F A+ T + + P +
Sbjct: 69 ---VQPWGTAKARGLLFARGIAGSMALLCFFQAIDTLPLAAATVLQYTYPTFTALAALFL 125
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTIPVGS 192
L E L I A LL + + + + A+ A A + V
Sbjct: 126 LGESLRKRIIFAVLLGWVGITFVVQPDWLTGDVQALPLTPALIGILGALFTALAYVSVRR 185
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L V + ++L+G G+L + G++
Sbjct: 186 LSATEHPLVIILYFPLISVPITLPWVIGTGVWPMGVEWIWLLGVGVLTQLGQIWVTDGLR 245
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
R + + Y + + I + G+V+IA ++
Sbjct: 246 RLPAARATSINYIQVVFAASWGWLWFSESISLWQIGGSGLVLIATMI 292
>gi|13473318|ref|NP_104885.1| hypothetical protein mlr3874 [Mesorhizobium loti MAFF303099]
gi|14024066|dbj|BAB50671.1| mlr3874 [Mesorhizobium loti MAFF303099]
Length = 303
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 87/275 (31%), Gaps = 16/275 (5%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ VS + ++ R + ++ + + + +
Sbjct: 16 WGGNSVAGKLAVDHVSPMMLVFLRWVLAVAILLPI----GWRSIQQDWPVVRRHWLILAA 71
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
A+ + F AL S P++ + VF + R+N QI +L I
Sbjct: 72 LGASGFTLFNVIFYTALNYTTAINVSIEQAAMPILIMTANFVFFRLRVNWAQIAGVVLTI 131
Query: 156 LSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+++ H + L V +S Y + P + + M + A
Sbjct: 132 AGVILTACHGDPRRLLTLELNFGDAIMLVAVVLYSGYSVGLRLKPALRWQSLMLTMSIAA 191
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + + G T+ + + + G + + G+
Sbjct: 192 LITSLPFLLWEVAAGTVVVPDARGWTVIVYTAIGASVVSQITYIRGNELIGANRAGLFIN 251
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + SV I+ + + + +V+ + +
Sbjct: 252 LVPIFGTLLSVLIVGETFQLYQALALVLVLGGIGL 286
>gi|315651584|ref|ZP_07904601.1| DMT superfamily drug/metabolite transporter [Eubacterium saburreum
DSM 3986]
gi|315486143|gb|EFU76508.1| DMT superfamily drug/metabolite transporter [Eubacterium saburreum
DSM 3986]
Length = 351
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/294 (9%), Positives = 83/294 (28%), Gaps = 6/294 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ ++ + A + I +++ L ++ + S L + GV ++ +
Sbjct: 3 NNRKILSVILALLAATFYAINTPFSKLLLDKIAPTFMASFLYLGAGIGVGIMYLFHAKSE 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + + ILA F + + T S V + + +
Sbjct: 63 DKFERLTKENLLYTVGMIVLDILA--PIFLMIGINTGSASNASLLGNFEIVATAIIALLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR---KTIPVGSSEG 195
KE + A + I +S ++++ ++ ++
Sbjct: 121 FKESVTLRLWCAIVFITISSIVLSFEGTGSFKFSIGSLFVILATCCWGLENNCTRKLADK 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
E+ L + L+ + ++ +
Sbjct: 181 STYEIVFLKGIFSGTGSFLIAIFIGESIPEIKYIIFALLLGFVAYGLSIFMYIRAQRDLG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ G AP + + + + + V ++I + + T++ +
Sbjct: 241 AAKTGAYYAVAPFIGTFLAFIVNGERLTAVYFTGLIFMIIGSTIVIYDTMLKNH 294
Score = 38.7 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 6/169 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G+LFV A WG+ T+ L S E++ + ++S G F ++ + +
Sbjct: 155 IGSLFVILATCCWGLENNCTRKLADKSTYEIVFLKGIFSGTGSFLIAIFIGESIPEI--- 211
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ L+ + +I A T Y V P I FL + ERL
Sbjct: 212 ---KYIIFALLLGFVAYGLSIFMYIRAQRDLGAAKTGAYYAVAPFIGTFLAFIVNGERLT 268
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + +I+ I+ + + T +
Sbjct: 269 AVYFTGLIFMIIGSTIVIYDTMLKNHIHYHIHTIVHTHNGSTHKHIIKH 317
>gi|300119229|ref|ZP_07056923.1| transporter, EamA family protein [Bacillus cereus SJ1]
gi|298723337|gb|EFI64085.1| transporter, EamA family protein [Bacillus cereus SJ1]
Length = 303
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGMYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T G+
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGVFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 285
Score = 35.7 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|262280420|ref|ZP_06058204.1| DMT family permease [Acinetobacter calcoaceticus RUH2202]
gi|262258198|gb|EEY76932.1| DMT family permease [Acinetobacter calcoaceticus RUH2202]
Length = 294
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 83/287 (28%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFSFLSVFLFKVPVSQ 61
Query: 79 SLLKDTLKNPKAVGMLVFSAT----ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + K + I ++ + I + + ++F
Sbjct: 62 KIAYISNTPSKLSVFTQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G + LKE + II LL + + +++ L+ + +V Y I
Sbjct: 122 GRLVLKESIYIHSIIGTLLAVTGISVISWKGENSLLMLINASVAGIGYGLFSVLIKKFRL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAIPFLINFHSINFNTDIILGLVGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 288
>gi|227538453|ref|ZP_03968502.1| possible permease [Sphingobacterium spiritivorum ATCC 33300]
gi|227241735|gb|EEI91750.1| possible permease [Sphingobacterium spiritivorum ATCC 33300]
Length = 303
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 81/288 (28%), Gaps = 4/288 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WG T + + VS + ++ +RV + + ++ + + K
Sbjct: 10 ILVLHLTVLIWGFTGILGGLIS-VSAIHLVWYRVGIAAIALAVYFLFKRQSIVVSKRDFL 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V + + + + L+S + + + +
Sbjct: 69 -KFFMTGAVVGLHWVLFFYSIKVSTVSVTLVTLSSVTLYTAIFEPMLYKRKIAALDIVIG 127
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
II + + +GI K + S + A
Sbjct: 128 LIIILGIYTIFQFETRYLAGIISGLACAFCASVFSILNGKMVKSSSPTIITFYEMLGAFF 187
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ + L L+ + + + + +K TV +
Sbjct: 188 WISVFMLFSGDFNASMQLSQQDLWYLLLLGVVCTAVAYVMGVAVMKELTAFTVALTTNLE 247
Query: 267 PLLMIVSSVFILK--QPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ I+ +V I + + + IV+ A+ +Y + K
Sbjct: 248 AVYGIILAVLIFGHKETMSLGFYVGAVIVLTAVFLYPYVKTRMENRQK 295
>gi|300777920|ref|ZP_07087778.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300503430|gb|EFK34570.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 289
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 99/292 (33%), Gaps = 16/292 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A IL G T ++ + + ++ ++ +R+L+S +FF I
Sbjct: 5 YLLLHLAVILAGFTGVFGKLIT-LNEGLLVWYRLLFSSIILFFIIKLLK------IPGHI 57
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + +L HW F ++ + Y +T + V KE+
Sbjct: 58 SFRGKIQISKAGLLLTFHWLLFYASIKYANISIGVVCYCLTSFFTAVFTPVIEKEKFKLS 117
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+++ + L I+ + ++ L + + V SA+ F +
Sbjct: 118 ELLLSTLTIIGISLIFHFDTSYQLGIILGVFSSAFGALYTIYNKRLVNHFDTRVINYYQM 177
Query: 207 ALFYVVWNGFSGGEHFFLGNIPD-------TLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V W + + + ++ +F+ +K+ TV
Sbjct: 178 MAGTVCWGALLPVYLLYFQSDSIVPDLKNTAYLGVLSLFCTVGLYVMFAEVLKKIPAFTV 237
Query: 260 GIMEYTAPLLMIVSSVFILKQP--IDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ I+ + + ++ I ++ ++V+ + ++ +
Sbjct: 238 NLTYNLEPVYAIIMAFLFFGESKEVNLSFYIGLLFIIASVVLQTVISIKKTK 289
>gi|161523912|ref|YP_001578924.1| hypothetical protein Bmul_0732 [Burkholderia multivorans ATCC
17616]
gi|160341341|gb|ABX14427.1| protein of unknown function DUF6 transmembrane [Burkholderia
multivorans ATCC 17616]
Length = 343
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 84/284 (29%), Gaps = 22/284 (7%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG+ + + L + + + + R + F + + P + +L
Sbjct: 67 WGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFV-----------RRPQIPWRMLLLY 115
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ L F + L S ++ +FL ERL +I +
Sbjct: 116 GATIQLGQFVFLFTGMYVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLIGLAIAA 175
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
L+++ G + +T ++ V G + ++ +L V
Sbjct: 176 AGLVVIASQGGRAMTLAGFLLTIASAAMWAFGNIVTKKVGNANLVSLVVWASLVPPVPFF 235
Query: 216 FSGGEHFFL----------GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + + ++S + R + V
Sbjct: 236 VLSLWFEGPQRIGAALAALNVSSIFAVVYLAFVATLLGYGLWSRLMSRYPAAQVAQFSLL 295
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P++ + SS +L + + + + I +V+ + V + +
Sbjct: 296 VPIVGLASSALLLDEHLTSAQLIGAALVMGGLAVNVFGGKLMRR 339
>gi|91788295|ref|YP_549247.1| hypothetical protein Bpro_2430 [Polaromonas sp. JS666]
gi|91697520|gb|ABE44349.1| protein of unknown function DUF6, transmembrane [Polaromonas sp.
JS666]
Length = 291
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 81/294 (27%), Gaps = 8/294 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + ++W I + T+ LE E+ R +++ + + F G
Sbjct: 1 MKLTHSKAVALMILVTLMWSIAGVVTRHLESARSFEITFWRSFFTVLSLLVILPVFQG-- 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K + S +V + F+ AL + + P ++ L +F
Sbjct: 59 --RAVFSKIRQGGITFWLSGICWSVMFTAFMVALTLTTVANVLVTMAIGPFLTALLARIF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ R+ A + + M +L + A + G +
Sbjct: 117 IGHRIPPRTWFAIAMAGAGIAWMYGGQMDLASHLGGTLVALLVPLAGASNWTLVQHGHAH 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G I++ + F L + + + +
Sbjct: 177 GQRIDLVPAVLLGAVVSSLVTLPLSLPFSATPHDLGLLALLGLVQLAIPCVLSVLCASVL 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K V ++ + I+ + + +V+ A+V+ L
Sbjct: 237 KAPEVALLALLEVIFGILLAWIGANEVPGASVLTGGALVIAALVLNELIGWRQR 290
>gi|91776065|ref|YP_545821.1| hypothetical protein Mfla_1712 [Methylobacillus flagellatus KT]
gi|91710052|gb|ABE49980.1| protein of unknown function DUF6, transmembrane [Methylobacillus
flagellatus KT]
Length = 277
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 92/284 (32%), Gaps = 12/284 (4%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + I + + ++ + E++ +R L+ L + Y L
Sbjct: 1 MLVAAFFFAIMGVLVKLGAQKFASAELVFYRSLFGLLLIVAVTHYRRLSLRTR------- 53
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + F +A+ + +P+ L E+ + +
Sbjct: 54 -LINPHMKRGILGFASLLCFFFAISELPLATAITLNYTSPLFLAMAMPFMLHEKPRKILL 112
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A +L + + ++ S +A + + A + G E +
Sbjct: 113 LAVVLGFIGVTLLLKPSLHMDELIAGVIGLLSGAMAGIVYVHVTQLGRAGEPDWRTVFYF 172
Query: 209 FYVVWNGFSGGEHFF---LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
V G + + D L+G G + + + VG + Y+
Sbjct: 173 TLVCTIGSGLWMLCYHFTPPDWSDMPLLLGLGASATVAQLALTRAYRTGSPLVVGSLAYS 232
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+L + + + ++ + R + G++V++ ++ + T +
Sbjct: 233 TVVLASLFGILVWQETLSLDRWLAVGLIVLSGIISVCATPRPNK 276
>gi|29349459|ref|NP_812962.1| hypothetical protein BT_4051 [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570172|ref|ZP_04847581.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29341368|gb|AAO79156.1| putative transmembrane permease [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840553|gb|EES68635.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 305
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 103/294 (35%), Gaps = 18/294 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G LF A ++WG+ + L++ S + V + R++ + + ++
Sbjct: 3 NNKNLHGHLFALTANVMWGLMSPIGKSALQEFSAISVTTFRMVGAAAAFWILSIFCKQ-- 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + + S L + G FI+ L S P++++ + +++
Sbjct: 61 ----EHVDHRDMLKIFFASLFALVFNQGIFIFGLSMTSPIDASIVTTTLPIVTMIVAAIY 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFARKT 187
LKE + + +++ + + LI+ + S G L +A +
Sbjct: 117 LKEPITNKKVLGIFVGAMGALILIMSSQAASSGNGSLIGDLLCLVAQISFSIYLTVFKGL 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S+ M + A + S + + + L + +
Sbjct: 177 SQRYSAVTINKWMFIYASMCYIPFSYQDISVIQWTSIPMVAILQVLYVVLGGSFLAYLCI 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
K + + V + Y P++ ++++ + + I +V + + +
Sbjct: 237 MTAQKLLRPTVVSMYNYMQPIVATIAAILMGIGSFGWEKGIAITLVFLGVYIVT 290
>gi|326939311|gb|AEA15207.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 301
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 89/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 62 KQDI----KHSSTAGIIVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 118 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 178 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 296
>gi|294778276|ref|ZP_06743702.1| putative membrane protein [Bacteroides vulgatus PC510]
gi|294447904|gb|EFG16478.1| putative membrane protein [Bacteroides vulgatus PC510]
Length = 308
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 90/304 (29%), Gaps = 20/304 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ G L + A I+WG+ + +S L + + R+ + A ++
Sbjct: 1 MAIQKYKGHLALLGAAIMWGLMSPIGKTALENGISGLSLATFRMTGGAICFWIASIFAPK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + + + ++ G F + L S P+ ++ + +
Sbjct: 61 ------EQVNPHDLMMLFFAGLLGIVLNQGCFTFGLSLTSPIDASIVTTTAPIATMIVAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFA 184
++LKE + ++I L + L + L S G L LA
Sbjct: 115 IYLKEPVTGKKVIGIFLGSIGALTLILSSQGSTDGKGGSIPGDLLCLLAQISFSFYLAIF 174
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ I + M A ++ S + +
Sbjct: 175 KGLISRYNIFTLMKWMFTYAAICFIPFSYHEVSTIHFHEISTSTWACVAYVIVGGTFLAY 234
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G K + + + + Y P++ S+ + + I +V + +
Sbjct: 235 ILMMIGQKTLRPTVISMYNYVQPIVGTSVSILLGMGTFGVAKGIAVALVFTGVYIVTQSK 294
Query: 305 VINS 308
Sbjct: 295 SREQ 298
>gi|228924964|ref|ZP_04088103.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228834692|gb|EEM80192.1| Permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 310
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 103/285 (36%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMIFSFKQLKKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ ++FLKE +
Sbjct: 64 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEEIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLFITIPSKSANQEVSLIGDILILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + F G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALVEIFYYGLPKVETWKTGLSVIYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
R S G+ PL+ IV+S+ +L + + + +V+I +
Sbjct: 244 RVSASVSGLYLNALPLISIVTSIILLNEFLTWRVIMGASLVLIGV 288
Score = 39.9 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 48/143 (33%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMIFSFKQLKKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S LK+
Sbjct: 61 VVHKKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSALFLKEE 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGAIGVLFITIPS 143
>gi|189461768|ref|ZP_03010553.1| hypothetical protein BACCOP_02434 [Bacteroides coprocola DSM 17136]
gi|189431528|gb|EDV00513.1| hypothetical protein BACCOP_02434 [Bacteroides coprocola DSM 17136]
Length = 310
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 94/306 (30%), Gaps = 20/306 (6%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYF 74
EN ++ + L + A +WG+ + ++ L + + R++ + A ++
Sbjct: 3 ENMNVKVIRAHLALLGAASMWGLMSPMGKAAMEAGITGLSLATMRMIGGAVCFWIASLFA 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + + + G F + L S P++++ L
Sbjct: 63 PKEK------VSSHDLMLLFFAGLLGIVCNQGCFTFGLSLTSPIDASIVTTTMPIVTMIL 116
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYC 182
++FLKE + ++I L + L++ L G L A
Sbjct: 117 AALFLKEPVTPKKVIGIFLGSIGALMLILSNQGGSVDGGGSILGDALCITAQVSFACYLT 176
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+K I + M A + FS F
Sbjct: 177 IFKKLISRYNVFTLMKWMFTYAAICFIPFSYRDFSAMTTMSFSATVWMEVGYVVLFGTFF 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + G K + + V + Y P++ SVF+ + + ++ + + V
Sbjct: 237 AYILMLVGQKTLRPTVVSMYNYIQPIVGTTVSVFLGMGVFGWTKALAAVLIFVGVYVVTQ 296
Query: 303 PTVINS 308
Sbjct: 297 SKSRAQ 302
>gi|163794965|ref|ZP_02188934.1| integral membrane protein, putative [alpha proteobacterium BAL199]
gi|159179784|gb|EDP64311.1| integral membrane protein, putative [alpha proteobacterium BAL199]
Length = 294
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 89/283 (31%), Gaps = 8/283 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L++ + +++ + + + ++ R + L + + L+
Sbjct: 1 MLWIALSGLIFSCFMALVRHVGSHMDPIQTSFMRYGFGLLFLAPFFI-------KLRWPD 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + + YA+ + F PV + +FL E +
Sbjct: 54 VVAANLKLHLLRGLMHGTGVMLWFYAMTRIPLAEVTAIGFTNPVFATIGAVLFLGESIRL 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+I A ++ + L++ + + AIA+ +A FA + S V+A
Sbjct: 114 PRIAAVVVGLFGALLIVRPGFVEVDPGAIAMLIAAPIFAASDLCAKSLTRRESGPAVVAY 173
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
++ V + I + I L + + G K ++S + ++
Sbjct: 174 LSIIVTVVTFVPAMLVWKAPTIEEWGITIVIAGLATVGHLCMTQGFKVGEMSAIQAAKFL 233
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
L + + + I I++ + +
Sbjct: 234 QLLWSALIGYAMFAEAPGLYTWIGSAIIIASALFIAHRESRAR 276
>gi|156973081|ref|YP_001443988.1| hypothetical protein VIBHAR_00760 [Vibrio harveyi ATCC BAA-1116]
gi|156524675|gb|ABU69761.1| hypothetical protein VIBHAR_00760 [Vibrio harveyi ATCC BAA-1116]
Length = 284
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 94/276 (34%), Gaps = 10/276 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + L + + ++ + + +E +S + + R L SL + +
Sbjct: 2 SPHHLALLLLVIGNLAASLSDVAVKLIEGGISPFQYMFVRQLASLLLILPFYLRQQPDKR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK +++ + + V + + ++ P++ + L +FL
Sbjct: 62 SLKQAPITLLRAHLILIGSGCMMVA-------VTHLPLATANAVFYAAPILMLPLSILFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE +I+ L +L++ A+ +A A I V
Sbjct: 115 KEHPPLSKILLTCFGFLGVLVVLRP--DHFHWAALFALGTATTLAMFNILVRKLPSEQSV 172
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L LF + + G ++ + + +I + + ++A +
Sbjct: 173 VTTLWWTTLFSLPISAVLAGFYWQPMTGQELVLVIVSAVCILSYNGLAVLAYQKAPAGEI 232
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ EY+ + + + ++ + D + + ++V+
Sbjct: 233 ALAEYSGLVFVTLFGIWWFDEIPDWLTAVGILMIVL 268
>gi|16131530|ref|NP_418116.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. MG1655]
gi|89110353|ref|AP_004133.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|170083166|ref|YP_001732486.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|238902750|ref|YP_002928546.1| putative inner membrane protein [Escherichia coli BW2952]
gi|254038876|ref|ZP_04872928.1| transporter YicL [Escherichia sp. 1_1_43]
gi|256025609|ref|ZP_05439474.1| putative inner membrane protein [Escherichia sp. 4_1_40B]
gi|300950008|ref|ZP_07163958.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
116-1]
gi|300955349|ref|ZP_07167729.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
175-1]
gi|301028439|ref|ZP_07191685.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
196-1]
gi|301644327|ref|ZP_07244329.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
146-1]
gi|307140359|ref|ZP_07499715.1| putative inner membrane protein [Escherichia coli H736]
gi|331644379|ref|ZP_08345508.1| putative permease transporter [Escherichia coli H736]
gi|401589|sp|P31437|YICL_ECOLI RecName: Full=Uncharacterized inner membrane transporter yicL
gi|290509|gb|AAA62012.1| o307 [Escherichia coli]
gi|1790092|gb|AAC76683.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. MG1655]
gi|85676384|dbj|BAE77634.1| predicted inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|169891001|gb|ACB04708.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|226838841|gb|EEH70868.1| transporter YicL [Escherichia sp. 1_1_43]
gi|238862579|gb|ACR64577.1| predicted inner membrane protein [Escherichia coli BW2952]
gi|260447321|gb|ACX37743.1| carboxylate/amino acid/amine transporter [Escherichia coli DH1]
gi|299878550|gb|EFI86761.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
196-1]
gi|300317747|gb|EFJ67531.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
175-1]
gi|300450622|gb|EFK14242.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
116-1]
gi|301077365|gb|EFK92171.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
146-1]
gi|315138241|dbj|BAJ45400.1| putative inner membrane protein [Escherichia coli DH1]
gi|323934795|gb|EGB31177.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli E1520]
gi|331036673|gb|EGI08899.1| putative permease transporter [Escherichia coli H736]
gi|332345648|gb|AEE58982.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 307
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|309803337|ref|ZP_07697432.1| putative membrane protein [Lactobacillus iners LactinV 11V1-d]
gi|308164501|gb|EFO66753.1| putative membrane protein [Lactobacillus iners LactinV 11V1-d]
Length = 303
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 102/304 (33%), Gaps = 12/304 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ----FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ V + LWGI+ L + QVS + + R+L S +
Sbjct: 1 MKQQKKLWIFLVIISCNLWGISGLCAKRVFDLSTQVSPITITQIRMLISGLFLLLLAQLT 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+K + ++++ L F+ + + + F+ P +F
Sbjct: 61 GK--KPIKILYSRKNIIDIILYGLFGLIPIQLFYFIVVQKSNASIATILQFMGPFFIMFY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VF + L L I+AAL+ + ++ + H +SL+ V + + A
Sbjct: 119 MVVFEHQFLRRLDIVAALVAFMGIIFIATHGNFSKISLSPEVLFWGFLSALGVATNTLIP 178
Query: 195 GFF------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ A ++ + + L ++ L F
Sbjct: 179 RPLLKRMDSVTLIAWSMIATGLMMLIAYPSQILIPKDSRVIILLVVIIILGTILPFYCML 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K ST I++ P+ + SVF+ + + + +V++A++
Sbjct: 239 NSLRYIKPSTASILDAFEPISATLGSVFVFNLILKPIDWLGTILVILAVIAICYQPKSKM 298
Query: 309 GKNK 312
+
Sbjct: 299 KSIR 302
>gi|251793958|ref|YP_003008690.1| shikimate 5-dehydrogenase [Aggregatibacter aphrophilus NJ8700]
gi|247535357|gb|ACS98603.1| shikimate 5-dehydrogenase [Aggregatibacter aphrophilus NJ8700]
Length = 293
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/294 (19%), Positives = 123/294 (41%), Gaps = 6/294 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSL 80
+ G F A +L+G ++ L +S ++ +R++++LP V A+V F ++
Sbjct: 2 LKGVAFSLFASLLFGYMYYFSTLLLPLSGTDIFGYRIVFTLPFVAAAVVLFKQKAALMAH 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK + P V +F++ ++ F++A + SF Y + P++ V + K
Sbjct: 62 LKRIQERPLFVLAFIFTSALMGFQMWLFLWAPNSGSSISVSFGYLLLPLVMVVAARIIFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ ++ A L+ + ++ + G +S +V Y + +
Sbjct: 122 ERISRIKFFAVLIAAVGVISNIILKGE--ISWEASVICVGYTTYFVVRRILNMTDLAAFF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + F + + N + L+ GL++ + ++ +G
Sbjct: 180 LEMLLLLPFCIYFAWQVDIAQVQQSNPNILVLLLILGLISGTALNSYILASNHLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P LM+ S I + ID +F +VIAM++ + V ++ + T+
Sbjct: 240 LLGYVEPCLMVGVSFLI-GEEIDAQSYPLFICLVIAMLLIIADGVWHTKHSPTR 292
>gi|225569377|ref|ZP_03778402.1| hypothetical protein CLOHYLEM_05461 [Clostridium hylemonae DSM
15053]
gi|225162176|gb|EEG74795.1| hypothetical protein CLOHYLEM_05461 [Clostridium hylemonae DSM
15053]
Length = 294
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 85/286 (29%), Gaps = 6/286 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F+F +L+GI T+ E +SV ++ R +SL + + + LK
Sbjct: 10 IMFIFLQSVLYGIGNPVTKIAFESISVYWCLALR--FSLAFFVLMLFFGKKIIRELKSAR 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFL--TSFSYFVTPVISVFLGSVFLKERL 143
L +A ++V+ + V + + + +
Sbjct: 68 IMDCLPASLCMAAAYISVNLALKWTTATNVGFLMSLPVVLAPVLARVVLKTKYEWKHIPV 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L+ G + A A + K++ S+ L
Sbjct: 128 QAAVVAGLYLLCCGEEGFVFGKGEAFALITAAAVAGALVYGEKSLAGMSACTVSAAQAGL 187
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + G + + + + + + + TV +++
Sbjct: 188 TAV-ISLALAAGLEELHVDSVTPAAWGVVAYLAIGCTCIAYLLQNTAVAKISSQTVSMLQ 246
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ V S IL + + I ++++ ++ +
Sbjct: 247 TSQPVATAVFSFLILGELLTVRGYIGAAVILVCILAESVFARQGRR 292
>gi|254488323|ref|ZP_05101528.1| possible transporter, RhaT family, DMT superfamily [Roseobacter sp.
GAI101]
gi|214045192|gb|EEB85830.1| possible transporter, RhaT family, DMT superfamily [Roseobacter sp.
GAI101]
Length = 323
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 90/291 (30%), Gaps = 10/291 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + + + + + I ++ + + ++ + ++I + +V L
Sbjct: 34 HMDNLRGAILMVLSMLGFAIEDMFIKLMGSEIPIGQIIFILGVGGSLCFGSVMVAKKQPL 93
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ T+ V A++ S TP++ ++F
Sbjct: 94 FERAMLTPPIVLRALGEIIGTLGFV------SAIVLTPISSASAILQATPLVVTLGAALF 147
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L + + + A L+ + ++++ +L++ + + + +
Sbjct: 148 LGDPVGWRRWSAILVGLFGVILIIRPGMESFQALSLLAVLGVFGLSLRDLATRRVPKSTS 207
Query: 199 EMCVLAIPALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + G F F+ + + ++ +
Sbjct: 208 SFQLSFLAFAALIPASLVYMLGTGTSFTPMTGLQCAFMGAALAIGMVAYYGIVAAMRVGE 267
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+S V YT L +V + I + D + + I+V + + +
Sbjct: 268 ISFVTPFRYTRLLFAMVVGITIFGERPDMLTYVGATIIVASGIYTVWRERK 318
>gi|209694009|ref|YP_002261937.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
gi|208007960|emb|CAQ78093.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
Length = 289
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 104/280 (37%), Gaps = 10/280 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ PT M L + ++ ++ + + LE VS + I R L SL +F
Sbjct: 5 KPQISPTNMAILLLVLGNLMASLSDVAVKVLEGGVSPFQYIFIRQLVSLALIFPF----- 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + M A ++ + G + ++ + ++ P+I + L
Sbjct: 60 --WIKQPSAERQISNIKMTAIRAHVVLIGSGCMVVSITYLSLATANAIFYTAPLIMIPLS 117
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ LKE+ + +II L+ L +LI+ S AI +A A I +
Sbjct: 118 MLLLKEKPSTKKIIQTLIGFLGVLIILRPS--QFHWAAIFALGTAITLALFNILIRRIPS 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L L + +G ++ + ++ + + K+A
Sbjct: 176 EQSVITTLLWTTLLSLPVSGTLAFLYWQPLTLHAFFWVALSASCIITYNGLATMAYKKAP 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + + EY+ + +++ V+ + D++ + G+++
Sbjct: 236 ATQISLAEYSGLIFVVLFGVWWFDEVPDSLTLVGIGLIIF 275
>gi|188533309|ref|YP_001907106.1| Putative DMT Superfamily drug/metabolite efflux protein [Erwinia
tasmaniensis Et1/99]
gi|188028351|emb|CAO96212.1| Putative DMT Superfamily drug/metabolite efflux protein [Erwinia
tasmaniensis Et1/99]
Length = 303
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/278 (11%), Positives = 83/278 (29%), Gaps = 5/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFA----IVYFSGGLSLL 81
LF A ++W + + ++ + + +R L +L + + +
Sbjct: 3 FLFPLLAVLIWSVNAIVSKLSAAAIDPAAISFYRWLVALLVLAPFALPGVWRHRQQIKQS 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L +GM+++ + + + + ++ V+ ++ +
Sbjct: 63 WWKLLVLGLLGMVMYQSLAYYAAHSVSALFMGIVAALIPLLTVLLSVVVMRLAPTLGILL 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ L G+ + + V +Y + +
Sbjct: 123 GSLLSFFGLVWLVSQGEPAKILTQGLGKGEIMMFVASLSYALYGVLTRRWAIPLPNWQSL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I ++ F L L L + ++ G+ R S+ I
Sbjct: 183 WMQILFGVLLLTPNFLLATDVSLNAHNLPLVLFAAIPASIVAPFLWIQGVMRLGASSTSI 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ V +V L + + + I GI + +++
Sbjct: 243 YMNLVPIFTAVIAVSFLHETLHSYHFIGGGIALAGVIL 280
>gi|150388898|ref|YP_001318947.1| hypothetical protein Amet_1076 [Alkaliphilus metalliredigens QYMF]
gi|149948760|gb|ABR47288.1| protein of unknown function DUF6, transmembrane [Alkaliphilus
metalliredigens QYMF]
Length = 294
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 94/291 (32%), Gaps = 13/291 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + I+WG + + ++ L+ +S ++ R + +
Sbjct: 9 LALLMVTIVWGSSFILSKNTLDHLSTYNFLAIRFILAAALSSLVFY--------KNMRQI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + V IL + F L + F VI ++ LK+R ++
Sbjct: 61 NRTTLKYGVLIGLILFTAYAFQTIGLNYTTASKSGFITGFAVVIVPIFSALLLKQRPHNK 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----IPVGSSEGFFIEMCV 202
I+ + ++ L +TL + L I A+ FA + + +
Sbjct: 121 AILGVICAVIGLGFLTLDAHFALNIGDIYTLVCAFMFAFHILAVGKYTVKVDSIALGIIQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+A + ++ G T I L S + I + K + ++
Sbjct: 181 IATVGILSSIFTFSLESPIIPRGTEVWTSIFILAILATSGAYIIQNTMQKFTSPTHTALI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P+ + + + + + + +++ M++ + I K K+
Sbjct: 241 YTGEPVFAALFAYLLAGEILSSRGIFGSILILSGMMISEVDWAILFKKQKS 291
>gi|54301807|ref|YP_131800.1| putative permease [Photobacterium profundum SS9]
gi|46915227|emb|CAG22000.1| putative permease [Photobacterium profundum SS9]
Length = 298
Score = 67.6 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 92/286 (32%), Gaps = 13/286 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L + CA +L ++++ ++ + I R + + + +S
Sbjct: 8 TQHRRADLLIVCATLLASAGWIFSKQTIQGLPPFGFIGLRFVLASLLILPFCYRLFKQVS 67
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + + T + ++ +F ++ ++ +
Sbjct: 68 LKDIAQSSLVGMLLGAALLTWI-------YAISVSDTLGEGAFIMSLSMLLVPLVAWPLF 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSE 194
K++ + I+ I+ L++++L G +A A F +
Sbjct: 121 KQKPSRPFWISLPFAIVGLVLLSLSGGGWHQSVSQVWFLLAAALLALQFNFNSRYAQRIP 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + ++ + + F + S + + + G K
Sbjct: 181 TLLLTCVQLFVTGVVGLIASLMFEQWPQTVNIEIWGWFASSVLIATSIRYVLQTAGQKHT 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ I+ P+ + S+ + + + I +++ A+++Y
Sbjct: 241 SVANAAIIMVLEPVWTVFLSILWYGEKMPVEKVIGCSLILFALLLY 286
>gi|299769173|ref|YP_003731199.1| permease [Acinetobacter sp. DR1]
gi|298699261|gb|ADI89826.1| permease [Acinetobacter sp. DR1]
Length = 314
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 121/293 (41%), Gaps = 5/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G A + +G+ YTQ L Q+ + R++ ++P + + + + ++
Sbjct: 3 KGVSLSVMASVTFGVLYFYTQLLGQLDSEQTFGWRIIATIPFLTLFMWWSGDLAYIKNIY 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L P + +L+ ++ + +V F++ + +G S YF+ P++ V GSV E
Sbjct: 63 QRILAKPSLLLLLITTSVLTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++ Q +A +L ++ + G A+ + F + + G F
Sbjct: 123 KISKFQWVAIILAVIGVGHEIWRLGSIAWETALVAVGYSAYFLLRKKIKTDNLGGFWWDL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ +P Y+ G F+ L +IG G+L++ + + L G+
Sbjct: 183 VIILPIAIYLTHTGLL-PYSKFIDQPSLALIIIGLGILSAIGLGSYILASRFLPLVVFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ ++ +L + I + + A+ V +L ++ + K
Sbjct: 242 LGYLEPVLLALA-SLVLGESIGQEEWFTYIPIWCAVFVLVLEGAVHLYHQRQK 293
>gi|304316375|ref|YP_003851520.1| hypothetical protein Tthe_0898 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777877|gb|ADL68436.1| protein of unknown function DUF6 transmembrane
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 288
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 91/287 (31%), Gaps = 13/287 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++WG T + + + V + R L + + +
Sbjct: 9 IMLILVTVIWGSTFIIVKNATSVIPVYNFLFLRFLIAFIVLAILY--------GRRLVNI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K + V T+L + + F L + F V+ L + FLK +L+
Sbjct: 61 DRKTFIVSVLVGTMLFLGYAFQTLGLKYTTASKSGFISGFNVVLVPILEAFFLKAKLSKT 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ +L ++ LL++T + + A+ S +
Sbjct: 121 SRISVILAMVGLLLITTNVDLKINFGDFLTFLCAVSFAFQIVLIAKYAPSVDTISFATIQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + A + + ++ +F + + + I+
Sbjct: 181 ILVVATLSGILSFIYEKPTIPTNKTVWFALILTGIFATAFALTVQNTMQANTSATHAAII 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ +++ + + + I +++++M++ +P+
Sbjct: 241 FSLEPVFSAITAFLVAGEVMTLKSIIGGFLMLLSMILSEMPSKDKLR 287
>gi|219666794|ref|YP_002457229.1| hypothetical protein Dhaf_0729 [Desulfitobacterium hafniense DCB-2]
gi|19421866|gb|AAL87756.1|AF403182_1 unknown [Desulfitobacterium hafniense DCB-2]
gi|219537054|gb|ACL18793.1| protein of unknown function DUF6 transmembrane [Desulfitobacterium
hafniense DCB-2]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 85/270 (31%), Gaps = 4/270 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLE--VISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + A + + P++ ++ V + ++ R L + + F ++ GL + K
Sbjct: 4 GYVLIVLAALGFAALPIFIKYGYNVGLTTEVMLFLRFLIASVLLSFIMLVNKKGLHMNKS 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L G++ F ++ + A +T T V +F V L + L
Sbjct: 64 DLPKLVVQGLVFFGSSYCYTLAIKHMSASVTNILLYTYPLMVVLMATMIFKEKVSLVKAL 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--WSAYCFARKTIPVGSSEGFFIEMC 201
L L+++ ++ + H L L + + A + E I
Sbjct: 124 TLLLSFLGCLMVIDVIHTSTHQISMLGILYGIGSAIFYAIYNINGQYLSKTLEPVTISTY 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ +V + L L + G+ S I
Sbjct: 184 TSVVCLFATMVIYPPVNIFAGHSFQAMWIVGLGTAILSTIIPLFCYQKGVSLLGASQASI 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ P++ V + IL + + ++
Sbjct: 244 LSNIEPVIATVLAFLILGETLSVIQLSGAF 273
>gi|317505328|ref|ZP_07963256.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315663542|gb|EFV03281.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 294
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/289 (8%), Positives = 89/289 (30%), Gaps = 6/289 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + + +G PL++ + + ++ +R ++ + ++Y
Sbjct: 2 TDKSRLKGYVEAIISSATFGTIPLFSIPVLAAGMQISSLLVYRFGFACLMMMAVLIYNGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + +L + I ++ ++ + + + + V I
Sbjct: 62 SLRITFGEGLRLTFMSLLYAVSAICLINGYHYLPSGVATTLLFSYPVFTVILEIIFSHHR 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + +A + ++ +++ + L + Y P +
Sbjct: 122 LTFPVAFSIALAVAGVAMLSGIIVNGFDVNSSIGLLLELSSGLLYAIYMVAYPNMKIKRM 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI----GYGLLNSFVFCIFSYGIK 252
+ + ++ +S + I D + + +K
Sbjct: 182 GSLKTNFFMFFMAMIILALYSFFTMGHIQPIGDVHVFFYLLLLGCIPTTISNVTLVMAMK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++V + PL ++ + + +P+ F ++V A+ + +
Sbjct: 242 HIDSTSVATLGAFEPLTAMLIGILVFGEPMTWYVVAGFMMIVAAVYILI 290
>gi|312871079|ref|ZP_07731181.1| putative membrane protein [Lactobacillus iners LEAF 3008A-a]
gi|312872082|ref|ZP_07732157.1| putative membrane protein [Lactobacillus iners LEAF 2062A-h1]
gi|312873489|ref|ZP_07733539.1| putative membrane protein [Lactobacillus iners LEAF 2052A-d]
gi|312875346|ref|ZP_07735354.1| putative membrane protein [Lactobacillus iners LEAF 2053A-b]
gi|315653286|ref|ZP_07906209.1| DMT superfamily drug/metabolite transporter [Lactobacillus iners
ATCC 55195]
gi|325911287|ref|ZP_08173700.1| membrane protein [Lactobacillus iners UPII 143-D]
gi|325913574|ref|ZP_08175939.1| membrane protein [Lactobacillus iners UPII 60-B]
gi|311089180|gb|EFQ47616.1| putative membrane protein [Lactobacillus iners LEAF 2053A-b]
gi|311090998|gb|EFQ49392.1| putative membrane protein [Lactobacillus iners LEAF 2052A-d]
gi|311092375|gb|EFQ50744.1| putative membrane protein [Lactobacillus iners LEAF 2062A-h1]
gi|311093407|gb|EFQ51749.1| putative membrane protein [Lactobacillus iners LEAF 3008A-a]
gi|315489449|gb|EFU79088.1| DMT superfamily drug/metabolite transporter [Lactobacillus iners
ATCC 55195]
gi|325476847|gb|EGC80000.1| membrane protein [Lactobacillus iners UPII 143-D]
gi|325477153|gb|EGC80300.1| membrane protein [Lactobacillus iners UPII 60-B]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/290 (15%), Positives = 101/290 (34%), Gaps = 12/290 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ----FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ V + LWGI+ L + QVS + + R+L S +
Sbjct: 1 MKQQKKLWIFLVIISCNLWGISGLCAKRVFDLSTQVSPITITQIRMLISGLFLLLLAQLT 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+K + ++++ L F+ + + + F+ P +F
Sbjct: 61 GK--KPIKILYSRKNIIDIILYGLFGLIPIQLFYFIVVQKSNASIATILQFMGPFFIMFY 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
VF + L L I+AAL+ + ++ + H +SL+ V + + A
Sbjct: 119 MVVFEHQFLRRLDIVAALVAFMGIIFIATHGNFSKISLSPEVLFWGFLSALGVATNTLIP 178
Query: 195 GFF------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ A ++ + + L ++ L F
Sbjct: 179 RPLLKRMDSVTLIAWSMIATGLMMLIAYPSQILIPKDSRVIILLVVIIILGTILPFYCML 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ K ST I++ P+ + SVF+ + + + +V++A++
Sbjct: 239 NSLRYIKPSTASILDAFEPISATLGSVFVFNLILKPIDWLGTILVILAVI 288
>gi|229080226|ref|ZP_04212753.1| Transporter, EamA [Bacillus cereus Rock4-2]
gi|228703121|gb|EEL55580.1| Transporter, EamA [Bacillus cereus Rock4-2]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 88/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKT 187
+ER + I +++ + + L + A W Y +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S L + + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLLNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|219856339|ref|YP_002473461.1| hypothetical protein CKR_2996 [Clostridium kluyveri NBRC 12016]
gi|219570063|dbj|BAH08047.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 93/293 (31%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G+L +F A +WG + +++ LE VS + ++ R + +F + F
Sbjct: 10 KEKLIGSLCLFLAASIWGSMYVLSKYILEFVSPITLLWVRYAIAFVVLFVILRAF-QHKK 68
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K +K + + + + TPV V L
Sbjct: 69 RRKVVIKKGDWLLIAWIGFIGYFISIFMQFLGTQLSDAHTGALITASTPVFVVLFARFIL 128
Query: 140 KERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVG 191
KE ++I+ +L L ++I+ G +L A + +
Sbjct: 129 KEAFTRKKMISLVLATLGVVIVIGLDTMFLKHFLGNIVLVGAAVTWALLSVYVKVASKRF 188
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + A+ ++ L + + F +++ GI
Sbjct: 189 DSLIITTYAMLFALIFTTPLMLLQHENISFILYNRQFLLGILYLGVISTAAAFFLWNKGI 248
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + P+ + L + ++T I +++IA+ +
Sbjct: 249 ELMDAGMGSLFLFFQPVTGSILGWLCLGEQLNTGFFIGGILIIIAVFIASKDE 301
>gi|260803187|ref|XP_002596472.1| hypothetical protein BRAFLDRAFT_103212 [Branchiostoma floridae]
gi|229281729|gb|EEN52484.1| hypothetical protein BRAFLDRAFT_103212 [Branchiostoma floridae]
Length = 315
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/302 (12%), Positives = 90/302 (29%), Gaps = 19/302 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + ++ L+ + + + LE+ R L I+Y L +
Sbjct: 19 LGLVCALVSTLFFSLSSLFVKLVWDLHPLEITLFRCAAQLVCALPPIIYKKLPLVPEDTS 78
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ AV YA + F +P+ + LKE
Sbjct: 79 PRLYLLGR-----GVFGAVALCMQFYAFHHIPLGDATTVIFSSPIFIALFAWLILKESYG 133
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAI--------------AVTWSAYCFARKTIPV 190
+ L + +++++ S I + + + +
Sbjct: 134 WFNFVVTLTTLTGVVLISKPSFIFGSVVGVPNTTEHLLGTLSAFGGAVFSALALVMIRKL 193
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + F + + L++ + + GE D +LI GL +
Sbjct: 194 GKTVHFLVHITYLSVFGMILTFVLLVAFGEFRMPPCGSDRYYLIALGLCGVGGQTFLTKA 253
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ K + V I+ + L + + G+V+ + + + + +
Sbjct: 254 FQLEKAAPVAIVRTMDIVFAFTWQFLFLGEIPAPLSVGGAGLVMSSAIAIAVKKCLAERQ 313
Query: 311 NK 312
+
Sbjct: 314 KQ 315
>gi|229060714|ref|ZP_04198070.1| Transporter, EamA [Bacillus cereus AH603]
gi|228718585|gb|EEL70215.1| Transporter, EamA [Bacillus cereus AH603]
Length = 312
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFIMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L ++ F+ ++ S ++P+ + L +
Sbjct: 69 RIERKDWLR-----LLAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 124 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYDYAWLGNVIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIIFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 244 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 303
>gi|302345521|ref|YP_003813874.1| hypothetical protein HMPREF0659_A5794 [Prevotella melaninogenica
ATCC 25845]
gi|302149030|gb|ADK95292.1| putative membrane protein [Prevotella melaninogenica ATCC 25845]
Length = 307
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 103/287 (35%), Gaps = 5/287 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL--EVISHRVLWSLPGVFFAIVYFSGG 77
+ T+ G + + I +G PL++ + + +L V+ +R + + +++
Sbjct: 3 NSSTIKGYGYASLSAITFGTIPLFSIPVMESGMLLPSVLIYRFAFGCLFMMVILLWRKQN 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + +L + + ++ + + + +I F +
Sbjct: 63 LHIRWGDGLRITFLSILYAVSAVCLFSSYEYMPGGIATTLLFSYPVWTEILLILFFNEKL 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS--LAIAVTWSAYCFARKTIPVGSSEG 195
++ L L IA + + + + ++ ++ + ++ Y + +
Sbjct: 123 TIRISLAILLAIAGVAFLGGIGHTDGIKSMWGVTLAMSSGLLYAIYMVLFPHMRIRKLPA 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI-PDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + L +++ F+ G + N ++ + + +
Sbjct: 183 LKVNFYIFFMAMLLLILYATFTTGGVQRITNADSFLSLILLGLIPTTISNVTLVRSLTLI 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++V I+ PL + + ++ +P+ T I +++ ++++ +
Sbjct: 243 DSASVAILGAFEPLTAMTIGITLMGEPLTTSIIIGCVLIITSVIILI 289
>gi|240102472|ref|YP_002958781.1| Membrane protein, putative transporter [Thermococcus gammatolerans
EJ3]
gi|239910026|gb|ACS32917.1| Membrane protein, putative transporter [Thermococcus gammatolerans
EJ3]
Length = 364
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/274 (13%), Positives = 84/274 (30%), Gaps = 15/274 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A +WG T + L + + +R + + +
Sbjct: 87 ILLGITA--IWGSTFPVMKVSLNYSEPMTFLVYRFGIASLLMLLI----------FRRRT 134
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
L + GF I L ++F + V + F+ L ER+
Sbjct: 135 LRWSTFWRGFVLGVTLFLGHGFQIVGLKYTTPSNSAFITSLYVVFTPFVAYFILGERIRR 194
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIA--VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + LL +L L +++ S + S G ++ + +
Sbjct: 195 RDVESLLLALLGLYLISGASLKFNYGDLLTVLCAVSFAFQIVLVERFGENDYLSLSFWQI 254
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ +G + ++P L F + K K ++
Sbjct: 255 FWNFILSTLYITITGELTLWRNSVPWLGALYTGAFATVLAFTLQIKYQKYIKAYRAALIY 314
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
T P+ ++S+ + +P+ + +++ A+
Sbjct: 315 STEPIFGHIASLLVFGKPLSPEGYLGALLILGAI 348
>gi|229058457|ref|ZP_04196841.1| Transporter, drug/metabolite exporter [Bacillus cereus AH603]
gi|228719966|gb|EEL71556.1| Transporter, drug/metabolite exporter [Bacillus cereus AH603]
Length = 321
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 95/300 (31%), Gaps = 17/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + V LWG++ Q L E VS +++ R+L S + + +
Sbjct: 1 MDSNRLKEIIMVVIGACLWGLSGTAAQQLFQYENVSTEWLVTIRLLISGAILLIMSSFGA 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + A +++F + + ++ + + ++ P+
Sbjct: 61 NKKEIFGIWKQKSDANKIILFGLLGMLAVQYTYFASIKEGNAAVATLLQYLAPIFITVYL 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKT 187
R + + I+ L ++ ++ + + ++ ++ A+
Sbjct: 121 LFKWSVRPSKIDYISITLSLVGTFLLLTNGSVHNLAVSTPAIIWGILSGLSLAFYSLYSK 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ I + I + + + S E L + + +F
Sbjct: 181 ELLEKWSSSVIVGWGMIIGGIGVTILHFISTNEFILLSTMKYVKLSTLPLITFVVIFGTL 240
Query: 248 SY------GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 241 IAFYLYLDSIRYLTPKETTLFGCTEPLAAIISSVLILHVPFQSFQLLGAFCVIVMVLILS 300
>gi|294817675|ref|ZP_06776317.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|326446621|ref|ZP_08221355.1| hypothetical protein SclaA2_36382 [Streptomyces clavuligerus ATCC
27064]
gi|294322490|gb|EFG04625.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
Length = 331
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 80/290 (27%), Gaps = 14/290 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+A +LW + + E S + R+L + ++
Sbjct: 9 SADRARWTALAAAGVTVVLWASAFVSIRSAGESYSPGALALGRLLAGALALGCVLLIRRE 68
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
GL + V V+ + + + P++ LG+
Sbjct: 69 GLPPRAAWPG------IGVSGLLWFGVYMVVLNWGEQEVDAGTAAMIVNIGPLLIALLGA 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIP 189
L E L I ++ + + + L IA A +
Sbjct: 123 RLLGEALPPRLIAGMVVSFVGAVTVGLSMSGDGSASVLGVFLCLIAAVGYAGGAVAQKPA 182
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + A+ + + G E + + + ++Y
Sbjct: 183 LKHASALQVTAFGCLTGAVLCLPFTGQLVAEAGQAPLSATLNMVYLGVFPTALAYTTWAY 242
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ R +G Y P L+++ S +L + + + + + + V
Sbjct: 243 ALARTTAGRMGATTYAVPALVVLMSWAVLDEVPGPLTLLGGVLCLAGVAV 292
>gi|218675877|ref|YP_002394696.1| Transporter, drug/metabolite exporter family [Vibrio splendidus
LGP32]
gi|218324145|emb|CAV25342.1| Transporter, drug/metabolite exporter family [Vibrio splendidus
LGP32]
Length = 334
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 81/290 (27%), Gaps = 1/290 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +WG + L+ + + +I RVL++ + Y LS
Sbjct: 42 FLKLILLAAIWGGSFLFMRMAANPLGPAVLIEARVLFAALTLLLVSFYLKKKLSFHDHAK 101
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L + + A T+ + ++ K L
Sbjct: 102 HFFILGLFNTTLPFLLFAYAAQTLNASTLAILNSTAPIWAAIIGAIWTKTALEAKVLLGL 161
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + +++ M + L A + +Y A F
Sbjct: 162 GIGVTGVGVLVGWDAMNIGREAMLPIFAAVMAAFSYGIASNYTKQAPKVEAFNNAHGSMW 221
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ V+ F T ++ + + ++ + + + +
Sbjct: 222 AAVLLVLPFVFFIPMRETPDVTITTSVILLGAVCTGLAYLLYFNLVSELGAPSALSVTFI 281
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P+ I+ L + I + +V+ ++ + + K +K
Sbjct: 282 IPVFGILWGNLFLDEAIGINTIVGSILVITGTMLVTGMSPMKMLKAARQK 331
>gi|209517351|ref|ZP_03266194.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
H160]
gi|209502234|gb|EEA02247.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
H160]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 74/294 (25%), Gaps = 9/294 (3%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---LKDTL 85
+ A ++WG + + L+ + R L V IV +
Sbjct: 1 MLIAAMIWGSAFVAQRLSLDMIGPFLFTGLRFLLGALVVLTMIVCVRRPALAELTKRAPG 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +G +LAV L + F + VI LG +F
Sbjct: 61 GARELLGAGTLLGVVLAVSISLQQIGLQYTKIANAGFISSLYVVIVPLLGVLFRHRT-GL 119
Query: 146 LQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ ALL L + ++ + + + +
Sbjct: 120 GTWLGALLAALGMYFLSVDEHFSMLYGDWYQLAGALVISAQMMLVGRFAARHDTLMLALV 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + G L + I + A S +
Sbjct: 180 QFVTCGLVCLAIGLAVEPVSAAVIARAAPTIAYGGALSVGVAYTIQVVAQRYAAPSHAAV 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ + + +L + + +++ ++V + + + +
Sbjct: 240 IFSMEGVFAAFAGWLVLGETLAARALFGCALMLAGLIVCQVLPGWKRARQRAAQ 293
>gi|153005255|ref|YP_001379580.1| hypothetical protein Anae109_2394 [Anaeromyxobacter sp. Fw109-5]
gi|152028828|gb|ABS26596.1| protein of unknown function DUF6 transmembrane [Anaeromyxobacter
sp. Fw109-5]
Length = 281
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/271 (11%), Positives = 67/271 (24%), Gaps = 14/271 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + A +LW + + ++ R L + + + +L
Sbjct: 6 LLILAAAVLWSTAGAAIKS-SGLDAWQIAGGRSLVAGLFLLAVVRETRRLPTLRVLL--- 61
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ A F+ A F P+ + L + L+E +
Sbjct: 62 ---------VSVAYAFTVVMFVVATKLTTAANAIFIQDAAPLFVLVLSPLLLRELPTRGE 112
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
++A + L L + L V + +I L
Sbjct: 113 LLAVPVYALGLGLFFLDELSAGQVTGNLVALGSGVAFAFSIIGLRLLRHDGPAA-LVYGN 171
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + L + + FS G+ ++ P
Sbjct: 172 LIAAAATLPLALAGPAPTPLDVGLVVYLGVFQLGLAYLCFSRGLLHTPAVEASLLMLLEP 231
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+L + + + + +V+ A
Sbjct: 232 VLNPIWTFLVAGERPGPWALAGGAVVLAATA 262
>gi|21233060|ref|NP_638977.1| hypothetical protein XCC3631 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66770000|ref|YP_244762.1| hypothetical protein XC_3702 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188993211|ref|YP_001905221.1| hypothetical protein xccb100_3816 [Xanthomonas campestris pv.
campestris str. B100]
gi|21114911|gb|AAM42901.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575332|gb|AAY50742.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167734971|emb|CAP53183.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
Length = 302
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 98/298 (32%), Gaps = 9/298 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
A + ++ A + + + L L+V R SLP V +
Sbjct: 4 TAPAPRSPLPAIAWMVAAVACFSLMDAGMKLLSASYPPLQVTLLRGAASLPFVLVWVFAT 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+G +++ P G+ + + V G F+Y L YFV P++ L
Sbjct: 64 AGPRAII------PVRWGLHLLRGVLGMVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAAL 117
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L E + + A + ++ ++++ + + V +A +A I V
Sbjct: 118 SVPLLGEHVGPRRWTAIAIGLVGVIVVLRPGVNGLISLPGLMVLLAATAYAIAAITVSLL 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ LF + G + + G GL + + R
Sbjct: 178 TRTDTPQAMVVWFLLFMAIGAGLLAVPDWVPLRAEHAWLIAGMGLAGALGQVALTQAFMR 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
+ S + +EYT + +I + + D GI+V + + + + +
Sbjct: 238 GEASMIAPLEYTGLVWVIGWDWLLWQTLPDAWTWTGAGIIVASGLYLLRRERIRQADR 295
>gi|323485111|ref|ZP_08090464.1| hypothetical protein HMPREF9474_02215 [Clostridium symbiosum
WAL-14163]
gi|323401667|gb|EGA94012.1| hypothetical protein HMPREF9474_02215 [Clostridium symbiosum
WAL-14163]
Length = 302
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 95/276 (34%), Gaps = 13/276 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L A +G + + ++ E+ R + + + + L +
Sbjct: 10 LMNITAMAAFGTLGYFVAKI-PLASEEIAFFRAVIAAVVILAWQLVRGRKFRL----PAS 64
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K++ +L+ S ++ +W F A + + SY+ PVI + + +ERL+ Q
Sbjct: 65 RKSLILLMASGAMIGFNWIFLFEAYHYTSVSVATLSYYFAPVIVMAACPLLFRERLSLKQ 124
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFFIE 199
II L+++ G+ S + A A G
Sbjct: 125 IICFACSTAGLVLVISSGGLEGGSSNVTGVGYGLGAAVLYACIILINKSLTGIDGIDRTL 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L + + SG G + L+ + +C++ + K
Sbjct: 185 LQFLVGLIVMFPYVLFKSGFHVMEAGTVGIMNLLVLGVVHTGIGYCLYFSSLGDLKGQEA 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
I+ Y P++ V SVF++ + + ++ +++
Sbjct: 245 AILSYIDPMVACVMSVFVMGEAMGLMQAAGGVMILG 280
>gi|260576993|ref|ZP_05844974.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
gi|259020835|gb|EEW24150.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
Length = 314
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 94/302 (31%), Gaps = 15/302 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +L + A LWG L + L V + + R ++P + + +
Sbjct: 10 NHSRRASLLLLMAAFLWGSGNLANKTILSDVDPVCAVFLRSSIAVPALLWPVW------- 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + + A+ + T SF + V++ LG +F
Sbjct: 63 RERLRPRPEGWLRSVGPGSLMFALALLTQQWGYQTATVTNASFLVNASCVLTPVLGVLFW 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
++RL +I+A+L+++ L+M+ L A+ +S +
Sbjct: 123 RDRLQGRTVISAVLVLMGALLMSGAWWSLATVNTGDALCLVSALFYSFWIILIGRHLERF 182
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ AL V L + F + +
Sbjct: 183 PTPAATTLAQCLCAALISVPLVLAGDPVAPQDWWGAMPEALYLGLFSTAAAFALTAAAQT 242
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R ST I+ L + + L + + G+V+ A++ L K +
Sbjct: 243 RVSASTAAILVSAESLFGGAAGIVFLAERPAPAALLGGGLVLAAILTMALRPEPIRAKLR 302
Query: 313 TK 314
Sbjct: 303 LA 304
>gi|296125918|ref|YP_003633170.1| hypothetical protein Bmur_0872 [Brachyspira murdochii DSM 12563]
gi|296017734|gb|ADG70971.1| protein of unknown function DUF6 transmembrane [Brachyspira
murdochii DSM 12563]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 92/291 (31%), Gaps = 19/291 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++WG+T + T+ L S +E++ R + +
Sbjct: 4 NQKTKAYAGTIFSVLIWGVTFISTKILLNDFSPIEILLSRFVLGFILLMIIY-------P 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ T + +++ F AL V P+ + S+ L
Sbjct: 57 KNNKIYSKKEEALFAAAGITGITLYYLFENMALNYSLASNVGILVAVGPLFTGIFSSLIL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
KE+L II + I+ + ++T + L + +S +
Sbjct: 117 KEKLRINFIIGFIFAIVGISVITFNGKFILKINPLGDMLAILAAVMWGIYSVLIKMIGDM 176
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S I + + + GF ++ I FL + F ++
Sbjct: 177 GFHSVTITKKTFMYGIIFMIPIMFFMGFDVNISDYIKPINIINFLFLSFAACTLCFIAWT 236
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y K Y P++ +++S IL + I I ++++ +++
Sbjct: 237 YSTKILGAVKNNTYIYFIPIITLIASKIILNENITIFALIGVVLILLGVII 287
Score = 36.0 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 33/99 (33%)
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L +++ + + LF + + + + + S VGI+
Sbjct: 44 FVLGFILLMIIYPKNNKIYSKKEEALFAAAGITGITLYYLFENMALNYSLASNVGILVAV 103
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
PL + S ILK+ + I F ++ + V
Sbjct: 104 GPLFTGIFSSLILKEKLRINFIIGFIFAIVGISVITFNG 142
>gi|227824590|ref|ZP_03989422.1| drug:metabolite exporter [Acidaminococcus sp. D21]
gi|226905089|gb|EEH91007.1| drug:metabolite exporter [Acidaminococcus sp. D21]
Length = 293
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 88/293 (30%), Gaps = 12/293 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ MGTL V + +WGI+ + Q+L Q+ +I+ R + + ++ ++ G
Sbjct: 1 MTQTMGTLIVLLSTGMWGISGVCGQYLFEHTQIDSTWLIAVRQILAGL-MYMMVIVQRGK 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + ++F L F YA+ + + PV V +
Sbjct: 60 EPLFAIFRAQRQTLWKMLFFTLGLLGSQYGFYYAIKLSNAPTATVLIYTAPVFVVLQQVL 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIP 189
+ + + ++ + +++ H L ++
Sbjct: 120 MQHRPVEKKEAVGIFTALMGVFLVSTHGNPTSLVISPAALFWSILSAIAMTLYTVAPAHI 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ ++ + + F ++
Sbjct: 180 LKEYSSPYLMGWGQLLSGFILLPLCNPFHSGVESWTFFSIGAMGYIIVFGTVVPFLMYFN 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G+K ++ + PL ++ SV L + + +V +V+ L
Sbjct: 240 GLKVIGPVKASLISCSEPLCSVLFSVAFLGTFLALPDYLGVVCIVGTVVMLSL 292
>gi|14590489|ref|NP_142557.1| hypothetical protein PH0593 [Pyrococcus horikoshii OT3]
gi|3256999|dbj|BAA29682.1| 284aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 284
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 84/280 (30%), Gaps = 13/280 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T L + +WG T + ++ + I+ R + + +
Sbjct: 6 ETRKAELILLGLSAIWGTTFPVMKIGIKDFPPVSFIAFRFFLASIILAIVL--------- 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L +GF + L ++F + V + F+ LK
Sbjct: 57 --KDKITKDQIFPGFLIGLSLFAGFGFQVVGLKYTTASNSAFITSLYMVFTPFVAFALLK 114
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-FARKTIPVGSSEGFFIE 199
++ + +A + +L +++ S + + + F I G +
Sbjct: 115 SKITRVDALALAIAVLGTYLISGASLNLSYGDLLTILAALSFAFQIVLIEYYKDLGLGLA 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +F +V++ + L + + F + +
Sbjct: 175 FWQIFWNFIFSLVYSIYFESLPLPKEGSTVFAILYTGIVATALAFLGQVKYQPKIESHRA 234
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P+ S IL + + + ++++A+ +
Sbjct: 235 AVLYSAEPVFGYFFSFLILGEILPFEGYVGAFLILVAIWL 274
>gi|169634368|ref|YP_001708104.1| hypothetical protein ABSDF2955 [Acinetobacter baumannii SDF]
gi|169153160|emb|CAP02245.1| putative membrane protein [Acinetobacter baumannii]
Length = 308
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 90/300 (30%), Gaps = 22/300 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLE----VISHRVLWSLPGVFFAIVYFSGGLSL 80
+G+ F C+ L+ ++ + +S L +++ R+L +LP +
Sbjct: 10 IGSFFALCSAFLFSTKAIFIKQTYALSPLVDGTVLMALRMLSALPFFLLICWFNRHH--- 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+K + ++ +L+ L F+ P ++V S+ K
Sbjct: 67 -NQGIKKKDWLILIFAGLLGYYFASWLDFMSLMFISASLERIILFLYPTLTVIASSLLYK 125
Query: 141 ERLNHLQIIAALLIILSLLI--------------MTLHSGIPLLSLAIAVTWSAYCFARK 186
++L+ + A L ++ L + S +
Sbjct: 126 QKLDVKSLFAIFLSYGGTVLVMLQEHNNATIQGKFWLGTSFVFASALAFAGYLLLTPPLI 185
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ Y + L + + L+ +
Sbjct: 186 KKFGSWNFTGLALTVACIGTLTHYTLSTSHPFQLLLQLPSSVIWYGIGLGFLVTVLPTVM 245
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I+R S ++ P+L I+ +V L + ++ + + + +I +++ L
Sbjct: 246 LMQSIERLGASQSAMIASIGPVLTILLAVAFLNEHLNIWQWVGCFLNIIGVMMITLRKKK 305
>gi|307323450|ref|ZP_07602660.1| protein of unknown function DUF6 transmembrane [Streptomyces
violaceusniger Tu 4113]
gi|306890939|gb|EFN21915.1| protein of unknown function DUF6 transmembrane [Streptomyces
violaceusniger Tu 4113]
Length = 339
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 80/300 (26%), Gaps = 12/300 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G+L V A +LWG T F V L + + + +
Sbjct: 15 GSLCVLAASVLWGTTGTAATFAPGVGPLAIGAVAMGLGGLLQALVAAPSVVRQAPRLRAR 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +G + LA + + + + + VI + L R
Sbjct: 75 RGTVLLGAFAVAVYPLAFYSSMHLAGVAVGTVVSIGMAPLASAVIERVMDRRRLTRRWTL 134
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW------------SAYCFARKTIPVGSS 193
+ L ++ ++A T A +
Sbjct: 135 GAALGLLGTLMLCAAQAAQDPGDRGQPSMAATMLGVGLGLIAATTYALYSWAAHRLITHG 194
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
M + +V G + + + +F +G+
Sbjct: 195 ISSRAAMGAVFGLGGVLLVPVLLVTGAPLLDSGSNMAVGAYMAVVPMFAGYVLFGWGLAH 254
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
ST + P + V +V ++ + + V +V+ + V PT ++ + +
Sbjct: 255 VPASTATTLSLLEPAVAAVLAVLVIGERLPAVGWTGIALVLACLAVLTAPTAVSRRRRQR 314
>gi|297161481|gb|ADI11193.1| hypothetical protein SBI_08075 [Streptomyces bingchenggensis BCW-1]
Length = 326
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 88/290 (30%), Gaps = 5/290 (1%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + W + + ++ L + V +V + +
Sbjct: 15 AATFSVLAWASAFVSIRSAGAAYSPGALALGRLLAASVVLVILVAIRREGLPPRGAWRGI 74
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
G++ F ++A++WG + T + + + + LG L + +
Sbjct: 75 LVSGVVWFGGYMVALNWGERLVDAGTAALLVNVGPILMALLAARLLGEALPPRLLAGMAV 134
Query: 149 IAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+++ L + H G ++ +A A + +G I
Sbjct: 135 SFGGAVVVGLSTSSGHEGGTSVLGVVLCLLAAMAYATGVVAQKPALGYGTPLQITAYGCL 194
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + + + G E L + + F ++Y + R S +G Y
Sbjct: 195 VGTVACLPFAGQLATELPDAPTSATLNMLYLGVVPTALAFTTWTYALARMPASKLGATTY 254
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P ++++ S L + + + + + + V +++
Sbjct: 255 AVPAIVVLLSWAFLDEVPAWLTLLGGALCLTGVAV-SRSGPRAPRESRAS 303
>gi|281421891|ref|ZP_06252890.1| integral membrane protein [Prevotella copri DSM 18205]
gi|281404133|gb|EFB34813.1| integral membrane protein [Prevotella copri DSM 18205]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 81/284 (28%), Gaps = 17/284 (5%)
Query: 28 LFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F +WG T + T+ L +S ++ + R + + + D+
Sbjct: 12 LVAFITVAIWGTTFVSTKVLMLNGLSPAQIFTLRFSIAYMMMLMV-----NHKRMFADSW 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + ML + L T + R+N
Sbjct: 67 KDEFKMAMLGITGGSLYFLSENEAMNYTTTTNTSLIVCSCPLFATLLVRLVYRHSSRINM 126
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+Q++ +LL + ++I+ L+ L + + + + + I
Sbjct: 127 IQLLGSLLAFVGMIIVVLNGRFVLHLSPVGDALAFTACMSWAVYSLLMKSVSGDYGAAFI 186
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLI----------GYGLLNSFVFCIFSYGIKRAK 255
+ + + P + L + F +++ I +
Sbjct: 187 TRKVFFYGVLTILPYYLIIPGWPSWDVFMKPQVVGNLLFLGCLASMICFLTWNWCISKLG 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P+ ++ + +L + I ++ M +
Sbjct: 247 AVKATNWVYFNPITTMIFASLVLDEKITPYFLAGACCILAGMYI 290
>gi|113866247|ref|YP_724736.1| integral membrane protein [Ralstonia eutropha H16]
gi|113525023|emb|CAJ91368.1| integral membrane protein [Ralstonia eutropha H16]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 95/298 (31%), Gaps = 11/298 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ P G + A +L G + L+V+ R L+ + + G
Sbjct: 2 PSQQPLPGGAWRMVAAMLLSGTIGWFV-VTSGQPPLDVVFFRCLFGGAALLGVLTLQRGW 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + L L ++W A + + Y P + L SV
Sbjct: 61 VRMSRAQLGWLAL------GGVTLVLNWLALFSAYAYSGIAIATVVYHTQPFFLLLLTSV 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTL----HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+E ++ +L ++++T +G +L+ +A +A T+
Sbjct: 115 IQREPFPFARLPWLVLAFAGVMLITGLEHGATGTAMLAGIGLGLLAALLYAVTTLATRRL 174
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L ++ + G L + ++ + +R
Sbjct: 175 QAIPPGQIAGLQMVLGVLMLAPLAHPAAGSYGTGTWAALLALGLVHTGVMYTLLYGAFQR 234
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ + + PL+ IV V + + ++ +V++ +V L + +
Sbjct: 235 LNVVSIATLSFIYPLVAIVIDVMVFGVVLGPLQIAGMALVLLGVVANQLGWSLPLRRR 292
>gi|146299489|ref|YP_001194080.1| hypothetical protein Fjoh_1729 [Flavobacterium johnsoniae UW101]
gi|146153907|gb|ABQ04761.1| protein of unknown function DUF6, transmembrane [Flavobacterium
johnsoniae UW101]
Length = 301
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 84/289 (29%), Gaps = 18/289 (6%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ I+WG T L + +E + V S R + + +++ + + L
Sbjct: 10 IFALAAVGIIWGTTFLGIRVAVETIPPWFVTSIRQGLAGIIMMIILLFKKELKWIGWENL 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + ++ + GF A T L S + P++ +F ++ +
Sbjct: 70 KHQLVPSI-----LMIVIANGFTTVAEQTVPSGLASVISAMAPILIFLGSILFKLQKPSL 124
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I ++ ++ + + + A +
Sbjct: 125 RGFIGVIIGFSGVVFIFKDGLGSFLDADYRIGMMFMGFAITAWAAGTIYTKLHGNKSKNI 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+A + + + L + F ++Y +K
Sbjct: 185 VLNLFYQFTMASCIQIVLAFIFSPTIDVNLWSTKSIFAALYLSIFGSVIAFFSYNYALKH 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
V I+ Y ++ + IL + I I ++++ + +
Sbjct: 245 VTPVQVSILAYINTIIAVFFGWLILDEKITIDFIIATILIILGVFIINY 293
>gi|52144499|ref|YP_082329.1| DMT family permease [Bacillus cereus E33L]
gi|196046743|ref|ZP_03113966.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|225862804|ref|YP_002748182.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|51977968|gb|AAU19518.1| permease, drug/metabolite exporter family [Bacillus cereus E33L]
gi|196022455|gb|EDX61139.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|225790240|gb|ACO30457.1| transporter, EamA family [Bacillus cereus 03BB102]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 285
Score = 35.7 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|71908441|ref|YP_286028.1| hypothetical protein Daro_2828 [Dechloromonas aromatica RCB]
gi|71848062|gb|AAZ47558.1| Protein of unknown function DUF6, transmembrane [Dechloromonas
aromatica RCB]
Length = 294
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/288 (8%), Positives = 74/288 (25%), Gaps = 17/288 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + + L R + + + + L
Sbjct: 9 YLLLTLTVLSWSGNMVIGRGVRGDIPPLTFAFWRWVIAFALILPLALPHLKTQWPLLKKG 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P V L+ AL + P+ ++ + FL + L
Sbjct: 69 WKPLLVLGLLGVGGYNTFA----YLALQDTTATNAALLNSFIPIATIAISWAFLGKHLRR 124
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++ I ++ + + + G + +A+
Sbjct: 125 IEGIGVVVSLCGAMTIISRGDIAVLAHLNLNVGDVWMLVAVLDWAIYTVALAWRPAGVHP 184
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ + AL + G + + + + ++ G+
Sbjct: 185 MLMLGATTIIGLSALAPAYAWEMAQGRVMNIHFGSLSALAYVGIFPSFLGYIFYNKGVAE 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + + P+ + S L + + G++ + +
Sbjct: 245 VGPNKASLFIHLMPVFGTLLSFLFLGEIPFWYHYLGIGLIFTGIWLTT 292
>gi|333028476|ref|ZP_08456540.1| putative integral membrane protein [Streptomyces sp. Tu6071]
gi|332748328|gb|EGJ78769.1| putative integral membrane protein [Streptomyces sp. Tu6071]
Length = 333
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/308 (7%), Positives = 68/308 (22%), Gaps = 41/308 (13%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MG + + +G + + + L + L V+ RV + +
Sbjct: 1 MGLGLALVSALAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVLLPVAWRHRALPRTRP 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L + +A + A+ + ++ P + + +
Sbjct: 61 AL--------LLGYGLFAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRP 112
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI---- 198
++ +L + L + + + V S G
Sbjct: 113 VSRAATAGVVLAVGGLACVVEVWAGLRFDALGLLLALGAACCQVGYFVLSDHGTEPASPA 172
Query: 199 ---------------------------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+ E L
Sbjct: 173 EPAGRTGPAQEPPSPLGVIAYGLLVGAVVLTFVARPWGMDWSVLGGRAEMDGTPVAAFLL 232
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ + ++ ++ ++ V + +L + + +
Sbjct: 233 LAWIVLVATVVAYATGVVSVRGLSPQVAVVVACLEAVVATVLAWVLLGEHLSPPQLAGGC 292
Query: 292 IVVIAMVV 299
+V++ V
Sbjct: 293 VVLVGAFV 300
>gi|327395190|dbj|BAK12612.1| carboxylate/amino acid/Amine transporter [Pantoea ananatis AJ13355]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 88/295 (29%), Gaps = 6/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + V + ILW + + + ++ +++ R L++ + + +
Sbjct: 8 SRHTLGLIMVCLSAILWSSAGFFVRMI-DMNTWAMVAWRSLFAFLSLILLLAWGGYLRRF 66
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +A ++A+ ++ AL Y P ++ LG +
Sbjct: 67 SFCND----VGLKGLITAAVMAISMFCYVAALKLTSVAGVMTVYATIPFFAMGLGWLIQS 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + +I+A + ++ +++M SG + FA + G +
Sbjct: 123 KEITKRALISAAVSLVGVVVMAASASGTGDTAGNALALIMTAGFAASIVMSGKWPEMNLP 182
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
AL G + S + +F G + +
Sbjct: 183 AVTALACALCGAFCVAMMPQGLPVPGMHEILWLIAFAMSTQSISYLLFMAGSRHLDPAEA 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ +L + + + I +A+ YL + K
Sbjct: 243 SLIAQADIVLGPMWVWVFFSELPANNTLLGGAITFVAVTGYLAGEYYLKRNSARK 297
>gi|325300005|ref|YP_004259922.1| hypothetical protein Bacsa_2919 [Bacteroides salanitronis DSM
18170]
gi|324319558|gb|ADY37449.1| protein of unknown function DUF6 transmembrane [Bacteroides
salanitronis DSM 18170]
Length = 314
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 96/315 (30%), Gaps = 23/315 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G + CA +WG+ +F+ VS L V RV ++ + +
Sbjct: 1 MDTQKLKGHGAMLCANAMWGLMSPLAKFVMAGGLVSSLVVTDLRVFGAMLLFWIVSFFRK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + V S + + G FI+ + S P+ ++ L
Sbjct: 61 ------PEHVGHKDLAKLFVASLLAIVFNQGCFIFGVGLTSPADASIITTSMPLWAMVLA 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------------AY 181
++FLKE + +++ L++ + S + +
Sbjct: 115 AIFLKEPITGKKVLGIAFGAGGALLLIMGSSHSGAAAENPYSLWGDLLVLTAQLSYAFYL 174
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ + S M A L +N LG L
Sbjct: 175 VLFKDFVSKYSVFTIMKWMFTYAFICLLPFSYNDLLAAGWESLGWAEAGSLLFIVVGGTF 234
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ G K + + G+ Y P++ + ++ + V+ + ++ + +
Sbjct: 235 LCYIFVIVGQKHLRPTVAGMYNYVQPVVACIVAICWGMDTFNWVKVLSVLLIFGGVYMVT 294
Query: 302 LPTVINSGKNKTKKS 316
+ + +++
Sbjct: 295 MSRSRAEMEAHAREA 309
>gi|296158434|ref|ZP_06841265.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
Ch1-1]
gi|295891378|gb|EFG71165.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
Ch1-1]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 3/282 (1%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + Y++WG T L L L + R L++ G+F + +
Sbjct: 27 LALAVVYLVWGSTYLAVHVALGSFPPLLLSGLRNLFAGIGLFVFAARRNPVWPGAVEIRN 86
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
MLV ++ + + + + + VI+ G + +
Sbjct: 87 AGLVGTMLVGLSSGMLAYGMRTVG--TGTAAVMVATVPLFATVIAAVAGRKIGRGEWFAV 144
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ + ILS S L++ + A S+ F + +
Sbjct: 145 GLGLVGIAILSHGDSAPGSAGGSLAILCGALFWAGGAHLAGRLKLPSDLFLSTSLQIGLG 204
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ SG L +P F+ + + + + I+ Y
Sbjct: 205 GAMSTLVAWVSGERMAELHLLPLLAFIYLMLIGTMAAYVAYGFLIRHTSPIIASSCMYVN 264
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P++ + +L +P+ I +++ ++ +
Sbjct: 265 PVVAVALGALLLGEPVTRSTVIATIVILASVGLSFWFDYRKK 306
>gi|312195468|ref|YP_004015529.1| hypothetical protein FraEuI1c_1600 [Frankia sp. EuI1c]
gi|311226804|gb|ADP79659.1| protein of unknown function DUF6 transmembrane [Frankia sp. EuI1c]
Length = 325
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/284 (10%), Positives = 80/284 (28%), Gaps = 9/284 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L ++WG+ L + ++ VS V+ R + + GL+ +
Sbjct: 2 SRRGWLLFAAMGVIWGVPYLLIKVAVQDVSGPVVVLARTAVGALVLLPVALRDRAGLAQV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K A + + + + V V E
Sbjct: 62 RRHWKPIVAFACIEIIGPWILLSDAERRLSSSLTGL----LIAATPVVAVVLNRVAGGAE 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ ++ + + + ++ + + +A + + + +
Sbjct: 118 PVTRVRWLGLAVGTGGVTVLAVPGISHVGVWPVAEVLICAVCYTIAPMIAARKLGDVPPL 177
Query: 202 VLAIPALFYVVW----NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + H + + + F +F I+ +
Sbjct: 178 PMTTACVSLAALVYVGPAVATWPHAMPSGRVLGALVGLGLVCTATAFVLFFALIREVGSA 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ Y P + + + IL +P+ F +V+ V+
Sbjct: 238 RSVVITYVNPAVAVAAGAVILGEPLTWTIGAGFALVLAGSVLAT 281
>gi|260870390|ref|YP_003236792.1| putative inner membrane protein [Escherichia coli O111:H- str.
11128]
gi|257766746|dbj|BAI38241.1| predicted inner membrane protein [Escherichia coli O111:H- str.
11128]
gi|323177666|gb|EFZ63250.1| carboxylate/Amino Acid/Amine Transporter family protein
[Escherichia coli 1180]
Length = 307
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLIVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSNALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|260857929|ref|YP_003231820.1| putative inner membrane protein [Escherichia coli O26:H11 str.
11368]
gi|257756578|dbj|BAI28080.1| predicted inner membrane protein [Escherichia coli O26:H11 str.
11368]
Length = 307
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/299 (16%), Positives = 106/299 (35%), Gaps = 12/299 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ Q+S + R++++ G+ + F G
Sbjct: 3 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFA--GLILLTLSFVHGD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L+FS F+ + + F++P I V S+
Sbjct: 61 KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L A L ++ ++ H L IA ++A + +
Sbjct: 121 RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G +F + F + S F ++ G
Sbjct: 181 ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLIVIGTSLTFSLYLKGA 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ PL + S+ +L + +++ ++++ + + + K
Sbjct: 241 QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARK 299
>gi|229029370|ref|ZP_04185455.1| Transporter, EamA [Bacillus cereus AH1271]
gi|228731930|gb|EEL82827.1| Transporter, EamA [Bacillus cereus AH1271]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + F+ S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFAKKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQEIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I + A FA P
Sbjct: 120 KQKATIFIVLGIAVATAGLYLLTAGDSFQLNIGDILILGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLFSIALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSVSAIIGCLCIFLGMVFVELPSKTKK 298
>gi|223983159|ref|ZP_03633354.1| hypothetical protein HOLDEFILI_00634 [Holdemania filiformis DSM
12042]
gi|223964891|gb|EEF69208.1| hypothetical protein HOLDEFILI_00634 [Holdemania filiformis DSM
12042]
Length = 304
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 87/277 (31%), Gaps = 18/277 (6%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G ++WG T + T+ L+ +S +E++ R ++ A
Sbjct: 5 RQRIGQAATLVTILIWGTTFISTKVLLDTLSPVEILFLRFSLGYLALWLAA-------PR 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + +++GF AL + + P +V +VFLK
Sbjct: 58 RLRLTDRRQEGLFALAGLCGVTLYYGFENLALSATRASNVGVIISIAPFFTVLFSAVFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV---------- 190
E+ L+ A LI ++ +++ + + + + +
Sbjct: 118 EKRPGLRFFAGFLIAMAGIMLISFNQEAVEIHPVGDGLAVLAAMIWAVYCLLSRRISELG 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + FS L + ++ F ++
Sbjct: 178 YNVLLATRRTFFYGLLFMLPLTFTQFSVSLPTILRPEILFNLVFLGLGASALCFVTWNLA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ + Y P++ V+S +L +P+
Sbjct: 238 VGILGSVKTSVTIYIVPVITAVASALVLHEPLTPKVI 274
>gi|254504433|ref|ZP_05116584.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222440504|gb|EEE47183.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 304
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/272 (11%), Positives = 74/272 (27%), Gaps = 6/272 (2%)
Query: 38 GITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVF 96
G + L ++ ++ ++ R+ + P + ++ GG +L VG+
Sbjct: 17 GSSFLAIGVAVKDINPATLVFARMAIAAPVLGCVLLLRGGGFNLGVRGWIIAAIVGLSGN 76
Query: 97 SATILAVHWGFFIYALLTRQGFL-----TSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
L + + + + L + + L +A
Sbjct: 77 VLPFLLISYAEQEVNTGLAALIMGIAPIITLVAAPLVHFEDSLTRLKVFGALAGFAGVAV 136
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
L L + A ++ + P + + AL
Sbjct: 137 LAAPDLSEGRIGSLLPELCLVVAACCYAFTALFSRRFPYPEPLKMAAASVFVGLLALGGY 196
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ S L + I+ Y I R + + + Y P++
Sbjct: 197 MALFASEPGLPAAPVPALAAVLYLGLGPTALAALIYFYLIPRIGAARLQQVNYAVPVIGT 256
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + +L + G++V + + P
Sbjct: 257 LLGIAVLGEQPGWTAWPALGLIVFGVYLVTRP 288
>gi|323144942|ref|ZP_08079503.1| putative membrane protein [Succinatimonas hippei YIT 12066]
gi|322415281|gb|EFY06054.1| putative membrane protein [Succinatimonas hippei YIT 12066]
Length = 318
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/303 (9%), Positives = 80/303 (26%), Gaps = 11/303 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
KE ++ + ++ +F +WG + ++ V R + I +
Sbjct: 15 KEAKNMFQLRQSILLFITASIWGSGFVAQSIGMDHVEPFTFTFFRTAIGGFVLIPVIWFL 74
Query: 75 SGGLSL---LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + F L F + L+ F + +
Sbjct: 75 NKLKQRGGRIIHNGSKKDLFWGSFFCGMCLVAAESFQQFGLVYTDAGKAGFITSMYIIFV 134
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL------LSLAIAVTWSAYCFAR 185
L K+ + I +L + L + + + + I A
Sbjct: 135 PILSIFLAKK-VGLSVWIGVILSVFGLYFLCIKPDMAFSIEKGDFLIFICAIIFAVHILV 193
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
V +G + + + L + N +
Sbjct: 194 IAYFVNKVDGVELACGQFFAGSFVAFFLMLIHDTITYEGLMGALPAILWVGIMSNGVAYT 253
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ G + + ++ ++ +V L + + + + +++ A+++ +P
Sbjct: 254 LQIVGQRGMNPTIATLILSLESVMAVVFGGIFLHEVMSSRELLGCALMLAAVIIAQIPPK 313
Query: 306 INS 308
Sbjct: 314 KAK 316
>gi|319787798|ref|YP_004147273.1| hypothetical protein Psesu_2208 [Pseudoxanthomonas suwonensis 11-1]
gi|317466310|gb|ADV28042.1| protein of unknown function DUF6 transmembrane [Pseudoxanthomonas
suwonensis 11-1]
Length = 336
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 82/284 (28%), Gaps = 14/284 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
A G L+ +L+ + + + + +++ R+L + P +
Sbjct: 35 RKARARQRWGLLYAALGAVLFSGKAIIVKLGYRHGADAVTLLALRMLVAFPFFLLMGAWA 94
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + TL + +LV + + L L ++TP + + +
Sbjct: 95 T---RSARTTLHRGHYLRILVLGSLGYYLASFLDFAGLAYITATLERLILYLTPTLVLLI 151
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G + R LQ IA + + + H + + + A +
Sbjct: 152 GWLAFGRRPGRLQWIALAVSYAGVALAFGHDLVAGGEGIVLGGVLVFGSALTYALYLAGS 211
Query: 195 GFFI---------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
G + +C L + L L L L
Sbjct: 212 GELVGKVGAVRLTALCSSVACLLCIGQFLLLRPLSALDLPAEVYWLSLANGTLCTVAPVL 271
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ GI R + P+ IV S+ +L +P+ +
Sbjct: 272 LVMLGISRVGSGHASQIGMLGPVSTIVLSLLLLDEPMGAWQVAG 315
>gi|319652255|ref|ZP_08006373.1| drug/metabolite transporter superfamily Permease [Bacillus sp.
2_A_57_CT2]
gi|317396078|gb|EFV76798.1| drug/metabolite transporter superfamily Permease [Bacillus sp.
2_A_57_CT2]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 97/298 (32%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
S +G + LWG++ Q+ +S + + R++ + +
Sbjct: 1 MSNSRRLGLAMIISGASLWGLSGPMLQWFFQETHLSSSDYLVIRLIAAGIFTLIFLSCRK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + ++ + + + FI + + F PV+
Sbjct: 61 VNVFAIWKHPRHWIQLLLFAVLG--MLGGQYAFIETIQVSNAVTATLFQFAGPVLITIYV 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
++ + + ++A + + + ++ + + + A+ ++ Y
Sbjct: 119 AIESRRWPSKTHLLAIVTALSGIFLLITNGSLDQILLTDKALWIGFLTALGFAFYTLQPV 178
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
++ I +L + Y++ FS NI LI ++++ F
Sbjct: 179 SLIKTWGTMTIIGWGMLLGGIVLYLLMPSFSFASMAVALNIGTLSMLIAIIVISTLSFLF 238
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +K + ++ PL+ + S LK+ + + + ++ ++ +
Sbjct: 239 YIGSLKYLSPTETSLLSSIEPLVAALISFLWLKETFGSYQLLGGVFIIAGVLFLSMKE 296
>gi|229095112|ref|ZP_04226107.1| Transporter, EamA [Bacillus cereus Rock3-29]
gi|229114066|ref|ZP_04243491.1| Transporter, EamA [Bacillus cereus Rock1-3]
gi|228669336|gb|EEL24753.1| Transporter, EamA [Bacillus cereus Rock1-3]
gi|228688297|gb|EEL42180.1| Transporter, EamA [Bacillus cereus Rock3-29]
Length = 316
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 100/305 (32%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S +
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIRPQEVGEQILFAGYRFFLSGIMLLLFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K T K +G+ + + G + + + S+F + +
Sbjct: 74 MQFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +I+ + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIMGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLGAAMMYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F N+ L LI L++ FCI++
Sbjct: 190 SKTLDIGYMTAYQMIFGSVGLLCIGALQVGAMPFTFNLYTILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQKM 309
Query: 310 KNKTK 314
+ K +
Sbjct: 310 EQKKQ 314
>gi|114048143|ref|YP_738693.1| hypothetical protein Shewmr7_2651 [Shewanella sp. MR-7]
gi|113889585|gb|ABI43636.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-7]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/264 (11%), Positives = 78/264 (29%), Gaps = 12/264 (4%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
G ++ +F + + +R+L + ++ G + K
Sbjct: 20 GTIGVFARFAV-LPAEHITFYRLLLGALFLMAYMLLTGKGRQIRHKPSKRTLIN------ 72
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+LA F+I A+ Q ++ PV++ ERL I +L +L
Sbjct: 73 GAMLAGFMAFYIEAIEYTQMATVIMIIYLAPVLASLFAHFVFHERLKRSSIATLVLALLG 132
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAY-----CFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
++M + L + + + + L ++ +
Sbjct: 133 FMLMLPVTSSQSLYSNEIMGYFYALLALLTYCGFILINRKPSAASPYQSTLVQLSVGALC 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
L + + T G + Y P++++
Sbjct: 193 LLPLVLTTPLVPSLNQFAWLLAIGFFPGFLAILFAVKALAQLPSVTYGTLSYVEPVVVVA 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIA 296
+ ++ + + T + + ++++A
Sbjct: 253 LAWWLFDEALTTQQMLGVALIMLA 276
>gi|88601352|ref|YP_501530.1| hypothetical protein Mhun_0033 [Methanospirillum hungatei JF-1]
gi|88186814|gb|ABD39811.1| protein of unknown function DUF6, transmembrane [Methanospirillum
hungatei JF-1]
Length = 363
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 89/297 (29%), Gaps = 12/297 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N + L+ + + +G T++ + + L + + L S G+ I
Sbjct: 2 NFQKKDYIPLLYAILSALFFGSCAPVTKYFVSDIGPLMLAALFYLGSGLGMCCIITGRRI 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILA---VHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + +Y++ S V +
Sbjct: 62 IRRGASPADSPVSRSDIPYLAGMSFFGGILAPVTLMYSMEITPAATGSLLLNFESVATGL 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIM------TLHSGIPLLSLAIAVTWSAYCFARKT 187
+ + +E + A I LS LI+ I + +A + A+
Sbjct: 122 MAAFLFREAVGKRIWAAMAFITLSCLILSYDPKGIFGFSIGAFGVLLACFFWAFDNNISR 181
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
G I + L+ V+ L L + VF +
Sbjct: 182 RVSGKDPFMCIMIKGLSAGVCTGVIGLLAGEIAPPLLEIPLFLLIGFFSYGGLASVFFL- 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ + G+ +P ++ S F+ ++P V + F ++VI + + + +
Sbjct: 241 -LALRSIGTARTGLFLALSPFFGVLFSSFLFREPFHEVFFLAFLVMVIGVYLLVSES 296
>gi|40062689|gb|AAR37602.1| integral membrane domain protein [uncultured marine bacterium 314]
Length = 297
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 88/294 (29%), Gaps = 6/294 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + + +WG T + ++ + S R V ++
Sbjct: 1 MKKTISLICLVVCTFIWGTTFIAQDTGMDNIGPFTFNSVRFFVGFLTVTPFVLLLERKKI 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K +++ L F +LL ++F + +
Sbjct: 61 NEQIKAKPKSFSKLIIIIGVFLFFGTVFQQVSLLYTDVANSAFFTIFYVPMVPIIVYFLF 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++L+ + L I+ +++ S + V A +A I +G F
Sbjct: 121 SKKLHWSIWPSVLACIIGGYLLSDISNANIRFGDGLVLIGALFWALHIIYIGKIIEHFDL 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIP-----DTLFLIGYGLLNSFVFCIFSYGIKRA 254
+A+ V F F +I L L F + +G +
Sbjct: 181 PFFIALLQNLIVATLSFLLAIIFEEIDISKIKLETFEILYAGILSGGAAFALQIFGQRNI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I+ + +++ IL Q + I +++ +++ + V
Sbjct: 241 APAPAAIVMSLEGVFAAIAAWLILSQILGLNNIIGCTLILGGVLLSQVAPVYEK 294
>gi|323358510|ref|YP_004224906.1| permease of the drug/metabolite transporter (DMT) superfamily
[Microbacterium testaceum StLB037]
gi|323274881|dbj|BAJ75026.1| permease of the drug/metabolite transporter (DMT) superfamily
[Microbacterium testaceum StLB037]
Length = 314
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 80/280 (28%), Gaps = 16/280 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +WG + L + L V V ++ R L + + + + +
Sbjct: 12 VLLIAVAAVWGASFLSAKELTGEVGVAPAVALRFLVAASALGVICLIRRERMPRGRGLA- 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ A G + + + V + L SV + L
Sbjct: 71 ------IAALLGCSQAAVIGLETWGVHLTSATNAGLLISLALVFTPVLESVASRSWLPRS 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+AA+ ++ + ++ G L + A V + +
Sbjct: 125 YFVAAVAAVVGVALLVSGGGFRLPTAGDALVIAAAVVRAVHVTASGHLTRGRRDSTLAVV 184
Query: 200 MCVLAIPALFYVVWNGFSGG-EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L + AL G L L + + F F + + ++R +
Sbjct: 185 CVQLVVCALTSTAVAGADLPLAVGRLTASGWLDVLFLGLMCSVFAFVVQLWAVRRTSATR 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I+ T P+ + V I + + +++ A
Sbjct: 245 ASILMGTEPVWALAVGVVIGGEALGLPGLAGGALIIAASY 284
>gi|260769777|ref|ZP_05878710.1| permease [Vibrio furnissii CIP 102972]
gi|260615115|gb|EEX40301.1| permease [Vibrio furnissii CIP 102972]
gi|315182227|gb|ADT89140.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio furnissii NCTC 11218]
Length = 299
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 91/300 (30%), Gaps = 10/300 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S P + A +L + + + L V + + R L S +
Sbjct: 1 MSNPISRAITLLVLANLLASFSDVSLKVLNGEVPTFQYVFIRQLISTLIMLPL------W 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K + A ++ + + A+ + ++V P++ + L
Sbjct: 55 WRLPKAERMQGGKCWVTFSRAQLILMGSACAMIAITYLPLATANAMFYVGPLLMLPLSIT 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L ER QI+A L+ +L++ AIA A I +
Sbjct: 115 LLGERPALKQIVATLIGFAGVLVVLRP--EHFHWAAIAGLGCALSMGLGNILIRKLPSEQ 172
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + + + +++ LL + K + +
Sbjct: 173 PMAATLFWTGVMTLPLALLLALPQWAPISWRHLGWIVVINLLVLGYHVLVLLAYKGVEAN 232
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT-VINSGKNKTKKS 316
+ + EY+ + + V + D + + ++V+ M+ + K K+
Sbjct: 233 RIALAEYSGLVFVTWFGVMWFDEVPDMLTVVGILLIVVPMMPVKWRRLWRKMWRTKRNKA 292
>gi|282864409|ref|ZP_06273465.1| protein of unknown function DUF6 transmembrane [Streptomyces sp.
ACTE]
gi|282560896|gb|EFB66442.1| protein of unknown function DUF6 transmembrane [Streptomyces sp.
ACTE]
Length = 331
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 82/275 (29%), Gaps = 4/275 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+LW + + S + R+L + ++ GL +
Sbjct: 21 AAACTTVVLWASAFVSIRSAGGAYSPGALALGRLLAGALTLGVILLVRREGLPA-RAAWP 79
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G+L F ++ ++WG T + + + + LG + L +
Sbjct: 80 GIVKSGLLWFGLYMVVLNWGEREVDAGTAAMLVNIGPILMALLGAALLGEPLSRRLLTGM 139
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS--LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A +++ L + L +A A + + +
Sbjct: 140 GVSFAGAVVVGLSMSGHGGSSVLGVLLCLLAAVAYAGGVISQKPSLSYGSPLQVTTFGCL 199
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
I A + + G E + + F ++Y + R +G Y
Sbjct: 200 IGAAGCLPFTGVLVSEAADAPASATLNMIYLGAFPTALAFTTWAYALARTTAGRMGATTY 259
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P ++++ S +L + + + ++ + V
Sbjct: 260 AVPAIVVLMSWLLLDEVPAPLTVAGGLLCLVGVAV 294
>gi|256846656|ref|ZP_05552112.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_36A2]
gi|294784365|ref|ZP_06749656.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_27]
gi|256717876|gb|EEU31433.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_36A2]
gi|294487937|gb|EFG35292.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_27]
Length = 301
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 88/302 (29%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L F LWGI + FL + V+ +I +R++ + +Y+
Sbjct: 1 MKKDNNFGMLTTFIGGTLWGINGVMGSFLFLNKNVTTAWLIPYRLMLAGLL-LLGYLYYK 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + +++F + + A+ + + + P + +
Sbjct: 60 KGRKVFDILKNTKDLFQIILFGLIGMLGTQYTYFSAIQYSNAAIATVLTYFGPTLVLVFI 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ + + +++A +L + ++ H L + S + +
Sbjct: 120 CLKERRKPLKYELVAIVLSSFGVFLLATHGNITSLQISFKALIWGMLSALSVVFYTVQPE 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + I V + + ++ F ++
Sbjct: 180 KLLKKYGPPTVVAWGMIIGGIAVTFMAKPWNIDIIFDFTTFFVLMLIILFGTITAFILYL 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + I+ P+ + ++ L + I F ++ + +
Sbjct: 240 TGVNIIGPTKASIIACIEPVAATICAILFLGISFGFLDFIGFICIISTIFIVAYFDKKTR 299
Query: 309 GK 310
K
Sbjct: 300 KK 301
>gi|229093588|ref|ZP_04224689.1| Transporter, EamA [Bacillus cereus Rock3-42]
gi|228689797|gb|EEL43603.1| Transporter, EamA [Bacillus cereus Rock3-42]
Length = 299
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 94/294 (31%), Gaps = 12/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + L + K+ +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKDLYIEKNEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K+ + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KSVLLI-----GIIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G F
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFFITL 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + L ++ L++ +++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWLLLIVTAILMHGICTLVWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQKV 293
>gi|308235364|ref|ZP_07666101.1| hypothetical protein GvagA14_03907 [Gardnerella vaginalis ATCC
14018]
gi|311115096|ref|YP_003986317.1| DMT superfamily drug/metabolite transporter [Gardnerella vaginalis
ATCC 14019]
gi|310946590|gb|ADP39294.1| DMT superfamily drug/metabolite transporter [Gardnerella vaginalis
ATCC 14019]
Length = 315
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 85/292 (29%), Gaps = 11/292 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ M+G + LWG ++ L VS L++ R L + +F +
Sbjct: 24 SPRTMMIGIILTILGGALWGTNATVSKILMSQYLVSPLQIACVRQL-AAGVLFVIVASIV 82
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L+ ++V + + +++ + + + + +
Sbjct: 83 NRKQLVDALSTKKSWPMLVVTGIVCVLLTQVAYLFTIDWTNSGTATVLQSLNLLFVLVYV 142
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-------AYCFARKTI 188
+ K + I LL +M LSL + A +
Sbjct: 143 CLRSKRTPTLRENIGVLLAFAGTALMATGGNFSSLSLPLMGLLWGLADAASTAALAIMPV 202
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G + I A ++ L LF + +F
Sbjct: 203 KLIAKWGNLTVNGITFIIAGLIMMPFVKPWQTMPPLDLRAYLLFTFTIVGGTFGAYWMFL 262
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
G+ R ++ + P++ +++V F ++ I M++
Sbjct: 263 AGVMRVGSVRGTLLGASEPVMAAITAVVFTGAVFSWADFAGFALIFIMMILL 314
>gi|255100434|ref|ZP_05329411.1| hypothetical protein CdifQCD-6_06462 [Clostridium difficile
QCD-63q42]
Length = 314
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/308 (11%), Positives = 100/308 (32%), Gaps = 18/308 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F+ A +LW L+ +FL ++ +V R+ + + + +
Sbjct: 3 EKSKGYVFIAIAGLLWATLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQIL 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ A+ + A+ + + + +P+ +
Sbjct: 63 KI----SKKGIIYSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKICY 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVG 191
KE + ++ + +L + ++ + L ++ A +
Sbjct: 119 KENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGVLSAIAYALMPTISKNALK 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I + A+F + + ++ + L+ + + + ++ GI
Sbjct: 179 EFSSSTILVYSFLFGAIFMIPSSRPWEILNYAKDLDVLSCMLMLGIVPAALAYIFYAAGI 238
Query: 252 KR-AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV---YLLPTVIN 307
+ +LS G++ + ++ IL + + +++I+ VV +
Sbjct: 239 SKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRI 298
Query: 308 SGKNKTKK 315
K+ K
Sbjct: 299 FYKSNKLK 306
>gi|225352427|ref|ZP_03743450.1| hypothetical protein BIFPSEUDO_04047 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156934|gb|EEG70303.1| hypothetical protein BIFPSEUDO_04047 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 327
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 80/294 (27%), Gaps = 11/294 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVY 73
E ++GT +WG+ + L Q+ + + R L++
Sbjct: 34 EQTPKSLLIGTGMTLLGGAMWGMNSTVAKLLMRDYQLDPIWLSCVRALFASLIFLVGSAI 93
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ ++ +L V + + + + + + +
Sbjct: 94 TTPQKLAGAVKDVKSYPKYLVTTLICVLLVQVSY-LMTIDWTNSGTATVLQTLNLIFVLA 152
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARK 186
+ K +++ LL ++ L+ + S +
Sbjct: 153 WVCLRGKRLPLKRELVGVLLAFAGTFLIATGGNFASLSLPWQGLAWGLVDAVSTAAMSIL 212
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + G + + + + L L L F +
Sbjct: 213 PVMLMLKWGNMTINGITFLMSGLILCPFAQPWANIPALDARGMLLLLYTIVCGTFLAFWL 272
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ G+ R ++ + P++ V++V + F +++I + +
Sbjct: 273 YMAGVMRVGAVRATMLGTSEPVMATVTAVAWAGEAFTFTDLTGFAMIIIMVFLV 326
>gi|52144834|ref|YP_081995.1| DMT family permease [Bacillus cereus E33L]
gi|51978303|gb|AAU19853.1| permease, drug/metabolite transporter superfamily [Bacillus cereus
E33L]
Length = 316
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 99/291 (34%), Gaps = 21/291 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K +G+ + + G + + + S+F + +
Sbjct: 74 MNFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----IILAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGTLQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVV 300
>gi|325293264|ref|YP_004279128.1| permease protein [Agrobacterium sp. H13-3]
gi|325061117|gb|ADY64808.1| putative permease protein [Agrobacterium sp. H13-3]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 85/290 (29%), Gaps = 12/290 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L LWG + + + + L + R L++ + F +
Sbjct: 6 ILLALITVFLWGFNFVAIKIGVADMPPLFLTGVRYLFAAVPLVFFL------PKPNVPWR 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ F L + S ++F + VFLG L ++
Sbjct: 60 HMIVYGMAMGFVQFGLLYPAIKLGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIVG 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ L ++ + MT + IPLL + A + F+ L
Sbjct: 120 AIVAFGGLAVIGVERMTAAALIPLLMGVGSAIAWACGNIVNRRIGQVNAVSFVAWTSLVP 179
Query: 206 PALFYVVWNGFSGGE-----HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ G + + + I+SY + R TV
Sbjct: 180 VLPLVLLSLVVEGPDAIAEGLHNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAGTVA 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P++ VS+ + I + +V+I +++ + ++ +
Sbjct: 240 PFSLLVPIVGFVSAYLAFAEHITVFEVVGAALVIIGLMLNVFGRRLSFSR 289
>gi|260425237|ref|ZP_05779217.1| possible transporter, RhaT family, DMT superfamily [Citreicella sp.
SE45]
gi|260423177|gb|EEX16427.1| possible transporter, RhaT family, DMT superfamily [Citreicella sp.
SE45]
Length = 330
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/298 (9%), Positives = 84/298 (28%), Gaps = 8/298 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGLS 79
P G L + + + + + + + L +++ R ++ +
Sbjct: 34 SPNTRGALLMMGSMAAFTMGDACVKAIGEALPLSQILVIRGSFASLFIALLAWRMGALRM 93
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + AL + + P+ ++
Sbjct: 94 SVPRQDGWLMLLRSVAEVGSSYFF-----LTALRHMPLANVTALLQMLPLTLTLGSALVF 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-AVTWSAYCFARKTIPVGSSEGFFI 198
+E + + ++ + + +L++ ++ A+ A+ R S
Sbjct: 149 REPVGWRRWVSIGVGFIGMLLIVRPGTEGFTLYSVYALIAVAFVTVRDLATRRMSAAVPS 208
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + S GE + + L G + + ++ +S
Sbjct: 209 LLVTLTSAIGVVIFAAAMSAGEPWQPLTPHLSWLLGGATACVIAGYTLSVLVMRIGDVSF 268
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ YT + ++ + + + I I+V L + ++
Sbjct: 269 IAPFRYTGLIFALLLGLVLFGDWPKALTLIGAAIIVATGSFNLWRES-QLRRRAVAQA 325
>gi|260551351|ref|ZP_05825552.1| DMT family permease [Acinetobacter sp. RUH2624]
gi|260405665|gb|EEW99156.1| DMT family permease [Acinetobacter sp. RUH2624]
Length = 306
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 85/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + +
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFISVWRQRRIVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + V Y F +
Sbjct: 128 FAVFGSILSFAGLLYVMSQGNINKLLSGGGHLGDALMIVAVFFYAFYGVFLKKWQLPLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVLFHLPLIFWFGLDGLNAQNAPSAIYAGVFASLIAPLVWMLAVQQIGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + + L + T ++++ +++
Sbjct: 248 RTSIFMNLVPVFTAIIASLWLSEQWTIYHTFGGIMILVGIIM 289
>gi|308234150|ref|ZP_07664887.1| hypothetical protein AvagD15_03839 [Atopobium vaginae DSM 15829]
Length = 333
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 88/291 (30%), Gaps = 11/291 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
A G + LWG+ ++ + V+ + + R +++ +F +
Sbjct: 42 AQHRLAYGIVLTLLGGSLWGMNATLSKVIMDTYAVTPMWLACVREIFTAI-LFLGLASRQ 100
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + M+V + ++ + ++ A+ + + V+ +
Sbjct: 101 TPRQLRDALHSKHALIMMVVMAFDVILLSQVSYLEAIFWTNSATATILQNLGVVLVMLYV 160
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA-------RKTI 188
V K + L ++ ++ L L + A + I
Sbjct: 161 CVTNKRLPRRREAWGLCLAVVGTYFISTGGDPTQLKLPLEGLAWGMACATAAAILAIQPI 220
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G F+ + + A + G + L + +F
Sbjct: 221 KLMNRYGNFVVNGLAFLCAGLMLACYVQPWNSIPHFGVTGTLYLVFTVVLGTFGAYALFL 280
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+K ++ + PL +S+ ++ F +++I + +
Sbjct: 281 EGVKEVGSVKGVMLGTSEPLAATISTALVMGTMFSPGELFGFALIIIMVFL 331
>gi|224368074|ref|YP_002602237.1| hypothetical protein HRM2_09610 [Desulfobacterium autotrophicum
HRM2]
gi|223690790|gb|ACN14073.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 318
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/314 (12%), Positives = 93/314 (29%), Gaps = 15/314 (4%)
Query: 1 MGKGATKKEYSKGLSKE---NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLE 54
M + K +G S N S + G L +F + I + + + + ++ E
Sbjct: 1 MTIQSAAKNSDRGSSNPSILNYSTRELTGILMIFGSAICFYLATFVIRIAKTETIITPEE 60
Query: 55 VISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLT 114
+ R+L V + PK L F A+
Sbjct: 61 FLFGRLLLGFAIVVTIMGVKKKKP--------LPKNWHFLFGRVVANLFAVLCFYTAVEK 112
Query: 115 RQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI 174
+ P+ + ++++ + + II +++ + ++ +G + +
Sbjct: 113 TGASTANVLNMTYPIFIAIISWFMIRDQRDPMAIIISVVSFAGVWMILSGNGFTIDIQNL 172
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
S + I + +L + + + +L
Sbjct: 173 WGLMSGIWASVAIIYLNLLRRDHDSDTILFFVFGAGTFFTYTLFHGKITMPDGNQFYYLF 232
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI-LKQPIDTVRTIVFGIV 293
+L + + G K GI+ T L+ V +F+ P+ + + ++
Sbjct: 233 ICSILGVAGQYLLTIGNKYVTALESGIISSTRILMAAVLGIFLPYDLPLSPLGWVGAFLI 292
Query: 294 VIAMVVYLLPTVIN 307
A + + V
Sbjct: 293 FGANIYLTIRKVKK 306
>gi|254505627|ref|ZP_05117773.1| permease, DMT superfamily [Vibrio parahaemolyticus 16]
gi|219551280|gb|EED28259.1| permease, DMT superfamily [Vibrio parahaemolyticus 16]
Length = 301
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 83/282 (29%), Gaps = 8/282 (2%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG + T+ L SVL I+ R + + ++ L K
Sbjct: 21 LLLLVAVFWGTSYGLTKSALVYTSVLLFITIRFSITFLCMLPVVI--RDFRRGLNKDWKI 78
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF---LGSVFLKERLN 144
G ++ + V A + + + + + L +
Sbjct: 79 AIPTGFILSAIFFCEVFGVSQTSASNAAFLISLTVILTAFAELIINKKRVSNTLLGLTVC 138
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + L + +L+ A+ R T + + L
Sbjct: 139 SVVGVLLLTSEQGIEFSLNTGDYFILTAALLRALMVTLTKRFTEGKEITTSTLTSLQSLV 198
Query: 205 IPALFYVVWNGFSGGEHFFLGNI--PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + V F F L F F + +Y ++R + V ++
Sbjct: 199 VASCAIVGAVAFLPASEFVLPTSTEFWITVAYLVLFCTLFAFYVQNYAVRRTSPTRVSLL 258
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ PL + ++ L++ + + +++ +++V
Sbjct: 259 MGSEPLFGAIFAMVWLQETLSVTQLAGGALILFSVIVTSTRE 300
>gi|50122572|ref|YP_051739.1| hypothetical protein ECA3651 [Pectobacterium atrosepticum SCRI1043]
gi|49613098|emb|CAG76549.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 318
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 86/296 (29%), Gaps = 10/296 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P GT+ + A I+ G + + V+ R + +
Sbjct: 2 TPQTRGTIEMAIAMIISGTVGWFV-LTAGQPAMTVVFWRCAFGALTMLVVCGLLGLLRRG 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ N K G+ V L ++W A + + Y P + V LG++F +
Sbjct: 61 II----NRKQTGIAVLGGLALVLNWTLLFGAYSQASIAVATVVYHTQPFMLVGLGAIFFR 116
Query: 141 ERLNHLQIIAALLIILSLLIMTL-----HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
E L + L ++++ S + + A F +
Sbjct: 117 ETLTLNKTCWLLCAFGGIVLIVSAQTGADSDDKDYLSGVLMALGAAFFYAVAAAITKKLS 176
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ I L VV + + + + + I++
Sbjct: 177 GIPPHVLVLIQLLVGVVVLAPFAAISTSPTVSQWGILVAIGVIHTGLMSTLLYSAIQKIP 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ VG + + P++ + +D ++ ++++ I +
Sbjct: 237 TALVGALSFIYPVIAALVDWAAFGHKLDGMQLAGAVAILLSAAGMTFGWRIRFNRQ 292
>gi|229131766|ref|ZP_04260641.1| Transporter, EamA [Bacillus cereus BDRD-ST196]
gi|228651722|gb|EEL07684.1| Transporter, EamA [Bacillus cereus BDRD-ST196]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPLVWF-----KEKKIIPPRAAIIPLVI 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A+ F AL + + +FLKE++N LQ+++ +L
Sbjct: 71 MGITGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQVLSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGIFTVSNINSSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ IVV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQIFGTIIVVTGCYLFS 285
>gi|16080815|ref|NP_391643.1| transporter [Bacillus subtilis subsp. subtilis str. 168]
gi|221311727|ref|ZP_03593574.1| hypothetical protein Bsubs1_20331 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316053|ref|ZP_03597858.1| hypothetical protein BsubsN3_20242 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320964|ref|ZP_03602258.1| hypothetical protein BsubsJ_20185 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325249|ref|ZP_03606543.1| hypothetical protein BsubsS_20351 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|732379|sp|P39649|YWFM_BACSU RecName: Full=Uncharacterized transporter ywfM
gi|414015|emb|CAA51647.1| ipa-91d [Bacillus subtilis subsp. subtilis str. 168]
gi|2636299|emb|CAB15790.1| putative transporter [Bacillus subtilis subsp. subtilis str. 168]
Length = 296
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 91/287 (31%), Gaps = 12/287 (4%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV A WG T E + L + R+L + A+ +K
Sbjct: 8 LFVLIAAFFWGTTGTVQALAPESATPLAFGAFRLLIGGSAMLLAVWISRE------LHVK 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + + + FF T T + P+I+ L LK+R +
Sbjct: 62 NWAWPLVFLAAVCMACYQPLFFTAVKETGIAVGTVIAIGSAPIIAGTLEWAVLKKRPRNS 121
Query: 147 QIIAALLIILSLLIMTLHSGI-----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
IA +L + ++ S + +A+ S + + + ++
Sbjct: 122 WWIATVLALAGCWLLFSDSSNVRIDVAGVLMALGAGASFAGYTLISKAMMKTQPPRATSA 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ + + + + + L L + + +F+ G+ S
Sbjct: 182 VVFMISAILLTPLLWQLDISWILTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAVT 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ PL + VF + + + + ++++ ++V
Sbjct: 242 LSLAEPLTASLLGVFFIGEMLSPSSWLGIALMMLGLLVISAAPRKQK 288
>gi|332288714|ref|YP_004419566.1| conserved hypothetical protein, EamA-like transporter family
[Gallibacterium anatis UMN179]
gi|330431610|gb|AEC16669.1| conserved hypothetical protein, EamA-like transporter family
[Gallibacterium anatis UMN179]
Length = 285
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 88/291 (30%), Gaps = 16/291 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +F A +WG + + + ++ R + V + F ++
Sbjct: 1 MLALFIAIAIWGSSLPIGKLAYNSFEPVILVQFRFCIAALIVLPTFIRFYRYIA------ 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + S V + L + P+I VF+G +F KE+
Sbjct: 55 -PHHYKRLALLSFLNYPVVFLLQFVGLKYTSASSAVTMLGLQPLIMVFVGDLFFKEKAAK 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------WSAYCFARKTIPVGSSEGFF 197
LL + + ++ ++ K I S +
Sbjct: 114 FDYFLGLLAFIGIALVVSDDDPNSQIDVWGCFLVLASTVVFAFTTRWAKIIMKDVSPRSY 173
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++ + HF I L + + I++ G+ +
Sbjct: 174 TAVTIMLGMIFCIPFTLLLNQQWHFDPPPIDLAALLYLGIVCSWLAPKIWNSGLPSVSAN 233
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G++ P+ I+ ++ L + I+ +V+ V++L V N
Sbjct: 234 ISGVISALEPIFGILFAILFLHEKINWKIGSGIALVLGVTFVFILHAVRNK 284
>gi|237743183|ref|ZP_04573664.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|229433479|gb|EEO43691.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
Length = 301
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 88/302 (29%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L F LWGI + FL + V+ +I +R++ + + + Y
Sbjct: 1 MKKDNNFGMLTTFIGGTLWGINGVMGSFLFLNKNVTTAWLIPYRLVLAGLLLLGYLYYKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + + +++F + + A+ + + + P + +
Sbjct: 61 GS-KIFDILRTPKDLLQIILFGLIGMLGTQYTYFSAIQYSNAAIATVLTYFGPTLVLIFI 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ K + +I+A L + ++ H L + S + +
Sbjct: 120 CLKEKRKPLKYEIVAIALSSFGVFLLATHGNITSLQISFKALVWGMLSALSVVFYTVQPE 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + I + + + ++ F ++
Sbjct: 180 KLLEKYGPPTVVAWGMIIGGIAITFVTKPWNIDVIFDFTTFFVLMLIILFGTITAFILYL 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + I+ P+ + ++ L + + F ++ + +
Sbjct: 240 TGVNIIGPTKASIIACIEPVAATICAILFLGVNFGFLDLLGFICIISTIFIVAYFDRKTK 299
Query: 309 GK 310
K
Sbjct: 300 KK 301
>gi|212702020|ref|ZP_03310148.1| hypothetical protein DESPIG_00022 [Desulfovibrio piger ATCC 29098]
gi|212674535|gb|EEB35018.1| hypothetical protein DESPIG_00022 [Desulfovibrio piger ATCC 29098]
Length = 329
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 85/289 (29%), Gaps = 17/289 (5%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG PL + + +++ + + R L F + L +L+
Sbjct: 23 WGAQPLLVKITMRELNPSTMTAVRYLLMSITFFALM-----RWRGLPLLPPLRLMPALLL 77
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A++ L + TP ++ + +FL+ERL ++++ LL +
Sbjct: 78 MGITGVALNNIAQFTGLQLSTVSNATLIATTTPAVTALVALIFLRERLLPIELLGILLSV 137
Query: 156 LSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L + I +L W+ Y + L
Sbjct: 138 AGALFLVSKGQIDVLLHISFNKGDLLFFTAQLGWAVYSLTGFRVMRHLPPLTTTAWAGLF 197
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A ++ + +G + + ++ G+K I
Sbjct: 198 GTAGTFIYAALTGQLDVHGVGGTTLACMVYIVWIGGVCAMIFWNMGVKVVGAGQAAIFLN 257
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
PL+ +V V +L + ++ + + I ++
Sbjct: 258 IMPLVGVVLGVTLLGEDFAFREAFGAVGILGGVYILTHSRQIMRRMDQR 306
>gi|225424254|ref|XP_002280818.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297737689|emb|CBI26890.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/316 (10%), Positives = 84/316 (26%), Gaps = 34/316 (10%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + + +++ + +E + + R + S +V G
Sbjct: 120 ASRKVRGIILLNVLTVVYASNIPVVKEVEAIMDPATFAAVRFVVSAIPFIPFVVRARG-- 177
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +++ + LLT SF T I V L
Sbjct: 178 --------DVQTRNAGIELGFWVSLGYLMQSLGLLTSDAGRASFLSMFTV-IVVPLLDGM 228
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG------- 191
L + AL+ IL + ++ P + + + +
Sbjct: 229 LGATVPAHTWFGALMSILGVAMLESSGSPPSVGDLLNFLSAVFFGVHMLRTEHISRSTSR 288
Query: 192 -----------SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP----DTLFLIGY 236
F + + + S G L +
Sbjct: 289 ENFLPLLGYEVCIVALFSTIWYFVGGSFGAIQECDLSSGMWTMLWDWMVAFPWIPAFYTG 348
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ I ++ + I+ P+ + F+L + ++ I +V+
Sbjct: 349 IISTGLCLWIEMDAMRDVSATETAIIYGLEPVWGAGFAWFLLGERWSSLGWIGAALVLGG 408
Query: 297 MVVYLLPTVINSGKNK 312
+ + + K++
Sbjct: 409 SLTVQIFGSSSPNKSR 424
>gi|118443339|ref|YP_877056.1| integral membrane protein [Clostridium novyi NT]
gi|118133795|gb|ABK60839.1| Integral membrane protein [Clostridium novyi NT]
Length = 306
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/289 (9%), Positives = 78/289 (26%), Gaps = 9/289 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ + +WG+ + + E + + R + I+YF+
Sbjct: 1 MKNKRLGANALLLITAAIWGLGFVAQRVGAENLGAFTFNAIRFGLGGISLIPLILYFNKE 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF----SYFVTPVISVF 133
K I+ + L T+ ++ V
Sbjct: 61 KKKSKKDEVAVTDGFKKEVLPGIMLGGALYIAATLQQIGLAYTTAAKAGFITGLYIVLVP 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIP 189
+ +F+ +++ I L + L +++++ + + + + A
Sbjct: 121 IMGIFIGHKIDKGAWIGMLFSVAGLYLLSINENFAISNGDLLEVIGAVFWATHILLIDYF 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + L G L + +
Sbjct: 181 SKKVDSLKLSCIQFITCGILSFLTALCVEVITLQSIYNAMIPLLYGGFLSVGVAYTLQVV 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
K AK S I+ + + V +L + + T + +++ ++
Sbjct: 241 AQKSAKPSHAVIILSMEAVFGAIGGVLLLGEEMTTRGFLGCAFILVGIL 289
>gi|288957037|ref|YP_003447378.1| integral membrane protein [Azospirillum sp. B510]
gi|288909345|dbj|BAI70834.1| integral membrane protein [Azospirillum sp. B510]
Length = 286
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 85/286 (29%), Gaps = 5/286 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + +L+ I ++ V LEV+ R L+SL + + + +
Sbjct: 1 MLLSALLFAIGNTGVRWAATVMDPLEVVFFRNLFSLLWMLPWALTAGAPACRAVLSERRL 60
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
++ + + YA+ F P+ ++ L+ER+ +
Sbjct: 61 APYLSRALTS---LLAMTAWFYAIAHIALPTAIAVSFAVPLFVAAGAALILRERVRPRRW 117
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
IA + +LI+ P+ + + A + + ++ L
Sbjct: 118 IAVCVGFAGVLIVLRPGSTPIDLAFLGLFVHCIAAAATILQMRLLSQRDRSAVIVTYLGL 177
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F + + L G L + + + A+ S V +Y
Sbjct: 178 FVTPMALVPALFVWSWPSWSVLGGLALLGGLLTLGQLAMTQSLALAESSAVMPYDYARLP 237
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V + Q +D I +V+ Y + + +
Sbjct: 238 FTAVIVWILFGQTMDLWGWIG-ALVIAGSAFYSMHRDAAEERKAAR 282
>gi|228920406|ref|ZP_04083751.1| Transporter, EamA [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228839036|gb|EEM84332.1| Transporter, EamA [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + F+ S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFAKKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDI----KQSSFAGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVMGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGMFSSICAFLFEDWEKLLSAALWTNSSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + MV LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKK 298
>gi|217032246|ref|ZP_03437744.1| hypothetical protein HPB128_2g48 [Helicobacter pylori B128]
gi|216946117|gb|EEC24728.1| hypothetical protein HPB128_2g48 [Helicobacter pylori B128]
Length = 294
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 103/298 (34%), Gaps = 14/298 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLVYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISDPSVENVGPVEILMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + +EYT + ++ +++ +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLK 293
>gi|163737158|ref|ZP_02144576.1| hypothetical protein RGBS107_03408 [Phaeobacter gallaeciensis
BS107]
gi|161389762|gb|EDQ14113.1| hypothetical protein RGBS107_03408 [Phaeobacter gallaeciensis
BS107]
Length = 287
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 88/291 (30%), Gaps = 9/291 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ G+L + A + + ++ + + V +++ + L
Sbjct: 1 MDTLRGSLLMVLAMAAFALEDMFIKSAARSLPVGQILILFGAGGMVIFAIVARAQGHRLW 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + A+ S TP++ VF
Sbjct: 61 NPVFCTRALLVRSVAEVAGRLCFT------LAIALTPLSSASAILQATPLVVSAGAVVFF 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-AVTWSAYCFARKTIPVGSSEGFFI 198
E + + +A + +L++ ++ AV + R + G
Sbjct: 115 GEHVGLRRWLAIAAGFIGVLMILRPGASGFELASLFAVAGTLGFAGRDLATRAAPAGLSN 174
Query: 199 EMCVLAIP-ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
LA L G ++ T+ L L+ + + ++ ++S
Sbjct: 175 AHLGLAGFAMLVVAGLIALPFGAPMKTPDVATTIDLAAVTLVGVVAYQALTGAMRVGEIS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V YT + +V V + + D I ++VI+ L+ +
Sbjct: 235 VVAPFRYTRLIFAMVLGVVVFHERPDMWTLIGSAVIVISGGFTLMRSNRRQ 285
>gi|308180269|ref|YP_003924397.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
gi|308045760|gb|ADN98303.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 312
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 95/298 (31%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFA--IVYFS 75
+ ++GTL + L+G+ + Q L ++ +++ R+L + + +
Sbjct: 1 MKRLVGTLCGIISAALFGLGGILAQPLLSEQVLTPQQIVLLRLLIGGAMLLLYRNLFFKQ 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S K ++++ L F A+ + + +P I +
Sbjct: 61 ARKSTKKIWTHWRILTRIMIYGIAGLCTAQIAFFSAINYSNAAVATVFQSTSPFILLVFT 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ K + L ++ + ++ + ++ L A+ + +
Sbjct: 121 ALKAKRLPSLLAGMSLISALMGIWLIVESGFKTGLIKPEAIIFGLIAAIGVILYTKLPVP 180
Query: 196 FFIEMCVLAIPALFYVV-----WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ + I V+ + LI L + ++
Sbjct: 181 LLNQIAAVDILGWALVIGGVIALIHTPLPNLVRFSKMQLLAVLIIVILATVVAYDLYLES 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K + P+ ++ + L Q + + +VV A+++ LP I +
Sbjct: 241 LKLIDGFLATMTGLFEPISSVLFGMLFLHQILVPQALVGIILVVGAIMILNLPHHITA 298
>gi|291486543|dbj|BAI87618.1| hypothetical protein BSNT_06020 [Bacillus subtilis subsp. natto
BEST195]
Length = 312
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 93/284 (32%), Gaps = 11/284 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + +++G +++ + E++ R L + + + +
Sbjct: 17 VIKMVISMVIFGSIGFFSEH-TNLPSFELVFVRCLCATLFLGLCWLASGQYKTEKW---- 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + V + L +W F + + Y + PV+ + LGS +E+LN +
Sbjct: 72 SKRDVLQTLACGFFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSFLYREKLNVI 131
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIEM 200
+ + ++ L +++ +G L+ + A + G
Sbjct: 132 SVSSIIICFLGTALISGINGSTSLTQLMGSGIIWAVLAALFYAFTTLLGKGIHNLSPYTT 191
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++ G L + + + V+ +F ++ +
Sbjct: 192 TFLQTGLGVIILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDSLRILSTKFIS 251
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ + P + IV D +T+ ++ M + L+
Sbjct: 252 IIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVLIFAGMALTLVRR 295
>gi|228939789|ref|ZP_04102367.1| Uncharacterized transporter [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972678|ref|ZP_04133278.1| Uncharacterized transporter [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979263|ref|ZP_04139601.1| Uncharacterized transporter [Bacillus thuringiensis Bt407]
gi|228780464|gb|EEM28693.1| Uncharacterized transporter [Bacillus thuringiensis Bt407]
gi|228787043|gb|EEM35022.1| Uncharacterized transporter [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819885|gb|EEM65932.1| Uncharacterized transporter [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326940441|gb|AEA16337.1| drug/metabolite exporter family [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 304
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 82/263 (31%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRLGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ L SVFL +++ +
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILASVFLNDKMKLNGWL 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVISFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGVYQEILTAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|254482254|ref|ZP_05095495.1| Integral membrane protein DUF6 [marine gamma proteobacterium
HTCC2148]
gi|214037579|gb|EEB78245.1| Integral membrane protein DUF6 [marine gamma proteobacterium
HTCC2148]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 106/304 (34%), Gaps = 10/304 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+S T++ +++ A + + + ++ L ++ LE++ R L V +V
Sbjct: 1 MSTIEQRHNTLLAVVWMMAALACFCLLAIASRELTANLATLEILFWRSLLGFVLVCSLLV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G S+ P+ +G + T ++ A+ F TP+ +
Sbjct: 61 RLGGMASVRM----QPRIMGWHLLRNTAHFSGQCAWLVAIAALPLAEVFALEFTTPLWAA 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L ++F+ E L + ++ +L ++ +LI+ + ++ + A+ F I
Sbjct: 117 LLAALFMGESLTRGRWLSLVLGLVGVLIILRPGAAVIDPASLIMLAGAFGFGINVIATRR 176
Query: 193 SEGFFIEMCVLAIPALFYV-----VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
E + LFY+ +++ L D L+L
Sbjct: 177 LTQLLRENSHSFLVILFYMTAMQGIFSLAPIVGQLRLPASTDWLWLAVAAATALTAHYCL 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S + A + V M+Y L+++ + ++ + + I +++ L
Sbjct: 237 SRALSLADSAVVMPMDYLRLPLIMLLAWWLYGETVSIFLLIGATMIIGGNAAGLYLETRR 296
Query: 308 SGKN 311
Sbjct: 297 LKAR 300
>gi|150397437|ref|YP_001327904.1| hypothetical protein Smed_2237 [Sinorhizobium medicae WSM419]
gi|150028952|gb|ABR61069.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 300
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 96/302 (31%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + LF+ + +WG + + +E + L I R + +
Sbjct: 1 MTRIQANLFLLFSGAIWGAGFVAQSTAMEAIGPLWFIGLRFAIAALVALPLALLEKRQ-- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
T A+ VF L Y LLT + F + V L VFL
Sbjct: 59 --AATPLPRHAMPNFVFIGLALFGGAVTQQYGLLTTTVTNSGFLTGLYVVFVPVLTVVFL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ R + + AALL + +++ + G +L++ A+ W+ +
Sbjct: 117 RRRPHWVIWPAALLATFGIFLLSGGALSALTGGDMLTIVCALFWAVQLMLVGIFAPATGR 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ M A+ A+ V G L + F G +
Sbjct: 177 PMLLSMTQFAVCAIAGCVLAGLFEPLSLAAIKGALPQILYAGVFSSGIAFICQVVGQRYT 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I + L + V +L + I V + ++ +AM+ L + + +
Sbjct: 237 TAPQAAIFLSSEALFAALFGVLLLGETITPVGYVGCAVIFLAMLAVELIPELTKKRREAA 296
Query: 315 KS 316
K+
Sbjct: 297 KA 298
>gi|20090519|ref|NP_616594.1| integral membrane protein [Methanosarcina acetivorans C2A]
gi|19915545|gb|AAM05074.1| integral membrane protein [Methanosarcina acetivorans C2A]
Length = 324
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 93/290 (32%), Gaps = 14/290 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A I++G ++ + L+ +SV +I +RVL+ L + + L K
Sbjct: 15 LLTACIIYGTVGIFMELLKDMSVGSIIFYRVLFGLSAIICYLAITGNLGQLSLKRKKKYL 74
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +++ + + + + A+ + P+ FL + L E+ I+
Sbjct: 75 LLLGILYVSQMFS-----YYSAIRYLGASSAVLLLYTDPIYLTFLAPIILGEKNTGRTIL 129
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV------- 202
A L ++ + +T G + F S +
Sbjct: 130 ALFLGLIGVFYVTRPEGGFEQLAFGSTYLKGVIFGLIGGLFSSGVIISVRFLRDEYNGLT 189
Query: 203 --LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ A+ V + F+ + + + L+ + G+ T
Sbjct: 190 QLVWQSAISLVFLSPFAVTLPGQVLAANLPILTLFGILITGVGAVFYIRGVAGVSAITGS 249
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ P+ I IL PI + I ++ A +V L K
Sbjct: 250 ILTLLEPVSCIFFDYTILGSPIHSGMLIGSFFILAAAIVVSLDNFDFLKK 299
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 40/135 (29%)
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ + Y + + + + L ++ G L
Sbjct: 11 HHIELLTACIIYGTVGIFMELLKDMSVGSIIFYRVLFGLSAIICYLAITGNLGQLSLKRK 70
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+L+ G+L + I+ S+ ++ YT P+ + + IL + +
Sbjct: 71 KKYLLLLGILYVSQMFSYYSAIRYLGASSAVLLLYTDPIYLTFLAPIILGEKNTGRTILA 130
Query: 290 FGIVVIAMVVYLLPT 304
+ +I + P
Sbjct: 131 LFLGLIGVFYVTRPE 145
>gi|53712083|ref|YP_098075.1| hypothetical protein BF0790 [Bacteroides fragilis YCH46]
gi|253563878|ref|ZP_04841335.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265765420|ref|ZP_06093695.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52214948|dbj|BAD47541.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|251947654|gb|EES87936.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263254804|gb|EEZ26238.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301161805|emb|CBW21345.1| putative transmembrane permease [Bacteroides fragilis 638R]
Length = 302
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 82/286 (28%), Gaps = 6/286 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F A ++WG+ + L + S L V + R++ + + +
Sbjct: 5 KNLKGHALAFTANVMWGLMSPIGKSALAEFSALSVTTFRMVGAAAAFWILSAFCKQEQVG 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+D +K A + + + + TS + V K
Sbjct: 65 HRDMVKIFFASLFALVFNQGIFIFGLSLTSPIDASIVTTTSPIITMIVAAIYLKEPVTNK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L LI++ G + + + T+ G S+ +
Sbjct: 125 KVLGIFIGAMGALILILSSQAVSAGGGSIWGDLLCMIAQLSFSIYLTVFKGLSQRYSAIT 184
Query: 201 CVLAIPALFYVVWNGFSGGE-----HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + FS + + L + + K +
Sbjct: 185 INKWMFIYASICYIPFSYQDIASIKWDSISTAAIYQVLYVVLCGSFIAYICIMTAQKLMR 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V + Y P++ ++++ + + + +V + +
Sbjct: 245 PTVVSMYNYVQPIVASIAAILMGIGSFGWEKGVAIALVFLGVYFVT 290
>gi|13470755|ref|NP_102324.1| hypothetical protein mlr0545 [Mesorhizobium loti MAFF303099]
gi|14021498|dbj|BAB48110.1| mlr0545 [Mesorhizobium loti MAFF303099]
Length = 337
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 87/294 (29%), Gaps = 9/294 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G LF+ A + + + T++ Q +++ +V+ R ++ V L
Sbjct: 35 SPNLRGALFMMVAMVGFTLNDAITKYSSQSMNMAQVMLIRGAFASLFVGLLAWQRGALLR 94
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ A F+ AL S P+ ++F
Sbjct: 95 P------GLMLQPLVAMRVLGEAGATVSFLVALAHLPIGSVSAVLQALPLAVTMGAALFF 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A ++++ ++ S C + +
Sbjct: 149 GEAVGWRRWLAIAAGFAGVMVIVRPGFDGFTIYSLWALASVACCTVRDLATRRIPQTTPT 208
Query: 200 MC--VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M A+ V + T L +L + ++ ++S
Sbjct: 209 MLVSTATALAMTVVGAVLLVPMGGWTPMTGKSTALLALAAVLVLIGYQFIIMAMRSGEIS 268
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ YTA L I+ + + D + IVV + + L + +
Sbjct: 269 FIAPFRYTALLWSILLGLIVFGDIPDMPMVVGATIVVGSGLYALYRERVVGRRR 322
>gi|302517847|ref|ZP_07270189.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302426742|gb|EFK98557.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 333
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/308 (7%), Positives = 68/308 (22%), Gaps = 41/308 (13%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MG + + +G + + + L + L V+ RV + +
Sbjct: 1 MGLGLALVSALAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVLLPVAWRHRALPRARP 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L + +A + A+ + ++ P + + +
Sbjct: 61 AL--------LLGYGLFAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRP 112
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI---- 198
++ +L + L + + + V S G
Sbjct: 113 VSRAATAGVVLAVGGLACVVEVWAGLRFDALGLLLALGAACCQVGYFVLSDHGTEPASPA 172
Query: 199 ---------------------------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+ E L
Sbjct: 173 EPAGRTGPAQEPPSPLGVIAYGLLVGAVVLTFVARPWGMDWSVLGGRAEMDGTPVAAFLL 232
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ + ++ ++ ++ V + +L + + +
Sbjct: 233 LAWIVLVATVVAYATGVVSVRGLSPQVAVVVACLEAVVATVLAWVLLGEHLSPPQLAGGC 292
Query: 292 IVVIAMVV 299
+V++ V
Sbjct: 293 VVLVGAFV 300
>gi|229189777|ref|ZP_04316790.1| Transporter, EamA [Bacillus cereus ATCC 10876]
gi|228593691|gb|EEK51497.1| Transporter, EamA [Bacillus cereus ATCC 10876]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQEL----KHSSVAGLIVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|134298594|ref|YP_001112090.1| hypothetical protein Dred_0726 [Desulfotomaculum reducens MI-1]
gi|134051294|gb|ABO49265.1| protein of unknown function DUF6, transmembrane [Desulfotomaculum
reducens MI-1]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 79/277 (28%), Gaps = 13/277 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG+T + Q L + I R + + +
Sbjct: 11 LALLAVTFVWGVTFVVVQDALSGIGPYYFIGIRFAIAFAFLALIYW--------KRLQNL 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + L + F L F + V+ S+ + +
Sbjct: 63 NIETIKAGFIIGAFLFAGYAFQTVGLQYTTASNAGFITGLAVVLVPLFSSLITWKIPGNS 122
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI----PVGSSEGFFIEMCV 202
++ + L +++L + + + I + A +A I + + + +
Sbjct: 123 VLLGITSATVGLGLLSLGNNLSINFGDILCFFCAVSYAGHIILVGKYAPTRDPILLAILQ 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + A+ + I + F I + + + I+
Sbjct: 183 VGVVAIISLGCGLALETLPDEFSRPVLNGLFITAIPATALAFLIQNSVQRFTSATHTAII 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + + + + + +++ M++
Sbjct: 243 FIMEPVFAAATGWLWAGEILSDRQWVGCLLILTGMLI 279
>gi|24373139|ref|NP_717182.1| integral membrane domain-containing protein [Shewanella oneidensis
MR-1]
gi|24347338|gb|AAN54626.1|AE015602_12 integral membrane domain protein [Shewanella oneidensis MR-1]
Length = 283
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 112/289 (38%), Gaps = 10/289 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +L L + LE V +++ +R L++ V + + G L L
Sbjct: 4 LLMILAAQLLIASGNLLVKLLETNTPVFQLVLYRQLFATLLVLPFVWHLQGNLKLSP--- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A ++ + F+ A+L + + +P+I + L + FL ER+ +
Sbjct: 61 ----FYKVHLSRALLIGLGNAIFMLAVLHLPLATVTAVIYSSPLILLLLSAFFLNERIGY 116
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +A L+ +L+++ + + A A ++ + + L
Sbjct: 117 RRSVAGLIGFTGILLISQP--TEVNLYIGLAFFGAMISAINSLILKAYSTHEHPFSTLFW 174
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
F +V+ + ++P + G+ + + + +RA S + +EYT
Sbjct: 175 SNAFAMVFLIPATWYEGANFSLPVAQVGLTLGVFYVGMTYLIIHAYRRADASQMAPVEYT 234
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + L + + V I G+V+ + ++ + K++ +
Sbjct: 235 GLIFAALLGWWFLDETLSVVVCIGIGLVIFSSLLPSYGELKAKWKSRRR 283
>gi|329851085|ref|ZP_08265842.1| hypothetical protein ABI_39170 [Asticcacaulis biprosthecum C19]
gi|328839931|gb|EGF89503.1| hypothetical protein ABI_39170 [Asticcacaulis biprosthecum C19]
Length = 320
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 16/303 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++ + LW + + + + + + S R +++ + V
Sbjct: 19 SLRAYALLILTNFLWAGNSVAGKLAVGHIEPVLLTSLRWVFACLIILVLAV----PQLKR 74
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ N K +L + A + AL P++ +
Sbjct: 75 DWPVINVKWPLLLGYGAIGFTLFNLLLYMALNHTSTVNVMIEQSGIPLVIFLANFALFRL 134
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPV 190
R QI +L +L+ H I + L + ++ Y A + P
Sbjct: 135 RATLAQIAGFVLTFCGVLVTATHGDIRQLLHLNLNIGDAMMLVAVLVYAGYTVALRWKPD 194
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ F C+ A+ A + + + + + +
Sbjct: 195 LHWKTFLATSCIGALVACVPALIWRYHNAPVTWPDAQGWWVVAYAAVFPSLIAAGAYIAA 254
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ + G+ P+ ++ +V IL++P+ +V +V+ +
Sbjct: 255 IELIGSNRAGLFINLLPIFGVILAVLILREPLHGFHIAALALVCAGIVLAEWSRIRAGLA 314
Query: 311 NKT 313
+T
Sbjct: 315 ERT 317
>gi|324324874|gb|ADY20134.1| Transporter, Drug/Metabolite Exporter family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 94/275 (34%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPQRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKINTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 285
>gi|317496366|ref|ZP_07954720.1| integral membrane protein [Gemella moribillum M424]
gi|316913502|gb|EFV34994.1| integral membrane protein [Gemella moribillum M424]
Length = 301
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 91/295 (30%), Gaps = 10/295 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVY----FSGGLSLLK 82
L + I+WG+ ++ +V L V+ R L ++ + + +
Sbjct: 8 LILIGVVIIWGLAFIWQNIASKVLGPLTVVGLRSLIAVIFITLVAILVPTLYKSQEPKWI 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + K + + + +L + + F + I F+G +
Sbjct: 68 GQISSSKKLWLGIMCGVVLFLAMYIQQIGIGMTTAGKAGFITVLYICIVPFIGVFLGNK- 126
Query: 143 LNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
LN II +L ++ +++ + + + I+ + F+
Sbjct: 127 LNKFFIIGLILAVIGFYLLSVKEEFTLELGDVIVFISAIFFGVHIIVIDYSALRVNSMFL 186
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + A+F + L L + + + T
Sbjct: 187 SIIQLVVVAIFSLGLAMIKETIILADILSVAAPLLALGILSSGLGYTGQIIAQREIPPHT 246
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ ++ + V IL + I I IV++ +++ L + +
Sbjct: 247 TSLIMSLESVVAAIGGVLILNEHIGLREGIGMAIVLVGIIISQLREKKSPKLEQK 301
>gi|304409646|ref|ZP_07391266.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS183]
gi|307304004|ref|ZP_07583757.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
BA175]
gi|304352164|gb|EFM16562.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS183]
gi|306912902|gb|EFN43325.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
BA175]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 77/286 (26%), Gaps = 8/286 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + +E +S R L + + Y L K+ +L
Sbjct: 13 IWGFGFVAQTLGMEHLSPFAFNGIRFLMGTFSLVPLVWYLRRQNKLHVSAPKDLVRGSLL 72
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+L F L F + V+ LG + LK + +
Sbjct: 73 --VGVLLFAGASFQQVGLQYTTAANAGFITGLYIVLVPVLG-LALKHTTGLNTWLGCAIA 129
Query: 155 ILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L +++ G+ + + + A + M + +
Sbjct: 130 AVGLYFLSVKDGMSIGYGDALQLVGALFWALHILAVDHFAKRISPVVLAMMQFFVCGVLS 189
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
++ + + + + K A + I+ +
Sbjct: 190 LMVSAVIEVTTLDGVMAAWGSLFYAGLISVGIAYTLQVLAQKNAHPAHAAIILSLETVFA 249
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + L + + G++++ M++ +P K S
Sbjct: 250 AIGGIIFLDESLSVRALFGCGLMLLGMLISQVPLRYLVKSRHQKVS 295
>gi|285018003|ref|YP_003375714.1| drug/metabolite transporter superfamily transmembrane protein
[Xanthomonas albilineans GPE PC73]
gi|283473221|emb|CBA15726.1| putative drug/metabolite transporter superfamily transmembrane
protein [Xanthomonas albilineans]
Length = 302
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/293 (10%), Positives = 94/293 (32%), Gaps = 6/293 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + + +G+ + + V + F +++ L
Sbjct: 8 LRAAALMLASTMAFGLMVVAIRLASAQLAT------VEIAFFRNLFGLLFLLPILLRPGR 61
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L + + I V +A+ + TP+ +++L E +
Sbjct: 62 PLPRTTQLPRYLLRTAIGLVSMLAGFWAIGHLPLSQAIALSYSTPLFVTLAAALWLGEIV 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +A L + +L++ + + +A A I + V+
Sbjct: 122 RLRRWLAVLCGFIGVLMIVRPGATNFSAGTLVAVLAALMSALVAIQIKQLARVDTANTVV 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
F++ + + + L+L+ GL + +++ ++ ++S + +
Sbjct: 182 FYTYAFWLPMSLLPALFAWQWPHGIAWLWLLATGLFGTLGQLLWTRALRLGEVSALTPIS 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ L+ + ++ + D + I++ A + + + +K+
Sbjct: 242 FIQLPLVTLFGWWLFGESPDRWTVLGAAIILAANAYIAHREALLARRAANRKN 294
>gi|193214432|ref|YP_001995631.1| hypothetical protein Ctha_0715 [Chloroherpeton thalassium ATCC
35110]
gi|193087909|gb|ACF13184.1| protein of unknown function DUF6 transmembrane [Chloroherpeton
thalassium ATCC 35110]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 29/304 (9%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+N G ++V A ILW + + + ++ ++ R +++ +F +
Sbjct: 7 KNVQTDIWKGMMYVAGAAILWSTGGVLIKSIS-LNACQISFWRAMFATFTIFAIV----- 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
K + +F+A A F+ A + P+ G
Sbjct: 61 -------KPKQISSDITTLFAAVAYAATLILFVVATKLTTAANAILLQYTAPIYVGLFGW 113
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIP 189
+FLKER++ I+ + + + I + G + RK
Sbjct: 114 LFLKERVSFSHIVTMGIGFIGMAIFFVDGLSTENHLGNLAAIFSGLGFGVFLVLLRKKSD 173
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGG---------EHFFLGNIPDTLFLIGYGLLN 240
+ I ++ I ++++ F + + L
Sbjct: 174 DNPIDSVLIGNGLIMIFCASAMMFSAAQDPRGIDHTDVLYGFAISTADSVMVAFLGILQI 233
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ IFS GI ++ P+L + + + + I I++ A+
Sbjct: 234 GIPYVIFSRGIAAIPALDASLLSMLEPVLNPIWVLLFVGEIPSFNAIIGGAILLAAVAFQ 293
Query: 301 LLPT 304
T
Sbjct: 294 SYRT 297
Score = 38.0 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 40/130 (30%)
Query: 176 VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
Y + + + ++ F+ I + +
Sbjct: 14 WKGMMYVAGAAILWSTGGVLIKSISLNACQISFWRAMFATFTIFAIVKPKQISSDITTLF 73
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + +F K + +++YTAP+ + + LK+ + + GI I
Sbjct: 74 AAVAYAATLILFVVATKLTTAANAILLQYTAPIYVGLFGWLFLKERVSFSHIVTMGIGFI 133
Query: 296 AMVVYLLPTV 305
M ++ + +
Sbjct: 134 GMAIFFVDGL 143
>gi|145632466|ref|ZP_01788200.1| hypothetical protein CGSHi3655_01589 [Haemophilus influenzae 3655]
gi|145635130|ref|ZP_01790835.1| hypothetical protein CGSHiAA_01625 [Haemophilus influenzae PittAA]
gi|144986661|gb|EDJ93213.1| hypothetical protein CGSHi3655_01589 [Haemophilus influenzae 3655]
gi|145267551|gb|EDK07550.1| hypothetical protein CGSHiAA_01625 [Haemophilus influenzae PittAA]
Length = 296
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/290 (19%), Positives = 117/290 (40%), Gaps = 5/290 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL- 85
L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 8 VLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLPLITT 67
Query: 86 ---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
K+ + + + F++A L +G + YF+ P+I LG +LKER
Sbjct: 68 TLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWLKER 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L+ +Q IA LL + H+ ++ V + + I + +
Sbjct: 128 LSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGITLDI 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ I ++ S L L G++++ ++ +S ++
Sbjct: 187 ILISIPCFIYILSQSDTLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIFAVL 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 247 SYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 296
>gi|225024594|ref|ZP_03713786.1| hypothetical protein EIKCOROL_01471 [Eikenella corrodens ATCC
23834]
gi|224942643|gb|EEG23852.1| hypothetical protein EIKCOROL_01471 [Eikenella corrodens ATCC
23834]
Length = 296
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 84/294 (28%), Gaps = 16/294 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A +LW + ++ + ++ R++ + + + +
Sbjct: 1 MFYQIVALLLWSSAFIAAKYTYTMMEPELMLLFRLMIASVLALPLCLRYWRQIDA----- 55
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S + + ++P+++VF+G F +R +
Sbjct: 56 --RYWRGLLWLSFLNYVMVMMPEFVGAKYTSAASATTIIGLSPILTVFIGHFFFHDRAHW 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--------F 197
+ + + ++ T + S+ F
Sbjct: 114 FVWLCGVAAFAGVALLIAGGKSSGEISLWGCTLVMLGNTVFCAVLRPSQKMIEKVGVQAF 173
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + P L + H + + + +++ G+K +
Sbjct: 174 TSITMAVAPLLCLPASLTLADSLHIDWNWRGTLGLVYLGVCCSWLAYNLWNIGMKTVSAN 233
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
GI+ P+ +V IL + I + + +VV A + + +
Sbjct: 234 FSGILSALGPIFGAWLAVLILGEQISVLSWLGIVLVVAATLAAVFVPKWLRRRE 287
>gi|113866955|ref|YP_725444.1| DMT family permease [Ralstonia eutropha H16]
gi|113525731|emb|CAJ92076.1| permease of the drug/metabolite transporter (DMT) superfamily
[Ralstonia eutropha H16]
Length = 335
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 84/293 (28%), Gaps = 16/293 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P G + +L+ + + + V + VI+ R+L+++P + S L
Sbjct: 43 SPQRSGLVIAAVGAVLFSAKAIVAKLMYRYNVDAVMVITLRMLFAVPLFMAIGWWQSRRL 102
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L + ++ + L L F+TP + ++
Sbjct: 103 APLSWADRGR----VVFLGFIGYYLSSFLDFIGLQYITAGLERLILFLTPSFVLLATALV 158
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTI 188
+ + Q ++ LL ++++ H G L+ + + + +
Sbjct: 159 FRRPIAMRQWLSLLLAYAGIVLVFAHDLDVSGSQVWLGGALVLGSAMTYGIYLILSGELV 218
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S ++ L L+ +
Sbjct: 219 RRIGSLRLVAYAMCVSTACCVIQYLVLGRPVAELAQPAPVMWLSLVNAVFCTVLPVSLTM 278
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ R P+ + + ++L +P+ V+ +V+ M +
Sbjct: 279 VAVSRIGAPMASQAGMIGPVSTLFLAFWLLGEPVSGVQLAGSALVMGGMYLLS 331
>gi|77459141|ref|YP_348647.1| RarD protein [Pseudomonas fluorescens Pf0-1]
gi|77383144|gb|ABA74657.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 293
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/293 (20%), Positives = 123/293 (41%), Gaps = 7/293 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G A L+ + YT L +S +E+ R+L ++P + ++ + L LL
Sbjct: 3 KGIALSVTASTLFAVMYYYTSLLTPLSGVEIFGWRMLLTVPCMTVFMLVSGEWRRVLELL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ PK +G L+ S+ +L V F++A L S YF+ P+ V G + E
Sbjct: 63 RGLPALPKLIGGLILSSALLGVQLWLFMWAPLNGYSLDVSLGYFLLPLSMVLTGRIAYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L++LQ +A L +L G +L + V + Y RK + + G +++M
Sbjct: 123 NLSYLQKVAVFFASLGVLNELYQVGGFSWATLVVVVGYPLYFVLRKYLKTDNLGGLWVDM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A ++V G + + GL+++ ++ + S G
Sbjct: 183 TLMLPVAYWFVRGGEQGFGVFDQYPALTW--LIPLLGLISASALVVYIIASRLLPFSLFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ Y P+L++ ++ + + I + + + +A+VV + + + +
Sbjct: 241 LLSYVEPVLLLGVALLLG-ESIKPGEWLTYIPIWLAVVVLVFEGFKHLMRQRR 292
>gi|55377392|ref|YP_135242.1| hypothetical protein rrnAC0516 [Haloarcula marismortui ATCC 43049]
gi|55230117|gb|AAV45536.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 307
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 92/299 (30%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ LFV A I WG + LE + + R + + VY +
Sbjct: 1 MRFRNAILFVALA-IAWGSAFTAIKAGLEYFPPILFAAFRYDLAGLLMLGYAVYATDQW- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VF 138
+ + + + ++A + F + ++P+++
Sbjct: 59 ---VPKSRTDWIVVGIGGSLLIAAYHIFLFVGEQGTTSAAAAIVVSLSPILTTGFARAFL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTI 188
ERL L I+ L+ L + +++ + L+ LA A R+
Sbjct: 116 PDERLTTLGIVGLLVGFLGVGVLSNPDPGNLLNPRTVSLFLVFLAAASFALGSVLTRRFD 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
E +L + + + L + ++ F I+
Sbjct: 176 DDLEIETMEAWSMLLGAVLMHGISFGVSESVADVQWTTEAVLALLYLVVVASALGFLIYF 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++R + ++ Y AP++ + + L + + F +++ + + N
Sbjct: 236 DLLERLGPIEINLVSYAAPVVAAATGLLFLSETPTVYTGVGFTCILVGFGLLKRDALRN 294
>gi|42782148|ref|NP_979395.1| EamA family protein [Bacillus cereus ATCC 10987]
gi|42738073|gb|AAS42003.1| transporter, EamA family [Bacillus cereus ATCC 10987]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/299 (11%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTPSWGSLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + I+ + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVIIGEQINMMQLVGGLIIFIGLYVVKKGGMKK 294
>gi|163938744|ref|YP_001643628.1| hypothetical protein BcerKBAB4_0739 [Bacillus weihenstephanensis
KBAB4]
gi|163860941|gb|ABY42000.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPLVWF-----KEKKIIPPRAAIIPLVI 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGITGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVMLVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTVTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINSSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ IVV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQIFGTIIVVTGCYLFS 285
>gi|117921200|ref|YP_870392.1| hypothetical protein Shewana3_2759 [Shewanella sp. ANA-3]
gi|117613532|gb|ABK48986.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
ANA-3]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 80/266 (30%), Gaps = 12/266 (4%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
G ++ +F + + +R+L + ++ G + K
Sbjct: 20 GTIGVFARFAA-LPAEHITFYRLLLGALFLMAYMLLTGKGRQIRHKPSKRTLVN------ 72
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+LA F+I A+ Q ++ PV++ ERL H I +L ++
Sbjct: 73 GAMLAGFMAFYIEAIEYTQMATVIMIIYLAPVLASLFAHFVFHERLKHSSIATVVLALMG 132
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAY-----CFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
++M + L + + + + L ++ +
Sbjct: 133 FMLMLPVTSSQSLYDNEIMGYFYALLALLTYCGFILINRKPSAASPYQSTLVQLSVGALC 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
L + + T G + Y P++++
Sbjct: 193 LLPLVLTTPLVPSLNQFAWLLAIGFFPGFLAILFAVKALAQLPSVTYGTLSYVEPVVVVA 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMV 298
+ ++ + + T + + ++++A +
Sbjct: 253 LAWWLFDEALTTQQMLGVMLIMLAGI 278
>gi|311064644|ref|YP_003971369.1| drug/metabolite exporter family transporter [Bifidobacterium
bifidum PRL2010]
gi|310866963|gb|ADP36332.1| Transporter, drug/metabolite exporter family [Bifidobacterium
bifidum PRL2010]
Length = 320
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/309 (7%), Positives = 75/309 (24%), Gaps = 26/309 (8%)
Query: 27 TLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL----- 80
+ ++WG + Q + +S L + R + +++
Sbjct: 1 MACLVLTSLIWGFAFVSQVQGMASMSPLFFNATRFTLGAISLIPLLLWKRLRRCRESGKT 60
Query: 81 ---------------LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
+ + + + ++ + A + F
Sbjct: 61 VGAGNREAGDDEHDMIVGSALSNPLIVGMICGVFLFAASTLQQYGIMFGCSAGRAGFITA 120
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-----LSLAIAVTWSA 180
+ V+ L + L+ + + +A + + ++ + G L A
Sbjct: 121 LYIVMVPLLAYLVLRRAVRMMTWMAVGVAVAGFYLLCITDGFGSLTLADCLLLFTAVLFA 180
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + A G + L
Sbjct: 181 AHILSIDTLGACVDALTLSFIQFVTTAALSWAGTLIEGSMDWNGAGQAWIAVLYAGIGSV 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + G + + ++ + ++ +L + + + ++ +V+
Sbjct: 241 GVAYTLQAVGQQWVPPTRASLIMSLESVFSVIGGALLLGETMTVRGYLGCALIFAGIVLA 300
Query: 301 LLPTVINSG 309
P V
Sbjct: 301 QTPGVGRRR 309
>gi|271501184|ref|YP_003334209.1| hypothetical protein Dd586_2662 [Dickeya dadantii Ech586]
gi|270344739|gb|ACZ77504.1| protein of unknown function DUF6 transmembrane [Dickeya dadantii
Ech586]
Length = 287
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 76/262 (29%), Gaps = 8/262 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+L+G++ + + L VS +++ R ++ ++ K
Sbjct: 12 LCTMLFGLSAVLAKQLT-VSASSIVAGRAFFATLT----LLLVLVCTRSYTLNSLTRKDW 66
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ + +LA+HW F + + + + P+ G + + ++A
Sbjct: 67 FHYLMNGVLLALHWVCFFTGVERGGVAVGTLGFACFPIFVSVFGWCIFRSYVGWRDVLAM 126
Query: 152 LLIILSLLIM---TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
LI L+++ + G +L A+ A +
Sbjct: 127 FLIAAGLIVISPNIVVGGSDRNALLWALAAGASYAIIVLYNNHAKTSGTPLQSSFIQCMF 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+V G + + + + +Y ++ ++ P+
Sbjct: 187 CAIVVTPMGAGGIMQADFSSLLHIIFIGVVCTGVAYSMLTYVLRYVDAGKAAVIISLEPV 246
Query: 269 LMIVSSVFILKQPIDTVRTIVF 290
I S+ DT +
Sbjct: 247 WAITFSIVWFGTAPDTRTLLGG 268
>gi|237753129|ref|ZP_04583609.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375396|gb|EEO25487.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 73/280 (26%), Gaps = 3/280 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G F + LW + + LE S LE++ + + +
Sbjct: 2 RALGHFLAFASVFLWSSLYVSVKILLEVFSPLELLFLQFIIGYCFLLLIAPRLLKSALKS 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFL--TSFSYFVTPVISVFLGSVFL 139
+ G+ +++ + + + I F
Sbjct: 62 ELYFLLAGLCGITIYNLFLNLAMDISKASNVSVIIATAPLFTALLANFLKIEKLSFVFFP 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
L I+ L + LS +S
Sbjct: 122 AFVLCMSGIVLLSYEEGGFAFNPLGDTLAFLSALGWAAYSLLILKIMQKANNLILVTRRI 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + L + FS L L F +++
Sbjct: 182 IFYGILGMLPSFFFLDFSPNLANLLDLKVTLNLLFLSLFAGGLCFLLWNRATLLIGAVKT 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I Y P++ I++S F+L++ + + + + ++ +++
Sbjct: 242 NIYVYLTPIITIITSFFVLEERLSMLALVGAFLTLLGVIL 281
>gi|229179332|ref|ZP_04306686.1| Transporter, EamA [Bacillus cereus 172560W]
gi|228604230|gb|EEK61697.1| Transporter, EamA [Bacillus cereus 172560W]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/300 (10%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + ++ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQMNMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|222148737|ref|YP_002549694.1| hypothetical protein Avi_2368 [Agrobacterium vitis S4]
gi|221735723|gb|ACM36686.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 311
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 88/270 (32%), Gaps = 6/270 (2%)
Query: 39 ITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
I+ + ++ +S E L+ L + F + + + + + +
Sbjct: 22 ISDASVKLVDGRISPFESAFFGSLFGLAALPFLLKRGDSLTDVFRTSNLKLWLLRFVASG 81
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+ + + A F+ P + VFLKE++ + A ++ +
Sbjct: 82 TSAIGA-----VTAFTHLSMAEAFCLIFLLPCFVTIMSVVFLKEQVGMRRWSAVIIGFIG 136
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
+L++ L + A + + + A ++ +G +
Sbjct: 137 VLVVLRPGFRELSIGHLGAVIGGLGGAISIVVYRAIGPREKSTSLYGAGAFGTIIISGIA 196
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
F D L L+ YGL + + + A + +G +Y+ L I+ I
Sbjct: 197 MLPAFSWPQGTDWLLLLSYGLFAALATVLMMLATRFAPAAVLGPAQYSQMLWAILFGYLI 256
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+D + +++ + ++ L+
Sbjct: 257 FGDHVDLPMLVGITLIIGSGLITLMRERTK 286
>gi|91776708|ref|YP_546464.1| hypothetical protein Mfla_2356 [Methylobacillus flagellatus KT]
gi|91710695|gb|ABE50623.1| protein of unknown function DUF6, transmembrane [Methylobacillus
flagellatus KT]
Length = 305
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 90/281 (32%), Gaps = 16/281 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + L+ + + R + + +V L K + ++
Sbjct: 22 WGYNWVVMKHALDYAGAFQFGAMRTFYGAVCLMALLVLMRKPL-------KPREVPTLIW 74
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
G I+AL+ T+ + P + L L E++ +Q +A L +
Sbjct: 75 LGVLQTCGFTGLIIWALVEGGAGKTAVLTYTMPFWVMVLAWPLLGEKIRGIQWLAVLFSV 134
Query: 156 LSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ LL + + ++ S + V + + + +
Sbjct: 135 MGLLFILDPLHLGSDLFSMSLAILGGVFWAISVIVAKKLHQRVPDLDLMSLTAWQMLFGS 194
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L V L L N+ + ++ Y ++ + AP
Sbjct: 195 LPLVAVAFIVPAPPIDWSINFIGAVLYNAVLCNALAWLLWLYALQHLPAGIASMTSLLAP 254
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ ++++ + L + + I ++ +A+++ L ++
Sbjct: 255 VIGVLAAWWQLGEEPERGEVIGMILIGVALLIISLHSMKRR 295
>gi|327440664|dbj|BAK17029.1| permease of the drug/metabolite transporter superfamily
[Solibacillus silvestris StLB046]
Length = 299
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 90/288 (31%), Gaps = 13/288 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + WG++ + LE + V++ R L + + +++
Sbjct: 9 ILMVIVTMFWGLSYTFMVMGLESLEAFNVVALRCLIAFIIAGLIFLPKMLRVNIKTILYA 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + A L L T F +T V+ + S K +
Sbjct: 69 SIQGFLLFTIFALSLLG--------LKTTSAGNAGFILSLTVVLVPIMTSFIEKRLPSRA 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A + ++ + ++TL + + + A + + + E +
Sbjct: 121 VSFAVVATMIGITVLTLKESLTFQTGDLLVAIAAVCYSIYLILNSKFTKNVESISYGVYQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L I LF V+ F + L + +F F + + + G++
Sbjct: 181 LGIAGLFGAVFTMMFESPMFPSNSSSWIAVLGLGIICTAFCFIAQAVVQQYTSPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P+ + ++ L + + I ++I V L I K
Sbjct: 241 FSLEPIFAALFAMIFLGEGLTAQLVIGGSFILIGNTVAQLEQFIAMKK 288
>gi|260172792|ref|ZP_05759204.1| hypothetical protein BacD2_13068 [Bacteroides sp. D2]
gi|315921078|ref|ZP_07917318.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694953|gb|EFS31788.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 94/284 (33%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R L + G++
Sbjct: 10 LIAILVVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVI-------SPKRLFAG 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q +F P+++ L + E+
Sbjct: 63 NWKDELWLMAGGFFGGSLYFFTENTALGITQASNVAFIICTAPLLTTILSLLFYKSEKAT 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I ++L ++ + ++ + L + + + + T +
Sbjct: 123 KGLIYGSILALIGVGLVVFNGSFVLKLSPVGDLLTLLAALSWAFYSLVIKKMTGRYPTVF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + L + + L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFLLHPLQPDFDVLLKPVVLSNLLFLAVLASLVCYVLWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y PL+ +V+S+ IL + I + + G ++ +
Sbjct: 243 GTVRASNYIYLNPLVTMVASIIILHEQITWITLLGAGCIIFGVY 286
>gi|261379241|ref|ZP_05983814.1| integral membrane protein [Neisseria subflava NJ9703]
gi|284797665|gb|EFC53012.1| integral membrane protein [Neisseria subflava NJ9703]
Length = 291
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/297 (10%), Positives = 90/297 (30%), Gaps = 17/297 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++WG + + ++ + + ++ R+L + V + +
Sbjct: 1 MFYQILALLIWGSSFIAAKYSYEMIDPALMVEARLLIAALMVLPSC-------RRHLGRI 53
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +L S V L + P++ VF+G F ++
Sbjct: 54 PRSEWKPLLWISFVNYVVVLMLQFIGLKYTSAASAITMVGLEPLLVVFVGHFFFSDKAKI 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGF 196
I + + +M + ++ + ++ + +
Sbjct: 114 YHWICGAVAFAGVGMMVMGGAEEGGTIDWFGCLLILLAGLGFAGVIRPSQQMIARIGAPA 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F + L + L + + +++ G+ +
Sbjct: 174 FTVASMAVAAVLCLPFSLVLADSYQINWSWGGTLSILYMGIGCSWLAYLLWNKGMNKVPA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ G++ P++ ++ +V IL + + + + +V+ + V + I + K
Sbjct: 234 NVSGLLISLEPVIGVIMAVLILGEHLSAMSAMGITVVIASTFVAGMLARIGNKHKKA 290
>gi|222149883|ref|YP_002550840.1| hypothetical protein Avi_3918 [Agrobacterium vitis S4]
gi|221736865|gb|ACM37828.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 285
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 93/281 (33%), Gaps = 7/281 (2%)
Query: 30 VFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +++ + + L + +V+ R + +L + +V + +
Sbjct: 1 MLAGMLMFALNDAMAKALVAHYGLGQVVVLRSVAALLILLPFLV------RGGFAPILSV 54
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ M + T V F YA+ + P+ L E+L +I
Sbjct: 55 ERPWMQLARVTCSTVEIIGFYYAVSYLPLADVMTYWLAAPIYVAACAPFLLGEKLGWRRI 114
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A ++ + ++I S + A+ + FA + S ++ VL
Sbjct: 115 TAIVVGFIGVIITLEPSRAMFSAPALISIIGSAAFAFMMLSGRSLRATPDKLLVLFQVTA 174
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
V F+ + +G+ D + L G++ + + +K + + V ++YT L
Sbjct: 175 ALVGGLFFAPFDWVEIGSATDIVMLGLLGIVAMAAHMLVNRALKISDAAAVAPLQYTLLL 234
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ T I +++ + + +
Sbjct: 235 WAVLFGWLFFGDVPRTGMVIGAALIIGSGLFIFFRERHLNK 275
>gi|254488872|ref|ZP_05102077.1| permease [Roseobacter sp. GAI101]
gi|214045741|gb|EEB86379.1| permease [Roseobacter sp. GAI101]
Length = 308
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 94/300 (31%), Gaps = 16/300 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G + I+ I + L V + EV+ R L + +
Sbjct: 5 RPLIGIALMLGFCIVAPIGDAVAKLLGASVPLAEVVFIRFAVQLIVLLPLVWATHRPWR- 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + + AL FV P + LG FL
Sbjct: 64 -----MDRTTLLLTFLRTVLHIIGIAAMFTALTHLPLADAIAIVFVMPFFMLVLGKYFLS 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + +++A L+ L++ S + A+ + A + + +
Sbjct: 119 EEVGSRRLLACLVGFAGTLLVIQPSFTQVGWPALLPVFVAANLSVFMLVTRKIAKQTDPI 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFL---------GNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ AI + VV + L L+ GLL + + ++ +
Sbjct: 179 SLQAISGIMAVVLMVPLLWFGPRTGIAALEVTAPDSIQWLLLLSIGLLGTVAHLLMTWSL 238
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ A +T+ M+Y V + I + + ++ GI + A + +L +
Sbjct: 239 RYAPSATLAPMQYLEIPFATVLGLLIFGDLPNALASVGIGITIAAGLFVILREGAIQRRQ 298
>gi|196035156|ref|ZP_03102562.1| transporter, EamA family [Bacillus cereus W]
gi|195992220|gb|EDX56182.1| transporter, EamA family [Bacillus cereus W]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFTLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 285
Score = 35.7 bits (80), Expect = 9.2, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|157825236|ref|YP_001492956.1| S-adenosylmethionine transporter [Rickettsia akari str. Hartford]
gi|157799194|gb|ABV74448.1| S-adenosylmethionine transporter [Rickettsia akari str. Hartford]
Length = 294
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 89/297 (29%), Gaps = 8/297 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + +++L + EV R +S + +VY+
Sbjct: 1 MNDALKTYLTGIGWFLLSLASSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
S + + +L + Y L + F P+ ++ L
Sbjct: 61 SKN-------TLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLTL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E + + + ++ + L++ + +A FA I
Sbjct: 114 AVFFLNENIIWQRWVVTVVGFIGLVVTLKPHAQDFNPEILYFVLAAISFAMLDIINKKFI 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ + + +++ + + L G S +
Sbjct: 174 IKESMISMLFYSAIVTAIVSLPVASQYWLTPSGFELALLFVLGSSGSLILFFLLKAFSMV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y ++ +++ FI + D I++ A + + +
Sbjct: 234 DATATAPYRYLELVISAITAYFIFNEFPDKNTLHGAVIIIPATLFIIYSEKKAMSRK 290
>gi|124267106|ref|YP_001021110.1| hypothetical protein Mpe_A1917 [Methylibium petroleiphilum PM1]
gi|124259881|gb|ABM94875.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 297
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 16/301 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +LW I + T+ L+ EV R L++ + A+ G
Sbjct: 1 MTHGRAVTLMIVVTLLWSIAGVVTRHLDAARSFEVTFWRSLFNALTLTVALSAMRG---- 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+A + S A + F+ A+ + + P+I+ +FL
Sbjct: 57 AALWRGLLRAPWPVWASGLCWATMFTAFMVAITLTTVANVLVTMAIGPLITALFARIFLH 116
Query: 141 ERLNHLQIIAALLIILSLLIMTL---HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF- 196
RL IA + + + M +G+ L IA+T T+ +S G
Sbjct: 117 HRLPARTWIAIAVGGIGIAWMFGQEAGAGMSLTGTLIALTVPLAAATNWTVLQYASHGPA 176
Query: 197 --------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+M + + L + + + +
Sbjct: 177 DPDEAAVATQDMLPAVLIGGLLSAVVALPLAWPLQASDHDLGLLGLLGAVQLAIPCLLVV 236
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + ++ L + + + +V+ A+VV +
Sbjct: 237 RLTRELPAPEIALLGLLEVLFGVSWAWLGAGERPGPSTLTGGALVLGALVVNEALALRQR 296
Query: 309 G 309
Sbjct: 297 R 297
>gi|219668077|ref|YP_002458512.1| hypothetical protein Dhaf_2039 [Desulfitobacterium hafniense DCB-2]
gi|219538337|gb|ACL20076.1| protein of unknown function DUF6 transmembrane [Desulfitobacterium
hafniense DCB-2]
Length = 301
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/274 (10%), Positives = 74/274 (27%), Gaps = 3/274 (1%)
Query: 30 VFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ILWG + ++ + ++ R ++ + A+ + + K TL+
Sbjct: 9 ILIVTILWGASFAVSKLIMADITPNYYTFLR--FAGAFLVLALCFHKRLRHIPKQTLQAG 66
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+G+ + +L + A + L
Sbjct: 67 VIIGLAIACGYVLQTMGLNYTSASKAGFLAGLYVVLVPVMESFLCKTLPRYNMILGVFLA 126
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A L ++ T+ G L+ + + + I +
Sbjct: 127 TAGLALLSLERDFTIGFGDLLVFVGAVFFAVSMVLISRFASKHDPMVLAIIQIGVTALFS 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ G L L + + ++ +T ++ P+
Sbjct: 187 LVLAMFTEPGLSPAQFTPALLGLVLFAILFGTAVNTAVQNWAQGYLTATTAALIFVLEPV 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
V ++ I + +++ M+V LL
Sbjct: 247 FAGVFGWLLVGDVIGMKQISGSALIISGMLVTLL 280
>gi|315127002|ref|YP_004069005.1| permease of the drug/metabolite transporter [Pseudoalteromonas sp.
SM9913]
gi|315015516|gb|ADT68854.1| permease of the drug/metabolite transporter [Pseudoalteromonas sp.
SM9913]
Length = 289
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 96/293 (32%), Gaps = 17/293 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + A LWG T + VS L + + + + L
Sbjct: 1 MAIIVASFLWGTTGTAASYSPDVSSLAIGAFSMGIGGVLLVITARKKLLIDYKLMLEQPK 60
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+G+ + LA + + + + P + L + K+ ++
Sbjct: 61 IFLLGVTSVAIYPLAFYTSMRLSGVAIGTVVSIAT----APFFAGILERLISKKDISLQW 116
Query: 148 IIAALLIILSLLIMTLH-------------SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+++ ++ + + ++TL G+ ++ IA A + S
Sbjct: 117 MLSFVIGAIGIALLTLGKDQSNNNAYSINQQGLGIILGCIAGLTYAGYSWAARCLIESGV 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
M L A ++ + + G++ F + + L + + +F +G+
Sbjct: 177 HSTSSMSGLFGCAALLLLPSLWFTGDNLFSSSSNAFVSLYMAIIPMFLGYLLFGFGLNYI 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S ++ PL+ V ++ I+ + + +V + +++ + N
Sbjct: 237 DASKATLITLIEPLVATVLAIVIIGEKFKVIGWAGVALVSLCLLMQTIKPQKN 289
>gi|296185557|ref|ZP_06853966.1| membrane protein, putative [Clostridium carboxidivorans P7]
gi|296049685|gb|EFG89110.1| membrane protein, putative [Clostridium carboxidivorans P7]
Length = 287
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 88/286 (30%), Gaps = 13/286 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + IL+G ++ + + + +++ + + ++ +F
Sbjct: 2 KKGYGYSIISAILFGTAGIFVKLSLKIGLDSISLLTVQYIIAVFLMFTTAFITGKE---- 57
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + + + + F+ A + + F P++ + +F K+
Sbjct: 58 KLNITKIQLIRLSILGVVGNTFMTIFYYKAFEYLPVAMVTMLLFTYPIMVLIYSIIFHKQ 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSE 194
L+ +I+ + L L+ ++ + A+ + +
Sbjct: 118 NLDKRKILVIFMAFLGCLLTLNILVGNFKYSIKGVIFGLLSALFYAFMNLYTEKKLFELD 177
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I + +++ + + I + + IK
Sbjct: 178 SLSINAYSTLFSLISLLIYRWPTFLFKENIQINALIYVAILAIVCEVIPLTLLYGSIKYI 237
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
V I+ ++ S FILK+ + + I +V A+ +
Sbjct: 238 GALKVSIISNLEIPTAMIVSSFILKEQVTYTQVIGALFIVYAVYLI 283
>gi|212702530|ref|ZP_03310658.1| hypothetical protein DESPIG_00548 [Desulfovibrio piger ATCC 29098]
gi|212673971|gb|EEB34454.1| hypothetical protein DESPIG_00548 [Desulfovibrio piger ATCC 29098]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 84/294 (28%), Gaps = 18/294 (6%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG T + + LE + R ++ + +
Sbjct: 19 LVLITMIWGATFIIIRSALEATGPFFFVGVRFAFAALALILFSLPLLKDF--------TW 70
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ V + + + L T ++F + L + +K + +
Sbjct: 71 REVWAGMSIGLCIFGGYALQTCGLQTITASKSAFITAFYVPLVPLLQWLVMKRPPHLMAW 130
Query: 149 IAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ L +L+++ G + AI+ A + S + +
Sbjct: 131 VGIALAFPGVLLLSGPDDSSAGFGWGEMLTAISALAIAMEIILIGLVARSVNARRVTIVQ 190
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + +L G + + ++ K+ + ++
Sbjct: 191 VLMASLLSFATMPLVGESVPPPSWLVLGSAFALGVSTAGIQY-AINWAQKKVSPTRATLI 249
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL-PTVINSGKNKTKK 315
P+ + + + + + +++ ++V L P GK+ ++
Sbjct: 250 YSCEPVWAGIFGRMA-GERLPGLALLGGAMILAGVLVSELKPGSRKKGKDAARE 302
>gi|169797637|ref|YP_001715430.1| hypothetical protein ABAYE3709 [Acinetobacter baumannii AYE]
gi|215484991|ref|YP_002327232.1| hypothetical protein ABBFA_003358 [Acinetobacter baumannii
AB307-0294]
gi|301512292|ref|ZP_07237529.1| hypothetical protein AbauAB05_11942 [Acinetobacter baumannii AB058]
gi|169150564|emb|CAM88473.1| putative membrane protein [Acinetobacter baumannii AYE]
gi|213989031|gb|ACJ59330.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
Length = 306
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 86/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + L
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFLSVWRQRRLVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + + Y F +
Sbjct: 128 FAVFGSILSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKKWQLPLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVLFHLPLIFWFGLDALNSQNAPSAIYAGVFASLIAPLVWMLAVQQLGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + + L + T ++++ +++
Sbjct: 248 RTSIFMNLVPVFTAIIASIWLSEQWTIYHTFGGIMILVGIIM 289
>gi|303251022|ref|ZP_07337208.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252684|ref|ZP_07534576.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|302650032|gb|EFL80202.1| permease [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306859860|gb|EFM91881.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 280
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 107/281 (38%), Gaps = 6/281 (2%)
Query: 33 AYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK---NPK 89
A L+G+ + L ++ + +R++ P + AI+ F + K NP
Sbjct: 3 ANFLFGLGYYFAILLRPLNGESMFGYRIVVLAPFILLAILLFKQTNKFQQLWQKIKQNPP 62
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V +L+ A + F++A Q S Y + P+++V LG + KE L+ +
Sbjct: 63 LVLVLLLLALNTGIQLWLFLWAPNNGQAIEVSIGYLLLPIVAVALGKIVFKEHFTLLKWL 122
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ ++ + +G + +A + L + F
Sbjct: 123 SLGFAVIGVASNIWLTGSFSWATIVAGIGYPLYITLRRYFE--INTLATFFVELLLVMPF 180
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + N FL +GL+N F ++ ++ +G++ Y PL+
Sbjct: 181 AGYFIDQTDMQPILANNQHIYYFLALFGLVNGAAFILYIASSNLLPVNVLGLLGYVEPLV 240
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
M+ S I + +D+ ++ + +A+++ + + +
Sbjct: 241 MLCVSFMI-GEVLDSKSYLLMICLALAIILLTVDNFRLTRR 280
>gi|253689179|ref|YP_003018369.1| hypothetical protein PC1_2803 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755757|gb|ACT13833.1| protein of unknown function DUF6 transmembrane [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 297
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 85/277 (30%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A ++W + + + + + +R L + + ++ +
Sbjct: 9 LFPTIAVLIWSVNVIVNKLSASVIDPAAISFYRWLLAFLVMTPFMLPTLRQHATTIRQHA 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V L+ ++ + G + S +T ++S+ L + +
Sbjct: 69 WKLLVLGLLGMVLYQSLAYYAAHSISAVMMGIMGSLIPLLTVLLSIPLLRIAPTLGVLLG 128
Query: 147 QIIAALLIIL----SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I++ II L GI + +Y +
Sbjct: 129 SILSLAGIIWLIGEGHPEQILAQGIGPGEFMMFCASLSYALYGVLTKRWNIPLPNWVSLY 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ I V+ F ++ L L + + + ++ G+ R S I
Sbjct: 189 VQIAFGVVVLIPNFLLTDNVQLNAQNLPLVIFAGIMASIIAPFLWIQGVMRLGASKAAIF 248
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + ++ L +P+ I GI ++ +++
Sbjct: 249 MNLTPIFTAMIAIGFLHEPLHHYHLIGGGITLLGVIL 285
>gi|229145648|ref|ZP_04274031.1| Transporter, EamA [Bacillus cereus BDRD-ST24]
gi|228637894|gb|EEK94341.1| Transporter, EamA [Bacillus cereus BDRD-ST24]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 89/292 (30%), Gaps = 17/292 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ ++WG ++ + +S ++ S R L + P + L + +
Sbjct: 3 WLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLRIERKDWL 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ ++ F+ ++ S ++P+ + L + +ER +
Sbjct: 63 R-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMK 117
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIPVGSSEGF 196
I +++ + + L + A + +
Sbjct: 118 VQIGSIVAFIGAAFVLLTGHTGGTTYEYAWLGNIIGLVAAIAWGWYPILAQPLITKYSAM 177
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ I + VV+ F+ + F ++ GI +
Sbjct: 178 RVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMWYVGISKIG 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 238 STKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 289
>gi|207722568|ref|YP_002253004.1| permeases of the drug/metabolite transporter (dmt) superfamily
protein [Ralstonia solanacearum MolK2]
gi|206587750|emb|CAQ18332.1| permeases of the drug/metabolite transporter (dmt) superfamily
protein [Ralstonia solanacearum MolK2]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 92/297 (30%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++W + ++ V + +R L + + F +
Sbjct: 1 MLYPLLAVLVWAANTIISKAAAGVVDPAAISFYRWLIAAVVLTP----FWARPLWRQRRE 56
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V + L ++ YA + + P++ + + SV ++ +
Sbjct: 57 VLPWLPRLSVLALLGLVLYQCLSYYAAHSTSATNMGVICALIPMLGLIINSVVFRQPVGA 116
Query: 146 LQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + +L +L + L G+ + + + +AY +
Sbjct: 117 PAVAGVAVSLLGVLYLLGRGHPASLLDGGVNHGDVLVVIGSAAYALYNILYRRWAPPFGQ 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L ++ + + + L + + G+ R
Sbjct: 177 WMNLYLQALLAVVMLLPLALTAQSLAVPRQGIGMVLFAGIGASIVAMYWWMLGLARLGSE 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+M P+ V + +L + + I G++++ + + + G+N+ +
Sbjct: 237 RTVVMMNLLPVFTAVMASAMLGETVQGYHWIGGGLILLGVSLVQGIVTLPMGRNRLR 293
>gi|157964142|ref|YP_001498966.1| S-adenosylmethionine transporter [Rickettsia massiliae MTU5]
gi|157843918|gb|ABV84419.1| S-adenosylmethionine transporter [Rickettsia massiliae MTU5]
Length = 296
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/299 (11%), Positives = 89/299 (29%), Gaps = 8/299 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ +A + G + + + + +++L + EV R +S + +V
Sbjct: 1 MLMNDALKTYLTGIGWFLLSLVSSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
Y+ + + +L + Y L + F P+ ++
Sbjct: 61 YYGKN-------TLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTL 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L FL E + + + ++ + L++ + +A FA I
Sbjct: 114 ILAVFFLNENIIWPRWVVTVVGFIGLVVTLKPHAEDFNPEILYFVLAAISFAMLDIINKK 173
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ +L A+ + + +++ + + L G S +
Sbjct: 174 FVIKESMISMLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFS 233
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y ++ +++ FI + D I++ + + +
Sbjct: 234 MVDATATAPYRYLELVISAIAAYFIFNEFPDKSTLHGAVIIIPTTLFIIYSEKKAMNRK 292
>gi|47564513|ref|ZP_00235558.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
gi|47558665|gb|EAL16988.1| transporter, Drug/metabolite exporter family [Bacillus cereus
G9241]
Length = 274
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/274 (9%), Positives = 88/274 (32%), Gaps = 10/274 (3%)
Query: 40 TPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSA 98
+ +++ L+ + L ++ R + + ++ + T++ +
Sbjct: 1 MYVVSKYVLDFIPPLTLVWLRFIIAFVVLYMILKIT-ETKQKKTVTIRKKDWLLFAWIGF 59
Query: 99 TILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL 158
+ S TP V ++ LKE+L ++++ ++ + +
Sbjct: 60 IGYFISITCQFIGTKLSDAHTGSLVTSATPAFMVIFAAIILKEKLTARRMLSTIIATIGV 119
Query: 159 LIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+I+ G +L A + + SS ++ +
Sbjct: 120 IIVIGWDIEIGSYFIGTIILVGAAITWALLSIYVKIASAQFSSLVITTYAIFFSLFFITP 179
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ F + L + + F +++ G++ S + + P++
Sbjct: 180 FMIWEFQSNPIEHMNLYVVLGILYLGIVSTAGAFFLWNKGLELMDASIGSLFFFFQPIVG 239
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ F+L + +++ I +++ ++ +
Sbjct: 240 SLLGWFLLNETLNSNFFIGGILIICSVFITTFEK 273
>gi|328883179|emb|CCA56418.1| Permease of the drug or metabolite transporter (DMT) superfamily
[Streptomyces venezuelae ATCC 10712]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 90/284 (31%), Gaps = 7/284 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
GT+ + A +L G ++ S EV+ R L+ + SG
Sbjct: 2 RNETRGTVELTLAMVLSGTLGVFVVE-SGASPFEVVFFRCLFGALALGVY----SGVRGF 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +G+ + +W F A L + Y P V LG++FL+
Sbjct: 57 FTGHGFTGRKLGLAALGGAFIVFNWVFLFEAYQATSISLATVVYHTQPFFLVLLGALFLR 116
Query: 141 ERLN--HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
ER++ L + + L L+ L +A +A T G
Sbjct: 117 ERISAGKLGWLGLAFVGLVLVSGVRPGETASLKGLGFALAAAVLYALATFVTKRITGVRP 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ L + + F+ + + ++ + + +
Sbjct: 177 HLIALVQVLVGLPLLLPFADFGAAAKLGAGWGWLVGLGLIHTGLMYVLMYAAYAKLPTAK 236
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ ++ +T P + + + I V+ + ++V A + L
Sbjct: 237 IAVLAFTYPAVAMGVDWAVYGHHIGLVQALGVPLIVFASLKVTL 280
>gi|317055505|ref|YP_004103972.1| hypothetical protein Rumal_0806 [Ruminococcus albus 7]
gi|315447774|gb|ADU21338.1| protein of unknown function DUF6 transmembrane [Ruminococcus albus
7]
Length = 291
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 80/289 (27%), Gaps = 6/289 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ + A + + + ++ L + ++ + + L + GV ++ +
Sbjct: 4 KLKAVFYAIAAAVFYALNVPCSKLLLERIAPTYMAAFLYLGAGAGVGIMYLFHHKHEAQT 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K + + I+A + + S V + + KE
Sbjct: 64 ERLEKKDMPYTVGMVLLDIIA--PILLMLGVKLGTSANASLLGNFEIVATTLIALFIFKE 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFI 198
++ A LI LS +I++L + + +A S+
Sbjct: 122 KVIRRLWAAIGLITLSSIILSLGGEDSFTFSVGSLLVLGATACWGLENNCTRSISDKSTY 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + ++ + + K +
Sbjct: 182 QIVTIKGFGSGTGSLIVAIIIGEKLPEIKYILPAVVLGFVAYGLSIFTYIRAQKTLGAAK 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+P + S +L + + V I +++ + T+I
Sbjct: 242 TSAYYALSPFIGAFLSFILLHESLTIVYLIALAVMIAGTAFVVSDTLIQ 290
>gi|298293413|ref|YP_003695352.1| hypothetical protein Snov_3459 [Starkeya novella DSM 506]
gi|296929924|gb|ADH90733.1| protein of unknown function DUF6 transmembrane [Starkeya novella
DSM 506]
Length = 322
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 82/288 (28%), Gaps = 7/288 (2%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + + + + ++ L ++ RV +F + L + +
Sbjct: 32 LVLLSMIWGGSFFFGKVAIAEIPPLTMVLGRVGIGTAALFVIARLSGVRVPLNRRLVAEF 91
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL--GSVFLKERLNHL 146
+ ++ + W + F V+ +F + + +
Sbjct: 92 ALMAVIANIIPFGLIAWSQQHIPSGLSSILNAATPIFTVLVVQIFSREEKLTAGKLFGVV 151
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC----FARKTIPVGSSEGFFIEMCV 202
A + +++ ++ G L + A+ + + G +
Sbjct: 152 LGFAGVAVMMGPALLGQLGGHHLPAQLAAIGATISYGFAAVYGRRFRHMPPLGVALLQLA 211
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L V E L + ++ + R + + ++
Sbjct: 212 ASAILLAPVALLLDRPWELPVPSLHVIGALTGLGVLSTGIAYILYFRILARNGATNISLV 271
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P+ I+ IL + ++ F I+ + + +
Sbjct: 272 TFLVPVSAILLGALILGEEMEPREFAGFAIIALGLAAIDGRPARWLAR 319
>gi|296103578|ref|YP_003613724.1| hypothetical protein ECL_03240 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295058037|gb|ADF62775.1| hypothetical protein ECL_03240 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 304
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 85/288 (29%), Gaps = 4/288 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G LF YI+WG T + +E L + R L + + ++ L L+
Sbjct: 9 LIGALFSL--YIIWGSTYFVIRIGVESWPPLMMAGIRFLSAGVLLMAFLLLRGHKLPPLR 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L +L+ + + F S G K
Sbjct: 67 PMLNAALIGLLLLAVGNGFVTVAEHQNVPSGIAAVVVATVPLFTL-CFSRLFGIRTRKLE 125
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ I A +I+L+ + + + I A+ + S + +
Sbjct: 126 WLGIGIGLAGIILLNSGGNLSGNPWGAVIILIGSMSWAFGSVYGSRIELPSGMMAGAIEM 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
LA + + + + + I+ +
Sbjct: 186 LAAGIVLLIASMLTGETLTTMPDLSGFLAVGYLALFGSIIAINAYMFLIRNVSPAVATSY 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + V + G++V A+V+ L + K
Sbjct: 246 AYVNPVVAVLLGTGLGGETLSPVEWLALGVIVFAVVLVTLGKYLLPAK 293
>gi|229097572|ref|ZP_04228531.1| Transporter, EamA [Bacillus cereus Rock3-29]
gi|229116569|ref|ZP_04245956.1| Transporter, EamA [Bacillus cereus Rock1-3]
gi|228666879|gb|EEL22334.1| Transporter, EamA [Bacillus cereus Rock1-3]
gi|228685842|gb|EEL39761.1| Transporter, EamA [Bacillus cereus Rock3-29]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/300 (10%), Positives = 91/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ ++ ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERNDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 241 YVGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 300
>gi|229149896|ref|ZP_04278124.1| Transporter, EamA [Bacillus cereus m1550]
gi|228633577|gb|EEK90178.1| Transporter, EamA [Bacillus cereus m1550]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQELKHSSL----AGLMVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIP 189
K++ ++ + L ++T L I A F++K P
Sbjct: 120 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSISLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|229182796|ref|ZP_04310035.1| Transporter, EamA [Bacillus cereus BGSC 6E1]
gi|228600676|gb|EEK58257.1| Transporter, EamA [Bacillus cereus BGSC 6E1]
Length = 316
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 23/298 (7%)
Query: 29 FVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGGLS 79
A LWG + + + EV +R S + F ++
Sbjct: 16 AAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKLLGKDMN 75
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV-F 138
K T K ++ + + F + G + + + L +
Sbjct: 76 FKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHFLY 130
Query: 139 LKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ LN +II + +++ ++ H GI L L A +Y
Sbjct: 131 KDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEGS 190
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 191 KTLDVGYMTAYQMIFGSIGLLCIGTLQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWNTI 250
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 251 MKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|261419527|ref|YP_003253209.1| hypothetical protein GYMC61_2111 [Geobacillus sp. Y412MC61]
gi|319766343|ref|YP_004131844.1| hypothetical protein GYMC52_1236 [Geobacillus sp. Y412MC52]
gi|261375984|gb|ACX78727.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y412MC61]
gi|317111209|gb|ADU93701.1| protein of unknown function DUF6 transmembrane [Geobacillus sp.
Y412MC52]
Length = 292
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 79/288 (27%), Gaps = 4/288 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++ + ++ A +WG + +++ L+ + L ++ R +L +
Sbjct: 2 KQTVLASFYLSLAAGIWGGMYVVSKYVLDYIPALTLVWMRYAVALIVLGAIAAVKRERPP 61
Query: 80 LLKDTLKNPKAVGMLVFS---ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
A+G++ + + + +F + +
Sbjct: 62 KSGRDWGMVIAIGIIGYVVSISLQFVGTKWSNAHTASLITASTPAFVVLFARWLLGEALT 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L +++ L + +G L A + S
Sbjct: 122 WRKTSALLLATSGVIVIVGLGGGGESTLAGNMALVGAAITWALLSVLVKIASARLSVLSI 181
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
A + ++ G L + + F +++ G++
Sbjct: 182 TTYAIFTAFIGMTPMMLTEGPGLAASHWSVPVALGVLYLGVVSTAGAFFLWNKGMEMIDA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + PL+ +L + + + ++V + V +
Sbjct: 242 GIGSLFFFFQPLVGSFFGWLLLHEELAASFWLGGALIVAGVAVAVRSE 289
>gi|212639320|ref|YP_002315840.1| drug/metabolite transporter (DMT) superfamily permease
[Anoxybacillus flavithermus WK1]
gi|212560800|gb|ACJ33855.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Anoxybacillus flavithermus WK1]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 17/297 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +WG T + Q + + L R + ++ ++ F
Sbjct: 7 ISLLFVAFVWGATFVVVQNAIAFLPPLMFNGVRFAIASVLLWAWVLIFERK-------PL 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + L + + F LL F + VI FL + LK+R +
Sbjct: 60 DRQLICAGSLLGIWLCLGYAFQTIGLLYTTSSKAGFITGLNVVIVPFLSFIILKQRPSFN 119
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS---------SEGFF 197
++ ++L L ++T + + + V A FA +
Sbjct: 120 AVVGSILATCGLYLLTASGDMSINKGDVFVFLCAIAFALHIVTTSIYATKFSPILLTTIQ 179
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ + Y+ + F LI + F I ++ + +
Sbjct: 180 VQTVSIICFICSYLFEDWSLIPLSTFFEFDVWLALLITALFATTIAFFIQTHFQQYTSPT 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V ++ P+ +++ + + G++++ M++ LP I K +
Sbjct: 240 RVALIFALEPVFAALTAYIWNDEYLQQAALFGAGLILLGMILSELPQHIWQRKKNAR 296
>gi|146297809|ref|YP_001192400.1| hypothetical protein Fjoh_0043 [Flavobacterium johnsoniae UW101]
gi|146152227|gb|ABQ03081.1| protein of unknown function DUF6, transmembrane [Flavobacterium
johnsoniae UW101]
Length = 296
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 94/295 (31%), Gaps = 3/295 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L + +WG T + + + ++ +R+L ++ + I +
Sbjct: 1 MRNDNLKSYLNLHLIVFIWGFTAILGALIT-IDADNLVWYRMLIAMIFLGGFIAFKKQSF 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ VG+L+ I +T F + + V
Sbjct: 60 QVPVKEFFKLIFVGLLIALHWIFFFKAIHVSNVSITLSIFSLGAFFASLLEPLFYGRKVL 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E L IIA L +IL + I L L+ I + S F
Sbjct: 120 WYEVFFGLVIIAGLGLILQVEIKYLTGVYYALAAIILGVLFTLMNGKLISDHEPSVITFY 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E Y ++ G + F + L LI + ++ F ++R T
Sbjct: 180 EFGAGVFFITIYFLFQGKFTADFFQMSLNNWVLLLILASICTAYAFTASVKVMQRLTPYT 239
Query: 259 VGIMEYTAPLLMIVSSVFILK--QPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V + P+ IV + FIL + + I I++I +++ + + K
Sbjct: 240 VMLTTNLEPVYGIVLAYFILGGKEKMSVEFYIGAVIIIITVILNGVFKHYQNKKE 294
>gi|324012491|gb|EGB81710.1| integral membrane protein DUF6 [Escherichia coli MS 60-1]
Length = 328
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 46 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 98
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 99 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 158
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 159 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 218
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 219 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 278
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 279 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 316
>gi|300782720|ref|YP_003763011.1| hypothetical protein AMED_0789 [Amycolatopsis mediterranei U32]
gi|299792234|gb|ADJ42609.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 301
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 76/277 (27%), Gaps = 5/277 (1%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + + + L S ++++ R+L + L + T +
Sbjct: 14 ALMWGSSFFWIKLGLGMFSPVQLVLARLLLGAAMLLVLCRLQRARLPRDRRTWGHLAVAA 73
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA- 151
+ L G ++ +V + S + +
Sbjct: 74 FFHNALPFLLFAIGETTVDSGITGVLNSTTPLWVLLAAPLMGTSSRMTGVRLAGLVAGLG 133
Query: 152 ---LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L+ L G A A A+ + K + S + + + +
Sbjct: 134 GILLIFAPWQASGLLSWGALGCLAAAASYGFAFVYEGKYLSDPSVSPYATSAGQMVLASG 193
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
V+ G + P L+ F + + ++ Y P+
Sbjct: 194 MLVLALPAGGFAPVHVSAGPLLAVLVLGIGSTGIAFALNYQLLASEGAVAASVVGYLLPV 253
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ L + + IV+ + + LP
Sbjct: 254 VSVLLGAVFLGEQLHLRVIAGMVIVLGGVALTRLPKR 290
>gi|298250162|ref|ZP_06973966.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297548166|gb|EFH82033.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 522
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 80/281 (28%), Gaps = 15/281 (5%)
Query: 31 FCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
F L+G ++ L ++ + +L LP I+Y N +
Sbjct: 12 FLNTFLYGTYYAVSKGSLGRIDPIVFTFFVMLALLPLALCIIIY--------SWHEINRE 63
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ V + + + AL T+F + ++ +F+++ L+
Sbjct: 64 VIKSGVLLGSCICIGLFTLSVALKYNSATSTAFFPSLNGFLAAICVWLFMRQPLHKATWF 123
Query: 150 AALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
A L+ L++ L+S G + + A + F +
Sbjct: 124 AGLVSACGALLLILNSPIGGLRGALIAFIGGLFCTFYVFLADHEQRGKAYLPLFGIQLLT 183
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
++ + + L L I TV +
Sbjct: 184 MAIWGNFIALLFGNWQDVHPLLPNDLWSVLYIAFGTTCLPTLITVRLQNYISPITVSFIY 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P+L + + L + + + ++V ++ +
Sbjct: 244 ILEPVLGAAFANYYLHEVLPLDGYLGGALIVAGALINTWGS 284
>gi|296330415|ref|ZP_06872895.1| hypothetical protein BSU6633_04904 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675962|ref|YP_003867634.1| putative drug/metabolite exporter [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152418|gb|EFG93287.1| hypothetical protein BSU6633_04904 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414206|gb|ADM39325.1| putative drug/metabolite exporter [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 315
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 90/294 (30%), Gaps = 11/294 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
M G V WG++ Q L VSV +++ R+L S + +
Sbjct: 3 TQKQRMYGFFMVIVGAAFWGLSGTVAQHLFETSNVSVEWLVTVRLLLSSLLLLMILSAGK 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++ + A+ ++VF + F+ ++ T + + ++ PV+ V
Sbjct: 63 NRRAVWEIWKDKKSAIQLIVFGIAGMLGVQYTFLASIGTGNAAVATLLQYLAPVMIVLFM 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGI--------PLLSLAIAVTWSAYCFARKT 187
V K I A +L + ++ + I ++ ++ A+ +
Sbjct: 123 LVTRKNSFQLADICALVLALGGTFLLLTNGSINNLTVSPLSVIWGLLSAAALAFYTLYSS 182
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + I + + + + F ++
Sbjct: 183 PLLKKWGSALVIGWGMLIGGIGMSFIHPPWDVDVQGWTISENVSVGFIVIFGTLLGFYMY 242
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+K ++ T P+ + SS+ L + ++ + V
Sbjct: 243 LTSLKYLFPQEASMLGCTEPVAAVASSILWLGVSFGLYQAAGAACILAMIFVLS 296
>gi|269119729|ref|YP_003307906.1| hypothetical protein Sterm_1107 [Sebaldella termitidis ATCC 33386]
gi|268613607|gb|ACZ07975.1| protein of unknown function DUF6 transmembrane [Sebaldella
termitidis ATCC 33386]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 99/303 (32%), Gaps = 10/303 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L V + +LWG++ +Q+L VSV V+S R+ + + VY
Sbjct: 1 MKNKKWPGILMVIISSVLWGVSGTVSQYLFNNASVSVSCVVSIRMFTAGIMLLIISVYKG 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ ++++S + + + + + ++ PVI +
Sbjct: 61 NKDKVTGIWKDKYSRFHIIIYSIFGMLGVQFTYFTTIAKSNAAIATLLQYLAPVIIIIYY 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ LK++++ + A L+ + ++ + +A ++ +
Sbjct: 121 LIRLKQKISLSETAALLMALSGTFLLLTNGNTESLIISKEAFFWGLASAFALAFYTIYVK 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ I + I ++ G F L L F F
Sbjct: 181 KLLKWPSSVIIGWSMVIGGFILGLFVPDWGAVRDFAHFDIFLSMLFIVILGTLIPFYFFI 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ ++ + PL +++S+ L + ++++ +V+ L +
Sbjct: 241 ESLRYINAKEASLLSCSEPLSALITSIIWLHVSFGIYQFAGAFLIILMIVMLTLTSENKP 300
Query: 309 GKN 311
K
Sbjct: 301 AKE 303
>gi|229108077|ref|ZP_04237702.1| Transporter, EamA [Bacillus cereus Rock1-15]
gi|228675352|gb|EEL30571.1| Transporter, EamA [Bacillus cereus Rock1-15]
Length = 316
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 100/306 (32%), Gaps = 23/306 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R L S +
Sbjct: 14 FIAAIVATFLWGSAIPFIKLSYAELGIQPQEVGEQILFAGYRFLLSGVMLVLFFKVLGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 129 LYKDDALNIRKIIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMMFGSIGLLCIGALQVGVMPFTFSLHALLMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLLGLACVAAGIIVVNRTPAKQK 308
Query: 309 GKNKTK 314
+ + +
Sbjct: 309 MEQEKQ 314
>gi|307261529|ref|ZP_07543198.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|306868812|gb|EFN00620.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 280
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 107/281 (38%), Gaps = 6/281 (2%)
Query: 33 AYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK---NPK 89
A L+G+ + L ++ + +R++ P + AI+ F + K NP
Sbjct: 3 ANFLFGLGYYFAILLRPLNGESMFGYRIVVLAPFILLAILLFKQTNKFQQLWQKIKQNPP 62
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V +L+ A + F++A Q S Y + P+++V LG + KE L+ +
Sbjct: 63 LVLVLLLLALNTGIQLWLFLWAPNNGQAIEVSIGYLLLPIVAVALGKIVFKEHFTLLKWL 122
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ ++ + +G + +A + L + F
Sbjct: 123 SLGFAVIGVAYNIWLTGSFSWATIVAGIGYPLYITLRRYFE--INTLATFFVELLLVMPF 180
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + N FL +GL+N F ++ ++ +G++ Y PL+
Sbjct: 181 AGYFIDQTDMQPILANNQHIYYFLALFGLVNGAAFILYIASSNLLPVNVLGLLGYVEPLV 240
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
M+ S I + +D+ ++ + +A+++ + + +
Sbjct: 241 MLCVSFMI-GEVLDSKSYLLMICLALAIILLTVDNFRLTRR 280
>gi|304392157|ref|ZP_07374099.1| putative ABC transporter, membrane spanning protein [Ahrensia sp.
R2A130]
gi|303296386|gb|EFL90744.1| putative ABC transporter, membrane spanning protein [Ahrensia sp.
R2A130]
Length = 305
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/278 (9%), Positives = 78/278 (28%), Gaps = 5/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + I+W + + + + V + RV+ + ++
Sbjct: 20 FLMMAVTAIVWASAFIAIKIAVVDTGPVWVATWRVVIGFAVLLPYALWRGFIWPAGPKVW 79
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF--VTPVISVFLGSVFLKERL 143
L + W + +F + ++ + ++ L
Sbjct: 80 VLLFITAAFNVVFPFLLISWAETTINAGLTSLLMGVGPFFALIATHLTTDDEKISWRKSL 139
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSL--AIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ A +L +L +T G +++ +A + + + +
Sbjct: 140 GCVIGFAGVLTVLGADALTGLGGAGVMAQLAVVAASICYTISGILIRRIDIPPVRLVTLI 199
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A + + G + + + + + + +KR + +
Sbjct: 200 FFAGMIMLVPLAFATVGPPPTGISSDAFWALIYLGIMPTALAQLLRVTIVKRVGYALFAL 259
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P++ ++ +L + I I +V+ + V
Sbjct: 260 ALNVIPVVGVIMGALVLGEVIGPATLIALVLVLAGLAV 297
>gi|299532845|ref|ZP_07046232.1| hypothetical membrane protein [Comamonas testosteroni S44]
gi|298719069|gb|EFI60039.1| hypothetical membrane protein [Comamonas testosteroni S44]
Length = 301
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 91/298 (30%), Gaps = 8/298 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ ++ + G L A L+ + T+F + + ++ + V +V
Sbjct: 9 TLSPSAQSAIRGVLLTIFACALFAVLDSATKFTGTLLPVLMVLWLRFTAQALVTSVLVLP 68
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GLS L+ + + + A + + + + + P+ V
Sbjct: 69 RHGLSALRTRNLSFQLLR-----AISGLLTTVCAFFCIKNMPLANFTAIWSAAPLFIVVA 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIPVG 191
++F KE+++ + ++ +L+++ + A+ + +
Sbjct: 124 SALFFKEQVSPARWSLLVIGLLAVIAIVRPENDGQPLGLAALWPVGLLVSGTTYQVLGSR 183
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S L L ++ G + + GL + +
Sbjct: 184 LSRLDSPPTTQLYSTWLPLLLTTPLIGFVWQPVDHWQIYAAAAVMGLCSGIGHLMLLQAY 243
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A +TV Y+ ++ Q D+ I +V ++ ++ + +
Sbjct: 244 THATPATVAPFLYSQIGFAMLMGWLFFGQLPDSTSLIGMTVVTLSGLMGVWLGIREKR 301
>gi|228996125|ref|ZP_04155777.1| Transporter, EamA [Bacillus mycoides Rock3-17]
gi|229003740|ref|ZP_04161552.1| Transporter, EamA [Bacillus mycoides Rock1-4]
gi|228757577|gb|EEM06810.1| Transporter, EamA [Bacillus mycoides Rock1-4]
gi|228763692|gb|EEM12587.1| Transporter, EamA [Bacillus mycoides Rock3-17]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 88/275 (32%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R L ++ + + + K + +L+
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWLIAIVCLLPIVWF-----KEKKLLPPRAAILPLLL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T + + F AL + + S+FLKE++N LQI++ +L
Sbjct: 71 MGVTGVVLFNIFQFLALEQTSATNVGLISTLNAISIALFSSLFLKEKINTLQILSMILSF 130
Query: 156 LSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ +A ++ + + + I
Sbjct: 131 FGVILVLSKGNIALLFSLHFNSGDLWMMAAVCIWGIYSVCSKWATKTTTPMMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVIILLPFNIPSFTVSNINASFITSLLYTGLISTVVCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ V+ ++
Sbjct: 251 PIFTAILAFLFLGEELTLIQIFGTITVITGCYLFS 285
>gi|253698678|ref|YP_003019867.1| hypothetical protein GM21_0022 [Geobacter sp. M21]
gi|251773528|gb|ACT16109.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M21]
Length = 291
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 84/289 (29%), Gaps = 17/289 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + ++W + ++ + + + R + +L + ++ + +
Sbjct: 3 YLLLTLSALIWSGNFVISRAMNNVIPPAGFVFWRWVVALVVLLPIVL----PRLRREWPI 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + + A+ + P+ + +F +R+
Sbjct: 59 VRANLPLIAVCGLFGVTLFNFLIYTAMHYTTAINAALVNSAIPIFILMFARIFYGQRVVL 118
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
Q + L ++ + + L G L+ LA ++ +
Sbjct: 119 RQHVGIALSLIGVAAIILRGDPSRILTLSFNHGDLLVLLAAIAWGLYSVAIKRYPQGLNP 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F M V + L + G+ L L + F +++G++
Sbjct: 179 FVFLFSMTVAGLLLLIPFYAFEIAQGQLMSLNQPTILSIAYVGILASVVAFTAWNHGLRE 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
G + P + +V L + + T ++ ++
Sbjct: 239 VGPHIGGQFVHLMPAFSTILAVIFLGERLQTFHVAGIVLISAGILCATY 287
>gi|153000061|ref|YP_001365742.1| hypothetical protein Shew185_1531 [Shewanella baltica OS185]
gi|217973979|ref|YP_002358730.1| hypothetical protein Sbal223_2820 [Shewanella baltica OS223]
gi|151364679|gb|ABS07679.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS185]
gi|217499114|gb|ACK47307.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS223]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 76/284 (26%), Gaps = 8/284 (2%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + +E +S R L + + Y L K+ +L
Sbjct: 13 IWGFGFVAQTLGMEHLSPFAFNGIRFLMGTFSLVPLVWYLRRQNKLHVSAPKDLVRGSLL 72
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+L F L F + V+ LG + LK + +
Sbjct: 73 --VGVLLFAGASFQQVGLQYTTAANAGFITGLYIVLVPVLG-LALKHTTGLNTWLGCAIA 129
Query: 155 ILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ L +++ G+ + + + A + M + +
Sbjct: 130 AVGLYFLSVKDGMSIGYGDALQLVGALFWALHILAVDHFAKRISPVVLAMMQFFVCGVLS 189
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
++ + + + + K A + I+ +
Sbjct: 190 LMVSAVIEVTTLDGVMAAWGSLFYAGLISVGIAYTLQVLAQKNAHPAHAAIILSLETVFA 249
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + L + + G++++ M++ +P K
Sbjct: 250 AIGGIIFLDESLSVRALFGCGLMLLGMLISQVPLRYLVKSRHQK 293
>gi|156717306|ref|NP_001096195.1| transmembrane protein 22 [Xenopus (Silurana) tropicalis]
gi|134024246|gb|AAI36065.1| tmem22 protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/306 (9%), Positives = 84/306 (27%), Gaps = 16/306 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSG 76
M LF + + G L T+ V LE+I R + + V Y
Sbjct: 100 QSRKMWAVLF--GSALAHGCVALITRLASDRSKVPSLELIFIRSVIQVLSVLMVCYY--K 155
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + +I + F I + + + +++ L
Sbjct: 156 EDPFGPSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTIMWRATTTVFSAILAFLLLD 215
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKT 187
+ + + L ++ ++ ++ + +
Sbjct: 216 EHMPYVDLVTVVGSVFGACLVMIPNIVNEQNSFLGVWKEAFGYTMTVMAGLTTALAMIIY 275
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + + F E + +LI L ++ F
Sbjct: 276 RSIKEKVSMWTALFTFGWTGSVWGACTMFVLQEPIIPLDGETWGYLIAICLCSTVAFLGV 335
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y + + + V +++ ++ +V + +L+ I +++I++ +
Sbjct: 336 YYALYKFHPALVSTVQHLEIVVAMVLQLLVLRMFPSVYDLIGGAVIIISVFALAGYKLYL 395
Query: 308 SGKNKT 313
+
Sbjct: 396 GRLGRQ 401
>gi|319945061|ref|ZP_08019323.1| drug/metabolite transporter family membrane protein [Lautropia
mirabilis ATCC 51599]
gi|319741631|gb|EFV94056.1| drug/metabolite transporter family membrane protein [Lautropia
mirabilis ATCC 51599]
Length = 305
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 85/289 (29%), Gaps = 16/289 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ +M L A ++WG T L T FL RVL + +
Sbjct: 5 NDTHQGSPIMVILATALAPLIWGSTYLVTTEFLPPGRPFTAALLRVLPAGLLLLA----- 59
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
++ + +L+ S +A+ + G L + ++ + L
Sbjct: 60 -----WTREWPRWRDMGWLLMLSILNIALFQAMLFVSAYRLPGGLAAILNSTQTLMVLVL 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKTIP 189
+++ + +A L +L ++++ +L I A
Sbjct: 115 TWWVGRKQPPIMAWASAALGVLGIVLLVYSPKAHFDTLGIIAALAGSASMATGIFFSARF 174
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
L + L + +L + + ++
Sbjct: 175 QHGLSVLAYTGWQLLLGGLCLLPVVLVLEPWPEHFTAANVGGYLYLCLVGAVLAYVLYFR 234
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
GI R + V + +P+ V L + + F +V+++++
Sbjct: 235 GISRLPPAIVSSLGPLSPVCAFVLGWVFLNEQLGGRALAGFVLVLLSII 283
>gi|262279739|ref|ZP_06057524.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260090|gb|EEY78823.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 292
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 96/276 (34%), Gaps = 8/276 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
L + + +L+ I + +F + V V+ R L ++
Sbjct: 10 KALLCLMTSALLFSIMGVCIRFASETVDNATVVFFRNAVGLFIFIPMLL-------KQGL 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ M + + + F YA+ + + +P+ + +FLKE++
Sbjct: 63 DFVKTDKLWMHTWRSLVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKI 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I AA++ ++ +L + L +L+ + + A + V + ++
Sbjct: 123 TKSMIFAAVIGLVGVLFVAKPDQGLLNALSFIGLGACFLSAMAFVTVRALTSTEPPERIV 182
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+F + + H+ + + LI GLL + SY A +G M
Sbjct: 183 FYFCIFGSLISSIPMFWHWRIFTWHELALLIAAGLLANISQLFMSYAYSLAPAGQIGPMN 242
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y A + + + D I I++ A+++
Sbjct: 243 YIAIIFAGIWGFVFWHELPDLFSLIGIFIILFAILL 278
>gi|255034976|ref|YP_003085597.1| hypothetical protein Dfer_1183 [Dyadobacter fermentans DSM 18053]
gi|254947732|gb|ACT92432.1| protein of unknown function DUF6 transmembrane [Dyadobacter
fermentans DSM 18053]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 80/299 (26%), Gaps = 8/299 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + WG T L + + L + R + + + +V +
Sbjct: 2 KSNLTAYIALLMVCFFWGTTYLAARIGVSGFPALFFMGFRNVVAGLLLLSFLVLKNRSFP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ G + + V W + F + + +
Sbjct: 62 WTLRDMLLQLVPGWCMITFGTGLVGWCVQFIPSGLAALLYATVPLFTIVINLLARKDERV 121
Query: 140 KERLNHLQIIAALLIILSLLIMTL-----HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ I+L S + + + G ++
Sbjct: 122 NAHVAAGMLMGLAGIMLVFRDNISYLADRASFVGICVTLASCVSWCIGGLYTKSYPGKTD 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEH--FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
FF + + + F+ + L + + + Y +
Sbjct: 182 SFFNAAIQMTAGGVGLFTLSAFNEDWTSLPVMQTKSLLALLYLIFFGSILAYASYLYAMS 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
R V I Y PL+ ++ F+L + + + + F + + + + + KN
Sbjct: 242 RLPAGLVSIYAYINPLVALILGFFVLDEQVTWLTVLAFVVTLGGVFLVNKGYQLQKRKN 300
>gi|118476164|ref|YP_893315.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|118415389|gb|ABK83808.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis str. Al Hakam]
Length = 316
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 23/298 (7%)
Query: 29 FVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGGLS 79
A LWG + + + EV +R S + F ++
Sbjct: 16 AAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKLLGKDMN 75
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV-F 138
K T K ++ + + F + G + + + L +
Sbjct: 76 FKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQIILAHFLY 130
Query: 139 LKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ LN +II + +++ ++ H GI L L A +Y
Sbjct: 131 KDDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAMLYSYGNILAKEGS 190
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 191 KTLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWNTI 250
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 251 MKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|332995547|gb|AEF05602.1| putative transmembrane protein [Alteromonas sp. SN2]
Length = 296
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 95/298 (31%), Gaps = 15/298 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +WG + ++ + + + +++ R + + + ++ G +
Sbjct: 6 IAALLLLASIWGGSFIFMRVAAPEFGIYVLVAIRTVLATSVLLPILMMTGGVSQIF---- 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + AV + F Y+ L + + + P+ + ++L ++L
Sbjct: 62 --KHWFPIALVGLANTAVPFVLFNYSSLHLEAGVNAILNATAPMFGALVAWLWLGDKLTP 119
Query: 146 LQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
I L L + +++ S +P+L+ +A T + + +
Sbjct: 120 TAIAGLALGFLGVTVISQQKLGEGDISFVPILTALLATTCYGIAASMMKRWLQGVRPLVV 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
A+ ++ + S + L + + ++ I +
Sbjct: 180 ATGSQAMASIMLAPF-ALSTLPATMPSANAWLNAVALAILGTAIAYILYFKLIANVGPAK 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y PL I+ V L++ + I +++ + + I K +
Sbjct: 239 AISVAYMVPLFGIIWGVLFLQEHLSLQTIIGGVMILTGVALTTGVIGIIKRSRAAKTA 296
>gi|329116427|ref|ZP_08245144.1| membrane protein [Streptococcus parauberis NCFD 2020]
gi|326906832|gb|EGE53746.1| membrane protein [Streptococcus parauberis NCFD 2020]
Length = 300
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 99/299 (33%), Gaps = 21/299 (7%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
N ++G+L IL+G++ L+T+ Q S L ++ R L + + V
Sbjct: 2 TNNTKKDLIIGSLCAIGCEILFGLSYLFTKEAGQTASALALLGWRFLVAALFLLILFVI- 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L++ K +L+ + +++ + + PV+++
Sbjct: 61 ----GLIRVNFKGKSIKYVLLAAIFSPVLYFLGETLGINLTTASESGAFLASIPVMALIA 116
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW------SAYCFARKTI 188
++ LKE+ + QI+ + + +L+ + G+ + S +
Sbjct: 117 ATLILKEKPSKHQIVGIAITVSGVLLSVMAVGMSASFSVLGYAMLFLAVLSYALYCVYVD 176
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL---------IGYGLL 239
G + + ++ + L + H L + F
Sbjct: 177 KASHFTGVELTVVMILLGFLVFASLAIGEAIVHQNLSQLIILPFENNTFALAILYQGIGC 236
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ F + + I + ++ + + IV V IL + ++ ++I +
Sbjct: 237 SVLAFFLSNVAIAKIGVNRTASFIGVSTAVAIVFGVLILGESFTGLQIFGVLAIMIGVY 295
Score = 36.4 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 35/101 (34%)
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A +++ G L+ F + GI S G
Sbjct: 45 WRFLVAALFLLILFVIGLIRVNFKGKSIKYVLLAAIFSPVLYFLGETLGINLTTASESGA 104
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ P++ ++++ ILK+ + + I V +++ ++
Sbjct: 105 FLASIPVMALIAATLILKEKPSKHQIVGIAITVSGVLLSVM 145
>gi|313888635|ref|ZP_07822300.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845364|gb|EFR32760.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 305
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 96/301 (31%), Gaps = 7/301 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++ +F I+WG+ + +E + L + R ++ ++ +F +
Sbjct: 2 KRELKASIMLFATAIIWGLAFVAQAAGMEHLGPLSFTASRCFVAVVFLYLTYKFFMMKSA 61
Query: 80 LLKDTLKNPKAVGML-VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + K + + + +L+ SF + V +G +F
Sbjct: 62 SYREEKFDMKRTLVGGSICGLVFTIAINLQQVSLIYTTAAKASFLTALYIVFIPVIG-LF 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--- 195
R + I+ L ++ ++++ G+ + + V SA FA + +
Sbjct: 121 FGRRPSVKIILCIFLAMVGTYLLSIKGGLKINRGDLIVILSALVFAIHILLLTKYSTNTN 180
Query: 196 -FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + A+ + + L L + F I +K
Sbjct: 181 AVLVSLVQFAVCGVISLAGALVLEDISMEAILKSQVTILYVGILSSGVGFTIQLMALKDL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ + + IL Q + I+ +A + +P K +
Sbjct: 241 EPVVASMICSLESVFGALFGWLILSQEMTEREIFGAIIIFLATIFAQVPIEAYLEKRLER 300
Query: 315 K 315
K
Sbjct: 301 K 301
>gi|283779777|ref|YP_003370532.1| hypothetical protein Psta_1998 [Pirellula staleyi DSM 6068]
gi|283438230|gb|ADB16672.1| protein of unknown function DUF6 transmembrane [Pirellula staleyi
DSM 6068]
Length = 294
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 81/291 (27%), Gaps = 15/291 (5%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A WG L ++ + +R L + + L
Sbjct: 1 MLALATFFWGSNYLVGTIAIQYTPAFTLTYYRWLLACVPLMVLA----QVLERPDWRAVW 56
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + ++V+ +L+ + V P + V S FL+ERL +
Sbjct: 57 RNLPLLAALAICGISVYSSLMYLSLVYTTPMNAALINAVNPSLIVLAASFFLRERLTPIG 116
Query: 148 IIAALLIILSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
I+ L ++ + ++ H + + + +
Sbjct: 117 IVGIALGLVGVAVVLTHGNLMAILHHRYNVGDLMMLGCVCFWTVYTLIARRLHGVRPITS 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + + L T + + +++ + R S
Sbjct: 177 TAVQSVLAVISLTPFALYFDNYTLSLEPTAITCIVYVVLGPTIASYLLWNIALTRIPASQ 236
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ + S +L +P+ + +V+ +++ +
Sbjct: 237 GAVFMNLIPIYAAILS-TMLGKPVTMAQICGGLLVIAGVLLSSQSSHRVEK 286
>gi|261868192|ref|YP_003256114.1| RhaT protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413524|gb|ACX82895.1| RhaT protein [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 296
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 104/299 (34%), Gaps = 14/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L +F + ++++ LE + + I R ++L + F + F +
Sbjct: 1 MKKYTGELLLFIVTFIAASGWFFSKYSLEGMPTMGFIGLR--FTLACLIFLPLSFKAIIK 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +VG+ +L + + + +F Y + +I+ + +
Sbjct: 59 LTTSQKLKAASVGLAYIVNMVLWITGL-----IYSEDLGEGAFLYSLAMLIAPVISWILF 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
+ + ++ L I L +++ G L +A +A F +
Sbjct: 114 QYQPKYVFWFCLPLAISGLYLLSNEDGKGLHLSYGNILFLLASCSAALYFVLNNQFSKNI 173
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L + + ++ +F + F+ + + + + K
Sbjct: 174 PTLSLTTIQLGVISFLAGSYSLIFEKWYFPIPENTWFWFVGSTLIATNLRVFLQTVAQKH 233
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ I+ + +V S IL + + + + +++ A++VY P ++ NK
Sbjct: 234 CDINNAAIIMLLELIWTMVFSTIILNESMSRQKMLGCILILSALIVYCFPGMLKRRTNK 292
>gi|228986137|ref|ZP_04146280.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228773652|gb|EEM22075.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 90/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|229083715|ref|ZP_04216036.1| Transporter, EamA [Bacillus cereus Rock3-44]
gi|228699573|gb|EEL52237.1| Transporter, EamA [Bacillus cereus Rock3-44]
Length = 316
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 97/292 (33%), Gaps = 23/292 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FVAALAATFLWGSAFPFIKLSYAELGIRPHEVGEQILFAGYRFFLSGVMLLFFFKAIGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K ++ + + F + G + + + L
Sbjct: 74 MSFKKGTGKQ-----LIQIGVFQTFLQYVCFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN ++I + +++ + H GI L L A +Y
Sbjct: 129 LYKDDALNIRKVIGVSIGFCGVILVNVPSDGSLAFHFGIGELLLLGAAMMYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + F G F+ ++ L L+ L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSIGLLCIGIFQVGFIPFVFSMKALLMLLYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TVMKYNKVGKVSMYMFFIPVFGVMLSSLILGEAIHSFVLFGLACVAAGIIVV 300
>gi|30019743|ref|NP_831374.1| drug/metabolite exporter family protein [Bacillus cereus ATCC
14579]
gi|228957972|ref|ZP_04119709.1| Transporter, EamA [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229127022|ref|ZP_04256021.1| Transporter, EamA [Bacillus cereus BDRD-Cer4]
gi|29895288|gb|AAP08575.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
gi|228656375|gb|EEL12214.1| Transporter, EamA [Bacillus cereus BDRD-Cer4]
gi|228801679|gb|EEM48559.1| Transporter, EamA [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQELKHSSL----AGLMVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIP 189
K++ I+ + L ++T L I A F++K P
Sbjct: 120 KQKATIFIILGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|84515199|ref|ZP_01002562.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
gi|84511358|gb|EAQ07812.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
Length = 300
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 93/293 (31%), Gaps = 7/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + + + + + L + + + + R ++++ +
Sbjct: 5 SDNIRGALLMVGGMCAFTVNDAFMKSLSGDIPLFQAVLLRGIFAIICLTIMCRVMDQ--- 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ G+++ FF+ AL S P+ ++FL
Sbjct: 62 --LHFNLPRRDWGLIMLRTLGEVGGTYFFLTALFHMPIANVSAILQALPLAVSLAATLFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E L + A + + ++++ G S +I + C + + V
Sbjct: 120 GEALGWRRFAAIAIGFVGVVLIIQPGGTDFSSYSIYALIAVACITLRDLAVRRMSVQVPV 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG-YGLLNSFVFCIFSYGIKRAKLST 258
+ V I A+ + + IG + F + ++ ++S
Sbjct: 180 VFVALIAAIGVTALGAIGSLFITWQPMSATSAMQIGSATICLIFGYIFSVSAMRSGEISF 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V YT+ L+ ++ + + + + + + IVV + L ++
Sbjct: 240 VAPFRYTSLLVALILGMAVFDEWPNVLTVLGASIVVATGLFTLWRERRLRIRH 292
>gi|224824031|ref|ZP_03697139.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
gi|224603450|gb|EEG09625.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
Length = 309
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 86/290 (29%), Gaps = 16/290 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + A I + ++ + + S ++ R+ + F ++
Sbjct: 20 KGMILAALAAIGFSAKAIFVKMGYRYGASAEALLVLRM---AFALPFFLLLALQSTQADV 76
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D L ++V + L L + ++ P + +F+ ++L +R
Sbjct: 77 DQLTWRDWRQLVVLGLLGYYLSSWLDFVGLRFVSAALERLTLYLYPTLVLFISVLWLGKR 136
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPL-----------LSLAIAVTWSAYCFARKTIPVG 191
+L L +++ + LA AV+++ Y
Sbjct: 137 YPAKVWWGVVLAYLGVVLAFVQDLRDAELIHQALFGLSWVLASAVSFALYLVGSGEAIAR 196
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + L ++ + L + L + + I
Sbjct: 197 FGATRFTALATLVACIAVFIHFAVTMPLAALQLPAPVYLIGLAMGVFSTALPLLCMNMAI 256
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ + P+L + +L + + ++ + G+V+ + +
Sbjct: 257 RQLGAGKAASVGTLGPVLTMALGWLVLGENLSVLQIVGAGLVISGVGLVS 306
>gi|90418688|ref|ZP_01226599.1| possible integral membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336768|gb|EAS50473.1| possible integral membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 310
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 95/296 (32%), Gaps = 8/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + L+ + ++L SV +V+ R + +L + +
Sbjct: 17 STNTLGMGIMLFGIFLFMVNDTLGKWLVSTYSVGQVLLIRSVAALIILAPFLA------R 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + GM V V F A+ T + P+ L +FL
Sbjct: 71 TGLKPLVSLERPGMQVLRVIFATVEVLAFYGAVAYLPLADTMAYWLAAPIYVAALSPIFL 130
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KER+ + A ++ + +L++ S L + A + FA I S G +
Sbjct: 131 KERVGIRRWTAIVIGFIGVLVVLQPSQASLTAPAFIAIGGSLTFALMMITARSLRG-TSD 189
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ + +V + + D L G++ + K + +
Sbjct: 190 KALVFWQTVGALVGGAILAPFGWVTPDPLDLGLLAILGVVAMAAHMCVTRAFKLGDAADI 249
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
++YT + I+ + I++ A + + + + +
Sbjct: 250 APLQYTMLVWAILFGYLVFGDVPRLTMLFGAAIIMGAGLFIFFRERQLARRVSSAQ 305
>gi|311106573|ref|YP_003979426.1| hypothetical protein AXYL_03391 [Achromobacter xylosoxidans A8]
gi|310761262|gb|ADP16711.1| hypothetical protein AXYL_03391 [Achromobacter xylosoxidans A8]
Length = 319
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/316 (14%), Positives = 88/316 (27%), Gaps = 14/316 (4%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWS 63
T ++ + S AS MMG L + + +++ V +L + R
Sbjct: 2 TPADHGRTRSTAPASGGPMMGVLLLVLSMWTLSCLDASGKWVMNAGVPLLVLSWFRYAVH 61
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
L V ++ G + + + F L +
Sbjct: 62 LALVLALVLPARGLGVFRSKKPREQILR------GGSMFLATLMFFTTLSYIPQAEATAI 115
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF 183
F+ P++ + LKE + +AA + + ++I+ G + +A CF
Sbjct: 116 NFLAPLLVLSAAPWVLKEPARLSRFVAAGIAFIGVIIVIRPGGGLDPVGTVFGLLTACCF 175
Query: 184 ARKTIPVG------SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
A + I V I + + D + LI G
Sbjct: 176 AVQFIATRRVAGDDPFTSLIWSGAVGTICLTLALPFILPPALPILKALAPLDWVVLISTG 235
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ +RA ST+ Y + + D + + I+ +
Sbjct: 236 ITGGLGHLFQIAAYRRAPASTLAPFVYLQIISATSVGWLVWGHFPDPLTWLGIAIICASG 295
Query: 298 VVYLLPTVINSGKNKT 313
+ L S
Sbjct: 296 IGIGLIEWRRSRAQAA 311
>gi|237748389|ref|ZP_04578869.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379751|gb|EEO29842.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 318
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 95/298 (31%), Gaps = 17/298 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +WG+ + + ++ + I R + V + + L + L
Sbjct: 13 VLMLLLCTIWGLQQIALKAAAPDMAPILQIGLRSGVAAILVGLFLRFKGLSLLPERSALP 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G L +LA T ++ Y ++ L +ERLN +
Sbjct: 73 AGVLAGALFSLEYLLAGEGLRH-----TSAAHMSVMLYTAPVFAALGLHFRIPEERLNPI 127
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFARKTIPVGSSEG 195
Q L+ ++IM S+ A++W A +T +
Sbjct: 128 QWSGILVAFGGVVIMFYDPASAGPSVNDMIWGDFLGLLAAMSWGATTVVIRTSKLADVPS 187
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
M L + + G F I ++ F F ++ + ++
Sbjct: 188 AQTVMIQLICAVVILLTACVLFGNTSFNPTEILWVSLGYQTVIVCFFSFLVWFWLLRVYL 247
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S +G++ + P+ ++ V +L + +D + +V+ ++ NK
Sbjct: 248 ASRLGVLSFLTPVFGVIFGVLLLNETVDVRFIAGALCTLSGIVLVSAWDMVKRFFNKK 305
>gi|237748335|ref|ZP_04578815.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379697|gb|EEO29788.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 312
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 92/298 (30%), Gaps = 21/298 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G +F A +WGI + + VS + + R+L + + A +
Sbjct: 1 MKPEKLTGHAAMFGANAMWGIMSPVAKMVMAAGVVSPIVMTDFRILGAAILFWIASFFTK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + S + + G FI+ + S P++++ +
Sbjct: 61 R------EPVSWKDLGLFFLASQIAIVFNQGSFIFGVSMTSPIDASIITTSLPILTLIIA 114
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCF 183
+ +LKE + +I + +++ + G L A F
Sbjct: 115 AFYLKEPVTGKKITGIVFGATGAILLVMSGQQLANGNASNIRGDLLCLTAQLCFSIYLVF 174
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
R I S M + ++ ++ + +
Sbjct: 175 FRGLINRYSPITIMKWMFTGSTLSVLPFTYDKILAIDWAAVEWRTLAGIAFVVVGGTFIS 234
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + S G KR + + V + Y P+ + ++ ++TI ++ + +
Sbjct: 235 YLLISIGQKRLRPTVVSMYNYIQPIAAAIVAILWGMDSFTLLKTIAVILIFSGVYLVT 292
Score = 36.4 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 41/133 (30%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+ A + + + I M I + W + + L
Sbjct: 12 MFGANAMWGIMSPVAKMVMAAGVVSPIVMTDFRILGAAILFWIASFFTKREPVSWKDLGL 71
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
F + + F F +G+ I+ + P+L ++ + F LK+P+ +
Sbjct: 72 FFLASQIAIVFNQGSFIFGVSMTSPIDASIITTSLPILTLIIAAFYLKEPVTGKKITGIV 131
Query: 292 IVVIAMVVYLLPT 304
++ ++
Sbjct: 132 FGATGAILLVMSG 144
>gi|229005489|ref|ZP_04163202.1| hypothetical protein bmyco0002_24260 [Bacillus mycoides Rock1-4]
gi|228755851|gb|EEM05183.1| hypothetical protein bmyco0002_24260 [Bacillus mycoides Rock1-4]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 90/281 (32%), Gaps = 13/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L + +IS R + +
Sbjct: 9 LMLLLVTFFWGASILLTKIGLNYMQEYNLISLRFIIAFLLSGIVFY--------KHLIKI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + A IL + + F + F +T + L S+FLK+R
Sbjct: 61 DFRTIKYAFILAVILFIVYIFATFGTKYTSVSNAGFLMSLTVIFIPVLSSIFLKQRPEKK 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ +L I+ + ++TL+S G + + + A + +
Sbjct: 121 VILGVVLTIVGIGLLTLNSQLKIGYGDILCILCALFYAVHIIITGTITKQVNSISLGVLQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L LF +++ F L+ + F + + + G++
Sbjct: 181 LGFVGLFSSIFSMFMENPKLPSTVESWFSILVLSIFCTAMAFIVQIIAQQYTSPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++V+ L
Sbjct: 241 FSLEPVFSAGFAFVFTGETLTAKGYLGATLILLSVVIAELD 281
>gi|218902042|ref|YP_002449876.1| transporter, EamA family [Bacillus cereus AH820]
gi|218535797|gb|ACK88195.1| transporter, EamA family [Bacillus cereus AH820]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ LL
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMLLSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFTLLFSLXFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 285
>gi|209524937|ref|ZP_03273482.1| protein of unknown function DUF6 transmembrane [Arthrospira maxima
CS-328]
gi|209494586|gb|EDZ94896.1| protein of unknown function DUF6 transmembrane [Arthrospira maxima
CS-328]
Length = 574
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/323 (10%), Positives = 96/323 (29%), Gaps = 37/323 (11%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISH----------------------RVLWS 63
G + ++ + + + L + + R++
Sbjct: 251 GLFLALMSALVLSLFNVCLRILLKTPDTPKVMFGLFEIDGVITPGLGNSLLILLLRMVVV 310
Query: 64 LPGV-FFAIVYFSGGLSLLKDTLKNPK--AVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ + F A + + ++ L + + ++ S L + A+ +
Sbjct: 311 MLLMPFLATFLYPAVWTDIRRFLNSGDSKLIVTVIGSGFFLFLSQVCIYIAIGEIPTGIA 370
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT--LHSGIPLLSLA----- 173
+FV P+I+V +R ++I A I++ ++ G +
Sbjct: 371 ITIFFVYPIITVLASWGLFGDRPTLIRIGAMFTILIGGILSLPNFFGGAAGNTEIGVLAA 430
Query: 174 -----IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ + +L + G E P
Sbjct: 431 LGAGIAFAGYVLLTQIAAGKLHPIPFSLVNFASIFVFCSLSLMFLPDNLGLEVNPDLWNP 490
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ G+L + + ++ I+ A + I+ + P L + + I+ + + +
Sbjct: 491 IIIGGAILGVLTLLSYLLNNFAIRSAGAALASIIGTSGPALTALLAFLIIGEALSLKQIS 550
Query: 289 VFGIVVIAMVVYLLPTVINSGKN 311
G+V+I + + ++ + +
Sbjct: 551 GMGLVIIGVGSMSVERMLVAKRK 573
>gi|152987430|ref|YP_001347037.1| hypothetical protein PSPA7_1653 [Pseudomonas aeruginosa PA7]
gi|150962588|gb|ABR84613.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 311
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 60/293 (20%), Positives = 110/293 (37%), Gaps = 4/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---LSLL 81
G L A +L+ P Y LE + L+V++HRVLWS+P V +V +
Sbjct: 18 QGVLLSLAASLLFVTLPGYVHLLEPLDSLQVLAHRVLWSIPMVLLLVVATRQWPTLRAAW 77
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + +A ++ + WG FI+A L + S YF+ P+ V +G VF E
Sbjct: 78 RRLFAEPWLLACFPLTAAMMLLQWGIFIWAPLAGKTLELSLGYFLLPLAMVLVGRVFYGE 137
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL LQ IA + +L +++ + +G
Sbjct: 138 RLTPLQGIAVACALAGVLHEFW-LTRAFSWVSLVTALGYPPYFMLRRKMGVDALSGFVFE 196
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L + + F L L GL+++ F + + GI
Sbjct: 197 MLFLLPVALFALYWLGDESQAFREAPRLWLLLPMLGLISALAFGAMMASSRLLPMGLFGI 256
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L+ + +V L + + + + +A+++ + K +
Sbjct: 257 LSYVEPVLLFLVAVLFLGEAFRVEQLWTYAPIWLAVLLTGWDSARLLRKQARR 309
>gi|73662931|ref|YP_301712.1| permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
gi|72495446|dbj|BAE18767.1| putative permease [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 303
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 106/297 (35%), Gaps = 14/297 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G + + LWG++ Q+L +S ++ + R+L + + + +
Sbjct: 3 QQNQHIGYIMIISGATLWGLSGPMIQWLFQHSSISSIDFLVFRLLLAGIFLLLYLSFSKK 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + +++F A + FFI + F +P++ S
Sbjct: 63 QIFEIWKYPGHRF--QLILFGAIGMLGAQYFFIETINVSNAVTAMLFQFFSPILITIYVS 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKT 187
+ +K+ Q I+ ++ ++ L + + + L + ++ Y +
Sbjct: 121 IQIKQLPTARQFISIVIALIGLYFLITNGSYQNILLTKQGIIFGLLTMLGFTFYTIQPVS 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + +L +++ S I T+ L+G + + F ++
Sbjct: 181 LIKKWGVILVVGWGMLIAGVFSFLLNLNLSIQSFIEGLTITTTVMLLGVIISGTLSFLLY 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+K S I+ PL+ I+ S+ L + + + ++IA+V P
Sbjct: 241 IGSLKYLSPSETSILSSIEPLVAIIISITWLNESFGYYQLVGGLFIIIAVVALTTPK 297
>gi|239503891|ref|ZP_04663201.1| hypothetical protein AbauAB_16391 [Acinetobacter baumannii AB900]
Length = 295
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLLK----DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + A + I ++ + I + + ++F
Sbjct: 62 KIAFISSTPSKLSVFAQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + ++ LL + + I++ L+ + ++ + Y +
Sbjct: 122 GRFILKESIYIHSLVGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 182 NGGLFLTKYLLLFGGVYLAVPFLVNLHSITFNSDIILGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 288
>gi|225387859|ref|ZP_03757623.1| hypothetical protein CLOSTASPAR_01629 [Clostridium asparagiforme
DSM 15981]
gi|225046042|gb|EEG56288.1| hypothetical protein CLOSTASPAR_01629 [Clostridium asparagiforme
DSM 15981]
Length = 306
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 93/294 (31%), Gaps = 10/294 (3%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + ++ ++ ++ Q + ++R+LW++ + + L +
Sbjct: 11 MIVVGILGVSLSAIFVKY-SQAPSVVTAAYRLLWTVALMLPMVFGSRNFRRELAAADRRT 69
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ S LA+H+ + +L ++ + L R+ +
Sbjct: 70 VV--LCAVSGIFLALHFTAWFESLNQTSVASSTAIVCTEVIWVAVGFLAVLGGRIPKMAA 127
Query: 149 IAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + + L++ L G L A+A+ + + I G +
Sbjct: 128 ASIAVTVAGSLMIALSDYSAGGNHLWGDALALAAAMFSAVYTLIGRQVRRGMSTTVYTFI 187
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLI---GYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + G + L + ++ IFS+ +K S V
Sbjct: 188 VYVFCALSLCGATFFSGQSLTGHGMSSVMVGLLLAVFSTLLGHSIFSWCLKYFSPSFVSA 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ P+ + +V + + ++ + V +++Y +G+ K
Sbjct: 248 SKLCEPVAASLFAVLLFGEIPAGLQVAGGLVTVGGVLLYSRVESGEAGRRAAGK 301
>gi|218264150|ref|ZP_03478042.1| hypothetical protein PRABACTJOHN_03732 [Parabacteroides johnsonii
DSM 18315]
gi|218222268|gb|EEC94918.1| hypothetical protein PRABACTJOHN_03732 [Parabacteroides johnsonii
DSM 18315]
Length = 298
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 82/299 (27%), Gaps = 21/299 (7%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G + + A IL+G++ ++L + R ++ + + G +
Sbjct: 1 MKGHVLILTANILFGVSMPVFKYLLTSDFPPEAITYMRAAFACAMFWIVSFFVVPGERVP 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ V + + F+ L + S P+ + L +V LKE
Sbjct: 61 P-----KDLGLLAVCGLCGVGFNQWLFVTGLRSSSPVDASIIATAVPIFVLLLAAVVLKE 115
Query: 142 RLNHL--------QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ LL+ S+ M S + L + + + P+
Sbjct: 116 PITAKKSAGVLLGVGGGLLLVYSSVHAMDGESSLKGDMLMLLNQMLYSVYLVLSKPLSLH 175
Query: 194 EGFFIEMCVLAIP------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
M + + + L F +
Sbjct: 176 YSPVTVMKWMFLFSALALTPFCLRHLQEVPVFHRETFDGMELCALLYLLTGATFLSFLLI 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+K + +TV + Y P++ +V I + + +V + +
Sbjct: 236 PMALKYIRPTTVSMYNYVQPIVASGIAVSIGQDTFSLQKLTAAALVFAGVWLVTKSKKR 294
>gi|166031942|ref|ZP_02234771.1| hypothetical protein DORFOR_01643 [Dorea formicigenerans ATCC
27755]
gi|166028395|gb|EDR47152.1| hypothetical protein DORFOR_01643 [Dorea formicigenerans ATCC
27755]
Length = 290
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 96/288 (33%), Gaps = 11/288 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G +FV + G+ P + + L+ + + ++ + + LK
Sbjct: 4 GFIFVALSATCLGVMPSFQKQVLLDGLPMNSLMFYVNWIITLVCLVMALVKKRSFRALKI 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
V L+ L + + L F+ P I + + KE
Sbjct: 64 Q-----IVQSLLMGVFGLLITALLLNNSYLYLPVGTAIMLNFLYPSIVCIVMGIVFKEGF 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----GFFIE 199
+ QI A ++ ++ + +T G + + SA+ + I ++
Sbjct: 119 SKYQIAAIVVSVIGMGFLTGAGGNMPMIGIVLAVASAFVYGGYLIANEKGPANELPIEVK 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +++P + G D F+I GL N+ + YGI + +
Sbjct: 179 LFYVSLPGTILYCFIAPMTGTLVAPPKSIDVAFIIAVGLFNAGGYFFMMYGISKLGAAIA 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ P++ ++ S P+ + G+V+ ++++ +
Sbjct: 239 SFVSMLEPIVSVIFSTLWFHDPVTIGIVVGGGLVMASILLIAIDGAKK 286
>gi|46191306|ref|ZP_00120484.2| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Bifidobacterium longum DJO10A]
gi|189439185|ref|YP_001954266.1| putative permease of the drug/metabolite transporter
[Bifidobacterium longum DJO10A]
gi|189427620|gb|ACD97768.1| Putative permease of the drug/metabolite transporter
[Bifidobacterium longum DJO10A]
Length = 311
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 83/290 (28%), Gaps = 16/290 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + LWG + L +F +E + ++ R++ + +
Sbjct: 25 LMLLGCAALWGGSYLLAKFAMEAIPPQWLMGLRMIGACLCMLAL-------FHKHIVPYL 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
PK + + L T + ++F V++ F + K R +
Sbjct: 78 TPKIIVPALVVGLTYWGTMVTQTIGLQTIEPGRSAFLTAAYCVLTPFATWIISKNRPKAI 137
Query: 147 QIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++A ++ ++ + ++L +G L +
Sbjct: 138 NLVAGVICLIGVGFVSLEPGGSLSLSAGDWLTIATAVIFSFNLTCLGVYTKRFDPIAVTF 197
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+A +L L + + + G+ S
Sbjct: 198 VQFGVAGVLFIIGALFTEPMPNASWLAPSVVASVLYLFLGATMSAQIMQNIGLAHVPASQ 257
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ T L + S + I + F ++ +A+++ ++ S
Sbjct: 258 ASIIMCTESLFAVTFSALFWGETIMWSSLVGFALIFVAVLMSVIKPTKQS 307
>gi|237742372|ref|ZP_04572853.1| membrane protein [Fusobacterium sp. 4_1_13]
gi|256845700|ref|ZP_05551158.1| membrane protein [Fusobacterium sp. 3_1_36A2]
gi|294785053|ref|ZP_06750341.1| membrane protein [Fusobacterium sp. 3_1_27]
gi|229430020|gb|EEO40232.1| membrane protein [Fusobacterium sp. 4_1_13]
gi|256719259|gb|EEU32814.1| membrane protein [Fusobacterium sp. 3_1_36A2]
gi|294486767|gb|EFG34129.1| membrane protein [Fusobacterium sp. 3_1_27]
Length = 291
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 100/279 (35%), Gaps = 13/279 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F A W + T+ L++V V + R ++ V F ++ L LKD
Sbjct: 15 CAFIAIFFWATAFVLTKVVLKEVDVTTLGVLRYFFASIIVIFILIKQKISLPKLKDIPA- 73
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + A + FF A L S + P I+ + E++ +
Sbjct: 74 -----FVFAGFSGYAGYIVFFNMATLLSSPSTLSVINALAPAITAIVAYFIFNEKIKIIG 128
Query: 148 IIAALLIILSLLIMTLHSG-----IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ + +LI+TL +G ++ + I + + F + M
Sbjct: 129 WISMGISFCGILILTLWNGTLTVNKGVIYMLIGCVLLSLYNISQRYLTKKYSSFDVSMYS 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST-VGI 261
+ I + VV++ S F + L + + + ++ + AK +T V
Sbjct: 189 MLIGGILLVVYSPSSVRNIFSISFNSLILIIYMSVFPSIISYFFWTKAFEIAKHTTEVTS 248
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P+L + + IL I ++++ M+++
Sbjct: 249 FMFVTPVLATLMGIIILGDIPKLSTLIGGVVIILGMIIF 287
>gi|229056597|ref|ZP_04196004.1| Transporter, EamA [Bacillus cereus AH603]
gi|228720810|gb|EEL72367.1| Transporter, EamA [Bacillus cereus AH603]
Length = 320
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 91/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPLVWF-----KEKKIIPPRAAIIPLVI 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 88 MGITGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL + ++ + + + I
Sbjct: 148 FGVMLVLLKGNFALLFSLHFNSGDLWMMTAVCIWGIYSVSSKWATKTVTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + + T L + ++ G+++ +T G+
Sbjct: 208 GVILLLPFNIGSFTVSNINSSFITSLLYTGLVSTVLCMVFWNIGVQKLGATTSGVFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + + IVV ++
Sbjct: 268 PIFTAILAFIFLGEELTWTQIFGTIIVVTGCYLFS 302
>gi|114704996|ref|ZP_01437904.1| hypothetical protein FP2506_08666 [Fulvimarina pelagi HTCC2506]
gi|114539781|gb|EAU42901.1| hypothetical protein FP2506_08666 [Fulvimarina pelagi HTCC2506]
Length = 311
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 87/291 (29%), Gaps = 8/291 (2%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFA 70
GL + + AY+ + ++L + L++ R
Sbjct: 3 GLVSNANEDRAALAIGMMLLAYLGFSGIDTSAKWLGLVGLPALQIAFMRYFTHFVISTAL 62
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
I + + G+++ A LA A+ LT+ F +P+I
Sbjct: 63 IA-----KDGIGMDRFRSERTGLVLIRAGFLAGSTCANFVAVRYLPLTLTATIMFSSPII 117
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L L ER+ + A ++ L +LI A+C A T+
Sbjct: 118 ICALSGPILGERVGPWRWAAIIVGFLGVLIAIRPFDAEFHWAVFLSLAGAFCVALYTLLT 177
Query: 191 GSSEG-FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G E + V F+ T+ L+ G F + +
Sbjct: 178 RKLAGSVHHETMQFYSGVVGTVCLAPFAFLFWEMPQTWLATVLLVAIGGFGWFGHEMLTR 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
A S + Y + + ++S+ + + + IV A +V
Sbjct: 238 AHNYADASALTPFTYVFIVYLTIASILVFDEWPGAWTLVGAAIVAGAGLVI 288
>gi|320161105|ref|YP_004174329.1| hypothetical protein ANT_17030 [Anaerolinea thermophila UNI-1]
gi|319994958|dbj|BAJ63729.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1]
Length = 325
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/315 (11%), Positives = 106/315 (33%), Gaps = 25/315 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G + +LW T ++ ++L ++ VL + R L++ VF A+
Sbjct: 1 MNTSHSKGYVIALVGTLLWSATAVFIRYLNLEYKIPVLILAFWRDLFTAGIVFLAMALLK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L K V + +LAV + +++ +++ + + + G
Sbjct: 61 PSL-----IQKGFSHVRFFLGYGALLAVFNFLWTFSVFLNGAAISTVLAYSSAAFTAIFG 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS---------------- 179
+ +E L+ +I+A + I+ ++++ + + +
Sbjct: 116 WLLWREELHLPKIMAVVFSIIGCILVSGAHQVQQWTSNPIGILTGLLSGIAFAGYTLLGR 175
Query: 180 -AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
A T V + +L A F + W + + +
Sbjct: 176 LASQKRIPTPTVLGYTFLTAALLLLMANAFFPLKWIDSRNLLWLGNRWDGWMVLFLLALI 235
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ ++++ + S ++ P + S +L + + + + ++++ ++
Sbjct: 236 PTIGGYGLYTFSLNFLPASIANLIATLEPSFTALQSYLLLGERFTSDQILGSVLILLGVI 295
Query: 299 VYLLPTVINSGKNKT 313
+ L + S + +
Sbjct: 296 LLRLNEIRQSNQERR 310
>gi|218232429|ref|YP_002366378.1| transporter, EamA family [Bacillus cereus B4264]
gi|218160386|gb|ACK60378.1| transporter, EamA family [Bacillus cereus B4264]
Length = 303
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQELKHSSL----AGLIVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDLEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|282882911|ref|ZP_06291516.1| integral membrane protein [Peptoniphilus lacrimalis 315-B]
gi|281297322|gb|EFA89813.1| integral membrane protein [Peptoniphilus lacrimalis 315-B]
Length = 292
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 96/292 (32%), Gaps = 13/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +G L+ + I++GI P++T+ L ++ + +R+ ++ ++
Sbjct: 1 MKNKLGYLYAISSAIIYGIMPIFTKSLINFGINPITSSFYRM-----FLWLLPIFIYCKF 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ D K + + + + + +F+ P I + S
Sbjct: 56 IIKIDLSLKKKDLIEVFLAGALFGGTSITLFSSYKYLGAGCAESIHFIYPCIIFIIMSFV 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
K + + +I+A +L + + ++ S G+ L+ K+
Sbjct: 116 FKNKPSKAEILALILSCIGVFMLADFSDVHELSGVIYAVLSAFFFAFYSVSIEKSNMPNM 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + + + L+ L ++ I
Sbjct: 176 NVMKSLFYVNFFGAIVIGLYALVLKIPIKYDFSHGQWGFLLVYSFFLTIGATLLYQLAIF 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + GI+ P++ +++ I + + + I +V+A + +
Sbjct: 236 KIGATKTGILSTAEPIVSLIAGFIIFSEDMGINKIIAIIFIVLAAIYIVRRQ 287
>gi|258645457|ref|ZP_05732926.1| putative membrane protein [Dialister invisus DSM 15470]
gi|260402808|gb|EEW96355.1| putative membrane protein [Dialister invisus DSM 15470]
Length = 290
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/271 (9%), Positives = 70/271 (25%), Gaps = 1/271 (0%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + ++ + R L + I Y+ G + + + A+ M
Sbjct: 13 IWGFAFVAQVIGMDSIGPYAFNGIRFLLGSLSLLPIIYYYPSGRNPKEASFSIWVAILMA 72
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
A + + + +Y + + L+ I+A +
Sbjct: 73 GILLCGGATLQQVALQYTTASKTSFLTATYLLMVPVIGLFFGQVLRLNHIFGVILAMAGV 132
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ TL G + + A + + + ++
Sbjct: 133 YFISITETLDIGYGDFLVLLCAICYAAHIILLNYLTQRFPPVTLSSGQFMVVGICNLILA 192
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
F L L + + + G K + ++ + +
Sbjct: 193 FFFETVSISSILSSWWPILYTGILSTGVAYTLQAVGQKYLPATEATMLLSLEMVFGGLCG 252
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
V L + + I + + + +P+
Sbjct: 253 VLFLNESFTGKQLIGILCMTAGVFLAQIPSR 283
>gi|268678770|ref|YP_003303201.1| hypothetical protein Sdel_0128 [Sulfurospirillum deleyianum DSM
6946]
gi|268616801|gb|ACZ11166.1| protein of unknown function DUF6 transmembrane [Sulfurospirillum
deleyianum DSM 6946]
Length = 301
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/305 (10%), Positives = 83/305 (27%), Gaps = 15/305 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N L ++ + + WG T Q + + V + R + + V
Sbjct: 3 NYKLKELIADFLLLLVAVAWGSTFFVVQAAVNETPVYTFLFWRFFVAAVLMLLLSVRALR 62
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
N + + V T + + + F +AL F + ++ F+
Sbjct: 63 YF--------NTEVLKAGVLLGTFMFLGYAFQTFALTYTYSSTVGFITGLNVIVVPFISY 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ K + + A++ + L +T G + + F
Sbjct: 115 LIFKHKASLFSSFGAVVAAIGLYFLTLNSEIGFGLGEGYAFICAMMFALHIVFTGYYSTK 174
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ F + + + I F F + +
Sbjct: 175 HNVYLLVCIQFFTVALGSFIGGFVLEGAIMPPRIDGLFINAIAITVLFATIFAFWVQTAV 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + I+ P+ + + + + + +++ M++ L + +
Sbjct: 235 QRFTTAAKTAIIFTMEPVSAGLFGYWFANEVLSLSQIAGAFLILSGMLIAELGAYMVERR 294
Query: 311 NKTKK 315
+K
Sbjct: 295 RLKRK 299
>gi|154148080|ref|YP_001407140.1| transporter [Campylobacter hominis ATCC BAA-381]
gi|153804089|gb|ABS51096.1| transporter [Campylobacter hominis ATCC BAA-381]
Length = 296
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 92/295 (31%), Gaps = 13/295 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G F + I+WG + + ++L + + S R+L S +F IV+
Sbjct: 1 MKNSYLAGVFLAFISGIIWGFSGVCGEYLFTNKHFDPFWLTSVRLLASGLILF-TIVFTK 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + +++ LA+ + + + + + + P + +
Sbjct: 60 SKFKVFAIFSDRSALFDLGLYAVFGLALCQLTYYFTISYSNAAIATTLQYTAPAMIMIFV 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARK 186
+ + + IA + + H ++ L A+ Y A
Sbjct: 120 CIKERNFPTFREFIALVFATSGIFFFATHGNFQNLVISKEALIIGLLSALCVVIYSIAPI 179
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
I + + ++ +F++ + F G + + L F +
Sbjct: 180 KISQKYGTNAVLALGLIMSGGVFWIFYAIFGGEILPSIDFSAFLVICAIVFLGTICGFSL 239
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + ++ PL+ + F L + F ++++ V+
Sbjct: 240 YMIAVNFIGPKRASLVASIEPLMAALFGHFWLGSKFVFFDYLGFTLIILCAVLLS 294
>gi|87312165|ref|ZP_01094269.1| hypothetical protein DSM3645_25146 [Blastopirellula marina DSM
3645]
gi|87285139|gb|EAQ77069.1| hypothetical protein DSM3645_25146 [Blastopirellula marina DSM
3645]
Length = 286
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/279 (9%), Positives = 81/279 (29%), Gaps = 15/279 (5%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L + + + + S R+L + + + ++ +
Sbjct: 13 AAIWGGSFLLMRIMAPALGPFGLASSRLLIAGIVLVTFFTARGLEIEWRRNWRQYTVIAL 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + L ++ TP+ V ++ ER + ++ A+
Sbjct: 73 LNAAIPFTMFGFA------ALYIPAGYSAVINATTPIFGVAWSALVFGERPTWMMVVGAI 126
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT--------IPVGSSEGFFIEMCVLA 204
L +L + ++ + +A + + A G + +
Sbjct: 127 LGLLGVGVIAGLGPVAPSWELLAGSGACLTAAVCYSAAGVYIKTHTGRLKPMAVASAAQL 186
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
I + F + + + L ++ F ++ + + + Y
Sbjct: 187 IAGTLLIPGMAFYHPTPALITPLVIACTITLALLCSAVGFVLYYQLLADCGPTKALSVTY 246
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ ++ L + I + +V+ + +
Sbjct: 247 VVPVFGVLWGALFLGETITPLMIGGMALVIGGTFLLVRR 285
>gi|117921177|ref|YP_870369.1| hypothetical protein Shewana3_2736 [Shewanella sp. ANA-3]
gi|117613509|gb|ABK48963.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
ANA-3]
Length = 295
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 68/283 (24%), Gaps = 2/283 (0%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + +E +S R L + + Y + + T K+ +
Sbjct: 13 IWGFGFVAQTLGMEHLSPFAFNGLRFLIGTVSLVPLVWYLARQGKIHLGTPKDFAMGCGV 72
Query: 95 VFSATILAVH-WGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
V + + Y V I IA +
Sbjct: 73 VGGLLFAGASLQQVGLLYTTAANAGFITGLYIVLVPILGLALKHATGANTWLGCGIAVVG 132
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
+ + H G I + A + M + + ++
Sbjct: 133 LYFLSIKEGFHLGYGDTLQLIGALFWAMHILAVDHFAKRISPVLLAMMQFLVCGVLSLLV 192
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
+ + + + K A + I+ + +
Sbjct: 193 SAAIEVTTVDKVIAAWGSLAYAGLISVGIAYTLQVLAQKHAHPAHAAIILSLETVFAAIG 252
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ L + + G++++ M++ +P K S
Sbjct: 253 GILFLGESLGLRALFGCGLMLLGMLISQVPLRYLIKSRHQKVS 295
>gi|114048121|ref|YP_738671.1| hypothetical protein Shewmr7_2629 [Shewanella sp. MR-7]
gi|113889563|gb|ABI43614.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-7]
Length = 295
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/283 (10%), Positives = 68/283 (24%), Gaps = 2/283 (0%)
Query: 36 LWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + +E +S R L + + Y + + T K+ +
Sbjct: 13 IWGFGFVAQTLGMEHLSPFAFNGLRFLIGTVSLVPLVWYLARQGKIHLGTPKDFAIGCVA 72
Query: 95 VFSATILAVH-WGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
V + + Y V I IA +
Sbjct: 73 VGGLLFAGASLQQVGLLYTTAANAGFITGLYIVLVPILGLALRHATGANTWVGCGIAVVG 132
Query: 154 IILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
+ + H G I + A + M + + ++
Sbjct: 133 LYFLSIRDGFHLGYGDTLQLIGALFWAMHILAVDHFAKRISPVLLAMMQFLVCGVLSLLV 192
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
+ + + + K A + I+ + +
Sbjct: 193 SAAIEVTTVDKVIAAWGSLAYAGLISVGIAYTLQVLAQKHAHPAHAAIILSLETVFAAIG 252
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ L + + G++++ M++ LP K S
Sbjct: 253 GILFLGESLGLRALFGCGLMLLGMLISQLPLRYLIKSRHQKVS 295
>gi|75759689|ref|ZP_00739772.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228900276|ref|ZP_04064506.1| Transporter, EamA [Bacillus thuringiensis IBL 4222]
gi|74492836|gb|EAO55969.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228859311|gb|EEN03741.1| Transporter, EamA [Bacillus thuringiensis IBL 4222]
Length = 303
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 88/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKNTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATAGLYLLTAADSFQLNIGDILVLGCAIAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ P+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVEWPSKTKK 298
>gi|15892029|ref|NP_359743.1| hypothetical protein RC0106 [Rickettsia conorii str. Malish 7]
gi|34580935|ref|ZP_00142415.1| hypothetical protein [Rickettsia sibirica 246]
gi|229586319|ref|YP_002844820.1| S-adenosylmethionine transporter [Rickettsia africae ESF-5]
gi|81528548|sp|Q92JG1|SAM_RICCN RecName: Full=S-adenosylmethionine uptake transporter
gi|15619146|gb|AAL02644.1| unknown [Rickettsia conorii str. Malish 7]
gi|28262320|gb|EAA25824.1| unknown [Rickettsia sibirica 246]
gi|228021369|gb|ACP53077.1| S-adenosylmethionine transporter [Rickettsia africae ESF-5]
Length = 294
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 89/297 (29%), Gaps = 8/297 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + + +++L + EV R +S + +VY+
Sbjct: 1 MNDALKTYLTGIGWFLLSLVSSSANDVISKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + +L + Y L + F P+ ++ L
Sbjct: 61 GKN-------TLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E + + + ++ + L++ + +A FA I
Sbjct: 114 AVFFLNENIIWPRWVVTVVGFIGLVVTLKPHAEDFNPEILYFVLAAISFAMLDIINKKFV 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ + + +++ + + L G S +
Sbjct: 174 IKESMISMLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y ++ ++++ FI + D I++ + + +
Sbjct: 234 DATATAPYRYLELVISVIAAYFIFNEFPDKSTLHGAVIIIPTTLFIIYSEKKAMNRK 290
>gi|311896179|dbj|BAJ28587.1| hypothetical protein KSE_27760 [Kitasatospora setae KM-6054]
Length = 336
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/286 (6%), Positives = 61/286 (21%), Gaps = 12/286 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G + + +G + + L +S + RV + + +
Sbjct: 43 LGLALALVSAVAFGGSGTAAKPLIEAGLSPAHTVWLRVAGAALVLLPVAWRHRDAVLRRP 102
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L + + A A + L + ++ S
Sbjct: 103 GVLLGFGLLAVAGVQACYFAAISRIPVGVALLIEYLGPPLLIAYVRLVQRRPVSRRAMAG 162
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A ++ + + G+ A + A
Sbjct: 163 AGVAVAGLACVVEVWNGLSFDALGVLFALGAACCQVGYFVLADAGRRGERPVAPLAVSAY 222
Query: 203 LAIPALFYVVWNGFSGGEHFF----------LGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + L + + ++
Sbjct: 223 GLLIGAVLLTAATRPWNADWSLLGRSVSMNGHQLPALVPALWMVLVATVLAYLTGVVSVQ 282
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G++ ++ V + +L + + + +V+
Sbjct: 283 HLSPPVAGVVANLEAVVATVLAWILLGEHLGAPQLAGGALVLAGAF 328
>gi|332852661|ref|ZP_08434315.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332869377|ref|ZP_08438755.1| putative membrane protein [Acinetobacter baumannii 6013113]
gi|332729129|gb|EGJ60476.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332732795|gb|EGJ64011.1| putative membrane protein [Acinetobacter baumannii 6013113]
Length = 306
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 86/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + L
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFLSVWRQRRLVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + + Y F +
Sbjct: 128 FAVFGSILSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKKWQLPLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVLFHLPLIFWFGLEALNSQNAPSAIYAGVFASLIAPLVWMLAVQQLGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + + L + T ++++ +++
Sbjct: 248 RTSIFMNLVPVFTAIIASIWLSEQWTIYHTFGGIMILVGIIM 289
>gi|257452536|ref|ZP_05617835.1| hypothetical protein F3_05662 [Fusobacterium sp. 3_1_5R]
Length = 321
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 96/295 (32%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ F F A +L+ + +++ L EQ+S + + S + G+ + G
Sbjct: 2 NNKIISIFFAFIAAMLYALNIPFSKLLLEQISPVFMASFLYFGAGIGMLCLSLLKKGNKE 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T K ++F + + F + + S V + + F
Sbjct: 62 QNKLTKKELPYTLGMIFLDILAPISLMFGLKWISPTNA---SLLNNFEIVATSCIALFFF 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIPVGSSEGF 196
+E+++ A LLI LS ++++L L A+ + S
Sbjct: 119 QEKISSKMWAAILLITLSSVLLSLDEQTNLSFSYGAIFILLACIFWGMENNCTRMLSSKN 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+++ VL + + + LI L + K
Sbjct: 179 IVQIVVLKGICSGFGSFIVAFVIGEHLPHFFLILIILILGFLSYGLSIFFYVKAQKELGA 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P + S I ++ + + I+++ ++ +L T+ K+
Sbjct: 239 AKTSAYYSINPFIGTFLSFLIFQEKLSKYYFLALFIMILGTILVILDTLFIKHKH 293
>gi|253997454|ref|YP_003049518.1| hypothetical protein Mmol_2089 [Methylotenera mobilis JLW8]
gi|253984133|gb|ACT48991.1| protein of unknown function DUF6 transmembrane [Methylotenera
mobilis JLW8]
Length = 305
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 98/301 (32%), Gaps = 16/301 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
EN++ + + + I+WG + + L+ + + RV + +F I
Sbjct: 1 MENSTKKIISAFVALIVLTIIWGYNWVVMKSALQYAGPFQFAAMRVFFGAVVLFVVIYAT 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L L + MLV G I+AL+ T+ + P +
Sbjct: 61 KRPLGL-------KEFPTMLVLGLLQTVGFTGLLIWALVEGGAGKTAVLTYTMPFWVMLF 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA--------VTWSAYCFARK 186
L E++ Q +A + + +L++ I ++ SA +
Sbjct: 114 AWPMLGEKVQGWQWLAVISAVFGMLLIFDPLHIRADGFSMFLAIISGVSWALSAIISKKL 173
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + ++ + L L + + +
Sbjct: 174 HQRSPHLDLLNLTAWPMLLGSVPMLAIAFIVPAPPIQWTGYFIGSVLFNVFLSGALAWLL 233
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y ++ + AP++ ++++ L + + + I ++ +++V+ ++
Sbjct: 234 WLYALQILPAGVASMASMLAPVIGVLAAWIQLNEVPNRMELIGMVLIALSLVIISFVSIK 293
Query: 307 N 307
Sbjct: 294 K 294
>gi|124267330|ref|YP_001021334.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
gi|124260105|gb|ABM95099.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
Length = 302
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 97/301 (32%), Gaps = 20/301 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + LWG + L+ + + + + RVL + + ++ L +L+
Sbjct: 6 VLELCLLAALWGASFLFMRLGAGEFGPVALAGLRVLGATLFLLP-LLAARRQLGVLRTHW 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ VG+ + LA YA L L+S TP+ + ++LK+RL
Sbjct: 65 RDIFLVGLANSALPFLAYS-----YAALAITAGLSSIFNATTPLWGALIAWLWLKDRLTP 119
Query: 146 LQIIAALLIILSLLIMTL------------HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+++ L+ +L + +G +++ A + + +
Sbjct: 120 SRVLGLLIGFSGVLWLAWDKASFKPGADGTSTGWAIVACLGATLLYGWSASFTKKRLTGV 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ AL + + + + +F I R
Sbjct: 180 APLAVATGSQVSAALVLTLPMLWFWP-TQAPSATAWLAVGLLALACTGVAYVLFFRLIAR 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S + + P ++ L + I T I ++++ + + G+ KT
Sbjct: 239 IGPSNTIAVTFLIPAFAVLWGWIFLAEGITTAMVIGCAVILVGTALTTGLVTLPLGRRKT 298
Query: 314 K 314
Sbjct: 299 A 299
>gi|239906783|ref|YP_002953524.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
gi|239796649|dbj|BAH75638.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
Length = 295
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 87/296 (29%), Gaps = 15/296 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ + A ILWG + + + + + S L + R+ + +
Sbjct: 2 SWAAFFALVGASILWGSSFIAMKIAMREFSPLLAVFCRMAVASAVFALI------WKRMG 55
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
G++ + +++ F AL Q + PV++ S L+E
Sbjct: 56 GFAAGRADWKGIVFMAFCEPCLYFIFESQALTMTQASQAGMITAMLPVMTAVAASFVLQE 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKTIPVGSS 193
+L + LL + + +M+L L A + + +
Sbjct: 116 KLEVRAMTGLLLAVAGVAVMSLAGEAGPQAPRPILGNFLEFLAMCCAVGYIITCKKLAAR 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + L P + + +++YG+
Sbjct: 176 HKPLYLTAAQSFVGMAFFSPALVFAPMPAKLTFGPVAAVFFLGLAVTFVAYGLYNYGVCN 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + P++ + S IL + ++ + + V+ + + P
Sbjct: 236 APAAKAAAFINLIPVITCLLSWLILDETLNAGQLLGGATVLGGVGLSARPARKGRK 291
>gi|187924641|ref|YP_001896283.1| hypothetical protein Bphyt_2664 [Burkholderia phytofirmans PsJN]
gi|187715835|gb|ACD17059.1| protein of unknown function DUF6 transmembrane [Burkholderia
phytofirmans PsJN]
Length = 309
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/300 (12%), Positives = 89/300 (29%), Gaps = 3/300 (1%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVF 68
+S+GL L + Y++WG T L L L + R L++ G+F
Sbjct: 9 FSRGLPIRLPQSRNGQVALALAVVYLVWGSTYLAVHVALGSFPPLLLSGMRNLFAGVGLF 68
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
+ + MLV ++ + + + + +
Sbjct: 69 IFAARRNPVWPSAAEIRNAGLVGTMLVGLSSGMLAYGMRTVG--TGTAAVMVATVPLFAT 126
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
VI+ G + + + + ILS S L++ + A
Sbjct: 127 VIAAVAGRKIGRGEWFAVGLGLVGIAILSHGDSAPGSAGGSLAILCGALFWAGGAHLAGR 186
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S+ F + + + SG + +P F+ + + +
Sbjct: 187 LKLPSDLFLSTSLQIGLGGAMSTLVAWVSGERMLEVHFLPVLAFIYLMLIGTMAAYVAYG 246
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I+ Y P++ + +L +P+ + +++ ++ +
Sbjct: 247 FLIRHTSPIIASSCMYVNPVVAVALGALLLGEPVTRSTVVATVVILASVGLSFWFDYRKK 306
>gi|86747376|ref|YP_483872.1| hypothetical protein RPB_0250 [Rhodopseudomonas palustris HaA2]
gi|86570404|gb|ABD04961.1| Protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris HaA2]
Length = 304
Score = 66.9 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/263 (11%), Positives = 72/263 (27%), Gaps = 8/263 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + A + + + + V E + R + L + I L+
Sbjct: 20 GIVLMLLAMLAFSFADAVGKKVVATYPVGEFLLLRAIAGLVLLAPLIWRQRAAFIRLERP 79
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + F + + Y + + ++FL E ++
Sbjct: 80 GLQLARMLVSAFEVAAFFLA-------TVYLPLADVITFYLASALFVSVGAALFLGETID 132
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ IA L+ +LI S + A+ ++ FA +
Sbjct: 133 RARAIAILVGFAGVLIALQPSPQTMSWPALIAILASVLFAALMLITRFLRRTPEIALATQ 192
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
++ + + D ++ + G+ ++ + ++ A S V +Y
Sbjct: 193 QFIGTALLGSVLLAPSGWIAPPPADWIWFVLAGVGSAAGLLCVNRSLRLAPASVVVPYQY 252
Query: 265 TAPLLMIVSSVFILKQPIDTVRT 287
T +
Sbjct: 253 TMIIFAAALGWLFFGDVPTLSTL 275
>gi|167589488|ref|ZP_02381876.1| hypothetical protein BuboB_29408 [Burkholderia ubonensis Bu]
Length = 353
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 81/291 (27%), Gaps = 7/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGI-TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + A L+G TPL L +S V L S G+ IV
Sbjct: 2 HSRLNAIVVALTAAALFGAATPLAKALLGAMSPFMVAGLFYLGSGIGLGAGIVIRRLRRP 61
Query: 80 LLKDTL----KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
K + + A + L + ++ + V++ +
Sbjct: 62 AAHADAGHALKKSELPWLAGAIAAGGVAGPALLMLGLASTPAATSALLLNLEGVLTAVIA 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
V +E ++ + + I+ ++++ G + + A +
Sbjct: 122 WVVFRENVDLQVFLGMVAIVAGGVLLSWKPGAAGVPTGALLIVGACLCWAIDNNLTRKVS 181
Query: 196 F--FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + V + ++ +F ++
Sbjct: 182 ANDAMVIACMKGLVAGPVNIAVAVAAGAAWPAAATTAAAMLTGLAGYGVSLVLFVVALRD 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G APL + S+ I +P I ++ + + +++
Sbjct: 242 LGTARTGAYFSVAPLFGVALSLLIWPEPPSVAFWIAAALMALGIWLHVRER 292
>gi|84386624|ref|ZP_00989650.1| transporter, drug/metabolite exporter family [Vibrio splendidus
12B01]
gi|84378430|gb|EAP95287.1| transporter, drug/metabolite exporter family [Vibrio splendidus
12B01]
Length = 288
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 110/294 (37%), Gaps = 12/294 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ M G L++ A +L G+ + ++ + ++ I R L + + ++
Sbjct: 2 MNVKAMRGELYLLFATLLAGVGWVASKLVVLEMPGPVFIGVRFLVASLILLPFCIHHIRK 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
LSL + + + + A + +T +F + +I+ F+ +
Sbjct: 62 LSL-------KQVLSLCGVGLLLSASLQVWVFAVSVTESLSEGAFIMSLAMIIAPFVSWI 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSS 193
+ + N ++ + I+ +L++TL +G + +A + F + +
Sbjct: 115 VFRVKPNRAFWMSFPIAIIGMLLLTLGNGWNVEQSQIYFLLASMLLSVHFVMNKRVITNI 174
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L + + + + + F + F++ + S + + + G
Sbjct: 175 KPIASICVQLFVVGVSGLAFASMTAQPEFEITKTLVFWFIVSAVIATSIRYLLQTVGQHS 234
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ P+ ++ SV +L + ++ + + +++ ++ Y+ +
Sbjct: 235 VNMEVAALIMILEPVWTLLLSVSVLGESVEMQKLLGGAVIIASLFCYIKWSRRK 288
>gi|22125490|ref|NP_668913.1| hypothetical protein y1595 [Yersinia pestis KIM 10]
gi|45442191|ref|NP_993730.1| hypothetical protein YP_2402 [Yersinia pestis biovar Microtus str.
91001]
gi|108808077|ref|YP_651993.1| hypothetical protein YPA_2082 [Yersinia pestis Antiqua]
gi|108812347|ref|YP_648114.1| hypothetical protein YPN_2185 [Yersinia pestis Nepal516]
gi|145599277|ref|YP_001163353.1| hypothetical protein YPDSF_1999 [Yersinia pestis Pestoides F]
gi|149365235|ref|ZP_01887270.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162421161|ref|YP_001604975.1| hypothetical protein YpAngola_A0367 [Yersinia pestis Angola]
gi|165925153|ref|ZP_02220985.1| integral membrane protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937069|ref|ZP_02225634.1| integral membrane protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008450|ref|ZP_02229348.1| integral membrane protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214230|ref|ZP_02240265.1| integral membrane protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399105|ref|ZP_02304629.1| integral membrane protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421209|ref|ZP_02312962.1| integral membrane protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424672|ref|ZP_02316425.1| integral membrane protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167469273|ref|ZP_02333977.1| integral membrane protein [Yersinia pestis FV-1]
gi|218929833|ref|YP_002347708.1| hypothetical protein YPO2761 [Yersinia pestis CO92]
gi|229838330|ref|ZP_04458489.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229895360|ref|ZP_04510533.1| putative membrane protein [Yersinia pestis Pestoides A]
gi|229898896|ref|ZP_04514041.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902703|ref|ZP_04517820.1| putative membrane protein [Yersinia pestis Nepal516]
gi|270490121|ref|ZP_06207195.1| putative membrane protein [Yersinia pestis KIM D27]
gi|294504653|ref|YP_003568715.1| hypothetical protein YPZ3_2543 [Yersinia pestis Z176003]
gi|21958385|gb|AAM85164.1|AE013762_6 hypothetical [Yersinia pestis KIM 10]
gi|45437055|gb|AAS62607.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108775995|gb|ABG18514.1| membrane protein [Yersinia pestis Nepal516]
gi|108779990|gb|ABG14048.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115348444|emb|CAL21380.1| putative membrane protein [Yersinia pestis CO92]
gi|145210973|gb|ABP40380.1| membrane protein [Yersinia pestis Pestoides F]
gi|149291648|gb|EDM41722.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162353976|gb|ABX87924.1| integral membrane protein [Yersinia pestis Angola]
gi|165914932|gb|EDR33544.1| integral membrane protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922760|gb|EDR39911.1| integral membrane protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992832|gb|EDR45133.1| integral membrane protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204586|gb|EDR49066.1| integral membrane protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960698|gb|EDR56719.1| integral membrane protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051609|gb|EDR63017.1| integral membrane protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056554|gb|EDR66323.1| integral membrane protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680150|gb|EEO76249.1| putative membrane protein [Yersinia pestis Nepal516]
gi|229688444|gb|EEO80515.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694696|gb|EEO84743.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701668|gb|EEO89694.1| putative membrane protein [Yersinia pestis Pestoides A]
gi|262362714|gb|ACY59435.1| hypothetical protein YPD4_2528 [Yersinia pestis D106004]
gi|262366641|gb|ACY63198.1| hypothetical protein YPD8_2523 [Yersinia pestis D182038]
gi|270338625|gb|EFA49402.1| putative membrane protein [Yersinia pestis KIM D27]
gi|294355112|gb|ADE65453.1| hypothetical protein YPZ3_2543 [Yersinia pestis Z176003]
gi|320014562|gb|ADV98133.1| putative membrane protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 305
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 85/278 (30%), Gaps = 5/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV--YFSGGLSLLKD 83
LF A I+W + + ++ + + +R L +L + ++ ++
Sbjct: 3 VLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIRVY 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV--FLGSVFLKE 141
K + + LA + + AL V I + +V +
Sbjct: 63 WWKLMLLGMLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIAL 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LI + L GI L + ++Y + + +
Sbjct: 123 GSLLSLGGLVWLISAGNPVQLLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPNWQSL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I ++ GF L L L + ++ G+ R +T I
Sbjct: 183 YMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTASI 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + +V L + + + I GI + +V+
Sbjct: 243 FMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVL 280
>gi|311105549|ref|YP_003978402.1| hypothetical protein AXYL_02366 [Achromobacter xylosoxidans A8]
gi|310760238|gb|ADP15687.1| hypothetical protein AXYL_02366 [Achromobacter xylosoxidans A8]
Length = 300
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 88/298 (29%), Gaps = 15/298 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A + W + ++ +S + +R++ +L + F+ G +
Sbjct: 3 YLFPLFAILFWAGNVIVSKMAASAISPTAITFYRLVLALFLMGL----FTAGPAWRNRKT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ A A+ A T + + P++S+ L V L++ L
Sbjct: 59 ILRHWPKLALYGALSSALFQALSYRAAETTTATNMAILTALIPLLSMLLSVVILRDPLTL 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
L L LL + + + +A A
Sbjct: 119 GMAAGGALSFLGLLYLVGQGDMLSVFQHGIHVGDGLMLLAALSYALYGVLLRHWKVPLPA 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L+ + L L L + + ++ G+ R
Sbjct: 179 WQSTFVQSIFALLYMLPLYLRVPAAQAALDMNTIPLILYAGIFSSVLLSYLWIEGVHRLG 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ I PL +++ +L++ + + + + +++ G+ +
Sbjct: 239 PNRCSIFINLLPLFTALAAFVLLREQLHLYHLLGGAVTLAGVLLAQTVQRPLFGRARA 296
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 41/135 (30%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
+ L A+ + A + + I L + ++ +
Sbjct: 1 MSYLFPLFAILFWAGNVIVSKMAASAISPTAITFYRLVLALFLMGLFTAGPAWRNRKTIL 60
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+ L ++ + + + + I+ PLL ++ SV IL+ P+
Sbjct: 61 RHWPKLALYGALSSALFQALSYRAAETTTATNMAILTALIPLLSMLLSVVILRDPLTLGM 120
Query: 287 TIVFGIVVIAMVVYL 301
+ + ++ +
Sbjct: 121 AAGGALSFLGLLYLV 135
>gi|307945730|ref|ZP_07661066.1| permease [Roseibium sp. TrichSKD4]
gi|307771603|gb|EFO30828.1| permease [Roseibium sp. TrichSKD4]
Length = 315
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/313 (11%), Positives = 90/313 (28%), Gaps = 20/313 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
MMG + + + + + + V + +V+ R + + V + +
Sbjct: 2 TRHAPMMGIALKVLSTVAFFFMVTLLKLVAETVPIGQVVFARNFFGMFPVLIMVAFRGEL 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K + A + A + F TP++ V L
Sbjct: 62 MLAFKTKRASGHIGR-----AMVGVTAMVCSFTAFHLLPLADATAIGFATPLMVVVLAFF 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-------------SGIPLLSLAIAVTWSAYCFA 184
L E++ + A L+ +L++ + A+ +
Sbjct: 117 LLGEKVRIFRWSAVLVGFTGILVILSPHLGEGDFKDGQAVGAVCAALGALFAALAMIFVR 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ ++ + +L + + + + + L L+ GL
Sbjct: 177 KLCETERTATIVTWFAGFATVFSLLTIPLGFVFPSQAWVMPDGVTALLLVLVGLSGGVGQ 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + A ST+ +Y I + + IV+ A + +
Sbjct: 237 ILLTQSYRFADASTIAPFDYINMFWAIAVGWLLFSDTPSAPVLVGSAIVIAAGIFVIYRE 296
Query: 305 VINSG-KNKTKKS 316
+ KT+++
Sbjct: 297 HRLGLDRTKTRRA 309
>gi|302551024|ref|ZP_07303366.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302468642|gb|EFL31735.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length = 309
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 81/294 (27%), Gaps = 9/294 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G ++WG+ L + ++ VS V+ R + + G +
Sbjct: 2 TARGWFLFSLMGVVWGVPYLMIKVAVDAVSPSMVVFTRCALGAALLLPFALRQGGFGRTV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K A ++ + + T V V + E
Sbjct: 62 RAHWKPMLAFAVIEIVGPWWTLTDAERHLSSSTAGL----LIAGVPIVALLLARFFGAGE 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ ++I L + + ++TL +L++A + + +
Sbjct: 118 HVGARRVIGLALGLAGVTVLTLPHLTGGDALSMAEVLVTVVGYATAPLIAARYLKDVPTL 177
Query: 202 VLAIPALFYVVWNG----FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L P L F + + F F IK +
Sbjct: 178 QLITPCLTLAAVVYAPAAFLTRPAAMPSGEVLAALAGLGVICTAIAFVAFLELIKEIGPT 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G++ Y P + + + L + + + F +++ V+ +
Sbjct: 238 RAGVITYVNPAVAVAAGAVFLDEELTLGIGVAFTLILAGSVLATAVAPKRDVRR 291
>gi|326202149|ref|ZP_08192019.1| protein of unknown function DUF6 transmembrane [Clostridium
papyrosolvens DSM 2782]
gi|325987944|gb|EGD48770.1| protein of unknown function DUF6 transmembrane [Clostridium
papyrosolvens DSM 2782]
Length = 293
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 81/277 (29%), Gaps = 13/277 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L +FCA +WG + + ++ S ++ R + + +
Sbjct: 8 LALFCAAFIWGSSFFIMKDTVDVFSPHILLGFRFTIACILLGVIFCRRLKSI-------- 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + L + + + +F + VI FL + K + +
Sbjct: 60 TFEYLWKGGVIGLFLFLGYSTQTIGITNTTPGKNAFLTAIYCVIVPFLFWLVDKSKPDIY 119
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
AA++ + + ++++ GI + A + + +
Sbjct: 120 NYSAAVICLTGIGLVSITGSLTIGIGDAFTLLGGFIYAAHLVSVAKLGKGKDPIVLTIIQ 179
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A+ + + + L + + G K S I+
Sbjct: 180 FGFAAVLSWITGLTTEHIPTEVSIQNVAGILYLAVFATAVALLFQNIGQKYTHPSAAAII 239
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ S+ + + F ++ IA+V+
Sbjct: 240 LSLESVFGVMFSIIFYGEQLTVRLVWGFLLIFIAIVI 276
>gi|229046743|ref|ZP_04192386.1| Transporter, EamA [Bacillus cereus AH676]
gi|228724561|gb|EEL75875.1| Transporter, EamA [Bacillus cereus AH676]
Length = 312
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 92/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 9 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K ++ A++ F+ ++ S ++P+ + L +
Sbjct: 69 RIEKKDWLR-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L I + A +
Sbjct: 124 KQERFSMKVQIGSIVAFIGAAFVLLTGHIGGTTYEYAWLGNIIGLVAAIAWGWYPILAQP 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 184 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIIFATIFGLAMW 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 244 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 303
>gi|229078878|ref|ZP_04211430.1| Transporter, EamA [Bacillus cereus Rock4-2]
gi|228704292|gb|EEL56726.1| Transporter, EamA [Bacillus cereus Rock4-2]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQELKHSSL----AGLIVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ ++ L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIVVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|319793516|ref|YP_004155156.1| hypothetical protein Varpa_2853 [Variovorax paradoxus EPS]
gi|315595979|gb|ADU37045.1| protein of unknown function DUF6 transmembrane [Variovorax
paradoxus EPS]
Length = 307
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 77/291 (26%), Gaps = 12/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ ++WG + T+ L Q E+ R L+++ + + + G +
Sbjct: 9 VWLMVVVTLMWGTAGVVTRHLTQAHSFEITFWRSLFTMLALLVILPLWRGRAVFSQLRSG 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V A + A S P+++ +F+ RL
Sbjct: 69 GRELWISGVCWAVMFTAFMVALTMASTASVLVTMSLG----PLLTALAARIFIGHRLPAR 124
Query: 147 QIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+A ++ L + M L +L A + ++G I
Sbjct: 125 TWVAIVVAGLGIGWMYGTQLVQGGAGGASLLGTLVALCVPLASATNWTVVQHAHAKGHDI 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F L + + + K
Sbjct: 185 DLVPAVLIGAVLTALFTLPFALPFQASAHDLGLLAFLGVFQLAIPCVLSVLCAQVLKAPE 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
V ++ + I + + +V+ A+V L +
Sbjct: 245 VALLALLEVIFGIALAWLGAGEEPAASVLTGGALVIGALVFNELLALRGRR 295
>gi|303326542|ref|ZP_07356985.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
gi|302864458|gb|EFL87389.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
Length = 311
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 90/298 (30%), Gaps = 5/298 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+MG + +G+ PL+T L V+ + +R L + + +
Sbjct: 13 EAVMGFFLGLFSSATFGLIPLFTLPLLHAGVTAETALFYRFLIATLTLGGLLAARGERFR 72
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQG---FLTSFSYFVTPVISVFLGS 136
L + ++ A +L ++ + + + +
Sbjct: 73 TRGVDLCKLAGMSVMYMLAALLFFWAFSYLPSGVAATLQFLYPVMVMLIMIVFFHERFSW 132
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + +A L ++ + L A+ S Y +T + + G
Sbjct: 133 TIALSIILAVSGVALLSSGPGDGGTSISLLGVGMMLLSALCNSLYIVGIQTARIPNMSGL 192
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ V+ AL ++ +G + + + I+R
Sbjct: 193 VMTFYVMLFSALLSLINALGTGTFQILTSWRELGIAALLAVVTAVLSNLTLILAIQRIGS 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ ++ PL ++ + + +P ++ ++++ +L I + + +
Sbjct: 253 TMTSVLGVMEPLTAVMVGILVFGEPFSPGLAGGVALIAASVLLVMLGGHIRALLCRAR 310
>gi|298506705|gb|ADI85428.1| membrane protein, putative [Geobacter sulfurreducens KN400]
Length = 299
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/303 (11%), Positives = 88/303 (29%), Gaps = 11/303 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV 72
+ + G F+ A ILWG T + + + + R+ + V
Sbjct: 1 MGGSGMAQAGRGGAWFILAAAILWGTTGTSQALAPVGANPMTIGALRLAVGGLALLLLAV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G ++ + L I + FF T T +PV++
Sbjct: 61 ARGGFTKGMR-----WPLIPTLCAGGCIASYQLTFFAAVKTTGVAVGTMVGIGSSPVMAG 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----AIAVTWSAYCFARKT 187
L + L ER A L + ++ G ++ A+ S +
Sbjct: 116 ILAFLVLGERPGRRWAGATALAVAGCSLLLATGGEVSVNPLGIALALGAGLSYAAYTLAI 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + V + + + L + + + +F
Sbjct: 176 KTLLAGRSPDAVIAVAFCLGALLLAPLLVGADLSWIPSVRGAVVVLHLGLIATALSYRLF 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ G++ +++ + PL + V ++ + + ++ + + +
Sbjct: 236 ARGLQTVPVASAVTLSLAEPLTATILGVTVVGERLTLTSLGGILLIFGGLALLAVGPRNR 295
Query: 308 SGK 310
S +
Sbjct: 296 SVR 298
>gi|228996808|ref|ZP_04156442.1| Transporter, EamA [Bacillus mycoides Rock3-17]
gi|229004484|ref|ZP_04162225.1| Transporter, EamA [Bacillus mycoides Rock1-4]
gi|228756769|gb|EEM06073.1| Transporter, EamA [Bacillus mycoides Rock1-4]
gi|228762869|gb|EEM11782.1| Transporter, EamA [Bacillus mycoides Rock3-17]
Length = 301
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/292 (15%), Positives = 90/292 (30%), Gaps = 15/292 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T + Q + V R L++ + F FS S +
Sbjct: 9 LALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQFIFSKKTSKQEVQHS 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + L + + + LL F ++ V+ L +FLK+R+
Sbjct: 69 SIAGLII----GFFLFIGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLKQRVTPF 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IPVGSSEGF 196
I+ L ++T L I V A FA P+ S
Sbjct: 125 IILGITAATAGLYLLTAGDSFQLNIGDILVLGCAIAFAAHILINGVFSKKISPLLLSTSQ 184
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + + F + + L S F I + K
Sbjct: 185 VLSVGIFSSICAFLFEDWKKLFSISLWTNSAFLFALLATSVFATSIAFFIQTAAQKHTSP 244
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ V I+ P+ ++ V + + + + + + M+ LP+
Sbjct: 245 TRVAIIFAMEPVFAALTGVLVANEQLSIPTVLGCLCIFLGMIFVELPSKAKK 296
>gi|123441641|ref|YP_001005626.1| hypothetical protein YE1305 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088602|emb|CAL11397.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 294
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 93/293 (31%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A I+W I + ++ + + +R + +L + ++ +
Sbjct: 3 VLFPLFAVIIWSINAVVSKVSATAIDPAAISFYRWVLALLTLTPFLL----MGVIRNWQA 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + ++ YA + + P+++V + V L+
Sbjct: 59 IRVYWWKLMILGLLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVVLRVAPTV 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L + L+ + GI L + ++Y + +
Sbjct: 119 GIALGSVLSLGGLVWLVSAGNPAQLLQHGIGKGELMMFGASASYALYGVLTKRWAIQLPN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F L L L + ++ +G+ R +
Sbjct: 179 WQSLYIQIVFGVVLLLPNFLLAADVQLTAQNIPLVLFAGIPASIIAPYLWIHGVMRLGAN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T I P+ + +V L + + + I GI + +++ K
Sbjct: 239 TASIFMNLTPVFTAIIAVTFLHEQLHSYHLIGGGITLAGVILAQRLRTPLRRK 291
>gi|91762207|ref|ZP_01264172.1| hypothetical protein PU1002_03041 [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718009|gb|EAS84659.1| hypothetical protein PU1002_03041 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 293
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/291 (15%), Positives = 100/291 (34%), Gaps = 5/291 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G + VF L + E ++ +++ R L+ V ++
Sbjct: 5 NKIPGPILVFMGACCLSFGGLIVKSFEGSTLWQILFWRSLFFSLTVLLFLIITYKKKLFK 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+F IL+ + +++A+ T+F + G +FLKE
Sbjct: 65 AFYDSGLP----GLFGGVILSFGFCGYVFAMYNTTVANTNFIISTQILFLAIFGYLFLKE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + + + +L I +L+M +S P +S I + ++M
Sbjct: 121 TISSITLASIILAITGVLLMVGNSLSPGEMSGNLAAFSMPITFAVLIIIVRKFP-TVDMV 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A + GF E + + L F F + G + + VGI
Sbjct: 180 PAQFIAGVSSCFIGFLLSEKLMISSHDIFLGFTAGFFQVGFGFIFITMGARSTPSAMVGI 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + +L + + + I G+++ A+++ + ++ K K
Sbjct: 240 IMLSESVLGPMWAFLFAAERPSLFTLIGGGVILFAVLLQFYSLLFSNKKEK 290
>gi|296875913|ref|ZP_06899973.1| membrane protein [Streptococcus parasanguinis ATCC 15912]
gi|296433075|gb|EFH18862.1| membrane protein [Streptococcus parasanguinis ATCC 15912]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 98/300 (32%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
TM GTL A I WG++ Q+L + + + + R++ S +
Sbjct: 2 SKTMKGTLMTLIAGIAWGLSGACGQYLMAHGFTAIGLTTIRLIISGAVLLLLAFLADKKR 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
T ++ +L L + ++ A+ + ++ PV + +
Sbjct: 62 VRAFLTDRSSYLPLLLFAFLG-LLMTQLTYLEAIHATNAGTATVLQYLCPVGVLAYSCIK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ +II+ +L I ++ H L+ + ++ + I +
Sbjct: 121 DRVAPTVSEIISMVLAIAGTFLIATHGQLNQLAITPKGLAWGLVSAFAYALYIILPIQLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + + ++ H + + F + +F G
Sbjct: 181 QKWGSMLVIGIGMLIPGLMMIPFTGRRLFHGQYSMDNLMGLIGLVVIGTIFAYTVFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+ + + I ++++A+++ L ++ +
Sbjct: 241 SLVGPVKGSLLASIEPISAVFFAFAIMNEHFFAIDFIGMAMILLAVLLISLKDLMIQKEK 300
>gi|282860489|ref|ZP_06269555.1| protein of unknown function DUF6 transmembrane [Streptomyces sp.
ACTE]
gi|282564225|gb|EFB69761.1| protein of unknown function DUF6 transmembrane [Streptomyces sp.
ACTE]
Length = 305
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 86/280 (30%), Gaps = 18/280 (6%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
A ++WG T L T L L + R L + + + +
Sbjct: 11 ALTALAPLIWGSTYLVTTETLPPGRPLLAATVRALPAGLILLAI----------GRTLPR 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V + A G + + V P I + L ++ LKER+ +
Sbjct: 61 GGWWWRAAVLGTLNIGAFLYLLFVAAYHLPGGVAALVMAVQPTIVLALSALLLKERITPV 120
Query: 147 QIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
A L I+ + ++ L G+ L S ++
Sbjct: 121 HAAACALGIVGVGLLALTPRAELDPVGVGAGLLGAVSMASGIVLTKRWGRPPGVGLLTFT 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L+ L + G + F + F + I+ G++R TV
Sbjct: 181 GWQLSFGGLLLLPVTLLGEGLPGAVSGRNVAGFAYLGIIGALFAYAIWFRGVERLPALTV 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + +PL +L + +D + VV A+V+
Sbjct: 241 SMLGFASPLAATALGYLVLHETLDPAQIAGALTVVAAVVL 280
Score = 41.0 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 22/75 (29%)
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ L + ++ P +++ S +LK+ I V
Sbjct: 63 WWWRAAVLGTLNIGAFLYLLFVAAYHLPGGVAALVMAVQPTIVLALSALLLKERITPVHA 122
Query: 288 IVFGIVVIAMVVYLL 302
+ ++ + + L
Sbjct: 123 AACALGIVGVGLLAL 137
>gi|257868559|ref|ZP_05648212.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|257802723|gb|EEV31545.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
Length = 307
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 86/295 (29%), Gaps = 17/295 (5%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
W T + T+ L S ++ R + L + +
Sbjct: 12 ALITVFFWSTTFIATKLLLIDFSPTAILFLRFIIGLVALSVL-------SKFSRIHYHFR 64
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + ++ + + ++ AL + ++P+ ++ + +L
Sbjct: 65 QHLYLMAAGISGVCFYFFLENIALSYTSTSNVAVIVSISPLFIGLASALIYRTKLKGTFF 124
Query: 149 IAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGFFIE 199
I LL + +++ + + + +S + + +
Sbjct: 125 IGFLLSFCGIFLISFAGNLSFHPFGDFLAIAAALMWMVYSLLVKKIASWGHSVIDTTKMI 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + S L L ++ F +++Y +++
Sbjct: 185 FLYGILFIMPLFFLTKSSLSLDKLLQTDNLLYLLFLGLGASALCFVLWNYTVEQLGAVMA 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G+ Y P+ + +S IL + I V+ + + + + V + + K
Sbjct: 245 GLYIYLVPVTTLFASFLILGEGISLVKLLGVTLTLFGLFVSEGKSSLPIRARLKK 299
>gi|269792016|ref|YP_003316920.1| hypothetical protein Taci_0401 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269099651|gb|ACZ18638.1| protein of unknown function DUF6 transmembrane [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 300
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 80/288 (27%), Gaps = 6/288 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
++K + ++ + A WG+ + L+ + V+ R L + +
Sbjct: 1 MNKGISRRAVLLADGAILMAAAFWGVGFAVLKDTLDYLPPFTVLVVRFLIGGLMLGLVFL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
GLS + + + + V+ IS
Sbjct: 61 RHFRGLSRTSLKDGLITGILLFCAFSLQTVGLMWTTAGKQAFLTATYVVLAPLVSWGISR 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + + + + ++ + L A R T
Sbjct: 121 VFPGLRAMVA-SLTCLTGIWALSSADAVVLNRGDVMTLMSAFFYACHLIAVDRFTKRTDP 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++M VL + +L + + S + L F I + K
Sbjct: 180 VALAAMQMVVLGLISLPFAAFEAPSF----HMPLRGWMSLLYMILFSTVGAFTIQNVAQK 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ ++ T + VS V IL + + +V+ A+++
Sbjct: 236 YTSPTHAALLLSTEAVFGAVSGVMILGERFTLQMVLGGSLVMFAILLV 283
>gi|118590234|ref|ZP_01547637.1| hypothetical protein SIAM614_11988 [Stappia aggregata IAM 12614]
gi|118437206|gb|EAV43844.1| hypothetical protein SIAM614_11988 [Stappia aggregata IAM 12614]
Length = 293
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 89/277 (32%), Gaps = 7/277 (2%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAI 71
G + + G + + + + L S L+++ R + +LP
Sbjct: 2 GTAMAESRNRVTAGIGMMCAGVVCLCLNDAIAKTLTADYSPLQILFLRNIIALPIATVIA 61
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ G +L+ G L A L L + F+ PV
Sbjct: 62 LKMGGRSALISHRPAAHLLRGGLWICAATLF------FTGLSLLGLAEATALVFIMPVFV 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ ++FL+E++ + A L+ + +L++ + ++ +A +A +
Sbjct: 116 TTISALFLREQVGWRRWTAVLIGFVGVLVVVRPGTGAFQAASLLPIATALFYAALMLSAR 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ ++ + + + + + D +G L + + +
Sbjct: 176 LVDPRESVWTLMLYLSGAGALMSALAMPFVWVQPRAEDIWLFLGIALFGTVGITLMTQAF 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ A + V +YTA L + + + D +
Sbjct: 236 RLAPAAVVAPFDYTALLWATLLGWLLWDEIPDLATYV 272
>gi|67458453|ref|YP_246077.1| S-adenosylmethionine transporter [Rickettsia felis URRWXCal2]
gi|75537077|sp|Q4UNE6|SAM_RICFE RecName: Full=S-adenosylmethionine uptake transporter
gi|67003986|gb|AAY60912.1| S-adenosylmethionine transporter [Rickettsia felis URRWXCal2]
Length = 294
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 87/297 (29%), Gaps = 8/297 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + + +++L + EV R +S + + Y
Sbjct: 1 MNDALKTYLTGIGWFLLSLVSSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVFYH 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + +L + Y L + F P+ ++ L
Sbjct: 61 GKN-------TLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E + + + ++ + L++ + +A FA I
Sbjct: 114 AVFFLNENIIWQRWVVTVVGFIGLVVTLKPHTEDFNPEILYFVLAAISFAMLDIINKKFV 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ V + +++ + + L G S +
Sbjct: 174 IKESMISMLFYSAIVTAVVSLPVASQYWLTPSGFELALLFVLGSSGSLILFFLLKAFSMV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y ++ +++ FI + D I++ A + + +
Sbjct: 234 DATATAPYRYLELVISAIAAYFIFSEFPDKSTLHGAVIIIPATLFIIYSEKKAMSRK 290
>gi|325972005|ref|YP_004248196.1| hypothetical protein SpiBuddy_2183 [Spirochaeta sp. Buddy]
gi|324027243|gb|ADY14002.1| protein of unknown function DUF6 transmembrane [Spirochaeta sp.
Buddy]
Length = 308
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 91/298 (30%), Gaps = 3/298 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
K+++ + F +LW ++T+ + + + R + + +
Sbjct: 4 KQSSDTSNNSALILAFLTVMLWSTGFVFTRIAVRDIGPFPLGLLRYGSAAVILVVIGLVK 63
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GL LKD + F + + T + S+
Sbjct: 64 RIGLPTLKDVPLFLVLGALGFFF-YQIFFNVAMTTITAATASVVTATVPVLTAFFASLLF 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ + A +++L+L + G L + IA A +
Sbjct: 123 REKLGNLGWIAVCLEFAGILVLTLWQREVSIGWGLAWMIIAALCFAGYNLIQRFATKRYT 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + A ++++ + E L ++ F +++ + A
Sbjct: 183 PVQSTVYTIVASAFMFLLFLPQAIEEVRTAPVQSLLAVLFMGIFPSAIGFLLWTKALSIA 242
Query: 255 K-LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
K + V + PLL + + ++ DT I +++ + ++ + ++
Sbjct: 243 KQIGDVTNFMFVTPLLSTLLEIILIGDIPDTGTIIGGLMILFGVALFNNRARLVPRQH 300
>gi|283783460|ref|YP_003374214.1| hypothetical protein HMPREF0424_1007 [Gardnerella vaginalis 409-05]
gi|298252541|ref|ZP_06976335.1| permease of the drug/metabolite transporter (DMT) superfamily
[Gardnerella vaginalis 5-1]
gi|283441755|gb|ADB14221.1| putative membrane protein [Gardnerella vaginalis 409-05]
gi|297532905|gb|EFH71789.1| permease of the drug/metabolite transporter (DMT) superfamily
[Gardnerella vaginalis 5-1]
Length = 335
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/287 (7%), Positives = 72/287 (25%), Gaps = 4/287 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +WG + + +++ LE V ++ R++ + + K +
Sbjct: 32 IMLLICAAIWGGSYVSSKYALEVFPVQWLMGVRMVGACTIMAVIFFGTLRKTFTKKLIVP 91
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + V L +
Sbjct: 92 SLLTGITYYATLILQTEGLRSIDPGRSAFLTAAYCVITPFSAWLIVKKKPTLLGLVAAVM 151
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ + L ++ L + A+ + +
Sbjct: 152 CVAGVGFVALKPGMLVLTLSYGDFLTLLCAAIFAFNLTFLAYYSRKYNPVTLTFGQFVVS 211
Query: 207 ALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V + ++ + +Y + + ++
Sbjct: 212 GVLFVAGALICEPLPNFNAADHFSIFANMFYLTVVVTVVAQIMQNYSLVNLSTANASVIM 271
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T L ++ S + + + + + F ++ A++ L K
Sbjct: 272 CTESLFTLLFSTVLFHEHVSNMAFVGFALIFAAIITASLGEHYCDKK 318
>gi|238910191|ref|ZP_04654028.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
Length = 315
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ + +S + R+L++ G+ F G
Sbjct: 18 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVTFSFMHGD 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +LVFS F+ + + F++P I V ++
Sbjct: 76 KIFSILKNRKDALSLLVFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R L + A L ++ ++ H L IA ++A + +
Sbjct: 136 RRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSDALFWGIASAFAAAFYTTWPSRLI 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + ++ G HF + F + S F ++ G
Sbjct: 196 AQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGA 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + S+ +L + +++ ++++ L + +
Sbjct: 256 QLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRAR 313
>gi|228987742|ref|ZP_04147853.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228772016|gb|EEM20471.1| Transporter, EamA [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 299
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 93/294 (31%), Gaps = 12/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + GL + K+ +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKGLYIEKNEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + +AV+ F L T + +TPV++ L L E L
Sbjct: 65 KGVLLI-----GVIGVAVNQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFLITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ ++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLAWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQKV 293
>gi|169794414|ref|YP_001712207.1| hypothetical protein ABAYE0219 [Acinetobacter baumannii AYE]
gi|213159011|ref|YP_002321008.1| permease [Acinetobacter baumannii AB0057]
gi|215482003|ref|YP_002324185.1| hypothetical protein ABBFA_000245 [Acinetobacter baumannii
AB307-0294]
gi|301347615|ref|ZP_07228356.1| hypothetical protein AbauAB0_15240 [Acinetobacter baumannii AB056]
gi|332856038|ref|ZP_08436119.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332868880|ref|ZP_08438459.1| putative membrane protein [Acinetobacter baumannii 6013113]
gi|169147341|emb|CAM85202.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
gi|213058171|gb|ACJ43073.1| permease [Acinetobacter baumannii AB0057]
gi|213987478|gb|ACJ57777.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332727187|gb|EGJ58641.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332733072|gb|EGJ64272.1| putative membrane protein [Acinetobacter baumannii 6013113]
Length = 295
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLLK----DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + A + I ++ + I + + ++F
Sbjct: 62 KIAFISSTPSKLSVFAQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 122 GRFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLVNLHSITFNSDIILGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 288
>gi|254248475|ref|ZP_04941795.1| hypothetical protein BCPG_03306 [Burkholderia cenocepacia PC184]
gi|124874976|gb|EAY64966.1| hypothetical protein BCPG_03306 [Burkholderia cenocepacia PC184]
Length = 309
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 84/284 (29%), Gaps = 20/284 (7%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
+ WG T + + L + R + + GGL L +
Sbjct: 24 LVALFWGGTFIAGRILAATMSATSAATGRFAIAALLLVVLTWQVEGGLPTLSG----RQI 79
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
V AT + ++ F AL T+ + PV + L SV ++ERL+ +
Sbjct: 80 VTTFGLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSVVVRERLSLSRWAG 139
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-------------- 196
+ + LI+ + + T+ A + +
Sbjct: 140 IAVALCGALIVISRGDWLRVLTDLGNTFGAGERFMLCAVLSWAAYTVIGRRALDGLSPLA 199
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L + L L + F +S GI+
Sbjct: 200 ATTYAALWGLALLLVTHLFDATATGGTPLTWQAVASMLYLGAVGTVIAFVWYSQGIRLLG 259
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ SV +L +P+ +V+ + +
Sbjct: 260 PARAAVFTNLVPVFGVLLSVVLLGEPLSPSMLAGGALVIAGVAL 303
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 31/131 (23%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + F I + AI AL VV G L
Sbjct: 24 LVALFWGGTFIAGRILAATMSATSAATGRFAIAALLLVVLTWQVEGGLPTLSGRQIVTTF 83
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F + R + P+ V ++++ + R +
Sbjct: 84 GLGATGIFLYNVCFFAALARMPAGRTALFVALNPVATAVLLSVVVRERLSLSRWAGIAVA 143
Query: 294 VIAMVVYLLPT 304
+ ++ +
Sbjct: 144 LCGALIVISRG 154
>gi|300926226|ref|ZP_07142031.1| integral membrane protein DUF6 [Escherichia coli MS 182-1]
gi|300417761|gb|EFK01072.1| integral membrane protein DUF6 [Escherichia coli MS 182-1]
Length = 324
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 42 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 94
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 95 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 154
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 155 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 214
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 215 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 274
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 275 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 312
>gi|290974444|ref|XP_002669955.1| predicted protein [Naegleria gruberi]
gi|284083509|gb|EFC37211.1| predicted protein [Naegleria gruberi]
Length = 552
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/255 (10%), Positives = 72/255 (28%), Gaps = 10/255 (3%)
Query: 60 VLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFL 119
+ P + + F + N + G+ ++ G I
Sbjct: 260 FALTTPFILAFLTVFVYN-RWFIRDVNNKEKFGLKAGLTMVVTFVGGAIIIIGSIVPKSE 318
Query: 120 TSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS 179
+ + + + + + E + ++ I+S + + +++ +
Sbjct: 319 NVSLPWYSFIFTYQIDFNSISENITLWDLLGIASSIISSVCLVW--------YMLSLRYM 370
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
++ + E FI + L +F +
Sbjct: 371 KQEESQGNAVSVTGESLFILQLFILALTFVVPSLIVDDWTLWTRLNTKDWIMFFGFTIFV 430
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI-DTVRTIVFGIVVIAMV 298
+ + I + VG M + I S+ IL++ + + + IV+ ++
Sbjct: 431 YMMANHLNIFAISMLGSTRVGSMLALRLISTIFFSILILQESLKSIWQLLGCIIVLASVS 490
Query: 299 VYLLPTVINSGKNKT 313
++ K+ T
Sbjct: 491 YFMYSESQQEKKSAT 505
>gi|237725378|ref|ZP_04555859.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229436065|gb|EEO46142.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 302
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 87/285 (30%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG T + T+ L +S ++ +R + ++
Sbjct: 12 LMAIITVAIWGTTFVSTKILIQHGLSPSDIFFYRFTLAYLCMWCISY-------KKLFAN 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ +++ AL S +PV++ L +F ++
Sbjct: 65 RIKDELLLLLAGLCGGTIYFITENTALGITLASNVSLIVCTSPVLTTLLSYLFRRKEPFT 124
Query: 146 LQII-AALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
++ +++ ++ + ++ + L + + +
Sbjct: 125 RHLVYGSIMALIGVGLVVFNGSFILKINPLGDILSLTAALMWAFYCLILKQLDNHYSIVF 184
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L ++ + + I L + + F ++ +K
Sbjct: 185 ITRKVFFYGVLTILPMFLFRPLNWDNVLMMQPIVFGNLLFLGFVASMLCFIAWNACVKEL 244
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S I+ + I + +++ + +
Sbjct: 245 GAVKSTNYIYIVPLVTLLTSAVIINEKITWIALTGCFLILCGVYL 289
>gi|183219650|ref|YP_001837646.1| hypothetical protein LEPBI_I0225 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909788|ref|YP_001961343.1| Drug/metabolite transporter (DMT) family permease [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167774464|gb|ABZ92765.1| Drug/metabolite transporter (DMT) family permease [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778072|gb|ABZ96370.1| Conserved hypothetical protein; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 298
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 90/281 (32%), Gaps = 7/281 (2%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A + WGI+ + + V V ++ R L++ + ++ + L
Sbjct: 6 LLLLILAMVSWGISWPIAKVIAGMVPVPVLVFWRFLFTFLSIIPLLLVMRITIRLKTGKD 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+G ++++ G +T+ + VT I + + +R
Sbjct: 66 YWNVLIGGIIYTLYNQFFFLGLKNGLPGAGGVLVTTLNPIVTFFIVFLIQKKSISKRQVL 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ ++ L + + LLS + ++ +A ++ + +
Sbjct: 126 GLFFGFIGGLVILQVWKISLDYLLLSGNLFFLLCSFVWATLSLNSQKTGKSMSPITYSFY 185
Query: 206 PALF------YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
WN S + + G + +F ++ Y R
Sbjct: 186 VYGIGSILELLFCWNDPSFWKVWEFGPSFWFAIFYLTVISTTFGTTVYFYAATRLGSEIA 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ PL +SS IL + I I G+ ++A+ +
Sbjct: 246 SSFIFIVPLSAYLSSFLILDEVIQVPVIIGGGLAMLAVYLI 286
>gi|254239043|ref|ZP_04932366.1| hypothetical protein PACG_05220 [Pseudomonas aeruginosa C3719]
gi|126170974|gb|EAZ56485.1| hypothetical protein PACG_05220 [Pseudomonas aeruginosa C3719]
Length = 296
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 93/296 (31%), Gaps = 13/296 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +W + + + E+ R W L G+ L + L
Sbjct: 3 YLFPLLAVFIWAGNTVVNKLAVGVIQPAEIGFFR--WLLVGLALTPFMLGPVLRNRRYIL 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
N +L +AV+ YA + P+IS+ L S L RLN
Sbjct: 61 ANLGKFVVLGLLG--MAVYQSLAYYAAALTSATNMGIILSLMPLISLGLASSILAHRLNA 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ AL+ + ++++ G+ L + V AY + S +
Sbjct: 119 GALLGALVSLAGVVLVISQGHLGALLEHGVNLGDAMMIVATLAYAVYSVLLKKWSLKLPA 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ L + + + L L L + + +G+ R S
Sbjct: 179 MQLLYLQVLVAILALLPLYLLSPRTGLNAANLPLVLYAALFASIVAALAWMHGVARLGPS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + P++ + +L + + + + + +++ +
Sbjct: 239 RMALFFNLLPIITACIATLVLGERLTVHHLVGGALTLAGVLLAEFWQRRPARLRSA 294
>gi|195111974|ref|XP_002000551.1| GI10287 [Drosophila mojavensis]
gi|193917145|gb|EDW16012.1| GI10287 [Drosophila mojavensis]
Length = 348
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 90/295 (30%), Gaps = 16/295 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + + L V+ +E+ S R + L ++Y + +
Sbjct: 36 LGIILATLSSLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPTIPILIYTKQ--PVFPEG 93
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + + ++ + F L + S FV FL +
Sbjct: 94 KRVILLLRCFMGTTGLMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCTLFNVL 153
Query: 145 HLQIIAALLIILSLLIMTLHSGIP--------------LLSLAIAVTWSAYCFARKTIPV 190
+ + +++++ + P +A + +
Sbjct: 154 TINMTLLGVVLITRPPLVFGEATPDLDSEKYSDKTYDIWGPVAAISSTLFGANVYILLRA 213
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ F + M AL Y + + G + D ++ G+ + + +
Sbjct: 214 LKNLHFSVIMTNFGAIALVYTLIVCGAIGAVCWPSCGRDRWLVVVLGIFSFLGQILLTLS 273
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ + V I + + + + + +VV ++++ +
Sbjct: 274 LQVEQAGPVAIARCADIVFAFIWQILFFGEAPNGYSLCGALMVVSSVILTAMKKW 328
>gi|126727019|ref|ZP_01742857.1| hypothetical protein RB2150_18067 [Rhodobacterales bacterium
HTCC2150]
gi|126703691|gb|EBA02786.1| hypothetical protein RB2150_18067 [Rhodobacterales bacterium
HTCC2150]
Length = 309
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 98/305 (32%), Gaps = 11/305 (3%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA 70
S S A + G FVF A +LW L + +E SV +++ +R ++F
Sbjct: 2 SPNTSSGPAEISHRRGLFFVFAAGVLWSTVGLGIRLIEDASVWQILLYRSFALSTFLYFV 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
I SG + A + L + IY++ + P +
Sbjct: 62 IRIRSGESPFSQVHRAGMPAAI----AGLALVAAYSGGIYSIQVISVASALLLFATAPFM 117
Query: 131 SVFLGSVFLKERLNHLQIIAALLIIL-------SLLIMTLHSGIPLLSLAIAVTWSAYCF 183
+ LG + L+ER+ +A ++ I+ + +G LA + +
Sbjct: 118 TAILGWIILQERVRPATWMAIVVAIVAIAIMVSGQTSASTQNGQLGGILAALGSALGFSV 177
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ G S + + + A+ G L + + +
Sbjct: 178 FTVALRWGKSGEMLPSVFLSGLFAIIITSSLCLYLGMSLVLSPLDAGIAMGMGVFQVGAG 237
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+++ G + + + ++ LL V L + I I++ A+ L
Sbjct: 238 LVLYTLGSRTLPAAELALLSLAEVLLGPVWVWLFLGEDASVRTLIGGAILLAAIAGNALS 297
Query: 304 TVINS 308
+
Sbjct: 298 GIRRR 302
>gi|186476274|ref|YP_001857744.1| hypothetical protein Bphy_1516 [Burkholderia phymatum STM815]
gi|184192733|gb|ACC70698.1| protein of unknown function DUF6 transmembrane [Burkholderia
phymatum STM815]
Length = 306
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 86/276 (31%), Gaps = 3/276 (1%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y++WG T L L L + R ++ G+F + L +
Sbjct: 29 YLVWGSTYLAVHVALGSFPPLLMSGLRNFFAGVGLFVFAMRRKPVWPPLTEIRNAGLVGT 88
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
MLV ++ + + + + + VI+ G + + + A
Sbjct: 89 MLVGLSSGMLAYGMRTVG--TGTAAVMVATVPLFATVIAAIAGRKIARGEWFAVGLGLAG 146
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ ILS T S L++ + A + S+ F + + +
Sbjct: 147 IAILSHGDQTQGSAGGSLAILCGALFWAGGAHLASRLKLPSDLFLSTSLQIGLGGAMSTM 206
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
SG + +P FL + + + + I+ Y P++ +
Sbjct: 207 VAWVSGERMMEMHFLPMLAFLYLMLIGTMAAYVAYGFLIRHTSPIIASSCMYVNPVVAVA 266
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+L +P+ I G+++ ++ +
Sbjct: 267 LGALLLGEPVTRSTVIATGVILTSVGLSFWFDYRRR 302
>gi|54298346|ref|YP_124715.1| hypothetical protein lpp2405 [Legionella pneumophila str. Paris]
gi|53752131|emb|CAH13558.1| hypothetical protein lpp2405 [Legionella pneumophila str. Paris]
Length = 352
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 74/277 (26%), Gaps = 6/277 (2%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A IL+G + + + L +S + + L S G+ + G +
Sbjct: 11 IVIALLAAILFGASTPFAKQLLGGISPVLLAGLLYLGSGIGLLLFRLIKDKGWQASRLFN 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + L S + V++ L VF KE +
Sbjct: 71 NEWI--WLIGAIGFGGILGPVLLMLGLEHTSAATASLLLNLEAVLTALLAWVFFKESTDR 128
Query: 146 LQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I LLI+ +++ + S + +
Sbjct: 129 RIIFGMLLIVAGGILLAWPNQLGQQHWAGTITIALACLCWAIDNNLTRRISTADALFIAS 188
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ G + L+ +F ++ + G
Sbjct: 189 SKGLVAGMTNVSLAFILHLPLPGWTQVSYALLIGFFGYGISLVLFVLALRDLGTARTGAY 248
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
TAP + ++ + + I ++ + + +
Sbjct: 249 FSTAPFIGAAIAILLFGSTTSILFWIAAILIAMGVWI 285
Score = 43.4 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 26/85 (30%)
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ L N + G + G++ +T ++ +L + +
Sbjct: 63 WQASRLFNNEWIWLIGAIGFGGILGPVLLMLGLEHTSAATASLLLNLEAVLTALLAWVFF 122
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLP 303
K+ D ++V ++ P
Sbjct: 123 KESTDRRIIFGMLLIVAGGILLAWP 147
>gi|325965232|ref|YP_004243138.1| permease, DMT superfamily [Arthrobacter phenanthrenivorans Sphe3]
gi|323471319|gb|ADX75004.1| putative permease, DMT superfamily [Arthrobacter phenanthrenivorans
Sphe3]
Length = 346
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 23/299 (7%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFF-AIVYFSGGLSLLK 82
G + ++G++ + + L + ++ R+ + + AI G L+
Sbjct: 23 GLGIALFSSAVFGLSGSFAKALLETGWTPGAAVTARLTGAALILAVPAIPALKGRWHQLR 82
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D G++ +A L + A+ + ++ PVI V +++
Sbjct: 83 DNWLTILLFGLVGVAACQLF-----YFNAVARLSVGVALLLEYLAPVIIVLWLWAASRKQ 137
Query: 143 LNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L LL I L+++ +G + +L A A F S
Sbjct: 138 PRALTFGGTLLSIAGLVLVLDLTGAVKIDVVGVLWGVAAAVCLAMYFFITAKENDSLPPI 197
Query: 197 FIE---------MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + LA + + L +
Sbjct: 198 VLASGGLLVGAAVMWLAAATGLAPMAFSTADTALGPWVTPWWVSLAGLVVLATVLAYVSG 257
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + T L ++ + +L + ++ + ++V +++ L +
Sbjct: 258 IMAARALGSKVASFVSLTEVLFAVIWAWLLLGELPGAIQLLGGVLIVGGVILVRLDELR 316
>gi|303229025|ref|ZP_07315833.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516303|gb|EFL58237.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a]
Length = 300
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 102/292 (34%), Gaps = 11/292 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G + LWG++ QF+ +++ +++ R L + + + G ++
Sbjct: 6 IIGIILTLLGATLWGVSGTSVQFVGNFRHMNLEWLLTMR-LITAGLLTVLYGWIRQGNAV 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+G+++F +A+ + +++ + + ++ P + + V
Sbjct: 65 FNVFRNWRDTLGLVIFGVFGMALCQYTYFRSIVIAGAGIATVLQYLAPSMIIIYLLVRYG 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+R + +II+ +L + + + ++G S V + A S +
Sbjct: 125 KRPSTGEIISVILALAGTICLMGNNGFSFESFRSDVLFWGLLSAVGVAVYSVSPVRLLAT 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS-------YGIKR 253
F ++ +GF F + T + + VF G+KR
Sbjct: 185 YGTIPIVGFGMLLSGFVAAVLFQQPHSYVTWDVWTVVGCFNVVFLGTIVSFNAYLEGVKR 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ I+ P+ +L + V + +++ +++ L
Sbjct: 245 IGAVSGSILSSIEPISAAFFGWALLGNQFNWVGILGMAMIIATVIIIALEKR 296
>gi|291298481|ref|YP_003509759.1| peptide methionine sulfoxide reductase [Stackebrandtia nassauensis
DSM 44728]
gi|290567701|gb|ADD40666.1| peptide methionine sulfoxide reductase [Stackebrandtia nassauensis
DSM 44728]
Length = 519
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/307 (15%), Positives = 97/307 (31%), Gaps = 13/307 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S PT++ L +F +I WG T L QF +E + L + R L + +F +
Sbjct: 1 MSSPTVLPWLALFTVWIFWGSTYLGIQFAVETIPPLLMAGFRYLLAGAVMFAIV---GPR 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + M++ + +L G + L + PV + + +
Sbjct: 58 HARGPNRPTPRQWRSMVIVAVLLLVGGNGLLSVGETSIDSGLAALIVATVPVWMLLIDAA 117
Query: 138 FLKERLNHLQIIAALLIILSL---------LIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ R+ IA L + + + + L+ + + Y
Sbjct: 118 VNRSRITVTMAIALALGTAGVGVLVGGPGSRVDLFGAIVVLIGALSWASGTVYARRAPQP 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + L V F E + F + F +
Sbjct: 178 KHPLVVASLQMIAGGVVLILVAAVTGEFGRLELAAISARSIAGFGWLVVAGSMLAFTAYG 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y STV Y P++ +V V + + + + GI+V A+V+ +
Sbjct: 238 YANANLPTSTVATYAYVNPVVAVVLGVLLGDESLSANLLLGGGIIVSAVVLIVGGQAAKR 297
Query: 309 GKNKTKK 315
+ +
Sbjct: 298 REKPRPR 304
>gi|257865318|ref|ZP_05644971.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257871648|ref|ZP_05651301.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257799252|gb|EEV28304.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257805812|gb|EEV34634.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 293
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 87/288 (30%), Gaps = 12/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G ++ A LW ++ + Q L +S ++S R++ S G +
Sbjct: 1 MKKTVGIVYACSAAALWAVSGIAGQILFTKYSISANWLVSTRLVLS--GCLLLSIGLKDR 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + + +L+FS + + + + + + P + +
Sbjct: 59 ARLISPFREKKDFIQLLLFSFLGMFLVQFTYFKTIEQSNASFATIIQYTGPFFVLLYAVI 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
++ + L+ +L + + L A S ++ + +
Sbjct: 119 AKRQFPSLKTCFWLLVTLLGVTAVASKGQIEQLATSQSALGWGGASAISLAFYSIQPRKL 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + + L L+ + + IF
Sbjct: 179 LQKYGSLPVVGWGMLIGGGLANVVHPMWQIDSQLNVQVILYLLVVILFGTALAYLIFLTS 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ + ++ PLL S+ + V + F V+ +++
Sbjct: 239 LRYLSSTLATVLTAVEPLLAAFLSIIVFHDHFAVVELVGFMAVIGSIM 286
>gi|258404486|ref|YP_003197228.1| hypothetical protein Dret_0348 [Desulfohalobium retbaense DSM 5692]
gi|257796713|gb|ACV67650.1| protein of unknown function DUF6 transmembrane [Desulfohalobium
retbaense DSM 5692]
Length = 299
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 85/279 (30%), Gaps = 14/279 (5%)
Query: 35 ILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
WG++ L E + V +R L V + L K+P+
Sbjct: 14 FCWGLSGGIGGVLMAEGWDPVVVSFYRGAIGLLFVCGWLALRPMQSGL-----KSPRLWS 68
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +A ++ F+ ++ + + + PV + E+ + A
Sbjct: 69 WSAIAGLGVAGNFAFYFVSISEGSVAVAATLMYCAPVFVYLVSFALKLEKPTLPKWAAIG 128
Query: 153 LIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L+++ ++++T + + + S F + +
Sbjct: 129 LVMIGVVLLTRVYDVGAGSVTLVGIGAGLLSGLSYAVFIFGFKYAAPHGSPQAILVIAFA 188
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ W G + L F + L F + G+ S I+
Sbjct: 189 ALAAILFWLGDAEQTVAVLSTPSWPWFAVLGVLGAGLSFLFYIVGLHHTAPSVASIVAMV 248
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P+ + V +L + + + + ++++ + + +
Sbjct: 249 EPVTASLFGVVVLHENLAGPQILGMALILVTVTALSVYS 287
>gi|254515014|ref|ZP_05127075.1| transporter, drug/metabolite exporter family [gamma proteobacterium
NOR5-3]
gi|219677257|gb|EED33622.1| transporter, drug/metabolite exporter family [gamma proteobacterium
NOR5-3]
Length = 298
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/278 (9%), Positives = 77/278 (27%), Gaps = 1/278 (0%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + ++ + + Q+ + ++ R++ + + L L K
Sbjct: 13 AAIWGSSFMFMRIAVPQLGPVWLLEMRLVAASLILLIISRAMRRPLHLRKHWRHYVILGV 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + A + T+ + + + + + L ++ +
Sbjct: 73 FNTALPFWAFAYAAQTLPASMLAILNSTAPLWGLLIGFVWRGKPITRRAIVGLLLGMSGV 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
++ L + + + A Y A + A ++
Sbjct: 133 ASLVGLGGLAVQPEALFAVILTASAAVCYGIASSYAEYAEKVETYANAHGSLWAATLLLL 192
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
LI L + ++ + I A + + Y PL ++
Sbjct: 193 PFVPFAPVPVEWPAGAVAAALILGVLCTGVAYLLYFHLIATAGAPSALTVGYLIPLWGVL 252
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
L + + + G+V+ ++ + +
Sbjct: 253 WGWLFLDEAVGLHTLLGAGLVLSGTMLVTGFSPARMIR 290
>gi|88859449|ref|ZP_01134089.1| Predicted permease, DMT superfamily protein [Pseudoalteromonas
tunicata D2]
gi|88818466|gb|EAR28281.1| Predicted permease, DMT superfamily protein [Pseudoalteromonas
tunicata D2]
Length = 317
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/319 (8%), Positives = 94/319 (29%), Gaps = 21/319 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ K+ + L + WG + L +V L ++ R + +F
Sbjct: 1 MEKDMNRSASTNAVLLLLLCTFFWGACFPVGKHALGEVHALTLVIWRFAIAAVCLFIYAK 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + L + + S + L + ++P+ +
Sbjct: 61 WKNMPMPSLTA----KQWAWAIGVSIIGVGGLNLGLFTGLAHTDASNGALIMALSPLATS 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTL-------------HSGIPLLSLAIAVTWS 179
+GS+ ++ + + ++ + +L++ H + + +
Sbjct: 117 LIGSLLQRKLPTRSAVFSLVVCLSGVLLVLTNGELKRLLGFEFNHGDQMIFMGMLCWSLY 176
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF--LGNIPDTLFLIGYG 237
Y + + + M ++ + L
Sbjct: 177 TYLTQGVSRWMPMIPYTLVGMLSGLGVISLVTAFSAEVHPLQESLAISGYVLGDLLFIGV 236
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ ++ G+K+ + + P+ +++ F Q + +++ + IV+ +
Sbjct: 237 FGTVGGYLLWISGVKQLGAANASLFFNFVPVFAALTA-FAYGQTVTSLQLLGVAIVIAGL 295
Query: 298 VVYLLPTVINSGKNKTKKS 316
++ + ++ + S
Sbjct: 296 LLPRIVKWQQQRFSRQEAS 314
>gi|146276979|ref|YP_001167138.1| hypothetical protein Rsph17025_0931 [Rhodobacter sphaeroides ATCC
17025]
gi|145555220|gb|ABP69833.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17025]
Length = 294
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/299 (11%), Positives = 91/299 (30%), Gaps = 10/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + + + + + ++ + + +++ L+ P +
Sbjct: 1 MENLRGIVMMIVSMAGFAMEDMFVKLASAGMPTGQILLFLGLFGAPLFWALA------RR 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K L G +++ V F+ AL S TP++ F +VFL
Sbjct: 55 EGKAVLSREVLAGPILWRNLGEMVGTAGFVTALALTPLSSASAILQATPLVVTFGAAVFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
E++ + A + ++++ G L SL + ++
Sbjct: 115 GEKVGWRRWSAIAVGFAGVVVVIRPGLEGFELASLWAVLGVIGLAGRDLATRRVAASTST 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ A + V + G L+G + + ++S
Sbjct: 175 MQVGAWAFLTVAAVGGMMLAVGGGAVWPGPGQMGLLLGALCFGFVGYWTLILATRVGEVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ YT + ++ + + D +++ +Y + +++
Sbjct: 235 AIVPFRYTRLVFAMLIGFLVFHERPDAWMLAGAALII-GSGLYSFTREQRLRRLSLRQA 292
>gi|329770088|ref|ZP_08261483.1| hypothetical protein HMPREF0433_01247 [Gemella sanguinis M325]
gi|328837399|gb|EGF87029.1| hypothetical protein HMPREF0433_01247 [Gemella sanguinis M325]
Length = 299
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 93/293 (31%), Gaps = 11/293 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAI-----VYFSGGLSLL 81
+ + I+WG+ ++ +V L V+ R + ++ + + +Y S L
Sbjct: 8 VLLIIVTIVWGLAFIWQNIASKVLGPLTVVGIRSVIAVIFIILSAVLMPALYKSQDPKSL 67
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K + + +L V + F + F+G +
Sbjct: 68 AMKVSKKKEWILGIICGIVLFVSMYISQVGVGMTTAGKAGFITVLYICFVPFIGIFLGNK 127
Query: 142 RLNHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LN II +L ++ ++ I + + I+ F
Sbjct: 128 -LNKFFIIGLVLAVIGFYFISVKEEFSLEIGDIVVLISALLFGIHIIVIDYSAARVNSMF 186
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L + ++ +V+ F+ L L + + + G K
Sbjct: 187 LSIVQLVVVSILSLVFAVFTEKIILADILSVIWPLLAVGVLSSGVGYTLQIIGQKNVPPH 246
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T ++ ++ ++ V IL + + + IV +++ +P K
Sbjct: 247 TASLILSLESIVAVIGGVLILNEHVGIREGLGMLIVFAGIIISQVPDKKQIEK 299
>gi|324019671|gb|EGB88890.1| integral membrane protein DUF6 [Escherichia coli MS 117-3]
Length = 326
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 44 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 96
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 97 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 156
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 157 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYTRHPRVDLLSLTSWQM 216
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 217 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 276
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 277 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 314
>gi|284034775|ref|YP_003384706.1| hypothetical protein Kfla_6918 [Kribbella flavida DSM 17836]
gi|283814068|gb|ADB35907.1| protein of unknown function DUF6 transmembrane [Kribbella flavida
DSM 17836]
Length = 300
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 95/291 (32%), Gaps = 13/291 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYF 74
A+ + G + A +LWG L L ++ + V +R+L + +
Sbjct: 8 TAAPTSRNGITLLVLAGVLWGTGGLAGSILASSTGLTPVAVAEYRLLTGGALITGYALVT 67
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + P+A+ + +LA + A+ L + + V I +
Sbjct: 68 RR----LAGAPRGPEALFRIATVGLLLACFQAAYFAAVAATSVGLATLTTMVAVPILITA 123
Query: 135 GS-VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G+ + + R +I+ ++ + L+++ LA + +
Sbjct: 124 GTALLDRRRPARRAVISLVVALAGLVLLIGTPTAGAHRLAGTGLALLAAAGFAALSLDRR 183
Query: 194 EGF-----FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
E + + + ++ + G + L + + + +
Sbjct: 184 EALPGLDRISTIGLGFLAGGLLLLPVALTVGMSIPVQPAAIGAVLFLGLVPTAVAYGSYF 243
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G++ A I PL + + + ++ + + + +++++ +
Sbjct: 244 TGLRYAGPRAAIIAVLLEPLTATLLAALVQQEQLSGPQVLGALLILLSTTI 294
>gi|271961925|ref|YP_003336121.1| hypothetical protein Sros_0346 [Streptosporangium roseum DSM 43021]
gi|270505100|gb|ACZ83378.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 302
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 76/293 (25%), Gaps = 14/293 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
L +LW + + + S + R+L + + GL
Sbjct: 13 RRALLAAGITVVLWASAFVAIRSAAQYFSPGALALGRLLAGSVVLGVIWLARREGLPPRA 72
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L ++ + + V P++ LG L+E
Sbjct: 73 AWPG------ILGSGLLWFGLYMVVLNWGEQEVDAGTAAMVVNVGPMLIALLGGWLLREG 126
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGSSEG 195
+ + +++ + + +A A + + +
Sbjct: 127 FPPRLLAGMAVSFAGAVVVGISMSDGGRASIVGVLLCLLAAVTYAGGVVCQKPALKHASA 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + G E + + F ++Y + R
Sbjct: 187 LQVTTFGCFVGTAACLPFAGPLVTEIAAAPLPATLNVVYLGVFPTALAFTTWAYALARTT 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+G Y P L+++ + +L + + + + + V S
Sbjct: 247 AGKMGATTYVVPALVVLMAWAVLGEVPGWLTLAGGLLCLAGVAVSRGGARRAS 299
>gi|184156506|ref|YP_001844845.1| DMT family permease [Acinetobacter baumannii ACICU]
gi|183208100|gb|ACC55498.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Acinetobacter baumannii ACICU]
Length = 306
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 85/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + L
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFLSVWRQRRLVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + + Y F +
Sbjct: 128 FAVFGSVLSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKKWQLPLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVLFHLPLIFWFGLDALNAQNAPSAIYAGVFASLIAPLVWMLAVQQLGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + + L + T ++++ +++
Sbjct: 248 RTSIFMNLVPVFTAIIASIWLSEQWTIYHTFGGIMILVGIIM 289
>gi|222056200|ref|YP_002538562.1| protein of unknown function DUF6 transmembrane [Geobacter sp.
FRC-32]
gi|221565489|gb|ACM21461.1| protein of unknown function DUF6 transmembrane [Geobacter sp.
FRC-32]
Length = 347
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 83/295 (28%), Gaps = 4/295 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + IL+G++P+ + + Q+ + L S G+ ++ + +
Sbjct: 2 HKKGLYLAILSAILFGMSPVACKAIVGQMPPALLAGLLYLGSGLGLTGVVLRQKADVFHI 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+L + + + F Y + S V + L + E
Sbjct: 62 LGSLSWRQKAFLAGAILSGGVAAPLFLAYGIRYGTASEVSLLLNFETVATTLLAWLIFHE 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIPVGSSEGFFI 198
++ + I LII + ++M + ++ +
Sbjct: 122 QIGYRVWIGKALIIGASILMIFTGSKEVQLSIPGLSVLAACLLWGIDNNLTRELESIPAS 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + + T L L +F ++ +
Sbjct: 182 LLACMKGWSAGIFNVLLSLFFFTGPVTVFQVTGALAVGALSYGASLVLFVQALREIGAAR 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P + + SV +L + + +++ M + + +++
Sbjct: 242 TSTWFASGPFIGTILSVIVLGERPPGEYWVAALVMLSGMFLLFGERHGHVHRHER 296
>gi|163848611|ref|YP_001636655.1| hypothetical protein Caur_3067 [Chloroflexus aurantiacus J-10-fl]
gi|222526546|ref|YP_002571017.1| hypothetical protein Chy400_3313 [Chloroflexus sp. Y-400-fl]
gi|163669900|gb|ABY36266.1| protein of unknown function DUF6 transmembrane [Chloroflexus
aurantiacus J-10-fl]
gi|222450425|gb|ACM54691.1| protein of unknown function DUF6 transmembrane [Chloroflexus sp.
Y-400-fl]
Length = 297
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 81/279 (29%), Gaps = 14/279 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ V A + WG + +L + + L + R+L S P + +G
Sbjct: 8 QRPLDVAMVVIAALSWGTIGVAVGWLYRLTETNSLSIGFLRLLLSAPVLLITARLLAGQQ 67
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +F + P+ + L F
Sbjct: 68 AFRIQP---RHRWTLGLIGGAFAGYQVAYFAAIPYLGVAAAVLINICSAPIFTALLARAF 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------WSAYCFARKTIPV 190
L ERL +A ++ ++ + ++ + + +S +
Sbjct: 125 LGERLRPATWLAIGGAVVGAGLLVGGAPQVESTVDLLIGTALALTAGFSYSLVVLGARLI 184
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + ++ S G + + + + + ++ G
Sbjct: 185 AADYHPVVPVALSFTLGAILLLPAALSTGLVVDYPVQGWLVLIYLSIVPTAIAYALYVRG 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
++ + +T + PL + ++ +L + +
Sbjct: 245 MRSVRATTAATITLLEPLGSALLAILLLGERFTATGIVG 283
>gi|307244891|ref|ZP_07526989.1| hypothetical protein appser1_1040 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306854213|gb|EFM86420.1| hypothetical protein appser1_1040 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 282
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 78/277 (28%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V I +G + ++ ++ S ++ RV+ +L + ++ L L
Sbjct: 3 KHSLALLKVHFTAIFFGASGIFGALIKS-SPDTLVLGRVMIALVCISLYFIWKKQALVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ +A + + + SF FV + L
Sbjct: 62 TRRELFSQILSGVLLAAHWVTFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+IA + ++ + L L V + + +
Sbjct: 120 YREGFLLIAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGILAIVNRKNMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSAKGLLNASALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTLTMLIGGAIILLSVA 276
>gi|207738590|ref|YP_002256983.1| permeases of the drug/metabolite transporter (dmt) superfamily
protein [Ralstonia solanacearum IPO1609]
gi|206591958|emb|CAQ58864.1| permeases of the drug/metabolite transporter (dmt) superfamily
protein [Ralstonia solanacearum IPO1609]
Length = 295
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 92/297 (30%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++W + ++ V + +R L + + F +
Sbjct: 1 MLYPLLAVLVWAANTIISKAAAGVVDPAAISFYRWLIAAIVLTP----FWARPLWRQRRE 56
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V + L ++ YA + + P++ + + SV ++ +
Sbjct: 57 VLPWLPRLSVLALLGLVLYQCLSYYAAHSTSATNMGVICALIPMLGLIINSVVFRQPVGA 116
Query: 146 LQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + +L +L + L G+ + + + +AY +
Sbjct: 117 PAVAGVAVSLLGVLYLLGRGHPASLLDGGVNHGDVLVVIGSAAYALYNILYRRWAPPFGQ 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L ++ + + + L + + G+ R
Sbjct: 177 WMNLYLQALLAVVMLLPLALTAQSLAVPRQGIGMVLFAGIGASIVAMYWWMLGLARLGSE 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+M P+ V + +L + + I G++++ + + + G+N+ +
Sbjct: 237 RTVVMMNLLPVFTAVMASAMLGETVQGYHWIGGGLILLGVSLVQGIVTLPMGRNRLR 293
>gi|254451020|ref|ZP_05064457.1| transporter, dme family [Octadecabacter antarcticus 238]
gi|198265426|gb|EDY89696.1| transporter, dme family [Octadecabacter antarcticus 238]
Length = 313
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/308 (15%), Positives = 106/308 (34%), Gaps = 17/308 (5%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFA 70
+ +S E + M+G + + + + + + V ++ + R L + +
Sbjct: 4 QSISAETTTDRIMLGVALMIGFCLTAPLLDVAAKLASDIIPVGQITAARFLVQVGLMLPF 63
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ +G+L AT+L + FFI A+ F+ P I
Sbjct: 64 CLAMGLSFKF-------NGRLGLLTVRATLLMLSTFFFISAIRVMPLADALAIVFIEPFI 116
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ +G E + ++ AA + L ++++ S ++A+ +A CFA +
Sbjct: 117 VMLVGKYAFGEDVGPRRVAAAAVGFLGVVLVIQPSFATFGAVALYPLGTAVCFAGYVLVT 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGE---------HFFLGNIPDTLFLIGYGLLNS 241
G + + L + ++L+G G +
Sbjct: 177 RGLRGQLHPVMMQFHTGLIATLMCVPVVWIANGTGVAALDPVWPQGIYWIWLLGVGFFAT 236
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +YG+ A ST+ M+Y + V + + Q + V +++ A + +
Sbjct: 237 VSHMMMTYGLTLAPSSTLAPMQYLEIPVATVLGLLVFSQFPNAVALAGIVLIMGAGLYMI 296
Query: 302 LPTVINSG 309
+ S
Sbjct: 297 HRERVTSR 304
>gi|71083369|ref|YP_266088.1| integral membrane protein [Candidatus Pelagibacter ubique HTCC1062]
gi|71062482|gb|AAZ21485.1| Integral membrane protein with domain of unknown function DUF6
[Candidatus Pelagibacter ubique HTCC1062]
Length = 293
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 99/291 (34%), Gaps = 5/291 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G + VF L + E ++ +++ R L+ V ++
Sbjct: 5 NKIPGPILVFMGACCLSFGGLIVKSFEGSTLWQILFWRSLFFSLTVLLFLIITYKKKLFK 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ IL+ + +++A+ T+F + G +FLKE
Sbjct: 65 AFYDSGLP----GLIGGVILSFGFCGYVFAMYNTTVANTNFIISTQILFLAIFGYLFLKE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ + + + +L I +L+M +S P +S I + ++M
Sbjct: 121 TISSITLASIILAITGVLLMVGNSLSPGEMSGNLAAFSMPITFAVLIIIVRKFP-TVDMV 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A + GF E + + L F F + G + + VGI
Sbjct: 180 PAQFIAGVSSCFIGFLLSEKLMISSHDIFLGFTAGFFQVGFGFIFITMGARSTPSAMVGI 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + +L + + + I G+++ A+++ + ++ K K
Sbjct: 240 IMLSESVLGPMWAFLFAAERPSLFTLIGGGVILFAVLLQFYSLLFSNKKEK 290
>gi|148549844|ref|YP_001269946.1| hypothetical protein Pput_4642 [Pseudomonas putida F1]
gi|148513902|gb|ABQ80762.1| protein of unknown function DUF6, transmembrane [Pseudomonas putida
F1]
Length = 306
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 86/286 (30%), Gaps = 4/286 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G Y++WG T L+ + +E + + R L + G+ + + + G +
Sbjct: 11 LIGAFLAL--YLVWGSTYLFIRIGVESWPPMLMAGVRFLIAG-GLLYGFLRWRGVPAPTW 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ A+G L+ S V + T + + G K
Sbjct: 68 PQWRAAGAIGFLLLSCGNGGVTVAEHAGVASGVAALAVATVPLFTLLFGLLFGHRNSKLE 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +L+L S I + A A+ +
Sbjct: 128 WAGIALGLVGIGLLNLGSNLQASPIGAALIIFAAASWAFGSVWSKTLPLPQGPMASAAEM 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
LA A+ + + F + Y +K + +
Sbjct: 188 LAGGAVLLLGSVLSGERMTQLPTAAGWGALAYLVFFGSILAFSAYMYLLKHVRPAAATSY 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P + ++ + + I + +++ A+V+ LP +
Sbjct: 248 AYVNPAVAVLLGIVFAGEQIGAEECVAMAVIIGAVVLIGLPQWRKA 293
>gi|327313702|ref|YP_004329139.1| hypothetical protein HMPREF9137_1454 [Prevotella denticola F0289]
gi|326946239|gb|AEA22124.1| putative membrane protein [Prevotella denticola F0289]
Length = 307
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 101/287 (35%), Gaps = 5/287 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T+ G + + I +G PL++ + +S+ V+ +R + + +++
Sbjct: 3 HSSTIKGYGYATLSAITFGTIPLFSIPVMEAGMSLPSVLIYRFAFGCLSMMAVLLWRRQT 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + +L + + ++ + + + +I F +
Sbjct: 63 LHIRWGDGLRIMFLSLLYAVSAVCLFSSYEYMPGGVATTLLFSYPVWTEILLILFFHEKI 122
Query: 138 FLKERLNHLQIIAA--LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L+ L IA L + +L+++ + ++ Y + +
Sbjct: 123 TLRITLAVFLAIAGVFFLGGIGQTDGIKSVWGIVLAMSSGLLYAIYMVIFPHMRIRKLPA 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI-PDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + L V++ F+ G + + ++ + + +
Sbjct: 183 LKLNFYIFFMAMLLLVLYASFTAGGVQRIPDGASFLSLILLGLVPTTVSNVTLVRSLTLI 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++V I+ PL + + ++ +P+ T I F +++ ++++ +
Sbjct: 243 DSASVAILGAFEPLTAMAIGITLMGEPLTTAIVIGFMLIIASVLILI 289
>gi|261379758|ref|ZP_05984331.1| putative membrane protein [Neisseria subflava NJ9703]
gi|284797436|gb|EFC52783.1| putative membrane protein [Neisseria subflava NJ9703]
Length = 296
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 84/284 (29%), Gaps = 14/284 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G+ ++ A + + + L + S E++ R+L S +
Sbjct: 9 LGSAWMVIAALGFTVMNLSIKAASTQFGFSSGELVFWRMLVSTLFLGIMAKAQGNTF--- 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + I + Y+++ + + + LKE
Sbjct: 66 -----STPHWKTHLNRSVIGTLAMMCTFYSVMHLPLATGVTLNYTSSIWLAIFSFFILKE 120
Query: 142 RLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
R+ ++ + ++++ G +L + +A + S G
Sbjct: 121 RITLYTQAILVMGFIGVILLLNPSFQGGQEFAALVSLAGGAMSGWAYLQVRELSLLGEPG 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V + ++ +S + I +L G G+ + K K T
Sbjct: 181 WRVVFYLSLTGLIMGAVWSTITGWHPLTISSLPYLAGNGISAMIAQLAMTRAYKVGKKFT 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
V + Y + +S V + I + I+V V
Sbjct: 241 VASLSYLTVVFSALSGVLLFGDKITWQEAVGMVIIVAGGVFSSF 284
>gi|23466000|ref|NP_696603.1| hypothetical protein BL1444 [Bifidobacterium longum NCC2705]
gi|227547377|ref|ZP_03977426.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239621294|ref|ZP_04664325.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|322689332|ref|YP_004209066.1| hypothetical protein BLIF_1146 [Bifidobacterium longum subsp.
infantis 157F]
gi|322691344|ref|YP_004220914.1| hypothetical protein BLLJ_1155 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|23326718|gb|AAN25239.1| widely conserved hypothetical transmembrane protein with duf6
[Bifidobacterium longum NCC2705]
gi|227212192|gb|EEI80088.1| permease of the drug/metabolite transporter (DMT) superfamily
protein [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239515755|gb|EEQ55622.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|320456200|dbj|BAJ66822.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320460668|dbj|BAJ71288.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 311
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 83/290 (28%), Gaps = 16/290 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + LWG + L +F +E + ++ R++ + +
Sbjct: 25 LMLLGCAALWGGSYLLAKFAMEAIPPQWLMGLRMIGACLCMLAL-------FHKHIVPYL 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
PK + + L T + ++F V++ F + K R +
Sbjct: 78 TPKIIVPALVVGLTYWGTMVTQTIGLQTIEPGRSAFLTAAYCVLTPFATWIISKNRPKAI 137
Query: 147 QIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++A ++ ++ + ++L +G L +
Sbjct: 138 NLVAGVICLIGVGFVSLKPGGSLSLSAGDWLTIATAVIFSFNLTCLGVYTKRFDPIAVTF 197
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+A +L L + + + G+ S
Sbjct: 198 VQFGVAGVLFIIGALFTEPMPNASWLAPSVVASVLYLFLGATMSAQIMQNIGLAHVPASQ 257
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ T L + S + I + F ++ +A+++ ++ S
Sbjct: 258 ASIIMCTESLFAVTFSALFWGETIMWSSLVGFALIFVAVLMSVIKPTKQS 307
>gi|292654156|ref|YP_003534054.1| hypothetical protein HVO_A0617 [Haloferax volcanii DS2]
gi|291369861|gb|ADE02089.1| unknown protein [Haloferax volcanii DS2]
Length = 368
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 81/284 (28%), Gaps = 16/284 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV +LWG + + + L L+ + R + V +
Sbjct: 72 LFVLLG-LLWGSSFVAIEVGLAYFPPLQFAALRFFLAGLIVLGYAAVSTDYWR----PHS 126
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ V ++ H F G + + + PV++ + L +R++ L
Sbjct: 127 RTDWTLVGVSGGLLIGAHHAFLYLGQEHVPGAVAAIVISLGPVLTALFATGILGDRISPL 186
Query: 147 QIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ L + ++ G+ + +A A R +
Sbjct: 187 GVLGFGFGFLGVGLVARPDPSALLSSDVVGVATVLVASACFALGAVLTRPFSSDIPARTL 246
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ L + L + + F I+ +
Sbjct: 247 QAWAMLFGAALLSVAGVATGESLATIEWSGVAVGSLLYLAVVSGAGAFLIYFELLGCFGP 306
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + ++ Y P+ + S L Q ID V + F + +
Sbjct: 307 TQINLIGYLEPVSATLLSWAFLGQLIDAVTALGFVSIFAGFALI 350
>gi|229178103|ref|ZP_04305474.1| Transporter, EamA [Bacillus cereus 172560W]
gi|228605233|gb|EEK62683.1| Transporter, EamA [Bacillus cereus 172560W]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ ++ L +FL
Sbjct: 64 KQELKHSSL----AGLIVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIIMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|3970650|emb|CAA04271.1| hypothetical protein [Bacillus megaterium DSM 319]
Length = 296
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 83/291 (28%), Gaps = 13/291 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L V +WG++ Q+L + + ++ R+L S + S
Sbjct: 1 SRRAWGLLLVIIGATMWGVSGTVAQYLFQHKSFNAEWLVVVRMLVSGLLLLAIA---SKQ 57
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ + +L+F + + A+ + + +P+ + +V
Sbjct: 58 RNIFAIWKTKEERTSLLLFGVIGMLGVQYTYFAAIEAGNAATATVLQYTSPIFIIGYLAV 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-------PLLSLAIAVTWSAYCFARKTIPV 190
++ +++I+ +L+I + L I ++ + + +
Sbjct: 118 QARKWPVKVEMISVVLVIAGTFFLATSGNFNELSITGWALFWGIGAAVTSAFYTLQPKRL 177
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + L F +
Sbjct: 178 LAKWSSIEVVGWGMVIGGASFSFIHPPWHIAGEWSLLSLCAVLFVIIFGTLIAFYCYLES 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+K S ++ PL SV L + +++ + +
Sbjct: 238 LKHISASEAIVLASREPLSAAALSVLWLHVTFGWTEWLGTILIIATVFLLS 288
>gi|83949956|ref|ZP_00958689.1| hypothetical protein ISM_02640 [Roseovarius nubinhibens ISM]
gi|83837855|gb|EAP77151.1| hypothetical protein ISM_02640 [Roseovarius nubinhibens ISM]
Length = 290
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 88/283 (31%), Gaps = 9/283 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L + + +L+ ++T+ +E S EVI R +S I++ + +
Sbjct: 9 GLLLMLGSALLFSTAGIFTKAVE-ASGWEVIFWRAFFSAILTAAIILWRGRWQAEVTRMG 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ T + + Y TP+++ L V L+E
Sbjct: 68 RRGLLAAVIGACGTAAFLSAFK------LTGVANVALIYSATPLVAALLAWVLLREAPGM 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ A L I+ +L + S L + + + + M +A+
Sbjct: 122 TMLAGAALGIVGILAILAGSLGELSLIGDLLALVMALSLALLFVLYRAWPATPSMGPMAL 181
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + + + G + V KR G++ +
Sbjct: 182 SCVLLLPVAAWLSEPSQTPLGEIALMACFGLVFAAASVMM--FEAAKRMPSGQAGLISTS 239
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ + IL + I +V+ +++ LP
Sbjct: 240 ETPFAILLAWLILNEVPMLATLIGGALVMTGVLLGSLPGKRAQ 282
>gi|332528898|ref|ZP_08404868.1| hypothetical protein HGR_03267 [Hylemonella gracilis ATCC 19624]
gi|332041655|gb|EGI78011.1| hypothetical protein HGR_03267 [Hylemonella gracilis ATCC 19624]
Length = 321
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/300 (9%), Positives = 74/300 (24%), Gaps = 24/300 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+L + ++W I L ++ L LEV R +++ + + + G
Sbjct: 1 MTLTHRKAVWLMVAVTLMWSIAGLVSRQLTHAQGLEVTFWRSFFTVLTLLVILPLWQGVD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +NP S + + F++AL + + P+ + +
Sbjct: 61 VFRQIPWRNPSL----WLSGVCWGIMFTAFMFALTLTTVANVLITMALGPLFTALMSRFV 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L RL IA ++ ++ M + G
Sbjct: 117 LGHRLPLRTWIAIVVAGAGIVWMYGAQLNFSGEAGAGGQSGGLLLGSLIALIVPVAGSVQ 176
Query: 199 EM--------------------CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ + + + +
Sbjct: 177 WTVAQHQSRQQARDETAAKIGLVPSVLIGAILSALVTLPLTLPWQANATDLSWLGLLGVV 236
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + + K + ++ + I+ + + +V+ A+
Sbjct: 237 QLGIPCVLAVFCARVLKAPELALLGLLEVIFGILWAWLGAGEAPGANALTGGLVVIGALA 296
>gi|323699419|ref|ZP_08111331.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
ND132]
gi|323459351|gb|EGB15216.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans ND132]
Length = 301
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 79/291 (27%), Gaps = 16/291 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G F+ + L+ + + +E++ R + + +
Sbjct: 7 GMRFMLLGTFFFSFGSLFVKLAGSRLPTMEILFVRGVIGVFLCLIML--------RKSGA 58
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K +L + YA++ F PV L + + E L+
Sbjct: 59 GMLGKRKVLLAARGLLGFGAMFADFYAIVHLPLADALVLIFSHPVTVALLAWLLMGETLS 118
Query: 145 HLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ A L + + ++ + +A S + + + V
Sbjct: 119 KGGMFAILTSVAGVALVCRPDFLFGAGSPDLDTWGLLAALLSVFLTSWAILAVRVLAKTE 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+ P + + + + + + + L G GL + + G +
Sbjct: 179 RPAVVMLYPPIAISLLSPLFADGGWVVPTLAEWGVLCGVGLFMNVGQFFMTKGYAIESAA 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + L + D ++V ++ V
Sbjct: 239 RISGVSTLEIVFAATWGLMFLGEVPDWWTMGGGALIVFGVLALGRSGVREQ 289
>gi|297539519|ref|YP_003675288.1| hypothetical protein M301_2348 [Methylotenera sp. 301]
gi|297258866|gb|ADI30711.1| protein of unknown function DUF6 transmembrane [Methylotenera sp.
301]
Length = 291
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 84/288 (29%), Gaps = 3/288 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ +++ L +FC Y +WG T L +F +E + R + ++ + +
Sbjct: 2 SNKNQSLLIVLALFCTYFIWGSTYLAIRFGIESFPPFLMAGIRFAVAGSILYIVMRFLGA 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L +L + + + + + + S G
Sbjct: 62 PNPTKRQWLGATAIGILLPALGNGTVCYVQQTV--SSSVAALSIATAPIWMAIFSSIWGH 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + I +++L++ + L A ++
Sbjct: 120 HITHKEWLGIAIGLVGIVLLNVGGSLHGEFASAMLLIFAAACWSFGSVWSKHMDLPKGLM 179
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+LA +V + L L + + + Y +K +
Sbjct: 180 ASAAQMLAGGVALLIVSAFQGESWPQHISPKSWGAMLFLVVLGSIVTYSAYQYLLKTVRP 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ P++ ++ + + T I I+++ + + L +
Sbjct: 240 LVASSNTFVNPVVAFTVGIWFANEHVTTNEYIALAIILLGVFLVLSES 287
>gi|302878166|ref|YP_003846730.1| hypothetical protein Galf_0934 [Gallionella capsiferriformans ES-2]
gi|302580955|gb|ADL54966.1| protein of unknown function DUF6 transmembrane [Gallionella
capsiferriformans ES-2]
Length = 356
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 73/290 (25%), Gaps = 8/290 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
+ +E ++ G A +L+G + L S + + L S G++
Sbjct: 2 MKRETSNTFVQTGIYQALLAAVLFGAGTPLAKLLLAHTSPWLLAAMLYLGSGIGLWIV-- 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L + T + ++ L S V++
Sbjct: 60 --RRICRAPAVHLGAADWRWLAGAIVTGGMIGPVLLMFGLTGMPASGASLLLNAEGVLTA 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIP 189
L KE + + L I+ L+++ L + +
Sbjct: 118 LLAWFVFKENFDRRIALGMLAIVAGALVLSWPQEARFSGLWPALALLGACLAWAIDNNLT 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S + ++ + +F
Sbjct: 178 RKVSLSDASFIAMIKGVVAGASNLVLALLMHASLPDIGIIAGAALLGFASYGMSLTLFVI 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + G AP V ++ +L +PI ++V + +
Sbjct: 238 ALRHLGTARTGAYFSVAPFFGAVLAIVLLDEPITPQLIAASLLMVTGVWL 287
Score = 43.0 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 30/113 (26%)
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + + + + LG + +G+
Sbjct: 38 HTSPWLLAAMLYLGSGIGLWIVRRICRAPAVHLGAADWRWLAGAIVTGGMIGPVLLMFGL 97
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S ++ +L + + F+ K+ D + +V +V P
Sbjct: 98 TGMPASGASLLLNAEGVLTALLAWFVFKENFDRRIALGMLAIVAGALVLSWPQ 150
>gi|167851144|ref|ZP_02476652.1| RarD protein [Burkholderia pseudomallei B7210]
gi|167899776|ref|ZP_02487177.1| RarD protein [Burkholderia pseudomallei 7894]
Length = 297
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTGAGDDPQAARGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIIWTAPGALAVVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLARAFASRRLALSLAASAGVLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSALQWLALACAAAGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L +GG + + L G G +++ +
Sbjct: 181 ADSLALFSVE---MLALLPIAAAMLAAGGTSVAGRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLGEALSWQQLATYAPIWAAVALTAWHGFLIARR 297
>gi|89054039|ref|YP_509490.1| hypothetical protein Jann_1548 [Jannaschia sp. CCS1]
gi|88863588|gb|ABD54465.1| protein of unknown function DUF6 transmembrane [Jannaschia sp.
CCS1]
Length = 291
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/278 (11%), Positives = 90/278 (32%), Gaps = 7/278 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + + L S L+++ R + +LP ++ G +L T
Sbjct: 11 GLFMMTIGVAALSVNDAMAKALADAYSPLQILFLRNVIALPIALSFALHMQGKTALRSKT 70
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + V F ++ ++ F+ P++ V + ++FL E +
Sbjct: 71 P------VVHLLRGFFWVVATYLFFTSITHLGLAKSTALIFLAPLLIVAIAALFLGEHAD 124
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ L +I+ +A +A A + + +L
Sbjct: 125 WRRWCVVALGFFGAMIIIRPGMSGFDPIAWMPVAAALMAAFLMLSARMVDPHESFWTLLL 184
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + + + +G L + + + + A + + ++Y
Sbjct: 185 YLTGSSALISAIIVPFVWIPVQVTHLWLFLGVALFGTAGMVLMTQAFRIAPATLIAPLDY 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+A + + + ++ D + I ++V + ++ +
Sbjct: 245 SALVWASLFGWWFWQEIPDRLTYIGAAVIVASGLLNIF 282
>gi|291513899|emb|CBK63109.1| Predicted permease, DMT superfamily [Alistipes shahii WAL 8301]
Length = 292
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 92/291 (31%), Gaps = 5/291 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV--SVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ PL+T L V S EV+++R + + +
Sbjct: 1 MLRVKGILWAALSSSTFGLAPLFTLLLLGVGYSSFEVLTYRWGVASLCLGAYGLLAGCDF 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + L + + + ++ V I + + ++ F
Sbjct: 61 RLGRRELGTVFLLSLFRAATSLSLVIAYQNIASGVASTIHFMYPLVVAVVMMCFFRERGS 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS---SEG 195
+ I +++ + H L ++ V+ AY + +
Sbjct: 121 VWTFAAIGMSIVGAVLLSLGNVDFSHGDTTLGIVSATVSVVAYGGYIVGVRRSRAVEIDS 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ CV+A ALF++ +GG L + IK
Sbjct: 181 TVLTCCVMAFGALFFIAGGLLTGGVRLEADPHTWLYILGVAIPATAVSNMALVQAIKSIG 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ I PL +V V++ + ++V A+ V +L +
Sbjct: 241 PTLTSIFGAMEPLTAVVIGVWVFAELFTAKGAAGILLIVAAVSVVVLRSRK 291
>gi|254436793|ref|ZP_05050287.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
gi|198252239|gb|EDY76553.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
Length = 297
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/294 (13%), Positives = 89/294 (30%), Gaps = 10/294 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + A +L+ + ++L + ++V R V G +
Sbjct: 11 RIVIGLGSMALAVMLFTMIDTSAKWLVLAGLPAMQVAFLRYAIHFLLAVVVFVPREGLSA 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + V + L + AL +T+ F P++ L L
Sbjct: 71 FESYSPK------LQVLRSASLFIGTCLNFMALKYLPITVTTTIMFAGPILVTLLAIPML 124
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI- 198
E++ +I A + L ++++ G + + + + G
Sbjct: 125 GEKVGRHRIAAVCVGFLGVIVVMQPWGTGFHPAMLLNLGALVGASIYFLMTRKLAGIENN 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L L F+ + + D +F + G+ + + + A S
Sbjct: 185 STAQLWAAGLATFCLAPFAISQWVWPTAPADWVFFVMIGIFGGIAHILVTSAHRLADASI 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + YT + + I++ A VY+ + K K
Sbjct: 245 LAPVIYTQIFPAAFAGIVFFNTYPTVWTMGGGLIIISA-GVYIWYRERQAKKGK 297
>gi|163740429|ref|ZP_02147823.1| hypothetical protein RG210_10017 [Phaeobacter gallaeciensis 2.10]
gi|161386287|gb|EDQ10662.1| hypothetical protein RG210_10017 [Phaeobacter gallaeciensis 2.10]
Length = 287
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 88/291 (30%), Gaps = 9/291 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ T+ G+L + A + + ++ + + V +++ + L
Sbjct: 1 MDTLRGSLLMVLAMAAFALEDMFIKSAARSLPVGQILILFGAGGMVIFAIVARAQGHRLW 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + A+ S TP++ VF
Sbjct: 61 NPVFCTRALLVRSVAEVAGRLCFT------LAIALTPLSSASAILQATPLVVSAGAVVFF 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-AVTWSAYCFARKTIPVGSSEGFFI 198
E + + +A + +L++ ++ AV + R + G
Sbjct: 115 GEHVGLRRWLAIAAGFIGVLMILRPGASGFELASLFAVAGTLGFAGRDLATRAAPAGLSN 174
Query: 199 EMCVLAIP-ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
LA L G + T+ L L+ + + ++ ++S
Sbjct: 175 AHLGLAGFAMLVVAGLIALPFGAPMKTPDAATTIDLAAATLVGVVAYQALTGAMRVGEIS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V YT + +V V + ++ D I ++VI+ L+ +
Sbjct: 235 VVAPFRYTRLIFAMVLGVVVFQERPDMWTLIGSAVIVISGGFTLMRSNRRQ 285
>gi|163795179|ref|ZP_02189147.1| NADH-ubiquinone oxidoreductase [alpha proteobacterium BAL199]
gi|159179577|gb|EDP64106.1| NADH-ubiquinone oxidoreductase [alpha proteobacterium BAL199]
Length = 291
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 87/289 (30%), Gaps = 12/289 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
M G F+ + +G P + + L + R + G+ +
Sbjct: 1 MSGFAFIIVTALFFGSAPTFARLAFDGGTGALTLQLARFALAGAGLSLLLAVTGR----- 55
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + +L + ++ ++ + + S +F P++ L + E
Sbjct: 56 -PMVIRRHHLPLLAALVVLSGGASYGYMTSVRSIPVPVASLVFFTFPLMVGPLAHLLGDE 114
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE-- 199
RL +++A + + ++ + +A+ + + V I
Sbjct: 115 RLTLRRVLALGVGFTGIALLLEGGMAHADPIGLAMAFGGGTCVAVSFQVSRRLTVDIPPL 174
Query: 200 --MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+A + G + ++G + + I+R
Sbjct: 175 LLTATVASACALFSGTLIALHGGLQLPTDARGWTGVLGNAVAYTVGLTCLFAAIQRLGTV 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ P++ + + +L + + ++ + IV+ +V+
Sbjct: 235 RAAVAVNLEPVVSVALAAAVLGEALTGIQLVGAFIVLAGIVLAQGRRPR 283
>gi|148977821|ref|ZP_01814377.1| hypothetical protein VSWAT3_21540 [Vibrionales bacterium SWAT-3]
gi|145963035|gb|EDK28305.1| hypothetical protein VSWAT3_21540 [Vibrionales bacterium SWAT-3]
Length = 282
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 100/289 (34%), Gaps = 10/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L + + ++ + + L V ++ I R L SL + + S
Sbjct: 2 SNITVGILLLIAGNLFASLSDVAVKLLNGEVPPIQYIFFRQLISLMLITPLWLSQSKAQR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ ++ + G + A+ + ++V P++ + L + L
Sbjct: 62 RLQQAKVTLIR-------GQLILIGSGCMVVAITHMSLATANAVFYVAPLLMLPLSVLLL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+ ++IA + + LI+ S A+ +A A + V
Sbjct: 115 KEQPALGKVIATTVGFVGALIVLRPS--QFHWAALFALGTALTLALFNVLVRKLPSEQSV 172
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L LF + + ++ ++ ++ L + ++A S +
Sbjct: 173 VTTLWWTTLFSIPASLILCVLYWQPVSLEHLGYIALSATLILSYNGLAVAAYQKAHSSQI 232
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ EY+ + + + + DT+ I ++++ + + P +
Sbjct: 233 ALAEYSGLVFVALIGAIWFDEIPDTLTFIGIMLIILPLAPFKRPKKRAN 281
>gi|26990149|ref|NP_745574.1| RarD protein, DMT superfamily transporter [Pseudomonas putida
KT2440]
gi|24985085|gb|AAN69038.1|AE016536_6 rarD protein [Pseudomonas putida KT2440]
Length = 295
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 107/293 (36%), Gaps = 5/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A L+ + YT L+ + E+ R L +LP + ++ + +
Sbjct: 3 KGIVSSVMASCLFAVMYFYTSLLKPLDGEEIFGWRTLLTLPCLTLFMLVSKDWKRVGELM 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + +V ++ ++ V F++A L + S YF+ P+ V G + E
Sbjct: 63 GRVKRTPVLLLGMVGTSWLMGVQLWLFLWAPLHGRSLEVSMGYFLLPLAMVLTGRLVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ +A L + +G + F + + G
Sbjct: 123 RLSRLQTVAVACAALGVGHELYQNGSFAWETLLVTIGYPVYFVLRRRCRTDNLGGLWCDM 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P Y V + + G +++ + + S G+
Sbjct: 183 CLLLPWALYFVIQSPLSSADLQAHP-GLYVLVPILGAISASALIAYVLASRMLPFSLFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++ ++ + + I + + + + A++V +L + + + +
Sbjct: 242 LSYVEPVLLVGVALLLG-ETIGPDQWLTYLPIWAAVLVLVLEGFKHLLRQRRR 293
>gi|300814162|ref|ZP_07094445.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511819|gb|EFK39036.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 292
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 97/292 (33%), Gaps = 13/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +G L+ + I++GI P++T+ L ++ + +R+ ++ ++
Sbjct: 1 MKNKLGYLYAISSAIIYGIMPIFTKSLINFGINPITSSFYRM-----FLWLLPIFIYCKF 55
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ D K + + + + + +F+ P I + S
Sbjct: 56 IIKIDLSLKKKDLIEVFLAGALFGGTSITLFSSYKYLGAGCAESIHFIYPCIIFIIMSFV 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
K + + +I+A +L + +L++ S G+ L+ K+
Sbjct: 116 FKNKPSKAEILALILSCIGVLMLADFSDVHELSGVIYAVLSAFFFAFYSVSIEKSNMPNM 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + + + L+ L ++ I
Sbjct: 176 NVMKSLFYVNFFGAIVIGLYALVLKIPIKYDFSHGQWGFLLVYSFFLTIGATLLYQLAIF 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + GI+ P++ +++ I + + + I +V+A + +
Sbjct: 236 KIGATKTGILSTAEPIVSLIAGFIIFSEDMGINKIIAIIFIVLAAIYIVRRQ 287
>gi|300986165|ref|ZP_07177749.1| integral membrane protein DUF6 [Escherichia coli MS 200-1]
gi|301048637|ref|ZP_07195650.1| integral membrane protein DUF6 [Escherichia coli MS 185-1]
gi|300299557|gb|EFJ55942.1| integral membrane protein DUF6 [Escherichia coli MS 185-1]
gi|300306399|gb|EFJ60919.1| integral membrane protein DUF6 [Escherichia coli MS 200-1]
gi|324006720|gb|EGB75939.1| integral membrane protein DUF6 [Escherichia coli MS 57-2]
Length = 319
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 37 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 89
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 90 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 149
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 150 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 209
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 210 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 269
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 270 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 307
>gi|229106662|ref|ZP_04236899.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock3-28]
gi|228676786|gb|EEL31395.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock3-28]
Length = 305
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 104/298 (34%), Gaps = 18/298 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLFITIPSKGVDQEVSLIGDVLILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALVEILYYGFPKIETWKTGFSVMYLVTGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
R S G+ PL+ I +S+ +L + + + +V+I + + N K
Sbjct: 244 RVSASVSGLYLNALPLISIATSIILLNESLTWRVIMGASLVLIGVGWADKQKIRNLLK 301
Score = 39.9 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKQLQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGAIGVLFITIPS 143
>gi|169827733|ref|YP_001697891.1| hypothetical protein Bsph_2192 [Lysinibacillus sphaericus C3-41]
gi|168992221|gb|ACA39761.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 299
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 87/291 (29%), Gaps = 13/291 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + WG++ + LE ++V V++ R + + +
Sbjct: 9 VLMVIVTMFWGLSYTFMVMGLETLAVYNVVALRCIIAFIVAGLIFY--------KRMIKV 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ K + +L + + ++ L + F +T V+ S K+ +
Sbjct: 61 DGKTLKYAAIQGFLLFIVFALSLFGLQSTSVSNAGFILSLTVVLVPIFSSFIDKKLPSRA 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A + ++ + ++T + A + + + E +
Sbjct: 121 VSFAIICTMIGITVLTAQGSFSFHKGDLLVAIAALCYSIYLLLNSSFTRNVESISYGIYQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L ++ ++ L + ++F F + + + G++
Sbjct: 181 LGFAGIYALILTLLFETPALPNNTTSWMAILGLGIICSAFCFVGQTVAQQYTSATHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P+ + ++ + + + I ++I + L K
Sbjct: 241 FSLEPIFAAMFAMMFIGEGLTMKLVIGGSFILIGNLFAQLEHFHVLRFIKK 291
>gi|170723029|ref|YP_001750717.1| hypothetical protein PputW619_3867 [Pseudomonas putida W619]
gi|169761032|gb|ACA74348.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
W619]
Length = 310
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/285 (8%), Positives = 77/285 (27%), Gaps = 6/285 (2%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + L+ + + ++ + RV + G+ + +
Sbjct: 25 LLTLAAVWGASFLFMRIIAPELGTVPTAFFRVSIACLGLIAILAAARVRWNFEGKLGACL 84
Query: 89 KAVGMLVFSATILA-----VHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ V + + + ++ L +
Sbjct: 85 VLGMINSGIPATFYSVAAQVLPAGYSAIFNATTPLMGVLIGALFFRETMTLPKLCGIFLG 144
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
I + ++L + L + L+ ++ + R + S M
Sbjct: 145 LFGVGILSGAGPVALDMALLQGALACLAATTCYGFAGFLARRWISGLDSRLSALGSMLGA 204
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ W+ + + G L + +F + ++ + +
Sbjct: 205 TLMMTPLFAWSALTQPPASWGGWQVWLSLLGLGLVCTAFAYILYFRLLAEIGPVKASTVT 264
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P+ ++ ++L + + ++ A+ + L P
Sbjct: 265 FLIPVFGVLWGAWLLDESLSMGHLYGGLLIAAALWLVLKPARRAQ 309
>gi|30260969|ref|NP_843346.1| EamA family protein [Bacillus anthracis str. Ames]
gi|47526118|ref|YP_017467.1| eama family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49183813|ref|YP_027065.1| EamA family protein [Bacillus anthracis str. Sterne]
gi|177653872|ref|ZP_02935944.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|227816300|ref|YP_002816309.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|254682973|ref|ZP_05146834.1| transporter, EamA family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254725760|ref|ZP_05187542.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
gi|254734385|ref|ZP_05192098.1| transporter, EamA family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254753305|ref|ZP_05205341.1| transporter, EamA family protein [Bacillus anthracis str. Vollum]
gi|254758403|ref|ZP_05210430.1| transporter, EamA family protein [Bacillus anthracis str. Australia
94]
gi|30254418|gb|AAP24832.1| transporter, EamA family [Bacillus anthracis str. Ames]
gi|47501266|gb|AAT29942.1| transporter, EamA family [Bacillus anthracis str. 'Ames Ancestor']
gi|49177740|gb|AAT53116.1| transporter, EamA family [Bacillus anthracis str. Sterne]
gi|172081100|gb|EDT66177.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|227002762|gb|ACP12505.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IV+ ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIVGTMIVMTGCYLFS 285
Score = 35.7 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|332289174|ref|YP_004420026.1| conserved hypothetical protein, EamA-like transporter family
[Gallibacterium anatis UMN179]
gi|330432070|gb|AEC17129.1| conserved hypothetical protein, EamA-like transporter family
[Gallibacterium anatis UMN179]
Length = 298
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/290 (10%), Positives = 78/290 (26%), Gaps = 8/290 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+G A L ++++ L + +++ + + + + V +
Sbjct: 1 MQNRLTLGIFLALSAAALNSTIGIFSKVLIEQGLTIEAISFIKTIIAFVLVSIVLFRQPQ 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTR-----QGFLTSFSYFVTPVIS 131
V + A + + + V +
Sbjct: 61 KEQQQSICPHYSSTVKLWGQIAFCAFLGVFVMFFFETLAYQYGQAANVVVVLMASAAVSA 120
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ G + L E + I+ L+ IL + I++ ++ A
Sbjct: 121 LIGGWLLLAEPIVFSAIVGTLIAILGIFIISWSGSGTWQAVVNASLAGIGYGLFSVFIKR 180
Query: 192 -SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + +L Y+++ E L L F +
Sbjct: 181 FRLNGGLPLIKMLMFFGAIYLLFPFIQHFETINWSWSIALNLLALAVLPTLLGFYCTTKA 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + V + E + P+ + + L + I +V+ +++
Sbjct: 241 LVYLSAAKVQVTELSEPIFSMCLAWLFLSEIPTLYFFIGAVCIVLGIILI 290
>gi|319792037|ref|YP_004153677.1| hypothetical protein Varpa_1350 [Variovorax paradoxus EPS]
gi|315594500|gb|ADU35566.1| protein of unknown function DUF6 transmembrane [Variovorax
paradoxus EPS]
Length = 321
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/313 (11%), Positives = 81/313 (25%), Gaps = 21/313 (6%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIV 72
S + G + I + + + V + +I R+L++LP
Sbjct: 13 SSHAGAKSIAPGLILASLGAIAFSGKAIIVKLAYRYGVDAITLIMLRMLFALPLFAVMAW 72
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G L +G++ + + L ++ P + +
Sbjct: 73 WAGRGKPALTF----RDWLGVVGLGFSGYYLASFLDFAGLAYISASFERLILYLNPTLVL 128
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
G + + R Q++ ++ +L++ H + F V
Sbjct: 129 LFGWILYRRRATRPQVLGMVVSYAGVLLVFGHELWTGGGGKGGGAAAWGAFLVFLSAVSY 188
Query: 193 SEGFFIE---------------MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
+ +A L L ++
Sbjct: 189 AGYLVYSGEFVKRLGSLRLVGLATTVACLLCILQFVLTRPISVAMQLAPEVIWLSVLNAT 248
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + + I+R + PL I+ V IL +P +V+ +
Sbjct: 249 VCTAVPVLMVMMAIERIGPAVAAQTGMIGPLSTILMGVVILDEPFTAWIAAGTVLVIAGI 308
Query: 298 VVYLLPTVINSGK 310
V+ +
Sbjct: 309 FVFTRKGREAPAR 321
>gi|281423442|ref|ZP_06254355.1| integral membrane protein [Prevotella oris F0302]
gi|281402778|gb|EFB33609.1| integral membrane protein [Prevotella oris F0302]
Length = 295
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 92/291 (31%), Gaps = 18/291 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + WG T + T++L + E+ R L + ++F
Sbjct: 4 KKMIWGHIVGIITVLCWGGTFINTKYLIMGGLKPHEIFFLRFLIAYICIWFI-----SPR 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L D K+ + ++ + L AL + + V
Sbjct: 59 RLFCDHWKDEALMVLIGITGGSLFFQAENMAVALSYTTNVSFIGCTAPLITTCMAIAMVK 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTI 188
+ + ++ +L+ + + I+ + L + A + R +
Sbjct: 119 SVKA-DTRLVLGSLIALAGVGIVIFNGQFVLHLNPLGDLLALLSAMAWAVYSLLMKRASS 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G+ I L ++ H FL L + + F ++S
Sbjct: 178 RYGAVFITRKVFFYGLITILPMFAIEPWTFPFHDFLKPTIWLNLLFLGFVASFVCFALWS 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I++ Y P+ +++S L +P+ + + ++++ + V
Sbjct: 238 WVIRKIGAMKASNYIYLNPITTVIASAIFLDEPMTIMAYVGSALILVGVYV 288
>gi|254558169|ref|YP_003065694.1| hypothetical protein p1METDI0078 [Methylobacterium extorquens DM4]
gi|254265712|emb|CAX17067.1| conserved hypothetical protein, DUF6; putative membrane protein
[Methylobacterium extorquens DM4]
Length = 312
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 81/283 (28%), Gaps = 16/283 (5%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + L VS L + R +F + +
Sbjct: 34 WGANWPVMKLGLGHVSPLWFSALRFATGAACLFAWQAARGEVRRPGRAD-----LPVLAS 88
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+A+ A+ ++ + TP+ V + + ER+ Q L
Sbjct: 89 IGLLQMALFTALGAVAMTHLPAGRSAILSYTTPIWVVPVAVLVFGERIGRRQWAGIGLAA 148
Query: 156 LSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ +L++ G + LA + W+ + G+S +L
Sbjct: 149 IGVLVLFNPQAIDWRDGTVVGAHAMLLAASAAWAVCIMHLRYGRSGASAAQLAPWQMLLA 208
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A+ G + L +F FC + + S + +
Sbjct: 209 AAVLLPAAYAVEGPFTGDGTATFWACLIFVGPLATAFCFCAVNAASRLVPASLMSTLMLG 268
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+ +V + L + + G +V+ + +P+ S
Sbjct: 269 VPVTGLVLATAALHETPGPDLILGAGAIVLGIAASAVPSRRAS 311
Score = 41.0 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 40/131 (30%), Gaps = 1/131 (0%)
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ + +G + A A W GE G + L
Sbjct: 34 WGANWPVMKLGLGHVSPLWFSALRFATGAACLFAWQAA-RGEVRRPGRADLPVLASIGLL 92
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + + + I+ YT P+ ++ +V + + I + G+ I ++
Sbjct: 93 QMALFTALGAVAMTHLPAGRSAILSYTTPIWVVPVAVLVFGERIGRRQWAGIGLAAIGVL 152
Query: 299 VYLLPTVINSG 309
V P I+
Sbjct: 153 VLFNPQAIDWR 163
>gi|218232824|ref|YP_002365616.1| transporter, EamA family [Bacillus cereus B4264]
gi|218160781|gb|ACK60773.1| transporter, EamA family [Bacillus cereus B4264]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 285
Score = 36.4 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|328882479|emb|CCA55718.1| integral membrane protein [Streptomyces venezuelae ATCC 10712]
Length = 281
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/279 (12%), Positives = 85/279 (30%), Gaps = 4/279 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY-FSGGLSLLKDT 84
L A ++W + + T+ + V ++ + R + +L V F ++
Sbjct: 1 MLLALLATVVWSGSFVATRGMADSVPPVQAVFWRWVIALVAVAPFAARPFWRQRKAIRRH 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L +L + VH + + + + + + + L
Sbjct: 61 LGFVALASLLGVALYNTLVHQAGLTTSATNMGMIMAASPVIMAVWSRLGGERLGTRRVLG 120
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +L+++ + L G L + A A A G
Sbjct: 121 MAAAVIGVLLLVGKGSLALDLGAGDLWMFAAALSFASYSALLKRRPAEIGGLAFLFVTFL 180
Query: 205 IPALFYVVWNG--FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ AL + F +G L ++ F ++ + + GI+
Sbjct: 181 LGALMLAPVYAVSLAVQGGFTVGAGTVGPLLYVGVASSAVAFFAWNKAVSLIGAARAGIV 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y P+ + + S +L + + + +++ + +
Sbjct: 241 YYLQPVCVALLSYALLGERLGALGAACMALILGGVALSS 279
>gi|325287691|ref|YP_004263481.1| hypothetical protein Celly_2793 [Cellulophaga lytica DSM 7489]
gi|324323145|gb|ADY30610.1| protein of unknown function DUF6 transmembrane [Cellulophaga lytica
DSM 7489]
Length = 311
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 101/295 (34%), Gaps = 17/295 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S T + L F Y++WG T L + + ++ + + R + + VF +
Sbjct: 2 SKSSNTTLIILAFFSIYVIWGSTYLLNKIAVTELPPFMLAAIRFITAGILVFVISKFLKF 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + ++ LA+ G ++AL + P++ + L
Sbjct: 62 KLKITA-----RQLLNTIIAGFLFLALGNGVVVWALRYVDSGFAALEISAQPLVVLLLMR 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFAR 185
+F +++ + I+ +L I+ + ++ I + ++ + S+ A+
Sbjct: 117 IFQGKKIQPMSIVGVVLGIIGIYLLVSQKQVVNKEGSLLGMIMIFVCMVSWSSSSLFVAK 176
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+P +M L G + L+ + F
Sbjct: 177 SDLPKNYFVNTGYQMLSGGFFLLIASFCFGETWSLPTQWQGKTQMAMLLLIVFGSIVAFT 236
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F+Y +K V Y P++ ++ + L + I I +++ +
Sbjct: 237 SFNYLLKFVSPEKVATSTYVNPIIALLLGWYFLDETITIQSVIAAVVLLTGVYFI 291
>gi|309779298|ref|ZP_07674060.1| membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308921856|gb|EFP67491.1| membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 297
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/282 (9%), Positives = 83/282 (29%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A ++W + ++ V + +R + + + F G +
Sbjct: 3 VLYPLLAVLIWAANTIVSKAAAGVVDPAAISFYRWVLAAVVLTP----FCAGPLWRQRHA 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ V + + ++ YA + + P++ + L ++ +
Sbjct: 59 VLAQWRRFAVLALLGMVMYQCLAYYAAHSTSATNMGVIGALIPMLGLLLNVAVFRQPVGA 118
Query: 146 LQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ +L +L + GI + + +AY +
Sbjct: 119 QAVTGVVVSLLGVLYLLGRGEPANLFDGGINHGDVLVLAGATAYALYNILYRRWALPFGQ 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + L + + ++ G+KR
Sbjct: 179 WLNLYVQVLMAVVMLVPVAMTAHSLAVPAKGIGLVVFAGIASSIVASYLWMQGLKRIGSE 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P+ + +L + + I G+V++ +
Sbjct: 239 RTAVLMNLMPVFTAAMAAVMLGETVHGYHWIGGGLVLLGASL 280
>gi|229043449|ref|ZP_04191159.1| Transporter, EamA [Bacillus cereus AH676]
gi|229109151|ref|ZP_04238750.1| Transporter, EamA [Bacillus cereus Rock1-15]
gi|228674161|gb|EEL29406.1| Transporter, EamA [Bacillus cereus Rock1-15]
gi|228725827|gb|EEL77074.1| Transporter, EamA [Bacillus cereus AH676]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQELKHSSL----AGLMVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ I+ + L ++T L I V A FA P
Sbjct: 120 KQKATMFIILGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|229100288|ref|ZP_04231177.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock3-29]
gi|229119317|ref|ZP_04248619.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock1-3]
gi|228664138|gb|EEL19677.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock1-3]
gi|228683128|gb|EEL37117.1| Permease, drug/metabolite transporter superfamily [Bacillus cereus
Rock3-29]
Length = 305
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/298 (15%), Positives = 105/298 (35%), Gaps = 18/298 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWG T++ LE + ++ R+ ++ + FS
Sbjct: 8 ICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGG----ICMLFSFKQLQKSVVH 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + + T +A ++ F Y + G S P++++ + FLKE++
Sbjct: 64 KKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEKIRL 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + +L +T+ S +++ A ++ + +
Sbjct: 124 NYWIGIILGAIGVLFITIPSKGVDQEVSLIGDVLILLSTFLFAFYTVLLKRPKQEQYLSN 183
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ L + + G + + ++ ++
Sbjct: 184 EVFTTLTLIIGAVILLPFALVEILYYGFPKIETWKTGFSVMYLVIGATILAYWFWNKALE 243
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
R S G+ PL+ IV+S+ +L + + + +V+I + + N K
Sbjct: 244 RVSASVSGLYLNALPLISIVTSIILLNESLTWRVIMGASLVLIGVGWADKQKIRNLLK 301
Score = 39.5 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 49/143 (34%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ L +AV A + S + F + L ++++ +
Sbjct: 1 MWGIMKEICMLLVAVILWGTAIAPTKWALESIQPFTLLFIRLFFAGGICMLFSFKQLQKS 60
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+P + + F SYGI V I++ PL+ I+ S F LK+
Sbjct: 61 VVHKKVPWKRMSLLAFTGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTILFSAFFLKEK 120
Query: 282 IDTVRTIVFGIVVIAMVVYLLPT 304
I I + I ++ +P+
Sbjct: 121 IRLNYWIGIILGAIGVLFITIPS 143
>gi|227485841|ref|ZP_03916157.1| DMT superfamily drug/metabolite transporter [Anaerococcus
lactolyticus ATCC 51172]
gi|227236219|gb|EEI86234.1| DMT superfamily drug/metabolite transporter [Anaerococcus
lactolyticus ATCC 51172]
Length = 310
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 95/290 (32%), Gaps = 23/290 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + + ILWG + + +++ R S + LK
Sbjct: 11 LGKIMLLIVAILWGSSLTVVKLASDTFRPNMILAIRFTVSAIILSIIF------WKKLKA 64
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ G+L+ L + + + ++F VI FL L ++
Sbjct: 65 MTKHDIKNGLLI--GVFLFMAYSIQTIGVGYTDPGRSAFLSASYCVIVPFLAWFALSKKP 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA--------------IAVTWSAYCFARKTIP 189
+ IIAA+ I + +++ G + ++A+ A +
Sbjct: 123 DRFNIIAAVFTIAGIYFVSMAGGKGGSVFDQGREAIIGDGLALLAGLLFAAHIVAVTKLS 182
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G + L +V F L + + + +
Sbjct: 183 EGKDPILMTILQFTMAAILSIIVTLVFEDNSAMVLSKKAIFGVGYLAIMCTTVALLLQNI 242
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G K A S+ I+ T + I+ VF+ + + T + I F ++ IA++V
Sbjct: 243 GQKYASASSAAIILATESIFGIIIPVFMGIESLTTNKLIGFALIFIAIIV 292
>gi|220925793|ref|YP_002501095.1| hypothetical protein Mnod_5965 [Methylobacterium nodulans ORS 2060]
gi|219950400|gb|ACL60792.1| protein of unknown function DUF6 transmembrane [Methylobacterium
nodulans ORS 2060]
Length = 328
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 76/283 (26%), Gaps = 14/283 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F + G++P+ + + +V RV +LP + + + L
Sbjct: 38 LAALFLGAVAMGVSPVLVRLVSPEVGPFASAFWRVALALPAL----YGWMRVEEAHRPHL 93
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + A F+ A+L +F PV + + L+ R
Sbjct: 94 RRQAFDPAALVAGLAFAGDLVFWHRAILGTTVANATFFATTAPVFVMLFAWIGLRRRPAL 153
Query: 146 LQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L + + S G + + + G
Sbjct: 154 ATLAGLALCLAGGAALIGQSVQVDPARLAGDRDGVVTAVFFALYFLAVERARARGLGAAR 213
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + V + L ++ + S + R
Sbjct: 214 VTFVASCVTALVLLGVVLVAETRPVLPHSAGAIAGLVALALLSHAGGQGLLSVALGRLPA 273
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + + +L + + + + +++I + V
Sbjct: 274 GFSSLVIFLEAVAAAALGWLVLGEALSGPQALGGALILIGIAV 316
>gi|218896626|ref|YP_002445037.1| transporter, EamA family [Bacillus cereus G9842]
gi|218542408|gb|ACK94802.1| transporter, EamA family [Bacillus cereus G9842]
Length = 301
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 88/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQMIFSKNTS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + L V + + LL F ++ V+ L +FL
Sbjct: 62 KQDIKQSSL----AGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 118 KQKATIFIVLGIAVATAGLYLLTAADSFQLNIGDILVLGCAIAFAAHILINGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 178 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ P+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVEWPSKTKK 296
>gi|90422014|ref|YP_530384.1| hypothetical protein RPC_0490 [Rhodopseudomonas palustris BisB18]
gi|90104028|gb|ABD86065.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisB18]
Length = 315
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 81/301 (26%), Gaps = 17/301 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
V + WG + + L +V + R L +L + L
Sbjct: 20 IALVMLCCLSWGFNQIAIKLVLPEVPPFLQATIRSLGALLVIGLIAQARGVKL------W 73
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ A +F+ + + + L+ + P F L ERLN
Sbjct: 74 QRDGAWRAGLFAGVLFGIEFVLIYRGLMLTTASRAVVFLYTAPFFVAFGAYQLLHERLNR 133
Query: 146 LQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
LQ L + + + G ++ A+ + + T
Sbjct: 134 LQWGGLALSFVGVALAIGVPQPNVDAGVLLGDLMMIGGGALWAATTLIVKTTRLGRVPAE 193
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V + + + + L + F ++ +K
Sbjct: 194 KGLGYQVAVSIPILALAAWLSGETVPQWPTPLSLALMAYQAVWVVGLTFLLWFGLVKTYS 253
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S + + PL + + I+ P+ + +V + + P + +
Sbjct: 254 ASKLSSFTFITPLFGVAAGYLIMDDPLTPTFGVAALLVTAGLYLVNRPAPRAEPAARPDR 313
Query: 316 S 316
+
Sbjct: 314 T 314
>gi|319653861|ref|ZP_08007955.1| hypothetical protein HMPREF1013_04574 [Bacillus sp. 2_A_57_CT2]
gi|317394397|gb|EFV75141.1| hypothetical protein HMPREF1013_04574 [Bacillus sp. 2_A_57_CT2]
Length = 309
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 88/283 (31%), Gaps = 15/283 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + R ++ + + + + +L+
Sbjct: 14 WGGNFIVGKTLVDHASPITLTILRWAIAIICLVPLV-----WHKEKRLLPPKNAILPLLL 68
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A+ AL + +FLKE++N LQ+++ + +
Sbjct: 69 MGITGVALFQALQFMALEKTSATSVGLISTLNMFSIAAFSFIFLKEKINILQLMSMFISL 128
Query: 156 LSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+L++ +A ++ + S + + I
Sbjct: 129 FGVLLVLSKGSLELLVSLHFNNGDLYMMAAVGMWGIYSVCSKWAMSFVTPMMSILYSGIF 188
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
L ++ +G + L + +++ G+ + ST G+
Sbjct: 189 GLLVLLPFNTAGFTVTDVSASFLLSILYTGLISTVLCMVLWNIGVNQLGPSTSGLFLNFN 248
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ + + L + ++ ++ + IV+ ++
Sbjct: 249 PIFTAILAFIFLGEVLNWIQAVGSLIVIAGCFLFSALKTRTGK 291
>gi|265753608|ref|ZP_06088963.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263235322|gb|EEZ20846.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 302
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 87/285 (30%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG T + T+ L +S ++ +R + ++
Sbjct: 12 LMAIITVAIWGTTFVSTKILIQHGLSPSDIFFYRFTLAYLCMWCISY-------KKLFAN 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ +++ AL S +PV++ L +F ++
Sbjct: 65 RIKDELLLLLAGLCGGTIYFITENTALGITLASNVSLIVCTSPVLTTLLSYLFRRKEPFT 124
Query: 146 LQII-AALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
++ +++ ++ + ++ + L + + +
Sbjct: 125 RHLVYGSIMALIGVGLVVFNGSFILKINPLGDILSLTAALMWAFYCLILKQLDNHYSIVF 184
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L ++ + + I L + + F ++ +K
Sbjct: 185 ITRKVFFYGVLTILPMFLFRPLNWDNVLMMQPIVFGNLLFLGFVASMLCFIAWNACVKEL 244
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S I+ + I + +++ + +
Sbjct: 245 GAVKSTNYIYIVPLVTLLTSAVIINEKITWIALTGCFLILCGVYL 289
>gi|254739965|ref|ZP_05197657.1| transporter, EamA family protein [Bacillus anthracis str. Kruger B]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITXLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IV+ ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIVGTMIVMTGCYLFS 285
Score = 35.7 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|206970516|ref|ZP_03231468.1| transporter, EamA family [Bacillus cereus AH1134]
gi|206734152|gb|EDZ51322.1| transporter, EamA family [Bacillus cereus AH1134]
Length = 301
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 2 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 62 KQELKHSSL----AGLMVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIP 189
K++ ++ + L ++T L I A F++K P
Sbjct: 118 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 178 LLLSTSQVLAVGIFSSICAFLFEDWKKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 296
>gi|304439679|ref|ZP_07399581.1| DMT superfamily drug/metabolite transporter [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304371859|gb|EFM25463.1| DMT superfamily drug/metabolite transporter [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 305
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 97/294 (32%), Gaps = 7/294 (2%)
Query: 27 TLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F+ I+WG+ ++ + ++ V R L + + I+ +
Sbjct: 8 VFFLGLTSIIWGLAFVFQSTGMDHVGPYTYNFGRGLLAGLSLLILILVRPKSMKENHKVD 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K VG +V LAV ++ F + V L +FL ++ +
Sbjct: 68 KKLTVVGGIVI-GLCLAVGQNLQQLGIVYTDVGKAGFLTTLYIVFIPIL-YLFLGKKPDR 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ LL ++ L +++ G + + A + +++ +
Sbjct: 126 KVFLCVLLAVVGLYFISIKEGFVIEKGDILLILGAIGYAVHIMVISYYSPNTDNVMLSCI 185
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ ++ F+ T L L ++ + I +K + +
Sbjct: 186 QFFVYSIISLIIALFTEDVTLSGIWDARTSLLYTGVLSSAVGYTISIVALKDFDATIGSL 245
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ ++ ++ +L Q + T+ IV IA ++ + T KK
Sbjct: 246 ILSLESIVAAIAGAVLLHQFLTPRETVGCAIVFIATILAQIDTSKIKEFLAKKK 299
>gi|298251471|ref|ZP_06975274.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297546063|gb|EFH79931.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 315
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 79/279 (28%), Gaps = 5/279 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L V A LWG L+ + + +++ RVL + +F + L L
Sbjct: 7 GVLLVLAA--LWGGGFLFIRIATPAFGPVALMAMRVLLTGLCLFVFALVTRTRLELRTYW 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYA--LLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +L ++ + F + ++
Sbjct: 65 HHYLVIGIINAALPFLLIGVAELYLTSGLAALLNATTPLFGAITAVIWMREAMTIKKVVG 124
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L + ++ S L + + + + A + +G+
Sbjct: 125 LGLGLLGVVIVAGWSTLPFSTTLILAVGASLAAAASYGLASVYIKVSLGNKVSSLATATC 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A +++ F L + ++ + I A + +
Sbjct: 185 SQFFATLFLLPLTFVAPPTRVPTLTEWLSVAALALLCTAATLLLYIWLIAHAGPTKALTV 244
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ AP+ + V LK+P+ + ++++ +
Sbjct: 245 TFLAPVFGVFWGVLFLKEPLTLSPFVGLVVILVGAGLVT 283
>gi|294509155|ref|YP_003566083.1| integral membrane protein (DUF6) [Bacillus megaterium QM B1551]
gi|294352079|gb|ADE72403.1| integral membrane protein (DUF6) [Bacillus megaterium QM B1551]
Length = 292
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 101/291 (34%), Gaps = 15/291 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T++G++++ A +WG + + + + LE++ R + ++ +F +
Sbjct: 2 KNTLLGSIYLALAASIWGGMYVVVKVVVAVIPPLELVWIRYVIAILALFIIGLIKRQSWR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ A+ Y + + + TP V + L
Sbjct: 62 I-----NKRHIPLIVAIGVIGNAISIVTQEYGTMLSSAQMGAIITSSTPAFMVIFARLIL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYCFARKTIPV 190
KERLN + I+ L + +L++ + G+ LL A+ + R
Sbjct: 117 KERLNMKKGISVGLATIGVLLIVGNGHINMSSQLGGLSLLMAALTWALMSILIKRVPSSY 176
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ V + +V + L + + F +++ G
Sbjct: 177 SPVVITTYSILVAILVLTPFVYKGLGEIHISKLIDPTIGGGLLYLGIVSTALAFILWNRG 236
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ S+ G+ + PL+ + +L + I I +++ +++ +
Sbjct: 237 LQLLNASSGGLFFFFQPLVGTLLGWLLLGESIGGTFWIGSFLILSGVLLVI 287
>gi|257482172|ref|ZP_05636213.1| hypothetical protein PsyrptA_02822 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|330987667|gb|EGH85770.1| putative DMT superfamily transporter inner membrane protein
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 304
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 85/301 (28%), Gaps = 4/301 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + K +G L+ + V + T + +
Sbjct: 58 RYRSVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAALVLFAAASWAFGSVLSKHMPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + Y P + ++ V + I + +++ A+V+ LP S K
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGIEECLAMVVIISAVVLIGLPQWRRSAVRK 297
Query: 313 T 313
Sbjct: 298 V 298
>gi|254282376|ref|ZP_04957344.1| Integral membrane protein DUF6 [gamma proteobacterium NOR51-B]
gi|219678579|gb|EED34928.1| Integral membrane protein DUF6 [gamma proteobacterium NOR51-B]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 12/281 (4%)
Query: 41 PLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSA 98
L+ + L + ++ +V + R + ++PG V + V
Sbjct: 6 GLFAKALYTQGLNYHDVAAIRSVLAVPGFVLIAVINGQRTRRSQSFFTPWAIVAAAASGL 65
Query: 99 TILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL 158
+ YAL Q + F P + V L +V + + A + +
Sbjct: 66 LCYYLGSLMDFYALTLIQANVERALLFSYPAMVVALQAVLTRRWPPLSTLGALCATTVGI 125
Query: 159 LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
+++T + L + I + A + G +
Sbjct: 126 VLVTGAADTTLTAEEIEGVAWVLFCSMTIAIYFLVSARLTLSMGSANFTAIAMTAAGVAF 185
Query: 219 GEHFFLGNIPDT----------LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
H+ L L + G++R S ++ P
Sbjct: 186 LVHYQLTTPGWLAIDLNAGSALTMLGLVVFATILPLFFMAEGVRRIGASRGALISTLGPP 245
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + + + I +VV+A+ L +
Sbjct: 246 ATAIMAYEFYGEILTPAQIIGTLLVVLAVAFLELRSRQRQK 286
>gi|90409707|ref|ZP_01217724.1| hypothetical protein P3TCK_03051 [Photobacterium profundum 3TCK]
gi|90329060|gb|EAS45317.1| hypothetical protein P3TCK_03051 [Photobacterium profundum 3TCK]
Length = 322
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 89/300 (29%), Gaps = 19/300 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVY------ 73
TM G + LWGI + T LE + ++ R + +
Sbjct: 2 TNTMKGWIAAIFIGSLWGIPWIVGTPILEVMDPQVLVWARYTVAFITLGIVFNVGLATGK 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
F +L + P++ +
Sbjct: 62 LKKKQDFKLTWANRHDVFWAAACGIIGQGAFSFFSFLSLDYITASENGVIQGLIPILILS 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G R N +Q++AAL + I+ + I A +
Sbjct: 122 VGFFRHNARFNMMQMVAALGAFAGVAILVMDPNSETNGFNIGHLICLASAASFACTAYAR 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFL------------GNIPDTLFLIGYGLLNS 241
+ +A +V + G F + +I ++
Sbjct: 182 AELAEKYGSVATMFHQFVFASIGFGFYLMFSGADFSSALGIFSSPLRILCIVILGVGISG 241
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ Y ++R + G+ PL V +VF L + + +R + G+V+ +MV+++
Sbjct: 242 TSYLVYIYAMERVGVDGTGMALNLMPLSSFVLAVFALGEAVTPMRLLAIGVVIASMVLFM 301
>gi|86357839|ref|YP_469731.1| permease protein [Rhizobium etli CFN 42]
gi|86281941|gb|ABC91004.1| probable permease protein [Rhizobium etli CFN 42]
Length = 306
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/312 (10%), Positives = 95/312 (30%), Gaps = 19/312 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
++ G + A + +++ E +S ++ +R + + +
Sbjct: 1 MSEPHQNSLQGMAIMSGAMFILPTMDAIAKYMATFESMSPGQITFYRFFFQIACTLPILF 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G + + + M + + F A+ YFV P +
Sbjct: 61 ALFGLKAF------SARRPWMNLLRGMLHGAASLLFFVAVKYMPLADVFAIYFVEPFMLT 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L ++FL E++ + +A ++ +I+ S A+ A+ F+ +
Sbjct: 115 GLSALFLGEKVGWRRWMAIVVGFGGAMIVIQPSYEIFGLKALLPVACAFLFSLYLFLNRA 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFS----------GGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + + + ++ + + L+ G ++ +
Sbjct: 175 IGEADSPLTMQTMAGIGGTIFMAAALLVGSGAGNADFTISLPSSGLGLALLLALGSISGY 234
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + A LS + +Y + V + + I I+V + + +
Sbjct: 235 AHMLVVRAFRLAPLSLLAPFQYFEIISATVLGYALFNDFPSFSKWIGICIIVASGLFIIW 294
Query: 303 PTVINSGKNKTK 314
+ + K+
Sbjct: 295 RERLQARSLKSS 306
>gi|332282888|ref|ZP_08395301.1| transporter YijE [Shigella sp. D9]
gi|332105240|gb|EGJ08586.1| transporter YijE [Shigella sp. D9]
Length = 326
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 44 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 96
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 97 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 156
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 157 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 216
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 217 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 276
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 277 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 314
>gi|312886792|ref|ZP_07746399.1| protein of unknown function DUF6 transmembrane [Mucilaginibacter
paludis DSM 18603]
gi|311300894|gb|EFQ77956.1| protein of unknown function DUF6 transmembrane [Mucilaginibacter
paludis DSM 18603]
Length = 315
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/318 (12%), Positives = 101/318 (31%), Gaps = 26/318 (8%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + + P M+ F YI+WG T + Q + + + + + R + +
Sbjct: 4 NNQKSVSPVMVAIAFATV-YIVWGSTYFFIQIAVHGIPPMLLGAARFFTAGLLLLGWCAI 62
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + V +L V G I+ T + + P+ V
Sbjct: 63 KGEKL------FNRNNILHAAVSGILLLCVANGTVIWVEQTLPSAMVAIMVSSAPIWFVI 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH------------------SGIPLLSLAIA 175
L K+ + I+A LLI + +I+ + +++
Sbjct: 117 LDKPKWKDNFKNRSIVAGLLIGFTGVILLFGEQVAKSLGESNGQSKLGGMALLIVASIAW 176
Query: 176 VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
+ S Y R T + + + ++ + + +
Sbjct: 177 PSGSLYSKYRATQGSVMVNTAWQMLIAGIMFIPGMLLHHETEHLSWQKVPATSWFALIYL 236
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + + + ++ + V Y P++ ++ +F ++ I ++ I++
Sbjct: 237 IVFGSIAAYSAYVWLLQVRSAAQVSTYAYVNPVIAVLLGIFFAREHISLLQIAGLVIILA 296
Query: 296 AMVVYLLPTVINSGKNKT 313
++++ L + KT
Sbjct: 297 SVLLINLAKYQKEKQIKT 314
>gi|312880783|ref|ZP_07740583.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
gi|310784074|gb|EFQ24472.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
Length = 330
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 88/258 (34%), Gaps = 9/258 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A +L+G + L+ + + + + RV ++ + + L ++ P+
Sbjct: 13 LAVLLFGFSGLFARLI-HLPAWTITWGRVTFASLSLMVLFLLRGESLR-----MRTPRQT 66
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ + + +LA HW F ++ T + + ++ P+ + FL + +ERL + A
Sbjct: 67 ALALGAGVVLAGHWSAFFQSIQTSTVAVGTLTFATFPLFAAFLEPLIFRERLRLRDLTTA 126
Query: 152 LLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
++IL + I+ + + S + +
Sbjct: 127 SVLILGVAILVPRADLGDAMTRGILWGMLGSLSFAVLSLMNRSLVRDNRGTLVAFYEQGA 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+V L L + + + +F G+++ G++ P+
Sbjct: 187 AALVLTPLVLLRRDPLPLPDLALLALVGVVFTAGAHSLFIGGMRKVTARAAGVISGLEPV 246
Query: 269 LMIVSSVFILKQPIDTVR 286
I+ ++ +L +
Sbjct: 247 YAILGALVLLGETPSLRE 264
>gi|299537620|ref|ZP_07050913.1| hypothetical protein BFZC1_16420 [Lysinibacillus fusiformis ZC1]
gi|298726989|gb|EFI67571.1| hypothetical protein BFZC1_16420 [Lysinibacillus fusiformis ZC1]
Length = 299
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 88/277 (31%), Gaps = 18/277 (6%)
Query: 37 WGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + + + L + R W + + F + + + ++ V +L
Sbjct: 16 WGGNFVIGRAVSEDIPPLTLAFLR--WCVAFIIFFPIAYHQLKREWRILKRHWFIVIILS 73
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ + L S TP++ L +FLKE+L+ Q+I +L +
Sbjct: 74 LTG--VTAFNTLVYIGLHYTTSINASLMNSSTPIMIYILSFIFLKEKLSKFQLIGTVLSL 131
Query: 156 LSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + + + + + + F + + +
Sbjct: 132 SGVAFIIMGGSFKRIVDFTFNKGDLIVIAAVFCWSIYSLLIKQYATRLPGQSTFLVTIGL 191
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
AI + ++ S L + F ++ G+ + + I
Sbjct: 192 GAIVLFPFSLYETMSSTTAIHWEWSTIAAILYVGIFASIIAFLCWNSGVIQLGANKASIY 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + +V L + + + + I VV +++
Sbjct: 252 LNFIPVFASIFAVLFLSENLHSFQLIGGLAVVAGVIL 288
Score = 38.4 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
P L L +A F + + + + + +
Sbjct: 4 PPYLLLVLATLLWGGNFVIGRAVSEDIPPLTLAFLRWCVAFIIFFPIAYHQLKREWRILK 63
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+ +I + + G+ +M + P+++ + S LK+ + +
Sbjct: 64 RHWFIVIILSLTGVTAFNTLVYIGLHYTTSINASLMNSSTPIMIYILSFIFLKEKLSKFQ 123
Query: 287 TIVFGIVVIAMVVYLLPTVINS 308
I + + + ++
Sbjct: 124 LIGTVLSLSGVAFIIMGGSFKR 145
>gi|260495336|ref|ZP_05815463.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_33]
gi|260197114|gb|EEW94634.1| DMT superfamily drug/metabolite transporter [Fusobacterium sp.
3_1_33]
Length = 301
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 88/302 (29%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L F LWGI + FL + V+ +I +R++ + + + Y
Sbjct: 1 MKKDNNFGMLTTFIGGTLWGINGVMGSFLFLNKNVTTAWLIPYRLVLAGLLLLGYLYYKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + + +++F + + A+ + + + P + +
Sbjct: 61 GS-KIFDILRTPKDLLQVILFGLIGMLGTQYTYFSAIQYSNAAIATVLTYFGPTLVLIFI 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ K + +I+A L + ++ H L + S + +
Sbjct: 120 CLKEKRKPLKYEIVAIALSSFGVFLLATHGNITSLQISFKALVWGMLSALSVVFYTVQPE 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + I + + + ++ F ++
Sbjct: 180 KLLEKYGPPTVVAWGMIIGGIAITFMTKPWNIDVIFDFTTFFVLMLIILFGTITAFILYL 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + I+ P+ + ++ L + + F ++ + +
Sbjct: 240 TGVNIIGPTKASIIACIEPVAATICAILFLGINFGFLDLLGFICIISTIFIVAYFDRKTK 299
Query: 309 GK 310
K
Sbjct: 300 KK 301
>gi|239986653|ref|ZP_04707317.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
Length = 317
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/290 (10%), Positives = 76/290 (26%), Gaps = 14/290 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSG 76
+ +LW + + + S + R+L + ++
Sbjct: 2 TTTTHPWRAPAAACTTVVLWASAFVSIRSAGEAYSPGALALGRLLAGTLVLGAILIVRRE 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
GL ++ ++ + + + P++ G+
Sbjct: 62 GLPGRGAWPG------IITSGVLWFGLYMVALNWGEQEVDAGTAAMLVNIGPILIALFGA 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR-------KTIP 189
L E L ++ + +++ L S + V +
Sbjct: 116 RMLGEGLPRRLLLGMGVSFAGAVVVGLAMSGHGGSSVLGVALCLLAAVAYAAGVVSQKPA 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ I I A+ + + G E + + F + Y
Sbjct: 176 LAHGSSLQINTFGCLIGAVACLPFTGVLVSEAADAPLSATLNMVYLGVFPTALAFTTWGY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ R +G Y P L++ + +L + + + + + + V
Sbjct: 236 ALARTTAGKMGATTYAVPALVVGMAWVLLDEVPTPLGIVGGVLCLAGVAV 285
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 25/79 (31%)
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
G + L ++G + T ++ P+L+ + +L + +
Sbjct: 64 PGRGAWPGIITSGVLWFGLYMVALNWGEQEVDAGTAAMLVNIGPILIALFGARMLGEGLP 123
Query: 284 TVRTIVFGIVVIAMVVYLL 302
+ G+ VV L
Sbjct: 124 RRLLLGMGVSFAGAVVVGL 142
>gi|254501401|ref|ZP_05113552.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222437472|gb|EEE44151.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 299
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 97/300 (32%), Gaps = 12/300 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G L + A L G ++ F S + V R L+ G+ L
Sbjct: 2 SERTTGILEMTFAMTLIGTLGIFVVF-SGESPVTVAFWRCLFGAIGLALIC-----SLKG 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+PK + V L +W YA+ LT+ Y P + V G +F
Sbjct: 56 AFAFKISPKQFLLAVLGGIALTTNWVMLFYAIGHASISLTTAIYNTQPFMLVCFGVLFFG 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
E L ++ L ++++ + +A+ +A +
Sbjct: 116 EHLTLRKLCWLGLAFCGVVVIAQSKPELAYANGNFAVGVALSIGAAFLWAVAVVVTKKLS 175
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G + L + ++ F+ + L + + ++ I +++
Sbjct: 176 GIPSHLIALIQVSAGAILLAPFASVSDLPSQSTAWASLLTLGFVHTAMMYTILYSAVQKL 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
G + + P + V+ +L Q + TV+ + ++++A L + + +
Sbjct: 236 PTDLQGALTFLYPSVAYVTDYLVLGQKLGTVQILGVAVIMLAAAGMTLGWRLPFFRKEKS 295
>gi|158422067|ref|YP_001523359.1| putative transmembrane protein precursor [Azorhizobium caulinodans
ORS 571]
gi|158328956|dbj|BAF86441.1| conserved hypothetical transmembrane protein precursor
[Azorhizobium caulinodans ORS 571]
Length = 299
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 81/294 (27%), Gaps = 17/294 (5%)
Query: 14 LSKENASLPTMM-GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
++ + A + G + + G + L+ + L V R +LP +
Sbjct: 1 MTSQPAPSLRLAAGISALVLGALAMGASVLFVR-LADVGPFASAFWRTALALPFLLV--- 56
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ ++ + P V + A F+ A+L + +P+
Sbjct: 57 -----WARIETGPRLPVPDRASVLAGLFFAGDLIFWHLAILGTTVANAAVLATTSPIWVA 111
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAYCFAR 185
L+E + LL I L + S + A F
Sbjct: 112 LYAFFMLREPFTKPLVAGLLLCIAGTLALIGQSWQFAPEKLAGDAAGLITAMFFASYFLS 171
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + AI +L +V L +
Sbjct: 172 VRVARRRFGAGLVTFLSTAITSLALLVVALVMEPVLLPHTLQGALAVLALAVVSQVGGQG 231
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + G+ ++ + + +L + + ++ ++V+ +V+
Sbjct: 232 LMAVGLSVVPPVFGALVFFLEVVSAAALGWLVLGEHLGLLQYCGAALIVLGLVM 285
>gi|75763345|ref|ZP_00743085.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74489169|gb|EAO52645.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 320
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 92/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 17 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 76
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++V A++ F+ ++ S ++P+ + L +
Sbjct: 77 RIERKDWLR-----LVVVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 131
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 132 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 191
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 192 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIIFATIFGLSMW 251
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 252 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLLGGLIIFIGLYVVKKGGIKK 311
>gi|328913996|gb|AEB65592.1| putative transporter [Bacillus amyloliquefaciens LL3]
Length = 341
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 95/287 (33%), Gaps = 11/287 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + +++G +++ V +E++ R L + + +
Sbjct: 48 VIKMVISMVIFGSIGFFSEH-TNVPSIELVFVRCLCASLFLGVCWFGSGRY----RTEQW 102
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + V + L ++W F + + Y + PV+ + LGS+ +E+L
Sbjct: 103 NRREVLQTLACGFFLVLNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSLIYREKLRLA 162
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIEM 200
+ + ++ L +++ +G S + A + G +
Sbjct: 163 SVSSIVICFLGTALISGINGNTSFSQLMGSGIIWAVLAALFYAFTTLAGKGINSLSPYAV 222
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++ G L ++ + + + V+ +F ++ +
Sbjct: 223 TCLQTGLGVIILLPFVRFGAFSDLSHMNWIMIVSTGIIHTGIVYLLFFDSLRFLSTRFIS 282
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I+ + P + IV D +++ ++ M + L+
Sbjct: 283 IIVFLDPAVAIVLDTVFTGFRPDLYQSLGIVMIFAGMALSLMRKHKA 329
>gi|317014622|gb|ADU82058.1| putative membrane transport protein [Helicobacter pylori
Gambia94/24]
Length = 302
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 106/302 (35%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISDPSVENVGPVEIIMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLAGMFVDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
KN
Sbjct: 296 KN 297
>gi|307248090|ref|ZP_07530119.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306855488|gb|EFM87662.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
Length = 280
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 106/281 (37%), Gaps = 6/281 (2%)
Query: 33 AYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK---NPK 89
A L+G+ + L ++ + +R++ P + AI+ F + K NP
Sbjct: 3 ANFLFGLGYYFAILLRPLNGESMFGYRIVVLAPFILLAILLFKQTNKFQQLWQKIKQNPP 62
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V +L+ A + F++A Q S Y + P+++V L + KE L+ +
Sbjct: 63 LVLVLLLLALNTGIQLWLFLWAPNNGQAIEVSIGYLLLPIVAVALSKIVFKEHFTLLKWL 122
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ ++ + +G + +A + L + F
Sbjct: 123 SLGFAVIGVASNIWLTGSFSWATIVAGIGYPLYITLRRYFE--INTLATFFVELLLVMPF 180
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + N FL +GL+N F ++ ++ +G++ Y PL+
Sbjct: 181 AGYFIDQTDMQPILANNQHIYYFLALFGLVNGAAFILYIASSNLLPVNVLGLLGYVEPLV 240
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
M+ S I + +D+ ++ + +A+++ + + +
Sbjct: 241 MLCVSFMI-GEVLDSKSYLLMICLALAIILLTVDNFRLTRR 280
>gi|293391756|ref|ZP_06636090.1| RhaT protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952290|gb|EFE02409.1| RhaT protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 296
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 106/299 (35%), Gaps = 14/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L +F + ++++ LE + + I R ++L + F + F +
Sbjct: 1 MKKYTGELLLFIVTFIAASGWFFSKYSLEGMPTMGFIGLR--FTLACLIFLPLSFKAIIK 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +VG+ +L + + + +F Y + +I+ + +
Sbjct: 59 LTTSQKLKAASVGLAYIVNMVLWITGL-----IYSEDLGEGAFLYSLAMLIAPVISWILF 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
+ + ++ + L I L ++ G L +A +A F +
Sbjct: 114 QYQPKYVFWFSLPLAISGLYFLSNEDGKGLHLSYGNILFLLASCSAALYFVLNNQFSKNI 173
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ L + ++ +F + F+ + + + + K
Sbjct: 174 PTLSLTTIQLGVVGFLAGSYSLIFEKWYFPIPENTWFWFVGSTLIATNLRVFLQTVTQKH 233
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ V I+ P+ +V S+ IL + + + + +++ A++VY P ++ NK
Sbjct: 234 CDINNVAIIMLLEPIWTMVFSMIILNESMSRQKMLGCILILNALIVYCFPGMLKRRTNK 292
>gi|289523841|ref|ZP_06440695.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502497|gb|EFD23661.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 300
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 85/286 (29%), Gaps = 11/286 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
V ++ T L + L + ++RV + +F F+ + +
Sbjct: 14 FLVLGVGVIAVSTGATIIRLAEAPALVISAYRVGLASLLLFP----FTYHYAKEEIKSLT 69
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K + + V S L++H+ F+I +L + P+ L +RL +
Sbjct: 70 LKDLKVAVASGAFLSLHFAFWISSLDYTTVASSVVLVNTNPIWVALLTPFMSSDRLRGMS 129
Query: 148 IIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVG---SSEGFFIEM 200
++ ++ +++ G L +A+ S
Sbjct: 130 LLGVAFSVIGSAVISAGDFALGGKALYGDFLAIAGSWCAAFYLLFGRRLRQKLSLLSYIT 189
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ A+ G F F +++ +K V
Sbjct: 190 ICYSTAAVILFALIICLGYPLFGYPKKTWLCFWGLALFPQIIGHSSYNWSLKYFSAGFVA 249
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
I P++ + + F L + I + +V+ +V+ L
Sbjct: 250 IALLGEPVVSPILAYFALGEAIMPITIFGGSLVLAGIVLAALGENR 295
>gi|260428646|ref|ZP_05782625.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260423138|gb|EEX16389.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 317
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 87/292 (29%), Gaps = 8/292 (2%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L++ + + + L V E + +V
Sbjct: 23 AQSPVRGVLWMVVTGLCFVAVTALVKTLGGRVPAAE-------SAFLRYLLGLVLLLPAW 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ P+ G+ V + +A+ + ++TPV L
Sbjct: 76 RDLRGVQMTPRLWGLTAVRGAAQTVGVICWFFAMTRIPLAEVTAMNYLTPVYITILAVFV 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ERL +++A L++ L A+ +A F+ +
Sbjct: 136 LGERLAIRRMMAIAAAFAGALLILRPGFRELDPGHFAMLATAALFSVSYLVAKIVSAELP 195
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+A+ ++ + + ++ D L+G + + A ++
Sbjct: 196 AAVVVALLSVSVTLGLLPFALAVWVTPSLTDFGILVGVACFATGGHYAMTLAFAAAPVTV 255
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + ++ +P D +++ +++ + +
Sbjct: 256 TQPVTFLQLIWAVLLGAVFFGEPADVWVMAGGAVIMGSVLFITWREAVLKRR 307
>gi|226951411|ref|ZP_03821875.1| DMT family permease [Acinetobacter sp. ATCC 27244]
gi|226837833|gb|EEH70216.1| DMT family permease [Acinetobacter sp. ATCC 27244]
Length = 307
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 95/303 (31%), Gaps = 19/303 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ +L + G + V A ILWG T + +S L + + +
Sbjct: 1 MKGSTFNLSSHYGFIAVLVASILWGTTGTAASYAPNLSPLAIGAIAMGGGGLLQALLAHR 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + VG++ + LA + + + S P+ +
Sbjct: 61 NILGHLPQIRSYLPLLLVGVISVAIYPLAFYSSMRMAGITIGTV----ISIGSAPLFTAL 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------------IAVTW 178
L F K+ L+ I+ + ++ + ++++ S IA
Sbjct: 117 LEKFFDKKSLSKQWFISFIFGVIGVFLLSIGESHSHGSTQNISTDQKTIGIILGLIAALT 176
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ + M ++ ++ F G + F I + +
Sbjct: 177 YSLYSWAAKKMIDRGVDSKASMGLIFGFGALILLPTLFFTGSNLFDEPINLYVVGYMMLI 236
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +F Y +K ST + PL+ + +V ++ + + + I ++ + +
Sbjct: 237 PMFLGYLLFGYALKTISASTATTLTLFEPLVAALFAVLLVGERLAPIGWIGMLLIFLCLA 296
Query: 299 VYL 301
V
Sbjct: 297 VLS 299
>gi|217424268|ref|ZP_03455767.1| protein RarD [Burkholderia pseudomallei 576]
gi|217392733|gb|EEC32756.1| protein RarD [Burkholderia pseudomallei 576]
Length = 297
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTGAGDDPQAARGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIIWTAPGALAVVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLSRAFASRRLALSLAASAGLLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSALQWLALACAAAGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L +GG + + L G G +++ +
Sbjct: 181 ADSLALFSVE---MLALLPIAAAMLAAGGTSVAGRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLGEALSWQQLATYAPIWAAVALTAWHGFLIARR 297
>gi|194367258|ref|YP_002029868.1| hypothetical protein Smal_3486 [Stenotrophomonas maltophilia
R551-3]
gi|194350062|gb|ACF53185.1| protein of unknown function DUF6 transmembrane [Stenotrophomonas
maltophilia R551-3]
Length = 298
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/299 (17%), Positives = 104/299 (34%), Gaps = 9/299 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N ++ A + + + L LEV R SLP V ++ +G
Sbjct: 2 NLQRSPSRAVTWMVAAVACFSLMDAGMKQLSASYPTLEVTFLRGAASLPFVLVWVLVSAG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
SL+ P+ G+ + + G F++AL YFV P++ L
Sbjct: 62 PRSLI------PRRWGLHLLRGALGMAMIGCFVFALRDLPLSTAYTIYFVAPLLIAALSV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L ER+ + +A + ++ +L++ + + V +A +A I V
Sbjct: 116 PLLGERVGPRRWVAIGIGLIGVLVVLRPGVDGFISVPGLMVLAAATAYAIAAITVSLLTR 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ + + G + + + G GL + + + +
Sbjct: 176 TDTSQSMVVWFLVIMAIGAGLLAIPGWVPLQLAHAPLIAGMGLAGALGQIALTKAFQLGE 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S + +EY+ + +I + Q D + I+V + +YLL + + K
Sbjct: 236 ASMIAPLEYSGLVWVIGWDLAFWGQLPDGYTWVGAAIIVAS-GLYLLHRERVNRQEPPK 293
Score = 37.2 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 2/147 (1%)
Query: 159 LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
+ + + + AV + A S + A F +VW S
Sbjct: 1 MNLQRSPSRAVTWMVAAVACFSLMDAGMKQLSASYPTLEVTFLRGAASLPFVLVWVLVSA 60
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
G + L G + F + ++ LST + + APLL+ SV +L
Sbjct: 61 GPRSLIPRRWGLHLLRGALGMAMIG--CFVFALRDLPLSTAYTIYFVAPLLIAALSVPLL 118
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + R + GI +I ++V L P V
Sbjct: 119 GERVGPRRWVAIGIGLIGVLVVLRPGV 145
>gi|153953327|ref|YP_001394092.1| transporter protein [Clostridium kluyveri DSM 555]
gi|219853956|ref|YP_002471078.1| hypothetical protein CKR_0613 [Clostridium kluyveri NBRC 12016]
gi|146346208|gb|EDK32744.1| Predicted transporter protein [Clostridium kluyveri DSM 555]
gi|219567680|dbj|BAH05664.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 296
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 93/304 (30%), Gaps = 15/304 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ ++ L + A +LWG T+ L V+ +++ R L + +
Sbjct: 1 MKISKIINKAIIADLSLLFAAMLWGGGYTATKNALNNVTPFYMMAIRFLCAGILISAIFF 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + V L + + L SF V +I
Sbjct: 61 --------KIVIKTSIEDVVRGFVIGIFLFLAFATQTIGLNYTTASKQSFLTSVYVIILP 112
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARK 186
F+ K + +++AL+ ++ + +++L G+ L A
Sbjct: 113 FIYWKIFKTKPKLNVLVSALVSLIGIFMLSLKPGMHLDMTIGDWLTLLSAVLFASHIISI 172
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
S + + + + +++ + F I
Sbjct: 173 ACFARKSNPIILSVLQMFSAGILSIIFAVIFEPNLNKIPRNALFSLSYLIIFSTMVAFLI 232
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ K + VGI+ + + SV LK+ + I+ +++++ + I
Sbjct: 233 QNIAQKYTNPNHVGILLSLESVFGAIFSVIFLKEIFTLNMVLGASIIFLSVIIAEMDFNI 292
Query: 307 NSGK 310
+S K
Sbjct: 293 SSNK 296
>gi|170719839|ref|YP_001747527.1| hypothetical protein PputW619_0653 [Pseudomonas putida W619]
gi|169757842|gb|ACA71158.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
W619]
Length = 306
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 84/285 (29%), Gaps = 4/285 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G Y++WG T L+ + +E + + R L + G+ + + + G +
Sbjct: 11 LIGAFLAL--YLVWGSTYLFIRIGVESWPPMLMAGVRFLIAG-GLLYGFLRWRGVPAPTW 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ A+G L+ S V + T V + G +
Sbjct: 68 PQWRAAGAIGFLLLSCGNGGVTVAEHAGVASGVAALAVATVPLFTLVFGLLFGHRNSRLE 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +L+L S I + A A+ +
Sbjct: 128 WAGIVLGLVGIGLLNLGSNLQASPIGAALILFAAAAWAFGSVWSKSLPLPQGPMASAAQM 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L A+ + + F + Y +K + +
Sbjct: 188 LVGGAVLLLGSALSGERMTQMPTAAGWGALAYLVLFGSILAFSAYMYLLKHVRPAAATSY 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P + ++ + + I + +++ A+V+ LP
Sbjct: 248 AYVNPAVAVLLGIVFAGEQIGAEECLAMAVIISAVVLIGLPQWRR 292
>gi|220932286|ref|YP_002509194.1| Integral membrane protein DUF6 [Halothermothrix orenii H 168]
gi|219993596|gb|ACL70199.1| Integral membrane protein DUF6 [Halothermothrix orenii H 168]
Length = 286
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/276 (9%), Positives = 76/276 (27%), Gaps = 2/276 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A ++ + + + + L V +R+ S + + D
Sbjct: 9 YLILGIAVVILSFSGILIK-VATAPPLIVAFYRMFLSALILTPVFFLKYNNWKIFLDYRP 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + + F+ + + + + +
Sbjct: 68 MLVGLLLAGHFILWITAFEYTSVASAVIFIALQPLFTLLLEFLFAREDMQEGVLIGIVMA 127
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ + ++ L + I L A ++A + F V +
Sbjct: 128 LVGSIIISY-GDLELLFSRVIGDLLAVSASFFAASYLFAGRSLRKKLDYFPYLYVVYSYA 186
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF + G I F+ + ++ ++R + V +
Sbjct: 187 TLFLGIIVLVLDLPLTGYGTINYLCFIGLALGPTLVGHSLLNWSVRRVSSTVVSLAILGE 246
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
P+L + + +L + I I ++ +
Sbjct: 247 PVLTTIFAWLLLNEVITFSNIIGGVFILGGIYRVTF 282
>gi|307254931|ref|ZP_07536752.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307259371|ref|ZP_07541098.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306862119|gb|EFM94092.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866607|gb|EFM98468.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 280
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 107/281 (38%), Gaps = 6/281 (2%)
Query: 33 AYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK---NPK 89
A L+G+ + L ++ + +R++ P + AI+ F + K NP
Sbjct: 3 ANFLFGLGYYFAILLRPLNGESMFGYRIVVLAPFILLAILLFKQTNKFQQLWQKIKQNPP 62
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V +L+ A + F++A Q S Y + P+++V LG + KE L+ +
Sbjct: 63 LVLVLLLLALNTGIQLWLFLWAPNNGQAIEVSIGYLLLPIVAVALGKIVFKEHFTLLKWL 122
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ ++ + +G + +A + L + F
Sbjct: 123 SLGFAVIGVASNIWLTGSFSWATIVAGIGYPLYITLRRYFE--INTLATFFVELLLVMPF 180
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + N FL +GL+N F ++ ++ +G++ Y PL+
Sbjct: 181 AGYFIDQTNMQPILANNQHIYYFLALFGLVNGAAFILYIASSNLLPVNVLGLLGYVEPLV 240
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
M+ S I + +D+ ++ + +A+++ + + +
Sbjct: 241 MLCVSFMI-GEVLDSKSYLLMICLALAIILLTVDNFRLTRR 280
>gi|312112895|ref|YP_004010491.1| hypothetical protein Rvan_0102 [Rhodomicrobium vannielii ATCC
17100]
gi|311218024|gb|ADP69392.1| protein of unknown function DUF6 transmembrane [Rhodomicrobium
vannielii ATCC 17100]
Length = 302
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 82/284 (28%), Gaps = 16/284 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + I W + + + V + + R W+L + F ++
Sbjct: 10 LLMTLTTIFWAGNFVLGRAIAGHVPPITLACLR--WTLATLIFLPFAWTHLKRDGAAI-- 65
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L A + L + + P+ +R+ L
Sbjct: 66 REHWAILLFLGAIGAGAYNTLSYIGLTSTEALNGLVLNAAGPMFIALSAWALFGDRIGRL 125
Query: 147 QIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
QI + +LI+ + ++ ++W+ Y + P S +
Sbjct: 126 QIAGLAAGFVGVLIVVAKGDLASLAAFHFNPGDVFIISSMLSWAIYTACVRLRPSISWQS 185
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F +A + +S G + + + ++ ++
Sbjct: 186 FNFVTYAVAAVGNAPFMAWEWSAGSRPVWDEAAVAAIIYVSIFPSILAYVFYNRSVELMG 245
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ + P+ + + L + + F ++V +++
Sbjct: 246 PANTGMFLFLVPVFGGLLATLALGEQLHLFHAAGFALIVAGVLL 289
>gi|239503035|ref|ZP_04662345.1| DMT family permease [Acinetobacter baumannii AB900]
gi|260557580|ref|ZP_05829794.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
gi|301594506|ref|ZP_07239514.1| DMT family permease [Acinetobacter baumannii AB059]
gi|332875640|ref|ZP_08443452.1| putative membrane protein [Acinetobacter baumannii 6014059]
gi|260408753|gb|EEX02057.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
gi|322506374|gb|ADX01828.1| DMT family permease [Acinetobacter baumannii 1656-2]
gi|332736213|gb|EGJ67228.1| putative membrane protein [Acinetobacter baumannii 6014059]
Length = 306
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 85/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + L
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFLSVWRQRRLVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + + Y F +
Sbjct: 128 FAVFGSILSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKKWQLPLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVLFHLPLIFWFGLDALNAQNAPSAIYAGVFASLIAPLVWMLAVQQLGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + + L + T ++++ +++
Sbjct: 248 RTSIFMNLVPVFTAIIASIWLSEQWTIYHTFGGIMILVGIIM 289
>gi|119775644|ref|YP_928384.1| integral membrane domain-containing protein [Shewanella amazonensis
SB2B]
gi|119768144|gb|ABM00715.1| integral membrane domain protein [Shewanella amazonensis SB2B]
Length = 303
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 92/286 (32%), Gaps = 10/286 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ L+ A +LW + L + S L+++ V+ S+ + + + + +
Sbjct: 6 LAYLYGMAAVLLWSTVATAFKLALAEYSPLQLLFIAVITSILALSVILGFQGKLRQVARQ 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ P +++ A + ++ L L ++L
Sbjct: 66 WQERPLFYL--QTGLLNPFLYYLVLFKAYDLLPAQQALSLNYTWAILLPLLAVPLLGQQL 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLS------LAIAVTWSAYCFARKTIPVGSSEGFF 197
++AAL+ + ++ + S + +A+T + +
Sbjct: 124 RKTDLLAALIAYGGVFVIATGGSLAGFSLSEPTGIVMALTSTLLWCLYWIVNTKDKGDPV 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK-L 256
+ + + + L +V + F ++ +K ++
Sbjct: 184 VSLMLSFLVGLPFVTVAMLVTQGLPTFSGQGLAAAVYVGLFEMGVTFVLWLMALKSSERT 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + + +P+L I +L + I I G+++ A+ +
Sbjct: 244 ANISTLVFLSPVLSIGFIALVLGEDIRLSTFIGLGLILSALALQQW 289
>gi|325179667|emb|CCA14065.1| Drug/Metabolite Transporter (DMT) Superfamily putative [Albugo
laibachii Nc14]
Length = 888
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/331 (8%), Positives = 83/331 (25%), Gaps = 29/331 (8%)
Query: 8 KEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGV 67
++ + + ++G + + A I + VS + R
Sbjct: 540 QDDNLQMMMIVKRRVPIIGYVILVSALIAISSVGVALDMESGVSPFLKLMWRN---GLVF 596
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+ + + + ++ A G ++ +L +
Sbjct: 597 LLTLPLTIFYVPKETKPIWTRHLMLEMLIVGASYAFFIGSYVVSLSLTSVGHATLFNNAH 656
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT--------------LHSGIPLLSLA 173
++ V + + + L I A + ++ G + +
Sbjct: 657 SLLIVLIKLLSGRTVLLFEGIGAIIGVLGGACTTMDTVSVGESRGKTSPTAIGDFVALIG 716
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF- 232
+A+K F + ++ LF + E + +
Sbjct: 717 ALGGAVYLIYAKKMRSKMHILVFLNTLTCVSTCVLFLTLLVRNECVELSMDSHYGIFGWL 776
Query: 233 ----------LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI-LKQP 281
L + + + +K + + I+ P++ +
Sbjct: 777 NPRFNRLGVTLYLIFVCDLIGTTGYITAMKYFEPIVISIVCLLEPIVATFMGILTGFDSI 836
Query: 282 IDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
T+ + +V++ + + + K
Sbjct: 837 PGTLTVVGGSLVLLGTFFVISAQNKHHAREK 867
>gi|228965992|ref|ZP_04127059.1| Transporter, EamA [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228793662|gb|EEM41198.1| Transporter, EamA [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 309
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 92/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++V A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVVVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGMKK 300
>gi|205375313|ref|ZP_03228103.1| hypothetical protein Bcoam_20134 [Bacillus coahuilensis m4-4]
Length = 297
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 84/290 (28%), Gaps = 4/290 (1%)
Query: 29 FVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+F LWG + L+ + V + RV +F + L + K
Sbjct: 8 ALFVLASLWGTSFLFIRIASPAVGPFLTMEIRVFIGFLVMFLLAKGMNKTLQIKKYWKHF 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ L + A +T T+ + +++ +
Sbjct: 68 LIIGTVNAAIPFTLIAIAALELNASMTSILNSTTPLFGALVAWVFLGERFTVQKGIGMAL 127
Query: 148 IIAALLIILSLLIM--TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ ++ ++ + T + +A A + + F + +
Sbjct: 128 GMGGVIALVGWNSIPVTWIVILSASCSILAALSYAIAGVYIKKHLQGVDSFSMSVGQQLA 187
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+L + GE L L + + + Y I+ A + + +
Sbjct: 188 ASLLLFPFIFIPTGE-KTWSPEVVFSLLSLGVLATAIAYLFYFYLIEHAGPTNTLTVTFL 246
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
PL + L +PI + +++ ++ ++ +++ +
Sbjct: 247 VPLFGVFWGAIFLNEPITVGTIVGLALILSSIGFITGAKLVKVSRSEESR 296
Score = 39.1 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 40/128 (31%)
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
A+ V S + + I + S + + F V++ G
Sbjct: 6 MTALFVLASLWGTSFLFIRIASPAVGPFLTMEIRVFIGFLVMFLLAKGMNKTLQIKKYWK 65
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
FLI + + F + + S I+ T PL + + L + + I
Sbjct: 66 HFLIIGTVNAAIPFTLIAIAALELNASMTSILNSTTPLFGALVAWVFLGERFTVQKGIGM 125
Query: 291 GIVVIAMV 298
+ + ++
Sbjct: 126 ALGMGGVI 133
>gi|255007613|ref|ZP_05279739.1| hypothetical protein Bfra3_00642 [Bacteroides fragilis 3_1_12]
gi|313145307|ref|ZP_07807500.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313134074|gb|EFR51434.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 302
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 83/286 (29%), Gaps = 6/286 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F A ++WG+ + L + S L V + R++ + + +
Sbjct: 5 KNLKGHALAFTANVMWGLMSPIGKSALTEFSALSVTTFRMVGAAAAFWILSAFCKQEQVG 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+D LK A + + + + TS + V K
Sbjct: 65 HRDMLKIFFASLFALVFNQGIFIFGLSLTSPIDASIVTTTSPIITMIVAAIYLKEPVTNK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L LI++ T G + + + T+ G S+ +
Sbjct: 125 KVLGIFIGAMGALILILSSQATSAGGGSIWGDLLCMIAQLSFSIYLTVFKGLSQRYSAIT 184
Query: 201 CVLAIPALFYVVWNGFSGGE-----HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + FS + + L + + K +
Sbjct: 185 INKWMFIYASICYIPFSYQDIAGIEWNSISTAAIYQVLYVVLCGSFIAYICIMTAQKLMR 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V + Y P++ ++++ + + + +V + +
Sbjct: 245 PTVVSMYNYVQPIVASIAAILMGIGSFGWEKGVAIALVFLGVYFVT 290
>gi|229194788|ref|ZP_04321576.1| Transporter, EamA [Bacillus cereus m1293]
gi|228588699|gb|EEK46729.1| Transporter, EamA [Bacillus cereus m1293]
Length = 316
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 100/306 (32%), Gaps = 23/306 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K ++ + + F + G + + + L
Sbjct: 74 MNFKKGTGKQ-----LVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQILLAHF 128
Query: 138 -FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ + LN ++I + +++ ++ H GI L L IA +Y
Sbjct: 129 LYKDDALNVRKVIGVSIGFCGVILVNVPSDGSLSFHFGIGSLLLLIAAMLYSYGNILAKE 188
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + ++ + ++ + G F ++ L LI L++ FCI++
Sbjct: 189 GSKTLDVGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSVHAILMLIYLSFLSAAGFCIWN 248
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 249 TIMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
Query: 309 GKNKTK 314
+ + +
Sbjct: 309 MEQEKQ 314
>gi|78184869|ref|YP_377304.1| hypothetical protein Syncc9902_1296 [Synechococcus sp. CC9902]
gi|78169163|gb|ABB26260.1| putative membrane protein [Synechococcus sp. CC9902]
Length = 302
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 86/287 (29%), Gaps = 13/287 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G+ + + + + + + + L + V E++ R + SL +
Sbjct: 12 ASEQAKGSRSLILSSLAFSLMTVCVKQLNGRIPVTEIVLVRAIVSLALTGMGLRLAG--- 68
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
KA G+L ++ F A+ + + P +
Sbjct: 69 ---VKPWGTAKARGLLFARGIAGSIALLCFFQAIEKLPLAAATVLQYTYPTFTALAALFL 125
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGS 192
L E L ++A L+ + + + + A+ A A + V
Sbjct: 126 LGESLRKRIVLAVLMGWVGITFVVQPDWLTGDVQALPLIPALIGILGALFTALAYVSVRR 185
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L V + ++L+G G+ + G++
Sbjct: 186 LSATEHPLVIILYFPLISVPITLPWVIGTGVWPMGMEWIWLLGIGVFTQLGQIWVTDGLR 245
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
R + + Y + + I + G+V+IA ++
Sbjct: 246 RLPAARATSINYIQVVFAASWGWLWFSESISLWQIGGGGLVLIATMI 292
>gi|152975119|ref|YP_001374636.1| hypothetical protein Bcer98_1320 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023871|gb|ABS21641.1| protein of unknown function DUF6 transmembrane [Bacillus
cytotoxicus NVH 391-98]
Length = 301
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 94/299 (31%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +WG T + Q + V+ + R L + + F + FS +S
Sbjct: 2 KKEWIAPFALLFVSFIWGATFVVVQNAMSFVNPFTFNAIRFLCAGIILLFIQILFSKKIS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L + + LL F ++ ++ L +FL
Sbjct: 62 KKQMYCSS----FAGLIVGFFLFAGYLLQTFGLLYTTSSKAGFLTGLSIIMVPILSFIFL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ + +I L + L ++T L I V A FA P
Sbjct: 118 KQKASPFVLIGILTATIGLYLLTAADSFQLNIGDILVLGCAIAFAAHILINGVFSKKISP 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + V + F + + L S F I +
Sbjct: 178 LLLSTSQILSVGVFSTICAFLFEDYEKIFSTSLWTNSAFLFALLATSLFATSIAFFIQTA 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + T + + + M+ LP+
Sbjct: 238 AQKHTSPTRVAIIFAMEPVFAALTGVLVAGEQLSTSAILGCLCIFLGMIFVELPSKAKK 296
>gi|315445892|ref|YP_004078771.1| permease, DMT superfamily [Mycobacterium sp. Spyr1]
gi|315264195|gb|ADU00937.1| predicted permease, DMT superfamily [Mycobacterium sp. Spyr1]
Length = 365
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/317 (8%), Positives = 85/317 (26%), Gaps = 37/317 (11%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + G LF + +G + + + L S ++ R+ +
Sbjct: 12 TQARADHFRSGLLFALASAFAFGCSGPFAKALMTAGWSPTAAVTARLAGGALAMAVFATV 71
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G A ++++ +A F+ A+ + + P++ V
Sbjct: 72 VRPGW----VREARHHARTVVLYGIVPIAGAQLFYFNAVAHLSVGVALLLEYTAPLLVVG 127
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI---MTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ R + + + +L + + + + G+ + +A A
Sbjct: 128 WLWATTRHRPSGMTLAGVVLAVGGITLVLGIIGPGGVAAAHINLAGVGWGLAAAVCAACY 187
Query: 191 GSSE----------------------------GFFIEMCVLAIPALFYVVWNGFSGGEHF 222
F + + +
Sbjct: 188 FLMSDKAGAMSDKEVADGRPPLHPITLAAAGLAFGAVTVAALGFSGLMPLAFTANDAVIA 247
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + + + + GI R + ++ + + ++++ +L + +
Sbjct: 248 GFTTPWIVPVIALALIPTAIAYTLGIVGIARLRPRFASMVGLSEVMFAVLAAWMLLGEGM 307
Query: 283 DTVRTIVFGIVVIAMVV 299
+ I IV+ + +
Sbjct: 308 AAAQVIGGAIVLAGLAL 324
>gi|269960875|ref|ZP_06175245.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834315|gb|EEZ88404.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 286
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 91/276 (32%), Gaps = 10/276 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + + + ++ + + +E +S + + R L SL + +
Sbjct: 2 SPHHLALFLLVIGNLAASLSDVAVKLIEGGISPFQYMFVRQLASLLLILPFYLRQQPDKR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK +++ + + V + + ++ P++ + L +FL
Sbjct: 62 SLKQAPITILRAHLILIGSGCMMVA-------VTHLPLATANAVFYAAPILMLPLSILFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E +I+ L +L++ A+ +A A I V
Sbjct: 115 NEHPPLSKILLTCFGFLGVLVVLRP--DHFHWAALFALGTATTLAMFNILVRKLPSEQSV 172
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L LF + + G ++ + +I + + ++A +
Sbjct: 173 VTTLWWTTLFSLPVSAVLAGFYWQPITWQELALVIASAVCILSYNGLAVLAYQKAPAGEI 232
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ EY+ + + + ++ + D + I ++V+
Sbjct: 233 ALAEYSGLVFVTLFGIWWFDEIPDWLTAIGIIMIVL 268
>gi|237510519|ref|ZP_04523234.1| protein RarD [Burkholderia pseudomallei MSHR346]
gi|235002724|gb|EEP52148.1| protein RarD [Burkholderia pseudomallei MSHR346]
Length = 297
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTGAGEDPQAARGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIIWTAPGALAVVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLARAFASRRLALSLAASAGLLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSALQWLALACAAAGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L +GG + + L G G +++ +
Sbjct: 181 ADSLALFSVE---MLALLPIAAATLAAGGTSVAGRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLGEALSWQQLATYAPIWAAVALTAWHGFLIARR 297
>gi|228991831|ref|ZP_04151768.1| hypothetical protein bpmyx0001_25770 [Bacillus pseudomycoides DSM
12442]
gi|228767912|gb|EEM16538.1| hypothetical protein bpmyx0001_25770 [Bacillus pseudomycoides DSM
12442]
Length = 293
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 90/281 (32%), Gaps = 13/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L + +IS R + +
Sbjct: 9 LMLLLVTFFWGASILLTKVGLNYMQEYNLISLRFIIAFLLSGIVFY--------KHLIKI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + A IL + + F + F +T + L S+FLK+R
Sbjct: 61 DFRTIKYAFILAVILFIVYIFATFGTKYTSVSNAGFLMSLTVIFIPVLSSIFLKQRPEKK 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ +L I+ + ++TL+S G + + + A + +
Sbjct: 121 VILGVVLTIVGIGLLTLNSQLKIGYGDILCILCALFYAVHIIITGTITKQVNSISLGVLQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L LF +++ F L+ + F + + + G++
Sbjct: 181 LGFVGLFSSIFSMFMENPKLPSTVESWFSILVLSVFCTAMAFIVQIIAQQYTSPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++V+ L
Sbjct: 241 FSLEPVFSAGFAFVFTGETLTAKGYLGATLILLSVVIAELD 281
>gi|117620634|ref|YP_857142.1| hypothetical protein AHA_2633 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562041|gb|ABK38989.1| integral membrane protein DUF6 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 346
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 98/295 (33%), Gaps = 15/295 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ + A +LW + + + + V +V+ R+ + + L
Sbjct: 50 RPLPIFTLTLAMLLWSSSFIALKHVLGVWGFGQVLFMRMSVAALC------WLCCYRYLG 103
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + A +++ + AL + P+I + V ++E
Sbjct: 104 NFRYQKGDWRWLALMGALEPCLYFLLEVNALRYTSAGQAGMVCALLPLIVALVAFVLIRE 163
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSS 193
R++ Q++ + I + ++ SG + +A + A ++ + S
Sbjct: 164 RVSRRQLLGFAIAIFGIALLGFGSGTDEFAPNALLGNSLEMAAMFCAATYSVVFKKLCSR 223
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ A + F + + + + ++++ + +
Sbjct: 224 YSVLTLTALQAFVGTLFFAPFAFGEPWPTAWVWQDMAVIVFLGACVTLGAYLLYNWSVTQ 283
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K++ P+ ++ + +L + ++ ++ + G V++ + V LP
Sbjct: 284 VKVTLAAAYVNLIPVFTLLLAYLLLGETLNALQWVACGAVLLGIAVGQLPARRVR 338
>gi|56413098|ref|YP_150173.1| hypothetical protein SPA0880 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362024|ref|YP_002141661.1| hypothetical protein SSPA0820 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56127355|gb|AAV76861.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197093501|emb|CAR58962.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 306
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 63 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 182 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGLMAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + V G++V A+V+ L + +
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPAR 293
>gi|26250715|ref|NP_756755.1| putative transport protein YijE [Escherichia coli CFT073]
gi|91213490|ref|YP_543476.1| transport protein YijE [Escherichia coli UTI89]
gi|110644284|ref|YP_672014.1| transport protein YijE [Escherichia coli 536]
gi|117626213|ref|YP_859536.1| permease [Escherichia coli APEC O1]
gi|227885309|ref|ZP_04003114.1| protein of hypothetical function DUF6 transmembrane [Escherichia
coli 83972]
gi|237702981|ref|ZP_04533462.1| transporter YijE [Escherichia sp. 3_2_53FAA]
gi|331649799|ref|ZP_08350879.1| hypothetical transport protein YijE [Escherichia coli M605]
gi|26111146|gb|AAN83329.1|AE016770_129 Hypothetical transport protein yijE [Escherichia coli CFT073]
gi|91075064|gb|ABE09945.1| hypothetical transport protein YijE [Escherichia coli UTI89]
gi|110345876|gb|ABG72113.1| hypothetical transport protein YijE [Escherichia coli 536]
gi|115515337|gb|ABJ03412.1| predicted permease [Escherichia coli APEC O1]
gi|226902918|gb|EEH89177.1| transporter YijE [Escherichia sp. 3_2_53FAA]
gi|227837685|gb|EEJ48151.1| protein of hypothetical function DUF6 transmembrane [Escherichia
coli 83972]
gi|307556092|gb|ADN48867.1| inner membrane protein [Escherichia coli ABU 83972]
gi|331041432|gb|EGI13582.1| hypothetical transport protein YijE [Escherichia coli M605]
Length = 323
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 41 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 93
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 94 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 153
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 154 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 213
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 214 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 273
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 274 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 311
>gi|46143561|ref|ZP_00204511.1| COG2962: Predicted permeases [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208519|ref|YP_001053744.1| hypothetical protein APL_1045 [Actinobacillus pleuropneumoniae L20]
gi|307250295|ref|ZP_07532248.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307263714|ref|ZP_07545322.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|126097311|gb|ABN74139.1| hypothetical protein APL_1045 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306857677|gb|EFM89780.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306870968|gb|EFN02704.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 280
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 107/281 (38%), Gaps = 6/281 (2%)
Query: 33 AYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK---NPK 89
A L+G+ + L ++ + +R++ P + AI+ F + K NP
Sbjct: 3 ANFLFGLGYYFAILLRPLNGESMFGYRIVVLAPFILLAILLFKQTNKFQQLWQKIKQNPP 62
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V +L+ A + F++A Q S Y + P+++V LG + KE L+ +
Sbjct: 63 LVLVLLLLALNTGIQLWLFLWAPNNGQAIEVSIGYLLLPIVAVALGKIVFKEHFTLLKWL 122
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ ++ + +G + +A + L + F
Sbjct: 123 SLCCAVIGVASNIWLTGSFSWATIVAGVGYPLYITLRRYFE--INTLATFFVELLLVMPF 180
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + N FL +GL+N F ++ ++ +G++ Y PL+
Sbjct: 181 AGYFIAQTDMQPILADNQYIYYFLTLFGLVNGAAFILYIASSNLLPVNVLGLLGYVEPLV 240
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
M+ S I + +D+ ++ + +A+++ + + +
Sbjct: 241 MLCVSFMI-GEVLDSKSYLLMICLALAIILLTVDNFRLTRR 280
>gi|257466400|ref|ZP_05630711.1| hypothetical protein FgonA2_03034 [Fusobacterium gonidiaformans
ATCC 25563]
Length = 321
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 93/295 (31%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ F F A +L+ + +++ L EQ+S + + S + G+ + G
Sbjct: 2 NNKIISIFFAFIAAMLYALNIPFSKLLLEQISPVFMASFLYFGAGIGMLCLSLLKKGNKE 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T K ++F + + L S V + + F
Sbjct: 62 QNKLTKKELPYTLGMIFLD---ILAPISLMVGLKWISPTNASLLNNFEIVATSCIALFFF 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---WSAYCFARKTIPVGSSEGF 196
+E+++ A LLI LS ++++L A+ + S
Sbjct: 119 QEKISSKMWAAILLITLSSVLLSLEEQTNFSFSYGAIFILLACIFWGMENNCTRMLSSKN 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+++ VL + + + LI L + K
Sbjct: 179 IVQIVVLKGICSGFGSFIVAFVIGEHLPHFFLILIILILGFLSYGLSIFFYVKAQKELGA 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P + S I ++ + + I+++ ++ +L T+ K+
Sbjct: 239 AKTSAYYSINPFIGTFLSFLIFQEKLSKYYFLALFIMILGTILVILDTLFIKHKH 293
>gi|257456949|ref|ZP_05622130.1| transporter [Treponema vincentii ATCC 35580]
gi|257445658|gb|EEV20720.1| transporter [Treponema vincentii ATCC 35580]
Length = 293
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 82/285 (28%), Gaps = 14/285 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + + A ILWG L L + +++++ R + +FFA
Sbjct: 2 NKELLGVVGLLSATILWGAGFLAVDLALTAFTPMQIMAVRFFLASIIMFFAA-------- 53
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ V + L + + L +F V FL
Sbjct: 54 RKSLQSVLKQEVIAGIIMGLCLFLAFTLQTIGLKFSTLSNNAFLTATNVVFVPFLVWGAY 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSE 194
K+R + +L I +TL + + A ++ F
Sbjct: 114 KKRPTLSEFAGMILAIAGAGFLTLANDFSIGIGDTLSLAGAFFFACQVFFTGKYAPHYRT 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + L + G L + + + + + +
Sbjct: 174 DILSFVQITTAFVLSCISLPFTGGMAGIVWNKNALLSILYLGIVSTAITYFLQTASQRYV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
K I+ + + SV ++ + + +++ A+++
Sbjct: 234 KQVQAVIILSLEAVFATIFSVLLIHERLSFRVLCGAVLILSAVLI 278
>gi|110680815|ref|YP_683822.1| integral membrane protein DUF6, putative [Roseobacter denitrificans
OCh 114]
gi|109456931|gb|ABG33136.1| integral membrane protein DUF6, putative [Roseobacter denitrificans
OCh 114]
Length = 296
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 93/301 (30%), Gaps = 18/301 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + A +L + + + + + ++ + V R+L + L
Sbjct: 1 MICMIVAMLLLPLGDTFAKLISETLNPVGVTLCRILAQALFLVPVAYVLRHRLRGA---- 56
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ S +L V I A +FV P+I L + L E
Sbjct: 57 ---MFSPVVALSGGLLIVSLTSLISAFAVMPITTALAIFFVEPLILTILAAFLLGETAGP 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--------- 196
++ A + ++ +I+ + SA+ +A I + +
Sbjct: 114 RRLAAVGVGLIGAMIVIRPGFDVYGWATLLPLISAFAYALNMIVLKKATVTRSGLTVQCG 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L + L + + L ++ G + + F + + + A
Sbjct: 174 TTIYAGLGLILLSAGLGTTGMTAFIPAASDTSTWLLILCAGAVAATSFVLIAEAYRSADA 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKTKK 315
+ + +Y + + DT+ I I++ + ++ ++ + K+
Sbjct: 234 TALAPFQYLEIVTATALGFLVFGDFPDTLTWIGVAIILGSGIYIFHREGQSDTAAPRRKR 293
Query: 316 S 316
+
Sbjct: 294 A 294
>gi|326797120|ref|YP_004314940.1| hypothetical protein Marme_3894 [Marinomonas mediterranea MMB-1]
gi|326547884|gb|ADZ93104.1| protein of unknown function DUF6 transmembrane [Marinomonas
mediterranea MMB-1]
Length = 288
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 89/282 (31%), Gaps = 7/282 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
N + T + I + L E S +++ R + + P F +Y
Sbjct: 1 MPNLNRDTNTAIFMMCTGVACLSINDAIAKILMEHYSPFQILFIRTVLAFPFALFLALYS 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G +L +L +ATI+ ++ + FV P+ +
Sbjct: 61 GGTSALRSYKPAVHVVRSLLWIAATIMF------FTSVKYLDLAKATALIFVAPLFIAII 114
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
SVFLKE ++ + +A L + +LI+ I ++ +A +A + +
Sbjct: 115 SSVFLKEPVSRAKWLAILAGFVGMLIIVRPGLIAFNAVTALPIATAVVYALLMLGARQID 174
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + +G + + D G + + +
Sbjct: 175 PRESVWTQMLYLTGISGILSGLLVPFVWTAIRLEDLWLFAGITAFGITGMALMTQAFRLG 234
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ ++YT L + + DT I ++V +
Sbjct: 235 SAVVIAPLDYTGLLWATLLGWLFWTEMPDTTTLIGAIVIVAS 276
>gi|302550000|ref|ZP_07302342.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302467618|gb|EFL30711.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length = 318
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 75/276 (27%), Gaps = 6/276 (2%)
Query: 34 YILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + +V R+++ + A+ L T +
Sbjct: 38 SLIWGFSFLLIKVGTHAYAPFQVTLGRLVFGTAVLAAAMAVRRERLPRGARTWGHLAVAA 97
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ + + + + + V L + L
Sbjct: 98 FLLNALPFSLFAYAELTIPSTLAGICNATSPLWGMTLSLVALSEDRPTRVRVAGLGLGFL 157
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L G+ A+A+ S + G + L +
Sbjct: 158 GVLTVLGAWQGFHGLDAGGTALALLASLSYPIGWIYVRRTLAGAGHSHLSMTGAQLLLAT 217
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ V L +P L + + +T ++ Y P
Sbjct: 218 VQLAVVTPLFTTLPTNLSPVPLLAIAALGALGTGLAVLLQYGLVAEVGPTTAQMVTYFIP 277
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ + V +L +P+ + IV+ + +
Sbjct: 278 VIATAAGVALLGEPLAWSTPVGAVIVLTGAALTQVR 313
>gi|228928117|ref|ZP_04091161.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229122612|ref|ZP_04251823.1| Transporter, EamA [Bacillus cereus 95/8201]
gi|228660864|gb|EEL16493.1| Transporter, EamA [Bacillus cereus 95/8201]
gi|228831534|gb|EEM77127.1| Transporter, EamA [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 309
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 91/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTLSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|229177469|ref|ZP_04304850.1| hypothetical protein bcere0005_8390 [Bacillus cereus 172560W]
gi|228606032|gb|EEK63472.1| hypothetical protein bcere0005_8390 [Bacillus cereus 172560W]
Length = 295
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 87/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + + + ++++ + T+K
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFKTVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVVQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 185 GLFSLIFSFIIETPKLPSTTNSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ L
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILLSVLIAELD 281
>gi|184159784|ref|YP_001848123.1| DMT family permease [Acinetobacter baumannii ACICU]
gi|183211378|gb|ACC58776.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Acinetobacter baumannii ACICU]
gi|322509697|gb|ADX05151.1| putative membrane protein [Acinetobacter baumannii 1656-2]
Length = 295
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLLK----DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + A + I ++ + I + + ++F
Sbjct: 62 KIAFISSTPSKLSVFAQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 122 GRFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLINLHSITFNSDIILGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 288
>gi|28900258|ref|NP_799913.1| hypothetical protein VPA0403 [Vibrio parahaemolyticus RIMD 2210633]
gi|260361620|ref|ZP_05774647.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus K5030]
gi|260880816|ref|ZP_05893171.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AN-5034]
gi|260896473|ref|ZP_05904969.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus Peru-466]
gi|260899513|ref|ZP_05907908.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ4037]
gi|28808569|dbj|BAC61746.1| putative membrane protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089250|gb|EFO38945.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus Peru-466]
gi|308092597|gb|EFO42292.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AN-5034]
gi|308109164|gb|EFO46704.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ4037]
gi|308112765|gb|EFO50305.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus K5030]
Length = 302
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 83/293 (28%), Gaps = 17/293 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + + + +
Sbjct: 3 YLLPFFTVMIWGGNSIVNKMAASTIEPSAMSFYRWFVAMVLLTPFCL----PAVIKQRHV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT + + P+ISVFL L + ++
Sbjct: 59 IRPYLTKLAFLALLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSVSM 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
L I+ ++ + L M H + +A A
Sbjct: 119 LSIVGGVISLGGLAFMLGHGDVTYFLHQDMTQGDSLMLLAALVYAAYCVLLKRWKMPFNS 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + S L + F ++ I
Sbjct: 179 LTLVYMQGFFSVIMLTPLWLSSEQLL--PSQEALPLIAYAGIAASIFAPLMWVKAIDLIG 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ + + +L + I I +V+ +++ +
Sbjct: 237 ADSSAMFMNLMPVVSVALASTLLGEEIHVYHIIGGLMVISGVILSQIKVRKKQ 289
>gi|53716149|ref|YP_106479.1| rarD protein [Burkholderia mallei ATCC 23344]
gi|67639537|ref|ZP_00438386.1| protein RarD [Burkholderia mallei GB8 horse 4]
gi|124382165|ref|YP_001025062.1| rarD protein [Burkholderia mallei NCTC 10229]
gi|126446382|ref|YP_001079405.1| RarD protein [Burkholderia mallei NCTC 10247]
gi|254176551|ref|ZP_04883209.1| RarD protein [Burkholderia mallei ATCC 10399]
gi|254203487|ref|ZP_04909848.1| RarD protein [Burkholderia mallei FMH]
gi|254205365|ref|ZP_04911718.1| RarD protein [Burkholderia mallei JHU]
gi|254356170|ref|ZP_04972447.1| RarD protein [Burkholderia mallei 2002721280]
gi|52422119|gb|AAU45689.1| rarD protein [Burkholderia mallei ATCC 23344]
gi|126239236|gb|ABO02348.1| protein RarD [Burkholderia mallei NCTC 10247]
gi|147745726|gb|EDK52805.1| RarD protein [Burkholderia mallei FMH]
gi|147754951|gb|EDK62015.1| RarD protein [Burkholderia mallei JHU]
gi|148025153|gb|EDK83322.1| RarD protein [Burkholderia mallei 2002721280]
gi|160697593|gb|EDP87563.1| RarD protein [Burkholderia mallei ATCC 10399]
gi|238520087|gb|EEP83550.1| protein RarD [Burkholderia mallei GB8 horse 4]
gi|261826681|gb|ABM98593.2| rarD protein [Burkholderia mallei NCTC 10229]
Length = 297
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTGAGDDPQAARGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIIWTAPGALAVVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLARAFASRRLALSLAASAGLLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSALQWLALACAAAGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L +GG + + L G G +++ +
Sbjct: 181 ADSLALFSVE---MLALLPIAAAMLAAGGTSVARRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLGEALSWQQLATYAPIWAAVALTAWHGFLIARR 297
>gi|157827981|ref|YP_001494223.1| hypothetical protein A1G_00645 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932673|ref|YP_001649462.1| transporter, drug/metabolite exporter family [Rickettsia rickettsii
str. Iowa]
gi|157800462|gb|ABV75715.1| hypothetical protein A1G_00645 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907760|gb|ABY72056.1| transporter, drug/metabolite exporter family [Rickettsia rickettsii
str. Iowa]
Length = 294
Score = 66.9 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 90/297 (30%), Gaps = 8/297 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + + +++L + EV R +S + +VY+
Sbjct: 1 MNDALKTYLTGIGWFLLSLVSSSANDVISKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + +L + Y L + F P+ ++ L
Sbjct: 61 GKN-------TLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E + + + ++ + L+I + +A FA I
Sbjct: 114 AVFFLNENIIWPRWVVTVVGFIGLVITLKPHAEDFNPEILYFVLAAISFAMLDIINKKFV 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ + + +++ + + L G S +
Sbjct: 174 IKESMISMLFYSAIVTAIVSLPVALQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y ++ ++++ FI + DT I++ + + +
Sbjct: 234 DATATAPYRYLELVISVIAAYFIFNEFPDTSTLHGAVIIIPTTLFIIYSEKKAMNRK 290
>gi|302335163|ref|YP_003800370.1| protein of unknown function DUF6 transmembrane [Olsenella uli DSM
7084]
gi|301319003|gb|ADK67490.1| protein of unknown function DUF6 transmembrane [Olsenella uli DSM
7084]
Length = 299
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 91/289 (31%), Gaps = 17/289 (5%)
Query: 31 FCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A +L+G + + + +++ R + +V G + + +P+
Sbjct: 9 LAALLLFGSNGIVASSIA-LPSHQIVLLRTFLGALSLAALVVLGRGAGPIFQ----HPRQ 63
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
G L S L V W F A + S +Y+ PVI + L ERL ++
Sbjct: 64 AGALAVSGAALGVGWLFLFEAYRLAGVGVASLAYYCGPVIVMILSPFLFAERLGAAKVAG 123
Query: 151 ALLIILSLLIMTLHSGIPLL------------SLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + ++ G + A VT+S + + S +
Sbjct: 124 IVSAVCGASLVVAQGGGKMDALGLLLGALSAVMYAAMVTFSRRSPDIQGLAAASVQLVAS 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V A + ++ +G L + L + ++ I +
Sbjct: 184 FAVVAAYQLVRTLLSPAEAGETLSCLAQVDWGAVLTLGLVNTGLGCYLYFSSIGTLPVHR 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V I Y PL + S L + + R + ++V V L
Sbjct: 244 VAIWGYLEPLSAVALSAVALGEAVTMGRVLGAMLIVGGAVASELVGRRR 292
>gi|148547548|ref|YP_001267650.1| transporter DMT superfamily protein [Pseudomonas putida F1]
gi|148511606|gb|ABQ78466.1| RarD protein, DMT superfamily transporter [Pseudomonas putida F1]
Length = 295
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 106/293 (36%), Gaps = 5/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A L+ + YT L+ + E+ R L +LP + ++ + +
Sbjct: 3 KGIVSSVMASCLFAVMYFYTSLLKPLDGEEIFGWRTLLTLPCLTLFMLVSKDWKRVGELM 62
Query: 85 LKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + +V ++ ++ V F++A L + S YF+ P+ V G + E
Sbjct: 63 GRVKRTPVLLLGMVGTSWLMGVQLWLFLWAPLHGRSLEVSMGYFLLPLAMVLTGRLVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ +A L + +G + F + G
Sbjct: 123 RLSRLQTVAVACAALGVGHELYQNGSFAWETLLVTIGYPVYFVLRRRCRTDHLGGLWCDM 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P Y V + + G +++ + + S G+
Sbjct: 183 CLLLPWALYFVIQSPLSSADLQAHP-GLYVLVPILGAISASALIAYVLASRMLPFSLFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++ ++ + + I + + + + A++V +L + + + +
Sbjct: 242 LSYVEPVLLVGVALLLG-ETIGPDQWLTYLPIWAAVLVLVLEGFKHLLRQRRR 293
>gi|71905739|ref|YP_283326.1| hypothetical protein Daro_0097 [Dechloromonas aromatica RCB]
gi|71845360|gb|AAZ44856.1| Protein of unknown function DUF6, transmembrane [Dechloromonas
aromatica RCB]
Length = 304
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 84/285 (29%), Gaps = 16/285 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A +WG T + + + Q + L V S R + + + + G K
Sbjct: 13 LVAAMFMWGGTWIAGRIIAQELSAPLAVASIRFVVTALALAGFALLTGKGAPAPKT---T 69
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + + ++ F + L + + PV+ V +F ER+N +
Sbjct: 70 REWGVVSGLGFFGIFLYGLCFFFGLQHITAGRGALVVALNPVVIVLAAWLFGHERMNRRK 129
Query: 148 IIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + + + L + + L + ++W+AY F + S
Sbjct: 130 ALGSAIALAGCLTVIGNGNPLALVEGTVGIGEWLIVGCVMSWTAYTFIGRMATRTLSPLA 189
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L L + T + + F+ +
Sbjct: 190 TTLYASLIGALLLGLAALVQGDIAPASWSWRVWTGLFFLAIFGTAIAYTWFTEAVHTLGA 249
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P+ ++ + +L + + +V+ + +
Sbjct: 250 GHASVFINLVPVFAVLQAALLLDERLGLPVLFGGLLVIAGVWLTT 294
>gi|99081805|ref|YP_613959.1| hypothetical protein TM1040_1965 [Ruegeria sp. TM1040]
gi|99038085|gb|ABF64697.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 324
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/309 (13%), Positives = 97/309 (31%), Gaps = 16/309 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
+ + + ++G + L + + L + V +++ R + +
Sbjct: 6 ATPDTTDRPLLGIALMLGFCALIPLGDAVAKLLSTRIPVGQIVFVRFAAQGVILAPVALM 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L L + L +L AL FV P I +
Sbjct: 66 LGISLRLPRRILPIVLLRTLLQMGGI------TAMFMALRFLPLADAVAIAFVMPFIMLL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
LG LKE + +++A ++ L++ S + A+ A FA + +
Sbjct: 120 LGKYVLKEEVGLRRLLACVVGFAGTLLVIQPSFAAVGLNALWPLAVAVIFAVFMMVTRTI 179
Query: 194 EGFFIEMCV---------LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + + LF + L P+ L+ GL +
Sbjct: 180 ARDTDPIAIQAVSGGIASVLMAILFVLGAQFEVAELATNLPARPEINLLLLAGLFGTIAH 239
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ ++ A ST+ M+Y + + + +T+ + + A + ++
Sbjct: 240 LLMTWSLRYAPTSTLASMQYLEIPVAVFVGWLFFAELPNTIAACGIALTMAAGLYAVMRE 299
Query: 305 VINSGKNKT 313
S +
Sbjct: 300 RQVSRAARK 308
>gi|229161941|ref|ZP_04289918.1| Transporter, EamA [Bacillus cereus R309803]
gi|228621548|gb|EEK78397.1| Transporter, EamA [Bacillus cereus R309803]
Length = 309
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 91/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTPSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGMKK 300
>gi|228470892|ref|ZP_04055737.1| membrane protein containing DUF6 [Porphyromonas uenonis 60-3]
gi|228307289|gb|EEK16303.1| membrane protein containing DUF6 [Porphyromonas uenonis 60-3]
Length = 303
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 99/300 (33%), Gaps = 17/300 (5%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + C I++GI +T+ L ++ + R L + + A ++ LKD
Sbjct: 9 LVMLCVTIIFGINGPFTKALLGGGLTPYTHMFCRFLGATILFWIASIWVPRERINLKDWG 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K M + S T + + G F + S + P++++ L +V LKE +
Sbjct: 69 K------MALASLTGIFFNQGLFAIGMSMTSPVNQSLVATLGPIVTMLLAAVVLKEPITR 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L+ I + L++ +G + A I + S + + + +
Sbjct: 123 LKGIGVFVGASGALLLISTNGSSTAGSTLGDLICAIATISYAIYLTSFKALIQKYHPVTL 182
Query: 206 PALFYVV---------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+V+ E + + + + +
Sbjct: 183 MKWLFVISLLGSAPLGIRDMMRTEWSSFDATFYGQLAFVVVGATFVAYLLLLFAQRGLRP 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ V I Y P++ + +V + + + + ++++ + + + ++
Sbjct: 243 TVVSIYNYGIPVIASMLAVMMGQDQLTLTKVASAVLILLGVFMVTRSKSRQQLLREHLRN 302
>gi|114462394|gb|ABI75130.1| permease [Anabaena circinalis AWQC131C]
Length = 318
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/289 (11%), Positives = 83/289 (28%), Gaps = 7/289 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + ++G L + A +++ T+ + +S +++ R + +
Sbjct: 19 TTSAPENNRYILGVLLIILATLVYSSILPITKGLITNISKEVLMAVRFTMAAVVFTPFL- 77
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+L +++ +G+L F + A A S + + + +
Sbjct: 78 -----RNLNIPLVRDGAIMGLLSFGMYVSATSGLETFSANRGAFTLGISVIFVMLFDLLL 132
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L ++ +G LL + +
Sbjct: 133 GKRIAPRAIVGATLAFSGIGVMFWGSGESLNGAGWLLLCALLNSAYLIAIQQFVQRHPTV 192
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
L+ N+ + + + G
Sbjct: 193 QLVAVGLWVPAVAGLLWAAPELTGHFEAIVGSLNVNLGSLIYLVVVDTIVFTWLEMIGQH 252
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V I++ PL+ + S ++L + +T I G+V+ AM++ +
Sbjct: 253 WIPATEVAILQTIEPLMAAIISFWLLGETFETHDFIGAGMVLGAMILVV 301
>gi|308802109|ref|XP_003078368.1| Dehydrogenases with different specificities (related to short-chain
alcohol dehydrogenases) (ISS) [Ostreococcus tauri]
gi|116056820|emb|CAL53109.1| Dehydrogenases with different specificities (related to short-chain
alcohol dehydrogenases) (ISS) [Ostreococcus tauri]
Length = 1419
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/267 (11%), Positives = 85/267 (31%), Gaps = 15/267 (5%)
Query: 28 LFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL--SLLK 82
+++ A GI+ L + + R+ + + + S +
Sbjct: 400 IWIVIACATIGISFAGVLLQNELYETPPITRACWRLTLTTFFLAPMGAWEYRRWESSAER 459
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D ++ K G+L+ S L VH+ ++ +L + +P++ + ++F + R
Sbjct: 460 DKMRAGKTWGILLGSGFALGVHFAAWVASLDMTSLAHSLLFVTTSPLLILVENAIFRRHR 519
Query: 143 LNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+++ + ++ I L A+A+ + C + +
Sbjct: 520 PTNMETAGVFIGLVGAGITLLDIRDDKEVTAKGDALAFLGAVAIVFHIECGRTLRTWMPT 579
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ F + A+ + + + + + F++ + F++ +
Sbjct: 580 TVYAFPVTLIAAVFLALFALVFDEREPVFGWASSAKISWFVLLAFVSGIIGHAGFNFALG 639
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILK 279
V I P++ +
Sbjct: 640 YVSSLVVSISTTMEPVIGTIIGFLTYG 666
>gi|15889477|ref|NP_355158.1| permease [Agrobacterium tumefaciens str. C58]
gi|15157347|gb|AAK87943.1| permease [Agrobacterium tumefaciens str. C58]
Length = 300
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 87/284 (30%), Gaps = 10/284 (3%)
Query: 36 LWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + + + + R + V + + L + +G
Sbjct: 16 IWGGGFVAQSSAMSSIGPFWFVGLRFAIAAIAVLPFALMETRSLKSPP----RRREIGSF 71
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ L LLT +SF + + + V + + + AL++
Sbjct: 72 ILVGLALFGGATTQQVGLLTTTVTNSSFLTGLYVIFVPVIAVVLYRRHPHWVVWPCALMM 131
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPALF 209
+ + +++ + L + I A+ +A + G + A+ +L
Sbjct: 132 LGGIFLLSGGAFETLTTGDILSIICAFFWAIQITLAGRFVSESGRPLALSFTQFAVCSLL 191
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ L + + F + G + I + L
Sbjct: 192 SCMIGVVFEPISMAAIEASMMEILYVGLVSSGLAFVLQVIGQRYTTAPQAAIFLSSEALF 251
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + LK+ I + + I+ +A+++ L + + KT
Sbjct: 252 GALMASIFLKETISSAGYVGCLIIFVAILIVELVPELTRKRQKT 295
>gi|26989591|ref|NP_745016.1| hypothetical protein PP_2872 [Pseudomonas putida KT2440]
gi|24984471|gb|AAN68480.1|AE016480_7 membrane protein, putative [Pseudomonas putida KT2440]
Length = 326
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 82/302 (27%), Gaps = 22/302 (7%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ L + WG+ + + L+ + + + + R L +
Sbjct: 35 LKDLLIALVVIVAWGVNFVVIKVGLDGLPPMLLGALRFLLVAFPAILLV----------- 83
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
K P + + L F L S ++ ++FL ER
Sbjct: 84 RRPKLPWRWLIAYGATISLGQFAFLFQAMYSGMPPGLASLILQSQAFFTLGFAALFLGER 143
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L ++ L+ L ++ G + LA+ +T + G + +
Sbjct: 144 LRLASVLGLLVAAGGLALIGSEDGGHVPMLALVLTLCGGAMWGLGNIITRRFGSVDLVAL 203
Query: 203 LAIPALFYVVWNGFSGGEHFFL----------GNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ L + + + ++S +
Sbjct: 204 VIWGGLIPPLPFLALSWWLEGPERIGHALANISWSSVLALAYLAFVATMLGYSLWSKLLS 263
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
R V P++ + SS +L + + + +V+ ++V + I
Sbjct: 264 RHPAGKVAPFSLLVPVIGLSSSALLLGERLTATQGWGALLVMAGLLVNVFGARIGQRLRA 323
Query: 313 TK 314
Sbjct: 324 AN 325
>gi|89095021|ref|ZP_01167950.1| membrane protein [Oceanospirillum sp. MED92]
gi|89080729|gb|EAR59972.1| membrane protein [Oceanospirillum sp. MED92]
Length = 318
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 85/293 (29%), Gaps = 22/293 (7%)
Query: 34 YILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + + + R L + + + + + +G
Sbjct: 17 SFVWGAEFVLIDMAVAIMPTHSFNTFRFLIAALSLLPLLWIAKEQIRSSQFWK----LLG 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + + L F + + +G + ++++ + L
Sbjct: 73 AGLLLGFLLFIGFYTQTEGLRYTSVSNAGFITGLNVPLVPVIGYLLFRKQVGKHVWLGIL 132
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT-----------------IPVGSSEG 195
L L ++T+ + L + V A+ FA I + +
Sbjct: 133 AASLGLYLLTMGGDLELNQGDLLVLTCAFAFAAHIVLTGRFVNDLPVVTLSIIQLTAVAI 192
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L+ FY + I LI ++ + S +
Sbjct: 193 YSTLAAWLSPEPAFYYPEATPTSWLEQLNQPIVIWALLIAGLFGTAYAYWAQSACQTILE 252
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V ++ T P+ V++ L + + + G+++ M++ L
Sbjct: 253 PHKVALVFATEPVFAHVTAWIFLDEHLGPQGFVGAGLIICGMLLSELGDRRKK 305
>gi|88799528|ref|ZP_01115105.1| hypothetical protein MED297_04067 [Reinekea sp. MED297]
gi|88777838|gb|EAR09036.1| hypothetical protein MED297_04067 [Reinekea sp. MED297]
Length = 298
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 86/283 (30%), Gaps = 18/283 (6%)
Query: 29 FVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
F+ + + + + + + + +LE+++ R L SL + I K
Sbjct: 17 FMLLSSLGFALMSACVKAVGTTGLPILEIVAARALISLIISYLDI--------RRKHLPL 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
L V Y++ T + + P + L +FLKER++
Sbjct: 69 LGNNRRFLALRGVFGTVGLIAVFYSVTTLPIAQATLLQYTHPTFTAILALIFLKERVHLS 128
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVT--------WSAYCFARKTIPVGSSEGFFI 198
++ L L L+++T + P L+ ++ A A + S
Sbjct: 129 TVLCIALSFLGLVVVTAPNWTPTLTAQMSWLSLSAALTGAFASACAYVVVRKLSQTEDAS 188
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + F V + F + + L+ G+ ++ +
Sbjct: 189 VIILYFPMIAFPVSAFLLLIRDEFVVPTLYQFGMLLLIGVFVQIGQWALTHAMASDNAGK 248
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
V Y L ++ + + +++ +
Sbjct: 249 VSAYGYIQVLFAVLLGLVFFAESPTLWTLSGGLLILAGAFINT 291
Score = 36.4 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%)
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
FL G+ + Y + ++ +++YT P + ++ LK+ + +
Sbjct: 75 FLALRGVFGTVGLIAVFYSVTTLPIAQATLLQYTHPTFTAILALIFLKERVHLSTVLCIA 134
Query: 292 IVVIAMVVYLLPTV 305
+ + +VV P
Sbjct: 135 LSFLGLVVVTAPNW 148
>gi|86139802|ref|ZP_01058368.1| membrane protein, putative [Roseobacter sp. MED193]
gi|85823431|gb|EAQ43640.1| membrane protein, putative [Roseobacter sp. MED193]
Length = 299
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 92/295 (31%), Gaps = 5/295 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
S MG L + A I++ + ++ L + V+ R + V F +
Sbjct: 8 TTPQSNNVPMGILLMIGATIVFALQDGISRHLAGTYNTYMVVMVRYWFFAAFVLFLAMRA 67
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
GG+ + +G+ +F +L +Y + + P++ L
Sbjct: 68 PGGIRSV----ARTSQLGLQIFRGVLLVAEICVAVYGFTLLGLVESQAVFICYPLLVAAL 123
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L E + + A + ++ +LI+ A+ SA FA + +
Sbjct: 124 SGPVLGESVGWRRWAAIGVGLIGVLIILQPGVGVFDPAALIPFASALMFAVYGLVTRYAA 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +V+ G + + D L++ + + + A
Sbjct: 184 RRDSTATSFFWTGIAGMVFMTSIGIWFWEPMSQNDWLWMALLCVSGVTGHWLLIKCYEMA 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ S V Y + + V I + I I++ A + L +
Sbjct: 244 EASAVQPFAYFHLIWAAILGVSIFGEVIRLNVATGAAIIIAAGLFTLWRESRKAR 298
>gi|326804080|ref|YP_004321898.1| hypothetical protein HMPREF9243_1762 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651559|gb|AEA01742.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 318
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 99/281 (35%), Gaps = 23/281 (8%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
LWG + + + V+ +++ R +S+ + AI+++ + K+ LK+ ++
Sbjct: 31 AFLWGSSLTVVKGAQDYVNPNMILAIR--FSVAALVLAIIFWKKIRDMTKEDLKSGVSI- 87
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + + + ++F V+ F+ + LK R + +IAA
Sbjct: 88 -----GVFLFIAYSIQTVGVGYTDPGRSAFLSASYCVLVPFISWIVLKNRPDKFNMIAAA 142
Query: 153 LIILSLLIMTLHSGIPLLSLA--------------IAVTWSAYCFARKTIPVGSSEGFFI 198
I+ + +++ G L + ++++ A G
Sbjct: 143 FCIVGIYFVSMAGGAENSVLGQGREAILGDALALLSGLFFASHIVAVTKFSKGKDPYLMT 202
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + L + F + +G + + + G K ++
Sbjct: 203 ILQFITAAVLSGLTTLFFEDNSNLVIGQRTFIELAYLAIMCTAVALLFQNIGQKYTDETS 262
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ + I+ V + + + +TI F ++ +A+++
Sbjct: 263 AALILSLESVFGILIPVALGVETLTVYKTIGFVMIFVAILI 303
>gi|242238434|ref|YP_002986615.1| hypothetical protein Dd703_0987 [Dickeya dadantii Ech703]
gi|242130491|gb|ACS84793.1| protein of unknown function DUF6 transmembrane [Dickeya dadantii
Ech703]
Length = 310
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 92/304 (30%), Gaps = 18/304 (5%)
Query: 19 ASLPTMMGTLFVFCAY-ILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
A P+ L + A +LW + + + V + + R WS+ +
Sbjct: 11 ARKPSRWLVLLIIVAPPLLWAGNFIIGRAIRDWVPPVTLTLAR--WSIALLCILPFALKH 68
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ L + + +L S + + L G P + + LG
Sbjct: 69 LRHDARYYLSHLPLMILLSVSGVM--AFSLCVYFGLHYTSGTNGLLLNSCIPALIMLLGR 126
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFA 184
+F + L Q+ L+ + +L + G LL A++ +
Sbjct: 127 LFYGQMLQMRQLAGMLVSFVGVLAIIFKGEPAGLLALSFSVGDLLLLAAMSSFACYSLWL 186
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
RK + G ++ + A F + + + + +
Sbjct: 187 RKVPAEINRTGLLAVQILITVIATFPLWIIEHTAAAAAVWNGFTLAAVVFLGIFPSLIAY 246
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
FS + + G++ + P+ ++ S+ L + + + ++ + +
Sbjct: 247 LFFSRCVDMFGPARAGLIIHLIPVFGVLLSMLFLSESLHLYQVAGITAILAGIGFASVKR 306
Query: 305 VINS 308
I
Sbjct: 307 GITR 310
>gi|228997949|ref|ZP_04157551.1| hypothetical protein bmyco0003_25190 [Bacillus mycoides Rock3-17]
gi|228761824|gb|EEM10768.1| hypothetical protein bmyco0003_25190 [Bacillus mycoides Rock3-17]
Length = 293
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 90/281 (32%), Gaps = 13/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L + +IS R + +
Sbjct: 9 LMLLLVTFFWGASILLTKVGLNYMQEYNLISLRFIIAFLLSGIVFY--------KHLIKI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + A IL + + F + F +T + L SVFLK+R
Sbjct: 61 DFRTIKYAFILAVILFIVYIFATFGTKYTSVSNAGFLMSLTVIFIPVLSSVFLKQRPEKK 120
Query: 147 QIIAALLIILSLLIMTLHS----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I+ +L I+ + ++TL+S G + + + A + +
Sbjct: 121 VILGVVLTIVGIGLLTLNSQLKIGYGDILCILCALFYAVHIIITGTITKQVNSISLGVLQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L LF +++ F L+ + F + + + G++
Sbjct: 181 LGFVGLFSSIFSMFMENPKLPSTVESWFSILVLSIFCTAMAFIVQIIAQQYTSPTHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++V+ L
Sbjct: 241 FSLEPVFSAGFAFVFTGETLTAKGYLGATLILLSVVIAELD 281
>gi|229068603|ref|ZP_04201903.1| hypothetical protein bcere0025_8160 [Bacillus cereus F65185]
gi|229078258|ref|ZP_04210823.1| hypothetical protein bcere0023_9300 [Bacillus cereus Rock4-2]
gi|228705058|gb|EEL57479.1| hypothetical protein bcere0023_9300 [Bacillus cereus Rock4-2]
gi|228714539|gb|EEL66414.1| hypothetical protein bcere0025_8160 [Bacillus cereus F65185]
Length = 295
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 87/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + + + ++++ + T+K
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFKTVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVVQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 185 GLFSLIFSFIIETPKLPSTTNSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ L
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILLSVLIAELD 281
>gi|223041717|ref|ZP_03611911.1| hypothetical protein AM202_0324 [Actinobacillus minor 202]
gi|223017461|gb|EEF15878.1| hypothetical protein AM202_0324 [Actinobacillus minor 202]
Length = 300
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 92/298 (30%), Gaps = 20/298 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + +G L + CA WG + + L V + + R + +++
Sbjct: 2 SKNPKLHLGYLSLVCATAFWGGNFVLGKLLSNAVPPITLTFLRWFPA----LLILLFCFS 57
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++ + + + + L S V PV+ + L
Sbjct: 58 RPTVKAWHSLKSSLGIIWLLGILGVVIFTASLYQGLQKTTALNASLYLAVVPVLVLLLNL 117
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGI---------------PLLSLAIAVTWSAY 181
+ +E + + ++ A+L ++ ++ + +++ AV
Sbjct: 118 LIFRESIRPIILLGAILSLIGVVWLLSQGEWQRLLHLELNYGDLWAMGSAMSWAVYCCVI 177
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
F + I + + VL++ F S L +
Sbjct: 178 QFKPQNISNTVFLTMLVGLAVLSLLPAFIYELCQESAKLLPNLTASQWGGIAYLVIGPSI 237
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++YGI + +M PL + S+ L + I I ++ + +++
Sbjct: 238 LSYAFWNYGIAIVGNAKGAVMTNFTPLFAAIFSICFLDESIQPFHIISAILICLGVLI 295
>gi|218895874|ref|YP_002444285.1| transporter, EamA family [Bacillus cereus G9842]
gi|218544407|gb|ACK96801.1| transporter, EamA family [Bacillus cereus G9842]
Length = 303
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 285
Score = 36.4 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|12052846|emb|CAB66596.1| hypothetical protein [Homo sapiens]
gi|117644702|emb|CAL37816.1| hypothetical protein [synthetic construct]
gi|117645572|emb|CAL38252.1| hypothetical protein [synthetic construct]
gi|208967979|dbj|BAG73828.1| transmembrane protein 22 [synthetic construct]
Length = 412
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/304 (9%), Positives = 89/304 (29%), Gaps = 14/304 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + +F + + G L T+ + V LE+I R ++ + V Y
Sbjct: 100 QSRKMWIVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYY--QEA 157
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +I + F I + + + +++ L
Sbjct: 158 PFGPSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEK 217
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIP 189
+ + + L + L ++ + L ++ + +
Sbjct: 218 MAYVDMATVVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRS 277
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + F E + +LI + ++ F Y
Sbjct: 278 IKEKISMWTALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYY 337
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + V +++ ++ +V + +L I++I++ V +
Sbjct: 338 ALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRN 397
Query: 310 KNKT 313
+
Sbjct: 398 LRRQ 401
>gi|126443852|ref|YP_001064037.1| RarD protein [Burkholderia pseudomallei 668]
gi|126223343|gb|ABN86848.1| protein RarD [Burkholderia pseudomallei 668]
Length = 297
Score = 66.5 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTGAGDDPQAARGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIIWTAPGALAVVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLARAFASRRLALSLAASAGLLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSALQWLALACAAAGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L +GG + + L G G +++ +
Sbjct: 181 ADSLALFSVE---MLALLPIAAAMLAAGGMSVAGRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLGEALSWQQLATYAPIWAAVALTAWHGFLIARR 297
>gi|323495687|ref|ZP_08100757.1| hypothetical protein VISI1226_04804 [Vibrio sinaloensis DSM 21326]
gi|323319154|gb|EGA72095.1| hypothetical protein VISI1226_04804 [Vibrio sinaloensis DSM 21326]
Length = 301
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 80/282 (28%), Gaps = 8/282 (2%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG + T+ L SVL IS R + + ++ L K
Sbjct: 21 LLLLVAVFWGTSYGLTKSALVYTSVLLFISIRFSITFLCMLPVVI--RDFRRGLNKDWKI 78
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
G ++ + V A + + + V +
Sbjct: 79 AIPTGFILSAIFFCEVFGVSQTSASNAAFLISLTVILTAFAELIINKKRVSNMLLGLTVC 138
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL---- 203
+ +L++ S + + A A E + L
Sbjct: 139 SVVGVLLLTSEQGIEFSLNTGDYFILTAALLRALMVTLTKRFTEGKEITTSTLTSLQSLV 198
Query: 204 -AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A A+ + + F F + +Y ++R + V ++
Sbjct: 199 VASCAIVGALVYLPASEFVLPTSTEFWITVAYLVLFCTLFAFYVQNYAVRRTSPTRVSLL 258
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ PL + ++ L++ + ++ +++ ++VV
Sbjct: 259 MGSEPLFGAIFAMVWLQESLSLIQLAGGALILFSVVVTSTRE 300
>gi|229089531|ref|ZP_04220800.1| Transporter, EamA [Bacillus cereus Rock3-42]
gi|228693838|gb|EEL47532.1| Transporter, EamA [Bacillus cereus Rock3-42]
Length = 316
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 98/297 (32%), Gaps = 21/297 (7%)
Query: 29 FVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGGLS 79
A LWG + + + EV +R S + F ++
Sbjct: 16 AAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKLLGKDMN 75
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K T K +G+ + + G + + + S+F + ++
Sbjct: 76 FKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----IILAHFLYK 131
Query: 140 KERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+ LN +II + +++ ++ H GI L L A +Y
Sbjct: 132 DDALNMRKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLSAAILYSYGNILAKEGSK 191
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + ++ + ++ + G F ++ L LI L++ FCI++ +
Sbjct: 192 TLDVGYMTAYQMIFGSIGLLCIGALQVGIMPFTFSVHAILMLIYLSFLSAAGFCIWNTIM 251
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 252 KYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQK 308
>gi|224825244|ref|ZP_03698350.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
gi|224602915|gb|EEG09092.1| protein of unknown function DUF6 transmembrane [Lutiella
nitroferrum 2002]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 89/284 (31%), Gaps = 12/284 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G+ ++ A + +G+ L+ + + S E++ R + + A +
Sbjct: 20 RLGSAWMVVAALFFGLMGLFVKLGAQHFSSTELVFWRTAFGTLTLGVAACWRRERFVTPH 79
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V I + + YA+ + +P+ L + L+ER
Sbjct: 80 LRY--------HVQRGLIGYISLLLYFYAIAHLPLSTAVTLNYTSPLFLALLSVLVLRER 131
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L+ + A L + +L++ + A + + A + G E
Sbjct: 132 LSARAVAALALGFVGVLLLLRPTLAGERWEAGLLGLGSGLLAGWSYLHVRELGRLGEPEW 191
Query: 203 LAIPALFYVVWNG---FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + G + + + L+G GL + + K +
Sbjct: 192 RVVFYFALISTVGGAVLMQFDRWHAVTATNVWLLLGLGLTATVAQLAMTRAYKVGRKLVA 251
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ Y + + V + + + + ++VI+ ++
Sbjct: 252 ANLSYLTVVFSTLLGVLVWQDSLTLASFVAMTLIVISGILASRR 295
>gi|49478661|ref|YP_038544.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49330217|gb|AAT60863.1| transporter, Drug/Metabolite Exporter family [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 299
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 93/294 (31%), Gaps = 12/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + GL + K+ +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKGLYIEKNEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KGVLLI-----GVIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTV 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNRDDMFLITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ ++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLAWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQKV 293
>gi|83638334|gb|ABC33868.1| integral membrane protein [Rhodococcus sp. T104]
Length = 322
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 88/276 (31%), Gaps = 14/276 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F Y++WG L + +E+V L + R L + + + G L
Sbjct: 13 FALFLVYVIWGSVYLAIRLVIEEVPPLGSMGVRFLLAGALMAAFLACRGGWGRLRLTW-- 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+A G +LA G L + + + L +R L
Sbjct: 71 -REAAGAAFLGVLLLACGNGLTSVGQLHGVPSGVTALLIAMVPLWICLYRTLGGDRPRVL 129
Query: 147 QIIAALLIILSLLIMTLHSGIPLL----------SLAIAVTWSAYCFARKTIPVGSSEGF 196
+++ + ++ L ++ L G + +++WS + + + +
Sbjct: 130 ELVGVGVGLIGLAVLVLPHGGGGQSGLPVIGVAVIVLSSLSWSFGSWIKPRVWLPRDVYV 189
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+LA + + +G F + F +++ + A L
Sbjct: 190 TAAYQLLAAGSAMSLASVATGERLDGAIGPRAWGAFGYLVVFGSIIGFTAYAWLLHHAPL 249
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
S V Y P++ + +L +P+ I I
Sbjct: 250 SLVATHTYVNPVVAVALGSVVLSEPVTPALVIGGAI 285
>gi|42779995|ref|NP_977242.1| EamA family protein [Bacillus cereus ATCC 10987]
gi|42735913|gb|AAS39850.1| transporter, EamA family [Bacillus cereus ATCC 10987]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 91/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSG---------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L IA ++ + + + I
Sbjct: 131 FGVILVLLKGNLALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNTGSFTVTNINTSFITSLLYTGLISTVLCMVFWNVGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIVGTMIVVTGCYLFS 285
Score = 36.0 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WMIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|255263865|ref|ZP_05343207.1| integral membrane protein [Thalassiobium sp. R2A62]
gi|255106200|gb|EET48874.1| integral membrane protein [Thalassiobium sp. R2A62]
Length = 310
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 102/301 (33%), Gaps = 25/301 (8%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+G +F A L+ + + + L L EV+ R L + V ++ +GG + +K
Sbjct: 1 MVGPVFALIAVTLFSLNDVAMKSLSGGYALHEVVLIRSLIGMGVVLLIMIPMAGGFATIK 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
M + A + F L +F++P + +VFL E
Sbjct: 61 TR-----RPVMHLIRAGFIVFANMSFFMGLAELDVATAVALFFISPALITISSTVFLGET 115
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A L+ +L +L++ A+ A +A + G + +
Sbjct: 116 VGPRRWTAVLIGLLGVLVILRPGTEAFTPAALYSIAGAAGYAGLHVMTRLMRGTESAVSM 175
Query: 203 LAIPALFYVVWNGFSGG-------------------EHFFLGNIPDTLFLIGYGLLNSFV 243
+ + +++ + D + +I GL S
Sbjct: 176 VFYIQIVFIIVGAAMWLLVGDGRFDTGANASMSFLLRAWVWPTGFDFIVMIILGLFASIG 235
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S + ++ + V EY A L IV + + + D V I +++ + + +
Sbjct: 236 GYCISQAYRLSEAALVAPFEYLALPLGIVLGIVVFGEWPDAVVWIGIVMIMGSGLYSVWR 295
Query: 304 T 304
Sbjct: 296 E 296
>gi|228951421|ref|ZP_04113529.1| hypothetical protein bthur0006_8420 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228808267|gb|EEM54778.1| hypothetical protein bthur0006_8420 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 87/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + + + ++++ + T+K
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFKTVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVIQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 185 GLFSLIFSFIIETPKLPSTTNSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ L
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILLSVLIAELD 281
>gi|218891445|ref|YP_002440312.1| putative permease [Pseudomonas aeruginosa LESB58]
gi|218771671|emb|CAW27445.1| putative permease [Pseudomonas aeruginosa LESB58]
Length = 299
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 93/283 (32%), Gaps = 11/283 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P GTL + A ++ G L VL+V+ R ++ + A L
Sbjct: 4 PIRRGTLEMTSAMLICGTIGWLV-LLSGQPVLDVVFWRCVFGFATLLVACAALG----FL 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ KA + + S + +W + + + Y V P + V LG+ FL E
Sbjct: 59 RRGSLGRKAFLLALLSGVFIVGNWVLLFASYSRASIAIGTAVYNVQPFMLVGLGAAFLGE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIP------LLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ ++ L +L + G L + +A +A + V +G
Sbjct: 119 KVTARKLGWLGLSFAGMLAIVSAHGDSDAPRGDYLFGILLALAAALLYAFAALIVKRLQG 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + P + ++ + I++
Sbjct: 179 TPPHLIALIQVGTGVLMLAPLANLAELPRDVAPWASLATLGIVHTGLMYVLLYGAIQKLP 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G + + P+ I+ + + + + + +++A
Sbjct: 239 TALTGALSFIYPVAAILVDWLVFEHRLSLAQWLGVAAILLAAA 281
>gi|254235562|ref|ZP_04928885.1| hypothetical protein PACG_01489 [Pseudomonas aeruginosa C3719]
gi|126167493|gb|EAZ53004.1| hypothetical protein PACG_01489 [Pseudomonas aeruginosa C3719]
Length = 299
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 94/283 (33%), Gaps = 11/283 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P GTL + A ++ G L VL+V+ R ++ + A L
Sbjct: 4 PIRRGTLEMTSAMLICGTIGWLV-LLSGQPVLDVVFWRCVFGFATLLVACAALG----FL 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +A + + S + +W + + + Y V P + V LG+VFL E
Sbjct: 59 RRGSLGREAFLLALLSGVFIVGNWVLLFASYSRASIAIGTAVYNVQPFMLVGLGAVFLGE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIP------LLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ ++ L +L + G L + +A +A + V +G
Sbjct: 119 KVTARKLGWLGLSFAGMLAIVSAHGDSDAPRGDYLFGILLALAAALLYAFAALIVKRLQG 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + P + ++ + I++
Sbjct: 179 TPPHLIALIQVGTGVLMLAPLANLAELPRHVAPWASLATLGIVHTGLMYVLLYGAIQKLP 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G + + P+ I+ + + + + + +++A
Sbjct: 239 TALTGALSFIYPVAAILVDWLVFEHRLSLAQWLGVAAILLAAA 281
>gi|322371282|ref|ZP_08045834.1| hypothetical protein ZOD2009_17348 [Haladaptatus paucihalophilus
DX253]
gi|320549272|gb|EFW90934.1| hypothetical protein ZOD2009_17348 [Haladaptatus paucihalophilus
DX253]
Length = 309
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/281 (8%), Positives = 77/281 (27%), Gaps = 7/281 (2%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + L + + + R+ + + ++V + L
Sbjct: 20 WGGSYVAISVGLHNLPPVFFAASRLDIAAVVLLPSVVAWFDDWRPTTAGDWLTVFAAGLF 79
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ A + + + + + + + L ++ L ++ +L +
Sbjct: 80 VAGGTNAFLFVGQQTTPSAVAAVIFALNPILATLFAWALLPSERLSVVSVLGVVLGILGV 139
Query: 156 LSL------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ ++++ P + L A + +L
Sbjct: 140 AIVADPTPEMLLSARGLGPWILLCGAACLGFGTVLTRRFETTLPTLVTTSWGLLFGGLFL 199
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ V G + + + + + I R ++ Y P++
Sbjct: 200 HAVSYGLGEHVSTAWSSTLLVSIAYLGVVATAGAYSAYFELIARIGAVRTALVSYVVPVV 259
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ ++ + I F ++ + T++ +
Sbjct: 260 TAIAGWLLVGETITLHTVAGFVVIATGFALTERRTLVAGLR 300
>gi|310777896|ref|YP_003966229.1| protein of unknown function DUF6 transmembrane [Ilyobacter
polytropus DSM 2926]
gi|309747219|gb|ADO81881.1| protein of unknown function DUF6 transmembrane [Ilyobacter
polytropus DSM 2926]
Length = 298
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 81/289 (28%), Gaps = 13/289 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G F A + WG + + +L V EV R+ ++ +F + +
Sbjct: 3 KKGYGLAFLAGVAWGTLGIISNYLGQTGVGSFEVAFLRLFFAFLSMFIFYLIADVNKIKI 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L+ + + + P+ + L +F E
Sbjct: 63 ----RREGVKHTLLIGIITQVTMSLAVFKCISMTSTTVAIMMVCLGPLFTAILSMIFFNE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------ 195
++ + +A L +M +L A + A
Sbjct: 119 KITLFKGLALFLAFYGAFLMITSGDFSVLKANGAGIFVGLISALAYGFFPILSKNIPKEC 178
Query: 196 -FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + L +I + F +S IK
Sbjct: 179 NLTGIIMYSFLVGSICIFPIIDTKMILQALSFNMICFSIILGIVPTILSFNFYSKAIKYT 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ GI+ + F L++ + T+ + I+++ +++ +
Sbjct: 239 TPTKAGIVTLVELPTAAIIGHFFLEEYLFTINVVGIIILLVGIMISKID 287
>gi|260433935|ref|ZP_05787906.1| integral membrane protein DUF6 [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417763|gb|EEX11022.1| integral membrane protein DUF6 [Silicibacter lacuscaerulensis
ITI-1157]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 96/289 (33%), Gaps = 9/289 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A + + + L + E++ +R + + V + + L
Sbjct: 13 LWMTGAIASFSSMAVAGRELSLIHDTFEIMMYRSIVGIFVVSTVLTATGKWRQVSTRHLG 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
L F+ L + YA+ F P+ V L + L ERL +
Sbjct: 73 LHAVRNSLHFAGQNL------WFYAVSVIPLAQVFALEFTQPIWVVLLSPLLLGERLTPM 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++AL+ +LI+T L +A SA FA TI GF C++
Sbjct: 127 RVLSALIGFAGILIVTRPGATDLTPGVLAAASSAIFFALTTISTKKLTGFASIGCIVFWL 186
Query: 207 ALF--YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ L FL+ GL + + A + V ++
Sbjct: 187 TTMQAVMGLVVAGMDGQIALPTAQSAPFLLLVGLAGLLAHFCITNALAIAPATVVIPFDF 246
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ V + + +P+D + ++ + + + ++ +
Sbjct: 247 ARLPTIAVVGMLLYHEPLDHWTLLGAAVIFAGIFLNVRAESRSNSATRA 295
>gi|229010256|ref|ZP_04167466.1| Transporter, EamA [Bacillus mycoides DSM 2048]
gi|228751106|gb|EEM00922.1| Transporter, EamA [Bacillus mycoides DSM 2048]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPLVWF-----KEKKIIPPRAAIIPLVI 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGITGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTVTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINSSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIFGTIIVVTGCYLFS 285
>gi|163792227|ref|ZP_02186204.1| hypothetical protein BAL199_15308 [alpha proteobacterium BAL199]
gi|159181932|gb|EDP66441.1| hypothetical protein BAL199_15308 [alpha proteobacterium BAL199]
Length = 307
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 82/267 (30%), Gaps = 13/267 (4%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
E + L++ + R ++L + +++F L A + V
Sbjct: 46 EALHPLQISAGRFAFALLTLTPILLWFRPSLK--------GAAWPVHVGRTICGWGAVTT 97
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
A + + F++P++++ L L E++ + AA + ++ L++
Sbjct: 98 MFAAAAAMRLADATAISFLSPMVAMVLAIPLLGEKVGPWRWGAAAIALVGALVLIRPGAE 157
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG-----GEHF 222
+A+ SA +TI V G + L G + +
Sbjct: 158 AFQPIALVALASACFMGVETILVKRLTGGENRTGEPMLRILAINNALGAAIAITAASFVW 217
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ L G + +F ++R S V + Y + + + +
Sbjct: 218 IWPSPAQWALLAAIGTVMVTAQSMFILALRRGDASFVVPLFYATLVFAALYDFAVFGEVP 277
Query: 283 DTVRTIVFGIVVIAMVVYLLPTVINSG 309
+++ VV +
Sbjct: 278 TVASASGAALIIAGAVVLAWRERVRGR 304
>gi|281357166|ref|ZP_06243655.1| protein of unknown function DUF6 transmembrane [Victivallis
vadensis ATCC BAA-548]
gi|281316197|gb|EFB00222.1| protein of unknown function DUF6 transmembrane [Victivallis
vadensis ATCC BAA-548]
Length = 313
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/287 (9%), Positives = 80/287 (27%), Gaps = 20/287 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L ++WG T + T+ L S +E++ R +
Sbjct: 9 GHLAALLTILIWGTTFISTKVLLRSFSPVEILFIRFTIGYLSLLAF-------FPKFLPF 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF-LKERL 143
+ + + + +++ AL P+ + L ++ ++R
Sbjct: 62 RELRHELYYAGAGLSGVTLYFLVENIALTHTLASNVGIMVSAAPLFTALLAWLWLKRKRP 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT-----------IPVGS 192
+ I + ++ + L + + +
Sbjct: 122 GGRFFLGFGAAIAGIALIVFNGNTVLKLNPLGDLLAILAALIWAVYSILTKLIAGFNLNM 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + GF + L + F ++++ +K
Sbjct: 182 VLCTRRIFFYGWLFMIPALFLFGFQPETARCFEWLNLFNLLFLGFGATALCFAVWNWTVK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P++ ++SS IL++ + + + +++
Sbjct: 242 VLGPVETSLYIYLVPVVTVLSSALILRERLTPAAIAGTILTLAGLLI 288
>gi|113953120|ref|YP_730819.1| integral membrane protein, DUF6 [Synechococcus sp. CC9311]
gi|113880471|gb|ABI45429.1| Integral membrane protein, DUF6 [Synechococcus sp. CC9311]
Length = 369
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 85/295 (28%), Gaps = 6/295 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S + + + + + + L + V EV+ R L S+ +
Sbjct: 76 SQSAKEWRACGALIACALAFSLMTVCVKHLGGRLPVAEVVLVRSLISIAITLAMLRRLKV 135
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
S + G L +A + + T + +
Sbjct: 136 --SPWGEQRGLLLIRGGLGTAALLCFFEALARLPLAAATLLQYTYPTLTALAAWLLLGEP 193
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ + + L + + +++ + G A+ A A + V
Sbjct: 194 IRRRIGIAVLLGLLGVTLVVQPEWVGGTMGSLPAMAALIGLGGALLTALAYVSVRQLSVQ 253
Query: 197 FIEMCVLAIPALFYVVWN-GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ ++ L V G+ N + ++LIG GL + G+
Sbjct: 254 EHPLVIVFYFPLVSVPATLPLLWGQATLWPNPTEWVWLIGVGLFTQIGQIWLTEGLSALP 313
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + Y + + V +PI + V+ A ++ L + + K
Sbjct: 314 AARATSINYVQVVFAALWGVLFFAEPITGAVVLGALCVLGATLISL--SARTARK 366
>gi|150005780|ref|YP_001300524.1| hypothetical protein BVU_3273 [Bacteroides vulgatus ATCC 8482]
gi|149934204|gb|ABR40902.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 302
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 87/285 (30%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG T + T+ L +S ++ +R + ++
Sbjct: 12 LMAIITVAIWGTTFVSTKILIQHGLSPSDIFFYRFTLAYLCMWCISY-------KKLFAN 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ +++ AL S +PV++ L +F ++
Sbjct: 65 RVKDELLLLLAGLCGGTIYFITENTALGITLASNVSLIVCTSPVLTTLLSYLFRRKEPFT 124
Query: 146 LQII-AALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
++ +++ ++ + ++ + L + + +
Sbjct: 125 RHLVYGSIMALIGVGLVVFNGSFILKINPLGDILSLTAALMWAFYCLILKQLDNHYSIVF 184
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L ++ + + I L + + F ++ +K
Sbjct: 185 ITRKVFFYGVLTILPMFLFRPLNWDNILMMQPIVFGNLLFLGFVASMLCFIAWNACVKEL 244
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S I+ + I + +++ + +
Sbjct: 245 GAVKSTNYIYIVPLVTLLTSAVIINEKITWIALTGCFLILCGVYL 289
>gi|18313907|ref|NP_560574.1| hypothetical protein PAE3209 [Pyrobaculum aerophilum str. IM2]
gi|18161475|gb|AAL64756.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 280
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 87/286 (30%), Gaps = 11/286 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G L + +WG + + + + RV + + + +
Sbjct: 2 RLLGVLEMVVVTAIWGSVSILAIW-SGLPSPVFVFFRVFIAFLILLAFL----------R 50
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + S LA++W YA+L Y+ P+++V + +
Sbjct: 51 EFDAKNFLRISVFLSGIFLALNWIALFYAVLLVPVAEAVMLYYTGPLLAVVIMHFLGERA 110
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+AA I ++ ++ + IA+ + V
Sbjct: 111 GLARLGLAAAAFIGAVAVIKPFNISGSAGALIALVSGVLYGLLIVTNKLAVRSLPPIRLV 170
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A+ +V F F L + L + ++ +K+ + ++
Sbjct: 171 FYQTAIAAIVTAPFLFTTEFRLTPSGLAVALTAALVNTLLALYLWYDALKKISVHLASVL 230
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P+ + F+L Q + +V+ + V+ L
Sbjct: 231 SYLDPVFATAFAYFLLGQAPSATALLGGTLVITSGVLSALLEARKK 276
>gi|53723179|ref|YP_112164.1| hypothetical protein BPSS2163 [Burkholderia pseudomallei K96243]
gi|76819450|ref|YP_336435.1| rarD protein [Burkholderia pseudomallei 1710b]
gi|126456488|ref|YP_001076950.1| RarD protein [Burkholderia pseudomallei 1106a]
gi|134281831|ref|ZP_01768538.1| RarD protein [Burkholderia pseudomallei 305]
gi|167908090|ref|ZP_02495295.1| RarD protein [Burkholderia pseudomallei NCTC 13177]
gi|167916438|ref|ZP_02503529.1| RarD protein [Burkholderia pseudomallei 112]
gi|226194009|ref|ZP_03789610.1| RarD protein [Burkholderia pseudomallei Pakistan 9]
gi|242310984|ref|ZP_04810001.1| protein RarD [Burkholderia pseudomallei 1106b]
gi|254182619|ref|ZP_04889213.1| RarD protein [Burkholderia pseudomallei 1655]
gi|254185661|ref|ZP_04892179.1| RarD protein [Burkholderia pseudomallei Pasteur 52237]
gi|254192389|ref|ZP_04898828.1| RarD protein [Burkholderia pseudomallei S13]
gi|254264209|ref|ZP_04955074.1| protein RarD [Burkholderia pseudomallei 1710a]
gi|254296451|ref|ZP_04963907.1| RarD protein [Burkholderia pseudomallei 406e]
gi|52213593|emb|CAH39647.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|76583923|gb|ABA53397.1| rarD protein [Burkholderia pseudomallei 1710b]
gi|126230256|gb|ABN93669.1| RarD protein [Burkholderia pseudomallei 1106a]
gi|134246893|gb|EBA46980.1| RarD protein [Burkholderia pseudomallei 305]
gi|157806425|gb|EDO83595.1| RarD protein [Burkholderia pseudomallei 406e]
gi|157933347|gb|EDO89017.1| RarD protein [Burkholderia pseudomallei Pasteur 52237]
gi|169649147|gb|EDS81840.1| RarD protein [Burkholderia pseudomallei S13]
gi|184213154|gb|EDU10197.1| RarD protein [Burkholderia pseudomallei 1655]
gi|225933954|gb|EEH29940.1| RarD protein [Burkholderia pseudomallei Pakistan 9]
gi|242134223|gb|EES20626.1| protein RarD [Burkholderia pseudomallei 1106b]
gi|254215211|gb|EET04596.1| protein RarD [Burkholderia pseudomallei 1710a]
Length = 297
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTGAGDDPQAARGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIIWTAPGALAVVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLARAFASRRLALSLAASAGLLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
V +G ERL+ LQ +A + + + F +
Sbjct: 121 MVLVGRFHYHERLSALQWLALACAAAGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L +GG + + L G G +++ +
Sbjct: 181 ADSLALFSVE---MLALLPIAAAMLAAGGTSVAGRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLGEALSWQQLATYAPIWAAVALTAWHGFLIARR 297
>gi|229165768|ref|ZP_04293536.1| Transporter, EamA [Bacillus cereus AH621]
gi|228617769|gb|EEK74826.1| Transporter, EamA [Bacillus cereus AH621]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPLVWF-----KEKKIIPPRAAIIPLVI 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
T +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGITGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNMLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL +A ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMMAAVCIWGIYSVSSKWATKTVTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + + T L + ++ G+++ +T G+
Sbjct: 191 GVILLLPFNIGNFTVSNINSSFITSLLYTGLVSTVLCMVFWNIGVQKLGATTSGVFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ IVV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQIFGTIIVVTGCYLFS 285
>gi|269797219|ref|YP_003311119.1| hypothetical protein Vpar_0151 [Veillonella parvula DSM 2008]
gi|269093848|gb|ACZ23839.1| protein of unknown function DUF6 transmembrane [Veillonella parvula
DSM 2008]
Length = 298
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/299 (11%), Positives = 94/299 (31%), Gaps = 12/299 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
++G + +LWG++ QFL +++ +++ R L + + +F
Sbjct: 1 MKQYEVIGVIITLLGAVLWGVSGASVQFLSNFRNMNLEWLVTMR-LITAGLLTVIYAWFR 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
S+ +G++VF +A+ + ++ + + ++ P + +
Sbjct: 60 FRNSIFNVFHSVKDTLGLIVFGVFGMALCQYTYFRSIALAGAGIATVLQYLAPSMIIIYL 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKT 187
V +R + + ++ +L ++ + + + + +L + ++
Sbjct: 120 LVRYGKRPSKGETVSVILALVGTICLMGNGDGLSIESFPMAVLVWGLLSAVGVAIYSISP 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + G + + + L F +
Sbjct: 180 VDLLYKYGTLPIVGFGMFISGIVAAILFHQPNSYAVWDAWTVIGCFNVIFLGTIVSFNAY 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
G+KR I+ P+ S L + I +++ +V+ L
Sbjct: 240 LEGVKRIGAVPGSILSSIEPISAAFFSWAFLGNEFSLLGLIGMAMIISTVVIIALEKRK 298
>gi|226362829|ref|YP_002780607.1| hypothetical protein ROP_34150 [Rhodococcus opacus B4]
gi|226241314|dbj|BAH51662.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/276 (10%), Positives = 84/276 (30%), Gaps = 11/276 (3%)
Query: 29 FVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ I +G+TP + + VS ++ R L +F +
Sbjct: 20 CGAASAIAYGLTPTFAAIGYAGGVSPAVLVCLRSLVGAALLFLLAWSTGRLKGVTW---- 75
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
AVG+ + + F A+ + + P+ + L V + R++
Sbjct: 76 -KSAVGLCCVCGPLFGIQLLCFFAAVRVTGAQIAVVIVHIYPLFVMALVWVVARNRIHRG 134
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
Q++ A+ + + ++ + + + +
Sbjct: 135 QLMLAVAMSGGIALVAGAGTSAVALNGAVLALLSAGGYALYLVVGERWIHQVSPVAAGAL 194
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
++ A G+ + L LL ++ ++V ++
Sbjct: 195 ASLGAGITTGTIALVDGQPWTFEPSGWGSILFQGLLLMPIGIGCSFIAVRALGSTSVALL 254
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
P++ ++++ +L + + + +V++A
Sbjct: 255 GLLEPVVGVLAAQVLLGEQLSPPQWAGMAVVLLASA 290
>gi|259907889|ref|YP_002648245.1| Putative DMT Superfamily drug/metabolite efflux protein [Erwinia
pyrifoliae Ep1/96]
gi|224963511|emb|CAX55000.1| Putative DMT Superfamily drug/metabolite efflux protein [Erwinia
pyrifoliae Ep1/96]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/278 (11%), Positives = 85/278 (30%), Gaps = 5/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFA----IVYFSGGLSLL 81
LF A ++W + + ++ + + +R L +L + + +
Sbjct: 3 FLFPLLAVLIWSVNAIVSKLSAAAIDPAAISFYRWLVALLVLAPFALPGVWRHRQQVKQS 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L +GM+++ + + + + ++ V+ ++ +
Sbjct: 63 WWKLLVLGLLGMVMYQSLAYYAAHSVSALFMGIIAALIPLLTVLLSVVVIRLAPTLGILL 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L+ L G+ L + V ++Y + +
Sbjct: 123 GSLLSFCGLVWLVSQGNPAQLLTHGLGKGELMMFVASTSYALYGVLTRRWAIPLPNWQSL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I ++ GF L L L + ++ G+ R S+ +
Sbjct: 183 WMQIFFGVMLLTPGFLLASDVSLNAHNLPLVLFAAIPASVIAPFLWIQGVMRLGASSSSM 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ V +V L + + + I GI + +++
Sbjct: 243 YMNLVPIFTAVIAVSFLHEALHSYHFIGGGIALAGVIL 280
>gi|224283854|ref|ZP_03647176.1| Putative permease of the drug/metabolite transporter
[Bifidobacterium bifidum NCIMB 41171]
gi|310287882|ref|YP_003939140.1| permease of the drug/metabolite transporter [Bifidobacterium
bifidum S17]
gi|311064762|ref|YP_003971487.1| drug/metabolite exporter family transporter [Bifidobacterium
bifidum PRL2010]
gi|309251818|gb|ADO53566.1| Putative permease of the drug/metabolite transporter
[Bifidobacterium bifidum S17]
gi|310867081|gb|ADP36450.1| Transporter, drug/metabolite exporter family [Bifidobacterium
bifidum PRL2010]
Length = 304
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 90/301 (29%), Gaps = 17/301 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + + C +LWG + + V + ++ R++ + +
Sbjct: 10 GRVMLLCCAMLWGGSYPIAKVAMGVVTPQWLMGLRLVGASTIMLIL-------FRKRIVP 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
N + + + L + ++F V+ F+ + +++R
Sbjct: 63 YLNKSIIIPGLVTGLTYWGTMISQTVGLTMIEPGRSAFLTSAYCVLVPFVSWLLMRQRPA 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCFARKTIPVGSSEG 195
I+AA L + + ++L SG+ L++ + K V
Sbjct: 123 ARNIVAAALCLTGVGFVSLGSGLGGLTIGTGDLLTLLCAVIFSFNLVCLGKWSRVIDPVA 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
V A +L + + + + G+K
Sbjct: 183 LTFAQFVTAGVCFIVGASFSEPAPNASWLAPGVLACLVYLFLGATMLAQIMQNVGLKVTP 242
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
S I+ + +V SV + + F ++ +A++V + + +K
Sbjct: 243 PSQASIIMCLETVFSMVFSVLFYGETVSGAAATGFALIFLAILVSQIRLNGRLLERVGRK 302
Query: 316 S 316
+
Sbjct: 303 A 303
>gi|254439337|ref|ZP_05052831.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
gi|198254783|gb|EDY79097.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 95/306 (31%), Gaps = 14/306 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPL-YTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
++ ++P+ +F +WG + LEQ V + R+ G+
Sbjct: 1 MTAATHNVPSHGNWALLFFLSFVWGGAFMSMAVALEQYGPFTVAAGRISIGALGLLVVTA 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G ++D +L+ A+ + +AL + +P+ +
Sbjct: 61 IARPGDLAIRDP---KTLGFILILGILNFALPFSLLAWALQQVPSAFAGVAMGSSPIFVL 117
Query: 133 FLGSVF-LKERLNHLQIIAALLIILSLLIMTLHS---------GIPLLSLAIAVTWSAYC 182
L +F E++ +II ++ + LL++ L I +A +
Sbjct: 118 VLAYIFVPDEQIGPRRIIGVIIGFVGLLVLILPGIAIGNGAEGTIAARVACVAASLCYSI 177
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
A +L +L G L +
Sbjct: 178 GAILIRQAPPIPPLVFTAGMLTAGSLALTPLALLLEGIPEITSARATWAMLYAGVIPTGL 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F + I+ A + ++ Y PL ++ V +L + + + I+++ + + L
Sbjct: 238 AFLLRVVLIRSAGPIFMSLVAYIVPLWAVLLGVVLLNETLTLSTYLGALIILLGVGMTQL 297
Query: 303 PTVINS 308
+
Sbjct: 298 RLLKKR 303
>gi|168234162|ref|ZP_02659220.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168821680|ref|ZP_02833680.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194470722|ref|ZP_03076706.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194457086|gb|EDX45925.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|205331845|gb|EDZ18609.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205341701|gb|EDZ28465.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|320085393|emb|CBY95174.1| Protein pagO [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 63 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 182 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + V G++V A+V+ L + +
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLLPAR 293
>gi|153840655|ref|ZP_01993322.1| RarD protein [Vibrio parahaemolyticus AQ3810]
gi|149745681|gb|EDM56812.1| RarD protein [Vibrio parahaemolyticus AQ3810]
Length = 182
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L+ Q+IA LL +L G P ++L + + ++ Y +K I S F
Sbjct: 1 MGDKLSKGQLIAILLATCGVLYQVFQYGQLPFVALTMGLFFALYGLYKKKINYDWSTTLF 60
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
IE VLA AL Y+++ ++ GE + L G + +S I+ LS
Sbjct: 61 IEALVLAPFALGYLLFKQWTTGELASSVDTTTLLLYFGSAPITILPLIFYSIAIRITNLS 120
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
TVG+M+Y P L + +V + D V+ + F + + +++ + V K K
Sbjct: 121 TVGLMQYIEPSLQFILAVVFFGELFDDVKAVTFAFIWVGLLLTIFEGVAKGIKRKK 176
>gi|84498067|ref|ZP_00996864.1| hypothetical protein JNB_18308 [Janibacter sp. HTCC2649]
gi|84381567|gb|EAP97450.1| hypothetical protein JNB_18308 [Janibacter sp. HTCC2649]
Length = 315
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 94/298 (31%), Gaps = 18/298 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVS-VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
A I+WG T T L + RVL V ++ + L
Sbjct: 12 VAVTAIAPIVWGSTYAVTHLFLPADRPLFAGAMRVL----PVGLLMLAWHRRLPRGSWWW 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + + +G A + L + ++P++++ L +FL+ER
Sbjct: 68 RSLVL------GSLTMGLFFGLLYVAAVRLPSGLGATLTALSPMVTMVLAWLFLRERAAR 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSSEGFFI 198
++A+++ +L++ L + I V S F +
Sbjct: 122 ATLLASVVGAAGVLLLVLQNRSQGSVDLIGVLASLGAVTSASAGFVLTKRWSADENVIVV 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L L G L + + + + G+
Sbjct: 182 TSWQLVAGGLLLTPVALLVEGRPPQLPLSGWLALAYLGLVGSGVAYVAWFRGLASMSAGA 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
V ++ P+ + V +L +P V + G+V+ ++++ K +++
Sbjct: 242 VAVIGLLNPVAGTLLGVVLLGEPFGPVHLLGMGLVLGSVLLAQPQLRSALRKGTRQRT 299
>gi|291516772|emb|CBK70388.1| EamA-like transporter family [Bifidobacterium longum subsp. longum
F8]
Length = 311
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 83/290 (28%), Gaps = 16/290 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + LWG + L +F +E + ++ R++ + +
Sbjct: 25 LMLLGCAALWGGSYLLAKFAMEAIPPQWLMGLRMIGACLCMLAL-------FHKHIVPYL 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
PK + + L T + ++F V++ F + K R +
Sbjct: 78 TPKIIVPALVVGLTYWGTMVTQTIGLQTIEPGRSAFLTAAYCVLTPFATWIISKTRPKAI 137
Query: 147 QIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++A ++ ++ + ++L +G L +
Sbjct: 138 NLVAGVICLIGVGFVSLEPGGSLSLSAGDWLTIATAVIFSFNLTCLGVYTKRFDPIAVTF 197
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+A +L L + + + G+ S
Sbjct: 198 VQFGVAGVLFIIGALFTEPMPNASWLAPSVVASVLYLFLGATMSAQIMQNIGLAHVPASQ 257
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I+ T L + S + I + F ++ +A+++ ++ S
Sbjct: 258 ASIIMCTESLFAVTFSALFWGETIMWSSLVGFALIFVAVLMSVIKPTKQS 307
>gi|291287056|ref|YP_003503872.1| hypothetical protein Dacet_1144 [Denitrovibrio acetiphilus DSM
12809]
gi|290884216|gb|ADD67916.1| protein of unknown function DUF6 transmembrane [Denitrovibrio
acetiphilus DSM 12809]
Length = 299
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 95/294 (32%), Gaps = 16/294 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S T+M + + ++WG +Y + + +S ++V+ +RV + VF
Sbjct: 7 KSNQTLMPFIAFWVLGVIWGSNFIYMKLAVELISPMQVLLYRVFFGFVPVFLYARAKGVL 66
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + +L + G + + F + VF+
Sbjct: 67 KLEHLKYSHHFIIMSLLATTVYYYGFVKGTSLLLSGVAGAVSGAIPLFTFILGIVFI--- 123
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARK 186
+E+ + ++ +L++ L SG ++S + + S
Sbjct: 124 -PEEKATLKKATGIVIGFAGVLMIALQSGHDIMSSNLIGVLYISAGALCLGASFVYAKNF 182
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+P+ + VV G F + L L L + I
Sbjct: 183 VMPLKLPAAALTTYQLGFGLIELLVVTKYQGLGNVFTDMHSAIGLILGLGLLGTGLAYII 242
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ Y ++R + + Y P++ ++ FI+ +PI ++ + +
Sbjct: 243 YYYLVERLGAVSASSVTYLPPVVALLIGAFIVGEPISLTSYAATAMIFAGVFLL 296
>gi|262037458|ref|ZP_06010918.1| transporter [Leptotrichia goodfellowii F0264]
gi|261748493|gb|EEY35872.1| transporter [Leptotrichia goodfellowii F0264]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 91/281 (32%), Gaps = 19/281 (6%)
Query: 30 VFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ ILWG+ ++ + E + ++S R L ++ K
Sbjct: 10 LLLVGILWGLGFVFVKIGLNEGIDPFYLLSIRFLGGFAILYAIF--------RKKMKKIT 61
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + + F Y +LT +F + VI + + +ER N
Sbjct: 62 LYDMKAGIIIGMFQFFGYTFQTYGMLTTTASNNAFFTAINVVIVPYFFWLIYRERPNKSA 121
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
IA++L + + I++ + L SL + C V S+ + + L +
Sbjct: 122 FIASILCVAGIGIISFDKDMHLTSLNKGDILTIICAVFFAAQVASTGYYSERVHTLNLVF 181
Query: 208 LFYVVWNGFSGGEHFFLGN---------IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ V G + L + F + +Y K +
Sbjct: 182 IQMVTGGVLFLGNLIIFSGVSAIKPLHGMALIAILYLTIFSTAIPFLLQTYFQKWTTSTR 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I+ T L + + F+L + + +++ ++VV
Sbjct: 242 ASIIMTTESLFAPLFAYFLLGEVLTLKVIFGAVLILSSVVV 282
>gi|238650542|ref|YP_002916394.1| hypothetical protein RPR_02630 [Rickettsia peacockii str. Rustic]
gi|238624640|gb|ACR47346.1| hypothetical protein RPR_02630 [Rickettsia peacockii str. Rustic]
Length = 294
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 89/297 (29%), Gaps = 8/297 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + + +++L + EV R +S + +VY+
Sbjct: 1 MNDALKTYLTGIGWFLLSLVSSSANDVISKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + +L + Y L + F P+ ++ L
Sbjct: 61 GKN-------TLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E + + + ++ + L+I + +A FA I
Sbjct: 114 AVFFLNENIIWPRWVVTVVGFIGLVITLKPHAEDFNPEILYFVLAAISFAMLDIINKKFV 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ + + +++ + + L G S +
Sbjct: 174 IKESMISMLFYSAIVTAIVSLPVASQYWLTPSSFELALLFVLGSSGSLILFFLLKAFSMV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ Y ++ ++++ FI + D I++ + + +
Sbjct: 234 DATATAPYRYLELVISVIAAYFIFNEFPDKSTLHGAVIIIPTTLFIIYSEKKAMNRK 290
>gi|229198640|ref|ZP_04325342.1| Transporter, EamA [Bacillus cereus m1293]
gi|228584922|gb|EEK43038.1| Transporter, EamA [Bacillus cereus m1293]
Length = 299
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 93/294 (31%), Gaps = 12/294 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F ++WG ++ L + + + R+L+ + GL + K+ +
Sbjct: 5 YILLFICVVVWGSNFIFGAILVNTFHPVLLTTLRLLFINLFFLAYAIMCKKGLYIEKNEM 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + +A++ F L T + +TPV++ L L E L
Sbjct: 65 KGVLLI-----GVIGVAINQWSFYEGLQTADPTTAALILALTPVMTSILAVFILNEPLTA 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIE 199
+I + + + + S + + +I + G
Sbjct: 120 KLVIGGGIATFGVFFVIGVGQRFVFSEGLIWIFITMLSFSLSIVLIRKLGNREDMFLITF 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +L ++ L++ ++ +++A+ ST
Sbjct: 180 FSSIFGFLIMLPFLAFTFSHITLKYSIESWSLLIVTAILMHGICTLAWNNQLRKAQASTA 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P + +V IL++ + ++ I +V + S K
Sbjct: 240 AMFLNLEPFVTMVVGYIILQKSVTAIQIIGAVFIVCGVYTATFGYGKKSKGQKV 293
>gi|190894769|ref|YP_001985062.1| hypothetical protein RHECIAT_PC0000434 [Rhizobium etli CIAT 652]
gi|190700430|gb|ACE94512.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
Length = 285
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 89/272 (32%), Gaps = 8/272 (2%)
Query: 30 VFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +L+ + ++L +V +V+ R L + + I G +L + K
Sbjct: 1 MLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMI-ARQGPRALFRVEQKGL 59
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + + + + A+ Y P+ L FL E++ +
Sbjct: 60 QFMRVAMATGDVALF-----YAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRW 114
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A L+ ++I S L ++ ++ FA + V
Sbjct: 115 LAVLVGFAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLRSTSDTTLVTWQTVA 174
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
G S G I + L+ ++ + + + +K A S + ++YT L
Sbjct: 175 ALATGIGLSIGHWQPATPIDWSGMLLLG-VVATCAHLLITRSLKLAPASLLAPLQYTLLL 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
IV D + I+V A +
Sbjct: 234 WAIVLGYIFFNDIPDMQIVVGAAIIVFAGLFI 265
>gi|166031496|ref|ZP_02234325.1| hypothetical protein DORFOR_01194 [Dorea formicigenerans ATCC
27755]
gi|166028901|gb|EDR47658.1| hypothetical protein DORFOR_01194 [Dorea formicigenerans ATCC
27755]
Length = 289
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 88/285 (30%), Gaps = 13/285 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEV--ISHRVLWSLPGVFFAIVYFSGGL 78
+ G +++ + + +G PL + + V + R ++ ++ + +
Sbjct: 2 NTRVKGFIYLLLSAVYFGFMPLLVKVICADGSAIVGALFLRFALAIIPLYIYLKVRKVPM 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + K V + + T L ++ + + + +F PV + +F
Sbjct: 62 ELSVEEGKKILCVTVFGYGITALLLYSAYD-----YMPSGMATVIHFGYPVFVLLGSLIF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L+ R+ L+I+ L ++ + + SG + + I G
Sbjct: 117 LRRRVPKLKIVCVGLCMIGIFLSYAGSGGEAKPMGFVFALISGMTYAFYILYLEVGGLQD 176
Query: 199 EMCVLAIPALFYVVWNGFSGG------EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I + V + + F YG++
Sbjct: 177 IPAMKMIFYMNIVGSIMVFLIGKVSGSFVLHMNVNAWIAAFVLSLGAAFIGVGFFQYGVQ 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
I+ P+ ++ + +L + +++I++
Sbjct: 237 YVGAQDAAILSTFEPVTSMIVGILVLHESASLSSMAGCILILISV 281
>gi|157375846|ref|YP_001474446.1| hypothetical protein Ssed_2711 [Shewanella sediminis HAW-EB3]
gi|157318220|gb|ABV37318.1| conserved hypothetical transmembrane protein DUF6 [Shewanella
sediminis HAW-EB3]
Length = 300
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 104/288 (36%), Gaps = 12/288 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ T+ G +++ A +L G+ + ++ + +V I+ R L + +
Sbjct: 1 MKIQTLRGEIYLLLATLLAGVGWIASKEIISEVPGEVFITARFLLASLILLPFCYRRILA 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+L + V + + A + ++ +F + +I+ + +
Sbjct: 61 LTL-------KQVVSVCAVGVILAASVQVWVHAISISSTLAEGAFIMSLAMIIAPLVSWL 113
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP----LLSLAIAVTWSAYCFARKTIPVGSS 193
+ N I+ + I + ++TL +G +A + F V +
Sbjct: 114 LFQIPPNRAFWISLPIAITGMTLLTLTNGWHVEPNQWYFLLASALLSLHFVFNKKVVSTI 173
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L + + V E F L F I + + + + + G
Sbjct: 174 TPLASICLQLFMVGIGGAVSLTSMSPEAFELNRHILFWFAISTVVATALRYLMQTVGQFS 233
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
K+ T ++ P+ +V S+ +L + ++ + + GI+ +++ VY+
Sbjct: 234 VKIETASLIMILEPIWTLVLSISLLGEQVEIQKLMGGGIIFLSLFVYI 281
>gi|298488859|ref|ZP_07006884.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298156612|gb|EFH97707.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 304
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 87/301 (28%), Gaps = 4/301 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E S L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWSPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + K +G L+ + V + T + +
Sbjct: 58 RYRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAALVLFAAASWAFGSVLSKHMPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + Y P + ++ V + I + +++ A+V+ LP S K
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGIEECLAMVVIISAVVLIGLPQWRRSAVRK 297
Query: 313 T 313
Sbjct: 298 V 298
>gi|221638107|ref|YP_002524369.1| RhaT family, DMT superfamily transporter [Rhodobacter sphaeroides
KD131]
gi|221158888|gb|ACL99867.1| transporter, RhaT family, DMT superfamily [Rhodobacter sphaeroides
KD131]
Length = 308
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 90/296 (30%), Gaps = 7/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L + A + + + + Q + + + I+ R L SLP +F G
Sbjct: 4 SDNLRGALAMTVAMAAFTVNDALMKAVTQTMPLFQAIALRGLVSLPLLFLYGWAVGGLRF 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + G+L A + ++ AL+ P+ ++ L
Sbjct: 64 RIP-----RRDGGLLALRAGADVLSTVAYLSALMVLPLANLVAILQSVPLAVTLAAALVL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-FFI 198
KE L + A L+ +L++ ++ + C + +
Sbjct: 119 KEPLGWRRFSAILIGFCGVLLIVRPGAEGFSLWSLVGLAAVGCVVARDLATRRIGSDLPA 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L ++ S F + L+L G + + ++ ++
Sbjct: 179 ATIALWTSGAVTLLGLAGSLPSGFEPVTGGEALYLGGAAVALMAGYVSIVLAMRGGDIAA 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V YTA L I + + D + + F ++ + + +
Sbjct: 239 VSPFRYTALLWAIALGWLLFRDLPDGLALLGFAVITATGLFTIWREARLRRLPREA 294
>gi|330952957|gb|EGH53217.1| putative DMT superfamily transporter inner membrane protein
[Pseudomonas syringae Cit 7]
Length = 304
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 84/296 (28%), Gaps = 4/296 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F G + K +G L+ + V + T + +
Sbjct: 58 RFRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFAAAAWAFGSVLSKHLPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGGTLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + Y P + ++ V + I + +++ A+V+ LP S
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRS 293
>gi|229825917|ref|ZP_04451986.1| hypothetical protein GCWU000182_01281 [Abiotrophia defectiva ATCC
49176]
gi|229789937|gb|EEP26051.1| hypothetical protein GCWU000182_01281 [Abiotrophia defectiva ATCC
49176]
Length = 287
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 82/286 (28%), Gaps = 8/286 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G LF+ A + + L+ V ++ R + + + + +
Sbjct: 8 KGILFILLAGAGFALMGLFVNLAGNVPTMQKAFFRNIVPVFIAGAGLKKLGEKIRI---- 63
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
N L+ A+ YAL + + + P + LKER++
Sbjct: 64 --NKGDFLFLILRASFGTAGLICNFYALDHLKLSDANMLNKLAPFFVIIFSFFILKERIS 121
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q IA + + +G + AI V + + ++
Sbjct: 122 IFQGIAVFGAFAGAMFIIKPTGNVAIFPAIIGALGGVGAGAAYTMVRALGKRGVNGKLIV 181
Query: 205 IPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ F ++ T LI G+ + + A + I +
Sbjct: 182 FFFSAFSSLVCLPFLIVRFTPMSLYQTCMLILSGVAAAVGQLSITKAYFYAPAKEISIYD 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINS 308
Y ++ V L Q D + + I+ + +Y +
Sbjct: 242 YNQIIISTVLGFVFLNQLPDMYSFLGYIIIFAMGIWMYFYNKNKKN 287
>gi|167918135|ref|ZP_02505226.1| hypothetical protein BpseBC_06250 [Burkholderia pseudomallei
BCC215]
Length = 293
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/233 (11%), Positives = 68/233 (29%), Gaps = 8/233 (3%)
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ A + AL Q L + ++ P L + +L
Sbjct: 1 RRVRWPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWL 60
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL + +A L + +M L +A+A+ + + ++ G
Sbjct: 61 GERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPL 120
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFSYGI 251
V I + + P + + F G+
Sbjct: 121 ATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFFAGL 180
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
R + ++ P++ + + + + + ++ ++ A++ +
Sbjct: 181 ARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAG 233
Score = 44.5 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 8/85 (9%), Positives = 27/85 (31%)
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ + L + ++ A+ S V ++ Y P + + + + L +
Sbjct: 3 VRWPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGE 62
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + + V + +
Sbjct: 63 RLTRAKAVALALCVAGSALMVGGGR 87
>gi|149928030|ref|ZP_01916278.1| hypothetical protein LMED105_14805 [Limnobacter sp. MED105]
gi|149823218|gb|EDM82454.1| hypothetical protein LMED105_14805 [Limnobacter sp. MED105]
Length = 296
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/279 (8%), Positives = 78/279 (27%), Gaps = 5/279 (1%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + ++ + ++ + + RV + + + K
Sbjct: 13 SMIWGSSFVFYKIAAADMAPAFMAALRVAFGALFLGGLFALTRKQTQVAKRWKLIAVIAV 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK---ERLNHLQII 149
L + F + A + T+ + + + L +
Sbjct: 73 FASALPFTLVAYASFTVTASVLVIINATAPIWAALVALVWTRAVPSPMALLGLVLGLLGV 132
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
A ++ + + T +G+ + + A + L + +
Sbjct: 133 AIIVGFDAATLNTEGTGLGVAAALAAAACYGIATNMAKYLGSDIDPLTNAFGCLLMGSFI 192
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + F+ E L L + + ++ + ++ + + P+
Sbjct: 193 LLPFVPFNLPEQM-PAMSSWLAILGVGVLCSGVAYLLYFRLVMDIGPTSALTVTFLTPVF 251
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ L + + I +V+ + + + +
Sbjct: 252 GVLWGNLFLGETVGWHTLIGGLVVLAGTALAAVYGLQKT 290
>gi|90409874|ref|ZP_01217891.1| putative permease [Photobacterium profundum 3TCK]
gi|90329227|gb|EAS45484.1| putative permease [Photobacterium profundum 3TCK]
Length = 292
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 92/279 (32%), Gaps = 13/279 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + CA +L ++++ ++ + I R + + + +SL
Sbjct: 9 LLIVCATLLASAGWIFSKQTIQGLPPFGFIGLRFVLASLLILPFCYRLFKQVSLKDIAQS 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + T + ++ +F ++ ++ + K++ +
Sbjct: 69 SLVGMLLGAALLTWI-------YAISVSDTLGEGAFIMSLSMLLVPLVAWPLFKQKPSRP 121
Query: 147 QIIAALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I+ I+ L++++L G +A A F + +
Sbjct: 122 FWISLPFAIIGLVLLSLSGGGWHQSVSQVWFLLAAALLALQFNFNSRYAQRIPTLLLTCV 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + L ++ + + F + S + + + G K ++ I
Sbjct: 182 QLFVTGLMGLIASLMFEQWPQTVDIAIWGWFASSVLIATSIRYVLQTAGQKHTSVANAAI 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P+ + S+ + + + I +++ A+++Y
Sbjct: 242 IMVLEPVWTVFLSIMWYGEKMPVEKVIGCSLILFALLLY 280
>gi|330814256|ref|YP_004358495.1| permease of the drug/metabolite transporter (DMT) superfamily
[Candidatus Pelagibacter sp. IMCC9063]
gi|327487351|gb|AEA81756.1| permease of the drug/metabolite transporter (DMT) superfamily
[Candidatus Pelagibacter sp. IMCC9063]
Length = 302
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/295 (10%), Positives = 94/295 (31%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +WG + ++ + R++ + + +
Sbjct: 2 SKKLFSFICAISCSFIWGSAFVAQDMGMDHIGPFTFTGARMVIAFLCLLPF-FFIYEFSD 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K + V +V +L+ +ALL T+ + V+ F+
Sbjct: 61 IKKTKTNSKIIVSYIVLLGFLLSAGMCLQQFALLRTDVANTAVFTILYVVLVPFVAYFLF 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ ++ + L+ +L ++T + + + +A+ +A + + F
Sbjct: 121 SKNIHWSIWPSVLMCLLGGFLLTELDDVTIRAGDTLSVINAFFWAFHIVFISKFLRIFNY 180
Query: 200 MCVLAIPALFY-----VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+A +V F + + + F + Y +
Sbjct: 181 PITIAAFQCLVGAVVALVPAYIFEEIVFSNILLEWKELFYVGVISSGIAFLLQIYAQQNL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ V I+ + + +L Q ++ ++ + +++IA++ + + N+
Sbjct: 241 NPAPVAIILSLEGAIAAIFGWILLDQFLNEIKILGIIVILIAVIFAQIVPLRNNK 295
>gi|237741029|ref|ZP_04571510.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|229431073|gb|EEO41285.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
Length = 301
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/302 (10%), Positives = 87/302 (28%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L F LWGI + FL + V+ +I +R++ + + + Y
Sbjct: 1 MKKDNNFGMLTTFIGGTLWGINGVMGSFLFLNKNVTTAWLIPYRLMLAGLLLLGYLYYKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + +++F + + A+ + + + P + +
Sbjct: 61 GS-KIFDILKNPKDLFQIILFGLIGMLGTQYTYFSAIQYSNAAIATVLTYFGPTLVLIFI 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ + + +I+A L + ++ H L + S + +
Sbjct: 120 CLKERRKPLKYEIVAIALSSFGVFLLATHGNITSLQISFKALIWGMLSALSVVFYTIQPE 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + I + + + ++ F ++
Sbjct: 180 KLLEKYGPPTVVAWGMIIGGIAITFMTKPWNIDIIFDFTTCFVLMLIILFGTITAFILYL 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + I+ P+ + ++ L + + F ++ + +
Sbjct: 240 TGVNIIGPTKASIIACIEPVAATICAILFLGVDFGFLDLLGFICIISTIFIVAYFDKKTK 299
Query: 309 GK 310
K
Sbjct: 300 KK 301
>gi|189423612|ref|YP_001950789.1| hypothetical protein Glov_0541 [Geobacter lovleyi SZ]
gi|189419871|gb|ACD94269.1| protein of unknown function DUF6 transmembrane [Geobacter lovleyi
SZ]
Length = 347
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 82/288 (28%), Gaps = 4/288 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + IL+GI+P+ + + + + L S G+ ++ +
Sbjct: 3 KQGIHTALLSAILFGISPVACKAMTGEMPPALLAGLLYLGSGLGLAGVVLRQRTPVFTAL 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+L + + + + + F Y + S V + L + E
Sbjct: 63 HSLSGRQWLHLGGAIVSGGVLAPLFLAYGIRFGSATEVSLLLNFEAVATTLLAWLVFHEY 122
Query: 143 LNHLQIIA--ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ ++ L++++ G L +AV + + E +
Sbjct: 123 VGMRVWAGKLLIVGASVLIVLSGSGGTTLSLPGLAVLAACCLWGIDNNLTRELESLPATL 182
Query: 201 C-VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L + + T L L +F + ++ +
Sbjct: 183 LACLKGLSAGLFNILLARLLSSESGSALQVTAALGIGALSYGVSLVLFIHALREIGAART 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
T P + + SV +L + + I++ ++ +
Sbjct: 243 STWFATGPFIGTLLSVLLLGERPPEAYWLAALIMLSGILFLYGERHRH 290
>gi|187478693|ref|YP_786717.1| membrane protein [Bordetella avium 197N]
gi|115423279|emb|CAJ49812.1| putative membrane protein [Bordetella avium 197N]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/301 (15%), Positives = 92/301 (30%), Gaps = 9/301 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+S + A+ P G L A + ++ L + R + +
Sbjct: 1 MSPDKAASPRAAGILCFLAALVALASFDAASKHMLAYYPAPFLNVMRY--GVVASIALYL 58
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G P + + T+ I+ + YF +P+I V
Sbjct: 59 LLRRGAPSWSRQPYKPLLLARGLALGTVGTCFMTALIWM----PLSEATAIYFTSPLIMV 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L L E + + +A +L++ + SA +A +
Sbjct: 115 ALSPWLLGEHVGRAKWLAVFAGFGGMLLIVRPGSDLPPLGTALMAVSAVAYAIFQVLTRK 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G A A + + D+LF++G GL N +
Sbjct: 175 LAGKVDSQVQYAYTAFVCLAMTALPAPFFLPDPWPGLSDSLFILGMGLSNGIAQILLIAA 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+R + ST+ + Y L+ + S F+ +P D + ++V A + + K
Sbjct: 235 FQRVEASTLAPLNYFHLLMAMAFSTFLFNRPPDGLAVAGMILIVGAGIFLVTRRAAPRKK 294
Query: 311 N 311
+
Sbjct: 295 S 295
>gi|49480267|ref|YP_035082.1| DMT family permease [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49331823|gb|AAT62469.1| permease, Drug/Metabolite Exporter family [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRVAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ I IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQIIGTMIVVTGCYLFS 285
>gi|313500722|gb|ADR62088.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 85/286 (29%), Gaps = 4/286 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G Y++WG T L+ + +E + + R L + G+ + + + G +
Sbjct: 11 LIGAFLAL--YLVWGSTYLFIRIGVESWPPMLMAGVRFLIAG-GLLYGFLRWRGVPAPTW 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ A+G L+ S V + T + + G K
Sbjct: 68 PQWRAAGAIGFLLLSCGNGGVTVAEHAGVASGVAALAVATVPLFTLLFGLLFGHRNSKLE 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +L+L S I + A A+ +
Sbjct: 128 WAGIALGLVGIGLLNLGSNLQASPIGAALIIFAAASWAFGSVWSKTLPLPQGPMASAAEM 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L A+ + + F + Y +K + +
Sbjct: 188 LVGGAVLLLGSVLSGERMTQLPTAAGWGALAYLVFFGSILAFSAYMYLLKHVRPAAATSY 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P + ++ + + I + +++ A+V+ LP +
Sbjct: 248 AYVNPAVAVLLGIVFAGEQIGAEECVAMAVIIGAVVLIGLPQWRKA 293
>gi|302184789|ref|ZP_07261462.1| hypothetical protein Psyrps6_00555 [Pseudomonas syringae pv.
syringae 642]
Length = 304
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 84/296 (28%), Gaps = 4/296 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G + K +G L+ + V + T + +
Sbjct: 58 RLRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFAAAAWAFGSVLSKHMPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + Y P + ++ V + I + +++ A+V+ LP S
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRS 293
>gi|254437648|ref|ZP_05051142.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
gi|198253094|gb|EDY77408.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
Length = 304
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 88/299 (29%), Gaps = 14/299 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL------EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + A + T L + L + L++ R +++ G A
Sbjct: 5 QAPLTAVALMITATLFIAGTMLAAKSLGTDTLGAPLHPLQISHGRFMFAFMGFIAASAVL 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + V A A+ + F+ PV + L
Sbjct: 65 RPKIRN--------PNITLHVSRTICGATGVTLMFAAVAFIPMSDATAISFLNPVFGMIL 116
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
FL E++ + +AA + LI+ A+ +A + + +
Sbjct: 117 AIPFLGEKVGRWRWLAAAMAFAGALILLRPGPDTFQVAALLALGAALAMGFELVFIKKLA 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L I V + + + L+ GL+ + F + RA
Sbjct: 177 DREPPLQILLINNAIGCVLMSVAVIAFWAAPTLAQWGVLLALGLMMAGAQTCFINAMARA 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S V Y + + I Q D + + I+V + +N + +
Sbjct: 237 DASYVTPFSYLTLIFAGLYDWAIFAQVPDWISVLGAAIIVSGAALLAWREAVNRARLRR 295
>gi|91217000|ref|ZP_01253963.1| hypothetical protein P700755_11085 [Psychroflexus torquis ATCC
700755]
gi|91184871|gb|EAS71251.1| hypothetical protein P700755_11085 [Psychroflexus torquis ATCC
700755]
Length = 300
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 102/304 (33%), Gaps = 20/304 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + A ++G+T + L + + L I RVL + + +
Sbjct: 2 SKRVQALIAALFATSVFGVTHTLAKGLMPDYIQPLGFILIRVLGAGILFWIVSFFIKNEK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+K +L+ + +A++ FF L +S +TP++ L ++
Sbjct: 62 ------IKKEHWPRLLLCALLGMALNMLFFFKGLSLTTPINSSVIVTITPILVFVLSALL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARK 186
++E++ L+ + A++ + L + + G ++ + A+
Sbjct: 116 IREKVTWLKCLGAIIGLFGGLALIIFGVQQQVDAPNIPLGNAMIFVNATSYGLFLIVAKP 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + +I + W F E L + +
Sbjct: 176 LTKIYHPVTLMRWLFLTSIIINLPIGWTEFVSVEWQTLPFAIIWRIGFVIIGTTFLTYLL 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ +K ST+G+ Y P++ I ++ ++ ++ I +V + + +
Sbjct: 236 NIFALKYLSASTIGVFVYLQPVIAIAFAIISGADELNGLKIISAILVFLGVFMVTKNPSR 295
Query: 307 NSGK 310
K
Sbjct: 296 KRAK 299
>gi|91793038|ref|YP_562689.1| hypothetical protein Sden_1682 [Shewanella denitrificans OS217]
gi|91715040|gb|ABE54966.1| protein of unknown function DUF6, transmembrane [Shewanella
denitrificans OS217]
Length = 299
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 77/290 (26%), Gaps = 2/290 (0%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG+ + +E ++ S R + I YF +L+
Sbjct: 5 LLLLLTACIWGMGFVAQALGMEHLAPFMFNSLRFFIGAISLLPLIWYFKRKRTLIVGEKN 64
Query: 87 NPKAVGMLVFSATILAV-HWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + +A + + Y V I L
Sbjct: 65 SLLLGSVALGIVLFIAASFQQVGLLYTSAANAGFITGLYIVIVPILGLLLKHSTGLNTWL 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
IA + + + G + + A + I
Sbjct: 125 GCAIAVWGMYFLSIKDDMSIGYGDALQLVGALFWAVHILLIDHLARKHSAILLSQIQFMI 184
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
AL + + + + + + K A + V I+
Sbjct: 185 CALISLGVSLAIETTVLGNIGLAWGALAYSGLISVGVGYTLQVVAQKNAHPAHVAIILSL 244
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ + + +L + +D + ++++ M+V LP + KK
Sbjct: 245 EAVFAAIGGILLLNESLDNRALLGCALMLLGMLVSQLPLRYLVMFCREKK 294
>gi|145225540|ref|YP_001136218.1| hypothetical protein Mflv_4964 [Mycobacterium gilvum PYR-GCK]
gi|145218026|gb|ABP47430.1| protein of unknown function DUF6, transmembrane [Mycobacterium
gilvum PYR-GCK]
Length = 365
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/317 (8%), Positives = 85/317 (26%), Gaps = 37/317 (11%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + G LF + +G + + + L S ++ R+ +
Sbjct: 12 TQARADHFRSGLLFALASAFAFGCSGPFAKALMTAGWSPTAAVTARLAGGALAMAVFATV 71
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G A ++++ +A F+ A+ + + P++ V
Sbjct: 72 VRPGW----VREARHHARTVVLYGIVPIAGAQLFYFNAVAHLSVGVALLLEYTAPLLVVG 127
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLI---MTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ R + + + +L + + + + G+ + +A A
Sbjct: 128 WLWATTRHRPSGMTLAGVVLAVGGITLVLGIIGPGGVAAAHINLAGVGWGLAAAVCAACY 187
Query: 191 GSSE----------------------------GFFIEMCVLAIPALFYVVWNGFSGGEHF 222
F + + +
Sbjct: 188 FLMSDKAGAMSDKEVADGRPSLHPITLAAAGLAFGAVTVAALGFSGLMPLAFTANDAVIA 247
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + + + + GI R + ++ + + ++++ +L + +
Sbjct: 248 GFTTPWIVPVIALALIPTAIAYTLGIVGIARLRPRFASMVGLSEVMFAVLAAWMLLGEGM 307
Query: 283 DTVRTIVFGIVVIAMVV 299
+ I IV+ + +
Sbjct: 308 AAAQVIGGAIVLAGLAL 324
>gi|332187749|ref|ZP_08389484.1| hypothetical protein SUS17_2875 [Sphingomonas sp. S17]
gi|332012315|gb|EGI54385.1| hypothetical protein SUS17_2875 [Sphingomonas sp. S17]
Length = 327
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/310 (8%), Positives = 76/310 (24%), Gaps = 7/310 (2%)
Query: 5 ATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL 64
+ + E + + + + V A + PL + + + R+ +
Sbjct: 10 SERVESDSLSDRAGPNTTPPLAFVAVIIANVALAFGPLLVR-MADTGPVASAFWRITLAA 68
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
P + + G +L+ A G + + +
Sbjct: 69 PMLALVALI--GPARPRAPGKGQAGLWALLLIGGVAFAGDLGTWHIGIRQTTMANATLFG 126
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA 184
I G + + + Q IA +L + ++ S +
Sbjct: 127 NSATFIFPLYGFLVARAWPSRSQGIALILAAVGAGLLMGRSYQVDPRHLVGDLMCVLAGL 186
Query: 185 RKTIPVGSSEGFFIEMCVL----AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ M + + F+ + + ++
Sbjct: 187 LYAVYFILMSRVRATMPPVPALAWSTVASILPLLVFAVALGERVWPDHWSALILLALGSQ 246
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ Y + +G+ P++ + + + + +V A+V+
Sbjct: 247 IIGQGLMIYALGLLSPLVIGLALLVQPMVATAIGWIVYGETLALPDLVGVAMVATALVLV 306
Query: 301 LLPTVINSGK 310
+ K
Sbjct: 307 RRGSPKTVAK 316
>gi|326796494|ref|YP_004314314.1| hypothetical protein Marme_3262 [Marinomonas mediterranea MMB-1]
gi|326547258|gb|ADZ92478.1| protein of unknown function DUF6 transmembrane [Marinomonas
mediterranea MMB-1]
Length = 301
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 95/302 (31%), Gaps = 17/302 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +F + + W + + + + + R L + + F+
Sbjct: 1 MKNTNAYIFPLLSIVFWSGNYVLGRITLNQGMDPYTMSFLRWLLACAFLLP----FTYKA 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + +++ + + F AL T + P++ + + +
Sbjct: 57 ILRERQIIKDCLPLLILMGGLGVCNYNLFLYIALTTTTVTNAVLLNSLMPILIMLVARIL 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIP-----------LLSLAIAVTWSAYCFARKT 187
L R + LQ + + + ++ I + +A +W+ Y
Sbjct: 117 LGSRTSPLQNLGIAISTIGAAVIVSRGSIDTLLHLTITHGDMWVVAAVSSWALYSVLLSK 176
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
P S F + + + ++ F L + L + F +
Sbjct: 177 RPKAMSLYAFFSVTAIIGTLIQAPIYLAFGTHSVAELTANNWLVLLYMASFASIAAFICW 236
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ GI++ ++ G + P+ + S+ +L + ++T + ++ ++ +
Sbjct: 237 NKGIEKIGPASAGHFIHLMPIFSVALSIPLLGETLETFHLLGVIFILSGILTATVLNNRI 296
Query: 308 SG 309
Sbjct: 297 QR 298
>gi|325955380|ref|YP_004239040.1| hypothetical protein Weevi_1771 [Weeksella virosa DSM 16922]
gi|323437998|gb|ADX68462.1| protein of unknown function DUF6 transmembrane [Weeksella virosa
DSM 16922]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/263 (12%), Positives = 83/263 (31%), Gaps = 2/263 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M G + + +G+ P++ ++Q S+ + +R S + + Y L +
Sbjct: 2 KMKGYALGIISAVSYGLIPIFILPIKQTNFSLDTTLFYRFFISALLLLPVLWYKKENLKI 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +G+ ++ + +T + + VF +
Sbjct: 62 TPKELYVVVLLGLSYALSSEFLFMGYDLLSPGITSTILFIYPVFVALIMFLVFKEKLNRL 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ + + +L + + L+ + ++ + A GF +
Sbjct: 122 TVLSLILAFSGVLTLSLKNNSFEINFPGLIVVLLSAFFYALYILIVNQTKIKLSGFKLTF 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L+++V F G F++ + + IK +
Sbjct: 182 FSFLFTSLYFLVKAKFLGDSLLLPNVNMLINFVVFAFVTTLISSLALVFAIKYIGSTPTA 241
Query: 261 IMEYTAPLLMIVSSVFILKQPID 283
I+ P++ + SV + + +
Sbjct: 242 ILGALEPVVAVAVSVLMFNEVLT 264
>gi|254882039|ref|ZP_05254749.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|319640953|ref|ZP_07995661.1| hypothetical protein HMPREF9011_01258 [Bacteroides sp. 3_1_40A]
gi|254834832|gb|EET15141.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|317387398|gb|EFV68269.1| hypothetical protein HMPREF9011_01258 [Bacteroides sp. 3_1_40A]
Length = 302
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 87/285 (30%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG T + T+ L +S ++ +R + ++
Sbjct: 12 LMAIITVAIWGTTFVSTKILIQHGLSPSDIFFYRFTMAYLCMWCISY-------KKLFAN 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ +++ AL S +PV++ L +F ++
Sbjct: 65 RVKDELLLLLAGLCGGTIYFITENTALGITLASNVSLIVCTSPVLTTLLSYLFRRKEPFT 124
Query: 146 LQII-AALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
++ +++ ++ + ++ + L + + +
Sbjct: 125 RHLVYGSIMALIGVGLVVFNGSFILKINPLGDILSLTAALMWAFYCLILKQLDNHYSIVF 184
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L ++ + + I L + + F ++ +K
Sbjct: 185 ITRKVFFYGVLTILPMFLFRPLNWDNVLMMQPIVFGNLLFLGFVASMLCFIAWNACVKEL 244
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S I+ + I + +++ + +
Sbjct: 245 GAVKSTNYIYIVPLVTLLTSAVIINEKITWIALTGCFLILCGVYL 289
>gi|228921715|ref|ZP_04085032.1| Transporter, EamA [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228837927|gb|EEM83251.1| Transporter, EamA [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 309
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 91/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + F I+
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIIFATIFGLAIW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + ++ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQVNMMQLVGGLIIFIGLYVVKKGGMKK 300
>gi|189501534|ref|YP_001957251.1| hypothetical protein Aasi_0073 [Candidatus Amoebophilus asiaticus
5a2]
gi|189496975|gb|ACE05522.1| protein of unknown function DUF6 transmembrane [Candidatus
Amoebophilus asiaticus 5a2]
Length = 282
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 94/277 (33%), Gaps = 4/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF+ A + WG + L+ + L+++S I R L + + + + S L+ + +K
Sbjct: 4 LFMIIATLFWGASFLFIKLALQEISTASFIFLRFLVATISMAPIMAFSSISLN--RKVVK 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+G+L L I A L+ + + + +
Sbjct: 62 QGIILGLLQLGIIFLQTLGLETISASLSGFLTGLYIVFILVIQFIRQ-RRIPSFTDIATS 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
L +L+ + L ++ A+ + Y +A ++ + + +I
Sbjct: 121 VACLGGLGLLTHNFEVTNGVGVLYTIGCALCMALYIYALDAYSANNNAVLSTFIQMASIT 180
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
A +++ I L +S F + + + V I+
Sbjct: 181 AFSSILFLLPGNNLQIPTQPITWIAILFCGICCSSISFWLQNKAQRHLGAFKVSIILMLE 240
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + FIL + + I +++ ++ V +
Sbjct: 241 PIFCTIFACFILGEKLYAEAYIGIIMILASIAVINVR 277
>gi|26991448|ref|NP_746873.1| hypothetical protein PP_4767 [Pseudomonas putida KT2440]
gi|24986523|gb|AAN70337.1|AE016675_7 transporter, putative [Pseudomonas putida KT2440]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 85/286 (29%), Gaps = 4/286 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G Y++WG T L+ + +E + + R L + G+ + + + G +
Sbjct: 11 LIGAFLAL--YLVWGSTYLFIRIGVESWPPMLMAGVRFLIAG-GLLYGFLRWRGVPAPTW 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ A+G L+ S V + T + + G K
Sbjct: 68 PQWRAAGAIGFLLLSCGNGGVTVAEHAGVASGVAALAVATVPLFTLLFGLLFGHRNSKLE 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +L+L S I + A A+ +
Sbjct: 128 WAGIALGLVGIGLLNLGSNLQASPIGAALIIFAAASWAFGSVWSKTLPLPQGPMASAAEM 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L A+ + + F + Y +K + +
Sbjct: 188 LVGGAVLLLGSVLSGERMTQLPTAAGWGALAYLVFFGSILAFSAYMYLLKHVRPAAATSY 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P + ++ + + I + +++ A+V+ LP +
Sbjct: 248 AYVNPAVAVLLGIVFAGEQIGAEECVAMAVIIGAVVLIGLPQWRKA 293
>gi|309812280|ref|ZP_07706035.1| putative membrane protein [Dermacoccus sp. Ellin185]
gi|308433585|gb|EFP57462.1| putative membrane protein [Dermacoccus sp. Ellin185]
Length = 314
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 86/302 (28%), Gaps = 15/302 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G V A +LWG T F V L + + + +
Sbjct: 8 GIFAVLAAALLWGTTGTAATFAPTVGPLAMGAAALGIGGILQAAIAAPSLRRERPALSSQ 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ VG LA + + + S P+ S L V + RL+
Sbjct: 68 RGTVLVGAAAVLIYPLAFYSSMHLAGVAVGTV----VSLGSAPIASGLLERVIERRRLSG 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARKTIPVGSSE 194
++A L I ++ S + A A +
Sbjct: 124 WWMLAVALGIAGSAVLCAAKMHDSPSETLPTVAGVILGLVAGATYAMYSWSAHRLMNRGV 183
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G M + ++ G P + L + + +F YG+ R
Sbjct: 184 GRAAAMGAVFGLGGIALMPVLMLTGAPLIASAQPMMVGLYMAMVPMFLGYLLFGYGLTRV 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
LS + P + + +V I+ + + + + + +++V L + +
Sbjct: 244 TLSAATTLTLAEPAIAALLAVVIVGERLPALGWVGLAGICASLLVLSLAPATQARAAEPS 303
Query: 315 KS 316
+S
Sbjct: 304 RS 305
>gi|255655426|ref|ZP_05400835.1| hypothetical protein CdifQCD-2_06937 [Clostridium difficile
QCD-23m63]
gi|296451418|ref|ZP_06893155.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296880233|ref|ZP_06904199.1| conserved hypothetical protein [Clostridium difficile NAP07]
gi|296259685|gb|EFH06543.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296428822|gb|EFH14703.1| conserved hypothetical protein [Clostridium difficile NAP07]
Length = 314
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 99/308 (32%), Gaps = 18/308 (5%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G +F+ A +LW L+ +FL ++ +V R+ + + + +
Sbjct: 3 EKSKGYVFIAIAGLLWATLGLFGKFLMGNGLASEQVAFTRLFFGFIVLGIYSSIRTPQIL 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ A+ + A+ + + + +P+ V
Sbjct: 63 KI----SKKGIIYSVIIGIICQAMFNLCYFKAIDIVGVSIAAVLLYTSPLFLAIFSKVCY 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVG 191
KE + ++ + +L + ++ LL ++ A +
Sbjct: 119 KENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGILSAIAYALMPTISKNALK 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
I + A+F + + ++ L+ + + + ++ GI
Sbjct: 179 EFSSSTILVYSFLFGAIFMIPSSKPWEILNYANNLDVLFCMLMLGIVPAALAYIFYATGI 238
Query: 252 KR-AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV---YLLPTVIN 307
+ +LS G++ + ++ IL + + +++I+ VV +
Sbjct: 239 SKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRI 298
Query: 308 SGKNKTKK 315
K+ K
Sbjct: 299 FYKSSKLK 306
>gi|218672600|ref|ZP_03522269.1| putative transporter, permease protein [Rhizobium etli GR56]
Length = 292
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 91/282 (32%), Gaps = 16/282 (5%)
Query: 39 ITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
+ ++ + + + E+ + R + +++ + +
Sbjct: 5 LIDIFAKLAVVTIPSAEITAGRFAVQALCMLPIVIWRRSF------ADFSWRQSQFHAIR 58
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
I+ + F+ L +FV P++ LG +FLKE + + A +
Sbjct: 59 GAIITISMISFVTTLKYMAVADAIAIFFVEPIMVTILGGIFLKETIGWRRYTACGVGFFG 118
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF- 216
+++ S + +A+ SA C A + + ++ +++
Sbjct: 119 AMLIIQPSFNEVGYIALLPILSALCIAIFVLMTRVLSHKEDPWAMQFQMGIWGLIFCTLL 178
Query: 217 --------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
S + ++ G G + + Y + A ST+ ++Y +
Sbjct: 179 LLAGDGSGSDIFDPVMPAGSAWFYVAGVGAMAAIAGIFGVYAYRAAPASTLAPLQYFEIV 238
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + + D ++ + I++ + + L + K
Sbjct: 239 SATIFAWLVFGDFPDAIKWLGIMIIIASGIYILWRERRFASK 280
>gi|170023765|ref|YP_001720270.1| hypothetical protein YPK_1524 [Yersinia pseudotuberculosis YPIII]
gi|169750299|gb|ACA67817.1| protein of unknown function DUF6 transmembrane [Yersinia
pseudotuberculosis YPIII]
Length = 305
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 84/278 (30%), Gaps = 5/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV--YFSGGLSLLKD 83
LF A I+W + + ++ + + +R L +L + ++ ++
Sbjct: 3 VLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIRVY 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV--FLGSVFLKE 141
K + + LA + + AL V I + +V +
Sbjct: 63 WWKLMLLGMLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIAL 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LI L GI L + ++Y + + +
Sbjct: 123 GSLLSLGGLVWLISAGNPAQLLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPNWQSL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I ++ GF L L L + ++ G+ R +T I
Sbjct: 183 YMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTASI 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + +V L + + + I GI + +V+
Sbjct: 243 FMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVL 280
>gi|110680328|ref|YP_683335.1| integral membrane protein, putative [Roseobacter denitrificans OCh
114]
gi|109456444|gb|ABG32649.1| integral membrane protein, putative [Roseobacter denitrificans OCh
114]
Length = 290
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 83/292 (28%), Gaps = 10/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + A +L+ + + + L + + +++ L S + + L
Sbjct: 1 MDNLRGAALMVLAMLLFALEDMLIKLLAVDLPIGQIVGMLGLGSALLLAIVLKTQRQALF 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
TI V + S TP+ ++FL
Sbjct: 61 TAALLTPAIMLRAFGELVGTIGFVTA------IALTPLSTASAILQATPLFVTLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY---CFARKTIPVGSSEGF 196
+E + + A ++ ++++ L++ T V
Sbjct: 115 QESVGWRRWTAIIVGFFGVMLIIRPGLEGFSWLSLFAVQGVIGLGIRDLATRRVPPETSS 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + L+ I L+ F + ++ ++
Sbjct: 175 LQLSFWAFLVLIPAAGLMMWFNQTSPITPPPSTLLYFIAALLIGIFAYYCIVAAMRVGEI 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S V Y+ L +V + I + D + + I+V + + L
Sbjct: 235 SFVTPFRYSRILFALVIGISIFGERPDALTLLGAAIIVASGLYTLWRERRVR 286
>gi|240950258|ref|ZP_04754537.1| hypothetical protein AM305_03358 [Actinobacillus minor NM305]
gi|240295235|gb|EER46036.1| hypothetical protein AM305_03358 [Actinobacillus minor NM305]
Length = 282
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/278 (10%), Positives = 79/278 (28%), Gaps = 3/278 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ L V +L+G + ++ ++ S ++ RV + + ++ L
Sbjct: 2 NKHTLALLKVHSTAVLFGASGIFGALIQS-SADTLVLGRVWIAFFMISLYFIWKKQPLVS 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L A+ + +A + + + SF FV +F
Sbjct: 61 LSKKELGQLALSGALLAAHWVTFFVAVKVGGVALATLGFASFPAFVALFEVIFFKEKLHL 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + ++A + ++ + L V + + S
Sbjct: 121 KEIIL--LVAITIGLILVTPEFTLGSEGTQGLLWGVFSALSYGILAIVNRKSMSKLSGTQ 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ FS + + + L + + +F + T
Sbjct: 179 ASWWQYLFAGLILLPFSAEKLLVVSAVDWFWIFCIGFLCTTVAYTLFVSSLDTINARTAS 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ P+ I + + I I+++++
Sbjct: 239 MIISLEPVYAIAIAWICFNEVPTLTMFIGGAIILLSVA 276
>gi|237744575|ref|ZP_04575056.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|229431804|gb|EEO42016.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
Length = 349
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 81/282 (28%), Gaps = 4/282 (1%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A ++ I ++ L + V + + G+ K
Sbjct: 4 LFALLAASIYSINIPLSKLLLKHVETTMMAGLLYFGAGIGLIILTNIMKFIGISKKQEPL 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K + + + + + + S V + + V KE ++
Sbjct: 64 TKKELPYTIAMVILDIIAPILLMLGISMTNSANVSLLNNFEIVTTSIIALVIFKEIISKK 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
IA L+ ++ +I++ + + + S S IE+ +
Sbjct: 124 LWIAIFLVTIASIILSFEGKGAFVFNKGSLLVLAASTCWGFENNCTKMLSNKDPIEIVTI 183
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
F ++ + C++ K +
Sbjct: 184 KGCFSGLGSIIIALIIGEKFPDLTWLFTVMLLGFIAYGLSICLYIIAQKHLGAAKTSAYY 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
AP L + S+ +L + I F I++IA ++ + T+
Sbjct: 244 SVAPFLGVAFSMLLLHERPTLQFYIAFLIMIIATIIMVKDTI 285
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 6/138 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G+L V A WG T+ L +E+++ + +S G + L
Sbjct: 150 KGSLLVLAASTCWGFENNCTKMLSNKDPIEIVTIKGCFSGLGSIIIALIIGEKFPDLT-- 207
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+++ + +I A TS Y V P + V + L ER
Sbjct: 208 ----WLFTVMLLGFIAYGLSICLYIIAQKHLGAAKTSAYYSVAPFLGVAFSMLLLHERPT 263
Query: 145 HLQIIAALLIILSLLIMT 162
IA L++I++ +IM
Sbjct: 264 LQFYIAFLIMIIATIIMV 281
>gi|229016158|ref|ZP_04173110.1| Transporter, EamA [Bacillus cereus AH1273]
gi|229022395|ref|ZP_04178933.1| Transporter, EamA [Bacillus cereus AH1272]
gi|228738876|gb|EEL89334.1| Transporter, EamA [Bacillus cereus AH1272]
gi|228745112|gb|EEL95162.1| Transporter, EamA [Bacillus cereus AH1273]
Length = 320
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 94/275 (34%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 33 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIAPPRAAILPLIL 87
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + S+FLKE++N LQI++ +L
Sbjct: 88 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSSLFLKEKVNTLQILSMILSF 147
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 148 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 207
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + + T L + ++ G+++ +T GI
Sbjct: 208 GVILLLPFNIGSFTVSNINSSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 267
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ IVV ++
Sbjct: 268 PIFTAILAFIFLGEELTWIQIFGTIIVVTGCYLFS 302
>gi|254419342|ref|ZP_05033066.1| Integral membrane protein DUF6 [Brevundimonas sp. BAL3]
gi|196185519|gb|EDX80495.1| Integral membrane protein DUF6 [Brevundimonas sp. BAL3]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 17/294 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
P + + A + G+ P+ + L + R +++LP + GG++
Sbjct: 9 SPRAFALIVLLIAACVLGLAPILVR-LTETGPAAAGFWRFVFALPLLTLLASREPGGIAA 67
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ A+ F+ Y ++ + +TPV+ G + LK
Sbjct: 68 PSKWAL---------LAGLFFALDLSFWHYGIVMTSVANATVLCNLTPVVVTLFGWIVLK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSS 193
E + L ++A L + M + + ++V + ++
Sbjct: 119 ETPHRLFLLALALAMGGAFAMAAGADGGQGTNPPLGDLFSLSVAVWYSGYFLAVKAARAT 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G + ++ GE ++ + G+++ F ++ + +
Sbjct: 179 AGAMRVTFWATLLGAPLLLIVALVLGEDIIPASLSGWAACLTMGVMHVFGQGGVAWALGK 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S + P++ + +I + + ++ + +V+ A+V+
Sbjct: 239 LPASITAVTILIQPVVAGLLGWWIFGETLTPIQALGGALVLGAIVMAQRSQRTK 292
>gi|206968748|ref|ZP_03229703.1| transporter, EamA family [Bacillus cereus AH1134]
gi|206735789|gb|EDZ52947.1| transporter, EamA family [Bacillus cereus AH1134]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 90/299 (30%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFMMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIP 189
+ER + I +++ + + L + A +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I + V++ F+ + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTPSWESLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINLMQLVGGLIIFIGLYVVKKGGMKK 294
>gi|312962302|ref|ZP_07776793.1| hypothetical protein PFWH6_4221 [Pseudomonas fluorescens WH6]
gi|311283229|gb|EFQ61819.1| hypothetical protein PFWH6_4221 [Pseudomonas fluorescens WH6]
Length = 294
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 99/293 (33%), Gaps = 8/293 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +++G+T ++ + L S ++ R ++++ + + S
Sbjct: 1 MTPRSALGALHIGALMFGLTGVFGK-LAAASPSIIVFGRAVFAVLALAVFARFA----SN 55
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
P+ L+ S +LA HW F A+ + + + P +V L + +
Sbjct: 56 TAWKTLEPRDWRRLLVSGVLLAAHWVTFFIAVKVAGVAVATLGFTAFPAFTVILEGLIFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---FF 197
ER+ +I+ +L+ + L+++T + + + A + + +
Sbjct: 116 ERIRTNEIVLVVLVSVGLVLVTPDFNLASEATGGLLWGIASGLLFSLLSLNNRASSGRIP 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + + + + + +F + K
Sbjct: 176 AVQAALCQNVVVALCLLPVAAPGLAHVRALDWLWIGLLGVFCTGLAHSLFVASLAVIKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T ++ P+ I + + + + ++++A+V+ L + K
Sbjct: 236 TASVVFAMEPVYGITVAWLLFAETPTLRMLLGGALIIVAIVLSGLMGSASQAK 288
>gi|257439980|ref|ZP_05615735.1| putative membrane protein [Faecalibacterium prausnitzii A2-165]
gi|257197587|gb|EEU95871.1| putative membrane protein [Faecalibacterium prausnitzii A2-165]
Length = 300
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/287 (8%), Positives = 74/287 (25%), Gaps = 12/287 (4%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF-------SGGLSLL 81
+ +WG + + ++ R ++ + + F
Sbjct: 1 MLMLCAFIWGTAFVAQSAGSGMGAYSFLAGRSWLAVLVLLPTVRAFDALHRRHGAAYGWP 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + T+L + + V+ V + +FL
Sbjct: 61 KAPADRRHLLAAGFCCGTLLFAASAAQQIGITLNPSTAKAGFLTAMYVVLVPVFGLFLGR 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPL-----LSLAIAVTWSAYCFARKTIPVGSSEGF 196
R + ++ ++ + L ++ + +G L ++ +G
Sbjct: 121 RGSARLWLSMVIAVGGLYLLCMKNGFGGIEASDWILLSCAVLFSFQIMTVDHFAPQVDGV 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + A+ + + + + G +
Sbjct: 181 RLSLLQFFVVAVESTAAALLFENPTLAEFGANWLPLAYCGVMSSGVAYTLQILGQRDVNP 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ ++ + + +L Q + ++ A+V+ LP
Sbjct: 241 AIASLIMCLESVFSALGGWLLLHQSLSMREVFGCTLIFAAVVLAQLP 287
>gi|239978289|ref|ZP_04700813.1| integral membrane protein [Streptomyces albus J1074]
gi|291450177|ref|ZP_06589567.1| integral membrane protein [Streptomyces albus J1074]
gi|291353126|gb|EFE80028.1| integral membrane protein [Streptomyces albus J1074]
Length = 335
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/289 (7%), Positives = 70/289 (24%), Gaps = 29/289 (10%)
Query: 32 CAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + +G + + + L + L V+ R + +
Sbjct: 19 VSALAFGGSGVAAKPLIEAGLDPLHVVWLRAAGAAVVMLPLAWIHRDLPRRRPAL----- 73
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+L F +A + A+ + ++ P + + + +
Sbjct: 74 ---LLGFGLLAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRPVTRAAAF 130
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-------------- 195
+L + L + + + + V S +G
Sbjct: 131 GVVLAVGGLACVVEVWAGLRFDVVGLLLALGAACCQVGYFVLSDQGGDAGDEAPHPLGVI 190
Query: 196 -----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + L L + +
Sbjct: 191 AYGLLVGTAVLTVIARPWSMEWSLLAGTARMDGTPVAAFLLLGWIVLLATALAYVTGVVS 250
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++R + G++ ++ V + +L + + + +V++ +
Sbjct: 251 VRRLSPAVAGVVACLEAVVATVLAWVLLGEHLSLPQIAGGVVVLLGAFI 299
>gi|228995315|ref|ZP_04155010.1| Permease, drug/metabolite transporter superfamily [Bacillus
pseudomycoides DSM 12442]
gi|228764432|gb|EEM13285.1| Permease, drug/metabolite transporter superfamily [Bacillus
pseudomycoides DSM 12442]
Length = 299
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 100/299 (33%), Gaps = 31/299 (10%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ILWGI T++ LE + ++ S
Sbjct: 4 ISMLLVAVILWGIAIAPTKWALESIQPFTLLF-----------------SFQQLRKSIVN 46
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + V S +A ++ F Y + G S P++++ ++FLKE++
Sbjct: 47 RDVPWKRISVLSFIGVAGYFMFTSYGISLTSGLHVSIIDAALPLVTIIFSALFLKEKIQL 106
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------------AVTWSAYCFARKTIPVGS 192
I +L + ++ +T+ SG S ++ A ++ + +
Sbjct: 107 NYWIGIILGFIGVVCITIPSGNNDQSASLIGDILILLSTFLFAFYTILLKRPKQEKNLSN 166
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + A+ + V F F + ++ ++
Sbjct: 167 EVFTTLTLIIGAMILFPFAVIETFYYVLPQIDTWKTGLSFTYLVVCATILAYWFWNKALE 226
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
R S G+ P + I++SV +L + + I +V+ ++ + K+
Sbjct: 227 RVSASVSGLYLNALPPISIIASVILLNESLTWKILIGGCLVLFGVIWADQDKLRVLMKS 285
>gi|229088560|ref|ZP_04220220.1| Transporter, EamA [Bacillus cereus Rock3-44]
gi|228694766|gb|EEL48082.1| Transporter, EamA [Bacillus cereus Rock3-44]
Length = 301
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 93/282 (32%), Gaps = 14/282 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + I+WG+ ++ LE+ + +E + R++ + P + Y L ++
Sbjct: 8 LLLLSVVIIWGVNYTIGKYGLEEFTAIEFTALRMITAAPLLLLLTFYIEKSL-----HME 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ S + ++ F+ + S ++P+ + +ER +
Sbjct: 63 LRDIPRLIAVSVVGIVLYQTLFMETIKYTSATNASLLISISPIFTTMFAVFLKQERFSQR 122
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+++ +++ ++ L G + + A I S+
Sbjct: 123 KLVGSIVACTGAALVLLAGHSLAGSFYGNGIGLITSICWGLYPVLAGPLIKKYSALRVTA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V+ L + + L + F ++ G+++ S
Sbjct: 183 WSAVVGAIPLVILSGWHIFSLPFTIEQGMTWFALLYSIFFVTVFGLVMWYIGVQKIGASH 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ Y PL+ +V + K+ I + I I+ + +
Sbjct: 243 TMVYMYITPLVAVVFAAIWAKEYISLQQMIGGCIIFLGLWFV 284
>gi|299142599|ref|ZP_07035730.1| hypothetical protein HMPREF0665_02195 [Prevotella oris C735]
gi|298576034|gb|EFI47909.1| hypothetical protein HMPREF0665_02195 [Prevotella oris C735]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 92/291 (31%), Gaps = 18/291 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + + WG T + T++L + E+ R L + ++F
Sbjct: 4 KKMIWGHIVGIITVLCWGGTFINTKYLIMGSLKPHEIFFLRFLIAYICIWFI-----SPR 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + K+ + ++ + L AL + + V
Sbjct: 59 RLFCNHWKDEALMVLIGITGGSLFFQAENMAVALSYTTNVSFIGCTAPLITTCMAIAMVK 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTI 188
+ + ++ +L+ + + I+ + L + A + R +
Sbjct: 119 SVKA-DTRLVLGSLIALAGVGIVIFNGQFVLHLNPLGDLLALLSAMAWAVYSLLMKRASS 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G+ I L ++ H FL L + + F ++S
Sbjct: 178 RYGAVFITRKVFFYGLITILPMFAIEPWTFPFHDFLKPTIWLNLLFLGFVASFVCFALWS 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I++ Y P+ +++S L +P+ + + ++++ + V
Sbjct: 238 WVIRKIGAMKASNYIYLNPVTTVIASAIFLNEPMTIMAYVGSALILVGVYV 288
>gi|218260254|ref|ZP_03475626.1| hypothetical protein PRABACTJOHN_01288 [Parabacteroides johnsonii
DSM 18315]
gi|218224654|gb|EEC97304.1| hypothetical protein PRABACTJOHN_01288 [Parabacteroides johnsonii
DSM 18315]
Length = 341
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 103/319 (32%), Gaps = 24/319 (7%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
++ + G F +G+ PL+T L + + ++ +R L++ + +
Sbjct: 25 TRKNTMNNLKGFAFGILTSATFGLIPLFTLPLMAKGMQFDSILFYRFLFAALALTGIMAA 84
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + K + F + + + +F P+
Sbjct: 85 KNESFHVEKRDIPVLVL------LGFFYTASAMFLFWGYNFMSAGIATTLHFTYPIFVTL 138
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP----------------LLSLAIAVT 177
+ + +E+ + + ++A +L I + +++ G + L A+
Sbjct: 139 IMLLVFREKTSWITLMAIILAICGVARLSIGEGTDSSDLPSLTDHPSALGIFIVLLSAIG 198
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
++ Y V G + V + + + + G + G + ++
Sbjct: 199 YALYITTVNKSRVQKMTGRCLTFYVFIVSTILFAIKAGTNQGIQPIPDWMSFANLILLAI 258
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ ++ + ++ P+ + V + +P I +++IA+
Sbjct: 259 VPTVISNITLVLAVRGIGGTLTAVLGAVEPITAVCVGVLVFSEPFTPNLAIGILLIIIAV 318
Query: 298 VVYLLPTVINSGKNKTKKS 316
+ +L I S K ++
Sbjct: 319 TLIILSKSIQSTLRKIYRA 337
>gi|162452571|ref|YP_001614937.1| DMT family permease [Sorangium cellulosum 'So ce 56']
gi|161163153|emb|CAN94458.1| permease of the drug/metabolite transporter (DMT) superfamily
[Sorangium cellulosum 'So ce 56']
Length = 331
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 8/288 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L++ A L+ + + + + EV + R L + LS+ +
Sbjct: 40 GVLWMLLAQSLFAAMNVLARLSSEHAPWPEVAASRTLVGAATALGVALVRRAPLSVGRGD 99
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ A + A + + +P+ L L ER +
Sbjct: 100 RRLAWARSLCGTGAMLCGFYTLG----TPQIALGDAVTLGATSPIFVALLAPRLLGERTS 155
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF---FIEMC 201
+A LL + + ++ +A+ T A A I +
Sbjct: 156 PRLWLATLLAFVGVGLVAAPRLAIAGEIALIATLGAVFSAFAMIWLRRIGAGGEGASPEA 215
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ +L + + L LIG GL + + VG
Sbjct: 216 IALHFSLVASAAMVALSIPVWRTPDALGALLLIGTGLAGGLAQLAMTRAYALDSAARVGA 275
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ Y +L V + L + + + +V A + + ++
Sbjct: 276 IGYVGVVLSHVLAAAWLGESPSADQLLGAALVTAAGLWLASQALRDAR 323
>gi|30021153|ref|NP_832784.1| drug/metabolite exporter family protein [Bacillus cereus ATCC
14579]
gi|29896706|gb|AAP09985.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 89/292 (30%), Gaps = 17/292 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IDRKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIP 189
+ER + I +++ + + L + A +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGTTYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I + VV+ F+ + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V
Sbjct: 236 VGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVV 287
>gi|330960287|gb|EGH60547.1| RarD protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 294
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/296 (16%), Positives = 120/296 (40%), Gaps = 9/296 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A +L+G+ YT + + E+ R+L ++P ++ + L
Sbjct: 3 KGVVLSVLASVLFGVMYFYTSLMAPLDGEEIFGWRMLLTVPCATLFMLVSGDWRRVRELA 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + L+ S+ +L F++A L + S YF+ P+ +F G + E
Sbjct: 63 ARLRQQPLLIFGLLLSSLLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMIFTGRLVYGE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L++LQ +AA +L + + +L +A + Y R+ + G + +M
Sbjct: 123 HLSYLQKVAAGFAMLGVGHEIVRLGSFSWETLLVAGGYPLYFLLRRKLKTDHLGGLWFDM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ L+++ + L + G++++ + + S G
Sbjct: 183 LLMLPIGLWFISNGHPQAIQQ----TPLLYLLIPLLGVISASALVSYIIASRLLPFSLFG 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++ Y P+L++ ++ + + I + + + +A+VV ++ + + + +
Sbjct: 239 LLSYVEPILLVGVALLLG-ESISRDEWLTYLPIWLAVVVLMIEGAKHMLAQRRRDA 293
>gi|320106136|ref|YP_004181726.1| hypothetical protein AciPR4_0899 [Terriglobus saanensis SP1PR4]
gi|319924657|gb|ADV81732.1| protein of unknown function DUF6 transmembrane [Terriglobus
saanensis SP1PR4]
Length = 301
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+S++ SLP + W + L +E+ S R + +
Sbjct: 1 MSQKQTSLP--IAITAAAVTIFSWASAYPAIRVGLRGFKPVELASLRFFTASLVFLVILA 58
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L + + + A + ++ LT SF PV +
Sbjct: 59 IKRPPLP------RGSHLFRIGLAGALGIVIYNLALNAGELTVSPVTASFLINCMPVFAA 112
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARK 186
LG FL ERL+ + A +L I+ H G+ + + +A ++ +
Sbjct: 113 LLGVTFLAERLSPIGWFAIVLSFTGATIIAFATPNGFHFGVGAVLILLAALCASVMGTLQ 172
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + I C++ A+ + + P L + +
Sbjct: 173 KTLLRTYPSISITACLMFTGAIILSPYLPEALKVAAHGPREPLFAALFLGIFPAAIGYLA 232
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ + R L+ + P++ I S L + + + +++
Sbjct: 233 WTIALSRFTLNQTASLLNLVPIVTIAISYLWLHEIPALSSFYGGLLAIAGVILLSRYGR 291
>gi|296328980|ref|ZP_06871487.1| integral membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296153873|gb|EFG94684.1| integral membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 287
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/293 (8%), Positives = 83/293 (28%), Gaps = 11/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ A ++W ++ L + + L + R L + I
Sbjct: 2 KNNSKAYFLIIAAVVIWSLSGLLVKAV-DADPLWISLIRSLGGGIFLLPYIF-------- 52
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
P + + + + + ++ VI
Sbjct: 53 --KEKIYPMKNILFGGIFMAIFLLAITITTRISSSAMAISMQYTAPMYVIGYGFYKSKEI 110
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + + I+ I +++ G ++ A+ F + +
Sbjct: 111 KFNKFIVFLLIFAGIIFNSITSMNGGNWWAIVSGITIGVAFVFYSYNLQKVKKGNLLGIV 170
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I + + + I +++ + ++ G++ +
Sbjct: 171 ALINIISAVFYGVLLIFRYSSPPSSFNEIIILSISGIVISGISYALYGEGLREVSMEKAM 230
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I+ P+L + + I +++++ +V + ++ N+ K+K
Sbjct: 231 IICLAEPVLNPIWVYLGKGEIPSMTTVIGSTLILLSAIVDITFSIKNNKKDKK 283
>gi|294678606|ref|YP_003579221.1| hypothetical protein RCAP_rcc03090 [Rhodobacter capsulatus SB 1003]
gi|294477426|gb|ADE86814.1| protein of unknown function DUF6, transmembrane [Rhodobacter
capsulatus SB 1003]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 90/291 (30%), Gaps = 9/291 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A L+ + ++ + + V EV+ L + + GL
Sbjct: 10 ENIRGAGLMTLAMALFALEDMFVKQAAKALPVGEVLMLFGLGGMICFAALALASGQGLWH 69
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + S TP++ V ++ +
Sbjct: 70 PAVASRLMGVKAGFEITG------RLGYTLGIALTPLSNASAILQATPLVVVAGAALIFR 123
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ + +A + L +L++ + A+ FA + + ++
Sbjct: 124 ERVGAARWVAVGIGFLGVLVILRPGLDGFVPAALWTVLGLLGFAGRDLATRAAPKVLTNF 183
Query: 201 CVLAIPALFYVVWNGF--SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + G + + L ++G L + + ++ +++
Sbjct: 184 QLGFYGFAALIPAGGLILAVTGGAGVPAPATLLPVLGAVLFGVTAYWALTKAMRTGEVAV 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
V YT L +V + + ++ +D +VV + V LL
Sbjct: 244 VTPFRYTRLLFALVLGILVFRESLDGATLAGAALVVASGVYTLLAGARRLK 294
>gi|57234167|ref|YP_181771.1| hypothetical protein DET1056 [Dehalococcoides ethenogenes 195]
gi|57224615|gb|AAW39672.1| membrane protein, putative [Dehalococcoides ethenogenes 195]
Length = 287
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 85/288 (29%), Gaps = 13/288 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + W + L S + R L + + + L
Sbjct: 6 LIALIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPD----- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + ++++ Y T S P+ SV L F K++L
Sbjct: 61 -KRDLPAIFLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTP 119
Query: 146 LQIIAALLIILSLLIMTLHSGI------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ LL + ++TL G + +A +++ + + GF
Sbjct: 120 AGWLGILLSFGGIAVITLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFS 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L +V E + + + ++SY + +A++S V
Sbjct: 180 TYAIWAGTLLLMVGAPGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKARISQV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P+ I + L + + + + + +++
Sbjct: 240 ISFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYGHYR 287
>gi|317402248|gb|EFV82834.1| membrane protein [Achromobacter xylosoxidans C54]
Length = 294
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 91/298 (30%), Gaps = 13/298 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F A ++W + + T+ ++ + +R W+L G+ +
Sbjct: 1 MFPLLAALIWSVNMIVTKMAAGVIAPAAIGFYR--WALAGLLLTPFALPAAWRQRRALW- 57
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P V +A++ G A + + P++++ +G+V L+ER + +
Sbjct: 58 -PYLPKFAVLGGLGMALYQGLAYVAASSTTATNMGIITAMIPLLTIAVGAVVLRERPSLM 116
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ LL + L ++ G + + V AY +
Sbjct: 117 ALLGGLLSLAGLALLIGEGDPARLLSVGANHGDVLMGVAALAYALYGVLLRRWGLPAGPW 176
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + F L L L + F ++ G++ +
Sbjct: 177 VSLYVQVAFGVLFQLPTFLMAPASPLNAENLPLVLYAGLFPSLFAPFLWMQGVRHLGPAR 236
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ P+ + + L + + + + +++ + + S
Sbjct: 237 ASVFLNLMPVATVAIAALFLDEKPHLFHIVGGAMALAGVMLAQMRAPFAGARRARVAS 294
>gi|170289733|ref|YP_001736549.1| hypothetical protein Kcr_0106 [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173813|gb|ACB06866.1| protein of unknown function DUF6 transmembrane [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 275
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 89/289 (30%), Gaps = 19/289 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + + A LW L T+ + R S +
Sbjct: 1 MSSKSGVIPLLLAAFLWSTIGLATKRALNAGSDAFWIGGMRAGVSAVLSLIFL------- 53
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + ++++++ + + + PVI + L
Sbjct: 54 ------RRRVLDFKLALIGIFFTGPLYLIYVFSVMHSGMGIAAVLLYTAPVIVIILAKFL 107
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---VTWSAYCFARKTIPVGSSEG 195
L E LN ++IA +L ++ + L G L +AIA + +Y + + G
Sbjct: 108 LNESLNTRKLIALILSFSGIVAVGLRGGGNLDLVAIALGLGSSLSYSGIILGVRKLAVSG 167
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L + L + + + + + G+KR +
Sbjct: 168 YDEIELGLGPQVWAALELLPLLSLSRGSLNLDSMISIVYLGIFPSFLAYYLHAMGLKRIE 227
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I+ P+ ++ L + + + +++ + ++
Sbjct: 228 AGPASIISNLEPISALILG-IFLGEQPGLLGFLGSALIISSAIIVSWRR 275
>gi|18490935|gb|AAH22557.1| TMEM22 protein [Homo sapiens]
Length = 412
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/304 (9%), Positives = 89/304 (29%), Gaps = 14/304 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + +F + + G L T+ + V LE+I R ++ + V Y
Sbjct: 100 QSRKMWIVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYY--EEA 157
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +I + F I + + + +++ L
Sbjct: 158 PFGPSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEK 217
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIP 189
+ + + L + L ++ + L ++ + +
Sbjct: 218 MAYVDMATVVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRS 277
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + F E + +LI + ++ F Y
Sbjct: 278 IKEKISMWTALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYY 337
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + V +++ ++ +V + +L I++I++ V +
Sbjct: 338 ALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRN 397
Query: 310 KNKT 313
+
Sbjct: 398 LRRQ 401
>gi|56698406|ref|YP_168779.1| drug/metabolite transporter family membrane protein [Ruegeria
pomeroyi DSS-3]
gi|56680143|gb|AAV96809.1| membrane protein, drug/metabolite transporter (DMT) family
[Ruegeria pomeroyi DSS-3]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 93/279 (33%), Gaps = 16/279 (5%)
Query: 27 TLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
A +WG + + TQFL S V R L + + + +
Sbjct: 11 IALTAIAPAIWGSSYFVTTQFLPAHSPFVVALLRALPAGLLLMLLV----------RKLP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ A AV W A G + + V P++ VFL +V L ++
Sbjct: 61 PRGWIGRLLILGALNFAVFWSLLFVAAYRLPGGVAATVGAVQPLLVVFLSAVALGTQIRL 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKTIPVGSSEGFFIEM 200
+++AL I+ + ++ L L ++ + A
Sbjct: 121 GAVLSALAGIVGVALLLLGPEARLDTVGVLAGLGGALSMAVGVVLTRKWRPDVPLVTFTA 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L L + + + L + + + ++ G+ R + + V
Sbjct: 181 WQLTAGGLLLIPVAWLAAPDWPGLSLTNLAALAWLGLIGGALTYILWFRGLARIEPAAVS 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ +PL ++ L + + V+ + IV+ A+ +
Sbjct: 241 LLGILSPLTAVILGWLALGEALSPVQGLGAVIVLGAVWI 279
>gi|33594838|ref|NP_882481.1| hypothetical protein BPP0118 [Bordetella parapertussis 12822]
gi|33599110|ref|NP_886670.1| hypothetical protein BB0118 [Bordetella bronchiseptica RB50]
gi|33564914|emb|CAE39859.1| putative membrane protein [Bordetella parapertussis]
gi|33575156|emb|CAE30619.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 294
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 91/279 (32%), Gaps = 16/279 (5%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + L+ + + + ++ RV + + +++ + +
Sbjct: 9 LLALAAVWGGSFLFMRVAVPEFGPAALMELRVGLAALFLLPLVLWRGKPALIARHWKAIL 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ +L YA + S + VTPV +G ++L +RL ++
Sbjct: 69 VVGTLNSALPFLLYA------YAAQSLGAGFLSVANAVTPVWGAVIGWLWLGDRLPRMRA 122
Query: 149 IAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L+ + ++++ +G +L+ A + +G +
Sbjct: 123 LGLLISMSGIVVLVWDKLDFHDGGTGPAVLAAISAPVFYGMAANWTKRYLGHVDALTNAT 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ +L E + ++ + + +F I R +
Sbjct: 183 GSMVAASLVLAPLAIIHWPE-QAVSFEAWRATVLLAIVCTGAAYIVFFRLIARVGPTAAV 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ V+ L + + G+++ +
Sbjct: 242 SVTFLVPVFGVLWGVWFLDEAVTPRILAGAGVILAGTAL 280
>gi|86146968|ref|ZP_01065286.1| transporter, drug/metabolite exporter family protein [Vibrio sp.
MED222]
gi|85835218|gb|EAQ53358.1| transporter, drug/metabolite exporter family protein [Vibrio sp.
MED222]
Length = 286
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 107/292 (36%), Gaps = 12/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M G L++ A +L GI + ++ + ++ I R + + ++ LS
Sbjct: 2 MKAMRGELYLLFATLLAGIGWIASKLVVLEMPGPVFIGVRFFVASLILLPFCIHHIRKLS 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + + A + +T +F + +I+ F+ V
Sbjct: 62 L-------KQIFSLCGVGLLLSASLQVWVFAVSMTESLSEGAFIMSLAMIIAPFVSWVIF 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPVGSSEG 195
+ + N ++ + I+ +L++TL +G + I ++ F + + +
Sbjct: 115 RVKPNRAFWMSFPIAIIGMLLLTLTNGWHVEQSQIYFLLASMLLSVHFVMNKRVITNIKP 174
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L + + + + + F + F++ + S + + + G
Sbjct: 175 IASICVQLFVVGVSGLAFASMTTQPEFEITQTLIFWFIVSAVVATSIRYLLQTVGQHSVN 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ ++ P+ ++ SV +L + ++ + + +++ ++ Y+ +
Sbjct: 235 MEVAALIMILEPVWTLLLSVSVLGETVEMQKLLGGAVIIGSLFCYIKWSRRK 286
>gi|222481408|ref|YP_002567644.1| protein of unknown function DUF6 transmembrane [Halorubrum
lacusprofundi ATCC 49239]
gi|222454784|gb|ACM59047.1| protein of unknown function DUF6 transmembrane [Halorubrum
lacusprofundi ATCC 49239]
Length = 313
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 85/289 (29%), Gaps = 10/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGV--FFAIVYFSGGL 78
G LF + +L+G T + + L L ++ R + F A L
Sbjct: 3 SQRTGALF-LVSAVLFGGTFIAAKAGLAYFPPLFFVAVRFDIGAVVLAAFAATSLSRSEL 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV------ 132
++ A+ + + S + +TPV +
Sbjct: 62 RPRTVGDIIGILATGVLVIGLTNALLFVGQQDVTSGVAAVVFSLNPILTPVFAAVLLSED 121
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L + L + + S ++ GIPLL A + R+ S
Sbjct: 122 RLSVRGSAGMVLGLLGVGLVANPDSTALLGGGIGIPLLFGAAVTSALGAVVIRRAESTMS 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
S + LA + + + + L + + + I
Sbjct: 182 STARTVWGVPLAAVLSHGLSLSAGESVTGLSVPPVALAALLYVGVFSGAIAYLAYFALID 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ Y P++ V +L + + V + FG++ + ++
Sbjct: 242 ETDATQANLLFYFVPIVSAVGGWVLLGETLSLVSLVGFGVIFVGFLLVS 290
>gi|152975211|ref|YP_001374728.1| hypothetical protein Bcer98_1412 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023963|gb|ABS21733.1| protein of unknown function DUF6 transmembrane [Bacillus
cytotoxicus NVH 391-98]
Length = 322
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/300 (14%), Positives = 98/300 (32%), Gaps = 17/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G + V LWG++ Q L Q VS +++ R+L S + + S
Sbjct: 1 MNSARLKGIIMVIIGASLWGLSGTAAQQLFQQERVSAEWLVTIRLLISGFLLLLFASFRS 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + A M++F + + ++ + + ++ P+
Sbjct: 61 KKHEIFGIWKQKSDANKMILFGLLGMLAVQYTYFASIREGNAAIATLLQYLAPIFITVYL 120
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIP--------LLSLAIAVTWSAYCFARKT 187
K R + I+ L ++ + + I ++ ++ A+
Sbjct: 121 IFKWKIRPKIIDFISITLSLIGTFFLLTNGSIHTLSVSAPAIIWGILSGLSLAFYSLYSK 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ I + I + + + FS E L ++ + +F
Sbjct: 181 ELLDRWSSAVIVGWGMIIGGIGVTMLHFFSTNEFILLSSMKYLHIQNLLLIAFVIIFGTL 240
Query: 248 SY------GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
I+ + T PL I+SSV IL P + + + V++ +++
Sbjct: 241 IAFYLYLDSIRYLTPKETTLFGCTEPLAAILSSVLILHVPFQSFQLLGAICVIVMVLLLS 300
>gi|320322649|gb|EFW78742.1| hypothetical protein PsgB076_22012 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330566|gb|EFW86545.1| hypothetical protein PsgRace4_08610 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 304
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 86/301 (28%), Gaps = 4/301 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + K +G L+ + V + T + +
Sbjct: 58 RYRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAMVLFAAASWAFGSVLSKHMPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + Y P + ++ V + I + +++ A+V+ LP S K
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGIEECMAMVVIISAVVLIGLPQWRRSAVRK 297
Query: 313 T 313
Sbjct: 298 V 298
>gi|319637715|ref|ZP_07992481.1| hypothetical protein HMPREF0604_00104 [Neisseria mucosa C102]
gi|317400870|gb|EFV81525.1| hypothetical protein HMPREF0604_00104 [Neisseria mucosa C102]
Length = 296
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 84/284 (29%), Gaps = 14/284 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G+ ++ A + + + L + S E++ R+L S +
Sbjct: 9 LGSAWMVIAALGFTVMNLSIKAASTQFGFSSGELVFWRMLVSTLFLGIMAKAQGNTF--- 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + I + Y+++ + + + LKE
Sbjct: 66 -----STPYWKTHLNRSVIGTLAMMCTFYSVMHLPLATGVTLNYTSSIWLAIFSFFILKE 120
Query: 142 RLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
R+ ++ + ++++ G +L + +A + S G
Sbjct: 121 RITLYTQAILVMGFIGVILLLNPSFQGGQEFAALVSLAGGAMSGWAYLQVRELSLLGEPG 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V + ++ +S + + +L G G+ + K K T
Sbjct: 181 WRVVFYLSLTGLIMGAVWSTITGWHPLTVSSLPYLAGIGISAMIAQLAMTRAYKVGKKFT 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
V + Y + +S V + I + I+V V
Sbjct: 241 VASLSYLTVVFSALSGVLLFGDKITWQEAVGMVIIVAGGVFSSF 284
>gi|261340126|ref|ZP_05967984.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316]
gi|288318057|gb|EFC56995.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316]
Length = 298
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 86/277 (31%), Gaps = 9/277 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A ++ G + L + V +V+ R +F I + S L
Sbjct: 6 KGVWQIGLAMLISGSIGAFV-LLSGLPVTDVVFWRCAIGAVTLFAFIRFSKKPFSAL--- 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV---FLKE 141
+ + V L V+W A L++ Y P + V +G +
Sbjct: 62 --TRATLALAVIGGVALVVNWLLLFAAYTRISIGLSTVVYNTQPFMLVMMGMFLGERVSL 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I+A +++ L I + A F T +
Sbjct: 120 VKWGWLILAFAGVVILLSSELAGGHSAEWLTGIGLALGAAFFYALTAMITRKLSSLTPQH 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I L VV G P T+ L + ++ + I++ +G
Sbjct: 180 IAFIQVLVGVVILLPMAQMPTLSGEFPWTILLTLGVVHTGIMYQLLYSAIQKLPTPIIGS 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + P++ I+ + ++ V+ +++ A
Sbjct: 240 LSFIYPVVAILVDTVVFGHALNAVQLAGGALILFAAA 276
>gi|198274181|ref|ZP_03206713.1| hypothetical protein BACPLE_00321 [Bacteroides plebeius DSM 17135]
gi|198272856|gb|EDY97125.1| hypothetical protein BACPLE_00321 [Bacteroides plebeius DSM 17135]
Length = 309
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 87/299 (29%), Gaps = 19/299 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ + + A +WG+ + ++ L + + R++ + + +
Sbjct: 4 SVKAHISLLLAASMWGLMSPVGKAAMEAGITGLTLANMRMIGAAVCFWTTSFFVKQEK-- 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + S + + G F + L S P++++ L ++FLK
Sbjct: 62 ----VNPHDLLMLFFASLLGIVCNQGCFTFGLSLTSPVDASIMTTTMPIVTMILAALFLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFARKTIP 189
E + ++I L + L + L G L A +K I
Sbjct: 118 EPVTPKKVIGIFLGSIGALTLILSNRGGDTEGGSVWGDALCMAAQISFACYLTIFKKLIA 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
M A ++ FS + + +
Sbjct: 178 RYHVITLMKWMFTYAAICFIPFSYHDFSVMDWAAFPVEVWLEVGYVILFGTYVAYILMLV 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G K + + V + Y P++ +V V+ + ++ + V
Sbjct: 238 GQKSLRPTVVSMYNYMQPVVGSCVAVLAGMATFGWVKIVAALLIFTGVYVVTQSKSRAQ 296
>gi|147907044|ref|NP_001091069.1| transmembrane protein 22 [Homo sapiens]
gi|148224156|ref|NP_079522.2| transmembrane protein 22 [Homo sapiens]
gi|148235965|ref|NP_001091068.1| transmembrane protein 22 [Homo sapiens]
gi|317373497|sp|Q8TBE7|TMM22_HUMAN RecName: Full=Transmembrane protein 22
gi|119599517|gb|EAW79111.1| transmembrane protein 22, isoform CRA_a [Homo sapiens]
gi|119599518|gb|EAW79112.1| transmembrane protein 22, isoform CRA_a [Homo sapiens]
gi|119599519|gb|EAW79113.1| transmembrane protein 22, isoform CRA_a [Homo sapiens]
gi|189054257|dbj|BAG36777.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/304 (10%), Positives = 89/304 (29%), Gaps = 14/304 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + +F + + G L T+ + V LE+I R ++ + V Y
Sbjct: 100 QSRKMWIVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYY--QEA 157
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +I + F I + + + +++ L
Sbjct: 158 PFGPSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEK 217
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIP 189
+ + + L + L ++ + L ++ + +
Sbjct: 218 MAYVDMATVVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRS 277
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + F E + +LI + ++ F Y
Sbjct: 278 IKEKISMWTALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYY 337
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + V +++ ++ +V + +L I++I++ V +
Sbjct: 338 ALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRN 397
Query: 310 KNKT 313
K
Sbjct: 398 LRKQ 401
>gi|307256110|ref|ZP_07537897.1| hypothetical protein appser10_1150 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306865291|gb|EFM97187.1| hypothetical protein appser10_1150 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 282
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 76/277 (27%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V I +G + ++ + S ++ RV+ +L + ++ L L
Sbjct: 3 KHTLALLKVHFTAIFFGASGIFGALITS-SADILVLGRVIIALACISLYFLWKKQPLVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + +A + + + SF FV + L
Sbjct: 62 TRRELFSQILSGALLAAHWVTFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++A + ++ + L L V + + +
Sbjct: 120 YREGFLLVAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGILAIVNRKNMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSTKGLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTIKMLIGGAIILLSVA 276
>gi|296503579|ref|YP_003665279.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
gi|296324631|gb|ADH07559.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 89/292 (30%), Gaps = 17/292 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIP 189
+ER + I +++ + + L + A +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGTTYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I + VV+ F+ + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V
Sbjct: 236 VGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVV 287
>gi|254504413|ref|ZP_05116564.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222440484|gb|EEE47163.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/275 (11%), Positives = 74/275 (26%), Gaps = 5/275 (1%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
L+ + L +I+ RV + +F + L K T + ++ + L + W
Sbjct: 28 ALDTIPPLTLITLRVGLASLVLFAILSIRGLHLPTDKKTWRALFIQSIVNSTGPWLLLAW 87
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL----IM 161
G ++ FV + L +A + I+ ++ +
Sbjct: 88 GQQSVESAVASVLNSTSPLFVFFFSLFLMSGSDRPAGQQLLGALAGIAGIVQIVGTGALE 147
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS-GGE 220
+L +A A + L + + +
Sbjct: 148 SLGGAFVPQVAVLAGAALYGIAAIRGRQFAHMPPLVTAAGTLICSTMTLLPLSLMIDHPW 207
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ I +F F I+ I Y + ++ + L +
Sbjct: 208 TLQISPQSLWAAGILSVFCTAFAFLIYFRLINTIGPMGTSSQAYLRSGIGVLLGIVFLNE 267
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+D + + +V+ +KT +
Sbjct: 268 TLDLETIAGICLAIFGVVLINWRRPKKQASSKTAQ 302
>gi|218961979|ref|YP_001741754.1| hypothetical protein CLOAM1712 [Candidatus Cloacamonas
acidaminovorans]
gi|167730636|emb|CAO81548.1| conserved hypothetical protein; putative membrane protein
[Candidatus Cloacamonas acidaminovorans]
Length = 316
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/305 (12%), Positives = 85/305 (27%), Gaps = 15/305 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L A + W T ++ + EV R+L + +F +
Sbjct: 1 MKLWITYLKAVLAMLFWSATFVWFKIAYKTYLPYEVTFLRLLLATILLFPFVWLTGKREK 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ K L + V + G I + S P+ S + L
Sbjct: 61 VPKKDLLHLMLVSFCEPFMYFIGEANGMRIVSSTLG-----SLIISTIPIFSAVGAWLIL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---------WSAYCFARKTIPV 190
+E+L L ++ +L + +M+L S + + + T+
Sbjct: 116 REKLPLLVVLGLILSTSGVAVMSLGSDDFSATFKGILLLLIAVFSGVFYGITVRNLTLRY 175
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + L + + F +++
Sbjct: 176 NPFTIVAWQNFFGMLYFLPLFLVVDGKHFFSVQHSLEGLATIAAMSIFASVIAFILYTGV 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ ++ I P+ + + IL + I + +I + + P K
Sbjct: 236 IRDLGVAKSNIFTNLIPVFTVALAYIILGDKLGLPGWIGLILAIIGLFLSQYPDWQKYRK 295
Query: 311 NKTKK 315
+ +
Sbjct: 296 QEKTE 300
>gi|154174279|ref|YP_001407422.1| permeases of the drug/metabolite transporter [Campylobacter curvus
525.92]
gi|112803254|gb|EAU00598.1| permeases of the drug/metabolite transporter [Campylobacter curvus
525.92]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 83/285 (29%), Gaps = 8/285 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++WG T L V ++ R L S + + F
Sbjct: 13 IALIFVALVWGATFLPMAGATATNGVFTILFWRFLISFLLMSAFTLKFRKFDPNSVKYGI 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
FSA A + S V +FL + +
Sbjct: 73 ILGLFLFCGFSAQTFA------FKFTYSGAVAFISGLNVVIVPFLMFLLFRQRIYVYSFV 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I L + L L + A +I V E F + A+
Sbjct: 127 GIFLGALGLYFLSNARFGLSFGELLSVVCAFAWALHIIFTSIFVKRCELFMLINTQFAVV 186
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS-FVFCIFSYGIKRAKLSTVGIMEYT 265
+ +++ G + ++ + + F F + ++ ++
Sbjct: 187 CVLSLIFAFIFEGGATPNLDYAFYKAMVISIVFATLFGFIMQHLMLRYTSPVKAALIFTL 246
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P+ V F+ + +++V+ + I++ +V+ L + S +
Sbjct: 247 EPVSAGVLGYFVGGEHLNSVQILGAAIILAGIVISELGSYYKSKR 291
>gi|145631105|ref|ZP_01786880.1| hypothetical protein CGSHi22421_05585 [Haemophilus influenzae
R3021]
gi|144983390|gb|EDJ90872.1| hypothetical protein CGSHi22421_05585 [Haemophilus influenzae
R3021]
Length = 296
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 56/290 (19%), Positives = 117/290 (40%), Gaps = 5/290 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL- 85
L + L+GI L++ +L+ +S +V + R+L + G+ + G SLL
Sbjct: 8 VLLCIFSQCLFGILYLFSIWLQPLSGTDVFAWRMLTMIFGLLLILFPTIGCRSLLSLITT 67
Query: 86 ---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
K+ + + + F++A L +G + YF+ P+I LG +LKER
Sbjct: 68 TLGKSWTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWLKER 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L+ +Q IA LL + H+ ++ V + + I + +
Sbjct: 128 LSFIQKIALLLAACGVAHELWHT-QSFSWTSLWVCTVYPFYYLSRKWMKIPALQGITLDI 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ I ++ S L L G++++ ++ +S ++
Sbjct: 187 ILISIPCFIYILSQSDMLSLVTQEYRYWLLLPALGIVSAISLSANLKSSQQIPVSIFAVL 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
Y P+L+ + +VF+L I T + + ++++V + ++N K +
Sbjct: 247 SYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLLNKNKVR 296
>gi|331004228|ref|ZP_08327707.1| hypothetical protein HMPREF0491_02569 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411501|gb|EGG90912.1| hypothetical protein HMPREF0491_02569 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 290
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/279 (11%), Positives = 92/279 (32%), Gaps = 3/279 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G +++ + +G+ P + + + ++ R L S + + L
Sbjct: 6 RIRGEIYLLLSGFFFGLQPFFAKIIYAHGGDAYSLLVLRFLISGAVFAAIYMMLGQSIWL 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
KD + + + + + + + + S+ V + + K
Sbjct: 66 TKDEFISI-LILSIPEAIMCILLFLSYSYISSGLASTLHFSYPAAVILLELLIFRKKISK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+L L A + + ++ +++LA V ++ Y G +
Sbjct: 125 IKLLCLLFCAIGIAVFYQPDGNINILGMVMALASGVGYAIYIIVLTHGKAGKIPVIKMSA 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + A+ + SG F + + + ++++ F G T
Sbjct: 185 WLSFLLAIEIAIVMLVSGKFRFQMDATAIGMSVFMAAVISTLALATFQIGAPMCGAQTAA 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P+ I+ V L + + + +++++V+
Sbjct: 245 LLSTIEPVSSILLGVIFLGEHMSLRIFVGICFILMSIVI 283
>gi|325915903|ref|ZP_08178199.1| Integral membrane protein DUF6 [Xanthomonas vesicatoria ATCC 35937]
gi|325537870|gb|EGD09570.1| Integral membrane protein DUF6 [Xanthomonas vesicatoria ATCC 35937]
Length = 285
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 96/284 (33%), Gaps = 9/284 (3%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + + L L+V R SLP V + +G +++ P
Sbjct: 1 MVAAVACFSLMDAAMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAGPRAIV------P 54
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
G+ + + G F+Y L YFV P++ L L E + +
Sbjct: 55 VRWGLHLLRGALGMAMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSVPLLGEHVGPRRW 114
Query: 149 IAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
A + ++ ++++ G + + V +A +A + V ++
Sbjct: 115 TAIAIGLVGVIVVLRPGVGGLVSLPGLMVLLAATAYAIAAVTVSLLTRTDTPQSMVVWFL 174
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
LF + G + L + G GL + + R + S + +EYT
Sbjct: 175 LFMAIGAGLLAIPGWVPLQASHGLLIAGMGLAGALGQVALTQAFMRGEASMIAPLEYTGL 234
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
+ +I + + D GI+V + + + S +
Sbjct: 235 VWVIGWDWLLWQTLPDGWTWTGAGIIVASGLYLLRRERIRKSDR 278
>gi|229070145|ref|ZP_04203409.1| Uncharacterized transporter [Bacillus cereus F65185]
gi|228712963|gb|EEL64874.1| Uncharacterized transporter [Bacillus cereus F65185]
Length = 304
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRLGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ SVFL E++ I
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAIFASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 FSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|196230647|ref|ZP_03129509.1| protein of unknown function DUF6 transmembrane [Chthoniobacter
flavus Ellin428]
gi|196225577|gb|EDY20085.1| protein of unknown function DUF6 transmembrane [Chthoniobacter
flavus Ellin428]
Length = 287
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 76/284 (26%), Gaps = 13/284 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+N+ L + ++W + + + +E + R +F +
Sbjct: 2 SQNSPSTHRSAVLLLLATAVMWSLGGVLVKSVE-WPSMAKAGARSAIGCVVLFLWL---- 56
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +A ++ A T F + P+ L
Sbjct: 57 -------RRQTRFTWRPTQLGAALAYCGTVSLYVIANDRTTAANTIFLQYTGPIYVALLS 109
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L ER + + + + + P + I + I + E
Sbjct: 110 PWVLGERARRSDWLCIAIALAGIALFFRDQFSPRGLMGIFAALGSGLCYGTMIVLLRKER 169
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L + L G L + ++ + + +FS I+R
Sbjct: 170 DSSPASALLLGNL-ITAVIGLPFAFGHSLPPAQAGMIVVLGVVQLGLPYVLFSIAIQRVT 228
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ P+L + + G+V+ A+++
Sbjct: 229 ALEAVLLPMLEPILNPLWVAIGRGEWPGPWSLAGGGLVLGAVIL 272
>gi|307154541|ref|YP_003889925.1| hypothetical protein Cyan7822_4747 [Cyanothece sp. PCC 7822]
gi|306984769|gb|ADN16650.1| protein of unknown function DUF6 transmembrane [Cyanothece sp. PCC
7822]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/306 (12%), Positives = 93/306 (30%), Gaps = 12/306 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ N + +G + + ++ + +++ ++ + + + + A
Sbjct: 1 MRIINKIQESKVGMILAL-GVLAISTAAIFIRLCFEIAGVQGVGFSLFLAASRLIIAATI 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
LK T +N A + LA+H+ +I +L ++ TPV
Sbjct: 60 LLPRWPNLKYTQENRSATYYACGAGCCLALHFATWITSLSFTSIATSTTLVTTTPVWISL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYC 182
L + E+L I + ++ +++TL G A S Y
Sbjct: 120 LSWWWFGEKLTKPMIRGITIALVGGILITLGDGSIGGENNNPLLGDFLALIGAWMASLYL 179
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + + AL + + G + L+
Sbjct: 180 LLGREAQRFGFSVGNYILIAYSSAALLLLPFPLLMGTSYLGYPKEVYLYVLLMAIFSQLI 239
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
++ ++ + V + P+ V I + + + +V+I + + ++
Sbjct: 240 GHTTLNWAVRSISPTLVALAILFEPVGSSVFGWIIFGELPPQLVILGGVVVLIGVAIAII 299
Query: 303 PTVINS 308
N
Sbjct: 300 AKTENR 305
>gi|86159271|ref|YP_466056.1| hypothetical protein Adeh_2849 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775782|gb|ABC82619.1| protein of unknown function DUF6, transmembrane [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 286
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 84/286 (29%), Gaps = 21/286 (7%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L +F + T L + L ++S EV R S + +
Sbjct: 4 LVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLW-------RRPVRVA 56
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + V+ GFF+ + + Y +TPV V L ER
Sbjct: 57 RRDLLALAGLGIVAIPVNQGFFLAGMAWTTPGHAALLYALTPVFVFLFARVRLGERAGPA 116
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGSS 193
++ L ++++ L G L + + + +
Sbjct: 117 KVAGIALAFAGVVVVLLGRGAVGLHGSSRQLAGDLLILLAVVAWSVFAVAGKPYAQRYGA 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G VL A V L L + + ++ + + R
Sbjct: 177 VGSTGVALVLGTLAYLPVGLVATDWSRLAALSPTGWAALGYLVLLTSVVAYILYYWALSR 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
A+ S V I P+L + + I + + +V+ +++
Sbjct: 237 AEASRVAIWSNLQPVLTALLAWAIAGERLTAPFVAGGAMVIAGVIL 282
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 12/135 (8%), Positives = 30/135 (22%)
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ + SA + L L + + +
Sbjct: 1 MVHLVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLWRRPVRVARRDL 60
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ F G+ ++ P+ + + + L + +
Sbjct: 61 LALAGLGIVAIPVNQGFFLAGMAWTTPGHAALLYALTPVFVFLFARVRLGERAGPAKVAG 120
Query: 290 FGIVVIAMVVYLLPT 304
+ +VV LL
Sbjct: 121 IALAFAGVVVVLLGR 135
>gi|163940778|ref|YP_001645662.1| hypothetical protein BcerKBAB4_2840 [Bacillus weihenstephanensis
KBAB4]
gi|163862975|gb|ABY44034.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 93/308 (30%), Gaps = 17/308 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ A++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V + +
Sbjct: 236 VGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKKT 295
Query: 309 GKNKTKKS 316
N K S
Sbjct: 296 ALNLKKVS 303
>gi|323499313|ref|ZP_08104290.1| DMT family permease [Vibrio sinaloensis DSM 21326]
gi|323315701|gb|EGA68735.1| DMT family permease [Vibrio sinaloensis DSM 21326]
Length = 300
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/292 (9%), Positives = 83/292 (28%), Gaps = 13/292 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG + + + + + +R ++ + + + + +
Sbjct: 3 YLLPLLTVFIWGGNAIVNKMASEAIEPSAMSFYRWFLAILVLTPFCL----NTVIKEWQV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT + + P++SVF+ L +R++
Sbjct: 59 IRPYLAKIAFLALLGMVLNQSLGYYAGLTTSASNMALITSLVPLLSVFMSVPLLGKRISP 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP--------VGSSEGFF 197
L I+ ++ + L M + T
Sbjct: 119 LSIVGGVIALAGLAFMLGQGDMAFFVHNSIAFGDGMMVIAATCYAAYCVLLKRWKMPLSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + + N L + ++ I
Sbjct: 179 WTLVYMQGVLALIMLTPLWLSSDQLLPSNEALPLIGYAGLAASVLAPWMWVKAIDLIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + P++ I + +L + I + +V+ +++ L
Sbjct: 239 SSAMFMNLMPVVAITLAATMLGETIHGYHLMGGLLVISGVILSQLKVSRFKR 290
>gi|294650929|ref|ZP_06728273.1| DMT family permease [Acinetobacter haemolyticus ATCC 19194]
gi|292823178|gb|EFF82037.1| DMT family permease [Acinetobacter haemolyticus ATCC 19194]
Length = 307
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 95/303 (31%), Gaps = 19/303 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ +L + G + V A ILWG T + +S L + + +
Sbjct: 1 MKSSAFNLSSHYGFIAVLVASILWGTTGTAASYAPNLSPLAIGAIAMGGGGLLQALLAHR 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G + VG++ + LA + + + S P+ +
Sbjct: 61 NILGHLPQIRSYLPILLVGVISVAIYPLAFYSSMRMAGITIGTV----ISIGSAPLFTAL 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL---------------LSLAIAVTW 178
L F K+ L+ I+ + ++ + ++++ + IA
Sbjct: 117 LEKFFDKKSLSKQWFISFIFGVIGVFLLSIGESHSHGSALNISTDQKVIGIILGLIAALT 176
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ + M ++ ++ F G + F I + +
Sbjct: 177 YSLYSWAAKKMIDRGVDSKASMGLIFGFGALILLPTLFFTGSNLFDEPINLYVVGYMMLI 236
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +F Y +K ST + PL+ + +V ++ + + + I ++ + +
Sbjct: 237 PMFLGYLLFGYALKTISASTATTLTLFEPLVAALFAVLLVGERLAPIGWIGMILIFLCLA 296
Query: 299 VYL 301
V
Sbjct: 297 VLS 299
>gi|281492030|ref|YP_003354010.1| drug/metabolite exporter family transporter [Lactococcus lactis
subsp. lactis KF147]
gi|281375739|gb|ADA65243.1| Transporter, drug/metabolite exporter family [Lactococcus lactis
subsp. lactis KF147]
Length = 295
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/297 (9%), Positives = 90/297 (30%), Gaps = 12/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G ++ +GI+ + L + +++ R+L+S + +
Sbjct: 1 MTKFKGIIYASLGAAFFGISSIIAGLLFNRCSIEPGWLVTTRMLFSGLLLLAWLAITKHN 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + ++K+ + + F+ ++ + + + P I + + ++
Sbjct: 61 IFSVWSSVKSSLRIVAFGIFG--VLFAQSSFLLSVYYGNAAIATILQSLGPSIIIIILAI 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
K L IIA L ++ + ++ + L + + P+
Sbjct: 119 KSKAIPRRLDIIAIFLSLIGVFLLVTNGNIGELSFSASALVWGLLSALGVCAYTLIPCPL 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + L + + + ++
Sbjct: 179 IKEHSPLSLVAWALLIGGVISNFLHPVTNLPKNFDQTDLLLVSLIVVVGTLLAYSLYINS 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+K + VG++ P+ I+ S L + + +V +++ + P
Sbjct: 239 LKYTEPHIVGMLGMLEPVTAILISTLFLGVSFLGFQQLGIFVVFLSLFLINFPAKKK 295
>gi|228953005|ref|ZP_04115066.1| Uncharacterized transporter [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228806623|gb|EEM53181.1| Uncharacterized transporter [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 304
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRLGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+F A ++ Y T S VTP+++ SVFL E++ I
Sbjct: 72 ---FFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAIFASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 FSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|297559889|ref|YP_003678863.1| hypothetical protein Ndas_0913 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844337|gb|ADH66357.1| protein of unknown function DUF6 transmembrane [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 326
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/281 (9%), Positives = 76/281 (27%), Gaps = 12/281 (4%)
Query: 31 FCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG++ L+ + +V S +++ R+ + ++ G L +
Sbjct: 29 VLLSLIWGMSFLFIKIGAEVLSPVQLSLGRMATGALPLLAVLLLRGGRLPRSPRLWGHMF 88
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG--SVFLKERLNHLQ 147
+L+ + + + S F + L L
Sbjct: 89 VAALLLNTVPFTLFGYAAQLIPSALMGIVNASTPLFGVVFSMLLLSDERPDRDRVLGLGI 148
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+L + + + + + + I F A+
Sbjct: 149 GFLGVLTVFGVWRSLDEVTVSDGDAVLGMLFVVGATVCYGIGTPYLRRFVAGSSHGALEL 208
Query: 208 ---------LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ VV + + + ++ A +
Sbjct: 209 STLQLLLGSVPLVVLVPLFTEMPTGVTWQVVAAVSTLGVFGTGVAYILQYAVVREAGATV 268
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y AP++ I + V +L + + + + ++++ +
Sbjct: 269 ATTVTYVAPVVAIAAGVVLLDETLSWNQPLGAVVIILGAAL 309
>gi|212693214|ref|ZP_03301342.1| hypothetical protein BACDOR_02724 [Bacteroides dorei DSM 17855]
gi|212664319|gb|EEB24891.1| hypothetical protein BACDOR_02724 [Bacteroides dorei DSM 17855]
Length = 302
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 87/285 (30%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG T + T+ L +S ++ +R + ++
Sbjct: 12 LMAIITVAIWGTTFVSTKILIQHGLSPSDIFFYRFTLAYLCMWCISY-------KKLFAN 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ +++ AL S +PV++ L +F ++
Sbjct: 65 RIKDELLLLLAGLCGGTIYFITENTALGITLASNVSLIVCTSPVLTTLLSYLFRRKEPFT 124
Query: 146 LQII-AALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
++ +++ ++ + ++ + L + + +
Sbjct: 125 RHLVYGSIMALIGVGLVVFNGSFILKINPLGDILSLTAALMWAFYCLILKQLDNHYSIVF 184
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L ++ + + I L + + F ++ +K
Sbjct: 185 ITRKVFFYGVLTILPMFLFRPLNWDNVLMMQPIVFGNLLFLGFVASMLCFIAWNACVKEL 244
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S I+ + I + +++ + +
Sbjct: 245 GAVKSTNYIYIIPLVTLLTSAVIINEKITWIALTGCFLILCGVYL 289
>gi|167552778|ref|ZP_02346529.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|168239229|ref|ZP_02664287.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|168244840|ref|ZP_02669772.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|194451611|ref|YP_002046040.1| hypothetical protein SeHA_C2206 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194737351|ref|YP_002115024.1| hypothetical protein SeSA_A2149 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197249871|ref|YP_002146034.1| hypothetical protein SeAg_B1129 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|200390788|ref|ZP_03217399.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|194409915|gb|ACF70134.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194712853|gb|ACF92074.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197213574|gb|ACH50971.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197288072|gb|EDY27459.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|199603233|gb|EDZ01779.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205322632|gb|EDZ10471.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205336388|gb|EDZ23152.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 63 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 182 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + V G++V A+V+ L + +
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPAR 293
>gi|160915962|ref|ZP_02078170.1| hypothetical protein EUBDOL_01987 [Eubacterium dolichum DSM 3991]
gi|158432438|gb|EDP10727.1| hypothetical protein EUBDOL_01987 [Eubacterium dolichum DSM 3991]
Length = 286
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 85/279 (30%), Gaps = 14/279 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + I+WG + T L+ +S ++ R + + L
Sbjct: 8 ILLVIVTIIWGGGFIATDGALDALSPFYIMMIRFMGAAILPCILCFKKLKNLEE------ 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+F+ +L + + F L +F V V+ +L ++++++ N
Sbjct: 62 --YIWRRGLFAGALLFLAFSFQTIGLQYTTPSKNAFLTAVNVVMVPYLLWLYMRKKPNQK 119
Query: 147 QIIAALLIILSLLIMTL-----HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+++A+++ ++ + +TL I + I + A + +
Sbjct: 120 EVLASIVCVIGIAFLTLKPDAVGLNIGDMLSIICAFFFATHMIVLERYSRHCDAIVMTAL 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + + + ++ + ++ +
Sbjct: 180 QMLGAGILSTICALLFETPPAQFELSAVGNLAYLIFISTLLAYLLQTFAQRFTTANSASL 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ L + S L + + ++ +++
Sbjct: 240 ILSMEALFATLFSFLFLHEELTLYMIFGAALIFCSVIYI 278
>gi|160896894|ref|YP_001562476.1| hypothetical protein Daci_1447 [Delftia acidovorans SPH-1]
gi|160362478|gb|ABX34091.1| protein of unknown function DUF6 transmembrane [Delftia acidovorans
SPH-1]
Length = 299
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 81/283 (28%), Gaps = 14/283 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + + ++ + E+ +R L + ++
Sbjct: 4 YLFPLIAVLIWSVNTVVSKMAADSIGAAEIGFYRWLVAAVLFTPFLLPSIWRQRA----D 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P ++V + ++ YA +TP++ + L + L + L+
Sbjct: 60 IRPLLPRLIVLGMLGMVIYQSLAYYAAHMTSATHMGLIGSLTPMMVLGLSTAMLGQALSR 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--------- 196
++ +L I + ++ L A F +
Sbjct: 120 GAVLGCVLAIAGVALVVSSGQPATLLTQGLNGGDALMFVAMLAYAVYNILLKRWPMPRLA 179
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+++ L I F L L + + ++ + R
Sbjct: 180 TVQLLYLQILVAVIAQLPLFLMAPRTGLNATNLPLVGFAGIMASIAAPLLWMMSVARIGP 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ V + L +P+ + + + +++
Sbjct: 240 GRSSMFFNLVPIFTAVIAFMALGEPLAAYHAVGGVLTIGGLLL 282
>gi|19705111|ref|NP_602606.1| integral membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713040|gb|AAL93905.1| Integral membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 287
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/293 (8%), Positives = 83/293 (28%), Gaps = 11/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ A ++W ++ L + + L + R L + I
Sbjct: 2 KNNSKAYFLIIAAVVIWSLSGLLVKAV-DADPLWISLIRSLGGGIFLLPYIF-------- 52
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
P + + + + + ++ VI
Sbjct: 53 --KEKIYPMKNILFGGIFMAIFLLAITITTRISSSAMAISMQYTAPMYVIGYGFYKSKEI 110
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + + I+ I +++ G ++ A+ F + +
Sbjct: 111 KFNKFIVFLLIFAGIIFNSITSMNGGNWWAIVSGITIGVAFVFYSYNLQKVKKGNLLGIV 170
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I + + + I +++ + ++ G++ +
Sbjct: 171 ALINIISAAFYGVLLIFRYSSPPSSFNEIIILSISGIVISGISYALYGEGLREVSMEKAM 230
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I+ P+L + + I +++++ +V + ++ N+ K+K
Sbjct: 231 IICLAEPVLNPIWVYLGKGEIPSMTTVIGSTLILLSAIVDITFSIKNNKKDKK 283
>gi|329894792|ref|ZP_08270593.1| Permease of the drug/metabolite transporter (DMT) superfamily
[gamma proteobacterium IMCC3088]
gi|328922781|gb|EGG30114.1| Permease of the drug/metabolite transporter (DMT) superfamily
[gamma proteobacterium IMCC3088]
Length = 291
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 95/292 (32%), Gaps = 10/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + A +LW + L + V ++ + S + +V
Sbjct: 2 NRSKQALVLGLSAVLLWSTVATAFKIALRYLDVFSLVCLASVVSACVLVCWLVAQGRMTE 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LL P ++ + +++ + A + +I L + L
Sbjct: 62 LLTALRNQPLKYFIM--ACINPLLYYVILLTAYDLLPAQQAQTINYTWAIILSLLAAPVL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
+RL ++A + L ++I+ L ++ +A+ +
Sbjct: 120 GQRLQRKDLVAIAVGYLGVVIIATEGSFHLGAIQSTLGLILALVSTLVWAGFWLANTRLQ 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
E + + + + + + GG L + F ++S + R
Sbjct: 180 EPKDVALAAMFVMSCPVAIAYLAYGGGLAQLSWQGLGAAVYIGLFEMGVTFLLWSQALSR 239
Query: 254 -AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ V + + AP+L +V +L +PI + F ++V A+++
Sbjct: 240 AVNVARVANLIFLAPVLSLVLIQLVLDEPIHPATVVGFALIVPAILLQQRDA 291
>gi|328943627|ref|ZP_08241092.1| DMT superfamily drug/metabolite transporter [Atopobium vaginae DSM
15829]
gi|327491596|gb|EGF23370.1| DMT superfamily drug/metabolite transporter [Atopobium vaginae DSM
15829]
Length = 328
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 88/291 (30%), Gaps = 11/291 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFS 75
A G + LWG+ ++ + V+ + + R +++ +F +
Sbjct: 37 AQHRLAYGIVLTLLGGSLWGMNATLSKVIMDTYAVTPMWLACVREIFTAI-LFLGLASRQ 95
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + M+V + ++ + ++ A+ + + V+ +
Sbjct: 96 TPRQLRDALHSKHALIMMVVMAFDVILLSQVSYLEAIFWTNSATATILQNLGVVLVMLYV 155
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA-------RKTI 188
V K + L ++ ++ L L + A + I
Sbjct: 156 CVTNKRLPRRREAWGLCLAVVGTYFISTGGDPTQLKLPLEGLAWGMACATAAAILAIQPI 215
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + G F+ + + A + G + L + +F
Sbjct: 216 KLMNRYGNFVVNGLAFLCAGLMLACYVQPWNSIPHFGVTGTLYLVFTVVLGTFGAYALFL 275
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+K ++ + PL +S+ ++ F +++I + +
Sbjct: 276 EGVKEVGSVKGVMLGTSEPLAATISTALVMGTMFSPGELFGFALIIIMVFL 326
>gi|308064013|gb|ADO05900.1| hypothetical protein HPSAT_05945 [Helicobacter pylori Sat464]
Length = 298
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 103/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSTLISACIGIVGVVLISDPSLENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|294629376|ref|ZP_06707936.1| membrane protein [Streptomyces sp. e14]
gi|292832709|gb|EFF91058.1| membrane protein [Streptomyces sp. e14]
Length = 293
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 90/293 (30%), Gaps = 4/293 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+G A +W + + ++ L V ++ R + +L V + L
Sbjct: 1 MLGLALAVLATAVWSGSFVTSRALHDSVPPVQHAFWRWVIALAVVAPFGARRAWRQRRLI 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ L+ A + + G + + S + V G+ R
Sbjct: 61 RRHGRYVLLASLLGVAVYNTLVNQAGLTTPAATMGMIMAASPVLMAVFERLGGTRLGLRR 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS---SEGFFIE 199
L A +++L+L IA ++ + F
Sbjct: 121 TAGLLTACAGVLLLTLGAGGGTGLTGGGLWMIAAACCFAGYSALLRRRPAELDGVAFLFT 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ L V + F L + ++ F +S I +
Sbjct: 181 TFLVGTVLLLPVQAASLAVQGGFRPTPGTLLPLLYVGVVSSAVAFFAWSRAIALIGAARA 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
G++ Y P+L+ + S +L + + + + +++ +V+ ++ +
Sbjct: 241 GLVYYLQPVLVALLSRLLLGESLGLPQALCMALILGGVVLGAGSGAGSARSAR 293
>gi|221133712|ref|ZP_03560017.1| hypothetical protein GHTCC_02174 [Glaciecola sp. HTCC2999]
Length = 287
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 92/281 (32%), Gaps = 9/281 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
IL G T L++Q + +S + + R L++ + + + + L + +
Sbjct: 13 FTVILLGGTALFSQII-PLSAMAITLGRSLFACVFLCVLVRFLGESVRL-----NSRRDY 66
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ ++A HW + A+ + + F PVI+V L F +L +++A
Sbjct: 67 LIGSLLGVLMAAHWVTYFLAMQLASVSVGIIALFTFPVITVLLEPFFEGIKLAWQDVVSA 126
Query: 152 LLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L++ + + IM I + V + R + + + +
Sbjct: 127 LVVFIGIAIMVPDGSIDNDVTYGIIVGVFSAFLYSLRNLMHRKYFSHYSGTRAMAFQTLI 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
E L I + + ++ + T ++ P
Sbjct: 187 ITGCILFLGIEEISTANTHSWILLAILGVFFTAVPHAAVAAALQHLRAKTFSLVACMQPF 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
IV ++ +L + + +V+ A V + S
Sbjct: 247 YGIVFAILLLGEDPRWQTIVGGLMVISAAVYETIHAQRQSR 287
>gi|30019002|ref|NP_830633.1| drug/metabolite exporter family protein [Bacillus cereus ATCC
14579]
gi|29894544|gb|AAP07834.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
Length = 303
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 285
Score = 36.0 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|51596941|ref|YP_071132.1| DMT superfamily drug/metabolite efflux protein [Yersinia
pseudotuberculosis IP 32953]
gi|51590223|emb|CAH21860.1| putative DMT Superfamily drug/metabolite efflux protein [Yersinia
pseudotuberculosis IP 32953]
Length = 305
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 84/278 (30%), Gaps = 5/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV--YFSGGLSLLKD 83
LF A I+W + + ++ + + +R L +L + ++ ++
Sbjct: 3 VLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVIRNWQAIRVY 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV--FLGSVFLKE 141
K + + LA + + AL V I + +V +
Sbjct: 63 WWKLMLLGMLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIAL 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LI L GI L + ++Y + + +
Sbjct: 123 GSLLSLGGLVWLISAGNPAQLLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPNWQSL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I ++ GF L L L + ++ G+ R +T I
Sbjct: 183 YMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTASI 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + +V L + + + I GI + +V+
Sbjct: 243 FMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVL 280
>gi|256843935|ref|ZP_05549422.1| permease [Lactobacillus crispatus 125-2-CHN]
gi|256613840|gb|EEU19042.1| permease [Lactobacillus crispatus 125-2-CHN]
Length = 306
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 93/295 (31%), Gaps = 12/295 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L +++ + + R++ S +
Sbjct: 3 TQKQRRLWAFLAGLACVMWGISGLFAKSLFNTSPEITPMWLSQIRMVTSGIILLIVAAVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + FV P +
Sbjct: 63 KQ--KPIATMKNKHDAWTIIAYGIFGLLPVQLFYFIVVQQANASIATILQFVGPFFVMGY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+V K+ + + ++AA+ + ++++ H +L +V + A
Sbjct: 121 LAVTHKQVMRRIDVLAAICAFIGVVLLATHGRFNHFALTPSVLFWGLLSAVGVATNTLIP 180
Query: 195 GFFI------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + H + + F + +
Sbjct: 181 ISVLKRVSSLVVTGWGLLSAGICLMIVHPQMPHIPNTPHVWLDVVAVIVIGTLIPFQLMT 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ K ST +++ P V SV + + I +VV+A + +
Sbjct: 241 NSLRFIKASTASLLDAFEPFSATVGSVICFGLVMTPMDWIGSILVVLAAMALNIS 295
>gi|212712245|ref|ZP_03320373.1| hypothetical protein PROVALCAL_03331 [Providencia alcalifaciens DSM
30120]
gi|212684991|gb|EEB44519.1| hypothetical protein PROVALCAL_03331 [Providencia alcalifaciens DSM
30120]
Length = 319
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 94/282 (33%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLE-VISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +LW + + + + +R W+L + L K
Sbjct: 17 FLFPLVAVLLWSVNAIVNKAAASAIDPAAISFYR--WALAFLVMTPFVLRSVLRHAKIVK 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + A + ++ YA T P+++V + L+
Sbjct: 75 QHWW--QLAILGALGMMLYQSLAYYAAHTVSATFMGVMNSFIPLLTVVISIFVLRVIPTV 132
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ ++L + L + G+ L + V +AY + +
Sbjct: 133 GIVVGSVLSLFGLAWLVSQGHPSSLLDNGLGQGELLMIVASAAYALYGVLTKRWAIQLSS 192
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + ++ F + L L L + ++ G+ R +
Sbjct: 193 WDSLYVQVFFGVLLLIPNFLMADDVSLNRDNIGLVLFAGIAASILAPAMWIQGVLRLGAN 252
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T I AP+ + +VF L + + + I GIV++ +++
Sbjct: 253 TTSIFMNLAPVFTAIIAVFTLGEELKSYHLIGGGIVLLGVML 294
>gi|152997471|ref|YP_001342306.1| hypothetical protein Mmwyl1_3468 [Marinomonas sp. MWYL1]
gi|150838395|gb|ABR72371.1| protein of unknown function DUF6 transmembrane [Marinomonas sp.
MWYL1]
Length = 297
Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 83/294 (28%), Gaps = 17/294 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+++ W + + + + R WSL + +
Sbjct: 4 FIYLLLPIFFWSGNYILGRLTVSNGIDPFSISFLR--WSLACLIILPFAYKKLWRERNII 61
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
KN + + + + + F L T + PV+ + + L + +
Sbjct: 62 AKNWPLLVLFGWLG--ICNYNLFLYIGLGTTSVTNAVLLNSIMPVMILITARLLLGNKTS 119
Query: 145 HLQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
LQ L+ L + + L + A++W+ Y P S
Sbjct: 120 WLQNTGILISTLGAITIVSRGSLETFLHLSFSQGDLWIITAAISWAIYSVLIAKRPKEMS 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F + ++ F + + + F ++ G+++
Sbjct: 180 LIGFFACTAIIGTLFQAPLFFLFGHSQLTDFTASNWGAIIYMGVFASIGAFLCWNTGVQK 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+T G + P+ I SV L + + + ++ + V +
Sbjct: 240 LGAATAGHFIHLLPVFSIGLSVIFLGEKLLNFHYVGITLIFSGIFVATILNKKK 293
>gi|330503503|ref|YP_004380372.1| hypothetical protein MDS_2589 [Pseudomonas mendocina NK-01]
gi|328917789|gb|AEB58620.1| hypothetical protein MDS_2589 [Pseudomonas mendocina NK-01]
Length = 314
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 84/289 (29%), Gaps = 18/289 (6%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + + ++ + ++ R + V +++ G L T G
Sbjct: 20 CAIWGSQQVAIKLAADDIAPMMQVALRSGIAALLVGMLLLWQRGWREWLSSTWLAGVLAG 79
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L + T + F Y ++ L + ERL LQ +
Sbjct: 80 VLFALEFFFIA-----LGLRHTTASHMAVFLYTAPIFSALGLHLLLPSERLRRLQWLGIA 134
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIP------------VGSSEGFFIEM 200
L +++ G A + A + G +
Sbjct: 135 LCFCGVVMAFGVGGSWAQIDAGILLGDALGLCAGMAWGATTVVVRGSRLSEAPAGLTLFY 194
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ L + I ++ +++ F + + + ++R S +
Sbjct: 195 QLAVAFVLLLGYALAVVDLDQLRWTPIAIASIVLQGVVVSFFTYLAWFWLLRRYLASNMA 254
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + PL + V +L +P+ I +V+ + + +
Sbjct: 255 VFSFMTPLFGVTFGVLVLDEPLTLNFVIGAALVLSGITLVSSEAWLRRR 303
>gi|126725583|ref|ZP_01741425.1| hypothetical protein RB2150_05243 [Rhodobacterales bacterium
HTCC2150]
gi|126704787|gb|EBA03878.1| hypothetical protein RB2150_05243 [Rhodobacterales bacterium
HTCC2150]
Length = 307
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/304 (9%), Positives = 72/304 (23%), Gaps = 7/304 (2%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ P + + ++WG + + LE + RV + +
Sbjct: 4 TSATPQNPGLFNWFLICLLGVIWGAAFMSVRISLESFGPWTTAALRVTIAASVLALIGRA 63
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
G S + + + + A LA+ Y + G +T +
Sbjct: 64 LDQGPSKISASAWPYVFITGTIAVAGPLALLSWGQQYVISAFAGIAMGTVPLLTLPLVAI 123
Query: 134 L------GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
G + + +A L+ +L + + T
Sbjct: 124 FSRDEGIGPRRIIGMIVGFIGLAVLIGPGALNSNGNPLEPFGQMACVLAACGYAIGSIVT 183
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
L + + + G + + I
Sbjct: 184 RRAPRIPPLAFATGALLVATAILLPIAIWHEGLVNSWPRRSTIALMYVAIGPTALAAVIR 243
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I A + + Y P + VF++ + + +++ + +
Sbjct: 244 VRVISTAGSMFMSLTSYMVPAWAALFGVFLMGETLTPNLIYALALILGGIAISQSRNFNK 303
Query: 308 SGKN 311
+
Sbjct: 304 LFRR 307
>gi|86750121|ref|YP_486617.1| hypothetical protein RPB_3004 [Rhodopseudomonas palustris HaA2]
gi|86573149|gb|ABD07706.1| Protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris HaA2]
Length = 308
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 86/294 (29%), Gaps = 6/294 (2%)
Query: 29 FVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ ILWG + + L+++ ++ R + +F + +
Sbjct: 15 LLIALSILWGASFFFVGVALKELPPFTIVFLRAAIAALVLFLIVWVRRIPMPRGVVGWWP 74
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ L F + G + + F V++ R+ +
Sbjct: 75 FVGMACLNFVVPFSCLVTGQTFISTGLASVLNATTPLFTVVVMAAAGEERLTARRVIGVV 134
Query: 148 IIAALLIILS---LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +L L G+ L A + AR+ + + + A
Sbjct: 135 AGVVGVAVLRGLDLREAETGIGVALCLCAALSYGLSALLARRLLIGFAPLTTATSQMLAA 194
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
V + L + + +F + R+ + V ++
Sbjct: 195 AIITGVVAACVDQPLSLPVPSLSVILAVVALGTLSTALGYVLFFRIVARSGSTNVMLVTL 254
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP--TVINSGKNKTKKS 316
P+ I+ +L + I + ++ A+++ I + + +T++S
Sbjct: 255 LIPVTAILLGTVVLHEDIGLRELMGGSMIASALLIIDGRALAWIEARRWRTERS 308
>gi|10956843|ref|NP_049063.1| hypothetical protein pNL1_p015 [Novosphingobium aromaticivorans]
gi|146275510|ref|YP_001165671.1| hypothetical protein Saro_3902 [Novosphingobium aromaticivorans DSM
12444]
gi|3378276|gb|AAD03859.1| unknown [Novosphingobium aromaticivorans]
gi|145322201|gb|ABP64145.1| protein of unknown function DUF6, transmembrane [Novosphingobium
aromaticivorans DSM 12444]
Length = 309
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 85/284 (29%), Gaps = 16/284 (5%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A W + P+ + + + S + + R + +L V +
Sbjct: 24 LLLCLASFFWALNPIVGRAAKDLLSPVTLAFWRWVVALVFVLPFAWRHLRD----DLSAI 79
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + A + + +L PV+++ + V +ER++ +
Sbjct: 80 VGGWRFLGLLGALGVGLFSFLVYQSLQFTTATNNLLLQSTMPVMTLLMPVVLFRERVHPI 139
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARKTIPVGSSEG 195
++ ALL I + + L +SAY + P
Sbjct: 140 LLVCALLSITGIAWIMTKGHPDYLRWDALNRGDLLAIIAVFLYSAYATFLRRAPAMHHLS 199
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + I AL L + + +F+ +
Sbjct: 200 LLVVLFGVGIAALSVPYAWHLWWAGLTVASPAALASLLYVGIFPSLLSYALFNRAVALVG 259
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+ + ++ +V +L + I +VV ++++
Sbjct: 260 SGRAGVYMNLPSVFGVLMAVPLLGERFAKYHLIGSLLVVASILL 303
>gi|323516242|gb|ADX90623.1| DMT family permease [Acinetobacter baumannii TCDC-AB0715]
Length = 306
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 85/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + L
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFLSVWRQRRLVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + + Y F +
Sbjct: 128 FAVFGSILSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKKWQLSLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVLFHLPLIFWFGLDALNAQNAPSAIYAGVFASLIAPLVWMLAVQQLGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + + L + T ++++ +++
Sbjct: 248 RTSIFMNLVPVFTAIIASIWLSEQWTIYHTFGGIMILVGIIM 289
>gi|322369264|ref|ZP_08043829.1| hypothetical protein ZOD2009_07244 [Haladaptatus paucihalophilus
DX253]
gi|320550996|gb|EFW92645.1| hypothetical protein ZOD2009_07244 [Haladaptatus paucihalophilus
DX253]
Length = 303
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 82/295 (27%), Gaps = 9/295 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G +F A + WG + + L L + R + + +
Sbjct: 1 MNGVMFALLA-LFWGGSFVSIDVGLHHFPPLLFAAVRYDVAGLLILGYAAVTTDRWKPQT 59
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
A ++ + + + S S +T V + L +
Sbjct: 60 RGDVLGIVTIGAFIIAGHHSLLYLGQEHVPGALAAVIVSLSPVLTAVFASTLFADEHVTP 119
Query: 143 LNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L + ++ ++ + + T + GI L+ LA A ++ S
Sbjct: 120 LGAVGLLCGVVGVAIVANPTPANLLSTDAVGIGLVFLAAASFALGSVLSQPFETGVSVPA 179
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + V + F I+ + +
Sbjct: 180 LQGWSMLFGSILIHAVSLGTGESPAAIDWSMSAVASLTYLVLISGVVAFLIYFHLLDTIG 239
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + ++ Y P++ + S +L + + + I F + + + + +
Sbjct: 240 ATELNLVGYLEPVVATLLSWLVLGELVASTTVIGFAAIFTGFALLKRDVLFDFWR 294
>gi|320158206|ref|YP_004190584.1| hypothetical protein VVM_00787 [Vibrio vulnificus MO6-24/O]
gi|319933518|gb|ADV88381.1| putative membrane protein [Vibrio vulnificus MO6-24/O]
Length = 302
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 84/291 (28%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++WG + + + + +R ++ + + + +
Sbjct: 3 YLLPLFTVLIWGGNSIVNKLAASAIEPSAMSFYRWFVAMAILTPFCL----PHVIRQWQQ 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT S + P+ISVFL L +R++
Sbjct: 59 IKPYLSKLAFLATLGMVLNQSLGYYAGLTTSASNMSLITSLVPLISVFLSVPLLGKRVSA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L +I + + L M + + + Y +
Sbjct: 119 LSLIGGAISLFGLAYMLGQGDVAFFIEQPVTQGDGLMVLAAIVYAAYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + E L + ++ I
Sbjct: 179 WTLIYMQGLFAVAMLTPLWLTSEQLLPSAEALPLIFYAGVAASILAPWMWVKAIDSIGAE 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ + + +L + + + +V+ +++ L +
Sbjct: 239 SSAMFMNLLPVVAVALATSVLGEQVHLYHFVGGLLVIFGVILSQLKPRKKA 289
>gi|282901098|ref|ZP_06309030.1| hypothetical protein CRC_02513 [Cylindrospermopsis raciborskii
CS-505]
gi|281193997|gb|EFA68962.1| hypothetical protein CRC_02513 [Cylindrospermopsis raciborskii
CS-505]
Length = 319
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/282 (10%), Positives = 93/282 (32%), Gaps = 9/282 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFA-IVYFSGGLSLLKDT 84
+++ + ++T+ E ++ +R + + + S +
Sbjct: 21 FVWLLLGVFILSFGAIFTRLSENELGPAGTSFNRYYIATIVLALWEGTQYGMNNSSNPNK 80
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K G+ + S+ + + +L ++ + TP+ +V G +F +R +
Sbjct: 81 SIQLKDWGIFLLSSVLGTATIFLWALSLTQTSVANSNLLHNFTPIFAVLGGWLFFGQRFD 140
Query: 145 HLQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++ L I+ + I++ S ++ + A + +
Sbjct: 141 YKFVLGMTLAIIGVAIISFGDFQEAVNSLYGDCLALLSAVFYALNYLVRENLRSKFSAST 200
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I + + F + + + F + L + + +K+
Sbjct: 201 ILLRTCLLGGCFTFLITLTTETQLFPTSWQTWLTVISLGVLCQIIGQGLLIHNLKQFSSG 260
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
V ++ PLL + + I + + + I F +++ + +
Sbjct: 261 FVTLLMLIEPLLTALFAWVIFGEKLSALNWIAFFLILTGIYI 302
Score = 39.9 bits (91), Expect = 0.55, Method: Composition-based stats.
Identities = 14/148 (9%), Positives = 35/148 (23%), Gaps = 5/148 (3%)
Query: 163 LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHF 222
+ L + V ++ + I + +W G G +
Sbjct: 15 YSFSWAFVWLLLGVFILSFGAIFTRLSENELGPAGTSFNRYYIATIVLALWEGTQYGMNN 74
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG-----IMEYTAPLLMIVSSVFI 277
L S V + + L+ ++ P+ ++
Sbjct: 75 SSNPNKSIQLKDWGIFLLSSVLGTATIFLWALSLTQTSVANSNLLHNFTPIFAVLGGWLF 134
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Q D + + +I + +
Sbjct: 135 FGQRFDYKFVLGMTLAIIGVAIISFGDF 162
>gi|260556846|ref|ZP_05829063.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
gi|260409452|gb|EEX02753.1| DMT family permease [Acinetobacter baumannii ATCC 19606]
Length = 295
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLLK----DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + A + I ++ + I + + ++F
Sbjct: 62 KIAFISSTPSKLSVFAQIAICAFLGIFSLFFFETIAYNHGAAAHVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 122 GRFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLINLHSITFNSDIILGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 288
>gi|218893379|ref|YP_002442248.1| hypothetical protein PLES_46671 [Pseudomonas aeruginosa LESB58]
gi|218773607|emb|CAW29421.1| putative membrane protein [Pseudomonas aeruginosa LESB58]
Length = 296
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 93/296 (31%), Gaps = 13/296 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +W + + + E+ R W L G+ L + L
Sbjct: 3 YLFPLLAVFIWAGNTVVNKLAVGVIQPAEIGFFR--WLLVGLALTPFMLGPVLRNRRYIL 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
N +L +AV+ YA + P++S+ L S L RLN
Sbjct: 61 ANLGKFVVLGLLG--MAVYQSLAYYAAALTSATNMGIILSLMPLMSLGLASSILAHRLNA 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ AL+ + ++++ G+ L + V AY + S +
Sbjct: 119 GALLGALVSLAGVVLVISQGHLGALLEHGVNLGDAMMIVATLAYAVYSVLLKKWSLKLPA 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ L + + + L L L + + +G+ R S
Sbjct: 179 MQLLYLQVLVAILALLPLYLLSPRTGLNAANLPLVLYAALFASIVAALAWMHGVARLGPS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + P++ + +L + + + + + +++ +
Sbjct: 239 RMALFFNLLPIITACIATLVLGERLTVHHLVGGALTLAGVLLAEFWQRRPARLRSA 294
>gi|212224956|ref|YP_002308192.1| permease [Thermococcus onnurineus NA1]
gi|212009913|gb|ACJ17295.1| permease [Thermococcus onnurineus NA1]
Length = 276
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/273 (9%), Positives = 80/273 (29%), Gaps = 13/273 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T + L+ + + +++R + + + +
Sbjct: 6 LILLGITAIWGFTFPAMKASLDYLPPILFLAYRFGIASLLMLII----------FRSRVL 55
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + L GF I L ++F + V + F+ L +RL
Sbjct: 56 KRETLKEGFVLGLTLFFGHGFQIVGLKYTTASNSAFITSLYVVFTPFIAYFILGDRLGGR 115
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIA--VTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+++ ++ + L +++ S + S + + +
Sbjct: 116 DVLSLIMALTGLYLISGASLNFNYGDLLTVLCAISFAFQIVLVQRFEKKDYLSLAFWQIL 175
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+F + + +P L F + + K ++
Sbjct: 176 WNFVFSLAFALLFESLVVPRDPMPWMGILYTAIFATVVAFTLQVKYQRDTKAHRAALIYS 235
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
P+ +++ + + + + +++ +
Sbjct: 236 AEPIFGHIAAFLTIGEILSPKGYLGAALIMAGI 268
>gi|161508161|ref|YP_001578132.1| permease [Lactobacillus helveticus DPC 4571]
gi|160349150|gb|ABX27824.1| Predicted permease [Lactobacillus helveticus DPC 4571]
Length = 323
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 87/285 (30%), Gaps = 16/285 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L +++ + + R++ S + V
Sbjct: 16 HKKTRRLWAFLAALACVMWGISGLFAKSLFNVSSEITPMWLSQIRMVTSGIILLIVAVIL 75
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + F+ P +
Sbjct: 76 KQ--KPIATMKNKHDAWVIIAYGVFGLLPVQLFYFIVVQKANASIATILQFIGPFFVLGY 133
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARK 186
++ K+ + L IIAA+ L + +++ H L++ A + A
Sbjct: 134 LTITHKQVMRRLDIIAAICAFLGVFLLSTHGQFDHLAITPAALFWGLLSAVGEAAYTLIP 193
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
V + + L V+ + + F I
Sbjct: 194 VNIVKKESSMVVTGWGMLFAGLSLVIIQPQFQAIPNK--SEVWLYTAAVVIIGTIIPFQI 251
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ ++ ST +++ P + SV + + + +
Sbjct: 252 MANALRYVVPSTASLLDAFEPFSATIGSVLVFGLIMMPMDWVGAV 296
>gi|221065107|ref|ZP_03541212.1| protein of unknown function DUF6 transmembrane [Comamonas
testosteroni KF-1]
gi|220710130|gb|EED65498.1| protein of unknown function DUF6 transmembrane [Comamonas
testosteroni KF-1]
Length = 299
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 86/283 (30%), Gaps = 14/283 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ++W + + ++ +S E+ R L + ++ +
Sbjct: 4 YLLPLGAVLIWSVNTVVSKLAADSISAAEIGFFRWLVAAVLFTPFVL----PSIWRQRAD 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P ++V + ++ YA +TP++ + L L + L H
Sbjct: 60 IKPLLPRIVVLGVLGMVIYQSLAYYAAHFTTATHMGIIGSLTPMLVLALAVFMLGQPLTH 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--------- 196
I +LL IL + ++ + L+ A F +
Sbjct: 120 GGIWGSLLAILGVALVVSSGRLSHLASEGLNLGDAMMFLAMLAYAVYNILLKRWPMPRLA 179
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+++ L + V + + L L + + ++ ++
Sbjct: 180 TVQLLYLQVLVAVVVQFPLYLFSPKTGLDASNLPLVGYAGIMASIAAPLLWMKAVQTLGP 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ + + F L +P+ + + + +++
Sbjct: 240 GRSSMFFNLIPVFTALIAAFALNEPLAGYHAVGGIMTIAGLLL 282
>gi|313159434|gb|EFR58797.1| putative membrane protein [Alistipes sp. HGB5]
Length = 312
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 97/304 (31%), Gaps = 24/304 (7%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-------EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G ++ A ++WG+ + + VS + +R+L + + ++
Sbjct: 5 KLKGHAALWVANLVWGLNAPIGKSVLWSEHNPGGVSPFALSVYRMLGACLLFWSVSLFLP 64
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ V +L S + ++ F++ L +S V PV+++ L
Sbjct: 65 RER------VARRDIVLLLFASVFGIQLNQMLFLWGLSLTSPIDSSIIATVVPVLTMVLA 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFA 184
++FL+E + L+ L L++ L S G L ++ +
Sbjct: 119 TLFLREPITWLKAGGVFLGCAGALLLILVSRHGTGHTSSVKGDVLCLVSAVSYATFLTAF 178
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
R I S M + A V + + ++ L +
Sbjct: 179 RNVIVKYSPVTTMKWMFLFAAVVAAAVYYRPLAAVDYAALAPRTWAGIGYVVVCSTFLSY 238
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G + + + V + Y P++ ++ SV I + V + +
Sbjct: 239 FMVPIGQRYLRPTVVSMYNYVQPVVAVLFSVAIGLDSFGFTKAAAALCVFAGVWLVTKSK 298
Query: 305 VINS 308
Sbjct: 299 SRAQ 302
>gi|292656569|ref|YP_003536466.1| putative integral membrane protein [Haloferax volcanii DS2]
gi|291371528|gb|ADE03755.1| putative integral membrane protein (TBD) [Haloferax volcanii DS2]
Length = 311
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 80/295 (27%), Gaps = 11/295 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY-----FSGGLSLL 81
LFV A + WG + + LE + + R + + +Y G +
Sbjct: 9 LFVVLAAV-WGSAFMAIKAGLEFFPPVLFAALRYDVAGVVMLAYALYATDSPLPRGRAEW 67
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + A L+ + + +
Sbjct: 68 TEVAIGAVFLIAAYHALLFIGETDPTVTSAAAAVTVSLSPVLTTGFARLLLPSERLTPLG 127
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF----ARKTIPVGSSEGFF 197
+ L + + ++ L L +G + L I +A+ R+ E
Sbjct: 128 VVGLLLGLVGVAVLSELDPSNLLAGGTVAKLLIFGAAAAFALGSVLTRRVDSELPIETME 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+L + L ++ F I+ + R
Sbjct: 188 AWSMLLGAGLMHVASVGLGERPGAVVLNVQSVAALAYLSLAASALGFLIYFDLLARLGPI 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ ++ Y AP+ +S L + F ++ + V+ + + +
Sbjct: 248 EINLVSYVAPVFAALSGWAFLSEVPTPSTVGGFALIFLGFVLLKRGAIRRELRYR 302
>gi|159045827|ref|YP_001534621.1| hypothetical protein Dshi_3287 [Dinoroseobacter shibae DFL 12]
gi|157913587|gb|ABV95020.1| protein of unknown function DUF6 transmembrane [Dinoroseobacter
shibae DFL 12]
Length = 288
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/285 (10%), Positives = 73/285 (25%), Gaps = 2/285 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ + ++W + + L +S R L S + L +
Sbjct: 4 LRALVMGLGFALMWSSAFTSARIIVAAAPPLTTLSLRFLISGLIAVGIALALGQTWRLSR 63
Query: 83 DTLKNPKAVGMLVFSAT-ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K G+ + L + A L T V +
Sbjct: 64 TQWKATFLFGLCQNALYLGLNFVAMQTVQASLAAIIASTMPLVVALASWLVLRERLRPLA 123
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L IA +++I+ + + +L I V A+ +
Sbjct: 124 MVGLLAGIAGVVLIMGARLQAGVDLVGVLYCGIGVLALAFATLALRTASSGGNLLMVVGL 183
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + A+ + + F + ++ + R
Sbjct: 184 QMLVGAVALALVGLPTETLEVTWSWQLVVAFAYTTLVPGLAATFVWFLLVDRIGAVRAAT 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ P+ + + +L + + + IV + ++ L
Sbjct: 244 FHFLNPVFGVAIAAALLGEALGARDVVGVAIVTLGILAVQLSRAR 288
>gi|89889966|ref|ZP_01201477.1| putative transmembrane permease [Flavobacteria bacterium BBFL7]
gi|89518239|gb|EAS20895.1| putative transmembrane permease [Flavobacteria bacterium BBFL7]
Length = 298
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 89/299 (29%), Gaps = 20/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + F + + + + E V + +RV+ + +
Sbjct: 2 SKRAVAIICGFLVALFYAYNFTAAKEVTPEFVGPYGLTWYRVVITCVIFWVIATIVGP-- 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K+ + + + + + + + F+ L S TP+I + L ++F
Sbjct: 60 ---KEKVPLKELPLLALAAFCGVGFNMVTFMKGLSLTAPISASVLMVTTPIIVLLLSAIF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTL-------------HSGIPLLSLAIAVTWSAYCFAR 185
LKERL +I+ L+ ++ G L+ + A+
Sbjct: 117 LKERLYASRILGILIGFSGAALLIFLSNSGSNENATNPALGNFLVFINAVSYSFYIILAK 176
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
K + + + + + +
Sbjct: 177 KLTTRYHVFTLMKWLYLFGVIFITPFGITEGLSFDFSTANTDTLWYIGYVVLFATFGTYM 236
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ K S V + Y PLL + +V + K I + I G++ + + +P
Sbjct: 237 LNIIAIRTLKPSVVAVFVYLQPLLATLIAVGLNKDEITLYKLIAGGLIFTGVFITSIPK 295
>gi|34762689|ref|ZP_00143680.1| Transporter, Drug/Metabolite Exporter family [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27887646|gb|EAA24724.1| Transporter, Drug/Metabolite Exporter family [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 301
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 88/302 (29%), Gaps = 11/302 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
G L F LWGI + FL + V+ +I +R++ + + + Y
Sbjct: 1 MKKDNNFGMLTTFIGGTLWGINGVMGSFLFLNKNVTTAWLIPYRLMLAGLLLLGYLYYKK 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + +++F + + A+ + + + P + +
Sbjct: 61 GS-KIFDILKNPKDLFQIILFGLIGMLGTQYTYFSAIQYSNAAIATVLTYFGPTLVLVFI 119
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTI 188
+ + + +++A +L + ++ H L + S + +
Sbjct: 120 CLKERRKPLKYELVAIVLSSFGVFLLATHGNITSLQISFKALIWGMLSALSVVFYTVQPE 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ G + I V + + ++ F ++
Sbjct: 180 KLLKKYGPPTVVAWGMIIGGIAVTFMTKPWNIDIIFDFTTFFVLMLIILFGTITAFILYL 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G+ + I+ P+ + ++ L + I F ++ + +
Sbjct: 240 TGVNIIGPTKASIIACIEPVAATICAILFLGISFGFLDFIGFICIISTIFIVAYFDKKTR 299
Query: 309 GK 310
K
Sbjct: 300 KK 301
>gi|332162423|ref|YP_004299000.1| hypothetical protein YE105_C2801 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666653|gb|ADZ43297.1| hypothetical protein YE105_C2801 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860179|emb|CBX70499.1| hypothetical protein YEW_AV04290 [Yersinia enterocolitica W22703]
Length = 293
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 93/293 (31%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A I+W I + ++ + + +R + +L + ++ +
Sbjct: 3 VLFPLFAVIIWSINAVVSKVSATAIDPAAISFYRWVLALLTLTPFLL----MGVIRNWQA 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + ++ YA + + P+++V + V L+
Sbjct: 59 IRVYWWKLMILGLLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVVLRVAPTI 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L + L+ + GI L + ++Y + +
Sbjct: 119 GIALGSVLSLGGLVWLVSAGNPAQLLQHGIGKGELMMFGASASYALYGVLTKRWAIQLPN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F L L L + ++ +G+ R +
Sbjct: 179 WQSLYIQIVFGVVLLLPNFLLAADVQLTAQNIPLVLFAGIPASIIAPYLWIHGVMRLGAN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T I P+ + +V L + + + I GI + +++ K
Sbjct: 239 TASIFMNLTPVFTAIIAVTFLHEQLHSYHLIGGGITLAGVILAQRLRTPLRRK 291
>gi|313897807|ref|ZP_07831348.1| putative membrane protein [Clostridium sp. HGF2]
gi|312957342|gb|EFR38969.1| putative membrane protein [Clostridium sp. HGF2]
Length = 294
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/269 (9%), Positives = 76/269 (28%), Gaps = 13/269 (4%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
L+ +S ++ R + + K + +G + + L + +
Sbjct: 27 ALDALSPFYIMMIRFVGAAVFPLLICW--------KKLRRLDRATIGHGIVTGIFLFLAF 78
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTL-- 163
F + L +F V +L + R + ++IA+LL I+ + ++TL
Sbjct: 79 AFQTFGLKYSTPSKNAFLTATNVVFVPYLLWLLWHRRPSRKELIASLLCIVGIALLTLKK 138
Query: 164 ---HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
G + + + A + + + + +
Sbjct: 139 DALMLGFGDMLSLVCALFFALHIIALERYSAHVDTVCMTALQMMTAGVISTICALTLEQP 198
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ + + ++ K ++ ++ L + S +L +
Sbjct: 199 PTSFNWHAAGNVAYLIFVSTLLAYLLQTFAQKFTTANSASLILSMEALFASIFSFLLLGE 258
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + ++ +++
Sbjct: 259 VMSPPMILGACLIFSSILYIEYKPARKKK 287
>gi|260777846|ref|ZP_05886739.1| putative membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260605859|gb|EEX32144.1| putative membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 299
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 89/291 (30%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG + + + + R +++ + + + + T+
Sbjct: 3 YLLPLFTVFIWGGNAIINKMAASVIEPSAMSFFRWFFAMLVLTPFCL----PQVIKQWTV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA +T + + P++SVF+ L + ++
Sbjct: 59 IKPHLNKLAFLALLGMVLNQSLGYYAGVTTTASNMALITSLVPLLSVFMSVPLLGKSISP 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L II ++ + L M + + + Y I
Sbjct: 119 LSIIGGIISLAGLSFMLGQGDMVFFLHQSVTEGDALMVLAAICYATYCVLIKRWKMPLSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + EH +L + ++ I
Sbjct: 179 WILIYMQGLFAVLILTPLWLSSEHLAPTPGSVSLIAYASLAGSLLAPWMWVKAIDAIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ + + +L + I+ + +V+ +++ + V +
Sbjct: 239 SSAMFMNLLPVVAVALAATLLGENIEGYHVMGGIMVISGVILSQIKRVRRT 289
>gi|257464235|ref|ZP_05628614.1| hypothetical protein FuD12_10396 [Fusobacterium sp. D12]
gi|317061755|ref|ZP_07926240.1| conserved hypothetical protein [Fusobacterium sp. D12]
gi|313687431|gb|EFS24266.1| conserved hypothetical protein [Fusobacterium sp. D12]
Length = 290
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 72/292 (24%), Gaps = 4/292 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S LF+ A +WG T+ S +++ R L + +F + Y
Sbjct: 1 MSNQRYKVLLFMIAA--IWGGGFPITKIALNYGASPNAILAVRFLSASALLFLYLCYKKE 58
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + TL + V + G + F + + +
Sbjct: 59 KIEKSEITLGLFTGSLLSVGFSLQTVGLSYTTASKNAFLTGTYVVLTPFFAWLFTRKMPR 118
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ LL I L AI + +
Sbjct: 119 KQIYLSCFLSLTGIFLLSWSGENFSMQFGDILSLLCAIFYAIQISYMSARIGNKNPLHVN 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F +M I L Y + F + + + K +
Sbjct: 179 FFQMLSAGILTLIYNILLEEGSVFSFPENEVQFFSVAFLVIFNTLLAYSAQTVAQKYVES 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V ++ T L S L + + + ++ +++ +
Sbjct: 239 GLVCLILSTEILFGAFISFLFLGEILSFQSLLGGFLMFLSIFLAEFDWKKKK 290
>gi|220931881|ref|YP_002508789.1| permease of the drug/metabolite transporter (DMT) superfamily
[Halothermothrix orenii H 168]
gi|219993191|gb|ACL69794.1| permease of the drug/metabolite transporter (DMT) superfamily
[Halothermothrix orenii H 168]
Length = 316
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 16/279 (5%)
Query: 35 ILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
LWG T L+T+ L + + R L ++ G + +N + +
Sbjct: 16 FLWGSTFLFTKVCLRFFPPVFLGGLRYLTGGLIFAIILILKYGYSHTITTIKRNFAGIVL 75
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
+ F+ +AV + L+ + PV+ FL + LKE+ +I+ ++
Sbjct: 76 VGFTGVTIAVLFQNL--GLMYTTASSAALLNSFEPVMVFFLSILILKEKATLNKILGLII 133
Query: 154 IILSLLIMTLHSG-------------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L ++I+ + L+ +++ + +
Sbjct: 134 GFLGVIIIISNGNLSSLFSLNTNLLGNLLMLVSLLGYSFYTIIGKIVLNDTPPLIVVGVS 193
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ L + + F+ L + ++ ++ S
Sbjct: 194 TLFGGITLLIPSFFLEQIPDLTLTPPEVWFSFIYMATLPTCLAYYLYFKLLQNINASKTV 253
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ PL + ILK+P++ + +V+ +
Sbjct: 254 GIILMIPLYGSGLGILILKEPVNPWFVLGSILVLTGAWL 292
>gi|161870448|ref|YP_001599620.1| hypothetical protein NMCC_1503 [Neisseria meningitidis 053442]
gi|161596001|gb|ABX73661.1| conserved hypothetical protein [Neisseria meningitidis 053442]
Length = 287
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 82/287 (28%), Gaps = 14/287 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ A + I + + + E++ R+L+S + A V
Sbjct: 1 MLVAAACFTIMNVLIKEASAKFTLGSGELVFWRMLFSTVALGAAAVLRRDTFR------- 53
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + YA+ + + + + LKER++
Sbjct: 54 -TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFSFLILKERISVY 112
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV---L 203
LL ++++ S A + + E
Sbjct: 113 TQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELSLAGEPGWRVVF 172
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + + ++ + + P ++L G+ + K TV +
Sbjct: 173 YLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYKVGDKFTVASLS 232
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y + +S+ F L + + + I++++ ++ + +
Sbjct: 233 YMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQR 279
>gi|119896870|ref|YP_932083.1| hypothetical protein azo0579 [Azoarcus sp. BH72]
gi|119669283|emb|CAL93196.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 318
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 72/282 (25%), Gaps = 17/282 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G F + + + + QV +++ R+ +SLP S
Sbjct: 25 RALGFAFAIAGAVGFSFKAILVKLAYRHQVDAETLLALRMAFSLPFFLVMGWAAS---RR 81
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
D L V M + L L F+ P I + L ++FL
Sbjct: 82 AADRLSARDWVWMAGLGLFGYYLASYLDFLGLDYISAALERLILFLYPTIVIVLSALFLG 141
Query: 141 ERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFARKTI 188
+ + + A L L + + H G L+ + + +
Sbjct: 142 KPITRRMLAALALCYLGIALAVGHDLDVSGTVQEVALGCALVFASAVSYALYLMGNGQVV 201
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S A + + S
Sbjct: 202 GRLGSSRVTAYASSFACFFSLGQFVLMRPLEVLLAQAWQVYAYAGLMTVFSTVAPVWMVS 261
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
I+R V + AP + ++ IL + I + +
Sbjct: 262 EAIRRLGAGPVSLTGTLAPAITMLLGWIILGEQIGLFQLLGM 303
>gi|56552420|ref|YP_163259.1| hypothetical protein ZMO1524 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761539|ref|ZP_04759626.1| protein of unknown function DUF6 transmembrane [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|260753904|ref|YP_003226797.1| hypothetical protein Za10_1679 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543994|gb|AAV90148.1| protein of unknown function DUF6 transmembrane [Zymomonas mobilis
subsp. mobilis ZM4]
gi|241373847|gb|EER63380.1| protein of unknown function DUF6 transmembrane [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|258553267|gb|ACV76213.1| protein of unknown function DUF6 transmembrane [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 309
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 101/291 (34%), Gaps = 13/291 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G AY+ + I+ ++ L+ ++ E+ + + P +
Sbjct: 3 KKGITIALIAYLAFTISDAGSKLLDGKINAFEIAFLGGVIAAPAIPLM-----RKPHESY 57
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + A +A+ F + A F+ P + +FL E+
Sbjct: 58 LNIFGFYDFKIWLIRAVCVALCTFFSVVAFTRLPMTEAMALLFLLPFFVNLIALIFLHEK 117
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS-------SEG 195
++ + +A ++ + +I+ PL +A A+C +
Sbjct: 118 ISFAKWVALIIGFIGTVIILRPGIRPLGVGHLAALAGAFCTGASWAVFRATNKKKGGLVT 177
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + + +V +G + +L+ YGL ++ + + A+
Sbjct: 178 KPSRLSLYSASVVGPIVIDGAMTWNSWVTPTALQWFYLLIYGLFAAWGQIMMMIAAEYAE 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+T+ + +Y+ + ++ S + QP+D + + ++ ++ +
Sbjct: 238 ANTIALPQYSQMVWTVIFSYLVFHQPVDFISFVGIAVIFLSGYLTWRSGRK 288
>gi|324324511|gb|ADY19771.1| transporter, EamA family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 316
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/305 (15%), Positives = 104/305 (34%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L A +Y
Sbjct: 130 YKDDALNMKKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLMSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G G F ++ L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGGLQVGVMPFTFSVHAILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + V + ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAVGIIVVNRTPAKQKM 309
Query: 310 KNKTK 314
+ + +
Sbjct: 310 EQEKQ 314
>gi|298290935|ref|YP_003692874.1| hypothetical protein Snov_0931 [Starkeya novella DSM 506]
gi|296927446|gb|ADH88255.1| protein of unknown function DUF6 transmembrane [Starkeya novella
DSM 506]
Length = 340
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/323 (10%), Positives = 82/323 (25%), Gaps = 26/323 (8%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRV 60
M S S N + L V A G +P+ ++ + R+
Sbjct: 10 MSTSLDAAVESVASSAMNEARLRRQAFLAVLLAAFCIGFSPVLVRY-GDAGPAAIGFWRL 68
Query: 61 LWSLPGVFFAIVY-----FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTR 115
++L + +A + F L
Sbjct: 69 FFALGPTALWAWAEHRAERRRFAASATPRPLPIRAYAFAALAGVFFGADLIAFHVGLANT 128
Query: 116 QGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL----- 170
+ V + G +FL ER + ++A + L + L S
Sbjct: 129 STANGVLLGNLAVVFVLIFGWLFLGERPSRGLLLALATALAGTLFIILSSAGHSHGAGPR 188
Query: 171 ---------------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
A + + + + G + A+ ++W
Sbjct: 189 AVSVFGDVLCVAAALFYAGYMLMTRVVRRAGSNGAAALGGGTAALIATVTGAVTCLIWAV 248
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
+G + + ++ + ++ + R + ++ ++ + +
Sbjct: 249 ATGEVLVPQSLQGLLAVVGLGIVAHATGQGLTTFALGRLPAGLISVVLLLQIVVGVTFAA 308
Query: 276 FILKQPIDTVRTIVFGIVVIAMV 298
+ + + I +VV +
Sbjct: 309 LLFGEIPSLMVIIGGTLVVAGVA 331
>gi|161616860|ref|YP_001590825.1| hypothetical protein SPAB_04681 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194472037|ref|ZP_03078021.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194737119|ref|YP_002116706.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195873790|ref|ZP_02698810.2| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197251164|ref|YP_002148701.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197262491|ref|ZP_03162565.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197300707|ref|ZP_02660444.2| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|198244739|ref|YP_002217721.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|205360344|ref|ZP_02682445.2| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|213051542|ref|ZP_03344420.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213425200|ref|ZP_03357950.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213650219|ref|ZP_03380272.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|213850357|ref|ZP_03381255.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
gi|161366224|gb|ABX69992.1| hypothetical protein SPAB_04681 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194458401|gb|EDX47240.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194712621|gb|ACF91842.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195632302|gb|EDX50786.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197214867|gb|ACH52264.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197240746|gb|EDY23366.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197291527|gb|EDY30879.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197939255|gb|ACH76588.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|205350380|gb|EDZ37011.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|322612929|gb|EFY09881.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322618994|gb|EFY15881.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322625229|gb|EFY22056.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322630103|gb|EFY26876.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322634295|gb|EFY31030.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322635804|gb|EFY32513.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322642993|gb|EFY39571.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322645014|gb|EFY41545.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322651924|gb|EFY48292.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322656825|gb|EFY53112.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322661089|gb|EFY57317.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322662423|gb|EFY58636.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322667301|gb|EFY63467.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322674322|gb|EFY70415.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322678470|gb|EFY74531.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322680976|gb|EFY77010.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322687088|gb|EFY83061.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323193190|gb|EFZ78408.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323198271|gb|EFZ83377.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323200889|gb|EFZ85959.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323206643|gb|EFZ91601.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323210445|gb|EFZ95331.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323216267|gb|EGA00995.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323220490|gb|EGA04944.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323228468|gb|EGA12599.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323234289|gb|EGA18377.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323238601|gb|EGA22657.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323244793|gb|EGA28797.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323245832|gb|EGA29822.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323250985|gb|EGA34861.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323257267|gb|EGA40966.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323262191|gb|EGA45752.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323264598|gb|EGA48102.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323268887|gb|EGA52345.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326625508|gb|EGE31853.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
Length = 315
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 103/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ + +S + R+L++ G+ F G
Sbjct: 18 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVTFSFMHGD 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L+FS F+ + + F++P I V ++
Sbjct: 76 KIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R L + A L ++ ++ H L IA ++A + +
Sbjct: 136 RRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLI 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + ++ G HF + F + S F ++ G
Sbjct: 196 AQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGA 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + S+ +L + +++ ++++ L + +
Sbjct: 256 QLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRAR 313
>gi|146282804|ref|YP_001172957.1| hypothetical protein PST_2463 [Pseudomonas stutzeri A1501]
gi|145571009|gb|ABP80115.1| membrane protein, putative [Pseudomonas stutzeri A1501]
Length = 276
Score = 66.5 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 75/266 (28%), Gaps = 3/266 (1%)
Query: 36 LWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
++G++ + + E S L + R L+++ + +L + A+G L+
Sbjct: 1 MFGLSGVLGKLAES-SALVITFGRALFAVLALLLVAQLLRPSGALPSWRQRAGLALGGLL 59
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
A L I + SF V+ L + + +
Sbjct: 60 LGAHWLTFFIAVKIAGVGIATLGFASF--PAFTVLLEGLLFRERTRAVEFAMVGLVTAGL 117
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
L + P L V + + G L +
Sbjct: 118 LLVAPTFDLGNGPTTGLLYGVLSGLLFALLSLLNRAVTRGLDPVRSALWQNLAIFAGLLP 177
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
F G + + L +F ++ K T ++ P+ I +
Sbjct: 178 FCGAAIPTIPAQDWLWLALLGVLCTGLAHSLFVASLRVLKARTTSVIFALEPVYGIAFAW 237
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYL 301
++ + I +++IA V+
Sbjct: 238 WLFNEQPTLRMLIGGALIIIASVITS 263
>gi|108761107|ref|YP_634844.1| hypothetical protein MXAN_6727 [Myxococcus xanthus DK 1622]
gi|108464987|gb|ABF90172.1| transporter, EamA family [Myxococcus xanthus DK 1622]
Length = 312
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 77/277 (27%), Gaps = 4/277 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ YI+WG T L ++ + ++ R + + +F + + +
Sbjct: 35 VASILSLYIIWGSTYLAIRWALEGGMPPFQMSGVRFVLAGALLFAVLWLRGAPVPTARQW 94
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ +L+ V + + T + G +
Sbjct: 95 GASALVGLLLLGVGNGGLVFAQQSV--PSGVAALVVGSLPLWTALFGGLFGQWPRRAERW 152
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L + +++L+L +P L++ ++ A +L
Sbjct: 153 GLAVGFGGIVLLNLGGDVGGGLLPTLAMLVSPMSWALGSVWSRRLPMPRGLMSTAAQMLC 212
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ F + + + Y ++ A+ S Y
Sbjct: 213 GGVVMLGFSLLIGERPTAMPTPKAVLAFFYLVVFGSLVGYSAYGYLLRNARPSLATSYAY 272
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+L + + + + + G ++ A+V+
Sbjct: 273 VNPVLAVFLGGLLAGETMTPTAWLAMGAILGAVVLLT 309
>gi|75761099|ref|ZP_00741095.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228901221|ref|ZP_04065420.1| Uncharacterized transporter [Bacillus thuringiensis IBL 4222]
gi|74491418|gb|EAO54638.1| Transporter, drug/metabolite exporter family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228858432|gb|EEN02893.1| Uncharacterized transporter [Bacillus thuringiensis IBL 4222]
Length = 304
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ L S+FL E++ I
Sbjct: 72 ---IFMFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILASIFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + +++ G + + A + F +T + + +
Sbjct: 129 GGVISFIGIALISFSQGDSIQLNSGGLFILFAAISESLYFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + L + +Y I A + M
Sbjct: 189 LSSTVCMLIFLPGMYQEILAAPLEVNVSVLYLGLFPTVLPYIALAYIISHAGAAEATSMR 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPVTACFIAWLWLGEVPTLVS 271
>gi|295103916|emb|CBL01460.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Faecalibacterium prausnitzii SL3/3]
Length = 305
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/294 (7%), Positives = 85/294 (28%), Gaps = 12/294 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF-------SGGLSL 80
+ + ++WG + + ++ R ++ + + F
Sbjct: 9 MLLMLCALIWGTAFVAQSAGSGMGAFSFLAGRSWMAVLVLIPTVKAFDALHHRQGRPDGK 68
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + + + + + T+L + + + V+ V + +FL
Sbjct: 69 PKSSAERKQLLKAGLVCGTLLFLASAAQQLGITLDPSTAKAGFLTAMYVVLVPVFGLFLG 128
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEG 195
+ + ++ + ++ L ++ + G + + + ++ +G
Sbjct: 129 RKGSAQLWVSMAIAVVGLYLLCMKDGFGSIQSSDGLLLLCAVLFSFQIMAVDHFSPQMDG 188
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + ++ V L + + + + G +
Sbjct: 189 VRLSLVEFFVVSVESTVAAFLFEQPAMAEFVTYAGPILYCGVMSSGVAYTLQILGQRDLN 248
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + + +L Q + + ++ A+V+ LP
Sbjct: 249 PAVASLIMCLESVFSALGGWLLLHQNLSFRESTGCVLLFAAVVLAQLPLGRLMR 302
>gi|238922286|ref|YP_002935800.1| hypothetical protein EUBELI_20522 [Eubacterium eligens ATCC 27750]
gi|238873958|gb|ACR73666.1| Hypothetical protein EUBELI_20522 [Eubacterium eligens ATCC 27750]
Length = 309
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/305 (10%), Positives = 83/305 (27%), Gaps = 18/305 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYF----- 74
+ + G+L + +WG + T V + R + + IV
Sbjct: 1 MNNIKGSLILLLTAFIWGTAFVAQTSGAGAVGTFTFNAARSIVGALFLAVVIVIKNVLDK 60
Query: 75 ----SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALL--------TRQGFLTSF 122
++ ++ +G + +L F Y + + + +
Sbjct: 61 RNNSGKVINTENESHLQTWPLGAGIICGIVLFAAMTFQQYGISVYPQGVAASGRSGFITA 120
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC 182
+Y V + + + L + + L
Sbjct: 121 TYVVMVSVVSVFMGKKMHWITGVSVAGCVAGMYLLCMSGGVSGIYLGDVLVFLGAICFTT 180
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
S++ + + A+ F+ F + L L
Sbjct: 181 HILVIDKFSSADSMKMSCIQFMVIAIISTFAMIFTENVTFAGIKVALIPILYAGVLSGGI 240
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + G K A+ S I+ + +++ +L + + + +V A+++ +
Sbjct: 241 AYTLQMVGQKYAQPSVASIVMSLESVFAVLAGWIVLGELLKPKEIMGCVLVFTAVILAQI 300
Query: 303 PTVIN 307
P +
Sbjct: 301 PGMKK 305
>gi|237746312|ref|ZP_04576792.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377663|gb|EEO27754.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 298
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 91/285 (31%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG T + T+ L ++ +++ +R + + ++
Sbjct: 11 LIALVTVAIWGTTFVSTKVLIRSGLTPVDIFFYRFVLAYLCIWII-------SPKRWFAD 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A+++ AL S + P+++ FL +F +
Sbjct: 64 SVKDELWLAAAGFCGGALYFVTENTALDLTLVSNVSLIVCIAPLLTAFLVILFYRNEKVR 123
Query: 146 LQIIAA-LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++A ++ ++ + ++ + L + + + L
Sbjct: 124 KTLLAGSVMALVGVALVVFNGHFILKLSPAGDLLTVAAAFSWAFYCLILKRLDLRYPTLF 183
Query: 205 IPALFYVV----------WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
I + + F+ T L + + F +++ +K
Sbjct: 184 ITRKVFFYGVVTLLPFLPFLPLHFEAAIFMQPAVWTNLLFLSLVASMLCFIMWNMAVKEL 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S +L +P++TV +++ + +
Sbjct: 244 GPVLATNYIYIVPLIAMLTSAVLLGEPVNTVMLGGCALILAGVFL 288
Score = 36.0 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 36/138 (26%), Gaps = 1/138 (0%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
L VT + + + V G L Y+ S F
Sbjct: 7 FWFHLIALVTVAIWGTTFVSTKVLIRSGLTPVDIFFYRFVLAYLCIWIISPKRWFADSVK 66
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVR 286
+ + F + + +S V ++ APLL + + +
Sbjct: 67 DELWLAAAGFCGGALYFVTENTALDLTLVSNVSLIVCIAPLLTAFLVILFYRNEKVRKTL 126
Query: 287 TIVFGIVVIAMVVYLLPT 304
+ ++ + + +
Sbjct: 127 LAGSVMALVGVALVVFNG 144
>gi|254250371|ref|ZP_04943690.1| hypothetical protein BCPG_05263 [Burkholderia cenocepacia PC184]
gi|124879505|gb|EAY66861.1| hypothetical protein BCPG_05263 [Burkholderia cenocepacia PC184]
Length = 299
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 76/292 (26%), Gaps = 1/292 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
S + ++ V + W + + L+ ++ L++ + R + V + +
Sbjct: 7 STSRGARQPLVAAAAVAFTIVSWASAFPFIRIGLQGLAPLQLAAARFATAAVLVIAWLAW 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L D + + + L + A T +
Sbjct: 67 RRPPLPTKADAWRFLACGLLGIALYNALLNTGEQTVSAGAASFIVNTLPIFTALLAAVFL 126
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L L +A + +I L G + A SA F + +
Sbjct: 127 RERFNRWGWLGSLVSLAGIAVIAQGQPGGLVLGSGSTLILGAALCSASYFVLQRRLIPVY 186
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L A+ W + ++ + + +++ +
Sbjct: 187 GALPCTAYTLLAGAVLLAPWLPGALVSLGGGSRDTALAVVVLGVFPAALGYATWTFALGY 246
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y P + + SV + + + + ++V L
Sbjct: 247 FGAARAASFLYLTPAVATLLSVALTGERPGIATACGGVLAIAGVIVVALRGR 298
>gi|296536356|ref|ZP_06898463.1| protein of hypothetical function DUF6 transmembrane [Roseomonas
cervicalis ATCC 49957]
gi|296263332|gb|EFH09850.1| protein of hypothetical function DUF6 transmembrane [Roseomonas
cervicalis ATCC 49957]
Length = 288
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/292 (14%), Positives = 90/292 (30%), Gaps = 12/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
PT+ G A + + + + +V +++ R + V + F+G L
Sbjct: 2 SPTLAGITLQLLAIAFFVAMDTTIKVMTAEFAVSQLLFCRFAVHVVLVALLLRLFTGPLP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + SA L H + S ++V L +++L
Sbjct: 62 WRSRAPGLQALRSLCLASANFLFSHALAQVPLADATAVNFASPL------LTVALAALWL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ER+ + + + +L + + G P + +A +A I
Sbjct: 116 QERVGPRRWLGVAVGLLGVAVALRPPFLTGGPPPHWALLLPLGTAALYAVYQILTRRLAT 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY-GLLNSFVFCIFSYGIKRA 254
+ + + + + + + G L + RA
Sbjct: 176 VDDPRTTILHTGIAAALASAVAQPFVWQWPAAGWGWAGLVALGALGAVGHGFLVLAFARA 235
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
S + M YT + +++S+ + D I I+ + V+ LP
Sbjct: 236 PASLLAPMSYTQLVWAVLASMLVFGDWPDRWTLIGAAIIAVGGVLVALPQRR 287
>gi|170769435|ref|ZP_02903888.1| carboxylate/amino acid/amine transporter [Escherichia albertii
TW07627]
gi|170121759|gb|EDS90690.1| carboxylate/amino acid/amine transporter [Escherichia albertii
TW07627]
Length = 306
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 86/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L ++G+LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLLGSLFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLMAFLLLRGHKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ L +L+ + + + F S G
Sbjct: 63 PPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL-CFSRLFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +++L+ + + + I A+ +
Sbjct: 122 RKLEWLGIAIGLAGIVMLNSGGNLSGNPWGAILILIGSVSWAFGSVYGSRITLPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + + + Y I+ +
Sbjct: 182 AIEMLAAGVALMLASMIAGEKLTAVPSVSGFLAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + + + G++V A+V+ L + K
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAK 293
>gi|126650884|ref|ZP_01723100.1| hypothetical protein BB14905_05218 [Bacillus sp. B14905]
gi|126592549|gb|EAZ86567.1| hypothetical protein BB14905_05218 [Bacillus sp. B14905]
Length = 325
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 99/307 (32%), Gaps = 22/307 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ G + ++ + L S L+ ++HR + IV
Sbjct: 13 SKKTKAYFSATMYALIIGFSFMFVKLSLVASSPLDTLAHRFSIAFVIATVIIVL-----K 67
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + +L + + + F + L+ P+ ++ L S++L
Sbjct: 68 KIRLNVTKMDVWKILPLALVYPTLFFTFQTFGLVYASSSEAGIILATVPIFTLILASIYL 127
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSG--------IPLLSLAIAVTWSAYCFARKTIPVG 191
KE LQ ++ LL + ++ + + +G + + ++ AY V
Sbjct: 128 KEHTVPLQKVSVLLSVSGVIFIFVMNGADTGSQNVKGIFLMLLSALTGAYNTVLARKLVQ 187
Query: 192 SSEGFFIEMCVLAIPALFY--------VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
I + +F+ ++ F + L +
Sbjct: 188 HYSFLTITYVMTFFGFIFFNIVAIGNHMITKTMYQFIEPFSSGTFIIAIIYLGALSSLGT 247
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+Y + + + S + + A L+ I++ V L + I + I+++ ++
Sbjct: 248 SFFSNYALSQIEASKMSVFNNLATLITIIAGVLFLNETIQSYHIFGTIIILLGVLGSNYN 307
Query: 304 TVINSGK 310
S +
Sbjct: 308 AKQKSER 314
>gi|325276413|ref|ZP_08142185.1| transporter DMT superfamily protein [Pseudomonas sp. TJI-51]
gi|324098442|gb|EGB96516.1| transporter DMT superfamily protein [Pseudomonas sp. TJI-51]
Length = 295
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 117/294 (39%), Gaps = 7/294 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS---LL 81
G + A ++ + YT L + E+ R L +LP + +V LL
Sbjct: 3 KGIVSSVVASCMFAVMYFYTSLLRPLDGEEIFGWRTLLTLPCLTLFMVVSKDWKRVGQLL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + ++ ++ ++ V F++A L + S YF+ P+ V G + E
Sbjct: 63 GRVRRTPVLLLGMLGTSWLMGVQLWLFLWAPLHGRSLEVSMGYFLLPLAMVLTGRLVYGE 122
Query: 142 RLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL+ LQ +A L + + H +L + + Y R+ G + +M
Sbjct: 123 RLSRLQAVAVACAALGVGHELYQHGSFAWETLVVVTGYPVYFVLRRRCGTDHLGGLWCDM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
C+L AL++V+ S + + G +++ + + S G
Sbjct: 183 CLLLPWALYFVMQGPLSSADLQAHP--GLYALIPLLGAISACALIAYVLASRLLPFSLFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P+L++ ++ + + I + + + + A++V +L + + + +
Sbjct: 241 LLSYVEPVLLVGVALLLG-ETIGPDQWLTYLPIWAAVLVLVLEGFKHLLRQRRR 293
>gi|323493518|ref|ZP_08098640.1| hypothetical protein VIBR0546_14395 [Vibrio brasiliensis LMG 20546]
gi|323312341|gb|EGA65483.1| hypothetical protein VIBR0546_14395 [Vibrio brasiliensis LMG 20546]
Length = 337
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 86/293 (29%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG + + + + + +R L ++ + + + + +
Sbjct: 41 YLLPLFTVFIWGGNAIVNKMAAETIEPSAMSFYRWLLAIVILTPFCL----PKVIKRWQI 96
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT + + P+I++FL L + ++
Sbjct: 97 IRPNLAKLAFLAMLGMVLNQSLSYYAGLTTTASNMALITSLVPLIAIFLSVPLLGKPISP 156
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
+ I+ +L + L+ M + + Y +
Sbjct: 157 ISIVGGVLALSGLVFMLGKGDATFFLHQEVTPGDGIMVIASVCYAAYCVLLKRWKMPLSN 216
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M + ++ + E L + ++ I
Sbjct: 217 WTMVYMQGALALIMLTPLWLSSEQLLPAKQALPLIAYAGLAASIAAPWMWVKAIDLIGAD 276
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + P++ I + +L + + I + V +++ L + K
Sbjct: 277 SSAMFMNLMPVVAITLAASLLGETVRDYHVIGGLLTVTGVLLSQLKLRGRTSK 329
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 47/167 (28%)
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + L L LS+ I + + L V + + E
Sbjct: 10 YDSQCLFKDIYFYIDLSNLSVSITLPGAAMVYLLPLFTVFIWGGNAIVNKMAAETIEPSA 69
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + + + L + Y S
Sbjct: 70 MSFYRWLLAIVILTPFCLPKVIKRWQIIRPNLAKLAFLAMLGMVLNQSLSYYAGLTTTAS 129
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ PL+ I SV +L +PI + + + + +V L
Sbjct: 130 NMALITSLVPLIAIFLSVPLLGKPISPISIVGGVLALSGLVFMLGKG 176
>gi|291235722|ref|XP_002737793.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 339
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 97/298 (32%), Gaps = 20/298 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G L+ F + I + + +F E + EV R+L L GV +V +
Sbjct: 43 IGLLYGFLSSIFFAAGFVGVKFFENNIHSFEVALARMLIQLMGVAPLLVCKNVTFP---- 98
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ P + LV + +A+ +F PV +VF +FL+E+L
Sbjct: 99 --RKPLQIYWLVCRGVTGSFSVICAYFAVQHIGVGDALAIFFSNPVFTVFFAWMFLREKL 156
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPV 190
+ + ++ A+ + ++++ S I + + A +
Sbjct: 157 SPIDLLLAVFTVSGVVLIVQPSFIFGGNNTHEKHSRIKGAAVALVGAVFAALVYICLKKL 216
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ I + A+ + + D + L G F+
Sbjct: 217 KTGIHLLIPIFYYALCGIIISSVSLSILQAFIVPQCRKDRIILFLIGAFAVVGQLFFTKA 276
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ K + + I+ + + F + + +++ + V + ++
Sbjct: 277 VQLEKAAYIAIIRSLDVVFSFIFEYFAFGRIPNLKVVAGTMLILSSAVCVAVKKMLAK 334
>gi|237709957|ref|ZP_04540438.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229456050|gb|EEO61771.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 302
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 87/285 (30%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG T + T+ L +S ++ +R + ++
Sbjct: 12 LMAIITVAIWGTTFVSTKILIQHGLSPSDIFFYRFTLAYLCMWCISY-------KKLFAN 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L+ +++ AL S +PV++ L +F ++
Sbjct: 65 RIKDELLLLLAGLCGGTIYFITENTALGITLASNVSLIVCTSPVLTTLLSYLFRRKEPFT 124
Query: 146 LQII-AALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
++ +++ ++ + ++ + L + + +
Sbjct: 125 RHLVYGSIMALIGVGLVVFNGSFILKINPLGDILSLTAALMWAFYCLILKQLDNHYSIVF 184
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L ++ + + I L + + F ++ +K
Sbjct: 185 ITRKVFFYGVLTILPMFLFRPLNWDNVLMMQPIVFGNLLFLGFVASMLCFIAWNACVKEL 244
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S I+ + I + +++ + +
Sbjct: 245 GAVKSTNYIYIIPLVTLLTSAVIINEKITWIALTGCFLILCGVYL 289
>gi|205358676|ref|ZP_02658357.2| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205332511|gb|EDZ19275.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
Length = 315
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 103/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ + +S + R+L++ G+ F G
Sbjct: 18 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVTFSFMHGD 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L+FS F+ + + F++P I V ++
Sbjct: 76 KIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R L + A L ++ ++ H L IA ++A + +
Sbjct: 136 RRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTAWPSRLI 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + ++ G HF + F + S F ++ G
Sbjct: 196 AQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGA 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + S+ +L + +++ ++++ L + +
Sbjct: 256 QLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRAR 313
>gi|190891924|ref|YP_001978466.1| transporter protein [Rhizobium etli CIAT 652]
gi|190697203|gb|ACE91288.1| probable transporter protein [Rhizobium etli CIAT 652]
Length = 312
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 19/313 (6%)
Query: 11 SKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGV 67
+ + ++ G + A + I +++ E +S +V +R + +
Sbjct: 6 QESAAMSEPHQNSLQGMAIMSGAMFILPIMDAIAKYMATFEAMSPGQVTFYRFFFQIACT 65
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
++ G + + K M + + F A+ YFV
Sbjct: 66 LPILIALFGFKAF------SAKRPWMNILRGVLHGAASLLFFVAVKYMPLADVFAIYFVE 119
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
P + + +VFL E++ + +A + +I+ S A+ A+ F+
Sbjct: 120 PFMLTAMSAVFLGEKVGWRRWMAIAVGFGGAMIVIQPSYEIFGLKALLPVACAFLFSLYL 179
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFS----------GGEHFFLGNIPDTLFLIGYG 237
+ + + + + V+ + + L+ G
Sbjct: 180 FLNRAIGEADSPLTMQTMAGIGGTVFMAAALLVGSGAGSADFAISLPASGLGLGLLLALG 239
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++ + + + A LS + +Y + V + + I I+V +
Sbjct: 240 SISGYAHMLVVRAFRLAPLSLLAPFQYFEIISATVLGYALFNDFPSFSKWIGIFIIVASG 299
Query: 298 VVYLLPTVINSGK 310
+ + +
Sbjct: 300 LFIIWRERQQDNR 312
>gi|209547661|ref|YP_002279578.1| hypothetical protein Rleg2_0049 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533417|gb|ACI53352.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 304
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 77/277 (27%), Gaps = 5/277 (1%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + + +E + + +I+ R L + + + Y L +T + L
Sbjct: 22 WGSSYTFIKIGVETIPPVTLIAVRTLIAGGILLAVLRYRRIRLPTDGETWRRFVVQACLN 81
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ W ++ F + + + R I I
Sbjct: 82 SVIPFTLIAWAEQSVDAGLAVILNSATPIFTFLLTVLIARHEQVTARKLFGVISGLAGIC 141
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV----LAIPALFYV 211
L + + L L +A+ + C+A I + +G + ++ +
Sbjct: 142 LVIGVEVLGGLGESLLAQLAIILATACYAGAAIFSKNFKGLDPAVPAAGSLISGAVILLP 201
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
V L + F I+ ++ Y + +
Sbjct: 202 VSLVVDRPWTLDPSAASILALLALSAFSTALAFAIYFRLVQTLGSVGTTSQAYLRVPIGV 261
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ L + + I V+ + +P + +
Sbjct: 262 AIGIVFLGERLSPTAWIGLVCVIFGVAAMTIPARVRA 298
>gi|66047525|ref|YP_237366.1| hypothetical protein Psyr_4298 [Pseudomonas syringae pv. syringae
B728a]
gi|63258232|gb|AAY39328.1| Protein of unknown function DUF6 [Pseudomonas syringae pv. syringae
B728a]
Length = 304
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 85/296 (28%), Gaps = 4/296 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F G + K +G L+ + V + T + +
Sbjct: 58 RFRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFAAAAWAFGSVLSKHLPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + Y P + ++ V + I + +++ A+V+ LP S
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRS 293
>gi|15597772|ref|NP_251266.1| hypothetical protein PA2576 [Pseudomonas aeruginosa PAO1]
gi|107102024|ref|ZP_01365942.1| hypothetical protein PaerPA_01003072 [Pseudomonas aeruginosa PACS2]
gi|254241008|ref|ZP_04934330.1| hypothetical protein PA2G_01689 [Pseudomonas aeruginosa 2192]
gi|9948638|gb|AAG05964.1|AE004686_2 hypothetical protein PA2576 [Pseudomonas aeruginosa PAO1]
gi|126194386|gb|EAZ58449.1| hypothetical protein PA2G_01689 [Pseudomonas aeruginosa 2192]
Length = 299
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 92/283 (32%), Gaps = 11/283 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P GTL + A ++ G L VL+V+ R ++ + A L
Sbjct: 4 PIRRGTLEMTSAMLICGTIGWLV-LLSGQPVLDVVFWRCVFGFATLLVACAALG----FL 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +A + + S + +W + + + Y V P + V LG+ FL E
Sbjct: 59 RRGSLGREAFLLALLSGVFIVGNWVLLFASYSRASIAIGTAVYNVQPFMLVGLGAAFLGE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVGSSEG 195
++ ++ L +L + G + +A +A + V +G
Sbjct: 119 KVTARKLGWLGLSFAGMLAIVNAHGDSGAPRGDYLFGILLALAAALLYAFAALIVKRLQG 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + P + ++ + I++
Sbjct: 179 TPPHLIALIQVGTGVLMLAPLANLAELPRDVAPWASLATLGIVHTGLMYVLLYGAIQKLP 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G + + P+ I+ + + + + + +++A
Sbjct: 239 TALTGALSFIYPVAAILVDWLVFEHRLSLAQWLGVAAILLAAA 281
>gi|303256730|ref|ZP_07342744.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
gi|302860221|gb|EFL83298.1| putative membrane protein [Burkholderiales bacterium 1_1_47]
Length = 298
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 84/289 (29%), Gaps = 9/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY-FSGGLS 79
G F A I WG + Q L + S V L +++
Sbjct: 2 QKKTEGICFAISAGICWGSMGVAAQVLMEDSGFAVGDLVAGRLLGAGALLLMFEHFFMRR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L P ++ ++ + F A+ + PV +
Sbjct: 62 SLLKYFSQPGVAKDILLYGVLVLLTQLTFFLAIQCSNAGTAAILAATIPVFTTIWDIFVK 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKTIPVG 191
++ L I++++++T +SL++ A + +
Sbjct: 122 HRAPQIREMACTALAIIAVVLITTKGDFDSVSLSLTGVLWGLASSVAGAASNIQPNAVLK 181
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + + ++ E + + + F ++ +
Sbjct: 182 KIPVTIVVGGGMTVGGIVMSIFFPPWTIEEANWTTLSALFYAYIVVVGTLVSFLLYVSSL 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
K ++ ++ P+ +V SV +L P+ + +V A+ +
Sbjct: 242 KMISATSASLLSCFEPITAVVLSVALLGAPLTPAEGVGGVLVFAAVWLL 290
>gi|299141895|ref|ZP_07035030.1| membrane protein [Prevotella oris C735]
gi|298576746|gb|EFI48617.1| membrane protein [Prevotella oris C735]
Length = 293
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/289 (10%), Positives = 92/289 (31%), Gaps = 6/289 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + + +G PL++ + + ++ +R ++ + ++Y
Sbjct: 1 MQNSKLKGYVEAIISSATFGTIPLFSIPVLAAGMQISSLLVYRFGFACLLMMIILIYNGK 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L L + +L + I V+ ++ + + + + I
Sbjct: 61 SLRLTFGEGLRLSFMALLYAVSAICLVNGYNYLPSGVATTLLFSYPVFTAILEIIFSHHR 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L L+ + +A + ++ ++ S + LL + A +
Sbjct: 121 LTLPIALSIILAVAGVAMLSGIITNGFDVKSSVGLLLELSSGLLYAIYMVAYPNMKIKNM 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFL--GNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + A+ + + L+ + + +K
Sbjct: 181 GSLKTNFFVFLMAMMLLALYSLFTTGYIQPIGNINVFFYLLLLGFIPTTISNVTLVMAMK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++V + PL + + + +P+ +I F ++V A+ + +
Sbjct: 241 NIDSTSVATLGAFEPLTAMAIGILVFGEPMTWCVSIGFVMIVSAVYILI 289
>gi|228952075|ref|ZP_04114170.1| Transporter, EamA [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228807607|gb|EEM54131.1| Transporter, EamA [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 303
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KREWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ +FL
Sbjct: 64 KQELKHSSL----AGLIVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPIFSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ ++ L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIVVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|204928497|ref|ZP_03219696.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|204321930|gb|EDZ07128.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
Length = 315
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 103/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ + +S + R+L++ G+ F G
Sbjct: 18 STRKGMLNVLIAAVLWGSSGVCGQYIMEQSRMSSQFLTMIRLLFA--GLILVTFSFMHGD 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L+FS F+ + + F++P I V ++
Sbjct: 76 KIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R L + A L ++ ++ H L IA ++A + +
Sbjct: 136 RRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLI 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + ++ G HF + F + S F ++ G
Sbjct: 196 AQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGA 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + S+ +L + +++ ++++ L + +
Sbjct: 256 QLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRAR 313
>gi|90418433|ref|ZP_01226345.1| possible integral membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90338105|gb|EAS51756.1| possible integral membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 285
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 81/285 (28%), Gaps = 8/285 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G L A ++ + L + VL+VI R + + + +G L
Sbjct: 8 LTGILLTVLAGSVFAGMDSLGKHLTTLLPVLQVIWGRYFFQTLVLGSYLGATTGTRFLKA 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + +L AL + F TP++ L + LKE
Sbjct: 68 RHP------YLQLVRGMLLLAATICMYNALARVPLADATAVLFFTPIVVTILSVMVLKET 121
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +I A + +L++ + ++ A + G
Sbjct: 122 IGIHRIGAIIAGFCGMLLILRPGFAGIEPALGFALAASGFNACYLLMTRRLAGTEDAAST 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
V + L+ G+ S A S +
Sbjct: 182 QFNTTAAGAVILTLVIIPFWETPAPATLALLVLSGVAGSIGHFTLVTAFSHAPASLLSPF 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y+ L+ + SV + P+ + +++A +Y+
Sbjct: 242 LYSQVLVASILSVVLFGDPLQPPMILGTV-ILVASGLYIWWRENR 285
>gi|229167237|ref|ZP_04294978.1| Transporter, Drug/metabolite exporter [Bacillus cereus AH621]
gi|228616275|gb|EEK73359.1| Transporter, Drug/metabolite exporter [Bacillus cereus AH621]
Length = 296
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 95/289 (32%), Gaps = 10/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ +F + ++ + + +R+L++ + +++ + S
Sbjct: 2 KSPILSYFILFFGVFALSTSAIFVK-IADAPAAITAFYRLLFATVILLPFLIFNTNNRSE 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ K G+L S LA H+ + +L ++ + P+ S+ G K
Sbjct: 61 LRSLSKKQWGFGLL--SGLFLAAHYVLWFESLQYTSVASSTVIVTLQPLFSMVGGYFLFK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
ER II L+ I +++ + IA F
Sbjct: 119 ERFTKGAIIGCLIAISGSIVIGWQDFQISGEALYGDILAFIAAGVITAYFFISQYVRKDL 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ +LF ++ F F+ + IF++ +K
Sbjct: 179 SLIPYSVISYGSSSLFLGIFAYTQQSSFFNYTAQTWWSFIGLAFIATILGQTIFNWLLKW 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + + + + FIL + I + + ++ I + ++LL
Sbjct: 239 MSATVISMSILGETIGTCILAYFILDETISLQQGLGILLIFIGLALFLL 287
>gi|150018262|ref|YP_001310516.1| hypothetical protein Cbei_3435 [Clostridium beijerinckii NCIMB
8052]
gi|149904727|gb|ABR35560.1| protein of unknown function DUF6, transmembrane [Clostridium
beijerinckii NCIMB 8052]
Length = 307
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 92/306 (30%), Gaps = 20/306 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ G L ++WG T + T+ L+ + +E++ R + + Y
Sbjct: 2 SNKKVKAGHLSAVMTILIWGTTFISTKVLLKDFTPIEILIFRFIIGYLTLLCICPYHIKK 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + + + +++ AL + P + ++
Sbjct: 62 -------AKLKQELYFAAAGLAGVTLYFLCENVALSYTLATNVGVLISIAPFFTAVFANL 114
Query: 138 F-LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----------IAVTWSAYCFAR 185
F E+L I + I+ +L++ + L + +S
Sbjct: 115 FLDNEKLTSCFFIGLTIAIIGILLIEFNGKFVLKLNPFGDILAILAAILWAVYSVVMKKI 174
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ I + + F + F L ++ F
Sbjct: 175 SQFQYNTIICTRKVFFYGLIFMIPAIFICDFKLQLYRFTNVSNLMNILYLGFGASALCFV 234
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+++ +K + I Y P++ SS IL + I + I + ++ + + +
Sbjct: 235 TWNWSVKILGVVKTSIYIYMVPVITAASSAVILHEKITFISIIGIILTLLGLFISDGKQI 294
Query: 306 INSGKN 311
I +
Sbjct: 295 IRFRRK 300
>gi|89893831|ref|YP_517318.1| hypothetical protein DSY1085 [Desulfitobacterium hafniense Y51]
gi|89333279|dbj|BAE82874.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 327
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/310 (12%), Positives = 95/310 (30%), Gaps = 22/310 (7%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M L + G++ ++ + L + L+ ++HR + I++
Sbjct: 19 EKRMAYLAAIVYAFIIGLSFMFVKLTLTVATPLDTLAHRFTVAFLAATLFILFTKH---- 74
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + + + + +GF I+ L P+ ++ L LK
Sbjct: 75 -KVNIGWHDVAQIAPLATLYPILFFGFQIFGLARTTSSEAGIIQSTVPIFTLLLAVFILK 133
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E+ Q+I+ L + ++ + SG + I + A +
Sbjct: 134 EKAGRGQLISVFLSVFGVIYLLAMSGAESQTANIVGSVLIILSAFTNALYNVLARRLTQR 193
Query: 201 CVLAIPALFYVVWNGFSG----------------GEHFFLGNIPDTLFLIGYGLLNSFVF 244
L ++ + L L L +
Sbjct: 194 YSLLTLTYIMTLFGFIAFNSLAIGSRMLAGTVGEFFQPLLHWQFVVAVLYLGILSSLVTS 253
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ + + + + + + A L+ I++ + L++ I +++ +V L
Sbjct: 254 FLANFVLSKIEAAKMSVFSNVATLITILAGILFLQEAFHFYHVIGGMMIITGVVGTNLLG 313
Query: 305 VINSGKNKTK 314
+ K K K
Sbjct: 314 ARSKAKEKAK 323
>gi|194433258|ref|ZP_03065539.1| putative transporter [Shigella dysenteriae 1012]
gi|194418542|gb|EDX34630.1| putative transporter [Shigella dysenteriae 1012]
gi|332085294|gb|EGI90468.1| hypothetical protein SD15574_4453 [Shigella dysenteriae 155-74]
Length = 301
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 90/296 (30%), Gaps = 17/296 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYF 74
A + + ++W + ++ + + + + + R ++ +F ++
Sbjct: 1 MSAAGKSNPLAISCLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLR 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G ++ L + G +AL++ + + P V
Sbjct: 61 GRG-------MRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIF 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFAR 185
+VFL ERL Q A L+ L ++ + S+ A SA R
Sbjct: 114 AAVFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKR 173
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + AL V L + +
Sbjct: 174 LYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTAFWALAYSAILATALAWS 233
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ + +K S + P+ ++ S ++L + V ++V+A+ +
Sbjct: 234 LWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|332703811|ref|ZP_08423899.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
gi|332553960|gb|EGJ51004.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
Length = 306
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 78/276 (28%), Gaps = 3/276 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A + I +T+ + +EV+ R + L + G+ +
Sbjct: 14 GIRCMIIAAFWFSIGSAFTKLAGARLPFMEVVWVRAAFGLVFTL--WLLHRAGIRSQGNR 71
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
A G+ FSA ++ + + F + + + L
Sbjct: 72 RGLLLARGLFGFSAMAMSFYGYMRLPLGEATVLFFLNPVFVAVLAALFLGERLNRDSVLC 131
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L + L+I + H + +A A+ I V + +
Sbjct: 132 VLAGLGGALLIAKPPFLFGHGQALDVLGTLAALGGAFMAGCTYILVRKLGATEQPLTQVL 191
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +G + + + L L+G GL + G Y
Sbjct: 192 YLSGVAFCCSGVPAAATWIWPSGREWLLLLGIGLATQAAQVFMTKGYSLEPAGRASAATY 251
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
L V S I D + ++V A +V
Sbjct: 252 FQIPLAAVWSGLIFGDLPDVWSMLGTLLIVAATMVL 287
>gi|260433937|ref|ZP_05787908.1| transmembrane drug/metabolite transporter family protein
[Silicibacter lacuscaerulensis ITI-1157]
gi|260417765|gb|EEX11024.1| transmembrane drug/metabolite transporter family protein
[Silicibacter lacuscaerulensis ITI-1157]
Length = 313
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 80/283 (28%), Gaps = 14/283 (4%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L + L+ V V+ + HRV W+ ++ I+ G +G
Sbjct: 34 GFIWGASFLSIRIALDTVPVMTTVFHRVFWAAAVLWIVIIAQRQGFPTSPKVWCAFFVMG 93
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+L + WG + + F ++ ERL ++I +
Sbjct: 94 LLNNVLPFSLMAWGQLHVETGLTSILNAATAVFGVLAAALMF----PDERLTPTRLIGVV 149
Query: 153 LIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L + + + L++ A I + +L
Sbjct: 150 LGFAGVTVAIGPGNLLRLDLQSMGQLAILAGTVSYAGAAVWARIYLSDLPPQVSAAGMLT 209
Query: 205 IPALFYVVWNGFSGGEHF-FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+ + G + + + + ++ + A + ++
Sbjct: 210 GSAVIMAPIMLWVDGPPSLDISPEAWLAIGYYSAIATACAYLLYYRVLASAGSGNLLLVT 269
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P + I + + + F I+ +++
Sbjct: 270 LIIPPVAITLGALVRNEALPPNAYAGFAILATGLLILSRSGRR 312
>gi|225075054|ref|ZP_03718253.1| hypothetical protein NEIFLAOT_00053 [Neisseria flavescens
NRL30031/H210]
gi|224953538|gb|EEG34747.1| hypothetical protein NEIFLAOT_00053 [Neisseria flavescens
NRL30031/H210]
Length = 296
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 85/284 (29%), Gaps = 14/284 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G+ + A + + + L + S E++ R+L S + +
Sbjct: 9 LGSAWAVIAALSFTVMNLSVKAASTHFGFSSGELVFWRMLVSTLFLGIMA--------KV 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + + I + +Y+++ + + + LKE
Sbjct: 61 QGNTFSTPHWKTHLNRSVIGTLAMMCTLYSVIHLPLATGVTLNYTSSIWLAIFSFFILKE 120
Query: 142 RLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
R+ ++ + ++++ G +L + +A + S G
Sbjct: 121 RITLYTQAILVMGFIGVILLLNPSFQGGQEFAALVSLAGGAMSGWAYLQVRELSLLGEPG 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V + ++ +S + + +L G G+ + K K T
Sbjct: 181 WRVVFYLSLTGLIMSAIWSCFTGWHPLTVSSLPYLAGIGISAMIAQLAMTRAYKVGKKFT 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
V + Y + +S V + I I+V V
Sbjct: 241 VASLSYLTVVFSALSGVLLFGDKITWQEAAGMVIIVAGGVFSSF 284
>gi|193078621|gb|ABO13659.2| putative permease [Acinetobacter baumannii ATCC 17978]
Length = 295
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 84/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLL----KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + I ++ + I + + ++F
Sbjct: 62 KIAYISSTPSKLSVFTQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G + LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 122 GRLILKESIYINSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLVNLHAIHFNIDIVLGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + V
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFVM 288
>gi|254303863|ref|ZP_04971221.1| possible DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148324055|gb|EDK89305.1| possible DMT superfamily drug/metabolite transporter [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 356
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 83/282 (29%), Gaps = 4/282 (1%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A ++ I ++ L + V + + G+ +
Sbjct: 11 LFALLAASIYSINIPLSKLLLKHVGTTMMAGFLYFGAGIGLIVLTNIMKFVGISKEQEPL 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + ++ + S V + + V KE ++
Sbjct: 71 TKRELPYTIAMVILDIIAPILLMFGISMTNSANVSLLNNFEIVATSIIALVIFKEIISKK 130
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
IA L+ ++ +I++ + + + S S IE+ +
Sbjct: 131 LWIAIFLVTIASIILSFEGKGAFVFNKGSLLVLAASTCWGFENNCTKMLSNKDPIEIVTI 190
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
F I ++ + C++ K +
Sbjct: 191 KGCFSGLGSIIIALIIGEKFPDLIWLFTVMLLGFIAYGLSICLYIIAQKHLGAAKTSAYY 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
AP L + S+ +L + I F I++IA ++ + T+
Sbjct: 251 SVAPFLGVAFSMLLLHEKPTLQFYIAFLIMIIATIIMVKDTI 292
Score = 40.7 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 6/138 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G+L V A WG T+ L +E+++ + +S G + L
Sbjct: 157 KGSLLVLAASTCWGFENNCTKMLSNKDPIEIVTIKGCFSGLGSIIIALIIGEKFPDL--- 213
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+++ + +I A TS Y V P + V + L E+
Sbjct: 214 ---IWLFTVMLLGFIAYGLSICLYIIAQKHLGAAKTSAYYSVAPFLGVAFSMLLLHEKPT 270
Query: 145 HLQIIAALLIILSLLIMT 162
IA L++I++ +IM
Sbjct: 271 LQFYIAFLIMIIATIIMV 288
>gi|89902006|ref|YP_524477.1| hypothetical protein Rfer_3237 [Rhodoferax ferrireducens T118]
gi|89346743|gb|ABD70946.1| protein of unknown function DUF6, transmembrane [Rhodoferax
ferrireducens T118]
Length = 300
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 84/291 (28%), Gaps = 8/291 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A + + I T++ + V VL ++ R + F + K
Sbjct: 11 GIALIVLATLAFAILDTVTKYAVTLVPVLMLLWFRYAFQALLTFVL------RFPVQKRR 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L +L + + L + ++P+++ + + LK+ ++
Sbjct: 65 LFRTPNPRFQTLRGVLLLITSACSFFGLRYLPVGEFTAMVMLSPLVATAMAAWVLKDHVS 124
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF-IEMCVL 203
H + + ++ +L++ G + + + G
Sbjct: 125 HQRWLLMAAGLVGVLLVVRPGGQVFSWALLFPVLLVTTYGWFQVLTSRLSGEENPYTTHF 184
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ VV + + + + G +F + RA +
Sbjct: 185 YTGLVGAVVMSPIVVFNWSTTALLTYWPWFLLVGFSGTFGHLMLIRAYTRASAPVLTPYL 244
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
YT V+ K D + + ++ + V L + K +
Sbjct: 245 YTQIAFATVAGWLAFKHVPDALAWLGIAVIAASGVGNALLSAHEVTKLRRA 295
>gi|60680278|ref|YP_210422.1| putative transmembrane permease [Bacteroides fragilis NCTC 9343]
gi|60491712|emb|CAH06466.1| putative transmembrane permease [Bacteroides fragilis NCTC 9343]
Length = 302
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 82/286 (28%), Gaps = 6/286 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G F A ++WG+ + L + S L V + R++ + + +
Sbjct: 5 KNLKGHALAFTANMMWGLMSPIGKSALAEFSALSVTTFRMVGAAAAFWILSAFCKQEQVG 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+D +K A + + + + TS + V K
Sbjct: 65 HRDMVKIFFASLFALVFNQGIFIFGLSLTSPIDASIVTTTSPIITMIVAAIYLKEPVTNK 124
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L LI++ G + + + T+ G S+ +
Sbjct: 125 KVLGIFIGAMGALILILSSQAVSAGGGSIWGDLLCMIAQLSFSIYLTVFKGLSQRYSAIT 184
Query: 201 CVLAIPALFYVVWNGFSGGE-----HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + FS + + L + + K +
Sbjct: 185 INKWMFIYASICYIPFSYQDIASIKWDSISTAAIYQVLYVVLCGSFIAYICIMTAQKLMR 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V + Y P++ ++++ + + + +V + +
Sbjct: 245 PTVVSMYNYVQPIVASIAAILMGIGSFGWEKGVAIALVFLGVYFVT 290
>gi|326794223|ref|YP_004312043.1| hypothetical protein Marme_0932 [Marinomonas mediterranea MMB-1]
gi|326544987|gb|ADZ90207.1| protein of unknown function DUF6 transmembrane [Marinomonas
mediterranea MMB-1]
Length = 303
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 93/303 (30%), Gaps = 5/303 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
++K + ++ L A W ++++ L ++ IS R + + +
Sbjct: 1 MTKGASLKAELILVLVTILAAFGW----IFSKESLHELPPFFFISTRFILAGFILTLVAP 56
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G++ + + M + + + L + +
Sbjct: 57 KSVLGMTRIDWKHASFVGGLMGLAMMFWITGLDQIQNIGVGAFISSLGVVFVPLVARLIF 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
S + +I + L + + L +A + A F + S
Sbjct: 117 KDSSSRSIWFALPIAVIGLGCLSLGSVQSAIGFEFAQLYFLVAACFLALQFTFLSKLTAS 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
F + L + +V + + + F + + F + +Y +
Sbjct: 177 INSFGLTAVQLMATGVMILVVSLLTEEVPATVSLSTLGWFFSSVFIATTLRFLLQTYAMS 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A S I+ P+ V +VF + + + + + V IAM+V V + +
Sbjct: 237 LASASHAAIIMNLEPVWTAVFAVFWYSERMTSWQLLGCTFVFIAMLVAKWSAVKSFIRKN 296
Query: 313 TKK 315
+K
Sbjct: 297 ERK 299
>gi|300975902|ref|ZP_07173209.1| integral membrane protein DUF6 [Escherichia coli MS 45-1]
gi|300410168|gb|EFJ93706.1| integral membrane protein DUF6 [Escherichia coli MS 45-1]
gi|315289685|gb|EFU49078.1| integral membrane protein DUF6 [Escherichia coli MS 110-3]
gi|315292670|gb|EFU52022.1| integral membrane protein DUF6 [Escherichia coli MS 153-1]
gi|315298481|gb|EFU57736.1| integral membrane protein DUF6 [Escherichia coli MS 16-3]
Length = 326
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 44 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 96
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 97 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 156
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 157 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 216
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 217 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 276
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 277 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 314
>gi|299134304|ref|ZP_07027497.1| protein of unknown function DUF6 transmembrane [Afipia sp. 1NLS2]
gi|298591051|gb|EFI51253.1| protein of unknown function DUF6 transmembrane [Afipia sp. 1NLS2]
Length = 306
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/285 (10%), Positives = 81/285 (28%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + ++ + + + R W L + +SG ++
Sbjct: 18 YLLLCLTMLFWAGNIVIGRYAAGQIPPMALSYLR--WQLAFLSLLPFAWSGLVADWPTIR 75
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+N + +L F+ +A ++L P+ V RL
Sbjct: 76 RNLGMMILLAFTG--VATFNTLGYWSLQYTTALNALLLQSSGPLYVALFALVLFNVRLTW 133
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+Q ++ + +L + L + + Y
Sbjct: 134 MQAFGIVISLTGVLTIILQGQLSTLLQIHFNKGDIGYTVALFVFGLYSALASRRLALKQL 193
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F C + + + + G L + ++ + ++ GI+
Sbjct: 194 SFLAFNCGVGSLFILPLFLWEMASGRVTPLNAHTIPILAYVAIFPSTLAYLFYNRGIELI 253
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ ++ +L + + + +V +V+
Sbjct: 254 GANRSAPFLHLIPVFGSAMAIGLLGEEPHLYHIVGYALVFAGVVI 298
Score = 36.4 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 7/136 (5%), Positives = 42/136 (30%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+ + + A G + + L + + + +
Sbjct: 22 CLTMLFWAGNIVIGRYAAGQIPPMALSYLRWQLAFLSLLPFAWSGLVADWPTIRRNLGMM 81
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
++ + + + ++ +++ + PL + + ++ + + ++ I
Sbjct: 82 ILLAFTGVATFNTLGYWSLQYTTALNALLLQSSGPLYVALFALVLFNVRLTWMQAFGIVI 141
Query: 293 VVIAMVVYLLPTVINS 308
+ ++ +L +++
Sbjct: 142 SLTGVLTIILQGQLST 157
>gi|284924045|emb|CBG37144.1| putative membrane protein [Escherichia coli 042]
Length = 312
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 86/278 (30%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSALLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL L + + ++ + +K S +
Sbjct: 203 LYAALVMSAVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 300
>gi|239940165|ref|ZP_04692102.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
gi|291443595|ref|ZP_06582985.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291346542|gb|EFE73446.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 319
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/290 (10%), Positives = 76/290 (26%), Gaps = 14/290 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSG 76
+ +LW + + + S + R+L + ++
Sbjct: 4 TTTTHPWRAPAAACTTVVLWASAFVSIRSAGEAYSPGALALGRLLAGTLVLGAILIVRRE 63
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
GL ++ ++ + + + P++ G+
Sbjct: 64 GLPGRGAWPG------IITSGVLWFGLYMVALNWGEQEVDAGTAAMLVNIGPILIALFGA 117
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR-------KTIP 189
L E L ++ + +++ L S + V +
Sbjct: 118 RMLGEGLPRRLLLGMGVSFAGAVVVGLAMSGHGGSSVLGVALCLLAAVAYAAGVVSQKPA 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ I I A+ + + G E + + F + Y
Sbjct: 178 LAHGSSLQINTFGCLIGAVACLPFTGVLVSEAADAPLSATLNMVYLGVFPTALAFTTWGY 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ R +G Y P L++ + +L + + + + + + V
Sbjct: 238 ALARTTAGKMGATTYAVPALVVGMAWVLLDEVPTPLGIVGGVLCLAGVAV 287
Score = 38.4 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 25/79 (31%)
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
G + L ++G + T ++ P+L+ + +L + +
Sbjct: 66 PGRGAWPGIITSGVLWFGLYMVALNWGEQEVDAGTAAMLVNIGPILIALFGARMLGEGLP 125
Query: 284 TVRTIVFGIVVIAMVVYLL 302
+ G+ VV L
Sbjct: 126 RRLLLGMGVSFAGAVVVGL 144
>gi|229085786|ref|ZP_04218014.1| Transporter, EamA [Bacillus cereus Rock3-44]
gi|228697585|gb|EEL50342.1| Transporter, EamA [Bacillus cereus Rock3-44]
Length = 309
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 94/300 (31%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITYFMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L A++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LLAVGIVGTALYQTLFMLSVKYTSATNASLLIAMSPIFTGILAVMH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +LL ++ L + A +
Sbjct: 121 KQERFSMKIQIGSLLSFSGAALVLLTGHTNQSTYEHAWLGNVIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN-IPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPADVLSWGSLGYSIVFATVFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + F + + ++ ++ ++ I + V V
Sbjct: 241 YVGISKLGSTKVMVYMYLVPLFAVIFAAFTIGEKMNMMQLTGGFVIFIGLYVVKKGAVKK 300
>gi|255599176|ref|XP_002537169.1| conserved hypothetical protein [Ricinus communis]
gi|223517250|gb|EEF25215.1| conserved hypothetical protein [Ricinus communis]
Length = 283
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 86/283 (30%), Gaps = 2/283 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS-LLK 82
+G+ ++ A + + I + + + + E++ +R + + + + L L
Sbjct: 1 LGSYWMLLAGLGFAIMGAFVKAGAARFTTSELVFYRSAFGFLMIAALVCWQGKPLKTPLL 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
VG A+ A+ + ++ + +
Sbjct: 61 AMQMRRAGVGFTALLLFFYAIAHLPLATAITLNYTSPMFLALLSPWLLRGEHPLSHQQRQ 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +L ++ + + LL HS L ++ FA + G V
Sbjct: 121 ILNLCVVGGFVGVCLLLQPAFHSNQLLAGGIGLLSGIGAAFAYVHVKQLGIAGEPDWRTV 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + G+ +H D L G G+ + + + TV +
Sbjct: 181 FYFTLVCTIASGGWMLIDHVTTLQWQDLPLLCGLGVSATLSQLALTRAYRTGNTLTVASL 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y+ + + V + + + I ++V ++ +
Sbjct: 241 AYSTVVFATLIGVLVWDETLSAHEIIGMLLIVAFGILSSRSSR 283
>gi|218231684|ref|YP_002367765.1| transporter, EamA family [Bacillus cereus B4264]
gi|218159641|gb|ACK59633.1| transporter, EamA family [Bacillus cereus B4264]
Length = 303
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/308 (11%), Positives = 93/308 (30%), Gaps = 17/308 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIP 189
+ER + I +++ + + L + A +
Sbjct: 116 QERFSMKVQIGSIVAFVGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I + VV+ F+ + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVVYCLFNINTLTWPVDMPSWGSLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIQKQ 295
Query: 309 GKNKTKKS 316
N K S
Sbjct: 296 ALNLKKVS 303
>gi|148274020|ref|YP_001223581.1| permease DMT family [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|147831950|emb|CAN02921.1| putative permease, DMT family [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 325
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 88/296 (29%), Gaps = 20/296 (6%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG + L + + V ++ R L + V L + L
Sbjct: 13 LLLLAVAAVWGASFLAAKDLAAETGVPAAVAVRFLVAAGATGLVCVARRERLPRGRGLL- 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ A G + + + V++ L + L
Sbjct: 72 ------IAAALGCSQAAVIGLETWGVHLTSATNAGLLISLALVMTPVLEGAASRSWLPRS 125
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+AA+ ++ + ++ G L+ A V + + S +
Sbjct: 126 YFVAAVAAVVGVALLVSEGGLRAPTPGDGLVIAAAVVRAVHVTASARLTRGRSEGSLGVV 185
Query: 200 MCVLAIPALFY-VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +A+ A + + L L L + F F + + ++R S
Sbjct: 186 LVQMAVCAALFSAMAEPDLPAAAAALDAPGWAGVLFLGVLCSLFAFAVQLWAVRRTSASR 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
I+ T P+ ++ V + + I V ++V A +++ +
Sbjct: 246 ASILMGTEPVWALLVGVVVAGEAIGPVGAGGAALIVAA----SYAGQAIERRHRAR 297
>gi|121592806|ref|YP_984702.1| hypothetical protein Ajs_0373 [Acidovorax sp. JS42]
gi|120604886|gb|ABM40626.1| protein of unknown function DUF6, transmembrane [Acidovorax sp.
JS42]
Length = 295
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/293 (10%), Positives = 82/293 (27%), Gaps = 8/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGG 77
+ + G A + + T+ + + L + R ++ ++ SG
Sbjct: 9 SPRTALAGIALTVGACASFALLDTATKLVSATTPLLLALWLRYVFQSLVTSAYVLPRSGW 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
D + A + A F I+++ + TP+ + ++
Sbjct: 69 RPPRTDHPRYQLLR------AVLFAATSLFGIFSIRAMPLAEFTAIVAATPLCVTLVAAL 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L++ ++ L+ + + S+L++ G + + C I G
Sbjct: 123 WLRQPVSPLRWLLVATGLASVLLILRPGGQSFSGVLVLPLGMLACGTGYQILSSRMAGQE 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLNSFVFCIFSYGIKRAKL 256
+ + + + L ++ + A
Sbjct: 183 APTTTQFYTSWIAAGLMTLAVPFVWTAITSAWVWLGLVVMGLSSALGHLLLLRAYACAAP 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+T+ YT +++ + D + ++ + TV
Sbjct: 243 ATIAPFLYTQIAFAMLAGWAVYGHMPDRWSLLGICLIAASGAASAWLTVRERR 295
>gi|15673460|ref|NP_267634.1| hypothetical protein L106608 [Lactococcus lactis subsp. lactis
Il1403]
gi|12724472|gb|AAK05576.1|AE006378_5 hypothetical protein L106608 [Lactococcus lactis subsp. lactis
Il1403]
gi|326406948|gb|ADZ64019.1| drug/metabolite exporter family transporter [Lactococcus lactis
subsp. lactis CV56]
Length = 295
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/297 (9%), Positives = 90/297 (30%), Gaps = 12/297 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G ++ +GI+ + L + +++ R+L+S + +
Sbjct: 1 MTKFKGIIYASLGAAFFGISSIIAGLLFNRCSIEPGWLVTTRMLFSGLLLLAWLAITKHN 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + ++K+ + + F+ ++ + + + P I + + ++
Sbjct: 61 IFSVWSSVKSSLRIVAFGIFG--VLFAQSSFLLSVYYGNAAIATILQSLGPSIIIIILAI 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPV 190
K L IIA L ++ + ++ + L + + P+
Sbjct: 119 KSKAIPRRLDIIAIFLSLIGVFLLVTNGNIGELSFSASALVWGLLSALGVCAYTLIPCPL 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + L + + + ++
Sbjct: 179 IKEHPPLSLVAWALLIGGVISNFLHPVTNLPKNFDQTDLLLVSLIVVVGTLLAYSLYINS 238
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+K + VG++ P+ I+ S L + + +V +++ + P
Sbjct: 239 LKYTEPHIVGMLGMLEPVTAILISTLFLGVSFLGFQQLGIFVVFLSLFLINFPAKKK 295
>gi|313146421|ref|ZP_07808614.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313135188|gb|EFR52548.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 299
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 94/284 (33%), Gaps = 18/284 (6%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ ++WG T + T+ L +S ++++ +R L + I +FS + K
Sbjct: 13 VMAAVTVMIWGTTFVSTKVLIKYGLSPVDILFYRFLLAYIC----IWFFSPRVLRAKSWQ 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ VG+ + ++ V + L L + V + + ++L
Sbjct: 69 DELRFVGLGLCGGSLYFVAENTALGMTLASNVSLIICTTPVLTALLAPF--FYKGDKLKA 126
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
+ +L+ ++ + ++ + L + + R +
Sbjct: 127 RLVGGSLIALIGVGLVVFNGSFILQLSPVGDILTLAAALMWAFYCLLLRRMNTHYPTLFI 186
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L + H + L + + + +++ +K+
Sbjct: 187 TRKVFFYGLLTLLPLFFVSPLQMDTHILFQPVVVLNLLFLGVIASMLCYIMWNTAVKQLG 246
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y PL+ +++S ++ + I V + +++ + +
Sbjct: 247 VVCTTSYIYVVPLITLLTSAIVIDETITIVALLGSALILSGVYI 290
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 39/138 (28%), Gaps = 1/138 (0%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
+ AVT + + V G + L Y+ FS
Sbjct: 9 GWYHVMAAVTVMIWGTTFVSTKVLIKYGLSPVDILFYRFLLAYICIWFFSPRVLRAKSWQ 68
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVR 286
+ F+ S F + + S V ++ T P+L + + F +
Sbjct: 69 DELRFVGLGLCGGSLYFVAENTALGMTLASNVSLIICTTPVLTALLAPFFYKGDKLKARL 128
Query: 287 TIVFGIVVIAMVVYLLPT 304
I +I + + +
Sbjct: 129 VGGSLIALIGVGLVVFNG 146
>gi|261364666|ref|ZP_05977549.1| membrane protein, drug/metabolite transporter family [Neisseria
mucosa ATCC 25996]
gi|288567276|gb|EFC88836.1| membrane protein, drug/metabolite transporter family [Neisseria
mucosa ATCC 25996]
Length = 286
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 79/278 (28%), Gaps = 16/278 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ++WG T L T FL RVL + + +
Sbjct: 8 ILTTALAPLIWGSTYLVTTEFLPPDRPFTAALFRVLPAGLLLLA----------WTRRIP 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + +++ + A G L + ++ + + K
Sbjct: 58 KRDEWATVVLLGFLNIGFFQAMLFVAAYRLPGGLAAVLSSTQTLMVLVFTWLIGKTMPPK 117
Query: 146 LQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ +L + ++ L G +L+ A S
Sbjct: 118 AAWTWSAAGVLGIALLVLSPQARYDGTGILAALTGAAAMALGVYLSKHRRTSLPVLAFTG 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L I LF + + L +L + +F GI + + V
Sbjct: 178 WQLFIGGLFLLPVALLAEPRLESLSPANIGGYLYLCLFGAVLAYVLFFKGIAKLSPAAVS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +P+ V L Q +D + F +V++++
Sbjct: 238 SLGLLSPVSAFVLGWLFLGQGMDAKSLLGFTLVLVSIF 275
>gi|224418350|ref|ZP_03656356.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
gi|313141881|ref|ZP_07804074.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130912|gb|EFR48529.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 295
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 81/288 (28%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++ ++ + A WG + + L + S V R ++L I+ +
Sbjct: 2 QKNLIFSILIVIAMAFWGSSWACGKILVQYASADIVAFWRFFFALVASIPLIILLKVPMR 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + K + + + G + +T+ +++ F
Sbjct: 62 INTENFK-FLLIAACLNGIYSILFFMGLNYGSAGKGGVLVTTLIPIFAYLLAYFFSHKEN 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
K + + + II + ++ L G + A
Sbjct: 121 KSIKANEILGLGIGIISGICLLDLGSFQELFGKFNTFFLLCALNWAILTLVCQKIRIHPL 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L++ + E F + + L + I+ GI +
Sbjct: 181 AINFYITFLSLLFYSPLFLFKPQIIEVFHYDMQFWVMIFVVAVLSTAIGTSIYYMGIAKL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + P + + SS IL + + + + A + +
Sbjct: 241 GATKASSYQLLVPAMALGSSYLILGEIPSLLTIFGGILAIFATYLINI 288
>gi|307155294|ref|YP_003890678.1| hypothetical protein Cyan7822_5530 [Cyanothece sp. PCC 7822]
gi|306985522|gb|ADN17403.1| protein of unknown function DUF6 transmembrane [Cyanothece sp. PCC
7822]
Length = 328
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/300 (11%), Positives = 86/300 (28%), Gaps = 20/300 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T + L + A + + ++ + E ++S +R + + G
Sbjct: 14 RNQTSIAILSLCIAVVCISVAAIFIKLCEQEISPYATAFNRFWVTTVILGLWRGVNGGRT 73
Query: 79 SLLKDTLKNPKAVGMLVFS------------ATILAVHWGFFIYALLTRQGFLTSFSYFV 126
L DT + + + S LA + ++L + +
Sbjct: 74 QDLSDTAEEISEMALETCSISGAVLWQLVLVGIFLAADLLLWSWSLTQTSVANATLLANL 133
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-------AIAVTWS 179
TP+ + ++ + +I ++ +L + + + S +A
Sbjct: 134 TPLFTSLGMWGIWGKQFDRKFVIGMIVALLGAIALGVGDLNVHPSKLTGDVAAILAALSF 193
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
A I AI ++ + + F+ F + +
Sbjct: 194 AGYLFVLEKLQLRLPALTITRWSSAIASVALLPFVIFNHEHIFPTSWQGWLAVIGLALIC 253
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ R V I P+L + + + + + + F +V++ + +
Sbjct: 254 QILGQVCLVQSLNRLSCGFVAIFLLLEPILAAFEAWVVFSETLSILNWLAFAVVLLGIYL 313
>gi|156394369|ref|XP_001636798.1| predicted protein [Nematostella vectensis]
gi|156223905|gb|EDO44735.1| predicted protein [Nematostella vectensis]
Length = 308
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/304 (11%), Positives = 92/304 (30%), Gaps = 23/304 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S+ ++G L + + + I+ L+ + L ++ EV+ R L L + ++Y
Sbjct: 11 SSVSKILGLLLAASSCVFFAISSLFVKLLGEIPPQEVVFFRSLVQLIFLLPPVIY----- 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + L+ + YA + F +P+ + LG
Sbjct: 66 -SQSPALGERRQLPCLIVRGLAGTLALCCQFYAFQRIPLADATVIVFSSPIFTGILGYFI 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-----------------LAIAVTWSAY 181
L+E +A +L ++++ + + +A+
Sbjct: 125 LREAWGWFDAVATMLCFFGIILIVRPTFLFGREAGGLSSSDNWQQLTASLVALCGAVMTS 184
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ + + + + +G L+ GL
Sbjct: 185 IALIAIRKLQGVHCLTPVLYLAISGVVSTAIGVLVTGTFRSVRCGSNHQWLLLALGLCGI 244
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + ++ + V ++ + + + L + I +VV V+ +
Sbjct: 245 GGQTLLTKALQLERAGMVALVRTLDIVFAFLLQLAFLDYRANVYSVIGAVMVVACNVIVI 304
Query: 302 LPTV 305
T
Sbjct: 305 ASTW 308
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 28/66 (42%)
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
C Y +R L+ ++ +++P+ + FIL++ + + +++ + P
Sbjct: 91 LCCQFYAFQRIPLADATVIVFSSPIFTGILGYFILREAWGWFDAVATMLCFFGIILIVRP 150
Query: 304 TVINSG 309
T +
Sbjct: 151 TFLFGR 156
>gi|118588452|ref|ZP_01545861.1| hypothetical protein SIAM614_24262 [Stappia aggregata IAM 12614]
gi|118439158|gb|EAV45790.1| hypothetical protein SIAM614_24262 [Stappia aggregata IAM 12614]
Length = 301
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 84/286 (29%), Gaps = 8/286 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G + A + + +++ + L+++ R + + +
Sbjct: 20 LAGIGLIVLACLSFSWLDATAKYMSASLPTLQIVWMRFVSHVVLSLVLFQVWKK------ 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
TL + + A L F A+ Q T F P + L L E
Sbjct: 74 PTLLKTGRPVLQIVRALCLLGTTIFNFLAVRYLQLAETMSILFAAPFVITALAGPLLGEW 133
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +A ++ L +L++T + A+ + +A + +
Sbjct: 134 AGLRRWMAIIVGFLGVLVVTRPGLGGMHWAALYSVAAMCFYALYALLTRQLTATDSSAGM 193
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLNSFVFCIFSYGIKRAKLSTVGI 261
L I + + +G + T L+ + +F + A +
Sbjct: 194 LIISGIVAAIAMAPAGLSVWVAPPDALTWLLLFATGAFGAGGHFLFIMAHRIAPAPVLAP 253
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
YT + MI I + IVV + + L +
Sbjct: 254 FIYTQIIWMIALGYLIFDDVPTFTTILGAAIVVASGLYILYRERVK 299
>gi|84622305|ref|YP_449677.1| hypothetical protein XOO_0648 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84366245|dbj|BAE67403.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 298
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 101/296 (34%), Gaps = 9/296 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + ++ A + + + L L+V R SLP V + +G
Sbjct: 2 PTTRSPLPAIAWMVVAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+++ P G+ + + V G F+Y L YFV P++ L
Sbjct: 62 PRAIV------PVRWGLHLLRGALGMVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L E + + A + ++ ++++ + + V +A +A I V
Sbjct: 116 PLLGEHVGPRRWAAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAATAYAVAAITVSLLTR 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ LF + G + + + G GL + + R +
Sbjct: 176 TDTPQAMVVWFLLFMAIGAGLLAIPGWVPLHAGHAGLIAGMGLAGALGQVALTQAFMRGE 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
S + +EYTA + +I + + D+ GI+V + + + + +
Sbjct: 236 ASMIAPLEYTALVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRREPIRRADR 291
>gi|310829905|ref|YP_003962262.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
gi|308741639|gb|ADO39299.1| protein of unknown function DUF6 transmembrane [Eubacterium limosum
KIST612]
Length = 322
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/313 (13%), Positives = 92/313 (29%), Gaps = 28/313 (8%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L++ A + + + + + + +++ R L + + L K
Sbjct: 2 KKGYLYIVIATLFFSSMEIALKSVSGQFNAVQMNLTRFLIGGLVLIPFAL---RTLKKKK 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ L + + V F+ A+ + + + PV +F V L E
Sbjct: 59 EHLDKKSLLHFAGLGFLGVVVSMTFYQLAVENANASVVAVLFSSNPVFVLFFSGVILHEV 118
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLL-----SLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + A +L I+ +L++ L +A A G
Sbjct: 119 IKKNHVAAIVLEIIGILVIVNPLHTSLNIAGVVMAILAAVAFALYSVFSKKQCNRYGGVV 178
Query: 198 IEMCVLAIPALFYVVWNGFSG-------------------GEHFFLGNIPDTLFLIGYGL 238
+ +L ++ G S L
Sbjct: 179 VTCGSFLFASLEMLLLIGLSHVGPVADMLSGNGLALFANIPLFTGYTASNVLTMLYICIG 238
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + + I+ ST ++ + P+L + +V IL + + I +++ +
Sbjct: 239 VTGGGYAFYFMAIEETSASTASLVFFFKPVLSPILAVLILHEAVPFNMVIGVLLILAGSI 298
Query: 299 VYLLPTVINSGKN 311
LLP +
Sbjct: 299 ANLLPAFARRKEK 311
>gi|297380413|gb|ADI35300.1| Hypothetical protein HPV225_1267 [Helicobacter pylori v225d]
Length = 298
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 103/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSLENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGVHVPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|296502278|ref|YP_003663978.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
gi|296323330|gb|ADH06258.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
Length = 303
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 92/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQELKHSSL----AGLMVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIP 189
K++ I+ + L ++T L I A F++K P
Sbjct: 120 KQKATIFIILGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++SV + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTSVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|229185271|ref|ZP_04312455.1| Transporter, EamA [Bacillus cereus BGSC 6E1]
gi|228598191|gb|EEK55827.1| Transporter, EamA [Bacillus cereus BGSC 6E1]
Length = 309
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 89/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKT 187
+ER + I +++ + + L + A W Y +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S L + + + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMLSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGLKK 300
>gi|291287539|ref|YP_003504355.1| hypothetical protein Dacet_1633 [Denitrovibrio acetiphilus DSM
12809]
gi|290884699|gb|ADD68399.1| protein of unknown function DUF6 transmembrane [Denitrovibrio
acetiphilus DSM 12809]
Length = 299
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 85/277 (30%), Gaps = 15/277 (5%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG T + + ++ + + R + + +F + + N
Sbjct: 15 IILISLIWGSTFIIIKKGVDTFEPITYLFLRFMVASVFLFIITLPLMKKI--------NR 66
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K + + ++L + + F AL F + + ++ LK+ + +
Sbjct: 67 KLLKDGIILGSVLFIVFLFQTLALKLATATEVGFLTGLYVLFVPVFSALILKKYPHMFSV 126
Query: 149 IAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ LL ++++TL +G + +
Sbjct: 127 LGVLLSAAGMMMVTLESSIGLSTGQIFGIINALFLGLYIILIDVYSRRHHVVLLTTVQIL 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A W L L + F F + + K + IM
Sbjct: 187 TATVLAGVYSWLFEEQNYSAALDPYMLYTILFTGLIATVFCFFVQTAMQKHTTPTKAAIM 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ S FI + +++ + ++VIA++V
Sbjct: 247 FTLEPISSAFFSFFIGGEILNSRQYFGAALIVIAILV 283
>gi|170752178|ref|YP_001783324.1| hypothetical protein Mrad2831_6436 [Methylobacterium radiotolerans
JCM 2831]
gi|170659305|gb|ACB28356.1| protein of unknown function DUF6 transmembrane [Methylobacterium
radiotolerans JCM 2831]
Length = 319
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 80/294 (27%), Gaps = 8/294 (2%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ +LWG + +T+ L + L ++ RV + + + +
Sbjct: 15 AMLLSLSVLWGGSFFFTRVALSALPPLTLVLLRVGLAALILNAVMPLLGLRMPHTARAWA 74
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+G+L + + WG A + F VF +
Sbjct: 75 AFFGMGLLNNAIPFCLIVWGQTHIASGLAAILNATTPLFTVVAAHVFTSDERMTGNRLVG 134
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIA-------VTWSAYCFARKTIPVGSSEGFFIE 199
+I + + + + L L +A ++ R
Sbjct: 135 VLIGLVGVAVMVGPAVLAGLGTDLLAQVAVLGAALSYAFAGIFGRRFRRMGIPPLATATG 194
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L +V G + L + + ++ + A + +
Sbjct: 195 QVTASAFMLLPLVLVADRPWTLPLPGASVWGAVVGIAVLSTALAYVLYFRILATAGATNL 254
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ + P+ I+ +L + + I ++ + S + +
Sbjct: 255 LLVTFLIPVSAILLGSLVLGERLAPQHFIGMALIGCGLAAIDGRVWAFSQQRRR 308
>gi|119512008|ref|ZP_01631104.1| hypothetical protein N9414_12528 [Nodularia spumigena CCY9414]
gi|119463359|gb|EAW44300.1| hypothetical protein N9414_12528 [Nodularia spumigena CCY9414]
Length = 853
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 76/244 (31%), Gaps = 13/244 (5%)
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + + + + S L + A+ + +FV P++S L + ++R N
Sbjct: 610 KKQRILQLSIASGCFLFLSQVLIYVAIGQVATGMAIALFFVYPMMSGLLSWLLFRDRPNG 669
Query: 146 LQIIAALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ A I L++ + +A +
Sbjct: 670 FRSAAMGAIFCGELLVLGGSASLGLANFSLGSSTAIFAGVAFACYVILTRVCATKLHPVS 729
Query: 195 GFFIEMCVLAIPALFYVVWNGFSG--GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + + + ++ S + L G+L + + + GI+
Sbjct: 730 FTVINFTTMLVLSFICLMLPLPSNLSFAVQQSNWLELILSAFILGVLTLVGYVLNNVGIR 789
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ I+ P+L +V + IL++ ++ + + V + Y + K
Sbjct: 790 KLGALPSAIIGAGVPILTVVFAGLILQETLEVAQVMGVVFVSFGVAAYSFEKMRTQVKPS 849
Query: 313 TKKS 316
++
Sbjct: 850 RSEN 853
>gi|187478678|ref|YP_786702.1| membrane protein [Bordetella avium 197N]
gi|115423264|emb|CAJ49797.1| putative membrane protein [Bordetella avium 197N]
Length = 285
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 93/281 (33%), Gaps = 8/281 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ ++ A +L+G+T ++ + + Q + R ++++ + F L
Sbjct: 1 MTRQRALAYIHIAAVLFGLTGVFGELI-QAGAAVITLGRAIFAVGALAFFARLRRRSL-- 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P + +LV + +LA HW F A+ + + + P + +
Sbjct: 58 --LGVLTPAQMFVLVVAGALLATHWVTFFIAVKAGGIAIATLGFASFPAFITLFEGLLFR 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG---IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
E++ + L+ L+++T + LA + ++ G
Sbjct: 116 EKIRAAEWWVLALVTAGLVLVTPAFSLADQGTIGLAWGLLSGLSFALLALTNRRAAAGMD 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
A+ ++ F+ + + + +F + + K
Sbjct: 176 PMQVSCWQNAIVALMVLPFAADALPDVAALDWFWLALLGVFCTGLSHYLFVSSLSKLKAR 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G++ P+ I + + Q ++V A+V
Sbjct: 236 SAGLVIALEPVYAIGFAWVLFSQQPTPRMLSGAALIVAAIV 276
>gi|118401231|ref|XP_001032936.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89287282|gb|EAR85273.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1354
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 86/290 (29%), Gaps = 23/290 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A L + S L++++ R++ +
Sbjct: 21 IFYAIIAPFFTSGMYYCIYLLRSEHSSLQIMNMRMIIGFIINIILCKINKN-----PTYV 75
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +A +++F A Y P+ + FL FL E+L+
Sbjct: 76 EKKEAFKLVLFRGINGACSTLSMFYCFSMMNISDAVVLINTNPIWTNFLAYCFLSEKLSL 135
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
I+ L + ++++ + + + S Y + T+ + +S V+
Sbjct: 136 KTILLCLCSFIGIILVCRPAALFGDENNLDNISSFYRYLGSTLGLLASVSIASASTVIRK 195
Query: 206 PALFYVVWNGFSGGEHFFLG-----------------NIPDTLFLIGYGLLNSFVFCIFS 248
++ + + +G ++ + + + L +
Sbjct: 196 LSVDFQMKSGTQLQYYYIVSIVTSSVLILFKEDQQLITLKFIFIITLLSLNGFLGQYFAT 255
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ K S + + Y +L + +F + I I+V + +
Sbjct: 256 KALTLEKASKIAPLAYLQVVLTFLIDIFFADTEVQLTSIIGAIIIVASSI 305
Score = 44.1 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 11/132 (8%), Positives = 40/132 (30%), Gaps = 1/132 (0%)
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ IA +++ + + I + I + ++ + ++
Sbjct: 21 IFYAIIAPFFTSGMYYCIYLLRSEHSSLQIMNMRMIIGFIINIILCKINK-NPTYVEKKE 79
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
++ G+ + Y +S ++ T P+ + L + + +
Sbjct: 80 AFKLVLFRGINGACSTLSMFYCFSMMNISDAVVLINTNPIWTNFLAYCFLSEKLSLKTIL 139
Query: 289 VFGIVVIAMVVY 300
+ I +++
Sbjct: 140 LCLCSFIGIILV 151
>gi|121597451|ref|YP_990572.1| rarD protein [Burkholderia mallei SAVP1]
gi|167000746|ref|ZP_02266555.1| protein RarD [Burkholderia mallei PRL-20]
gi|121225249|gb|ABM48780.1| rarD protein [Burkholderia mallei SAVP1]
gi|243063421|gb|EES45607.1| protein RarD [Burkholderia mallei PRL-20]
Length = 297
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 105/300 (35%), Gaps = 6/300 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ G A L+ + Y + L ++ L++ + R++W+ PG +
Sbjct: 1 MTGAGDDPQAARGIALSVAASALFALLSAYAKLLAPLTGLDIFAWRIIWTAPGALAVVAL 60
Query: 74 FSGG---LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
LL + + L SA +L + F++A L + S YF+ P+
Sbjct: 61 RGRWPALRELLARAFASRRLALSLAASAGLLGLQLWLFLWAPLHGRMLEVSLGYFLLPLT 120
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ +G ERL+ LQ +A + + + F +
Sbjct: 121 MLLVGRFHYHERLSALQWLALACAAAGVAHEIWATRAFAWPTLVVALGYPPYFVLRRRVN 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S F + L +GG + + L G G +++ +
Sbjct: 181 ADSLALFSVE---MLALLPIAAAMLAAGGTSVARRPLLWAMLLPGLGAISTLALASYLKA 237
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ ++ GI+ Y P+L++ +V +L + + + + + A+ + + + +
Sbjct: 238 SRMLPMALFGILGYVEPVLLVAVAVLVLGEALSWQQLATYAPIWAAVALTAWHGFLIARR 297
>gi|327438722|dbj|BAK15087.1| permease of the drug/metabolite transporter superfamily
[Solibacillus silvestris StLB046]
Length = 292
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 89/280 (31%), Gaps = 18/280 (6%)
Query: 37 WGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + + + + + R + + F + + +++
Sbjct: 16 WGGNFVIGRAVSGDIPPITLAFLRWIVAFLVFFPIAY----NRTKKEWPALKQHWGAVII 71
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ T +A L S TP+I L +FLKERL Q+I LL +
Sbjct: 72 LAITGVAAFNTLVYIGLHDTTSINASLMNSSTPIIIYILSFIFLKERLTKFQMIGTLLSL 131
Query: 156 LSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+L + + L + ++ + + + F + + +
Sbjct: 132 AGVLFIISGGSLQSLLSFSFNKGDLIVLIAVVCWSFYSLLIKKYAGKLPGYSTFLVTIAI 191
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
AI L + V+ + + + + F ++ G+ + GI
Sbjct: 192 GAIMLLPFAVYELLTTSQAIVWNASTIGAIFYVGIIASIVAFLSWNNGVVSLGANKAGIY 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
PL + +V L + + + I V+ + + +
Sbjct: 252 LNFIPLFATIFAVLFLNEQLLIAQVIGGIAVITGVFISSI 291
Score = 35.7 bits (80), Expect = 9.1, Method: Composition-based stats.
Identities = 10/116 (8%), Positives = 34/116 (29%)
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + L + + + +I + + G+
Sbjct: 30 IPPITLAFLRWIVAFLVFFPIAYNRTKKEWPALKQHWGAVIILAITGVAAFNTLVYIGLH 89
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+M + P+++ + S LK+ + + I + + ++ + + S
Sbjct: 90 DTTSINASLMNSSTPIIIYILSFIFLKERLTKFQMIGTLLSLAGVLFIISGGSLQS 145
>gi|306820512|ref|ZP_07454145.1| DMT superfamily drug/metabolite transporter [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304551426|gb|EFM39384.1| DMT superfamily drug/metabolite transporter [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 289
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 97/282 (34%), Gaps = 7/282 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+L F+ + + + L + + +++ + R L +L F I+
Sbjct: 1 MTLNLKKAVFFILMSSFSFSVMQLCVKLSGTTIPLMQQMFFRNLITLFLSTFIIL----- 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ L + A + + YA S + +P+ ++
Sbjct: 56 -KEKGSFFGKREHRKYLFWRAFLGFTSVSGYFYATNHMYLADASIIQYSSPIFISIFTAI 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+++ + +II+ + +++ A+ S+ A + + + +
Sbjct: 115 LLRKKPTNAKIISICVAFFGAILVVRPKFSSESIPAMISLVSSMFTAMSHMALTVANRYE 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ +LF + + +F L ++ + L L GL +YG K A S
Sbjct: 175 KPYTIVFFFSLFSTLCSLPFMMMNFVLPDLREALLLFCIGLFAGMGQIFLTYGYKNAPAS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
V I YT + + SV I + + I ++ + +
Sbjct: 235 KVSIYSYTGVIFSSLYSVTIFGKMLGLYSIIGIVLIFSSALF 276
>gi|186896022|ref|YP_001873134.1| hypothetical protein YPTS_2717 [Yersinia pseudotuberculosis PB1/+]
gi|186699048|gb|ACC89677.1| protein of unknown function DUF6 transmembrane [Yersinia
pseudotuberculosis PB1/+]
Length = 305
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 84/278 (30%), Gaps = 5/278 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV--YFSGGLSLLKD 83
LF A I+W + + ++ + + +R L +L + ++ ++
Sbjct: 3 VLFPLFAVIIWSVNAVVSKISATAIDPAVISFYRWLLALLTLSPFLLLGVIRNWQAIRVY 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV--FLGSVFLKE 141
K + + LA + + AL V I + +V +
Sbjct: 63 WWKLMLLGMLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIAL 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
LI L GI L + ++Y + + +
Sbjct: 123 GSLLSLGGLVWLISAGNPAQLLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPNWQSL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I ++ GF L L L + ++ G+ R +T I
Sbjct: 183 YMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTASI 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + +V L + + + I GI + +V+
Sbjct: 243 FMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVL 280
>gi|163802620|ref|ZP_02196511.1| hypothetical protein 1103602000604_AND4_18256 [Vibrio sp. AND4]
gi|159173508|gb|EDP58328.1| hypothetical protein AND4_18256 [Vibrio sp. AND4]
Length = 286
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 96/289 (33%), Gaps = 12/289 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ L + + ++ + + +E ++ + + R L SL + + +L
Sbjct: 6 LALLLLVIGNLAASLSDVAVKLIEGGINPFQYMFVRQLASLLIILPFYLNQKPNRRVLNQ 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+++ + + V + + ++ P++ + L +FLKE
Sbjct: 66 APITILRAHLILIGSGCMVVA-------VTHLPLATANAVFYAAPILMLPLSILFLKEHP 118
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+I+ + +L++ A+ +A A I V + L
Sbjct: 119 PLSKILLTCFGFIGVLVVLRPG--HFHWAALFALGTATTLAVFNILVRKLPSQQSVVTTL 176
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
LF + + ++ + + +I G+ + ++A + + E
Sbjct: 177 WWTTLFSLPVSAVLAWYYWQPMSGQELTLVIASGVSILSYNGLAVLAYQKAPAGEIALAE 236
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
Y+ + + + + + D + I ++ A+ ++ K +
Sbjct: 237 YSGLVFVTLFGIGWFDEIPDWLTAIGILMI--AVPIFPWIKGRRLAKRQ 283
>gi|159184951|ref|NP_354845.2| permease [Agrobacterium tumefaciens str. C58]
gi|159140229|gb|AAK87630.2| permease [Agrobacterium tumefaciens str. C58]
Length = 297
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 82/295 (27%), Gaps = 22/295 (7%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LWG + + + + L + R L++ + F +
Sbjct: 6 IFLALITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFL-----------PKP 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P ++ A + L L S ++ L VFL ER
Sbjct: 55 NVPWRHMIVYGMAMGFFQFGLLYPAIKLGLPAGLASLVMQSQAFFTLALAVVFLGERPLP 114
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
QI A++ L ++ + + + + + V G + +A
Sbjct: 115 SQIAGAIVAFGGLAVIGMERMTAAALIPLLMGVGSAIAWACGNIVNRRIGQVNVVSFIAW 174
Query: 206 PALFYVVWNGFSGGEHFFL----------GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L V+ + + I+SY + R
Sbjct: 175 TSLVPVLPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYP 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV P++ +S+ + I I +V++ + + + I +
Sbjct: 235 AGTVAPFSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFGRRIGVSR 289
>gi|83644828|ref|YP_433263.1| DMT family permease [Hahella chejuensis KCTC 2396]
gi|83632871|gb|ABC28838.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Hahella chejuensis KCTC 2396]
Length = 295
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 11/279 (3%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
F A +LWG L+T++ + ++++ + + V G L L
Sbjct: 10 GFTAVVLWGALALFTRWSAGIPPFQLLAMTFCIAALLMLGKTVAQGGSLLRLLRQPVRAW 69
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ L + F+ AL S ++ P++ V V LKE + +
Sbjct: 70 LL-----GVGGLFGYHLFYFIALNHAPPVEASLIAYLWPLLIVCFSVVLLKEPAGKMLWL 124
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
LL + + G + +A A + A+
Sbjct: 125 GGLLTLAGCWALLWRPGAGFDLRYLGGYGAALLCALIWSLYSVLSRTLAAVPSDAVGLYC 184
Query: 210 Y------VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +G + L + F + YG+KR + +G++
Sbjct: 185 LGVSALAALCHGVLEETVWPLSGGQWLGVIGLGLGPVGIAFFTWDYGVKRGDIQLLGVLS 244
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
Y APL+ + + + + G++V ++ L
Sbjct: 245 YAAPLISTLLLIGFGEAEFTLTVLLGCGLIVGGALLASL 283
>gi|266620711|ref|ZP_06113646.1| putative membrane protein [Clostridium hathewayi DSM 13479]
gi|288867667|gb|EFC99965.1| putative membrane protein [Clostridium hathewayi DSM 13479]
Length = 295
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 88/275 (32%), Gaps = 10/275 (3%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
++ ++ ++ + + ++R+LW++ + ++ L + K A + S
Sbjct: 20 SLSAIFVKY-SEAPSVVTAAYRLLWTVALMTPVVLGKKEIRRELAGSDKKTVA--LCAVS 76
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
LA+H+ + +L ++ + +FLK RL+ + + + +
Sbjct: 77 GIFLALHFTSWFESLNQTSVASSTAIVCTEVIWVALGYCLFLKGRLSKTAVGSIAVTVAG 136
Query: 158 LLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
L++ L + A +SA V AL
Sbjct: 137 SLLIALSDYSAGGNHLTGDGLALAAAVFSAVYTLIGREARKHMSTTVYTYIVYVFCALVL 196
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ SG G + + IFS+ +K S V + P++
Sbjct: 197 CISTAASGLSFTGYGAASVVVGFLLAVFSTLLGHSIFSWCLKFLSPSFVSASKLCEPVVA 256
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + + + + + + +++Y
Sbjct: 257 AMFAAVLFAEIPALLAVAGGIVTISGVLLYSREQR 291
>gi|120436318|ref|YP_862004.1| hypothetical protein GFO_1972 [Gramella forsetii KT0803]
gi|117578468|emb|CAL66937.1| membrane protein containing DUF6 [Gramella forsetii KT0803]
Length = 292
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 88/282 (31%), Gaps = 12/282 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
V IL G L + + +S + R + + ++
Sbjct: 3 KKAIYAVILCAILAGNNGLLIKSMNSMSTGGIAWFRTGIPVLFLIPFLI--------KDK 54
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ ++ I A+ ++ A + ++ P+ + +F K++L
Sbjct: 55 EFHFRGNTKKMFLASFINAIRMYLYLLAFIYTSIGNAVVLFYTYPLFVTAIEYLFFKQKL 114
Query: 144 NHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
Q +L + ++I ++ ++ +A I S + +
Sbjct: 115 QKAQTGFLVLAFIGIVITYLGKPFSFASNDFIGMLSAIGASIGYAVTVILFKSETPNYSK 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ L + + + ++ L+ VF +F YG+K +T
Sbjct: 175 NQLIFYQNLIGALVFVPFLAFLPDVELPQIGVGILYGLLIGIVVFKLFFYGLKELTAATA 234
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ Y + IV F+L + + +++I+
Sbjct: 235 TTLMYLEVVSAIVLGYFVLDEKLSWNILAGGSLILISSFFIS 276
>gi|292655861|ref|YP_003535758.1| putative drug/metabolite exporter family protein permease
[Haloferax volcanii DS2]
gi|291371011|gb|ADE03238.1| permease; possible drug/metabolite exporter family protein
[Haloferax volcanii DS2]
Length = 293
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 88/298 (29%), Gaps = 20/298 (6%)
Query: 14 LSKENASLP--TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAI 71
+S ++ P + G A + + ++ L +RVL+++ +
Sbjct: 1 MSTPDSDAPISPLAGLGIAVLAV---STSAILVRW-SAAPSLVKAFYRVLFTVALLAPVA 56
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ + + + + LA H+ + +L + P+
Sbjct: 57 LVRHRD----ALATISGRDLLAAGGAGVALAAHFASWFESLNHTTVAASVTLVQSQPLFV 112
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS----------LAIAVTWSAY 181
L ER++ + + + + +M++ + + +A
Sbjct: 113 AVGAWAVLDERVSRRTAVGIGVALAGMALMSVSDFLTAGGAPRPLLGNGLAVVGAVTAAA 172
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ V ++ A +V G LFL
Sbjct: 173 YVLTGRSVRSRVSLVPYVVVVYSVCAAALLVVAVGRGDPLTGYPPREWLLFLGMAVGPGV 232
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F + ++ + + S V + P+ + ++F+L + + +V+ + V
Sbjct: 233 FGHTVINWALAHLESSVVSVSLLGEPVGSTILALFLLGEIPTLPTVLGGAVVLGGIYV 290
>gi|251791926|ref|YP_003006646.1| ribosomal protein L11 methyltransferase [Aggregatibacter
aphrophilus NJ8700]
gi|247533313|gb|ACS96559.1| ribosomal protein L11 methyltransferase [Aggregatibacter
aphrophilus NJ8700]
Length = 287
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/283 (8%), Positives = 77/283 (27%), Gaps = 2/283 (0%)
Query: 29 FVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVF-FAIVYFSGGLSLLKDTLK 86
++ A LW + + ++ + + ++ R+L + V + + ++ +
Sbjct: 3 YILIALFLWSSSFVAGKYTYTMLDPVLMVQLRLLIATMIVLPMFMRVWKRVPKEVRPQVW 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + T G +
Sbjct: 63 WLGFLNYPAIFLLQFIGLSHTSASSASTMLGLEPFLVVLIGHFFFGDKAKTHHWIFGLIA 122
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ +LI + L L V +++ + + V + + ++
Sbjct: 123 FLGVVMLIYGGEETGNISLFGCSLVLLAGVVFASCLRWTQKVIVQLTAQVYTASSIVFGT 182
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ L + + +++ GI + GI+
Sbjct: 183 ITCIPFTLWLTESWQIHWNWQGVAGLLYIGIGCSWLAYYLWNKGINSVDSNLAGILVSLE 242
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ I+ +V +L + I + + V+ ++ + +
Sbjct: 243 PVFAIILAVLLLGENISPLSWLGILAVIATTLISSVYPRLIRR 285
>gi|226312257|ref|YP_002772151.1| hypothetical protein BBR47_26700 [Brevibacillus brevis NBRC 100599]
gi|226095205|dbj|BAH43647.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 295
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/284 (10%), Positives = 92/284 (32%), Gaps = 13/284 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + LWG ++ L ++ L + R+L++ + + +
Sbjct: 5 YLLLLFCVTLWGSNFVFGSMLVKEFPPLFLADVRLLFTSMFLIIYAWLAKKFVKITA--- 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ + + LLT S ++P+++ L S+FLKE+
Sbjct: 62 --RELGLLVLLGLIGTLANQTAYFNGLLTTDATTASLILSLSPIVTAVLASLFLKEQFTL 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
I + L ++ + ++ + + A ++ + I+ + +
Sbjct: 120 RMKIGSGLALMGTFFVVGIGAGLSITKGVLLIVIAMVAFSSSMIIIRKLTQTIQPFIATV 179
Query: 206 PALFYVVWNGFSGGEHFFLGN-------IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + ++ L+ +++ +K
Sbjct: 180 YSTTVGTLFLTPAAMLTIEPGAQISHEVWAWAMLILTAILMQGICGIVWNQQLKVVGTGK 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
I P + ++ +L + +++ ++V+ ++V +
Sbjct: 240 AAIFLNLQPFVAMLVGFLLLGSQVTSIQVGGSLLIVVGVIVASV 283
>gi|194446093|ref|YP_002043011.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194404756|gb|ACF64978.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
Length = 315
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 104/304 (34%), Gaps = 12/304 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIV 72
E T G L V A +LWG + + Q++ + +S + R+L++ G+
Sbjct: 12 NEEKMGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVTF 69
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F G + A+ +L+FS F+ + + F++P I V
Sbjct: 70 SFMHGDKIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIV 129
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFAR 185
++ + R L + A L ++ ++ H L IA ++A +
Sbjct: 130 AWFALARRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTT 189
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + G + ++ G HF + F + S F
Sbjct: 190 WPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFS 249
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ G + I+ PL + S+ +L + +++ ++++ L +
Sbjct: 250 LYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSR 309
Query: 306 INSG 309
+
Sbjct: 310 RRAR 313
>gi|52142819|ref|YP_084009.1| drug/metabolite exporter family protein [Bacillus cereus E33L]
gi|51976288|gb|AAU17838.1| transporter, drug/metabolite exporter family [Bacillus cereus E33L]
Length = 304
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ SVF+ E++ I
Sbjct: 72 ---IFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F ++ + + +
Sbjct: 129 GGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFVAWIWLGEVPTLVS 271
>gi|323142481|ref|ZP_08077301.1| putative membrane protein [Phascolarctobacterium sp. YIT 12067]
gi|322413058|gb|EFY03957.1| putative membrane protein [Phascolarctobacterium sp. YIT 12067]
Length = 296
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/288 (10%), Positives = 90/288 (31%), Gaps = 7/288 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G + A WG+ + Q+L Q ++I + + +++ +
Sbjct: 8 LKGIFLIIGAATCWGMGGVAGQYLYQYHQADMIWLCMARQILAGCMFLLFAAFVQKQDIF 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ ++ FS + F Y + + ++ P+ + S ++
Sbjct: 68 AILKADTWNIIEFSFLGILGAQLGFYYTIGLCNAATATVLQYMAPIYVMLWMSYKSRKIP 127
Query: 144 NHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ ++I + ++ + ++ H L++ + S ++ K +
Sbjct: 128 DGRELIGIVGALVGVFLIATHGSLDSLAISPIALTIGVLSALSYAYYSIKPGQMLKKYTA 187
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + ++ F + + G+K
Sbjct: 188 ATLIGWGQLISGVALIIWRNPFTPAGHWDMSGYLAFAYLLLGATIASYAFYLAGLKIVGP 247
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ PL I+S V +L + I ++ +++ LP
Sbjct: 248 TKASLISCAEPLASIISVVLLLNTELAGADYIGMACIIFTVLLLSLPK 295
>gi|331653371|ref|ZP_08354376.1| putative transmembrane subunit [Escherichia coli M718]
gi|331049469|gb|EGI21541.1| putative transmembrane subunit [Escherichia coli M718]
Length = 306
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 85/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGIFLLAFLLLRGHKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ L +L+ + + + F S G
Sbjct: 63 PPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL-CFSRLFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + + + + Y I+ +
Sbjct: 182 AIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + + + G++V A+V+ L + K
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAK 293
>gi|254475108|ref|ZP_05088494.1| Integral membrane protein DUF6 [Ruegeria sp. R11]
gi|214029351|gb|EEB70186.1| Integral membrane protein DUF6 [Ruegeria sp. R11]
Length = 309
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 77/289 (26%), Gaps = 6/289 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ +W + + S L ++ R L S Y L +
Sbjct: 3 LRALAMGLAFAFMWSSAFTSARIIVADASPLYSLAFRFLISGLIGVAVARYLGQSWRLTR 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+K G+ + + ++ + I+++ R
Sbjct: 63 GQMKATIVFGICQNALYLGLNFVAMESIEASLAAIIASTM--PMLVAIALWAVYGERLPR 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG---FFIE 199
L +IA ++ + ++ + +G+ L + + G++ G +
Sbjct: 121 LGVAGLIAGVIGVALIMGTRISAGVDLFGVMLCGIGVLALTLATLALRGATSGGNYMMVV 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ I + V F+ + I+ + R
Sbjct: 181 GLQMLIGSAVLFVVAPMVETFRLEPSWPLALAFVYTTLVPGLTATFIWVLLLNRIGAVRA 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P+ + + +L + + + + IV ++ L
Sbjct: 241 ATFHFLNPVFGVAVASVLLGERLGVLDLVGVAIVTFGILAVQLARQKAQ 289
>gi|153837439|ref|ZP_01990106.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ3810]
gi|149749239|gb|EDM60024.1| permease of the drug/metabolite transporter [Vibrio
parahaemolyticus AQ3810]
gi|328470226|gb|EGF41137.1| hypothetical protein VP10329_05497 [Vibrio parahaemolyticus 10329]
Length = 302
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 83/293 (28%), Gaps = 17/293 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + + + +
Sbjct: 3 YLLPFFTVMIWGGNSIVNKMAASTIEPSAMSFYRWFVAMVLLTPFCL----PAVIKQRHV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT + + P+ISVFL L + ++
Sbjct: 59 IRPYLTKLAFLALLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSVSM 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
L I+ ++ + L M H + +A A
Sbjct: 119 LSIVGGVISLGGLAFMLGHGDVTYFLHQDMTQGDSLMLLAALVYAAYCVLLKRWKMPFNS 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + S L + F ++ I
Sbjct: 179 LTLVYMQGFFSVIMLTPLWLSSEQLL--PSQEALPLIAYAGIAASIFAPLMWVKAIDLIG 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ + + +L + I I +V+ +++ +
Sbjct: 237 ADSSAMFMNLMPVVSVALASTLLGEEIHVYHIIGGLMVISGVILSQIKVRKKQ 289
>gi|15599483|ref|NP_252977.1| hypothetical protein PA4287 [Pseudomonas aeruginosa PAO1]
gi|107100128|ref|ZP_01364046.1| hypothetical protein PaerPA_01001149 [Pseudomonas aeruginosa PACS2]
gi|116052321|ref|YP_792632.1| hypothetical protein PA14_55720 [Pseudomonas aeruginosa UCBPP-PA14]
gi|254244901|ref|ZP_04938223.1| hypothetical protein PA2G_05775 [Pseudomonas aeruginosa 2192]
gi|296390985|ref|ZP_06880460.1| hypothetical protein PaerPAb_22654 [Pseudomonas aeruginosa PAb1]
gi|313106805|ref|ZP_07793018.1| putative membrane protein [Pseudomonas aeruginosa 39016]
gi|9950508|gb|AAG07675.1|AE004845_1 hypothetical protein PA4287 [Pseudomonas aeruginosa PAO1]
gi|115587542|gb|ABJ13557.1| putative membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198279|gb|EAZ62342.1| hypothetical protein PA2G_05775 [Pseudomonas aeruginosa 2192]
gi|310879520|gb|EFQ38114.1| putative membrane protein [Pseudomonas aeruginosa 39016]
Length = 296
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 93/296 (31%), Gaps = 13/296 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A +W + + + E+ R W L G+ L + L
Sbjct: 3 YLFPLLAVFIWAGNTVVNKLAVGIIQPAEIGFFR--WLLVGLALTPFMLGPVLRNRRYIL 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
N +L +AV+ YA + P++S+ L S L RLN
Sbjct: 61 ANLGKFVVLGLLG--MAVYQSLAYYAAALTSATNMGIILSLMPLMSLGLASSILAHRLNA 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ AL+ + ++++ G+ L + V AY + S +
Sbjct: 119 GALLGALVSLAGVVLVISQGHLGALLEHGVNLGDAMMIVATLAYAVYSVLLKKWSLKLPA 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ L + + + L L L + + +G+ R S
Sbjct: 179 MQLLYLQVLVAILALLPLYLLSPRTGLNAANLPLVLYAALFASIVAALAWMHGVARLGPS 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + P++ + +L + + + + + +++ +
Sbjct: 239 RMALFFNLLPIITACIATLVLGERLTVHHLVGGALTLAGVLLAEFWQRRPARLRSA 294
>gi|325964077|ref|YP_004241983.1| DMT(drug/metabolite transporter) superfamily permease [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470164|gb|ADX73849.1| DMT(drug/metabolite transporter) superfamily permease [Arthrobacter
phenanthrenivorans Sphe3]
Length = 310
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 85/294 (28%), Gaps = 13/294 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M +++ A + W + Q ++ + L++ R + + +
Sbjct: 1 MRAAVYLILANLFWAGNFVVGQAAMKTMEPLQLTFWRWVLAAVPLLVLAHAVEKP----D 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +L+ S ++ + AL S P + + + V L++R
Sbjct: 57 WRAALRRWPVLLLLSGLGMSGYTLLLYSALQHTSALNASLVTAANPALILVMAVVLLRDR 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEG 195
L + L +L +LI+ L + V I
Sbjct: 117 PRPLSWVGVALGLLGVLIVLTAGSFERLLTFSINTGELLIVGAITVWGLYTIIARRLDVP 176
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
V A ++ + G + + +++ +KR
Sbjct: 177 AITSTAVQVAMAAVVLLPFAVATGSGLPGSPSEGWSLAFIAVFPSLGSYLLWNLALKRTS 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ G + V +V +L QPI + + +V+ +++
Sbjct: 237 AANAGNYLNLIAVFTAVITV-VLGQPITVPQILGGALVISGVLLTSAGGKERQR 289
>gi|229069248|ref|ZP_04202538.1| Transporter, EamA [Bacillus cereus F65185]
gi|228713735|gb|EEL65620.1| Transporter, EamA [Bacillus cereus F65185]
Length = 303
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KREWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGTRFLFAGIILLFVQIIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQELKHSSL----AGLIVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ ++ L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIVVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|206975720|ref|ZP_03236632.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217958418|ref|YP_002336966.1| transporter, EamA family [Bacillus cereus AH187]
gi|222094577|ref|YP_002528637.1| transporter, drug/metabolite exporter family [Bacillus cereus Q1]
gi|206746182|gb|EDZ57577.1| transporter, EamA family [Bacillus cereus H3081.97]
gi|217065066|gb|ACJ79316.1| transporter, EamA family [Bacillus cereus AH187]
gi|221238635|gb|ACM11345.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus Q1]
Length = 303
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNVGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQILGTMIVVTGCYLFS 285
Score = 35.7 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WMIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|149203219|ref|ZP_01880189.1| possible transporter, RarD family, DMT superfamily protein
[Roseovarius sp. TM1035]
gi|149143052|gb|EDM31091.1| possible transporter, RarD family, DMT superfamily protein
[Roseovarius sp. TM1035]
Length = 317
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/312 (12%), Positives = 104/312 (33%), Gaps = 16/312 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY 73
S ++ + G + + + + + V V ++ + R + + ++
Sbjct: 8 SASPSTDRILAGVALMLGFCVTAPLLDVAAKLASTSVPVGQITAARFIVQCALMTPFVLI 67
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + + A +L V FI A+ FV P I +
Sbjct: 68 MGLSLRVPRAHWLALLFR------AVLLFVSTFCFIAAIRVMPLADALAIVFVAPFIVLL 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G +L E + ++ AA++ + +L++ S ++A+ +A FA +
Sbjct: 122 VGKFYLGEDVGPRRVGAAMVGFVGVLLVIQPSFAAFGAVALFPLGTAVGFAFYILVTRGL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + L + L+L+G G +
Sbjct: 182 SRRMHPVTLQFHTGLIASLLCLPVVILAEGTGIEMLDPVWPEGIAWLWLLGVGFFATLSH 241
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +Y + A +T+ ++Y + + + + + + I++ + + +
Sbjct: 242 MMMTYALSLAPSATLAPLQYLELPVATLLGYLVFRDFPNALTLTGIAIIIGSGLYMIHRE 301
Query: 305 VINSGKNKTKKS 316
+ + + T+++
Sbjct: 302 RVTARQLMTERA 313
>gi|325921250|ref|ZP_08183110.1| DMT(drug/metabolite transporter) superfamily permease [Xanthomonas
gardneri ATCC 19865]
gi|325548217|gb|EGD19211.1| DMT(drug/metabolite transporter) superfamily permease [Xanthomonas
gardneri ATCC 19865]
Length = 298
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/287 (16%), Positives = 96/287 (33%), Gaps = 9/287 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
++ A + + + L L+V R SLP V + +G S++
Sbjct: 11 ITWMVAAVACFSLMDAGMKLLSAHYPPLQVTLLRAAASLPFVLVWVFATAGPRSIV---- 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P G+ + + V G F+Y L YFV P++ L L E +
Sbjct: 67 --PVRWGLHLLRGVLGMVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSVPLLGEHVGP 124
Query: 146 LQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A + ++ ++++ + + V +A +A I V ++
Sbjct: 125 RRWTAIGIGLVGVILVLRPGVDGLISLPGLMVLLAATAYAIAAITVSLLTRTDTPQAMVV 184
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
LF + G + + G GL + + R + S + +EY
Sbjct: 185 WFLLFMAIGAGLLAIPGWVPLRGEHAWLIAGMGLAGALGQIALTQAFLRGEASMIAPLEY 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
T + +I + + D GI+V + + + + +
Sbjct: 245 TGLVWVIGWDWLLWQTLPDNWTWTGAGIIVASGLYLLRRERIRKADR 291
>gi|289623982|ref|ZP_06456936.1| hypothetical protein PsyrpaN_02355 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289648769|ref|ZP_06480112.1| hypothetical protein Psyrpa2_13605 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330868971|gb|EGH03680.1| putative DMT superfamily transporter inner membrane protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 304
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 86/301 (28%), Gaps = 4/301 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + K +G L+ + V + T + +
Sbjct: 58 RYRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAALVLFAAASWAFGSVLSKHMPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMVSAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + Y P + ++ V + I + +++ A+V+ LP S K
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGIEECMAMVVIISAVVLIGLPQWRRSAVRK 297
Query: 313 T 313
Sbjct: 298 V 298
>gi|222094206|ref|YP_002528263.1| transporter, eama family [Bacillus cereus Q1]
gi|221238261|gb|ACM10971.1| transporter, EamA family [Bacillus cereus Q1]
Length = 316
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/305 (16%), Positives = 104/305 (34%), Gaps = 21/305 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPQEVGEQILFAGYRFFLSGVMLLFFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+S K T K +G+ + + G + + + S+F + +
Sbjct: 74 MSFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN +II + +++ ++ H GI L L IA +Y
Sbjct: 130 YKDDALNMKKIIGVSIGFCGVVLVNVPSDGSLSFHFGIGSLLLLIAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G G F +I L LI L++ FCI++
Sbjct: 190 SKTLDVGYMTAYQMIFGSIGLLCIGGLQVGVMPFTFSIHAILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRTPAKQKM 309
Query: 310 KNKTK 314
+ + +
Sbjct: 310 EQEKQ 314
>gi|121535876|ref|ZP_01667674.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
gi|121305541|gb|EAX46485.1| protein of unknown function DUF6, transmembrane [Thermosinus
carboxydivorans Nor1]
Length = 328
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/304 (12%), Positives = 91/304 (29%), Gaps = 17/304 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G + +F Y++W T L + + R++ + + L
Sbjct: 18 STKGLMHLFVVYVVWSSTYLAIRVAVAPGSGFPPFLMGGTRMVLAGLILLALAAIGGHRL 77
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ KD G+L++ V ++A + +P+ F+ +V
Sbjct: 78 KMTKDEFIRTAIAGVLLWVGGNGLV-----VWAEQSANSGFACLMVSSSPIWVAFINAVQ 132
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARKTIPV 190
+ + L I + LL + ++ + + + +A A +T
Sbjct: 133 ARRLPSPLLIASLLLGFAGIGVLMAPAIMSGNAAEFSSGIALTLAAISWAAGSVYQTRCP 192
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S E I +L + + + + F F Y
Sbjct: 193 VSLETPVASGYQHLISSLGFFLLALIFQEPVPQPTTSAWAAWAYLVIFGSVLAFTSFVYS 252
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ ++ Y P+L + ++L +PI +V++++ +
Sbjct: 253 LRLLPINIAMTYAYVNPVLALFLGAWLLDEPITAWTIAGAVMVIVSVFGIFRDRYRQEQR 312
Query: 311 NKTK 314
Sbjct: 313 QANA 316
>gi|213968955|ref|ZP_03397095.1| rarD protein [Pseudomonas syringae pv. tomato T1]
gi|302062965|ref|ZP_07254506.1| rarD protein [Pseudomonas syringae pv. tomato K40]
gi|302134584|ref|ZP_07260574.1| rarD protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213926254|gb|EEB59809.1| rarD protein [Pseudomonas syringae pv. tomato T1]
Length = 307
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 113/295 (38%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A +L+G+ YT ++ + E+ R+L ++P ++ + L
Sbjct: 16 KGVVLSVLASVLFGVMYFYTSLMKPLDGEEIFGWRMLLTVPCATLFMLVSGDWRRVRDLA 75
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + L+ S+ +L F++A L + S YF+ P+ +F G V E
Sbjct: 76 ARLWQRPLLIFGLLLSSMLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMIFTGRVVYGE 135
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L++LQ +AA ++ + G + F + G +
Sbjct: 136 HLSYLQKVAAAFAMIGVGHELWRLGSFSWETLLVAGGYPLYFVLRRKLKTDHLG---GLW 192
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L +W +G H L + G++++ + + S G+
Sbjct: 193 FDMLLMLPIGLWFISNGHPHAIQQAPLLYLLIPLLGVISASALVSYIVASRLLPFSLFGL 252
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y P+L++ ++ + + I + + + +A+VV ++ + + + +
Sbjct: 253 LSYVEPILLVGVALLLG-ESIGRDEWLTYLPIWLAVVVLMIEGAKHMLAQRRRDA 306
>gi|218897690|ref|YP_002446101.1| transporter, EamA family [Bacillus cereus G9842]
gi|218545267|gb|ACK97661.1| transporter, EamA family [Bacillus cereus G9842]
Length = 304
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ L S+FL E++ I
Sbjct: 72 ---IFMFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILASIFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + +++ G + + +A + F +T + + +
Sbjct: 129 GGVISFIGIALISFSQGDAIQLNSGGLFILLAAISESLYFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + L + +Y I A +
Sbjct: 189 LSSTVCMLIFLPGMYQEILAAPLEVNVSVLYLGLFPTVLPYIALAYIISHAGAAEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPVTACFIAWLWLGEVPTLVS 271
>gi|114778284|ref|ZP_01453143.1| hypothetical protein SPV1_13127 [Mariprofundus ferrooxydans PV-1]
gi|114551386|gb|EAU53942.1| hypothetical protein SPV1_13127 [Mariprofundus ferrooxydans PV-1]
Length = 310
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 75/256 (29%), Gaps = 8/256 (3%)
Query: 49 QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFF 108
++ EV+ R +L + + + + A +
Sbjct: 36 ELPQSEVVFFRNFIALLILLPLM--------QRNHVSLKTEHFRFHLLRAGAGLTAMYLY 87
Query: 109 IYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP 168
YA+ + +P+ V+LKE+ + IA + ++ L ++ S
Sbjct: 88 FYAINGLPLADALLLNYTSPIFIALFAVVWLKEQWTIARRIALAISLVGLALLFRPSAHL 147
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ S V + ++ AL + F
Sbjct: 148 FSLPGLLGLASGAFAGLALTTVKRLSATENPVTIVVWFALISSAISALPMLWSFQWPGHE 207
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+L+ GL S ++ + A ++ V + Y++ L + F ++
Sbjct: 208 AWGWLLAVGLFGSLGQLGLTWAYQHAPITQVSPLGYSSLLFAGLIGFFAWQEIPGIPGLA 267
Query: 289 VFGIVVIAMVVYLLPT 304
+V+A ++
Sbjct: 268 GMLCIVVAGIIVARER 283
>gi|47567237|ref|ZP_00237951.1| integral membrane protein [Bacillus cereus G9241]
gi|47556080|gb|EAL14417.1| integral membrane protein [Bacillus cereus G9241]
Length = 316
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 99/299 (33%), Gaps = 21/299 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLE---QVSVLEV------ISHRVLWSLPGVFFAIVYFSGG 77
+ A LWG + + + EV +R S + F
Sbjct: 14 FIAAIVATFLWGSAFPFIKLSYAELGIQPKEVGEQILFAGYRFFLSGVMLLFFFKALGKD 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ K T K +G+ + + G + + + S+F + +
Sbjct: 74 MNFKKGTGKQLVQIGLFQTFLQYICFYIGMSYSSGIEGAIISGTSSFFQ----ILLAHFL 129
Query: 138 FLKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + LN ++I + +++ ++ H GI + L A +Y
Sbjct: 130 YKDDALNVRKVIGVSIGFCGVILVNVPSDGSLSFHFGIGSVLLLSAAMLYSYGNILAKEG 189
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + ++ + ++ + G F +I L LI L++ FCI++
Sbjct: 190 SKTLDIGYMTAYQMIFGSIGLLCIGALQVGVMPFTFSIHAILMLIYLSFLSAAGFCIWNT 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K K+ V + + P+ ++ S IL + I + V ++V
Sbjct: 250 IMKYNKVGKVSMYMFFIPVFGVLLSSMILGEAIHSFVLFGLACVAAGIIVVNRVPAKQK 308
>gi|110633912|ref|YP_674120.1| hypothetical protein Meso_1559 [Mesorhizobium sp. BNC1]
gi|110284896|gb|ABG62955.1| protein of unknown function DUF6, transmembrane [Chelativorans sp.
BNC1]
Length = 316
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 86/287 (29%), Gaps = 9/287 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G L++ A T+ L Q+ + +VI R + + + I G SL
Sbjct: 6 NLRGALYMAIAMAALTTNDTLTKSVLPQMGMGQVILLRGVVATSLLCILIFRTDGFPSLK 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ T + L + P+ ++ L E
Sbjct: 66 FLAHRSILTRVACEIGGTTTFIFA------LAHLPLANVTAVLQALPLAVTMGAAMVLAE 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE--GFFIE 199
+ + A + + ++I+ + ++ + A + + +
Sbjct: 120 PVGWRRWSAISVGFVGVMIIVRPGLGDFSAWSLLALLTVGFCAVRDLSTRLIPQDIPSVG 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ V + + +P L + G+L + +++ +S +
Sbjct: 180 VSVATSAGVTLSGAALLPFTGGWQPVEVPSALSIFLAGILVVVGYQFVIKAMRQGDISFM 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
YT+ L I+ + D + +VV + + L I
Sbjct: 240 APFRYTSLLWAILLGFLVFGDVPDALMLFGSALVVGSGLYALYRERI 286
>gi|330873566|gb|EGH07715.1| putative DMT superfamily transporter inner membrane protein
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 304
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 87/301 (28%), Gaps = 4/301 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + K +G L+ + V + T + +
Sbjct: 58 RYRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A W A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAMVLFAAAWWAFGSVLSKHMPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + Y P + ++ V + I + +++ A+V+ LP S K
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGIEECMAMVVIISAVVLIGLPQWRRSAVRK 297
Query: 313 T 313
Sbjct: 298 V 298
>gi|298250927|ref|ZP_06974731.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297548931|gb|EFH82798.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 312
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 88/292 (30%), Gaps = 16/292 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A I+WG T L Q ++ V ++ R + +
Sbjct: 30 ITLMVLATIVWGSTFLVVQETIKLTGVFTFLTLRFSLGALTLILIF--------HKRLRH 81
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
N +G L + + L +F + L LK++
Sbjct: 82 LNRYELGAGSCIGLFLFAGFALQTWGLRYTTSSEAAFITGLYVPFVTILSLFILKQKPTR 141
Query: 146 LQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + ++ + L +++ + G+ L + +A + ++ +
Sbjct: 142 MALTGVVISFVGLTLISFNKDLVLTFGLGELLVLGCAVANALHIVTISKFAPKADPMNLA 201
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + AL V +G L + +F F + ++ + +
Sbjct: 202 IVQILLTALLSAVAIPLAGEPLVLPPAPVWLSVLFMGMIATAFCFAVMNWVQQSVSSTQA 261
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ V + + + + +++ MV+ L ++
Sbjct: 262 TLVYALEPVWAGVFGYAV-GEMLTPLGWFGCVCILLGMVIGELRLWPRRSRS 312
>gi|254470061|ref|ZP_05083465.1| conserved hypothetical protein, putative [Pseudovibrio sp. JE062]
gi|211960372|gb|EEA95568.1| conserved hypothetical protein, putative [Pseudovibrio sp. JE062]
Length = 324
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 92/292 (31%), Gaps = 9/292 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G + A L + + L + V +++ R + L I+
Sbjct: 29 SNNTRGICWALLATFLMAVMSTIIKLLGDRLHVTQILMLRQFFMLVISAPVII------- 81
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+A + + + + F A++ ++ F FL
Sbjct: 82 RGFPGSLKTQAPLLHLGRILLASSAMYFGFTAVIHLPLAESTVIGFARTFFITIFAVFFL 141
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
KE + +I A +L L ++I+ G + + ++ C A I +
Sbjct: 142 KEVIGVHRISATILGFLGVMIIVQPGTGAEMSIYSFMAILASACAALVGIILRKVTQVDQ 201
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +L A F + G ++ ++ D + L+ ++ +K + S
Sbjct: 202 PITILTFQATFVGLIMAPFGIYNWVSIDLNDAILLLCLAGVSWGAQMSNIQALKFGEASA 261
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ +Y + + SV I + I+V A + L + K
Sbjct: 262 IAPFDYIRLVYAAIISVVIFGVWPLWTTYLGGAIIVAASLYTLHRETVLGKK 313
>gi|254463419|ref|ZP_05076835.1| transporter, dme family [Rhodobacterales bacterium HTCC2083]
gi|206680008|gb|EDZ44495.1| transporter, dme family [Rhodobacteraceae bacterium HTCC2083]
Length = 317
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 85/271 (31%), Gaps = 7/271 (2%)
Query: 39 ITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
+ + L S +++I VL+ P V ++ P+ F
Sbjct: 20 THDVIVKILGANYSPIQIIFFSVLFGFPWVTLMLI------RDASSGNLRPRHPYWTAFR 73
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+ YA T F TP++ L E + + +A L+ +
Sbjct: 74 TLATTLTGVSAYYAFSTLPLAQVYAILFATPLLITIFAIPILGETVRIRRWVAVLVGLGG 133
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
+L++ L A +A+ A +I V + +L P + V G
Sbjct: 134 VLVVLKPGAQDLTLGHAAALVAAFGSAFASIIVRKIGKDERSVVLLIFPMMSNFVVMGAL 193
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
G + + + L+ + K + V M+Y+ + + +
Sbjct: 194 LGFVYKPMPVEHMGGIALMSLMALLGSALVIAAYKAGEAVIVAPMQYSQIIWATLFGALL 253
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I+ + I++ + + +L +
Sbjct: 254 FNETIERATILGAVIIIGSGLYIVLREGRAN 284
>gi|167747014|ref|ZP_02419141.1| hypothetical protein ANACAC_01726 [Anaerostipes caccae DSM 14662]
gi|167653974|gb|EDR98103.1| hypothetical protein ANACAC_01726 [Anaerostipes caccae DSM 14662]
Length = 268
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 83/272 (30%), Gaps = 8/272 (2%)
Query: 40 TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
+ + + +E R L +L F I G K + + +
Sbjct: 1 MNAFVKLSGDLPSIEKSFFRNLVALIFAFVMIKRSGAGFRF------QMKNLHWFILRSL 54
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
+ YA+ S ++P + + L+E++ Q+ + +
Sbjct: 55 AGTLGIFCNFYAVDHLVLSDASTLNKLSPFFVIVFSYLILREKITVFQLTCITSAFIGSM 114
Query: 160 IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE--MCVLAIPALFYVVWNGFS 217
+ S + L + + FA G E ++ + F +
Sbjct: 115 FIVKPSFAAVSVLPALIGFLGGMFAGCAYACVRKLGTRGERGPFIVFFFSTFSCISCIPF 174
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
+F + ++L+ GL + + A + I +YT + + +F+
Sbjct: 175 MIGNFHPISGLQLVYLLLAGLAAAGGQFAITAAYTYAPGKEISIYDYTQIIFSTLLGLFL 234
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Q D + + I++ A VV +
Sbjct: 235 FGQMPDGFSILGYVIIITAAVVMFFYNNRRNK 266
>gi|52784297|ref|YP_090126.1| YwfM [Bacillus licheniformis ATCC 14580]
gi|163119231|ref|YP_077714.2| membrane protein YwfM [Bacillus licheniformis ATCC 14580]
gi|319648772|ref|ZP_08002983.1| YwfM protein [Bacillus sp. BT1B_CT2]
gi|52346799|gb|AAU39433.1| YwfM [Bacillus licheniformis ATCC 14580]
gi|145902737|gb|AAU22076.2| conserved membrane protein YwfM [Bacillus licheniformis ATCC 14580]
gi|317389191|gb|EFV70007.1| YwfM protein [Bacillus sp. BT1B_CT2]
Length = 294
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 83/291 (28%), Gaps = 2/291 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LFV A ILWG T F ++ + L + R+ + F G L +
Sbjct: 5 VLFVLLAAILWGTTGTTQAFAPKEAAPLVFGAVRMAVGGITLLLFA-AFRGQLKRSGWPV 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + + + + S + + V +
Sbjct: 64 KTLIIAALSMAFYQPFFFSAVSLSGIAVGTVVAIGSAPIIAGCLEWLVFKKVPQTKWWIA 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
A + +L + + + LA+ S + + + + +
Sbjct: 124 TAAAIAGVALLFIPSASSGGSFLGILLALGAGLSFAVYTLTSKKLLQKQKPEAVTGTVFF 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + F + + L + + +F+ G+ + ST +
Sbjct: 184 LSAVLLAPLLFLYDLGWISSVQGMAVSLYIGVIATGAAYLLFTTGLAKVPASTAVTLSLA 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
PL + ++++ + V ++++ + + + K+
Sbjct: 244 EPLTASLLGTVLVRESLPLVSWAGIALLLLGIFYISYQPKKDKINAEQMKA 294
>gi|297184335|gb|ADI20452.1| permeases of the drug/metabolite transporter (dmt) superfamily
[uncultured alpha proteobacterium EB080_L43F08]
Length = 290
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 91/288 (31%), Gaps = 5/288 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G + + ++ I +++L + +V ++ R + V F G +
Sbjct: 3 QSNLRLGIILMIATTFVFAIQDGISRYLAAEYNVFMIVMIRYWFFAAFVIFWAKANVGSI 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ILAV + + + + + P+I L
Sbjct: 63 KKA----ASTHQPILQCLRGIILAVEICIMVLGFVLIGLIESLAIFTIYPLIIAALSGPI 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ER+ + +A + ++I+ AI SA FA +
Sbjct: 119 LGERVGWRRSVAICIGFFGIIIILQPGYSVFSVYAIFPLCSAILFALYGLLTRYVARQDS 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +V G + N D +++ + +F + + A+ S
Sbjct: 179 AATSFFWTGIAGLVVTTLVGIFFWETMNSKDWMWMCLLCVTGAFGHFLLIKCYEVAEASG 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
V Y + ++ + + + I IV++A + L I
Sbjct: 239 VQPFAYLQLVFGSALAMIVFGESLKLSTAIGSSIVILAGLYTLWREKI 286
>gi|299536973|ref|ZP_07050278.1| putative transport protein [Lysinibacillus fusiformis ZC1]
gi|298727553|gb|EFI68123.1| putative transport protein [Lysinibacillus fusiformis ZC1]
Length = 287
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 49/288 (17%), Positives = 102/288 (35%), Gaps = 12/288 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV A ILWG+T +L+ VS + V R + +
Sbjct: 5 LFVLLAAILWGMTGTAQTYLDQGVSPIAVAMVRSAIGGSLLLVITIIMRK------INFL 58
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ +A+I FF LT T + PV S L + K R +
Sbjct: 59 RWSWKWTILAAASIALFQGLFFSSIPLTGIAIGTFATIGSAPVFSGVLEWLVWKTRPTAV 118
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+A L+ I+ L++ +++G + + + S + + + + E +
Sbjct: 119 WGLATLMAIIGCLLLFMNNGEDSVHVGGFILALCAGLSFAFYTNISKKLMAQEEALPAVA 178
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ +++ GG + + L + S + +F G+++ S+
Sbjct: 179 MTFSICALFLLPFSLQGGFSWLVNVHNLWTMLFMGIMCTSVAYFLFLSGLQKISSSSAVT 238
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ PL + VF++ + + V + +++ +VV L
Sbjct: 239 LSLAEPLTAAILGVFLVGEHLSVVSWLGVAMLLGGIVVLTLGGRKKLK 286
>gi|261494151|ref|ZP_05990654.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261496008|ref|ZP_05992418.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308258|gb|EEY09551.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261310317|gb|EEY11517.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 282
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 76/277 (27%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V +L+G + ++ ++ S ++ RV+ + + ++ L L
Sbjct: 3 KRTLALLKVHGTAVLFGASVIFGALIQS-SAETIVLGRVMIAFAIISLYFLWKKQPLVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
A + +A + + + SF FV S+F
Sbjct: 62 NLQQMAQLAFSAALLAAHWVTFFVAVKVGGVAVATLGFASFPAFVALFESLFFREKLRFR 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +IA + ++ + L V + +
Sbjct: 122 EVVL--LIAITVGLILVTPEFTFGNQATQGLLWGVLSALVYGILAVANRRTMSKISGVQA 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ S E + L + + +F + T +
Sbjct: 180 SWWQYIFATLFLLPLSITEFPSVSTQDWFWIFCIGFLCTTLAYTLFISSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ IV + + I I+++++
Sbjct: 240 IISLEPVYAIVIAWLCFNEVPTLKMIIGGLIILLSVA 276
>gi|71736893|ref|YP_276471.1| hypothetical protein PSPPH_4355 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557446|gb|AAZ36657.1| integral membrane protein [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 304
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/301 (12%), Positives = 86/301 (28%), Gaps = 4/301 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + K +G L+ + V + T + +
Sbjct: 58 RYRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVAAMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAMVLFAAASWAFGSVLSKHMPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ + Y P + ++ V + I + +++ A+V+ LP S K
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGIEECMAMVVIISAVVLIGLPQWRRSAVRK 297
Query: 313 T 313
Sbjct: 298 V 298
>gi|15677443|ref|NP_274599.1| hypothetical protein NMB1593 [Neisseria meningitidis MC58]
gi|7226842|gb|AAF41946.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|261392165|emb|CAX49675.1| conserved hypothetical integral membrane protein [Neisseria
meningitidis 8013]
Length = 287
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 82/287 (28%), Gaps = 14/287 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ A + I + + + E++ R+L+S + A V
Sbjct: 1 MLVAAACFTIMNVLIKEASAKFALGSGELVFWRMLFSTVALGAAAVLRRDTFR------- 53
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + YA+ + + + + LKER++
Sbjct: 54 -TPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTLSYTSSIFLAVFSFLILKERISVY 112
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV---L 203
LL ++++ S A + + E
Sbjct: 113 TQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGGAMSGWAYLKVRELSLAGEPGWRVVF 172
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + + ++ + + P ++L G+ + K TV +
Sbjct: 173 YLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCIGVSALIAQLSMTRAYKVGDKFTVASLS 232
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y + +S+ F L + + + I++++ ++ + +
Sbjct: 233 YMTVVFSALSAAFFLGEELFWQEILGMCIIILSGILSSIRPTAFKQR 279
>gi|15804540|ref|NP_290580.1| hypothetical protein Z5498 [Escherichia coli O157:H7 EDL933]
gi|12518858|gb|AAG59144.1|AE005625_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 312
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V +VFL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAAVFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 203 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEXSGIVLIVLALALVS 300
>gi|269119962|ref|YP_003308139.1| hypothetical protein Sterm_1343 [Sebaldella termitidis ATCC 33386]
gi|268613840|gb|ACZ08208.1| protein of unknown function DUF6 transmembrane [Sebaldella
termitidis ATCC 33386]
Length = 294
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 89/285 (31%), Gaps = 13/285 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + W + + T+ L+ S + R + +
Sbjct: 10 YAIITIVFWSLAYVLTRLTLQYFSSFSLGFLRYFIASCALLCIAFITKMKFP------SK 63
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
L+ A ++ F + S PVI+ L E+L+ +Q
Sbjct: 64 KDFPWFLLAGAVGFFIYIITFNKGQESISASTASVVIATVPVITAVLARFIYSEKLSCIQ 123
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA-----YCFARKTIPVGSSEGFFIEMCV 202
A ++ ++ + I+TL GI +++ + + A +
Sbjct: 124 WGAIIIELIGVCILTLLKGIFSINIGLLWLFLAALVLSIYNLIQRRLTKKYTALQTSSFS 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK-LSTVGI 261
+ + V+ S E + I ++ ++ + +S +A+ S V
Sbjct: 184 IFSGTILLAVFMPASLREVLHVPFIQLFYVVLLGVFSSAIAYIAWSKAFSKARQTSDVSN 243
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ P L + FI + + I +++ ++V+ I
Sbjct: 244 YMFVTPFLTSILGFFIANEIPEYSTLIGGAVILFGILVFNFGDKI 288
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 40/133 (30%)
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+T + A + + L + + F
Sbjct: 7 YHPYAIITIVFWSLAYVLTRLTLQYFSSFSLGFLRYFIASCALLCIAFITKMKFPSKKDF 66
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
FL+ + F+ G + ST ++ T P++ V + FI + + ++
Sbjct: 67 PWFLLAGAVGFFIYIITFNKGQESISASTASVVIATVPVITAVLARFIYSEKLSCIQWGA 126
Query: 290 FGIVVIAMVVYLL 302
I +I + + L
Sbjct: 127 IIIELIGVCILTL 139
>gi|253576576|ref|ZP_04853904.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843990|gb|EES72010.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 323
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 91/302 (30%), Gaps = 10/302 (3%)
Query: 8 KEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPG 66
+ + K+ A+ T + L + +WG T L Q + + L R + +
Sbjct: 5 EHPASTFMKKPAANRTRLADLALLFVAFMWGCTFLIVQHAVRVLPPLAFNGIRFIGAALL 64
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
+ I F A + +F +Y + GF+T S +
Sbjct: 65 LALIISMFYRQEWKQLSWRMMGHAALLGLFLFLGYTFQTVGLLYTSTSNAGFITGLSVVI 124
Query: 127 TPVISVFL-----GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY 181
P +S +L + + L S ++ + A+
Sbjct: 125 VPFLSFWLLKHQISRFTWISAILAAAGLYLLAFAGSSGLVLNLGDALVFLCAVGFGLHVA 184
Query: 182 CFARKTIPVGSSEGFFIEMCVL----AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
+ ++M V+ A +L + +S + L+ G
Sbjct: 185 YTGVFAPRYPALPLASLQMAVVGVLSAAGSLLFERTASWSETAGQLMQPEVWLALLVSIG 244
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
++F F I + K S V ++ P+ + V + + + ++ M
Sbjct: 245 PTSAFAFWIQTVCQKFTSPSRVAVIFAMEPVFAAATGVLFGGEQLGWATGLGCLCILGGM 304
Query: 298 VV 299
++
Sbjct: 305 LL 306
>gi|194451330|ref|YP_002047796.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|200387978|ref|ZP_03214590.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205357806|ref|ZP_02573436.2| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205359058|ref|ZP_02666894.2| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|194409634|gb|ACF69853.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|199605076|gb|EDZ03621.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205329451|gb|EDZ16215.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205338880|gb|EDZ25644.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|312914791|dbj|BAJ38765.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|321226823|gb|EFX51873.1| hypothetical protein SEE_00388 [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323132124|gb|ADX19554.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
Length = 315
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 103/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ + +S + R+L++ G+ F G
Sbjct: 18 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVTFSFMHGD 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L+FS F+ + + F++P I V ++
Sbjct: 76 KIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R L + A L ++ ++ H L IA ++A + +
Sbjct: 136 RRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSAALFWGIASAFAAAFYTTWPSRLI 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + ++ G HF + F + S F ++ G
Sbjct: 196 AQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGA 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + S+ +L + +++ ++++ L + +
Sbjct: 256 QLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRAR 313
>gi|89097403|ref|ZP_01170292.1| possible drug/metabolite exporter [Bacillus sp. NRRL B-14911]
gi|89087699|gb|EAR66811.1| possible drug/metabolite exporter [Bacillus sp. NRRL B-14911]
Length = 308
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 96/286 (33%), Gaps = 7/286 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ + A WG++ + ++L ++ ++S R + + + + F
Sbjct: 2 MQGNRILSLWYALLAIAFWGVSFVSVKWLVYYLAPGALVSLRFMIAAIFLGCLLTIFKES 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ K+ + + +L + ++ F + + +FL
Sbjct: 62 FYIKKEHFAHVFILSVLGVFIHQMVQASAMLTLDASAAGWMISFTPVFTSLLSFLFLSEK 121
Query: 138 FLKERLNHLQIIAALLIIL------SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
++ + I ++++ L + G LL + ++K
Sbjct: 122 LSLLKIWGMMIAVTGVLVISAENSGGTLQFSPGLGYFLLLFSTFNWAVYSILSKKFALPY 181
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
SS ++ A + + L L +++ + + +
Sbjct: 182 SSLAVTFWTSLIGCLATLPFLLRNRGYELLYTLPLDGWLHLLFLGIFVSALGYWYWGRAL 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + + V +M Y PL +++++ IL + I +I ++++ +
Sbjct: 242 EVLEATQVSVMMYFEPLFTLLAAILILGEKIPLYSSIGGVLIIMGV 287
>gi|331694547|ref|YP_004330786.1| hypothetical protein Psed_0670 [Pseudonocardia dioxanivorans
CB1190]
gi|326949236|gb|AEA22933.1| protein of unknown function DUF6 transmembrane [Pseudonocardia
dioxanivorans CB1190]
Length = 328
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/298 (10%), Positives = 81/298 (27%), Gaps = 19/298 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G + I +G++ + + L + + VL + G ++
Sbjct: 1 MRARTSSGLGLAVASAISFGLSGPFARAL--IDAGWSSAGAVLVRIGGAAVVLLVLLAVT 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++V+ +A F A+ + ++ PV+ + +
Sbjct: 59 RPGVLAALRADGPALVVYGVLAVAGVQVAFFNAIRYLPVSVALLLEYLGPVLVIAWVWLV 118
Query: 139 LKERLNHLQIIAALLIILSLLIMT--LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ ++ L+ I LL++ G + +A C A + +
Sbjct: 119 RRTPPGRRTVVGGLVAIAGLLLVVQVWSGGALDPAGIAWGLAAAACQASYFLLADRATRT 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV------------- 243
+ + V + T + +
Sbjct: 179 PPTVLAGVGMTIGTAVVAVLGLLGVLPVVVTTTTAEPVVLAGHDVGWPVAATLLVVVSTV 238
Query: 244 --FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I R + ++ + V+S +L + + +++ +V+
Sbjct: 239 VAYLTGVAAITRIGAARGSLVALLEVVASTVASWLLLGELPGPWQLAGGVLILAGIVL 296
Score = 36.4 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%)
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
++ L + V F I+ +S ++EY P+L+I + + P +
Sbjct: 73 LVVYGVLAVAGVQVAFFNAIRYLPVSVALLLEYLGPVLVIAWVWLVRRTPPGRRTVVGGL 132
Query: 292 IVVIAMVVYL 301
+ + +++ +
Sbjct: 133 VAIAGLLLVV 142
>gi|295098277|emb|CBK87367.1| Carboxylate/Amino Acid/Amine Transporter [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 304
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 4/288 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G LF YI+WG T + +E L + R L + + ++ L +
Sbjct: 9 LIGALFSL--YIIWGSTYFVIRIGVESWPPLMMAGIRFLTAGVLLMAFLLLRGHRLPPRR 66
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L +L+ AV + + T S G K
Sbjct: 67 PLLNAALIGLLLLAVGN-GAVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLE 125
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ I +I+L+ + + + I A+ + S + +
Sbjct: 126 WLGIAIGLVGIILLNSGGNLSGNPWAAVLIMIGSMSWAFGSVYGSRIELPSGMMAGAIEM 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
LA + + + + Y I+ +
Sbjct: 186 LAAGIVLLMASALTGEKLTAMPDLSGFLAVGYLALFGSIIAINAYMYLIRNVSPAVATSY 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + T+ + G++V A+V+ L + K
Sbjct: 246 AYVNPVVAVLLGTGFAGEVLSTIEWLALGVIVFAVVLVTLGKYLLPAK 293
>gi|295693784|ref|YP_003602394.1| permease of the drug/metabolite transporter (dmt) superfamily
[Lactobacillus crispatus ST1]
gi|295031890|emb|CBL51369.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus crispatus ST1]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 92/295 (31%), Gaps = 12/295 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L ++ + + R++ S +
Sbjct: 3 TQKQRRLWAFLAGLACVMWGISGLFAKSLFNTSPDITPMWLSQIRMVTSGIILLIVAGVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + FV P +
Sbjct: 63 KQ--KPIATMKNKHDAWTIIAYGIFGLLPVQLFYFIVVQQANASIATILQFVGPFFVMGY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+V K+ + + ++AA+ + ++++ H +L +V + A
Sbjct: 121 LAVTHKQVMRRIDVLAAICAFIGVVLLATHGRFNHFALTPSVLFWGLLSAVGVATNTLIP 180
Query: 195 GFFI------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + H + + F + +
Sbjct: 181 ISVLKRVSSLVVTGWGLLSAGICLMIVHPQMPHIPNTPHVWLDVVAVIVIGTLIPFQLMT 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ K ST +++ P V SV + + I +VV+A + +
Sbjct: 241 NSLRFIKASTASLLDAFEPFSATVGSVICFGLVMTPMDWIGSILVVLAAMALNIS 295
>gi|163744458|ref|ZP_02151818.1| hypothetical protein OIHEL45_02705 [Oceanibulbus indolifex HEL-45]
gi|161381276|gb|EDQ05685.1| hypothetical protein OIHEL45_02705 [Oceanibulbus indolifex HEL-45]
Length = 311
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/310 (12%), Positives = 92/310 (29%), Gaps = 17/310 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + + A ++WG T F VS + + +
Sbjct: 1 MMQGNRWGVIAILFAAVVWGTTGTAATFAPDVSAAAIGAAAMGLGGIAQALWAGRGILQQ 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +G L + LA + + + + P++S + V
Sbjct: 61 RARLWDQRRLLVIGALAVAVYPLAFYGAMRLAGVTVGTV----ITIGSAPLLSALIEYVL 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-------------SAYCFAR 185
RL + A++ ++ + ++ L G+ A A + A
Sbjct: 117 DGRRLTLRWSLGAVVGLIGMGLICLAEGVAHDRGADATSVPLGVLLGLIGGFTYALYSWS 176
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + M ++ G F + L + +
Sbjct: 177 ARKMMLQGTRSSVAMGATFGLGGLMLMPVLLVSGNAFLASWSNAAVGLYMAAVPMFLGYI 236
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
F YG+ R + ST ++ P++ V +V I+ + + + + +V+ + + LP
Sbjct: 237 SFGYGLARVEASTATVITLFEPVVAAVLAVLIVAERLPPLGWVGVALVIGCLAIITLPLP 296
Query: 306 INSGKNKTKK 315
+ +
Sbjct: 297 ARLRRGARAQ 306
>gi|104782120|ref|YP_608618.1| chloramphenicol-sensitive protein rarD [Pseudomonas entomophila
L48]
gi|95111107|emb|CAK15827.1| chloramphenicol-sensitive protein rarD [Pseudomonas entomophila
L48]
Length = 295
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 106/293 (36%), Gaps = 5/293 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS---LL 81
G + A L+ + YT FL + E+ R L +LP + ++ LL
Sbjct: 3 KGIVSSVMASCLFAVMYFYTSFLTPLDGEEIFGWRTLLTLPCLTLFMLVSKDWKRVGELL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + +V ++ ++ V F++A L + S YF+ P+ V G + E
Sbjct: 63 GRVRRTPLLLLGMVGTSWLMGVQLWLFLWAPLHGRSLEVSMGYFLLPLAMVLTGRLVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
RL+ LQ +A L + G + + F + G
Sbjct: 123 RLSRLQKVAVSCAALGVGHELYQHGSFAWETLLVMIGYPIYFVLRRRCRTDHLGGLWCDM 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L +P Y V G L + +++ + + S G+
Sbjct: 183 CLLLPWALYFVIQGPLSAADLAEHPGLYGLIPMLG-AISACALIAYVLASRLLPFSLFGL 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ Y P+L++ ++ + + I + + + + A++V +L + + + +
Sbjct: 242 LSYVEPVLLVGVALLLG-ETIGPDQWLTYLPIWAAVLVLVLEGFKHLLRQRRR 293
>gi|16765326|ref|NP_460941.1| hypothetical protein STM1990 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62180563|ref|YP_216980.1| hypothetical protein SC1993 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167993564|ref|ZP_02574658.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197265005|ref|ZP_03165079.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|204931372|ref|ZP_03222071.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|238912438|ref|ZP_04656275.1| hypothetical protein SentesTe_15075 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16420524|gb|AAL20900.1| putative permease [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|62128196|gb|AAX65899.1| putative permease [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197243260|gb|EDY25880.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|204319855|gb|EDZ05064.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205328442|gb|EDZ15206.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261247155|emb|CBG24978.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267993979|gb|ACY88864.1| hypothetical protein STM14_2412 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158503|emb|CBW18013.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912979|dbj|BAJ36953.1| hypothetical protein STMDT12_C20100 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321224634|gb|EFX49697.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|322616982|gb|EFY13890.1| hypothetical protein SEEM315_16454 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618221|gb|EFY15113.1| hypothetical protein SEEM971_05838 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625892|gb|EFY22711.1| hypothetical protein SEEM973_09627 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626344|gb|EFY23154.1| hypothetical protein SEEM974_06435 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632759|gb|EFY29504.1| hypothetical protein SEEM201_07133 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322639101|gb|EFY35794.1| hypothetical protein SEEM202_10823 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640417|gb|EFY37073.1| hypothetical protein SEEM954_05479 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647222|gb|EFY43721.1| hypothetical protein SEEM054_01637 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648530|gb|EFY44981.1| hypothetical protein SEEM675_22344 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322655538|gb|EFY51846.1| hypothetical protein SEEM965_14753 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660316|gb|EFY56554.1| hypothetical protein SEEM19N_06636 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662997|gb|EFY59204.1| hypothetical protein SEEM801_19522 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668182|gb|EFY64341.1| hypothetical protein SEEM507_21981 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674059|gb|EFY70153.1| hypothetical protein SEEM877_12993 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675589|gb|EFY71663.1| hypothetical protein SEEM867_04147 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683000|gb|EFY79016.1| hypothetical protein SEEM180_10567 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686694|gb|EFY82672.1| hypothetical protein SEEM600_18560 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322715039|gb|EFZ06610.1| Multidrug resistance efflux transporter EmrE [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|323195418|gb|EFZ80598.1| hypothetical protein SEEM581_09469 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198054|gb|EFZ83171.1| hypothetical protein SEEM501_07902 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323204474|gb|EFZ89480.1| hypothetical protein SEEM460_05950 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207564|gb|EFZ92512.1| hypothetical protein SEEM020_07673 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323210997|gb|EFZ95857.1| hypothetical protein SEEM6152_13921 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217549|gb|EGA02268.1| hypothetical protein SEEM0077_21812 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222336|gb|EGA06718.1| hypothetical protein SEEM0047_01457 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226695|gb|EGA10892.1| hypothetical protein SEEM0055_08389 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231571|gb|EGA15684.1| hypothetical protein SEEM0052_15186 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236014|gb|EGA20093.1| hypothetical protein SEEM3312_14154 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240584|gb|EGA24627.1| hypothetical protein SEEM5258_11451 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245476|gb|EGA29476.1| hypothetical protein SEEM1156_17096 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247594|gb|EGA31545.1| putative DMT superfamily transporter inner membrane protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323253943|gb|EGA37767.1| putative DMT superfamily transporter inner membrane protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323257766|gb|EGA41446.1| putative DMT superfamily transporter inner membrane protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323262127|gb|EGA45690.1| hypothetical protein SEEM8284_21379 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266250|gb|EGA49740.1| putative DMT superfamily transporter inner membrane protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323270727|gb|EGA54166.1| putative DMT superfamily transporter inner membrane protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|332988878|gb|AEF07861.1| hypothetical protein STMUK_1968 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 85/288 (29%), Gaps = 4/288 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 63 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 182 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y P++ ++ + + + V G++V A+V+ L +
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYL 289
>gi|46143312|ref|ZP_00204438.1| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|303250223|ref|ZP_07336424.1| hypothetical protein APP6_1639 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307251611|ref|ZP_07533517.1| hypothetical protein appser6_1340 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650934|gb|EFL81089.1| hypothetical protein APP6_1639 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860922|gb|EFM92929.1| hypothetical protein appser6_1340 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 282
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/277 (9%), Positives = 77/277 (27%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V I +G + ++ ++ ++ RV+ +L + ++ L L
Sbjct: 3 KHSLALLKVHFTAIFFGASGIFGALIKS-RPDTLVLGRVMIALVCISLYFIWKKQALVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ +A + + + SF FV + L
Sbjct: 62 TRRELFSQILSGVLLAAHWITFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++A + ++ + L L V + + +
Sbjct: 120 YREGFLLVAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAVVNRKTMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSTTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTLTMLIGGAIILLSVA 276
>gi|307249290|ref|ZP_07531285.1| hypothetical protein appser4_1050 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858689|gb|EFM90750.1| hypothetical protein appser4_1050 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 282
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/277 (9%), Positives = 77/277 (27%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V I +G + ++ ++ ++ RV+ +L + ++ L L
Sbjct: 3 KHSLALLKVHFTAIFFGASGIFGALIKS-RPDTLVLGRVMIALVCISLYFIWKKQALVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ +A + + + SF FV + L
Sbjct: 62 TRRELFSQILSGVLLAAHWVTFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++A + ++ + L L V + + +
Sbjct: 120 YREGFLLVAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAIVNRKNMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSMTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTLTMLIGGAIILLSVA 276
>gi|302541818|ref|ZP_07294160.1| putative integral membrane protein DUF6 [Streptomyces hygroscopicus
ATCC 53653]
gi|302459436|gb|EFL22529.1| putative integral membrane protein DUF6 [Streptomyces
himastatinicus ATCC 53653]
Length = 328
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/292 (9%), Positives = 78/292 (26%), Gaps = 9/292 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +LWG ++ + + + R + A+ + + +
Sbjct: 15 YLLLTTTMVLWGSGFSSSKVVVDHLPHAVAALLRFGGGAVVLLIALRFVPSQQATSGRDV 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFI---YALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
G+L L WG + T ++ +++ + +
Sbjct: 75 GRAAGAGVLGVFLYNLLFFWGLSLAPAMDSTTIIPVMSPVLTTGFLLVTRKERASAGRVA 134
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-----F 197
L + A++ ++ G L + + +A A + G
Sbjct: 135 GLALGLTGAVIFLIGARTDAGAGGDRFLGDVLFLLSAACWAAFTLLGPRVLAGIEPLRAT 194
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L + + + + + G+ +
Sbjct: 195 AYAMSCGAILLGLYSVPSAMDADWGAVPATTWINAVFVAIGPTAVANLFYYRGVGAVGPA 254
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ IM + P + + S L + V+ I +++ V+ + +
Sbjct: 255 SASIMMFMVPAVGTLCSYLFLGETFGAVQAIGAVVLMAGAVLAVTQGRVRPK 306
>gi|95928873|ref|ZP_01311619.1| protein of unknown function DUF6, transmembrane [Desulfuromonas
acetoxidans DSM 684]
gi|95135218|gb|EAT16871.1| protein of unknown function DUF6, transmembrane [Desulfuromonas
acetoxidans DSM 684]
Length = 327
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/301 (9%), Positives = 85/301 (28%), Gaps = 25/301 (8%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS------VLEVISHRVLWSLPGVFFAIV 72
++ +G + + + + + + ++ R+L++LP +
Sbjct: 24 SANSYSLGLWLAVISAFGFSFKAILIKLAYALPQQVPVDAVTLLILRMLFALPF----FL 79
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L +++ A F L L F P++++
Sbjct: 80 LLLRSSGHQGRNLNRKDLAVVIILGAVGYYGASLFDFLGLKYVSAGLERVVLFSFPLLTL 139
Query: 133 FLGSVFLKERLNHLQIIAALLIILS-------------LLIMTLHSGIPLLSLAIAVTWS 179
F ++F ++ + +A ++ + G + A+ +
Sbjct: 140 FFDAIFSGRKIRSYEWLAVVICYCGIGLAFVHDMDVSGVQEEVWVGGGLVFLSALCYAFY 199
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
+ + F + ++ A + + L I
Sbjct: 200 LSG--GRHLIARYGSSRFACLALVVSTAATLLHFAVSHPLSDLVQPWQIYLLAFIMGTFS 257
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++R S ++ P+L I S IL + + ++ +V+ + +
Sbjct: 258 TVMPVLTLAAAVRRIGSSPAALISSLGPVLTIFFSWLILDEAVSLLQMGGTLLVIGGIWL 317
Query: 300 Y 300
Sbjct: 318 V 318
>gi|302339080|ref|YP_003804286.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
gi|301636265|gb|ADK81692.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
Length = 311
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 20/298 (6%)
Query: 28 LFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + I WG T+ + +V+ V R L +L + S
Sbjct: 18 VALIVCTIAWGGIHPATKSLLINKVNPFLVAFLRFLVALLTTLPFFITDSRKRPRPSI-- 75
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + L +S P+ + L +FLKE
Sbjct: 76 --KDTLILSGIGIFGVGFFSLLLSFGLELTNATSSSILINSQPIYAAILSVIFLKENFTL 133
Query: 146 LQIIAALLIILSLLIMTLHSGIP--------------LLSLAIAVTWSAYCFARKTIPVG 191
+ +L + +L + + ++ ++ G
Sbjct: 134 RHLFGIILGSIGILFVATRGTFSSIGIGDDYLIGNVLCILGSLCISVYYVALKNYIRTFG 193
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S FI + L + E +G L L + F +F+ +
Sbjct: 194 SIIPTFISTASGTVVLLVVAIAGKSDFHEVIEMGCTNWMLILFIGVIATGFANIVFNQSL 253
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ P+ ++ SV +L + ++ IV++A+ + S
Sbjct: 254 HAIGVIRATGFKFMVPVFGVILSVLLLGERVNIWVYTGIVIVLVAIYFLQTGNLKKSR 311
>gi|296131881|ref|YP_003639128.1| protein of unknown function DUF6 transmembrane [Thermincola sp. JR]
gi|296030459|gb|ADG81227.1| protein of unknown function DUF6 transmembrane [Thermincola potens
JR]
Length = 310
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 92/292 (31%), Gaps = 16/292 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F ++WG T + + L R L + + A+ +
Sbjct: 4 VFFAAL-CLIWGSTWMAIKINLGSFPPFFSAGLRFLLAGFVLLAAMKFAKVSFP------ 56
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + +G + LT+ P S+ ++F+ ER+
Sbjct: 57 GEWRKLSPSFVFGLLNGISYGLIYWGEQYIPSGLTAVLNASLPFFSIIFAAMFIGERITL 116
Query: 146 LQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
++ +++ +L++ + +++ +A A
Sbjct: 117 RKVFGSIIGFAGVLLLFYESLSELSSGKIMGEIAIVVAAAVYALAGVHVKKRSSVEPLAA 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + +L A+ +V G F+ ++ F ++++ I R +++
Sbjct: 177 VTVQMLTAAAVLLLVALPVEYGAAVHFTWRGLVAFMYLSLFGSAVAFYLYNHLILRMEVT 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P + + V I+++ ++ I ++ + + S
Sbjct: 237 ALSYTSLITPAIATLLGVLIMEEELNGFMIIGMILIFTGTAIINIKGAHRSR 288
>gi|168462469|ref|ZP_02696400.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|194443963|ref|YP_002041254.1| hypothetical protein SNSL254_A2153 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|207856498|ref|YP_002243149.1| hypothetical protein SEN1020 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|194402626|gb|ACF62848.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|195634522|gb|EDX52874.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|206708301|emb|CAR32604.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 63 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKA 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 182 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + V G++V A+V+ L + +
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPAR 293
>gi|330969508|gb|EGH69574.1| putative DMT superfamily transporter inner membrane protein
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 304
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 85/296 (28%), Gaps = 4/296 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F G + K +G L+ + V + T + +
Sbjct: 58 RFRGVPAPTWREWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAAIVLGLIGIGLLNLGSNLQASPYGAAVVIFAAAAWAFGSVLSKHLPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLAHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + Y P + ++ V + I + +++ A+V+ LP S
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRS 293
>gi|326938593|gb|AEA14489.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 303
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGDFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 285
Score = 36.0 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|296501564|ref|YP_003663264.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
gi|296322616|gb|ADH05544.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
Length = 303
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + + R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTNLRWMIAIVCLLPMVWF-----KEKKILPPRTAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFSLLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVSNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + +VV ++
Sbjct: 251 PIFTAILAFIFLGEELTWIQILGTIVVVTGCYLFS 285
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WMIAIVCLLPMVWFKEKKILPPRTAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|258655391|ref|YP_003204547.1| hypothetical protein Namu_5292 [Nakamurella multipartita DSM 44233]
gi|258558616|gb|ACV81558.1| protein of unknown function DUF6 transmembrane [Nakamurella
multipartita DSM 44233]
Length = 341
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/309 (11%), Positives = 90/309 (29%), Gaps = 23/309 (7%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV---SVLEVISHRVLWSLPGVFFAIV 72
+ S G L +G + + + L V + + ++ + +IV
Sbjct: 23 TPSLSHRPRFGLLLALLTAAAFGTSGAFARSLIDAGWTPAAAVTARVSIAAVVLLVPSIV 82
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G S+L+ + F +A + A+ + ++ V+ V
Sbjct: 83 ALRGRWSVLR-----RNLPMITAFGLIAIAGCQVAYFNAVQHLSVAVALLLEYMGIVLVV 137
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMT-LHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
V ++R L + ++ IL L ++ L + + + A +
Sbjct: 138 GWLWVRHRQRPRRLTVGGTVVSILGLALVLDLVGDATVDLVGVLWGLVAAIGLAVFFVMS 197
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN--------------IPDTLFLIGYG 237
+ + V+A + + G L L
Sbjct: 198 AKSDPELPPIVMAGGGMVIGAIALLALGAVGLLPLAATTADVVFAGQDVPWWVPILGLSL 257
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
L F + + + + T L ++ + +L Q V+ + ++V +
Sbjct: 258 LAAVFAYVVGIMAARALGSKLASFVGLTEVLFAVLFAWLLLGQLPTVVQLLGGALIVAGV 317
Query: 298 VVYLLPTVI 306
+ + +
Sbjct: 318 AMVRIDELR 326
>gi|256849503|ref|ZP_05554935.1| permease [Lactobacillus crispatus MV-1A-US]
gi|293381364|ref|ZP_06627365.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|312983990|ref|ZP_07791339.1| DMT permease [Lactobacillus crispatus CTV-05]
gi|256713619|gb|EEU28608.1| permease [Lactobacillus crispatus MV-1A-US]
gi|290922054|gb|EFD99055.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
gi|310894667|gb|EFQ43740.1| DMT permease [Lactobacillus crispatus CTV-05]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 93/295 (31%), Gaps = 12/295 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++WGI+ L+ + L +++ + + R++ S +
Sbjct: 3 TQKQRRLWAFLAGLACVMWGISGLFAKSLFNTSPEITPMWLSQIRMVTSGIILLIVAAVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + FV P +
Sbjct: 63 KQ--KPIATMKNKHDAWTIIAYGIFGLLPVQLFYFIVVQQANASIATILQFVGPFFVMGY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+V K+ + + ++AA+ + ++++ H +L +V + A
Sbjct: 121 LAVTHKQVMRRIDVLAAICAFIGVVLLATHGRFNHFALTPSVLFWGLLSAVGVATNTLIP 180
Query: 195 GFFI------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + H + + F + +
Sbjct: 181 ISVLKRVSSLVVTGWGLLSAGICLMIVHPQMPHIPNTPHIWLDVVAVIVIGTLIPFQLMT 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ K ST +++ P V SV + + I +VV+A + +
Sbjct: 241 NSLRFIKASTASLLDAFEPFSATVGSVICFGLVMTPMDWIGSILVVLAAMALNIS 295
>gi|227534293|ref|ZP_03964342.1| DMT superfamily drug/metabolite transporter [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227188085|gb|EEI68152.1| DMT superfamily drug/metabolite transporter [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 336
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 85/294 (28%), Gaps = 10/294 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G F I WG + ++TQ L V L ++ R+ ++ +
Sbjct: 23 HTNQKLKGVSFAVIGAIFWGASGIFTQTLFTDAGVKPLWLVGIRLFFAGLLLLLWS-GVQ 81
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L A+ M+VF+ + + A+ + F+ PV +
Sbjct: 82 EPRMFLAIWKNRHDAILMIVFAFLGMVPSQLTYFLAINAGNAATATILQFLGPVFILLYV 141
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + + ++ L ++ ++ + LSLA A +
Sbjct: 142 AFATHQMPRRIDFVSITLALIGTYLLVTRGHLTGLSLAPAAVFWGIMAGVSQALYTLLPR 201
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY------ 249
+ + ++ + L P + VF
Sbjct: 202 TLLAKYDARAVTGWSMLLGSLPFLPQYVLHPNPLLTLPDFGAIAFVIVFGTMFAYLLVLG 261
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ G++ PL +V L + ++++ ++ LP
Sbjct: 262 SLNYIPPVATGMLSAFEPLTATTLAVTRLHIAFGPAEWLGGILIILNTLLQALP 315
>gi|224059909|ref|XP_002196939.1| PREDICTED: transmembrane protein 22 [Taeniopygia guttata]
Length = 409
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/300 (9%), Positives = 92/300 (30%), Gaps = 22/300 (7%)
Query: 30 VFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F + + G L T+ + V LE+I R + + + + +
Sbjct: 105 LFGSAVAHGCVALITRLISDRSKVPSLELIFIRSVLQVLSLIAVC--YHHEPPFGPKGYR 162
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +I + F I + T V S L + + E L ++
Sbjct: 163 LRLFLYGICNVISITCAYTSFSIVPPSNGTIMWRAT----TTVFSAILAFLLMDEGLAYI 218
Query: 147 QIIAALLIILSLLIMTLHS-------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ + + + ++ + + ++ + + + +
Sbjct: 219 DILTVIGSVFGVCLVMIPNIVKEENSLLSTWKEAFGYTMTVMAGLTTALSMIIYRSIKDN 278
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + F E + +L+ L ++ F + + +
Sbjct: 279 ISMWTALFTFSWTGTVWGASTMFLLQEPIVPLDGETWSYLLAICLCSTAAFLGVYHALGK 338
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ V +++ ++ +V + +L T + ++++++ + +
Sbjct: 339 FHPALVSTVQHLEIVIAMVLQLLVLHSFPGTCDLVGAVLILVSVFFLACYKLSLKELRRQ 398
>gi|223041725|ref|ZP_03611919.1| hypothetical protein AM202_0332 [Actinobacillus minor 202]
gi|223017463|gb|EEF15880.1| hypothetical protein AM202_0332 [Actinobacillus minor 202]
Length = 282
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/278 (10%), Positives = 80/278 (28%), Gaps = 3/278 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ L V +L+G + ++ ++ S ++ RV + + ++ L
Sbjct: 2 NKHTLALLKVHSTAVLFGASGIFGALIQS-SADTLVLGRVWIAFFMISLYFIWKKQPLVS 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L A+ + +A + + + SF FV +F
Sbjct: 61 LSKKEIGQLALSGALLAAHWVTFFVAVKVGGVALATLGFASFPAFVALFEVIFFKEKLHL 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + ++A + ++ + L V + + S +
Sbjct: 121 KEIIL--LVAITIGLILVTPEFTLGSEGTQGLLWGVFSALSYGILAIVNRKSMSKLSGKQ 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ FS + + + L + + +F + T
Sbjct: 179 ASWWQYLFAGLILLPFSAEKLLVVSAVDWFWIFCIGFLCTTVAYTLFVSSLDTINARTAS 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ P+ I + + I I+++++
Sbjct: 239 MIISLEPVYAIAIAWICFNEVPTLTMFIGGAIILLSVA 276
>gi|153955998|ref|YP_001396763.1| hypothetical protein CKL_3389 [Clostridium kluyveri DSM 555]
gi|146348856|gb|EDK35392.1| Hypothetical protein CKL_3389 [Clostridium kluyveri DSM 555]
Length = 295
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 93/293 (31%), Gaps = 10/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G+L +F A +WG + +++ LE VS + ++ R + +F + F
Sbjct: 2 KEKLIGSLCLFLAASIWGSMYVLSKYILEFVSPITLLWVRYAIAFVVLFVILRAF-QHKK 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K +K + + + + TPV V L
Sbjct: 61 RRKVVIKKGDWLLIAWIGFIGYFISIFMQFLGTQLSDAHTGALITASTPVFVVLFARFIL 120
Query: 140 KERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVG 191
KE ++I+ +L L ++I+ G +L A + +
Sbjct: 121 KEAFTRKKMISLVLATLGVVIVIGLDTMFLKHFLGNIVLVGAAVTWALLSVYVKVASKRF 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S + A+ ++ L + + F +++ GI
Sbjct: 181 DSLIITTYAMLFALIFTTPLMLLQHENISFILYNRQFLLGILYLGVISTAAAFFLWNKGI 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + P+ + L + ++T I +++IA+ +
Sbjct: 241 ELMDAGMGSLFLFFQPVTGSILGWLCLGEQLNTGFFIGGILIIIAVFIASKDE 293
>gi|21244395|ref|NP_643977.1| hypothetical protein XAC3670 [Xanthomonas axonopodis pv. citri str.
306]
gi|21110055|gb|AAM38513.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 298
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 100/296 (33%), Gaps = 9/296 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + ++ A + + + L L+V R SLP V + +G
Sbjct: 2 PTTRSPLPAIAWMVAAVACFSLMDAGMKLLSAHYPPLQVTLLRGGASLPFVLVWVFATAG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+++ P G+ + + V G F++ + T YFV P++ L
Sbjct: 62 PRAIV------PVRWGLHLLRGVLGMVMIGCFVFGIKRMPLSTTYTLYFVAPLLVAALSV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L E + + A + ++ ++++ + + V +A +A + V
Sbjct: 116 PLLGEHVGPRRWTAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAATAYAVAAVTVSLLTR 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ LF + G + + G GL + + R +
Sbjct: 176 TDTPQAMVVWFLLFMAIGAGLLAIPGWVPLQAGHAGLIAGMGLAGALGQVALTQAFMRGE 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
S + +EYT + +I + + D+ GI+V + + + + +
Sbjct: 236 ASMIAPLEYTGLVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRRERIRQADR 291
>gi|85704701|ref|ZP_01035803.1| hypothetical protein ROS217_06464 [Roseovarius sp. 217]
gi|85671109|gb|EAQ25968.1| hypothetical protein ROS217_06464 [Roseovarius sp. 217]
Length = 348
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/313 (11%), Positives = 92/313 (29%), Gaps = 21/313 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFF---------- 69
+ M+G + A +++ + L + + R + + + F
Sbjct: 12 ASKVMLGATLAWVAVLIYASSNSLVSLLADIGAQNRVMGRNVITYCNLLFVGSLMSMVPM 71
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
++++ L V + + + A+ G F YAL + P
Sbjct: 72 LLMFWRDWTWDNLRALGRKHWVILTLSAFFSSALTPGLFFYALEHTTVTNVVLMGRIEPP 131
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----------AIAVTW 178
+ + + L+E +A L+ + ++M L + + ++
Sbjct: 132 LFLLAAWLILREEFEPWSFVAGLVALAGAVVMILMNNQGTAFMLGKGEIGALLATLSYIA 191
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
S + V F ++ + I +
Sbjct: 192 STLIARTGLRGIPMGIFAIYRTAVGTTFYFFLALYLFGPDHFEDVFHPVVWQWVWIYAVI 251
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ ++ G+K A+ V + +PL I+ ++ +L + I++ A+
Sbjct: 252 VVIGGQFAWALGLKYARSGDVSLATSFSPLAAILIAMLMLGEDPGPGLIPGGAIILAAVG 311
Query: 299 VYLLPTVINSGKN 311
+ + +
Sbjct: 312 IGQYGRLRRRHRE 324
>gi|255536624|ref|YP_003096995.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Flavobacteriaceae bacterium 3519-10]
gi|255342820|gb|ACU08933.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Flavobacteriaceae bacterium 3519-10]
Length = 294
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 87/286 (30%), Gaps = 21/286 (7%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++WG + + + LE + EV + RVL + + +
Sbjct: 9 VLLIGLTVIWGSSFILIKKSLEHFNPYEVGALRVLIAGLILLPFALMNIKKFP------- 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+++ + T V F A + + P+ + +G++ K +
Sbjct: 62 RKNVKWLILAAVTGNFVPMFLFPIAETAVSSSIAGIVNSMMPIFVIIVGALMWKFQTTKR 121
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSL------------AIAVTWSAYCFARKTIPVGSSE 194
QII ++ I+ G AV+ + IP
Sbjct: 122 QIIGVVISFSGACILAFSGGEGGEFKLVPVLLLLLATLCYAVSTTTVKSKLNHIPAKILS 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F ++ A+ V+ F+ E+ + + + +
Sbjct: 182 AFVFSFVLIIPSAVSLVLAGFFNDLENDQNLWAGLGFVSLLSIFGTGLAMMLNYRLLSIS 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P++ I+ V I + + ++ I I++ ++
Sbjct: 242 TPLFASTVTLLMPVVAIIWGV-IDGETLTPIQCIGAVIILAGLIFL 286
>gi|218281304|ref|ZP_03487792.1| hypothetical protein EUBIFOR_00357 [Eubacterium biforme DSM 3989]
gi|218217489|gb|EEC91027.1| hypothetical protein EUBIFOR_00357 [Eubacterium biforme DSM 3989]
Length = 289
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 72/291 (24%), Gaps = 4/291 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L +WG + T L+ V+ R + + + +S
Sbjct: 1 MSKKQANLVCLIVAAIWGGGFIATDAALQTFDPFTVLMIRFIGASLVSIVVCLCSHVKVS 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ V M + A ++ ++
Sbjct: 61 KQALFRGSISGVLMYLAFAFQTFGLAMTNTGQNAFLTAVNVVLVPYIVWLL---WKKKPS 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K +L I + LSL I + A +S I
Sbjct: 118 KRQLGASVICLVGIACLSLSKGYFQFSFGDCLSLICALFFACHIISLEYATENSNSIAIN 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+++ AL + + + + F + + K S+
Sbjct: 178 AVQMSVAALLSIPFALSLETIPQNISMHAYMSCGYMIVVATFLAFQLQTLAQKYTDASSA 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ T L V +L + + + ++ ++++ K
Sbjct: 238 SVLLCTESLFANVFGFVLLHEAKSPIMILGGLLIFFSVILTEYSGQFVLSK 288
>gi|114769599|ref|ZP_01447209.1| hypothetical protein OM2255_08531 [alpha proteobacterium HTCC2255]
gi|114549304|gb|EAU52186.1| hypothetical protein OM2255_08531 [alpha proteobacterium HTCC2255]
gi|297184272|gb|ADI20390.1| permeases of the drug/metabolite transporter (dmt) superfamily
[uncultured alpha proteobacterium EB080_L27A02]
Length = 290
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 90/288 (31%), Gaps = 5/288 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+G + + ++ + +++L +V ++ R + V F G +
Sbjct: 3 QSNLRLGIILMIATTFVFAMQDGISRYLAGEYNVFMIVMIRYWFFAAFVIFWAKANVGSI 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ILAV + + + + + P+I L
Sbjct: 63 KKA----ASTHQPILQCLRGIILAVEICIMVLGFVLIGLIESLAIFTIYPLIIAALSGPI 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ER+ + +A + ++I+ AI SA FA +
Sbjct: 119 LGERVGWRRSVAICIGFFGIIIILQPGYSVFSVYAIFPLCSAILFALYGLLTRYVARQDS 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +V G + N D +++ + +F + + A+ S
Sbjct: 179 AATSFFWTGIAGLVVTTLVGIFFWETMNSKDWMWMCLLCVTGAFGHFLLIKCYEVAEASG 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
V Y + ++ + + + I IV++A + L I
Sbjct: 239 VQPFAYLQLVFGSALAMIVFGESLKLSTAIGSSIVILAGLYTLWREKI 286
>gi|56697277|ref|YP_167643.1| hypothetical protein SPO2426 [Ruegeria pomeroyi DSS-3]
gi|56679014|gb|AAV95680.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 295
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 86/291 (29%), Gaps = 10/291 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + A +L+ ++L V VL+++ R L L
Sbjct: 12 GVVLMSLAAVLFTCIDTSAKWLAGAGVPVLQIVFARYLGHFLYGLAY------YLPTEGT 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+A G + + L AL +T+ F P++ L L ER+
Sbjct: 66 ATFRSQAPGRQILRSFFLLGSTVLNFQALKYLPITVTATIAFAGPIVITLLAIPILGERV 125
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE-MCV 202
+I+A L +LI+ + + G
Sbjct: 126 GIRRIVAVCTGFLGVLIVVQPWSAAFHPAMFYSLGGLGMASMYFVMTRLLTGIESTATQQ 185
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L +V F+ + D L L G + + A S + +
Sbjct: 186 IWASGLATLVLAPFALRVAIWPEAGLDWLVLCTIGAFGLCGHVAATTAHRWADASILAPL 245
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
Y+ ++ V + I++ + +Y+ G+++T
Sbjct: 246 IYSQIFWAALAGVIVFNTWPTVWTLGGGAIIIAS-GLYIWHRESAGGRHRT 295
>gi|16760932|ref|NP_456549.1| hypothetical protein STY2198 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141376|ref|NP_804718.1| hypothetical protein t0888 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161613442|ref|YP_001587407.1| hypothetical protein SPAB_01158 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|213053047|ref|ZP_03345925.1| hypothetical protein Salmoneentericaenterica_09088 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424984|ref|ZP_03357734.1| hypothetical protein SentesTyphi_04365 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213853124|ref|ZP_03382656.1| hypothetical protein SentesT_09866 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289829481|ref|ZP_06547093.1| hypothetical protein Salmonellentericaenterica_23188 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25528237|pir||AF0754 probable membrane protein STY2198 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503229|emb|CAD05737.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137003|gb|AAO68567.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161362806|gb|ABX66574.1| hypothetical protein SPAB_01158 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 63 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 182 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + V G++V A+V+ L + +
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYLFPAR 293
>gi|307245956|ref|ZP_07528039.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306853175|gb|EFM85397.1| Predicted permease [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
Length = 280
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 107/281 (38%), Gaps = 6/281 (2%)
Query: 33 AYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK---NPK 89
A L+G+ + L ++ + +R++ P + AI+ F + K NP
Sbjct: 3 ANFLFGLGYYFAILLRPLNGESMFGYRIVVLAPFILLAILLFKQTNKFQQLWQKIKQNPL 62
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V +L+ A + F++A Q S Y + P+++V LG + KE L+ +
Sbjct: 63 LVLVLLLLALNTGIQLWLFLWAPNNGQAIEVSIGYLLLPIVAVALGKIVFKEHFTLLKWL 122
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+ ++ + +G + +A + L + F
Sbjct: 123 SLCCAVIGVASNIWLTGSFSWATIVAGVGYPLYITLRRYFE--INTLATFFVELLLVMPF 180
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ + + N FL +GL+N F ++ ++ +G++ Y PL+
Sbjct: 181 AGYFIAQTDMQPILADNQYIYYFLALFGLVNGAAFILYIASSNLLPVNVLGLLGYVEPLV 240
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
M+ S I + +D+ ++ + +A+++ + + +
Sbjct: 241 MLCVSFMI-GEVLDSKSYLLMICLALAIILLTVDNFRLTRR 280
>gi|307727101|ref|YP_003910314.1| hypothetical protein BC1003_5102 [Burkholderia sp. CCGE1003]
gi|307587626|gb|ADN61023.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1003]
Length = 301
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 90/302 (29%), Gaps = 16/302 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + A + G T + ++ + + + R + P + +
Sbjct: 2 NSRYVGYVCCALAMLGVGSTVVVSKSIAAGLPPFSATALRFAIAFPLFVLVMHWRGVRWP 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L A ++ +A + I + P +S + + L
Sbjct: 62 RLD----RRDAALVIAQAAAGSVGYTVLLISGMKLASAGDAGVIAGTLPAVSAVVAMLAL 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-----------AIAVTWSAYCFARKTI 188
ER + + A +L +L+ T+ SG + AV A
Sbjct: 118 GERPSPALLGAIVLATAGVLVCTVRSGAGVAPHEGGSLPGNLLVFAAVVCEALFILLNRR 177
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I +V F L + + F ++
Sbjct: 178 LRTPVAPLPLSALMCGIGFAVCIVPACFEKPWSLPLDAAAIAGVIYYALVPTVAGFVLWY 237
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
G R + G+M P+ + + +L++P+ T + + V+ A+++ +
Sbjct: 238 EGAARVSGAEAGLMTALVPVSALALAALLLREPVSTAQLVGVACVLAAVMLATFGQTFGA 297
Query: 309 GK 310
+
Sbjct: 298 RR 299
>gi|254197913|ref|ZP_04904335.1| integral membrane protein [Burkholderia pseudomallei S13]
gi|169654654|gb|EDS87347.1| integral membrane protein [Burkholderia pseudomallei S13]
Length = 353
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 21/299 (7%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+EN TL + +WG+ + L + V ++ S+ F ++
Sbjct: 40 QENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVAS-AATSIVACAFVLIVRR 98
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++ ++ +L V F++ + + +++TP +
Sbjct: 99 KSIATVRRHW-------LLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYA 151
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKT 187
L+ERL A L + ++M S + A A
Sbjct: 152 HFILRERLTAAGAAFAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVV 211
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP-----DTLFLIGYGLLNSF 242
EM + A + + E L ++G G+ +
Sbjct: 212 KASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAA 271
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +G+ R + I+ ++ +++ + +V+A ++
Sbjct: 272 NNMLVQHGLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSS 330
Score = 36.8 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 36/136 (26%), Gaps = 1/136 (0%)
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
+A+ A + P+ + V +
Sbjct: 49 WPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHW 108
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
L + F +G ++ V ++ Y P + + FIL++ +
Sbjct: 109 LLPALG-VAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYAHFILRERLTAAGAAFA 167
Query: 291 GIVVIAMVVYLLPTVI 306
+ + V+ L +
Sbjct: 168 ALSLGGAVLMLWSPRL 183
>gi|167567854|ref|ZP_02360770.1| hypothetical protein BoklE_35218 [Burkholderia oklahomensis EO147]
gi|167574828|ref|ZP_02367702.1| hypothetical protein BoklC_33655 [Burkholderia oklahomensis C6786]
Length = 307
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 92/288 (31%), Gaps = 9/288 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL-EVISHRVLWSLPGVFFAIVYF 74
++ P + G L + + L + L E+I R L + +
Sbjct: 8 RDTERNPILSGALAYALGIFCMALVDASGKHLSRAYPLAEIIFFRSLLATVPLGITA--- 64
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
S + + V + GFF ++L + +P+ +
Sbjct: 65 ----SRAGWGTLRTRRPLLHVVRGLTVLFTLGFFFWSLRYLPLADATALNLTSPIFTTLF 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ FL E + +A + + + ++ + L +A+ SA +A I
Sbjct: 121 AAWFLAEAIPRRYWLALAIGLTGVWLVMAPTDATLRGVALIAVASAAAYAGTNIATRILV 180
Query: 195 GFFIEMCVLAIPALFYVVWNGF-SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+C +V + + + L DTL + + ++ + + Y +KR
Sbjct: 181 RTDSALCCTFHSNTVLLVVTALGAFAQDWLLFTWRDTLVVFVMAIASTALQMLAGYALKR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + ++YT + + + + +V + V +
Sbjct: 241 VPASRLAPLDYTLLIWTVGLGALVWHEWPKPAVWAGMALVCASCWVIV 288
>gi|295704526|ref|YP_003597601.1| drug/metabolite exporter family transporter [Bacillus megaterium
DSM 319]
gi|294802185|gb|ADF39251.1| transporter, drug/metabolite exporter family [Bacillus megaterium
DSM 319]
Length = 299
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 71/280 (25%), Gaps = 13/280 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LW Q LE S + R+ + + + L +KD
Sbjct: 8 VFLHILMISLWASAFPVIQIGLESFSPQHLAFVRLSIASLVLLVIAIATRMRLPDIKD-- 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L V+ T + S TP+ S L +E
Sbjct: 66 ----IPLLLALGFLGFTVYHMALNIGEKTVSAGIASLLVSTTPIFSSLLAIFLFQEECGK 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSA------YCFARKTIPVGSSEGFFIE 199
+ I + + + ++TL + S+ + + +
Sbjct: 122 RKWIGSAVSFAGIALLTLSKENFVHSVNGILLILLAALAESIYIVCQKNLLKKYGFLSFV 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + +V+ E + + + +Y R
Sbjct: 182 TYSIWGATISMLVFLPGLETELAHISVRSAISVTYLGLFPTVIPYMVLAYLTSRIGSVEA 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I Y P L + +LK + I + +++
Sbjct: 242 AISLYLTPALSFFLAWLLLKDIPSATSIVGSIITLCGVLL 281
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 42/133 (31%), Gaps = 2/133 (1%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+ ++ A F I + S + L+I +L +V + L
Sbjct: 11 HILMISLWASAFPVIQIGLESFSPQHLAFVRLSIASLVLLVIAIATRMRL--PDIKDIPL 68
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
L L + + G K ++ T P+ + ++F+ ++ + I
Sbjct: 69 LLALGFLGFTVYHMALNIGEKTVSAGIASLLVSTTPIFSSLLAIFLFQEECGKRKWIGSA 128
Query: 292 IVVIAMVVYLLPT 304
+ + + L
Sbjct: 129 VSFAGIALLTLSK 141
>gi|262371340|ref|ZP_06064658.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262313677|gb|EEY94726.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/302 (11%), Positives = 91/302 (30%), Gaps = 13/302 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+ A ++W I + T+++ +S + + +R ++ + +V
Sbjct: 1 MSTTTQRMYWALSLPIIAVLIWSINIVVTRYVADFISPVSISFYRWFFAFILLTPFVVRP 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + V SA L ++ G A P+ ++F+
Sbjct: 61 LCRQWALIRVH----LGQLAVLSAFGLVLYQGLAYTAAHYTTATNMGLINAFIPIFTIFV 116
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARK 186
+ LK+ N +I ++L L+ + G L + + V Y F
Sbjct: 117 SLLILKDIPNRFAMIGSILSFAGLVYIIGQGNLAGLVQSGGHLGDVLMVVAVFFYAFYGV 176
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + I + + + + + +
Sbjct: 177 FLKKWQLQIPLMLSLYVQIFFALLYHLPFIAYFGLDSINSQNAASVMYASIFPSLVAPLL 236
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ I + I P+ V + LK+ T+ +++ +++ T +
Sbjct: 237 WMLAITHLGPNRTSIFMNLMPVFTAVIAYVWLKEAWTVYHTVGGVVIICGILLAQRKTAL 296
Query: 307 NS 308
+
Sbjct: 297 KT 298
>gi|229102291|ref|ZP_04233000.1| Transporter, EamA [Bacillus cereus Rock3-28]
gi|228681192|gb|EEL35360.1| Transporter, EamA [Bacillus cereus Rock3-28]
Length = 303
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 89/299 (29%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGLRFLFAGIILLFVQMIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDI----KQSSFAGLIVGFFLCVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----- 194
K++ ++ + L ++T L I V A FA + G
Sbjct: 120 KQKATISVVLGITVATAGLYLLTAADSFQLNIGDILVLGCAIAFAAHILINGFYSKKISP 179
Query: 195 -----GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLTVGIFSSICAFLFEDWENLFSISLWTNHSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSMSAIFGCLCIFLGMIFVELPSKTKK 298
>gi|254503937|ref|ZP_05116088.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222440008|gb|EEE46687.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 345
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 83/302 (27%), Gaps = 19/302 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G + I++ + + V + E++ R + + V +
Sbjct: 32 TRQAPLIGIGLKLASTIVFFAMVTVLKIAAERVPIGELVFARNFFGVFPVLMMVGVRGEL 91
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + A I A + F TP+I V L
Sbjct: 92 GLAFQTQNPKGHLLR-----ACIGLTAMVCMFTAYDLLPLPDATAINFATPLIVVVLAFF 146
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-------------SGIPLLSLAIAVTWSAYCFA 184
L E + + A + +L++ + A +
Sbjct: 147 MLGETVRIYRWSAVAVGFAGILVVLSPHLGEGDFDNSATFGAVVGFMGAAFAALAMITVR 206
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
R + +S + +L + + + + ++ L+ GL
Sbjct: 207 RLCVTERTSTIVTWFSLSATVISLLTIPAGWIWPDQAWIIPDMETAALLVMIGLFGGVGQ 266
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + A ST+ +Y L I+ + + + IV+ A + +
Sbjct: 267 ILLTQSYRYADASTIAPFDYVNMLWAILVGWVVFAEVPVLEVIVGAVIVMAAGIFVIYRE 326
Query: 305 VI 306
Sbjct: 327 HR 328
>gi|163795310|ref|ZP_02189277.1| hypothetical protein BAL199_14367 [alpha proteobacterium BAL199]
gi|159179296|gb|EDP63827.1| hypothetical protein BAL199_14367 [alpha proteobacterium BAL199]
Length = 278
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 88/282 (31%), Gaps = 9/282 (3%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A++L+ + L ++ L+++ R + V ++ G L LK
Sbjct: 1 MCVAFLLFTFLDTSAKLLAQEMGSLQIVWARFVGHAVLVAAILLPRKGTRVLASSNLK-- 58
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + L + F +AL T+ F P++ L L E++ +
Sbjct: 59 ----LQILRSVFLFLSTVFNFFALRYLHLATTASIMFTVPLLVAALSVPMLSEQVGWRRW 114
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE-MCVLAIPA 207
A + + +LI+ +G L ++A A I L P
Sbjct: 115 TAIAVGFVGVLIIVRPTGATLHWAIGLSLFNAVSVALYQITTRKLAARDHSDTTSLYSPL 174
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
++ + L GL + + A S + YT
Sbjct: 175 FGAIILLPLLPFIWETPSGPLAWVLLCAMGLFGGIGHWLLIIAHRYAPASLLAPFSYTGI 234
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINS 308
L M S + D + +V+ + V+ V +
Sbjct: 235 LWMTTSGFLVFGHLPDEWTVVGAAVVIASGLYVFHRERVRKT 276
>gi|330895530|gb|EGH27840.1| putative DMT superfamily transporter inner membrane protein
[Pseudomonas syringae pv. japonica str. M301072PT]
Length = 304
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 85/296 (28%), Gaps = 4/296 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R L + + + +
Sbjct: 1 MPQSVRVSPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFLIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F G + K +G L+ + V + T + +
Sbjct: 58 RFRGVPAPTWAEWKAAFVIGFLLLACGNGGVTLAEHAGVASGVAALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQASPYGAAVVIFAAAAWAFGSVLSKHLPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ A + L + F + Y +K
Sbjct: 178 KGPMASAAEMITAGATLLIGSALSGERLTHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + Y P + ++ V + I + +++ A+V+ LP S
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGETIGVEECMAMVVIISAVVLIGLPQWRRS 293
>gi|325917107|ref|ZP_08179340.1| putative permease, DMT superfamily [Xanthomonas vesicatoria ATCC
35937]
gi|325536683|gb|EGD08446.1| putative permease, DMT superfamily [Xanthomonas vesicatoria ATCC
35937]
Length = 295
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/272 (9%), Positives = 79/272 (29%), Gaps = 13/272 (4%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
I+WG + L+ + + ++ R+ + + L +
Sbjct: 26 GIVWGCSFLFMRVAAPKFGTVALVEIRLALGAAVLLPFLWLARDRFPLRR-------WPM 78
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ A+ + F +A + + +T + + + +F ER+ + +A L
Sbjct: 79 LAAIGVLNSALPFLLFAWAAQRAPAAVGAICNAMTVLFTALIAFLFFGERIGTRRALALL 138
Query: 153 LIILSLLIMTLHSGIPLLSLAIA-----VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ + +L++ L A + +
Sbjct: 139 VGFIGVLVLATGKSAGLSVGPAALAGATASLLYGIGYNLVKRHMGDLPPAASAASTLGCS 198
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + + + + F ++ I+R + + Y P
Sbjct: 199 ALLLAPLAWLQWPTTPVPAVAWACATALGVVCTGLAFLMYYRLIQRIGPARASTVTYLVP 258
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + +L +P+ + +++ ++
Sbjct: 259 VFGALLAWSLLGEPLTWTMLLAAALILGSVAF 290
>gi|288959545|ref|YP_003449886.1| hypothetical protein AZL_027040 [Azospirillum sp. B510]
gi|288911853|dbj|BAI73342.1| hypothetical protein AZL_027040 [Azospirillum sp. B510]
Length = 348
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/280 (11%), Positives = 81/280 (28%), Gaps = 6/280 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G+ A +L+G++ + L +S + L S G+ + S ++
Sbjct: 5 GSTMAILAAVLFGVSTPLAKLLVHDLSPWMLAGLLYLGSGIGLGLVRLARGLSASPERNE 64
Query: 85 LKNPKAVGMLVFSATI--LAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +A ++ L S + V++ L +E
Sbjct: 65 RSIHGIEWFWLLAAVFAGGVAGPVLLMFGLTATPSSTASLLLNLEGVLTALLAWFVFQEG 124
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPL---LSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + I++ ++++ + + A + S ++
Sbjct: 125 FDRRLVAGMAAIVVGAVVLSWGGAVDIAAGWGPAAVAAACLMWAVDNNLTRKVSLADPVD 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + V S ++ L +F ++ +
Sbjct: 185 IATIKGLVAGSVNVGIASVLGDGLPAVPTAAAAMLVGLLGYGVSLVLFVIALRHIGTART 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G TAP + + S+ I +P+ ++ I + +
Sbjct: 245 GAYFSTAPFVGGIVSLVIFGEPLTAGLVTAAVLMGIGVWL 284
Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 23/76 (30%)
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L + +G+ ST ++ +L + + F+ ++ D
Sbjct: 72 WFWLLAAVFAGGVAGPVLLMFGLTATPSSTASLLLNLEGVLTALLAWFVFQEGFDRRLVA 131
Query: 289 VFGIVVIAMVVYLLPT 304
+V+ VV
Sbjct: 132 GMAAIVVGAVVLSWGG 147
>gi|255261373|ref|ZP_05340715.1| possible transporter, RhaT family, DMT superfamily [Thalassiobium
sp. R2A62]
gi|255103708|gb|EET46382.1| possible transporter, RhaT family, DMT superfamily [Thalassiobium
sp. R2A62]
Length = 307
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 87/293 (29%), Gaps = 15/293 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + A + I + L V + E I R + + +F + Y
Sbjct: 9 RGAVLMMVAMSAFAIGDGLMKSLSGGVPLFEAIFLRGVLTSILLFSVVWYRGLLRIKTTA 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K V L + I AL + P+ +VFL + +
Sbjct: 69 EDKRRILVRCLAEALAAYFF-----IAALFHMPLGDLTAILQALPLTVTLASAVFLGQTV 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-------- 195
+ A L+ +L++ ++ + C + I S
Sbjct: 124 GWRRWFAILVGFGGVLLIVRPGADSFTIYSVYGVATVICATVRDIVTRSLSPNIPSLTVT 183
Query: 196 -FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
L + + G S E + + N + +I G+ + +++
Sbjct: 184 LATALAVTLFAGLMGWTNSFGLSPPEPWVIPNGAEIATIIATGVTIILAYLTIIMAMRQG 243
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+S + YT ++ I+ + D + I GIVV + +
Sbjct: 244 DVSFIAPFRYTGLVVAILVGIIAFGDWPDFLTWIGSGIVVGSGLFAFARERRA 296
>gi|238919214|ref|YP_002932729.1| hypothetical protein NT01EI_1297 [Edwardsiella ictaluri 93-146]
gi|238868783|gb|ACR68494.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 434
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/309 (11%), Positives = 95/309 (30%), Gaps = 18/309 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +V A LWG + + Q++ +S + R+ +S + L
Sbjct: 5 RQGMGYVLVAAALWGSSGVCAQYILQKTGLSAQWLTMFRLTFSGVILLVVSFLNGDRLFA 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ + I+ F+ + + F++P I V + +
Sbjct: 65 PLRHRRDIVGLLWFTLLGAIMV--QLTFLMTIERSNAATATILQFLSPTIIVAWFAAVRR 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+R ++A + ++ H L IA +++ + + +
Sbjct: 123 QRPGLPVMLAIGSSLGGTFLLVTHGDPTSLLISRSALFWGIASAFASAFYTTYPSGLIAR 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G + + ++ + N + + F ++ G +
Sbjct: 183 FGTLPIVGWSMLLGGLMLMPFFAGETAQVQMDNATLLAAFYLVIIGTALTFSLYLKGAQI 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV------IN 307
+ GI+ T PL + S+ +L + + ++ ++V+ +
Sbjct: 243 IGGARAGILSCTEPLCSALLSLLLLGITFGALDWLGTLLITASVVLISCDARAREGINWS 302
Query: 308 SGKNKTKKS 316
+ +T +
Sbjct: 303 RWRRRTAHA 311
>gi|126737664|ref|ZP_01753394.1| hypothetical protein RSK20926_18522 [Roseobacter sp. SK209-2-6]
gi|126721057|gb|EBA17761.1| hypothetical protein RSK20926_18522 [Roseobacter sp. SK209-2-6]
Length = 338
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 81/285 (28%), Gaps = 9/285 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ A + + + E++ +R + V F + + D
Sbjct: 59 FWMIGAIASFSTMAVMGREASVSHDTFEIMLYRSIVGFGIVCFVLKLTGRMHQISTDLFG 118
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ F+ L + YA+ F TP+ + L + ++E L
Sbjct: 119 QHVIRNIAHFTGQNL------WFYAITVIPLAQVVALEFTTPLWVIVLAPLIIQEPLTRA 172
Query: 147 QIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +ALL + +LI+ S I + A + + +
Sbjct: 173 RATSALLGFIGVLIVARPSPDSINTGIVMAAGAAIFFALTLTFTKRLTRSQTIANILFWL 232
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ L +L+ G+ + + A S V M++
Sbjct: 233 TGMQIVLGLVAAGYDGDITLPTAQTFPYLVLVGICGLTAHFCLTTALSLAPASVVIPMDF 292
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + + + +D + I+ A +L
Sbjct: 293 ARLPAVALLGMALYGEMLDIWVLVGAVIIFGANYYNVLAENRAKH 337
>gi|86748447|ref|YP_484943.1| hypothetical protein RPB_1322 [Rhodopseudomonas palustris HaA2]
gi|86571475|gb|ABD06032.1| Protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris HaA2]
Length = 301
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 78/285 (27%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + V + + R W + + +
Sbjct: 17 YLLLSLTSLFWAGNIVLARAVAGHVPPVTLSCVR--WVGAMLLLLPFAWPHLRRDWRRLR 74
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +L + A++ + L Q P+ + RL
Sbjct: 75 AHWGLMFVLSATG--FAINNALAYWGLQFTQALNALLMQSSGPLFVALWSLLLFGVRLTW 132
Query: 146 LQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+Q I L ++ +L + L L+ + Y PV
Sbjct: 133 MQTIGIALSLIGVLTIILRGNLLALAGIDLNRGDLMVAGALCAFGLYSAMMPKRPVTHPL 192
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L F+ G I + ++ + F+ G+
Sbjct: 193 SLLVVTTGGGALLLLPFAVAEFAAGVRPSADWITASSLAYVVIFPSALAYLCFNRGVALI 252
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ V ++ +L + + + +VV + +
Sbjct: 253 GPNRSAPFLHLMPVFGSVMAIVLLGEKPELFHLAGYAMVVAGVFI 297
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 46/142 (32%)
Query: 163 LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHF 222
+ P L L++ + A G + L + + +
Sbjct: 11 WLANQPYLLLSLTSLFWAGNIVLARAVAGHVPPVTLSCVRWVGAMLLLLPFAWPHLRRDW 70
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
L + + + +G++ + +M+ + PL + + S+ + +
Sbjct: 71 RRLRAHWGLMFVLSATGFAINNALAYWGLQFTQALNALLMQSSGPLFVALWSLLLFGVRL 130
Query: 283 DTVRTIVFGIVVIAMVVYLLPT 304
++TI + +I ++ +L
Sbjct: 131 TWMQTIGIALSLIGVLTIILRG 152
>gi|21232057|ref|NP_637974.1| hypothetical protein XCC2626 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767817|ref|YP_242579.1| hypothetical protein XC_1491 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990931|ref|YP_001902941.1| hypothetical protein xccb100_1535 [Xanthomonas campestris pv.
campestris str. B100]
gi|21113798|gb|AAM41898.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573149|gb|AAY48559.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732691|emb|CAP50885.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
Length = 295
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/278 (8%), Positives = 77/278 (27%), Gaps = 13/278 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + I+WG + L+ + ++ R+ + + L +
Sbjct: 20 LELVFLGIVWGCSFLFMRVAAPHFGAAALVEIRLALGATVLLPFLWVARSRFPLHR---- 75
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ A+ + F + + + +T + + + VF ER+
Sbjct: 76 ---WPMLAAIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFVFFGERIGTR 132
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIA-----VTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +A L+ + +L++ L A +
Sbjct: 133 RAVALLIGFIGVLVLATGKSAGLSVGPAALAGATASLLYGIGYNLVKRHMGDLPPAASAA 192
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + + F ++ I+R +
Sbjct: 193 STLGCSALLLAPVAWWQWPSAPVPASAWACAGALGVVCTGLAFLMYYRLIQRIGPARAST 252
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P+ + + +L + + + +++ ++
Sbjct: 253 VTYLVPVFGALLAWALLGEALTWTMLLAAVLILGSVAF 290
>gi|322716745|gb|EFZ08316.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
Length = 315
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 103/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ + +S + R+L++ G+ F G
Sbjct: 18 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVTFSFMHGD 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L+FS F+ + + F++P I V ++
Sbjct: 76 KIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R L + A L ++ ++ H L IA ++A + +
Sbjct: 136 RRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLI 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + ++ G HF + F + S F ++ G
Sbjct: 196 AQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGA 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + S+ +L + +++ ++++ L + +
Sbjct: 256 QLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRAR 313
>gi|261868598|ref|YP_003256520.1| ribosomal protein L11 methyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413930|gb|ACX83301.1| ribosomal protein L11 methyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 287
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 78/285 (27%), Gaps = 2/285 (0%)
Query: 29 FVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVF-FAIVYFSGGLSLLKDTLK 86
++ A LW + + ++ + + ++ R+ + V + + ++ +
Sbjct: 3 YILIALCLWSSSFVAGKYTYTMLDPVLMVQMRLFIATAIVLPMFVRVWKRVPKEIRPQVW 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + T G +
Sbjct: 63 WLGFLNYPAIFLLQFIGLSHTSASSASTMLGLEPFLVVLIGHFFFGDKAKTHHWIFGLIA 122
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ ALLI + L L V +++ + I V + + ++
Sbjct: 123 FLGVALLISGGEETGNISIFGCSLVLFAGVVFASCLRWTQKIIVQLTAQVYTTSSIVLGT 182
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ L + + +++ GI + GI+
Sbjct: 183 ITCLPFTLWLTQSWQIHWNWQGIAGLLYIGIGCSWLAYYLWNKGINSVDSNLAGILVSLE 242
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ I+ +V +L + I + + VV ++ + + N
Sbjct: 243 PVFAIILAVLLLGENISPLSWLGILAVVSTTLISSVYPRLVRRAN 287
>gi|115372670|ref|ZP_01459977.1| permeases of the drug/metabolite transporter (DMT) superfamily
[Stigmatella aurantiaca DW4/3-1]
gi|310823806|ref|YP_003956164.1| hypothetical protein STAUR_6580 [Stigmatella aurantiaca DW4/3-1]
gi|115370391|gb|EAU69319.1| permeases of the drug/metabolite transporter (DMT) superfamily
[Stigmatella aurantiaca DW4/3-1]
gi|309396878|gb|ADO74337.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 78/292 (26%), Gaps = 17/292 (5%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG T L + L + R + L+
Sbjct: 20 ALALLTVFWGTTFLVVKDALGHADPFSFLVLRFGLGAVVLSAVAGRRLFSRETLRRGAL- 78
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ +L + F L ++F + + L V ++
Sbjct: 79 ---------LSLVLFSGYLFQTVGLTRTSPARSAFITGLCVLFVPLLSLVLFRQVPRIPS 129
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
++ +L + L +T + + + + + + F A+ A
Sbjct: 130 LVGVVLSAVGLYFLTQGGADARGAFSWGDLLTLVGSLSYALHIVLTGRFAPAEGARALVA 189
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI------FSYGIKRAKLSTVGI 261
+ S F+ ++ VF ++ R +
Sbjct: 190 VQLWGVALLSAACLPFVETRVAWTGAFVGAVVYCGVFGSAIAISVQTWAQARTGAVRAAL 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P+ + SV + + + ++V+ +VV + + + +
Sbjct: 250 IYAMEPVFTALFSVSLGYETLGPREWSGGSLIVLGVVVSEVGSALWDRWRER 301
>gi|317061869|ref|ZP_07926354.1| conserved hypothetical protein [Fusobacterium sp. D12]
gi|313687545|gb|EFS24380.1| conserved hypothetical protein [Fusobacterium sp. D12]
Length = 299
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 89/302 (29%), Gaps = 15/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A ++G + +WG + ++ + + R S VF I++
Sbjct: 2 AMNQFLLGNGALLLTSFIWGSAFVAQVTGMDLIGPFSFSASRCFLSTLFVFMLILFQKE- 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
KDT K + L + LL TSF + V+ LG
Sbjct: 61 ----KDTTKLKDLLLGGAACGIFLFLGSSCQQVGLLYTTAGKTSFITSLYIVLVPILGIF 116
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
F K+ +N +A L + L ++ + ++ + + + F
Sbjct: 117 FKKK-VNLFTWMAVFLGTVGLYLLAMSGLTEGAAINKGDLFVFLGSFFWAGHILIIDHFT 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI------ 251
++ + + L + V + + + +
Sbjct: 176 KKVNPIKLSCLQFAVTTCLAAIVALSIEAPTLPNIFASWKSIAYAGILSGGIAYTLQIVR 235
Query: 252 --KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + ++ +L + + + I+ IA++V +P+
Sbjct: 236 QKHTTNATLASLILSLESVFGAIAGFVVLHERLKASEILGCVIMFIAILVAQIPSDFFEK 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|302669193|ref|YP_003832343.1| hypothetical protein bpr_III073 [Butyrivibrio proteoclasticus B316]
gi|302396857|gb|ADL35761.1| hypothetical protein bpr_III073 [Butyrivibrio proteoclasticus B316]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/302 (11%), Positives = 87/302 (28%), Gaps = 16/302 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
K+N + T+ TL + A WG T + E V ++ R + + ++Y
Sbjct: 2 KQNTKIYTLTHTLMLLVASFFWGTTFVAQSLGAEYVGAGTYLALRTYIGIIFLLPFVLYR 61
Query: 75 SG----------GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
K + + + + + + + Y + F
Sbjct: 62 DKKEVNNLGLGLQELQDKRSREKQAFIKGGMLAGLFIFLASFAQQYGIAYTSVAKAGFLT 121
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSA 180
+ V + +F R ++ I+ L +L + ++ + L + ++ +
Sbjct: 122 TLYVVFVPIIS-LFFGRRFDNKLWISIALSVLGMYLLCMKGSFYLEIGDALMILSALGFS 180
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
+ + + + I A+ + L +
Sbjct: 181 IQILAVSRYSKRIDPVKLTLAQFIIEAILATIVMFVIEKPDLSSIYSALPAILYAGIFSS 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + + G K + I + +S +L Q + ++ A+V+
Sbjct: 241 GIAYTLQALGQKNLNPAIASIAMCLESVFGTLSGWIVLGQQLSLREAAGCILMFAAIVLT 300
Query: 301 LL 302
Sbjct: 301 QF 302
>gi|238024969|ref|YP_002909201.1| hypothetical protein bglu_2g16260 [Burkholderia glumae BGR1]
gi|237879634|gb|ACR31966.1| Hypothetical protein bglu_2g16260 [Burkholderia glumae BGR1]
Length = 309
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 78/288 (27%), Gaps = 6/288 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
A+ + L + A +WG + + L + R L + ++
Sbjct: 1 MTPAARQHLRANLLMLGAAAIWGSAFVAQRLSLAVIGPFLYTGLRFLLGALVLVPLLLAK 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + L + P + + T+LAV L + F + V+ +
Sbjct: 61 APARAELAALARRPAGLAPGLLLGTLLAVSISLQQIGLQYTKIANAGFISSLYVVLVPLI 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----CFARKTIPV 190
G + + A L + L +++ ++ A
Sbjct: 121 GVLLRHRA-GFGTWLGATLAAVGLYFLSVDEHFTVMVGDGFQLACAVLIAVHVIAVGHFA 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
E + A+ L L G L + +
Sbjct: 180 RRQEPLVLAFQQFAVCGLLCGALGLGVETLDAATLQHALPTLLYGGLLSVGVGYTLQVVA 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++A + ++ + V+ L + + I +++ ++
Sbjct: 240 QRKAAPAHAAVIFSMEGVFAAVAGWAALGETLSPRALIGCALMLAGLL 287
>gi|229817422|ref|ZP_04447704.1| hypothetical protein BIFANG_02684 [Bifidobacterium angulatum DSM
20098]
gi|229785211|gb|EEP21325.1| hypothetical protein BIFANG_02684 [Bifidobacterium angulatum DSM
20098]
Length = 324
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/323 (9%), Positives = 86/323 (26%), Gaps = 30/323 (9%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + ++WG+ + Q ++ +S L + R + +V
Sbjct: 1 MQKKEIAGMGCLILTALIWGLAFVSQVQGMDSMSPLFFNATRFTLGALSLVPLLVALRMR 60
Query: 78 ------------------------LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALL 113
++ + V ++ + L
Sbjct: 61 QHSALGSSRVLVSGKAPTITLGDGRAIAMPSCFGNPVVIGIICGLVLFTASTTQQYGVLY 120
Query: 114 TRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA 173
R + F + V+ L + L+ R++ I++ +L + ++ + G ++LA
Sbjct: 121 CRSAGRSGFITALYIVMVPLLAFMVLRRRIHANVIVSVVLAVFGFYLLCITDGFGSITLA 180
Query: 174 -----IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ A + I A A+ + G +
Sbjct: 181 DLVLLGSAVLFAAHILVIDTFGRDLDALTISFFQTATTAVLSWIGTLMEGSVDWSGAGQA 240
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ + + G + + ++ + IL + + +
Sbjct: 241 WLAVVYAGVGSVGVAYTLQVIGQQFVPPTRGAMLMSLESFFSALGGAIILGEVMTPRGYL 300
Query: 289 VFGIVVIAMVVYLLPTVINSGKN 311
++ ++ LP +
Sbjct: 301 GCALIFAGTMLAQLPVDRLKRQR 323
>gi|209886268|ref|YP_002290125.1| permeases of the drug/metabolite transporter [Oligotropha
carboxidovorans OM5]
gi|209874464|gb|ACI94260.1| permeases of the drug/metabolite transporter [Oligotropha
carboxidovorans OM5]
Length = 306
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/285 (9%), Positives = 76/285 (26%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A + W + + V + + R L++ + +
Sbjct: 18 YLILCLAMMFWAGNVVIGRHAAGVFPPMALSYLRWLFAFLTILPFAWSDLK----ADWPI 73
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+LV S T +A ++L P+ V RL
Sbjct: 74 IRRHFGLVLVLSVTGVATFNTLGYWSLQYTTALNGLLLQSSGPLYVALFALVLFNVRLTW 133
Query: 146 LQIIAALLIILSLLIMTLHSGIP-----------LLSLAIAVTWSAYCFARKTIPVGSSE 194
Q + + ++ +L + L + + Y P
Sbjct: 134 GQALGIAISLIGVLTIILQGEFSALLRIEFNKGDIGYTVALFIFGLYSAVAARRPPMKPL 193
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + G + + + ++ + ++ G++
Sbjct: 194 ALIAASFGIGSLFILPLFILEMWSGRVTPINAHTIPILIYVSIFPSTLSYMFYNRGVELI 253
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ V ++ L + + + + +V +V+
Sbjct: 254 GANRAAPFLHLIPVFGSVMAIGFLGETLHLYHMVGYALVFAGVVL 298
>gi|148241198|ref|YP_001226355.1| DMT family permease [Synechococcus sp. RCC307]
gi|147849508|emb|CAK27002.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Synechococcus sp. RCC307]
Length = 303
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 91/284 (32%), Gaps = 20/284 (7%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + + + L + L + V EV+ R L SL ++ I +
Sbjct: 18 MVASAFSFSLMSLCVKQLGGRIPVAEVVFIRALISLGLSWWVI--------QRQGVSPWG 69
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
MLV+ + + F A+ + ++ P + L L ER +
Sbjct: 70 HRRPMLVWRGVVGTLALFCFYGAISQLPLAAATVLQYLYPTFTAALAWGALGERAGKRIL 129
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTIPVGSSEGFF 197
+A L L +L++ + L+ A+ A A + V
Sbjct: 130 LAMALGWLGVLLVAQPDWLAQLTGDSAMDPLPALAVTIGITGALLTALAYVTVRHLATDE 189
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ L V + N D +LIG GL + G+ +
Sbjct: 190 HRSVIIFYFPLMSVPMALPFVLANPVWPNAVDWAWLIGVGLFTQLGQIFLTQGLASMPAA 249
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ Y + + + L + I+ + + +V+ A ++ +
Sbjct: 250 RATAINYVQVVFAALWGLLFLGESINELMVMGAVLVLGATLISI 293
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 45/133 (33%)
Query: 176 VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
+ SA+ F+ ++ V G V+ I AL + + + L+
Sbjct: 18 MVASAFSFSLMSLCVKQLGGRIPVAEVVFIRALISLGLSWWVIQRQGVSPWGHRRPMLVW 77
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
G++ + F I + L+ +++Y P + L + + + +
Sbjct: 78 RGVVGTLALFCFYGAISQLPLAAATVLQYLYPTFTAALAWGALGERAGKRILLAMALGWL 137
Query: 296 AMVVYLLPTVINS 308
+++ P +
Sbjct: 138 GVLLVAQPDWLAQ 150
>gi|330992905|ref|ZP_08316848.1| S-adenosylmethionine uptake transporter [Gluconacetobacter sp.
SXCC-1]
gi|329760059|gb|EGG76560.1| S-adenosylmethionine uptake transporter [Gluconacetobacter sp.
SXCC-1]
Length = 309
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 96/276 (34%), Gaps = 7/276 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + F AY + I+ Y++ L + EV S ++ F G +
Sbjct: 9 GMMLAFAAYASFSISDAYSKLLAGQIDPFEVAF-----SGGVFGLLLIPFIRGKNESYRD 63
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L + M + A + A + F+ P+ L V L+E+++
Sbjct: 64 LFVIRQPVMWLVRAAATFAATAASVEAFMLLPMPEAFSLIFLMPLFVTILSVVLLREKVS 123
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L ++ ++ + +LI+ L + SA A I S + +
Sbjct: 124 TLGWLSVIVGFIGVLIVLRPGLRALHFGHLCALISAVANAVGVIAYRMSGRNTPRLSMFG 183
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPD-TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+V NG H +FL GYG L + + RA S + + +
Sbjct: 184 SSLCGPLVGNGILMVAHAGWPQGATVWMFLFGYGFLAALGQLLMMMAATRATASAIALPQ 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y+ L + S ++ +P+D +++ + +
Sbjct: 244 YSQMLWAVAFSFYVFHEPLDEWTFAGIAVIIASGLF 279
>gi|329767032|ref|ZP_08258560.1| hypothetical protein HMPREF0428_00257 [Gemella haemolysans M341]
gi|328837757|gb|EGF87382.1| hypothetical protein HMPREF0428_00257 [Gemella haemolysans M341]
Length = 279
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 91/279 (32%), Gaps = 7/279 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
MG + A + + L+ + + ++ R + ++ ++ ++ K
Sbjct: 1 MGIFCIIVAGFGFSLMALFIKLAGNLPSMQKGFFRNIIAVGISSIPLIKHWKSINFPKGK 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
L + VF L + YA+ ++ ++P + + L +F KE++
Sbjct: 61 LSWSVLISRSVFGTIGLVFN----FYAITHISLADSTIIQKLSPFVILILSYIFFKEKMT 116
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
Q+IA ++ + + + SG +S+ + G
Sbjct: 117 KFQMIAIVIAFIGVGFIIKPSGDGFISMGALAALLGAFCSGIAYTCVRYLGTHNVSGEFI 176
Query: 205 IPALFYVVWNGFSGG--EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
I + + + + L+ G + ++ K A + +
Sbjct: 177 IFFFSTLSTLLLLPYLIFDYRVMTMYQLSMLVLAGASATIGQYGVTFAYKYAAAKNISVF 236
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV-IAMVVY 300
+Y+ L + + D I + IV+ + +++
Sbjct: 237 DYSQVLFSGIFGFIFFNELPDLQSLIGYIIVISVGIILV 275
Score = 36.8 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 38/137 (27%)
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
+ I + A G+ I + F
Sbjct: 1 MGIFCIIVAGFGFSLMALFIKLAGNLPSMQKGFFRNIIAVGISSIPLIKHWKSINFPKGK 60
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
LI + + Y I L+ I++ +P ++++ S K+ + +
Sbjct: 61 LSWSVLISRSVFGTIGLVFNFYAITHISLADSTIIQKLSPFVILILSYIFFKEKMTKFQM 120
Query: 288 IVFGIVVIAMVVYLLPT 304
I I I + + P+
Sbjct: 121 IAIVIAFIGVGFIIKPS 137
>gi|325920726|ref|ZP_08182632.1| putative permease, DMT superfamily [Xanthomonas gardneri ATCC
19865]
gi|325548778|gb|EGD19726.1| putative permease, DMT superfamily [Xanthomonas gardneri ATCC
19865]
Length = 283
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/272 (8%), Positives = 79/272 (29%), Gaps = 13/272 (4%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
I+WG + L+ + + ++ R+ + + L +
Sbjct: 14 GIVWGCSFLFMRVAAPKFGTVVLVEIRLALGALVLLPFLWLARERFPLQR-------WPM 66
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ A+ + F + + + +T + + + +F E++ + +A L
Sbjct: 67 LAAIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFLFFGEKIGTRRALALL 126
Query: 153 LIILSLLIMTLHSGIPLLSLAIA-----VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ + +L++ L A + + +
Sbjct: 127 IGFIGVLVLATGKSAGLSVGPAALAGATASLLYGIGYNLVKRHMGNLPPAASAASTLGCS 186
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + + + + F ++ I+R + + Y P
Sbjct: 187 ALLLAPLAWWQWPTTPVPAVAWACATALGVVCTGLAFLMYYRLIQRIGPARASTVTYLVP 246
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + +L +P+ + +++ ++
Sbjct: 247 VFGALLAWSLLGEPLTWTMLVAAALILGSVAF 278
>gi|317182483|dbj|BAJ60267.1| hypothetical protein HPF57_1193 [Helicobacter pylori F57]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 103/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSVLGLVGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|299134129|ref|ZP_07027322.1| protein of unknown function DUF6 transmembrane [Afipia sp. 1NLS2]
gi|298590876|gb|EFI51078.1| protein of unknown function DUF6 transmembrane [Afipia sp. 1NLS2]
Length = 316
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 89/276 (32%), Gaps = 14/276 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + F + I++ + ++LE EV R L++L +F
Sbjct: 1 MKIIPAISFKLFSTIMFALMGAQARYLEGAYPAGEVAFFRSLFALIPIFLFFGLRGELDQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + V AL + ++ P+++V + L
Sbjct: 61 AFKTK-----NPAAHLIRGSFAVVGTFCTFAALARMPIGDYTAIVYIAPLLTVVFSWLVL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGS 192
KE + + A + +L+M + ++ + +A A TI +
Sbjct: 116 KEEVRAYRWSAVAVGFCGVLLMLVPYFRNHVAWSSTIGLGIMFALMNACTTAGATIQIRR 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG-NIPDTLFLIGYGLLNSFVFCIFSYGI 251
V+ AL + + F+ + L L LIG G+ F+
Sbjct: 176 ITATETTPAVVTFMALIVLTSSLFTIPFGWTLPATPLHWLLLIGIGITGGLGQMGFTESY 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ A S + ++Y+A + + ++ +
Sbjct: 236 RYAPASFLAPLDYSAMIWAFLLGYWVFDEVPTGYVL 271
>gi|257464364|ref|ZP_05628741.1| transporter [Fusobacterium sp. D12]
Length = 297
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 88/300 (29%), Gaps = 15/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G + +WG + ++ + + R S VF I++
Sbjct: 2 NQFLLGNGALLLTSFIWGSAFVAQVTGMDLIGPFSFSASRCFLSTLFVFMLILFQKE--- 58
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
KDT K + L + LL TSF + V+ LG F
Sbjct: 59 --KDTTKLKDLLLGGAACGIFLFLGSSCQQVGLLYTTAGKTSFITSLYIVLVPILGIFFK 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
K+ +N +A L + L ++ + ++ + + + F +
Sbjct: 117 KK-VNLFTWMAVFLGTVGLYLLAMSGLTEGAAINKGDLFVFLGSFFWAGHILIIDHFTKK 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI-------- 251
+ + + L + V + + + +
Sbjct: 176 VNPIKLSCLQFAVTTCLAAIVALSIEAPTLPNIFASWKSIAYAGILSGGIAYTLQIVRQK 235
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ + ++ +L + + + I+ IA++V +P+ K
Sbjct: 236 HTTNATLASLILSLESVFGAIAGFVVLHERLKASEILGCVIMFIAILVAQIPSDFFEKKK 295
>gi|239932550|ref|ZP_04689503.1| hypothetical protein SghaA1_30293 [Streptomyces ghanaensis ATCC
14672]
gi|291440915|ref|ZP_06580305.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291343810|gb|EFE70766.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 324
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 75/281 (26%), Gaps = 6/281 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + + +V R+++ + A+ L T + G
Sbjct: 44 SLIWGFSFLLIKVGTQGYAPFQVTLGRLVFGTAVLAVAMAVRRERLPRGARTWSHLAVAG 103
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ + + + + + V L + L
Sbjct: 104 FLLNALPFSLFAFAELTIPSTLAGICNATSPLWGMALSLVALSEDRPTRVRVAGLGLGFL 163
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCVLAIPA 207
++ L G+ A+A+ S + G + L +
Sbjct: 164 GVLTVLGAWQGFQGLDARGTALALLASLSYPVGWIYVRRTLAGSSHSNLSLTGGQLLLAT 223
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L V P + L I + +T ++ Y P
Sbjct: 224 LQLAVVTPLFTTLPTDFAVGPLLAVVALGTLGTGLAVLIQYGLVAEVGPTTGQMVTYFIP 283
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ + V +L + + + IV+ + +
Sbjct: 284 VIAAAAGVVLLGETLVWSTPVGAVIVLAGAALTQAGPRRTA 324
>gi|228938181|ref|ZP_04100798.1| hypothetical protein bthur0008_8500 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228971058|ref|ZP_04131693.1| hypothetical protein bthur0003_8410 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977662|ref|ZP_04138050.1| hypothetical protein bthur0002_8730 [Bacillus thuringiensis Bt407]
gi|228782050|gb|EEM30240.1| hypothetical protein bthur0002_8730 [Bacillus thuringiensis Bt407]
gi|228788654|gb|EEM36598.1| hypothetical protein bthur0003_8410 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821496|gb|EEM67504.1| hypothetical protein bthur0008_8500 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326938683|gb|AEA14579.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 295
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 87/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + + + ++++ + T+K
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFKTVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVVQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 185 GLFSLIFSFIIETPKLPSTIDSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ L
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILLSVLIAELD 281
>gi|229092052|ref|ZP_04223238.1| Transporter, EamA [Bacillus cereus Rock3-42]
gi|228691317|gb|EEL45079.1| Transporter, EamA [Bacillus cereus Rock3-42]
Length = 309
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 89/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKT 187
+ER + I +++ + + L + A W Y +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S L + + + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMLSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|189184695|ref|YP_001938480.1| hypothetical protein OTT_1788 [Orientia tsutsugamushi str. Ikeda]
gi|189181466|dbj|BAG41246.1| hypothetical protein OTT_1788 [Orientia tsutsugamushi str. Ikeda]
Length = 290
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 90/292 (30%), Gaps = 8/292 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L+ F A + + + ++ + +S ++ R S + I++
Sbjct: 6 NNYLKGILWFFLALLCSVLNDIISKKIGLSLSAAQISFLRSFGSTLALIPFILFTG---- 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + +L ++Y L + F P+I++ L ++ L
Sbjct: 62 ---IKTLKSKTLKIHFLRGILLFCSLSTWVYGLTITSVASVTIISFSIPLITLILANLVL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + + +A +L + ++I + + + SA+ FA I
Sbjct: 119 NEDVKWYRWVATILGFIGVIIAIPTTKTIFDIRILVLFLSAFIFAILDIINKKFVNSESM 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +L A F + + N + G + + S V
Sbjct: 179 LSMLFYSAFFTTIVALPFAYYSWKPLNYTYWPLIFILGCSANLILYFLLKAFSLVDSSAV 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
Y +L ++ + + I++ + N K+
Sbjct: 239 APYRYIELILSAIAGFLYFNEAVSYYIWFGGAILIFSTTFIFYTEKANINKH 290
>gi|88706048|ref|ZP_01103756.1| conserved hypothetical protein, membrane [Congregibacter litoralis
KT71]
gi|88699762|gb|EAQ96873.1| conserved hypothetical protein, membrane [Congregibacter litoralis
KT71]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/276 (9%), Positives = 78/276 (28%), Gaps = 1/276 (0%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +WG + ++ + + Q+ ++ R+L + + L++ K
Sbjct: 6 LLQLIALAAIWGSSFMFMRLAVSQLGPTWLLEIRLLAASLILLIISRALRRPLNIKKHWR 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + A + T+ + + ++ + +
Sbjct: 66 HYLTLGALNTTLPFWAFAYAAQTLPASMLAILNSTAPLWGILIGFLWRGKAITPRAVIGL 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L +A + ++ L + + + A Y A +
Sbjct: 126 LLGMAGVASLVGLGGLAVQPEALWAVVLTASAAICYGIASSYAEYAEKVETYANAHGSLW 185
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A V+ L+ L + ++ + I + + Y
Sbjct: 186 AATLLVLPFMPFAPVPEVWAPGAVAAALVLGVLCTGVAYLLYFHLIATVGAPSALTVGYL 245
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
PL ++ L + + + G+V+ ++
Sbjct: 246 IPLWGVLWGWLFLDEAVGLHTLLGAGLVLSGTMLVT 281
>gi|47564766|ref|ZP_00235810.1| hypothetical protein BCE_G9241_0820 [Bacillus cereus G9241]
gi|47558139|gb|EAL16463.1| membrane protein, putative [Bacillus cereus G9241]
Length = 303
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKATTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNVGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQILGTMIVVTGCYLFS 285
Score = 35.7 bits (80), Expect = 10.0, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WMIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|299783251|gb|ADJ41249.1| DMT superfamily drug/metabolite transporter [Lactobacillus
fermentum CECT 5716]
Length = 305
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/295 (10%), Positives = 88/295 (29%), Gaps = 10/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L C LWG + Q + ++ +++ R++++ + +
Sbjct: 2 TKSNKGILLAICGASLWGASGAGAQLIFSHTSMTASWLVAVRLIFAGLIMTVIGLV-RNP 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++ F+ + ++ A+ T + ++ PV+ + ++
Sbjct: 61 GQTKGLLTNRGDLGILIAFTFLGMLNSQFTYMKAVQTSNAPTATVIQYLQPVLIIVWFTL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-- 195
+ L I++ + ++ + + LSL + A
Sbjct: 121 RNRAWPRRLDILSITIALVGTFFLVTGGHLNSLSLTPIALFWGLMCALAAAIYTVLPQGL 180
Query: 196 ----FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ +C L + + + + + +F I
Sbjct: 181 LSRYDTLTVCGLGMLIGGIFMSPVLVLTPLPNMTAFDWGTLVYIVIFGTILAYTLFLSSI 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ G++ PL+ +V L + + ++++ ++ LP
Sbjct: 241 NYISPAVTGMLSAFEPLVATTLAVAFLGTKLTAASVLGSLLIILCTLIQSLPLKR 295
>gi|284029975|ref|YP_003379906.1| hypothetical protein Kfla_2016 [Kribbella flavida DSM 17836]
gi|283809268|gb|ADB31107.1| protein of unknown function DUF6 transmembrane [Kribbella flavida
DSM 17836]
Length = 311
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 76/270 (28%), Gaps = 1/270 (0%)
Query: 30 VFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + L + V VL V+ R S + + + ++
Sbjct: 11 LLVVALVWGSSYLVAKTATTVLPVLAVLFARYAISALACGTLVAFRHRRRRWTRAEVRIG 70
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+G+ + +L + A + + + L +
Sbjct: 71 SLLGVTQAAVLVLETYGVAHTSAANAGLIISLTIVLTPLLDRTGSRSLPWTFFLAAGLCV 130
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A L+ S + G L+ A V + S + + + +
Sbjct: 131 VAVGLLTSSTGLHAPRLGDVLMLAAAVVRAGHVALVGRLTAGRSMDPLHLTSVQTIVGSA 190
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + + + F F ++ ++ S ++ T P+
Sbjct: 191 LFFPLAIPHLPDLVHSSATTWAQLIYLALFCSVFAFLAQTWAVQNTSASRACLLLGTEPI 250
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + + + + T+ +++
Sbjct: 251 WAVAIGISLGGEHLTLWATLGAVLMIAGTY 280
>gi|237799373|ref|ZP_04587834.1| RarD protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022229|gb|EGI02286.1| RarD protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 294
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 111/295 (37%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A +L+G+ YT ++ + E+ R+L ++P ++ +
Sbjct: 3 KGVVLSVLASVLFGVMYFYTSLMKPLDGEEIFGWRMLLTVPCATLFMLVSGDWRRVRDVA 62
Query: 85 LK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ P L+ S+ +L F++A L + S YF+ P+ + G V E
Sbjct: 63 VRLRQQPLLFFGLLLSSLLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMILTGRVVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L++LQ +AA+ ++ + G + F + G +
Sbjct: 123 HLSYLQKVAAVFAMVGVTHELWRLGSFSWETLLVAGGYPLYFVLRRKLKTDHLG---GLW 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L +W +G L + G++++ + + S G+
Sbjct: 180 FDMLLMLPIGLWFISNGQPQAIQQTPLLYLLIPLLGVISASALVSYILASRLLPFSLFGL 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y P+L++ ++ + + I + + + +A+VV ++ + + + +
Sbjct: 240 LSYVEPILLVGVALLLG-ESIGRDEWLTYLPIWLAVVVLMIEGAKHMLAQRRRDA 293
>gi|126726869|ref|ZP_01742708.1| hypothetical protein RB2150_03114 [Rhodobacterales bacterium
HTCC2150]
gi|126703827|gb|EBA02921.1| hypothetical protein RB2150_03114 [Rhodobacterales bacterium
HTCC2150]
Length = 290
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 95/292 (32%), Gaps = 9/292 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ +++ A + + + + + L + E++ +R + + + I Y
Sbjct: 3 RSNPKLAAVYMIGAIVSFTLMAIAGRELGGSLDTFEIMMYRSIIGILIMVTCITYLGRW- 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + + +F + YA+ F P+ +F
Sbjct: 62 -----GDIHRRRMPLHLFRNAAHFTGQNLWFYAVTLIPLAQLFALEFTVPIWVALAAPLF 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L E + +A L + +LI+T + L IA +A FA I
Sbjct: 117 LGESFTRTKSLAIGLGFIGILIVTRPGSMGLSIGIIAAATAAIAFAITAITTKKLTQSEN 176
Query: 199 EMCVLAIPALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ +L + V+ G + + ++ G + + A
Sbjct: 177 ILTILFWLTILQAVFGALCAGFDGVITWPSGINLFWVTLVGCAGLLAHFSLTRALHLAPA 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
S V M++ ++ V I +P+D + ++ A + + + ++
Sbjct: 237 SVVTPMDFARLPVVAVVGAMIYAEPLDPMIIFGAVVIFAANYINIRSEMRST 288
>gi|317180959|dbj|BAJ58745.1| hypothetical protein HPF32_1163 [Helicobacter pylori F32]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 102/302 (33%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|228915638|ref|ZP_04079225.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228844056|gb|EEM89118.1| Transporter, EamA [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 309
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 92/300 (30%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + F L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLFITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTI 188
+ER + I +++ + + L + A +
Sbjct: 121 KQERFSMKVQIGSIIAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIF 247
+ + I + V++ F+ + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTLSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 300
>gi|168259724|ref|ZP_02681697.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|205350960|gb|EDZ37591.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
Length = 306
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 85/288 (29%), Gaps = 4/288 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 63 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 182 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y P++ ++ + + + + G++V A+V+ L +
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGERLSPIEWAALGVIVFAVVLVTLGKYL 289
>gi|126727255|ref|ZP_01743091.1| Putative transporter, RarD family, DMT superfamily protein
[Rhodobacterales bacterium HTCC2150]
gi|126703464|gb|EBA02561.1| Putative transporter, RarD family, DMT superfamily protein
[Rhodobacterales bacterium HTCC2150]
Length = 301
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 79/291 (27%), Gaps = 4/291 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY---FSGGLS 79
M G L A ++ + + V E + R ++ + + + L
Sbjct: 6 MTGILLKIMAVTIFTVMMALIKATSADVPFGEAVFFRSAMAMVVLVVWLKWQGDLGAALR 65
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + + F
Sbjct: 66 TDRVIGHMARGLAGSSAMGLRFFCLGILTFPEVTVLAFASPLILVIFAAMFLGEKVRAFR 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + +++ L + AI + SA A + V
Sbjct: 126 YSVVIFGFVGVIIILSPRLQSVGADLDFIQTLAAILMIASAALAALAQVFVRKLIATESV 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ +L + + + + + LI G++ + + A+ S V
Sbjct: 186 GAIVFYFSLSTTLLSLTTLPFGWTIPPWDAFWMLILAGVIGGIGQICLTACYRYAEASVV 245
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+YT+ LL + F + + + GIVV + ++ + K
Sbjct: 246 APFDYTSILLALAIGYFFFDELPTGIMLLGAGIVVASGILIIWREQSLKKK 296
>gi|53804079|ref|YP_114262.1| hypothetical protein MCA1824 [Methylococcus capsulatus str. Bath]
gi|53757840|gb|AAU92131.1| putative membrane protein [Methylococcus capsulatus str. Bath]
Length = 299
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 88/297 (29%), Gaps = 13/297 (4%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLE----QVSVLEVISHRVLWSLPGVFFAIV 72
++ + G + A +L+ + + L ++ + V R++ +L + +
Sbjct: 7 RSSKPRNIRGLWAMLFASLLFSVMSVSVYALGVRHPELPTMTVSFFRIIVNLAVLLLPAL 66
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
S SLL D + G+ A IL+ ++ +F + V
Sbjct: 67 IRSRIPSLLGDMRPSLWLRGLFGSLALILS------FISIQRIGPGEAAFLGASSGVFVA 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIP 189
LG L +R + A ++ L ++ L L + A +
Sbjct: 121 LLGPKVLAQRNSGWIWAALAGSLVGLYLLMRPRADVSDELGRLMALGSGFLSALAYLMVA 180
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + F G+ L+ GL S + +
Sbjct: 181 RAGQSNPPGTVVFYFCAVAIPMHLAWFGLSGFTVPGDGEAWALLLVCGLAASGAQVLMTR 240
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + + V + Y P+ + + D +V++ V+ +
Sbjct: 241 AYQESPAALVSAVSYATPVFNLAFGWLWFAKAPDGTALAGCALVLLCGVLLPFLSTR 297
>gi|86144564|ref|ZP_01062896.1| putative membrane protein [Vibrio sp. MED222]
gi|85837463|gb|EAQ55575.1| putative membrane protein [Vibrio sp. MED222]
Length = 297
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 85/287 (29%), Gaps = 13/287 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F +WG + + + + +R +++ + + + + +
Sbjct: 3 YLLPFFTVCIWGANAIVNKLAASTIEPSAMSFYRWFFAMLILTPFCI----RPVMKQWAV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + ++ YA LT + + P+ISVFL L + ++
Sbjct: 59 IKPNLSKLAFLGFLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLHKSISS 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARKTIPVGSSEGFF 197
L I+ +L + L +M + + Y +
Sbjct: 119 LSIVGGVLSLSGLALMLGKGDPLFFMHQELTQGDGYMLIAAFVYASYCVLLKRWKMPISS 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + E L + ++ I
Sbjct: 179 WVVIYIQGLFAVAMLTPLWLTSEQLLPPQQAIPLIAYAAVAASILAPWMWVKAIDTIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + P++ IV + L + I+ I +V+ +++ +
Sbjct: 239 SSAMFMNLMPVIAIVLASTWLGEKINQFHIIGGAMVISGVILTQIKR 285
>gi|322376529|ref|ZP_08051022.1| putative integral membrane protein DUF6 [Streptococcus sp. M334]
gi|321282336|gb|EFX59343.1| putative integral membrane protein DUF6 [Streptococcus sp. M334]
Length = 304
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 89/288 (30%), Gaps = 12/288 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + G + ++L E+ L + R + + + F G +++
Sbjct: 10 LISILLTTLFMGSSFPTGKYLIVVEKTPPLLLGGVRFIIAGLVMLVLSFLFGKGGTIIPK 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQ---GFLTSFSYFVTPVISVFLGSVFLK 140
+ + +LV + +L L ++S F P+ FL LK
Sbjct: 70 SQGSKIKGFILVVTIGLLQTAGTMGFLNLALAHDVSSSMSSIILFTNPLWLAFLAHFLLK 129
Query: 141 ERLNHLQIIAALLI------ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L +I A +L + L + G L +K
Sbjct: 130 DTLTIQKISALVLGVAGVVTCIGLDVSAFSLGALFALLGSFCWSINTVVTKKIPFDNGPW 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F +L L+ LG F+ + F ++ Y + +
Sbjct: 190 IFTAWQLLLGGVFLYLFSIPVHESYNFLNLGFWGWVWFIWLIIPASVGSFGLWFYSLGQR 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + P+ + S+ L +P + +VV+A+V+
Sbjct: 250 GATVASSFLFLVPVFSTIFSIMGLHEPFTLNLVLGGSMVVLALVLVNW 297
>gi|295706070|ref|YP_003599145.1| hypothetical protein BMD_3964 [Bacillus megaterium DSM 319]
gi|294803729|gb|ADF40795.1| integral membrane protein (DUF6) [Bacillus megaterium DSM 319]
Length = 308
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/268 (11%), Positives = 88/268 (32%), Gaps = 5/268 (1%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
+ + ++ + +R+L+++ + + + T+K + +
Sbjct: 22 SFSSILIKW-SDAPASILGMYRLLFTVLLFLPFLPWRQMKILFKNSTVKEWLMLAVSGVF 80
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+ + W + + V VI + ++ + I+ A+ +
Sbjct: 81 LGLHFLFWMESFSHTTVASAMILTALEPVFVVIGAYFLFKEKTSKVGIISILIAVSGSVI 140
Query: 158 LLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
+ + L + + V I L V+
Sbjct: 141 IASGDIGVSKTALYGDLLSILGTVAVSVHMLAGQELCRKMPSIIYSFAVFLIGGLVLFVY 200
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
N ++ + +FL+ + N F +F++ + +T+ + P+ I+
Sbjct: 201 NVWTHISLTQYESKDWWIFLLLALIPNIFGHALFNWLLNYVGATTISMAILGEPIGAIIL 260
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ F+L + + + IV+I+++++L
Sbjct: 261 AYFLLGEMTTVSQLVGGMIVMISVMIFL 288
>gi|270356882|gb|ACZ80668.1| putative integral membrane protein DUF6 [Filobasidiella
depauperata]
Length = 655
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/322 (10%), Positives = 85/322 (26%), Gaps = 52/322 (16%)
Query: 25 MGTLFVFCAYILWGITPLYTQF---LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G +V A + + L ++ + +S +I R+ + G ++ LL
Sbjct: 88 LGLAYVAFAQLFFVFMGLTVKYFLSVTGMSATTLIFVRMAITSVGCVVSLYAIKDPNPLL 147
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
V + + +L F++P + LG +FL E
Sbjct: 148 GPPEIRKML----VLRGFFGWLGLLSYYQSLRGLTLSDAVTIQFLSPNVVALLGLLFLHE 203
Query: 142 RLNHLQIIAALLIILSLLIMTLH------------------------------------- 164
++ +I+A + ++ ++
Sbjct: 204 TMSRREIMAGFFCLAGVIFVSQPPFLFGGKGEEILFPDDGQGTRLDLPLSPGEGNQEGVD 263
Query: 165 -SGIPLLSLAIA-------VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF 216
SG + + + + + + V W
Sbjct: 264 TSGRTISVIWAFVNILFASMASDYREDTTIRWIGSKAHALHSIAYFSYLCTITSVFWLLI 323
Query: 217 SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVF 276
+ + + G+ + + G++R K + Y +V F
Sbjct: 324 DPSPLIWPSSTFSLFLIFLIGVFGFLGQILLTMGLQREKAGRASLAMYLQVAFALVFEFF 383
Query: 277 ILKQPIDTVRTIVFGIVVIAMV 298
+ + + +++ + V
Sbjct: 384 LWGTIPSFLGAMGTAVIITSAV 405
Score = 48.4 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 58/180 (32%)
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ L + L I + L + ++ + G+ ++ A + + V
Sbjct: 54 TETLMEQPHPFPDSILSWITSRLPASLVHFVSQNLGLAYVAFAQLFFVFMGLTVKYFLSV 113
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ +AI ++ VV + LG L+ G +
Sbjct: 114 TGMSATTLIFVRMAITSVGCVVSLYAIKDPNPLLGPPEIRKMLVLRGFFGWLGLLSYYQS 173
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ LS +++ +P ++ + + L + + + + ++ P + GK
Sbjct: 174 LRGLTLSDAVTIQFLSPNVVALLGLLFLHETMSRREIMAGFFCLAGVIFVSQPPFLFGGK 233
>gi|241760276|ref|ZP_04758371.1| putative membrane protein [Neisseria flavescens SK114]
gi|241319154|gb|EER55632.1| putative membrane protein [Neisseria flavescens SK114]
Length = 296
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 83/284 (29%), Gaps = 14/284 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+G+ +V A + + + L + S E++ R+L S +
Sbjct: 9 LGSAWVVIAALSFTVMNLSVKAASTHFGFSSGELVFWRMLVSTLFLGIMAKAQGNTF--- 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + I + +Y+++ + + + LKE
Sbjct: 66 -----STPHWKTHLNRSVIGTLAMMCTLYSVIHLPLATGVTLNYTSSIWLAIFSFFILKE 120
Query: 142 RLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
R+ ++ + ++++ G +L + +A + S G
Sbjct: 121 RITLYTQAILVMGFIGVILLLNPSFQGGQEFAALVSLAGGAMSGWAYLQVRELSLLGEPG 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
V + ++ +S + +L G G+ + K K T
Sbjct: 181 WRVVFYLSLTGLIMSAIWSCFTGWHPLTASSLPYLAGIGISAMIAQLAMTRAYKVGKKFT 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
V + Y + +S V + I I+V V
Sbjct: 241 VASLSYLTVVFSALSGVLLFGDKITWQEAAGMVIIVAGGVFSSF 284
>gi|196037577|ref|ZP_03104888.1| transporter, EamA family [Bacillus cereus NVH0597-99]
gi|196031819|gb|EDX70415.1| transporter, EamA family [Bacillus cereus NVH0597-99]
Length = 303
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 93/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE++N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLSEELTWIQIVGTMIVVTGCYLFS 285
Score = 35.7 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 38/101 (37%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
I A+ ++ + + ++ + +++ + VG++
Sbjct: 40 WIIAIVCLLPMVWFKEKKIIPPRAAILPLILMGISGVALFNIFQFLALEKTSATNVGLIS 99
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + + SV LK+ ++T++ + + +++ LL
Sbjct: 100 TLNAISIALFSVLFLKEKVNTLQILSMILSFFGVILVLLKG 140
>gi|91204836|ref|YP_537191.1| S-adenosylmethionine transporter [Rickettsia bellii RML369-C]
gi|157826406|ref|YP_001495470.1| S-adenosylmethionine transporter [Rickettsia bellii OSU 85-389]
gi|122426146|sp|Q1RKL2|SAM_RICBR RecName: Full=S-adenosylmethionine uptake transporter
gi|91068380|gb|ABE04102.1| S-adenosylmethionine transporter [Rickettsia bellii RML369-C]
gi|157801710|gb|ABV78433.1| S-adenosylmethionine transporter [Rickettsia bellii OSU 85-389]
Length = 291
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 88/288 (30%), Gaps = 8/288 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + + + + +++L + EV R +S + +VY+
Sbjct: 10 IGIGWFLLSLVSSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYYGKN------ 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +L + Y L + F P+ ++ L FL E +
Sbjct: 64 -TLKTSRPFVHILRGLLLFFGMTSWTYGLSIAPVTTATVISFSIPLFTLILAVFFLNENI 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + ++ + L+I + +A FA I + +L
Sbjct: 123 IWQRWVVTIVGFVGLVITLKPHAEDFNPEMLYFVLAAISFAMLDIINKKFVVKESMISML 182
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+ V + + ++ + + L G S + + +
Sbjct: 183 FYSAIVTAVVSIPAAANYWLTPTLFELALLFILGSSGSLILFLLLKAFSMVDATATAPYR 242
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
Y ++ +++ FI + D I++ A + + K
Sbjct: 243 YLELVISAIAAYFIFNEFPDKSTLHGAVIIIPATLFIIYSEKKAMSKK 290
>gi|262038909|ref|ZP_06012253.1| membrane protein [Leptotrichia goodfellowii F0264]
gi|261747074|gb|EEY34569.1| membrane protein [Leptotrichia goodfellowii F0264]
Length = 291
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/275 (10%), Positives = 87/275 (31%), Gaps = 3/275 (1%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ F W + ++ + L + + R + S + F ++ + LKD
Sbjct: 12 IAAFATIFFWSSSFMFIKIALNYYDSMTLSVLRYIISSFVLIFYMIMKKMRMPELKDIPI 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + ++ ++ G + T + + + +FL +
Sbjct: 72 FFCSGFTGF-ALYMITLNKGLTTLSSSTVSVIMAFAPILTSVLSVIFLKEKINLYGWICI 130
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ A + +L L L + + + A + + +
Sbjct: 131 FVSFAGIAVLMLWEGVLSVNEGVFLILTSALLLAIYNIIQKKLMRRYTASEATTYSIFTG 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA-KLSTVGIMEYT 265
+ V+++ S E F + + + + + ++S + A + + +
Sbjct: 191 TILLVLYSPKSAMEIFHMSSAGFIIVFYLAVFVGVVGYILWSKALSLAENTGEIANLLFL 250
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
P + + + IL + + I +++ ++ Y
Sbjct: 251 NPFIATIMGIIILHEKLTIPTIIGGTMILSGILGY 285
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
T + + I + + + + VL +V+ + +F
Sbjct: 14 AFATIFFWSSSFMFIKIALNYYDSMTLSVLRYIISSFVLIFYMIMKKMRMPELKDIPIFF 73
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + G+ STV ++ AP+L V SV LK+ I+ I +
Sbjct: 74 CSGFTGFALYMITLNKGLTTLSSSTVSVIMAFAPILTSVLSVIFLKEKINLYGWICIFVS 133
Query: 294 VIAMVVYLLPT 304
+ V +L
Sbjct: 134 FAGIAVLMLWE 144
>gi|256423062|ref|YP_003123715.1| hypothetical protein Cpin_4054 [Chitinophaga pinensis DSM 2588]
gi|256037970|gb|ACU61514.1| protein of unknown function DUF6 transmembrane [Chitinophaga
pinensis DSM 2588]
Length = 309
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 82/288 (28%), Gaps = 9/288 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF+F YI+WG T L + +V + + R L + + +
Sbjct: 21 LFLFAVYIIWGSTYLGMKIATEVVPPFLLSAFRFLAAGTILGLISRGSERQWPTKQQVGS 80
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
ML+ ++ + L +FV + F +
Sbjct: 81 AAFVGLMLIGIGNSCTALAVHYMPSGLVALIVAAIPVWFVGFDWAFFSKQRPTIMTFTGI 140
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ L +L H P IAV S M A+
Sbjct: 141 LVGLVGLFLLFNPFGADHQSRPYPLWPIAVLAGGCACWALGSLSVSKLSMPAPMTSAALQ 200
Query: 207 ALFYVVWNGF--------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L V+ + L + +L + + F +S+ + A
Sbjct: 201 MLTGSVFCFIVSSVMEPGAWNTLAHLSTRTISAYLYLVFIGSLVGFTSYSWLTRNAPPGL 260
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y P++ + I + + + + GIV+ +V+ L
Sbjct: 261 LSTYAYVNPVVALFLGWAIGHENLTSQALMACGIVIGGVVLMTLGKRK 308
>gi|229160014|ref|ZP_04288018.1| hypothetical protein bcere0009_8140 [Bacillus cereus R309803]
gi|228623451|gb|EEK80273.1| hypothetical protein bcere0009_8140 [Bacillus cereus R309803]
Length = 295
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 88/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + + + ++++ + T+K
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDDIEEYNLIALRFIIA--FLLSGLLFYKHLFKIDFKTVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSALFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGNVTKHVNSIALGVAQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + LI + F + + + G++
Sbjct: 185 GLFSLIFSFIIETPKLPSTIDSWLIILILSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ +
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILVSVLIAEVD 281
>gi|169632174|ref|YP_001705910.1| hypothetical protein ABSDF0179 [Acinetobacter baumannii SDF]
gi|169150966|emb|CAO99582.1| putative membrane protein [Acinetobacter baumannii]
Length = 306
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 85/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + L
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFLSVWRQRRLVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + + Y F +
Sbjct: 128 FAVFGSVLSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKKWQLPLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVLFHLPLIFWFGLDALNAQNAPSAIYAGVFASLIAPLVWMLAVQQFGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + + L + T ++++ +++
Sbjct: 248 RTSIFMNLVPVFTAIIASIWLSEQWTIYHTFGGIMILVGIIM 289
>gi|149279359|ref|ZP_01885490.1| predicted permease [Pedobacter sp. BAL39]
gi|149229885|gb|EDM35273.1| predicted permease [Pedobacter sp. BAL39]
Length = 300
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 95/296 (32%), Gaps = 3/296 (1%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ + T L + +WG T + + ++ ++++ +RVL + + ++
Sbjct: 4 TNSPDASVTKRNLLILHFTVFIWGFTGILGALIS-INAIQLVWYRVLIATSTLLLYFLFS 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + + L G +V IL H +T + + +
Sbjct: 63 KTSLRVSRRQLIQFILTGSIVAIHWILFFHAIKVSTVSVTLVCLSSFTLFTAILEPLIKK 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ + + + L II + +I I LS A+A + + +
Sbjct: 123 KKILIPDVVIGLVIILGIYLIFKFESQYTWGIILGLSSALASSLFSIINSTLVQKSEPKI 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F EM Y +++ E F L +I + + + ++
Sbjct: 183 IGFYEMAGAFFWISLYRLFDHSLLSETFTLAVNDWIWLMILGTICTALAYVAGVSVMRTL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILK--QPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V ++ P+ ++ + + + + +++ ++ Y + +
Sbjct: 243 SAFRVALITNLEPVYGVLMAFIFFGTKEQMSLGFYLGATLIIGSVFGYPIYKKRRN 298
>gi|123968453|ref|YP_001009311.1| integral membrane protein, DUF6 [Prochlorococcus marinus str.
AS9601]
gi|123198563|gb|ABM70204.1| Integral membrane protein, DUF6 [Prochlorococcus marinus str.
AS9601]
Length = 296
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 101/286 (35%), Gaps = 15/286 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + L + +++ + + E++ R L + + + +K+
Sbjct: 19 LVFASFFFSLMTLCVKNIDKRIPIFELVLFRSL--------LSLIITLLIINIKNINPWG 70
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K +L+ + + YA+ +++ + P+ ++F+ E++ I
Sbjct: 71 KNKPLLILRGFLGTLALVCIFYAIRNMPLSISTVIQYTYPIFISIFAAIFINEKITRNII 130
Query: 149 IAALLIILSLLIMTLHSGIPLLSL------AIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A ++ +L + S + ++++ + A C A + V +
Sbjct: 131 FALIIAWFGILTILNPSQLSIVNVEIEIISILIAFLGAICTALAYVTVKKLSFSEDIYVI 190
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L + ++ N + ++++G GL + G+K S I+
Sbjct: 191 IEYFPLVSFITLLPIVLINWVTPNWSELVWILGIGLFTQLGQTFLTIGLKNLPASEASII 250
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y L + + + I+ + +V++ ++ + +
Sbjct: 251 NYLQVLFGSIWGILFFSEIININFLLGASLVLLGTIISTTKIIKRT 296
>gi|194365020|ref|YP_002027630.1| hypothetical protein Smal_1242 [Stenotrophomonas maltophilia
R551-3]
gi|194347824|gb|ACF50947.1| protein of unknown function DUF6 transmembrane [Stenotrophomonas
maltophilia R551-3]
Length = 290
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/267 (11%), Positives = 75/267 (28%), Gaps = 3/267 (1%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + + ++ R+ + + + P
Sbjct: 22 GAIWGCSFLFMRVAVPSFGPFALVEMRLGLGALVLLPFLWQARAQFPPRRWLWLAP-IGL 80
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L + A + + + F + + L A +
Sbjct: 81 VNSALPFVLFAYAAERAPAAIGAICNAMTVLFAALIAFLFFGEKIGARRAGALLVGFAGV 140
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+++ + I L G +L+ A A + L+ +L+ +
Sbjct: 141 VVLATAKISGLSIGTAVLAGAAASLLYGMGVNLVKRHMTGLPSAAAAAATLSCASLWVLP 200
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ + + + F F +F I R S + Y PL
Sbjct: 201 -MALTHLPQGPIPGKAWGAAIALGVVCTGFAFLMFYRLIGRIGPSRASTVTYLVPLFGAA 259
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ L + + I +++ ++ V
Sbjct: 260 FAWLFLGEAVTVQMLIAGALILGSVAV 286
>gi|78067365|ref|YP_370134.1| hypothetical protein Bcep18194_A5896 [Burkholderia sp. 383]
gi|77968110|gb|ABB09490.1| protein of unknown function DUF6, transmembrane [Burkholderia sp.
383]
Length = 321
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 78/284 (27%), Gaps = 22/284 (7%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG+ + + L + + + + R + F + LL + +
Sbjct: 45 WGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQIPWRLLVLYGATIQLGQFVF 104
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ L S ++ +FL ERL +I +
Sbjct: 105 LFTGMYVG-----------MPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLIGLAIAA 153
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
L+++ G + +T + V G + ++ +L V
Sbjct: 154 GGLVVIAAQGGRAMTLAGFLLTICSAAMWAFGNIVTKKVGKANLVSLVVWASLVPPVPFF 213
Query: 216 FSGGEHFFL----------GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + + ++S + R + V
Sbjct: 214 LLSLWFEGPQRIATALAGLNGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVAQFSLL 273
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P++ + SS +L + + + I +V+ + V + +
Sbjct: 274 VPVVGLASSALLLDEHLTRTQLIGTALVMGGLAVNVFGGKLMRR 317
>gi|15645848|ref|NP_208026.1| hypothetical protein HP1234 [Helicobacter pylori 26695]
gi|6136615|sp|O25832|Y1234_HELPY RecName: Full=Uncharacterized transporter HP_1234
gi|2314395|gb|AAD08277.1| conserved hypothetical integral membrane protein [Helicobacter
pylori 26695]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 103/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSTLISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGIHVPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|323699299|ref|ZP_08111211.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
ND132]
gi|323459231|gb|EGB15096.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans ND132]
Length = 291
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 90/282 (31%), Gaps = 16/282 (5%)
Query: 32 CAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A IL G + + + + E++ V + R +L + + GGL L
Sbjct: 13 LAMILVGSSVVAGRIMVEELPVYLASALRFALALAILLPMLNAREGGLPSLC----RRTW 68
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ + V S + F ++ L TP + +FL++R + ++
Sbjct: 69 LKLAVQSLCGSFLFTVFLLHGLTLTGPASAGIITSTTPACMGLIAWLFLRDRPSRRVLLG 128
Query: 151 ALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L + +L++ L AV + + +
Sbjct: 129 ICLSVAGVLVINLVGTAGPGGANPVVGNLLVLAAVLFESLFLLIRKTVPEPLSPLAAATV 188
Query: 202 VLAIPALFYVVW--NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +++ + + + + + + + G+ + ST
Sbjct: 189 ISLFGLAWFLPMGVVEAARTDLAAISATGWLVIGYYGAFVTVLAYLFWFAGVTKVPPSTA 248
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G+ P+ +V S +L +P+ + G V+ +V+
Sbjct: 249 GVFTAVMPVSALVLSALVLHEPVGWQQLTGCGCVLAGIVLIS 290
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 35/129 (27%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+A+ I V + A+ + G L
Sbjct: 13 LAMILVGSSVVAGRIMVEELPVYLASALRFALALAILLPMLNAREGGLPSLCRRTWLKLA 72
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + +G+ ++ GI+ T P M + + L+ + +
Sbjct: 73 VQSLCGSFLFTVFLLHGLTLTGPASAGIITSTTPACMGLIAWLFLRDRPSRRVLLGICLS 132
Query: 294 VIAMVVYLL 302
V ++V L
Sbjct: 133 VAGVLVINL 141
>gi|311070449|ref|YP_003975372.1| putative transporter [Bacillus atrophaeus 1942]
gi|310870966|gb|ADP34441.1| putative transporter [Bacillus atrophaeus 1942]
Length = 310
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/294 (12%), Positives = 94/294 (31%), Gaps = 11/294 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + +++G +++ + E++ R L + + + K
Sbjct: 17 VLKMVISMVIFGSIGFFSEH-TNLPSFELVFVRCLCATLFLGVCWLVTGQ----FKTEKW 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + V + L +W F + + Y + PV+ + LGSV +E+LN +
Sbjct: 72 SRREVIQTLACGIFLVFNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSVIYREKLNVI 131
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIEM 200
+ + ++ +++ + S + A + G
Sbjct: 132 SVSSIIICFFGTALISGINKDMSFSQLMGSGIIWAVLAALFYAFTTLLGKGINNLSPYAT 191
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++ G L T+ + + V+ +F ++ +
Sbjct: 192 TFLQTGLGVVLLIPFIHFGLFSHLSQGNWTMVVSTGIIHTGIVYLLFFDSLRFLSTKFIS 251
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ + P + I+ D +T+ ++ M + L+ + K
Sbjct: 252 VIVFLDPAVAIILDTAFTGFRPDLFQTLGIVLIFAGMALTLVKKQRPAKAEAKK 305
>gi|227878480|ref|ZP_03996419.1| DMT superfamily drug/metabolite transporter [Lactobacillus
crispatus JV-V01]
gi|262046172|ref|ZP_06019135.1| permease [Lactobacillus crispatus MV-3A-US]
gi|227861931|gb|EEJ69511.1| DMT superfamily drug/metabolite transporter [Lactobacillus
crispatus JV-V01]
gi|260573502|gb|EEX30059.1| permease [Lactobacillus crispatus MV-3A-US]
Length = 306
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 93/295 (31%), Gaps = 12/295 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ A I+WGI+ L+ + L +++ + + R++ S +
Sbjct: 3 TQKQRRLWAFLAGLACIMWGISGLFAKSLFNTSPEITPMWLSQIRMVTSGIILLIVAGVL 62
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ A ++ + L F+ + + + FV P +
Sbjct: 63 KQ--KPIATMKNKHDAWTIIAYGIFGLLPVQLFYFIVVQQANASIATILQFVGPFFVMGY 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+V K+ + + ++AA+ + ++++ H +L +V + A
Sbjct: 121 LAVTHKQVMRRIDVLAAICAFIGVVLLATHGRFNHFALTPSVLFWGLLSAVGVATNTLIP 180
Query: 195 GFFI------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + H + + F + +
Sbjct: 181 ISVLKRVSSLVVTGWGLLSAGICLMIVHPQMPHIPNTPHVWLDVVAVIVIGTLIPFQLMT 240
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ K ST +++ P V SV + + I +VV+A + +
Sbjct: 241 NSLRFIKASTASLLDAFEPFSATVGSVICFGLVMTPMDWIGSILVVLAAMALNIS 295
>gi|222096532|ref|YP_002530589.1| transporter, drug/metabolite exporter family [Bacillus cereus Q1]
gi|221240590|gb|ACM13300.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus Q1]
Length = 303
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 88/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 294
>gi|198245152|ref|YP_002215096.1| hypothetical protein SeD_A1251 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197939668|gb|ACH77001.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
Length = 306
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 85/288 (29%), Gaps = 4/288 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 63 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIILLNSGGNLSGNPWSAILILIGSMSWAFGSVYGSRIALPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 182 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y P++ ++ + + + + G++V A+V+ L +
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGERLSPIEWAALGVIVFAVVLVTLGKYL 289
>gi|229159661|ref|ZP_04287672.1| Transporter, drug/metabolite exporter [Bacillus cereus R309803]
gi|228623812|gb|EEK80627.1| Transporter, drug/metabolite exporter [Bacillus cereus R309803]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 96/288 (33%), Gaps = 14/288 (4%)
Query: 29 FVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ LWG++ Q+L VS ++ ++ R+L + + ++ + +
Sbjct: 1 MIITGATLWGLSGPMIQWLFQHTNVSSIDFLTIRLLLAGIFILSFLLIKKQNIFQIWKHP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + + FI + + F+ PV+ + ++
Sbjct: 61 RHSIQLIIFSILG--MLGAQYAFIETVHISNAVTATLFQFLGPVLITIYVAFEQRKFPAS 118
Query: 146 LQIIAALLIILSLLIMTLHSGIP---------LLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+Q+ A + + + + I + L A+ ++ Y ++
Sbjct: 119 MQLFAIIAALTGTYFIITNGSIANIVLSKEAIIFGLLTAIGFAFYTLHPASLIKERGTTV 178
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I +L + F + + LI + + F ++ +K
Sbjct: 179 VIGWGMLIGGIALLICNRSFGWNQISQTFTLQTFSMLILIIISGTLSFLLYIGSLKYLAA 238
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ PL+ + S+ L + + + +V++++ +P
Sbjct: 239 TETSILSSIEPLVAAIVSIAWLNESFGAYQLLGGICIVLSVIFLTMPQ 286
>gi|258405396|ref|YP_003198138.1| hypothetical protein Dret_1272 [Desulfohalobium retbaense DSM 5692]
gi|257797623|gb|ACV68560.1| protein of unknown function DUF6 transmembrane [Desulfohalobium
retbaense DSM 5692]
Length = 314
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 85/291 (29%), Gaps = 13/291 (4%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG+T L+T+ L VL + R + + + T +
Sbjct: 16 LLLFVVVSWGMTFLFTKLGLPSFPVLNFAAMRTFAAAGTLTVCAGILLRHRPHSRLTRGD 75
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L F A+ + TPV + ++ ERL
Sbjct: 76 HVLALLLGGLGMGCF--PYVFSLAMSQTSAANAGLIFGATPVAVGGMSALLGLERLRAKD 133
Query: 148 IIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + ++++ S G L+ LA+ + R S F
Sbjct: 134 WLGLSCSFAGIALVSVSSLSTVGIADLQGDMLMFLAMLMWAGYTVGNRFVSESASRVHFT 193
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L ++ + T L + ++S +K+ +
Sbjct: 194 ALASLWGSTLLCLMLGPALFRFSWSTVTPSAWTGVFGAGVLGTGIAYVLWSSSVKKVGPA 253
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ PL+ V +L +P+ V V+ +V+ + S
Sbjct: 254 RTAVYMNLVPLVAAVCGAVVLHEPLRLVHLPAAVAVMTGVVLTRGQSRKRS 304
>gi|145596735|ref|YP_001161032.1| hypothetical protein Strop_4226 [Salinispora tropica CNB-440]
gi|145306072|gb|ABP56654.1| protein of unknown function DUF6, transmembrane [Salinispora
tropica CNB-440]
Length = 320
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 88/299 (29%), Gaps = 23/299 (7%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRV-LWSLPGVFFAIVYFSGGLSLLK 82
G + + + + + + + L S + RV L +L + A++ G S L+
Sbjct: 10 GLMLAVLSALTFATSGTFARSLIDAGWSAGAAVVVRVGLAALVLMVPAVLALRGRWSTLR 69
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D + + F + + F A+ + ++ V+ V + +R
Sbjct: 70 DNATS-----IGAFGLLGVVLAQVCFFNAVRYLPVGVALMLEYLAVVVVVGWMWLAHGQR 124
Query: 143 LNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L ++ +++ + L ++ +G + +L A A F +
Sbjct: 125 PRRLTVVGSIVALAGLGLVLDLAGAGRLDPVGVLWGLGAAVGLAGYFVLAGRIDANLPSV 184
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLG---------NIPDTLFLIGYGLLNSFVFCIF 247
+ +A+ A ++ + +
Sbjct: 185 VLASGGMAVGAGALLLLGLVGALPLRAYTGTVDFAGQRTSWLVPVAGLVLVAAVLAYLTG 244
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + T + ++ + +L + ++ ++V + + L
Sbjct: 245 VASTRLLGARLASFVGLTEVMFAVLIAWLVLNELPTVIQLSGGILIVAGVALVRLDEPR 303
>gi|99082508|ref|YP_614662.1| hypothetical protein TM1040_2668 [Ruegeria sp. TM1040]
gi|99038788|gb|ABF65400.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 320
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 99/303 (32%), Gaps = 24/303 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
++G L A + + + + +FL + +V+ R + +L + I+ GG+
Sbjct: 7 QSNVLGILAAIGAAVAFSVIDVTFKFLSDGYPLYQVVFIRSVVALVLLLAVIIPLEGGVK 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+L+ + T + F L F TP+I L +FL
Sbjct: 67 ILRTQNIR-----LHGLRVTAVVFANITFFSGLAVLPLAEAVAIAFATPLIVTLLSVLFL 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KER+ + A ++ +L++ A+ + +A I + G
Sbjct: 122 KERVGPWRWGAVMVGFSGILVIVKPGMAAFQPYALLPFLGSCGYATLHILTRRAGGSDKA 181
Query: 200 MCVLAIPALFYVVWN------------------GFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ P L +++ + + + + + G+ +
Sbjct: 182 ATLSFYPTLGFLIVSALAGLVFGHGQWATGVPLWDVVLKPWAWPKGIEWVIFAVAGVSGA 241
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + + V EY A L +V V + + + + +++ A +V L
Sbjct: 242 VGGYLVGQAYRLCEAGLVAPFEYVAMPLAVVWGVLVFAEWPEPSVWLGSALIIGAGLVSL 301
Query: 302 LPT 304
Sbjct: 302 WRE 304
>gi|310657468|ref|YP_003935189.1| membrane protein [Clostridium sticklandii DSM 519]
gi|308824246|emb|CBH20284.1| putative membrane protein [Clostridium sticklandii]
Length = 301
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 95/295 (32%), Gaps = 14/295 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
L + A LWG+ ++ Q L +S V RV + + + +
Sbjct: 8 YLKIALAGSLWGMIGIFVQTLRGFGLSAEFVAFSRVFLGFALLAGWFLIKDPSILKIDL- 66
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ V + + ++ F + +PV LG+ KE+ +
Sbjct: 67 ---KGLISACVIGVISQGLFNLTYFASIQRVGTFTAVVLLYFSPVFMFLLGTFMYKEKAD 123
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGF 196
+II+ L+ + L + A + A S F
Sbjct: 124 KRKIISVLICFAGCIFGVSGGDFSALKADLPGISLGLIASLSYSLMPALSKKTASSYNPF 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I + +L + + + L + + + +C++ + ++
Sbjct: 184 TIIIYSFMFGSLMLLPFAKPMNELYMLQDLRLVVLLIAFSIFVAAMPYCLYIPSLHNVQV 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
S +G++ ++ I + LK+P+ I I+++++V P V +
Sbjct: 244 SKLGVIASVELIVSIAIAAVFLKEPVRLGNLIGVAIILVSIVAMNKPPVKMIKRE 298
>gi|301121228|ref|XP_002908341.1| Drug/Metabolite Transporter (DMT) Superfamily [Phytophthora
infestans T30-4]
gi|262103372|gb|EEY61424.1| Drug/Metabolite Transporter (DMT) Superfamily [Phytophthora
infestans T30-4]
Length = 918
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/311 (7%), Positives = 73/311 (23%), Gaps = 30/311 (9%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++G + + A V + R SL
Sbjct: 564 KRQVPIIGYMLLLAALFTISSMGAALDLQRNVDPFMKLFWRTTASLIVFIPLAGAALYDR 623
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + +N S + + L ++ + + + +G +
Sbjct: 624 GLPQFSTRNMILFLTCSLSYAVFLMT----FLWALAHTSIDHAYIFNNCHSLLMVVGRLL 679
Query: 139 LKERLNHLQIIAALLIILS-----------------LLIMTLHSGIPLLSLAIAVTWSAY 181
L ++ + + + ++ ++ ++L + L A+
Sbjct: 680 LGRYVSQFEGLGTAIGVIGGALTTLDHPQASSSGAEVVQVSLAGDLVALVGAVGGALYLI 739
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL-------- 233
+ + S F +LA+
Sbjct: 740 TAKKLRTEMDISILFVGMFTLLALLIFPVFSLLEIPFEASRDPDMGLFGWLDPSRAASEA 799
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI-LKQPIDTVRTIVFGI 292
+ + +K V ++ P+L V + + + +
Sbjct: 800 YIVLICTLIGTLGYIAVMKYFAPIVVSVVMLVEPVLAAFMGVAVGVDVFPGLLTIAGSLL 859
Query: 293 VVIAMVVYLLP 303
++ + ++
Sbjct: 860 IIAGTAMVIVS 870
>gi|15598801|ref|NP_252295.1| hypothetical protein PA3605 [Pseudomonas aeruginosa PAO1]
gi|116051602|ref|YP_789559.1| hypothetical protein PA14_17660 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890170|ref|YP_002439034.1| putative transmembrane protein [Pseudomonas aeruginosa LESB58]
gi|254236521|ref|ZP_04929844.1| hypothetical protein PACG_02518 [Pseudomonas aeruginosa C3719]
gi|254242303|ref|ZP_04935625.1| hypothetical protein PA2G_03044 [Pseudomonas aeruginosa 2192]
gi|9949762|gb|AAG06993.1|AE004781_1 hypothetical protein PA3605 [Pseudomonas aeruginosa PAO1]
gi|115586823|gb|ABJ12838.1| putative transmembrane protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168452|gb|EAZ53963.1| hypothetical protein PACG_02518 [Pseudomonas aeruginosa C3719]
gi|126195681|gb|EAZ59744.1| hypothetical protein PA2G_03044 [Pseudomonas aeruginosa 2192]
gi|218770393|emb|CAW26158.1| putative transmembrane protein [Pseudomonas aeruginosa LESB58]
Length = 308
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/299 (9%), Positives = 72/299 (24%), Gaps = 1/299 (0%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + + ++WG++ + + ++ + R + + ++ S
Sbjct: 10 RAMRSQALRADVLMLITAMIWGVSFVAQRLGMDAIGPFLYTGLRFVLGALVLVPLLMLRS 69
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
A +L + T + + Y + + L
Sbjct: 70 RRDGAQPFNRGQLLAGVILGVALTTGINLQQVGLLFTSVTNSGFITGLYVIVVPLLGLLF 129
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+A L + L + + +
Sbjct: 130 GQRTGAGTWLGASLAVLGMALLSIGPGFQVASGDWLQLAGAVVWGAHVLLVGLFASRYDP 189
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ A A ++ H+ L G L F + K A
Sbjct: 190 IRLAFLQFATCAAVSLLLALVFEEIHWDAIVQAGPALLYGGLLGVGTGFTLQVVAQKHAI 249
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S I+ + ++ L + + +++ M+V L + + +
Sbjct: 250 ASHAAIILSLEAVFAAIAGALFLAETLHLRGYFGCALMLAGMLVAQLWPRKLAAEARPA 308
>gi|107027533|ref|YP_625044.1| hypothetical protein Bcen_5197 [Burkholderia cenocepacia AU 1054]
gi|116693755|ref|YP_839288.1| hypothetical protein Bcen2424_5662 [Burkholderia cenocepacia
HI2424]
gi|105896907|gb|ABF80071.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia AU 1054]
gi|116651755|gb|ABK12395.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia HI2424]
Length = 288
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 90/284 (31%), Gaps = 12/284 (4%)
Query: 28 LFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ C ILWG + + Q L VS ++R L +F ++ +
Sbjct: 9 FALVCVTILWGWSFVAIHQSLGFVSASTFNAYRFLIGAAAMFIVLMRRWRHVEWRAGRRA 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L + + F + SF + + + G LK R +
Sbjct: 69 ILP--------GVVLFIAFAFQTAGIAYTTASNASFITGLAVIFAPAFGYWMLKIRPSRQ 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI---AVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q+I A + + L ++T+ + A+ ++A + ++ + +
Sbjct: 121 QVIGAAIAAVGLAMLTMRDLSIHVGDALVLGCAVFTALHIVVLSKRSKGADVELLAFIQV 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + ++W+ P +I + + + + + + ++
Sbjct: 181 LVVGVLSLLWSLAFHEFSVPNSPQPVWTAIIVGIGGTAIGYFVQTRAQVESAPGRIALIL 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
P+ + + + ++ +++ AM V +
Sbjct: 241 VLEPVFGGLFGYVLGGDRLSSMNFAGAALIIAAMFVTEYRPRLR 284
>gi|311032208|ref|ZP_07710298.1| hypothetical protein Bm3-1_16999 [Bacillus sp. m3-13]
Length = 300
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 100/284 (35%), Gaps = 12/284 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ A +LWG T F + + + + R+ + + G LK
Sbjct: 8 FLILFAAVLWGTTGTAQTFAPEAAHPVAIGAARLAGGGVFLLILVFLTGG------LNLK 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + ++ FF +T T + PV+S FL +FLK R + +
Sbjct: 62 NWPIRATFLAALSMALFQPLFFTAVTVTGVAIGTVVAIGSAPVLSGFLEWLFLKRRPSKI 121
Query: 147 QIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L +L +++ L+ + +A+ S +A + + +
Sbjct: 122 WWSSTFLSVLGCMMLFLNKDSVVVDPIGVLMALGAGLSFAVYAIVSRDLAGKFPSLSIVA 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ + ++ + + L + + +F+ G+ ST
Sbjct: 182 VVFTLSAVFLAPFMLVFDMTWVTDVRGWGIVLYLGVMTTGVAYILFARGLMHVSSSTAVT 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ PL + VF+L + ++ + I ++++ + V + +
Sbjct: 242 LALAEPLTAALFGVFLLGENLNIMSWIGMVLMMLGIGVLIGASR 285
>gi|303249336|ref|ZP_07335566.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
gi|302489268|gb|EFL49228.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
Length = 291
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/278 (9%), Positives = 80/278 (28%), Gaps = 10/278 (3%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ +W + L + L+++ + L S + + +L + +
Sbjct: 10 YGLATVAMWSTVATAFKLSLAHLDPLQLLLYASLSSCLALAATLAVRGKLGALTRLSRAQ 69
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K L A +++ A + + L L ++L
Sbjct: 70 WKRSFAL--GALNPFLYYTILFAAYDLLPAQEAQPLNYTWAITLSLLAVPLLGQKLRGRD 127
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++A ++ +++++ H I + A +A+ + + +
Sbjct: 128 LLALVVSYSGVVVISTHGDILGMRFASPSGVALALASTVIWALYWIAGTKDDRDPVVGLL 187
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI-KRAKLSTVG 260
+ +L + + F F + + + V
Sbjct: 188 ANFLCSLPLTLLAVLCFSDPFPGSLAGLGGAAYVGVFEMGLAFVTWLTALKCAVNAARVA 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + +P L ++ F + + I + +++ +
Sbjct: 248 NLIFLSPFLSLILIHFFVGEEILPSTMVGLVLILAGLA 285
>gi|294853485|ref|ZP_06794157.1| hypothetical protein BAZG_02450 [Brucella sp. NVSL 07-0026]
gi|294819140|gb|EFG36140.1| hypothetical protein BAZG_02450 [Brucella sp. NVSL 07-0026]
Length = 299
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 90/287 (31%), Gaps = 10/287 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S + + I G +P++ + L +V L + R+ ++ +
Sbjct: 12 SSQQRWAMIALITGGIAIGSSPIFVR-LSEVGPLAIGFWRLALAVLPLLLMDGRERHERK 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +A G + +L + + + P+ +
Sbjct: 71 DAAPLTLADCLRLALP--GFFIAADLGAWHLSLHSTSVANATLLANMAPIFVTIGAWLLF 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ R++ I+ ++ + ++++ G L +A + A
Sbjct: 129 RSRVSSSFIVGLVVAVAGVIVLKGGPGELLHSRSSGDAMALLAAVFYAGYILSVGRLRSR 188
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + AI A+F + F G + L ++ + +Y +
Sbjct: 189 FSTMRIMLWSSAIAAIFSLPVAYFMEGHILPATLYGWLVLAGLAWLTHAAGQSMIAYALA 248
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + P++ + IL +PI ++ I IV+ +++
Sbjct: 249 FLPASFSSLTLLLQPVVAAFLAWTILSEPIGLMQAIGGVIVISGILI 295
>gi|229156264|ref|ZP_04284360.1| Uncharacterized transporter [Bacillus cereus ATCC 4342]
gi|228627139|gb|EEK83870.1| Uncharacterized transporter [Bacillus cereus ATCC 4342]
Length = 304
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ SVF+ E++ I
Sbjct: 72 ---IFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F ++ + + +
Sbjct: 129 GGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFVAWIWLGEVPTLVS 271
>gi|222102789|ref|YP_002539828.1| regulator protein pecM [Agrobacterium vitis S4]
gi|221739390|gb|ACM40123.1| regulator protein pecM [Agrobacterium vitis S4]
Length = 307
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 74/280 (26%), Gaps = 2/280 (0%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L ++WG T L T + + ++ L +LP ++ L
Sbjct: 4 KSRQRFDLLITALVPLVWGSTYLVT--TQFLPPGIPLTAAALRALPAGLILVLLQRKMLQ 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
V + L + + + + I
Sbjct: 62 GHWWWRAALLGVLNIGAFFYFLFLAAYHLPGGIAALLMSIQPVIVLIYSAILFRNPVRAT 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + L+ L +M G+ + A+K + +
Sbjct: 122 QILACLCAALGVALVALRSDVMLNTQGVTAGLAGAFSMATGMVLAKKFGRPDNMSLLALT 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L L V + + L L + ++ GI R TV
Sbjct: 182 GWQLTFGGLALVPFALMTESFPETLTLRNIGGLSYLSLLGALVTYALWFRGIARLPALTV 241
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +PL + L Q + ++ +V++++ +
Sbjct: 242 SFLSLLSPLTAAILGAIFLGQTLTWIQFGGGMLVLVSVYL 281
Score = 35.7 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 7/82 (8%), Positives = 24/82 (29%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
L + L F ++ P+++++ S + + P+
Sbjct: 59 MLQGHWWWRAALLGVLNIGAFFYFLFLAAYHLPGGIAALLMSIQPVIVLIYSAILFRNPV 118
Query: 283 DTVRTIVFGIVVIAMVVYLLPT 304
+ + + + + L +
Sbjct: 119 RATQILACLCAALGVALVALRS 140
>gi|222109584|ref|YP_002551848.1| hypothetical protein Dtpsy_0364 [Acidovorax ebreus TPSY]
gi|221729028|gb|ACM31848.1| protein of unknown function DUF6 transmembrane [Acidovorax ebreus
TPSY]
Length = 295
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/293 (9%), Positives = 81/293 (27%), Gaps = 8/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGG 77
+ + G A + + T+ + + L + R ++ ++ S
Sbjct: 9 SPRTALAGIALTVGACASFALLDTATKLVSATTPLLLALWLRYVFQSLVTSAYVLPRSDW 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
D + A + A F I+++ + TP+ + ++
Sbjct: 69 RPPRTDHPRYQLLR------AVLFAATSLFGIFSIRAMPLAEFTAIVAATPLCVTLVAAL 122
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L++ ++ L+ + + S+L++ G + + C I G
Sbjct: 123 WLRQPVSALRWLLVATGLASVLLILRPGGQSFSGVLVLPLGMLACGTGYQILSSRMAGQE 182
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG-LLNSFVFCIFSYGIKRAKL 256
+ + + + L ++ + A
Sbjct: 183 APTTTQFYTSWIAAGLMTLAAPFVWTAITSAWVWLGLVVMGLSSALGHLLLLRAYACAAP 242
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+T+ YT +++ + D + ++ + TV
Sbjct: 243 ATIAPFLYTQIAFAMLAGWAVYGHMPDRWSLLGICLIAASGAASAWLTVRERR 295
>gi|205356861|ref|ZP_02342717.2| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205325591|gb|EDZ13430.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 315
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 48/304 (15%), Positives = 104/304 (34%), Gaps = 12/304 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIV 72
E T G L V A +LWG + + Q++ + +S + R+L++ G+
Sbjct: 12 NEEKMGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVTF 69
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F G + A+ +L+FS F+ + + F++P I V
Sbjct: 70 SFMHGDKIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIV 129
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFAR 185
++ + R L + A L ++ ++ H L IA ++A +
Sbjct: 130 AWFALARRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSAALFWGIASAFAAAFYTT 189
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + G + ++ G HF + F + S F
Sbjct: 190 WPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFS 249
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ G + I+ PL + S+ +L + +++ ++++ L +
Sbjct: 250 LYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSR 309
Query: 306 INSG 309
+
Sbjct: 310 RRAR 313
>gi|157962899|ref|YP_001502933.1| hypothetical protein Spea_3081 [Shewanella pealeana ATCC 700345]
gi|157847899|gb|ABV88398.1| protein of unknown function DUF6 transmembrane [Shewanella pealeana
ATCC 700345]
Length = 304
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 98/298 (32%), Gaps = 10/298 (3%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A LW + L + L+++ V+ S+ + ++ + + L
Sbjct: 8 YLFGIGAIFLWSTVATAFKLALAHYTPLQLVFVAVITSIFALGAILIAQRKLPLIKQQFL 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P +++ A + ++ L L + L
Sbjct: 68 ERPWFYL--QTGLLNPFLYYLVLFKAYDLLPAQQALSLNYTWAILLPLLSVPLLGQALRK 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIE 199
I AAL+ + + I + +A+T + + +
Sbjct: 126 SDITAALVAYCGVFFIATKGNITGVQFESMTGVALALTSTVLWSLYWIVNTKDKGDPVVS 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK-LST 258
+ + + L ++V + F ++ +K+A+ ++
Sbjct: 186 LLLSFLVGLPFIVVALLMTQSLPAWDLKALFAGVYVGLFEMGVTFVLWLVALKKAERTAS 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + + P++ I +IL++ I+ I G+++ A+V+ + + + + + S
Sbjct: 246 ISTLVFITPVMSIGFIAWILQESIEKSTYIGLGLIIFALVLQQILPKVGQWRTRKRIS 303
>gi|17548354|ref|NP_521694.1| hypothetical protein RS02987 [Ralstonia solanacearum GMI1000]
gi|17430600|emb|CAD17284.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 316
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 80/293 (27%), Gaps = 7/293 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S + G F+ A + + T+++ V V+ + R L+ + ++
Sbjct: 21 TRSQHPLQGIAFLIAAVAFFAVFDTLTKYISITVPVVMALWFRYLFQMVATGATLL---- 76
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L + + V +L + F +L + +TP++ F+ +
Sbjct: 77 --PSRGRSLLRTRRPWLQVVRGLLLLLVSLFSFLSLRRMPVGDVTAIVMLTPLVVTFVAA 134
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V L E+++ + I L++ G + A +
Sbjct: 135 VSLGEQVSATRWIFMAGGFFGALMVIRPGGAAFDWGMLLPLGMVVANAAFQVVTSRLANV 194
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + LI G+++S + RA +
Sbjct: 195 DEAGTTQFYTGAVGALLLTCMLPFGWQALGGKWWWLLILIGIVSSSGHALLIMAYTRAPV 254
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + Y ++ + D I+ +
Sbjct: 255 AMLTPYLYMQIGFAMIGGWLVFSHVPDGWSVAGIAIIAMCGAAGTWVAARERR 307
>gi|297581872|ref|ZP_06943793.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297533966|gb|EFH72806.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 305
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSRLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACALSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGIVVQQWQGRKAQ 295
>gi|116050562|ref|YP_790619.1| hypothetical protein PA14_30790 [Pseudomonas aeruginosa UCBPP-PA14]
gi|313107485|ref|ZP_07793672.1| putative permease [Pseudomonas aeruginosa 39016]
gi|115585783|gb|ABJ11798.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14]
gi|310880174|gb|EFQ38768.1| putative permease [Pseudomonas aeruginosa 39016]
Length = 299
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 94/283 (33%), Gaps = 11/283 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
P GTL + A ++ G L VL+V+ R ++ + A L
Sbjct: 4 PIRRGTLEMTSAMLICGTIGWLV-LLSGQPVLDVVFWRCVFGFAALLVACAVLG----FL 58
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +A + + S + +W + + + Y V P + V LG+ FL E
Sbjct: 59 RRGSLGREAFLLALLSGVFIVGNWVLLFASYSRASIAIGTAVYNVQPFMLVGLGAAFLGE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIP------LLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ ++ L +L + G L + +A +A + V +G
Sbjct: 119 KVTARKLGWLGLSFAGMLAIVSAHGDSDAPRGDYLFGILLALAAALLYAFAALIVKRLQG 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + G P + ++ + I++
Sbjct: 179 TPPHLIALIQVGTGVLMLAPLANLAELPRGVAPWASLATLGIVHTGLMYVLLYGAIQKLP 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ G + + P+ I+ + + + + + +++A
Sbjct: 239 TALTGALSFIYPVAAILVDWLVFEHRLSLAQWLGVAAILLAAA 281
>gi|331001407|ref|ZP_08325027.1| putative membrane protein [Parasutterella excrementihominis YIT
11859]
gi|329568289|gb|EGG50100.1| putative membrane protein [Parasutterella excrementihominis YIT
11859]
Length = 292
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 82/287 (28%), Gaps = 3/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ ++G LF+ + +L+ +T Q E + + + R+ +F ++
Sbjct: 1 MRNLIGPLFLLVSCLLFSVTGTLQQLAPEGHTPVVITEVRMFLGALTIFLWCLWTHRLPP 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
P + + L + + + + V++ L
Sbjct: 61 NWSAVPWKPMLIAVASVLLYQLLFFYSVAEVGVAVGSVVAIATTPLWAAVVAFLLFKKTP 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ +A + ++L S L + +T + E
Sbjct: 121 SKFWVVATALAIVGVLLINFGEGFQSQSADWRLLLPITAGLCYGVEIIAVGQVVKKINPE 180
Query: 200 MCVL--AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+L ++ + + L + + F+YGIK
Sbjct: 181 TTMLLEMGLVAVLLLPVTILFPTDWIFTTRGILVSLGLGVVTAGIAYPCFTYGIKYTSPV 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ T PL+ +F L + + ++ +++V +
Sbjct: 241 VASTLALTEPLMAAALGIFFLHENPSISMGLGMLSLMASVIVLIFEE 287
>gi|299529885|ref|ZP_07043316.1| hypothetical protein CTS44_03893 [Comamonas testosteroni S44]
gi|298722132|gb|EFI63058.1| hypothetical protein CTS44_03893 [Comamonas testosteroni S44]
Length = 349
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 73/279 (26%), Gaps = 8/279 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + A +L+G + LE S + L S G+ +
Sbjct: 7 RGVVAALGAAVLFGAGTPAVKMLLEHASPWLMAGILYLGSGIGLLIYRLITK----APAV 62
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
LK + + + + L S V++ L KE
Sbjct: 63 ALKRHEMGWLAAAVIAGGMMGPLLLMTGLSGMAATDASLLLNAEGVLTAVLAWFVFKENF 122
Query: 144 NHLQIIAALLIILSLLIMTLHSGI---PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + + I+ ++++ S L + + S +
Sbjct: 123 DRRIALGMVAIVAGAVVLSWPSQTSTASLWPTLAVLGACLSWAIDNNLTRKVSIADASFI 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ A + L + L +F ++ + G
Sbjct: 183 AMMKGLAAGATNLLLALATGAVWPSPGVVALGAVIGFLSYGTSLVLFVIALRYLGTARTG 242
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
AP V ++ L +P + ++ I + +
Sbjct: 243 AYFSIAPFFGAVLAIAFLGEPASPRLLVAGVLMGIGVWL 281
Score = 38.7 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 11/117 (9%), Positives = 34/117 (29%)
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + + + + + +++ + L +
Sbjct: 28 MLLEHASPWLMAGILYLGSGIGLLIYRLITKAPAVALKRHEMGWLAAAVIAGGMMGPLLL 87
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ + ++ +L V + F+ K+ D + +V VV P+
Sbjct: 88 MTGLSGMAATDASLLLNAEGVLTAVLAWFVFKENFDRRIALGMVAIVAGAVVLSWPS 144
>gi|270262646|ref|ZP_06190917.1| transporter DMT superfamily protein [Serratia odorifera 4Rx13]
gi|270043330|gb|EFA16423.1| transporter DMT superfamily protein [Serratia odorifera 4Rx13]
Length = 294
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 124/296 (41%), Gaps = 7/296 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSL 80
+ G + A +L+ + YT L + +V R L ++P + +++ +
Sbjct: 2 IKGIVLSVVASVLFAVMYYYTSTLAPLDGEQVFGWRTLLTVPFLTLFMIFSADWRRVSET 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ + P+ + L S+ +L V F++A L + S YF+ P+ V G V +
Sbjct: 62 LRWIKQRPRRLLFLPLSSALLGVQLWLFLWAPLHGKALEVSLGYFLLPLTMVLAGRVIFR 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+RL+ LQ +A I+ + G+ +L +A+ + Y R+ + G + E
Sbjct: 122 DRLSLLQKLAVGCAIIGVGNELYQVGGVSWATLVVALGYPVYFILRRHFGTDNLGGLWCE 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ A ++ G +G + + + + G+L++ + + S
Sbjct: 182 LALMLPVAGWFA--FGGNGPQAALATHPLLYVQIPLLGILSASALVCYILASRLLPFSLF 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
G++ Y +++V +L + I + + + +A+++ + + + + K
Sbjct: 240 GLLSYVE-PVLLVVVALLLGESIGRDEWLTYIPIWLAVLLLVAEGTRHLLRRRQIK 294
>gi|229150888|ref|ZP_04279099.1| Uncharacterized transporter [Bacillus cereus m1550]
gi|228632448|gb|EEK89066.1| Uncharacterized transporter [Bacillus cereus m1550]
Length = 304
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 82/263 (31%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ L SVFL +++ +
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILASVFLNDKMKLNGWL 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVISFTGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLLFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|188026178|ref|ZP_02961159.2| hypothetical protein PROSTU_03154 [Providencia stuartii ATCC 25827]
gi|188021919|gb|EDU59959.1| hypothetical protein PROSTU_03154 [Providencia stuartii ATCC 25827]
Length = 344
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 91/284 (32%), Gaps = 11/284 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M LF A +LW + + + IS W+L + L
Sbjct: 36 MKNLLFPLIAVLLWSMNAIVNKAAATAIDPAAISF-YRWALALLVMTPFVLRSVLRHWSI 94
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K+ + + A + ++ YA + + P+++V + L+
Sbjct: 95 VRKHWW--QLAILGALGMMLYQSLAYYAAHSVSATFMGIMNSLIPLLTVVISIFVLRVIP 152
Query: 144 NHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
I LL + L + G+ L + + +AY + +
Sbjct: 153 TVGIFIGTLLSLAGLTWLVSQGNPATLFSQGLGTGELLMLIASAAYALYGVLTKRWAIQL 212
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + ++ F + L L + ++ G+ R
Sbjct: 213 SSWDSLYVQVFFGVILLIPNFLLADDVSLNRHNIGLVAFAGIAASILAPALWIQGVMRLG 272
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+T I AP+ + ++F L + + + I G+V++ +++
Sbjct: 273 ANTTSIFMNLAPVFTAIIAIFALGEELQSYHLIGGGVVLLGVML 316
>gi|241113486|ref|YP_002973321.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240861694|gb|ACS59360.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 305
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/284 (16%), Positives = 96/284 (33%), Gaps = 8/284 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
NA M G L + +L+ + ++L +V +V+ R + + + I+ G
Sbjct: 9 NAGNLIMTGVLLMLLGDLLFALNDAMGKWLVASFAVGQVLVIRSVGAFIVLGPMIL-RQG 67
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L+L + K + + + + + + A+ Y P+ L
Sbjct: 68 PLALFRVEQKGLQFIRVFMATCDVALF-----YAAVAYLPLADVMTFYMAGPIYIAALSH 122
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
FL E++ + +A L+ ++I S L ++ + FA +
Sbjct: 123 FFLGEKIGWRRWLAVLIGFAGVVIALRPSTAMLSLPSLFGLAGSLAFALSLVMSRYLRST 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V V S I + L+ ++ + + + +K A
Sbjct: 183 SDTTLVTWQTIAALVTGIALSISHWQPATLIDWSGMLLLG-IVATCAHLLITRSLKLAPA 241
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
S + ++YT L I+ DT + I+V+A +
Sbjct: 242 SLLAPLQYTLLLWAIILGYLFFNDVPDTQIIVGAAIIVVAGLFI 285
>gi|84502436|ref|ZP_01000572.1| hypothetical protein OB2597_20511 [Oceanicola batsensis HTCC2597]
gi|84389248|gb|EAQ02045.1| hypothetical protein OB2597_20511 [Oceanicola batsensis HTCC2597]
Length = 302
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 91/297 (30%), Gaps = 18/297 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +G + A + + ++ L + EV R + + + L
Sbjct: 1 MDVRIGMAVMCLAMVFLPLGDAISKSLTVHATPFEVTVWRSVVQAAFLLPCALLLRRHL- 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K SA ++ V I A T +FV P++ L FL
Sbjct: 60 ------KGSVLSLGSFLSACLILVVTLSLITAFATMPIATAISIFFVEPLLLTLLAGPFL 113
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E + A + ++ L++ + + + + +A +A I + S
Sbjct: 114 GEVPGWRRYAAVGVGLIGALVVIRPNFVTFGPVVLLPLLAALAYALNMIVMRKSTRTRSA 173
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLG---------NIPDTLFLIGYGLLNSFVFCIFSYG 250
+ L+ + + G L+G G L F + ++
Sbjct: 174 LSFQFGATLYAAGLALLAHQAMTWTGQEMAGLAALPSWGPWALVGAGALAMVTFLMITFA 233
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVI 306
+ + S + +Y + + + D++ + I++ + V+ V
Sbjct: 234 FSKVEASLLAPFQYLEIVGATAVGYLVFSEFPDSMTLLGTAIILASGIYVFHRERVR 290
>gi|315634845|ref|ZP_07890127.1| integral membrane protein [Aggregatibacter segnis ATCC 33393]
gi|315476397|gb|EFU67147.1| integral membrane protein [Aggregatibacter segnis ATCC 33393]
Length = 287
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/283 (9%), Positives = 79/283 (27%), Gaps = 2/283 (0%)
Query: 29 FVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVF-FAIVYFSGGLSLLKDTLK 86
++ A LW + + ++ + + ++ R++ + VF + + ++ +
Sbjct: 3 YILIALFLWSSSFVAGKYTYSMLDPVLMVQMRLIIASFIVFPMFVRVWKRVPKTVRPQVW 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + T G +
Sbjct: 63 WLGFLNYPAIFLLQFIGLSHTSASSASTMLGLEPFLVVLIGHFFFGDKAKTHHWIFGLVA 122
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ LLI + L L + ++A + I V + + ++
Sbjct: 123 FLGVVLLIYGGEETGNISLFGCSLVLLAGIVFAACLRWTQRIIVQLTAQVYTTSSIVLGT 182
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ + L + + +++ GI + GI+
Sbjct: 183 ITCLPFTLWLTQSWEIHWNWLGLAGLLYIGIGCSWLAYYLWNKGINSVDSNLAGILVSLE 242
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ I+ +V +L + I + + VV ++ + +
Sbjct: 243 PVFAIILAVLLLGENISPLSWLGILAVVSTTLISSIYPRLLRR 285
>gi|281426156|ref|ZP_06257069.1| putative membrane protein [Prevotella oris F0302]
gi|281399732|gb|EFB30563.1| putative membrane protein [Prevotella oris F0302]
Length = 294
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/289 (10%), Positives = 91/289 (31%), Gaps = 6/289 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G + + +G PL++ + + ++ +R ++ + ++Y
Sbjct: 2 MQNSKLKGYVEAIISSATFGTIPLFSIPVLAAGMQISSLLVYRFGFACLLMMIILIYNGK 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L L + +L + I V+ ++ + + + + I
Sbjct: 62 SLRLTFGEGLRLSFMALLYAVSAICLVNGYNYLPSGVATTLLFSYPVFTAILEIIFSHHR 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLH--SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L L+ + +A + ++ ++ S + LL + A +
Sbjct: 122 LTLPIALSIMLAVAGVAMLSGIITNGFDVKSSVGLLLELSSGLLYAIYMVAYPNMKIKNM 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFL--GNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + A+ + + L+ + + +K
Sbjct: 182 GSLKTNFFVFLMAMMLLALYSLFTTGYIQPIGNINVFFYLLLLGFIPTTISNVTLVMAMK 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++V + PL + + + +P+ I F ++V A+ + +
Sbjct: 242 NIDSTSVATLGAFEPLTAMAIGILVFGEPMTWCVGIGFVMIVSAVYILI 290
>gi|238753790|ref|ZP_04615151.1| hypothetical protein yruck0001_9010 [Yersinia ruckeri ATCC 29473]
gi|238708026|gb|EEQ00383.1| hypothetical protein yruck0001_9010 [Yersinia ruckeri ATCC 29473]
Length = 342
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/308 (12%), Positives = 99/308 (32%), Gaps = 35/308 (11%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
G L + IL T + + L + + R + ++ +
Sbjct: 20 RRQGYLLAITSAILLAFTGIIIRVLTDDYHLPTSVLAFWRAALVAVVLLPVLLLIRPAWA 79
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + V +LA+ G + +++ +++ + + +VFLG +F
Sbjct: 80 KL-----HWQQVPFYAGYGLLLAIFNGLWTESVVLNGASISTILLYCSVGFTVFLGWIFY 134
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS------------------GIPLLSLAIAVTWSAY 181
+E L+ ++ + +L +++ S GI +A +
Sbjct: 135 QEYLSWGELGVIAVSLLGCFLVSNGSNLTAAEFNLIGLGVGLLSGIGYSFYTLAGRIATE 194
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN---------GFSGGEHFFLGNIPDTLF 232
+ GF ++ L + F + L
Sbjct: 195 RNYPVWNTILYVFGFSAVYQLIFNQMLLWFPLPVLQSMVGDIWFFSHGSEGVDWRGWGLL 254
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
L+ F +++ +K L+ ++ + V + F+L + + ++ I G+
Sbjct: 255 LVLAAGPTLLGFGLYNLSLKTLPLAVASLILSMELVFTAVLAYFLLNERMSLLQMIGSGL 314
Query: 293 VVIAMVVY 300
V+ +++
Sbjct: 315 VMGGVLLL 322
>gi|229543180|ref|ZP_04432240.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
gi|229327600|gb|EEN93275.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
Length = 294
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 95/271 (35%), Gaps = 10/271 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+ +++G ++++ + LE++ R + + + + + K +
Sbjct: 11 ISMVIFGSIGFFSKY-TGLPALELVFVRCVSASAILAVYWLATGQYKKERW----SIKEM 65
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
++ L ++W F A Y P+I + G +E+ ++A
Sbjct: 66 LFILGGGVTLVINWLFLFLAFEKTSVTAAISIYNTAPLIVLVAGWTLFREKFQWGGLLAT 125
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK-----TIPVGSSEGFFIEMCVLAIP 206
L + +++T+ + + + + A+C A I + + L
Sbjct: 126 LAAFIGTIMITVTASSAFSHVLLVGSVYAFCAAIFYAGTVMIGTRIKQASPYLVTFLQTF 185
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
++ ++ L T L+ + V+ +F I+ + S + + Y
Sbjct: 186 IGVIMLAPFVDFSKYTGLTPENWTFSLLTGVIHTGIVYLLFYGSIRFLRTSVISALSYLD 245
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
P + I+ +FI ++ I+ +A+
Sbjct: 246 PCVAILLDIFITGFAPSYMQAAGIAIIFLAV 276
>gi|126658781|ref|ZP_01729925.1| hypothetical protein CY0110_08016 [Cyanothece sp. CCY0110]
gi|126619879|gb|EAZ90604.1| hypothetical protein CY0110_08016 [Cyanothece sp. CCY0110]
Length = 336
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 47/313 (15%), Positives = 104/313 (33%), Gaps = 27/313 (8%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL----------PGVFFAIVY 73
M G ++ +++ + T+ L ++ +I R S V VY
Sbjct: 1 MSGRFYLLVGVMIFAVANSVTRKLTEIGAQNLIDGRNPISFCNVLFVGNLCALVALLGVY 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ L +L+ + A+ F AL + P + +
Sbjct: 61 YPQLKKTAFKNLSLRNWGYLLLVALLSGALAPALFFSALERTAVNNVILVSRIEPPLILG 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMT--------------LHSGIPLLSLAIAVTWS 179
L VFL R+N + A++ L +++ GI L A S
Sbjct: 121 LSVVFLGARVNRWVVSGAIVSTLGVILTVVLQPPQGDMIEMSGFQLGIGELMAAGGAVSS 180
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL---GNIPDTLFLIGY 236
A + + + F + A+ + + V G+ F+ + ++
Sbjct: 181 AIANIISKVSLQNISLGFFNVIKTALGTVIFFVIALLLYGKEHFMDISSPLLWKWMIVYG 240
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
++ + G+KR S V + P+ ++++ IL + T + + ++V+
Sbjct: 241 TIIVVVGQLCWFAGLKRTSASEVSLANAFNPIAGVLAAFLILGEIPTTAQYLGGLVIVLG 300
Query: 297 MVVYLLPTVINSG 309
++ + V +
Sbjct: 301 IIFNQIGIVQQNK 313
>gi|118478371|ref|YP_895522.1| DMT family permease [Bacillus thuringiensis str. Al Hakam]
gi|118417596|gb|ABK86015.1| permease, drug/metabolite transporter superfamily [Bacillus
thuringiensis str. Al Hakam]
Length = 321
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 89/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 18 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSL 77
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 78 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 132
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKT 187
+ER + I +++ + + L + A W Y +
Sbjct: 133 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 192
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S L + + + + F ++
Sbjct: 193 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMLSWGSLAYSIIFATIFGLAMW 252
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 253 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGLKK 312
>gi|308062513|gb|ADO04401.1| hypothetical protein HPCU_06275 [Helicobacter pylori Cuz20]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 102/302 (33%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + I V+ +
Sbjct: 116 LLKEKLKKSALISACIGLVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFMDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|299530539|ref|ZP_07043959.1| RarD protein, DMT superfamily transporter [Comamonas testosteroni
S44]
gi|298721515|gb|EFI62452.1| RarD protein, DMT superfamily transporter [Comamonas testosteroni
S44]
Length = 296
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 122/296 (41%), Gaps = 7/296 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLL 81
G + A +L+ + FL + ++ RVL +LP + LL
Sbjct: 3 KGVVVSVLASVLFASLYYLSPFLAPLDGEQIFGWRVLVTLPFTTALLFALKEVAAVRDLL 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L P+ +LV SA +L V F++A + + S YF+ P++ V G V E
Sbjct: 63 ARALAQPRFGMLLVLSAALLGVQLWIFMWAPMNGRALPVSLGYFLLPLVMVVAGRVLFAE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL Q +A LL + G+ + +A+ ++ Y R+ + + G +I+M
Sbjct: 123 RLTLGQSLATLLAAAGVAHEFWQAGGMSWETWVVALGYTVYFSLRRWLQTDTLAGHWIDM 182
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L A+ + + S L G++++ ++ + L G
Sbjct: 183 ALLVPVAIAFTLRTPDSWPLVAGHPT--LWGLLPLLGIVSAVALALYMIASRWLPLGLFG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++ Y P L++V + L + ++ + + + ++ A+ + + + +S + ++ S
Sbjct: 241 LLSYVEPALLVVVAWL-LGESMEPQQQLSYALIFAAVGLLIGDGLRHSWRGRSHTS 295
>gi|229163771|ref|ZP_04291716.1| Transporter, EamA [Bacillus cereus R309803]
gi|228619738|gb|EEK76619.1| Transporter, EamA [Bacillus cereus R309803]
Length = 301
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/282 (9%), Positives = 89/282 (31%), Gaps = 14/282 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + I+WGI ++ L + + +E + R++ + P + + ++
Sbjct: 8 LLILSVVIIWGINFTIAKYGLLEFTAIEFTALRMISAAPLMLLLTFFI-----EKSVYME 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+++ S + ++ F+ + S ++P+ + +E+ +
Sbjct: 63 RKDIPRLIIVSIVGIVLYQTLFMETVKYTSATNASLLISISPIFTTVFAIFLKQEKFSSR 122
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + +++ ++ + G + + A I S+
Sbjct: 123 KFVGSIIAFAGAALVLVAGHSLASSFYGNGIGLITSICWGLYPVLASPLIKKYSALRVTA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ L + + L + F ++ G+++ S
Sbjct: 183 WSALVGAIPLLLLSGPYVFIMPFHITHGMTLFALLYSIFFVTVFGLVMWYVGVQKIGASH 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ Y PL+ ++ + + + + I I+ +
Sbjct: 243 TMVYMYITPLVAVLFAAVWANEYVSFQQIIGGMIIFFGLWFV 284
>gi|227823078|ref|YP_002827050.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
gi|227342079|gb|ACP26297.1| putative transmembrane protein [Sinorhizobium fredii NGR234]
Length = 281
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/278 (11%), Positives = 87/278 (31%), Gaps = 10/278 (3%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + +P++ + L +V + RV +L +F + +
Sbjct: 3 ALLVGGVAIAGSPIFVR-LSEVGPMATAFWRVALALIPLFAWSWLGKDASADRRPE--RV 59
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+LV LA+ G + +L + + PV + ++ + +
Sbjct: 60 SDYALLVLPGVFLAIDLGAWHLSLTMTSVANATLLANLAPVFVTLASWALFRSPVSRIFM 119
Query: 149 IAALLIILSLLIMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ I+ ++++ G +A + A I +
Sbjct: 120 AGLVMAIVGVVVLKGGPGALGDGDLAGDGIAVVAAMFYAGYILAIGQLRSRFSTNRIMIW 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
A A+ + F+ + + ++ +Y + + +
Sbjct: 180 STASAAVCVLPMAIFAEATLLPSTGFGWAMLFGLAFVSHAGGQVAITYALAYLPPAFSSL 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P++ V + +L +P+ ++ IV+I +++
Sbjct: 240 TLLVQPVVAAVLAWILLSEPVGIMQATGGAIVLIGILI 277
>gi|222035660|emb|CAP78405.1| Uncharacterized inner membrane transporter yiJE [Escherichia coli
LF82]
Length = 312
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 203 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 300
>gi|291285363|ref|YP_003502181.1| hypothetical protein G2583_4755 [Escherichia coli O55:H7 str.
CB9615]
gi|331655642|ref|ZP_08356634.1| hypothetical transport protein YijE [Escherichia coli M718]
gi|13364348|dbj|BAB38295.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209752128|gb|ACI74371.1| hypothetical protein ECs4872 [Escherichia coli]
gi|209752130|gb|ACI74372.1| hypothetical protein ECs4872 [Escherichia coli]
gi|209752132|gb|ACI74373.1| hypothetical protein ECs4872 [Escherichia coli]
gi|209752134|gb|ACI74374.1| hypothetical protein ECs4872 [Escherichia coli]
gi|209752136|gb|ACI74375.1| hypothetical protein ECs4872 [Escherichia coli]
gi|290765236|gb|ADD59197.1| Hypothetical transport protein yijE [Escherichia coli O55:H7 str.
CB9615]
gi|331046743|gb|EGI18828.1| hypothetical transport protein YijE [Escherichia coli M718]
Length = 312
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V +VFL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAAVFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 203 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 300
>gi|89070588|ref|ZP_01157872.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
gi|89043805|gb|EAR50006.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
Length = 308
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 81/291 (27%), Gaps = 5/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
PT L + ++WG T + + L+ + V R +V
Sbjct: 2 TEAPTRANWLSILLLGLIWGGTFMVVRIALDGYGPITVACARTTLGAAATLALMVALRKP 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLT----RQGFLTSFSYFVTPVISVF 133
+ L + +A + + + F + +
Sbjct: 62 MPPASARLWGYIVAIGVTSTALPFFLLSWGQQFVPSAFAGLTIAAIPLFLLPMAHFFADD 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
S+ + A +LI L + +A T + T
Sbjct: 122 PLSLRKLGGVTLGFAGALVLIGPGLAQLGAGGEPLGQLACLAATVCYAASSTLTRRCPPI 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ F + L + A V G P + L + + + I+
Sbjct: 182 DPFALAALTLVVGAAVLVPAMLVFEGVPAVAPGAPTVAIIALGLLPTALAVVLRTLVIRS 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
A + ++ Y PL ++ +L + + G+++I + V P+
Sbjct: 242 AGPVFMTLVNYQVPLWSMLFGWLVLSEQLPGRFFAALGLILIGLGVSQWPS 292
>gi|229122226|ref|ZP_04251440.1| Uncharacterized transporter [Bacillus cereus 95/8201]
gi|228661075|gb|EEL16701.1| Uncharacterized transporter [Bacillus cereus 95/8201]
Length = 304
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ SVF+ E++ I
Sbjct: 72 ---IFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F ++ + + +
Sbjct: 129 GGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFVAWIWLGEVPTLVS 271
>gi|255079120|ref|XP_002503140.1| Drug/Metabolite transporter superfamily [Micromonas sp. RCC299]
gi|226518406|gb|ACO64398.1| Drug/Metabolite transporter superfamily [Micromonas sp. RCC299]
Length = 350
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/318 (11%), Positives = 93/318 (29%), Gaps = 39/318 (12%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+S+ +G + + + LWG + + + L S L V S R++ + +
Sbjct: 38 STSSILAALGGVALVSPFFLWGTSMVAMKEVLPATSPLFVASVRLVPAGAVLVAWAASKG 97
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ ++ +A + G L L S P+ L
Sbjct: 98 RPMPSGAMAWLAIAIFALVDGTAFQGCLAEG-----LQRTSAGLGSVIIDSQPLTVAVLA 152
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLH-----------------------------SG 166
++ E L + L ++ LL++ L
Sbjct: 153 AIIYGESLAPAGVFGLFLGVVGLLMLELPKEALAQIGGGDLGGALAAVTAGVDDGGGIWD 212
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF--- 223
+ +A A + +A+ + + ++ + +
Sbjct: 213 SGEWWMLLAAQSMAVGTVMVRWVCKYVDPVMATGWHMALGGVPLLAYSIATEPGVYENLD 272
Query: 224 -LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
L + L ++ + F Y + L+ + + + P+ + +L + +
Sbjct: 273 KLTAGDVGGLMYTSLLGSALAYGAFFYFASKGSLTKLSSLTFLTPMFAALFGYLLLGETL 332
Query: 283 DTVRTIVFGIVVIAMVVY 300
D V+ + ++ + +
Sbjct: 333 DEVQLAGAAVTIVGIYLV 350
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 42/131 (32%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
++ + V + V +PA +V S G G +
Sbjct: 52 VSPFFLWGTSMVAMKEVLPATSPLFVASVRLVPAGAVLVAWAASKGRPMPSGAMAWLAIA 111
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
I + + + G++R ++ + PL + V + I + + +
Sbjct: 112 IFALVDGTAFQGCLAEGLQRTSAGLGSVIIDSQPLTVAVLAAIIYGESLAPAGVFGLFLG 171
Query: 294 VIAMVVYLLPT 304
V+ +++ LP
Sbjct: 172 VVGLLMLELPK 182
>gi|209921428|ref|YP_002295512.1| hypothetical protein ECSE_4237 [Escherichia coli SE11]
gi|209914687|dbj|BAG79761.1| conserved hypothetical protein [Escherichia coli SE11]
gi|323380658|gb|ADX52926.1| protein of unknown function DUF6 transmembrane [Escherichia coli
KO11]
Length = 312
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYTRHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 203 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 300
>gi|188528021|ref|YP_001910708.1| hypothetical protein HPSH_06380 [Helicobacter pylori Shi470]
gi|188144261|gb|ACD48678.1| hypothetical protein HPSH_06380 [Helicobacter pylori Shi470]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 103/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLVGMFIDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|116628208|ref|YP_820827.1| DMT family permease [Streptococcus thermophilus LMD-9]
gi|116101485|gb|ABJ66631.1| permease of the drug/metabolite transporter (DMT) superfamily
[Streptococcus thermophilus LMD-9]
gi|312278826|gb|ADQ63483.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Streptococcus thermophilus ND03]
Length = 296
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 101/297 (34%), Gaps = 21/297 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G L IL+G++ ++T+ + Q S L +IS R + + V ++
Sbjct: 1 MKNKIILGCLAAAACEILFGLSFIFTKSITAQASGLALISWRFVTAFFFVNLYLLTRRQ- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + ++ + +++ + + PV+++ + S+
Sbjct: 60 ----KVVINGRNLKPLIRIAILNPIIYFICETIGIRMTTASESGAFLACIPVVALIMSSL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVG 191
LKE + Q++ ++ ++I +G + S +
Sbjct: 116 ILKEWPSRWQVVGVATTLIGIIIAVFAAGGSTNFSLVGYFILGLAVVSYALYCVDVEKAS 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGG---------EHFFLGNIPDTLFLIGYGLLNSF 242
F I +LA L + ++ + L +
Sbjct: 176 QFTSFEISYFMLASGCLTFGLFALSRSFLAGNLKELLTLPWSNPKFAITILYQGLGCSVI 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ I ++ + ++ I+++V L +P ++ + +VV+ + V
Sbjct: 236 GYILSNFAIATIGVNRTASFIGISTIISILAAVVFLGEPFSQLQILAGILVVLGVYV 292
Score = 39.1 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 35/103 (33%)
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A F+V + + + + L F + GI+ S G
Sbjct: 41 WRFVTAFFFVNLYLLTRRQKVVINGRNLKPLIRIAILNPIIYFICETIGIRMTTASESGA 100
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P++ ++ S ILK+ + + +I +++ +
Sbjct: 101 FLACIPVVALIMSSLILKEWPSRWQVVGVATTLIGIIIAVFAA 143
>gi|47568636|ref|ZP_00239334.1| hypothetical protein BCE_G9241_3007 [Bacillus cereus G9241]
gi|47554732|gb|EAL13085.1| membrane protein, putative [Bacillus cereus G9241]
Length = 303
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/299 (11%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ A++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 294
>gi|304390960|ref|ZP_07372912.1| probable permease [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304325843|gb|EFL93089.1| probable permease [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 364
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/347 (10%), Positives = 99/347 (28%), Gaps = 52/347 (14%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE--------------VISHRV 60
++ N + T +G + + + G+ PL++++ + + + + + R+
Sbjct: 5 TENNYVMNTKLGVITMLISATGMGLVPLFSRWATRTDMFDGTKGLNAGNSVGALMAAGRM 64
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ ++ K K ++ ++ + G ++ + L
Sbjct: 65 TMGIIFFVCIVLLTKKV-----QVWKELKVSPAIIMGGAMIGLSLGCYVTSTLLTTVANA 119
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL---------------------- 158
++ PV+ + L +F KE + +Q I + + +
Sbjct: 120 VLLIYIGPVVCIVLARIFRKEPMGVVQYICLVAVFTGMLFGNQLIGFGDKGFFVDFNLAA 179
Query: 159 -----------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
I SGI + + + I
Sbjct: 180 SSPEFPLAGLGNIFGFLSGIFYGASMFFNGYRKDADTAARGVWNFIAATVAAGSLALILH 239
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + + L ++ + + + + GI+ Y
Sbjct: 240 LVGTIGHVPGWALDLHLTPFNWVGTVLLWIICGPIALGFLLVAGRNLPAADYGIIAYWEV 299
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + I + + + F +VV + + + S KN+ +
Sbjct: 300 PVALFIGLLIFGEALTINTVLGFILVVGGGMYPSISMLRQSRKNRKQ 346
>gi|300726990|ref|ZP_07060410.1| putative membrane protein [Prevotella bryantii B14]
gi|299775713|gb|EFI72303.1| putative membrane protein [Prevotella bryantii B14]
Length = 289
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 87/287 (30%), Gaps = 3/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ G + A I +G PL T L ++ V+ +R ++ +
Sbjct: 2 NSTVKGFIAGILAAIFYGTNPLGTLPLYESGINSGSVLFYRYGFASILFALWMFMSKENF 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
++ + +G++ ++I ++ A + + ++ + +
Sbjct: 62 AIKRGYAIKLAVLGVMFAFSSIALYLSFLYMDAGVASTILFSYPIMTAVLMVLFYHERLS 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L+ ++ + ++ S + + ++ A S
Sbjct: 122 WATMLSITLAVSGIALLYRGGNGVTLSAAGMTLVLLSSLLYAIYIVSVNQLKISLSPLKF 181
Query: 199 EMCVLAIPALFYVVWNGFS-GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V+ L + + G + + L + IK +
Sbjct: 182 TFYVVLFGWLSVIAFMLLGGYPLQLLHGPLQWACGIQLGLLPTVLSLFFMTIAIKNIGST 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
IM P+ +V SV + + I +++ A+++ +L
Sbjct: 242 PSAIMGALEPVTAVVISVSLFHEAFTLRLAIGIVLILSAVILVILRK 288
>gi|228965607|ref|ZP_04126688.1| Uncharacterized transporter [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228794015|gb|EEM41537.1| Uncharacterized transporter [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 304
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ L S+FL E++ I
Sbjct: 72 ---IFMFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILASIFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + +++ G + + +A + F +T + + +
Sbjct: 129 GGVISFIGIALISFSQGDAIQLNSGGLFILLAAISESLYFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + L + +Y I A +
Sbjct: 189 LSSTVCMLIFLPGMYTEILAAPLEVNVSVLYLGLFPTVLPYIALAYIISHAGAAEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPVTACFIAWLWLGEVPTLVS 271
>gi|197118330|ref|YP_002138757.1| membrane protein [Geobacter bemidjiensis Bem]
gi|197087690|gb|ACH38961.1| membrane protein, putative [Geobacter bemidjiensis Bem]
Length = 298
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/302 (10%), Positives = 89/302 (29%), Gaps = 12/302 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+S+ P + L + + + + L + ++R++++ + ++
Sbjct: 1 MSETVTIKPWINPYLAILVGVFAVSFSAILVRVCS-APPLVIAAYRLIFTFTFLAPFTLW 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ V + S LA H+ + +L + P+ V
Sbjct: 60 GG----APALRGMTKRQVLLSAASGVFLAFHFVTWFISLKYTSIASSVVLVTTQPLFVVL 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+F KER+ + + L +++ G + ++A + +
Sbjct: 116 GSWIFFKERVPRMALYGGALAFAGSVVIGATDFQLGGSAFIGDMLALFAAVMVSGYLLIG 175
Query: 191 GSSEGFFIEMCVLAIPA----LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
G + + + +F+ + +
Sbjct: 176 RRLRGDVPLTGYTFVTYGSSAAVLTATALAARFPMYPHPAQDWLIFVALALVCTILGHTV 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F++ ++ + S V + PL I+ + L + + + I+ + ++ T
Sbjct: 236 FNWVLRYVQASVVSVSVLGEPLGAILWAAVFLGENPTPRQAVGGAIIFSGLYLFTRVTAR 295
Query: 307 NS 308
Sbjct: 296 GR 297
>gi|55821493|ref|YP_139935.1| hypothetical protein stu1517 [Streptococcus thermophilus LMG 18311]
gi|55737478|gb|AAV61120.1| Conserved hypothetical, predicted membrane protein (TMS10)
[Streptococcus thermophilus LMG 18311]
Length = 296
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 101/297 (34%), Gaps = 21/297 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G L IL+G++ ++T+ + Q S L +IS R + + V ++
Sbjct: 1 MKNKIILGCLAAAACEILFGLSFIFTKSITAQASGLALISWRFVTAFFFVNLYLLTKRQ- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + ++ + +++ + + PV+++ + S+
Sbjct: 60 ----KVVINGRNIKPLIRIAILNPIIYFICETIGIRMTTASESGAFLACIPVVALIMSSL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVG 191
LKE + Q++ ++ ++I +G + S +
Sbjct: 116 ILKEWPSRWQVVGVATTLIGIIIAVFAAGGSTNFSLVGYFILGLAVVSYALYCVDVEKAS 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGG---------EHFFLGNIPDTLFLIGYGLLNSF 242
F I +LA L + ++ + L +
Sbjct: 176 QFTSFEITYFMLASGCLTFGLFALSHSFLAGNLKELLTLPWSNPKFAITILYQGLGCSVI 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ I ++ + ++ I+++V L +P ++ + +VV+ + V
Sbjct: 236 GYILSNFAIATIGVNRTASFIGISTIISILAAVVFLGEPFSQLQILAGILVVLGVYV 292
Score = 39.1 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 35/103 (33%)
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A F+V + + + + L F + GI+ S G
Sbjct: 41 WRFVTAFFFVNLYLLTKRQKVVINGRNIKPLIRIAILNPIIYFICETIGIRMTTASESGA 100
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P++ ++ S ILK+ + + +I +++ +
Sbjct: 101 FLACIPVVALIMSSLILKEWPSRWQVVGVATTLIGIIIAVFAA 143
>gi|30262654|ref|NP_845031.1| EamA family protein [Bacillus anthracis str. Ames]
gi|47527964|ref|YP_019313.1| eama family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49185497|ref|YP_028749.1| EamA family protein [Bacillus anthracis str. Sterne]
gi|165869061|ref|ZP_02213721.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167632648|ref|ZP_02390975.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|167637854|ref|ZP_02396133.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|170704660|ref|ZP_02895126.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|177649765|ref|ZP_02932767.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190565562|ref|ZP_03018482.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227814513|ref|YP_002814522.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|229600560|ref|YP_002866968.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|254722649|ref|ZP_05184437.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
gi|254737694|ref|ZP_05195397.1| transporter, EamA family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254743129|ref|ZP_05200814.1| transporter, EamA family protein [Bacillus anthracis str. Kruger B]
gi|254752009|ref|ZP_05204046.1| transporter, EamA family protein [Bacillus anthracis str. Vollum]
gi|254760530|ref|ZP_05212554.1| transporter, EamA family protein [Bacillus anthracis str. Australia
94]
gi|30257286|gb|AAP26517.1| transporter, EamA family [Bacillus anthracis str. Ames]
gi|47503112|gb|AAT31788.1| transporter, EamA family [Bacillus anthracis str. 'Ames Ancestor']
gi|49179424|gb|AAT54800.1| transporter, EamA family [Bacillus anthracis str. Sterne]
gi|164715787|gb|EDR21304.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167514403|gb|EDR89770.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|167532946|gb|EDR95582.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|170130461|gb|EDS99322.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|172084839|gb|EDT69897.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190563589|gb|EDV17554.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227003528|gb|ACP13271.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|229264968|gb|ACQ46605.1| transporter, EamA family [Bacillus anthracis str. A0248]
Length = 304
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ SVF+ E++ I
Sbjct: 72 ---IFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F ++ + + +
Sbjct: 129 GGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFVAWIWLGEVPTLVS 271
>gi|29347658|ref|NP_811161.1| putative integral membrane protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339559|gb|AAO77355.1| putative integral membrane protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 284
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/271 (10%), Positives = 88/271 (32%), Gaps = 13/271 (4%)
Query: 46 FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHW 105
+ +SV V+ +R +++ + + +L K + + + +
Sbjct: 10 YAAGMSVDTVLFYRYAFAVIVLGVLMKLQGQSFTLRKADILPLVIM------GLLFSFSS 63
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
+ + S FV PV+ + F KE+++ + + + LL + + ++
Sbjct: 64 LLLFMSYNYMDAGIASTILFVYPVMVAVIMGAFFKEKISAITVFSILLALSGIALLYQGD 123
Query: 166 GI-------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
G + L +++++ Y + + + + Y+V F
Sbjct: 124 GNKPLSTVGIIFVLLSSLSYAIYIVGVNRSSLKTLPTTKLTFYAILFGLSVYIVRLNFCT 183
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ L L + + I+ + I+ P+ + V +
Sbjct: 184 ELQIIPSPLLWADVLALAILPTAVSLICTALAIQSIGSTPTAILGALEPVTALFFGVLLF 243
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + +++ A+ + ++ +
Sbjct: 244 HEKLTPRLMVGILMIITAVTLIIIGKSLIKK 274
>gi|107028527|ref|YP_625622.1| hypothetical protein Bcen_5782 [Burkholderia cenocepacia AU 1054]
gi|116686525|ref|YP_839772.1| hypothetical protein Bcen2424_6147 [Burkholderia cenocepacia
HI2424]
gi|105897691|gb|ABF80649.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia AU 1054]
gi|116652240|gb|ABK12879.1| protein of unknown function DUF6, transmembrane [Burkholderia
cenocepacia HI2424]
Length = 299
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 76/292 (26%), Gaps = 1/292 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
S + ++ V + W + + L+ ++ L++ + R + V + +
Sbjct: 7 STSRGARQPLVAAAAVAFTIVSWASAFPFIRIGLQGLAPLQLAAARFATAAVLVIAWLAW 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L D + + + L + A T +
Sbjct: 67 RRPPLPTKADAWRFLACGLLGIALYNALLNTGEQTVSAGAASFIVNTLPIFTALLAAVFL 126
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L L +A + +I L G + A SA F + +
Sbjct: 127 RERFNRWGWLGSLVSLAGIAVIAQGQPGGLVLGSGSTLILGAALCSASYFVLQRRLIPVY 186
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L A+ W + ++ + + +++ +
Sbjct: 187 GALPCTAYTLLAGAVLLAPWLPGALVSLGGGSRDTALAVVVLGVFPAALGYATWTFALGY 246
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y P + + SV + + + + ++V L
Sbjct: 247 FGAARAASFLYLTPAVATLLSVALTGERPGIATACGGLLAIAGVIVVALRGR 298
>gi|325269168|ref|ZP_08135788.1| hypothetical protein HMPREF9141_0997 [Prevotella multiformis DSM
16608]
gi|324988555|gb|EGC20518.1| hypothetical protein HMPREF9141_0997 [Prevotella multiformis DSM
16608]
Length = 307
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 102/286 (35%), Gaps = 5/286 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVL--EVISHRVLWSLPGVFFAIVYFSGGL 78
T+ G + + I +G PL++ + + +L V+ +R + + +++ L
Sbjct: 4 SSTLKGYGYASLSAITFGTIPLFSIPVMETGMLLPSVLIYRFAFGCLSMMAILLWRKQSL 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L + + F+ + + + +I F +
Sbjct: 64 HIRWGDGMRIMFLSILYAVSAVCLFSSYEFMPGGVATTLLFSYPVWTEVLLILFFHEKIT 123
Query: 139 LKERLNHLQIIAA--LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L+ L L IA L + +L+++ + ++ Y + +
Sbjct: 124 LRITLAILLAIAGVFFLGGIGQTDGIKSLWGVVLAMSSGLLYAIYMVIFPHMRIRKLPAL 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNI-PDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + L V++ F+ G + + ++ + + +
Sbjct: 184 KLNFYIFFMAMLLLVLYASFTTGGVQRIPDGASCLSLILLGLIPTTVSNVTLVRSLTLID 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++V I+ PL + + ++ +P+ T I F +++ ++++ +
Sbjct: 244 SASVAILGAFEPLTAMAIGITLMGEPLTTSIFIGFMLIITSVLILI 289
>gi|229144308|ref|ZP_04272714.1| Transporter, EamA [Bacillus cereus BDRD-ST24]
gi|228639095|gb|EEK95519.1| Transporter, EamA [Bacillus cereus BDRD-ST24]
Length = 303
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 90/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + S S
Sbjct: 4 KKEWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQIISSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQELKHSSL----AGLMVGFFLFVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFIVLGIAVATTGLYLLTAADSFQLNIGDILVLGCAVAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNQSFLFALFLTALFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++SV + + + I + + M+ LP+
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTSVLVANEQLSISAIIGCLCIFLGMIFVELPSKTKK 298
>gi|172036072|ref|YP_001802573.1| hypothetical protein cce_1157 [Cyanothece sp. ATCC 51142]
gi|171697526|gb|ACB50507.1| hypothetical protein cce_1157 [Cyanothece sp. ATCC 51142]
Length = 341
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 106/315 (33%), Gaps = 27/315 (8%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL----------PGVFFAI 71
+ G ++ +++ + T+ L ++ +I R S V
Sbjct: 11 NQISGRFYLLVGVMIFAVANSVTRKLTEIGAQNLIDGRNPISFCNVLFVGNLCALVALLG 70
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
VY+ ++ L + + +L+ + A+ F +L + P +
Sbjct: 71 VYYPQLKKIVLSNLSSRNWLYLLLVALLSGALAPALFFTSLERTPVNNVILVSRIEPPLI 130
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMT--------------LHSGIPLLSLAIAVT 177
+ L + L R+N + A++ L +++ G+ L
Sbjct: 131 LGLSVILLGARVNGWVVSGAIVSTLGVILTVILQPPQSEIVQMSGFQLGVGELMATGGAM 190
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL---GNIPDTLFLI 234
SA I + + F + A+ + + + G+ F+ + ++
Sbjct: 191 CSAIANIISKISLQNIPLGFFNVVKTALGTVIFFIIALLLYGKEHFMDVSSPLLWKWMIV 250
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
++ + G+KR S V + P+ ++++ IL + T + I ++V
Sbjct: 251 YGTVIVVVGQLCWFAGLKRTSASEVSLANSFNPITGVLAAFLILGEIPTTAQYIGGLVIV 310
Query: 295 IAMVVYLLPTVINSG 309
+ ++ + + +
Sbjct: 311 LGIIFNQIGIIQQNK 325
>gi|110756946|ref|XP_001120222.1| PREDICTED: transmembrane protein 20-like [Apis mellifera]
Length = 336
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/297 (8%), Positives = 82/297 (27%), Gaps = 9/297 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G F + + I+ + ++ V + +++ R + + + S L
Sbjct: 32 QESTKWFGIFLAFLSGTFFTISSALVKAVQNVHPMVLLTIRSVLQMIVMAVVAFKVSKNL 91
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K G++ + L + + +S +
Sbjct: 92 FGPKGQRMLLHLQGIIGGATLSLLYYSFRKLPIGDATTIIFSSPVIVIALSFIFLKEPCG 151
Query: 139 LKERLNHLQIIAALLIILSLLIMT---------LHSGIPLLSLAIAVTWSAYCFARKTIP 189
+ + + A ++ + + + + + + + + +
Sbjct: 152 ILRVIVMCALFAGVIFVSKPPFLFQIHRAESYNVMGYVCAILATLFTALNIVIMRKCSEI 211
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
S+ F + L F+ + + + F + ++ L + +
Sbjct: 212 HYSAIIFNLSWWSLVTAVFFFFLVSDNQEQKSKFSYDWITWSKILLIALTGLSGQILVTN 271
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+K V + +L + ++ + I +++I+++ I
Sbjct: 272 ALKIEGAGKVSVTRSLDIILAYIVQIYFFGDQPTSTSIIGAFLIIISVICMGFEKEI 328
>gi|331266165|ref|YP_004325795.1| hypothetical protein SOR_0792 [Streptococcus oralis Uo5]
gi|326682837|emb|CBZ00454.1| hypothetical protein SOR_0792 [Streptococcus oralis Uo5]
Length = 300
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 100/296 (33%), Gaps = 23/296 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L + G + L+T+ L S L ++HR + +
Sbjct: 2 NEKTKAYLAALSFSAIIGFSFLFTKIALGYASPLTNLAHRYTIAALVLAIL-----HQTK 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ +L + +L S + + F +AL + P+ ++FL SVFL
Sbjct: 57 LINVSLSRKDILSILPMSLFYPILFFIFQSFALQYISSSEAGILQALVPIFTLFLASVFL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+ + LQ +L + ++ + L G + ++ + + + +
Sbjct: 117 KEKTSLLQKFFLILSVAGVVFIFLSKGANFSTETASLGFLLMLGSVLANAINNILSKAKG 176
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGN-----------------IPDTLFLIGYGLLNSF 242
A+ V++ GF L + L L +
Sbjct: 177 GRYRAMDMTVVVIFVGFVTFNTLSLTSHYLEGNILSYFGPLGQVPYLLSILYLGILASIV 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ Y I R STV + +L I++ IL +PI + I +++ ++
Sbjct: 237 TGSLSIYAIVRLGASTVSVFGNLGTVLTILAGALILHEPIYSYHVIGAALIITGIL 292
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 35/131 (26%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
++ + T + A + + + L L
Sbjct: 12 LSFSAIIGFSFLFTKIALGYASPLTNLAHRYTIAALVLAILHQTKLINVSLSRKDILSIL 71
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F S+ ++ S GI++ P+ + + LK+ ++ +
Sbjct: 72 PMSLFYPILFFIFQSFALQYISSSEAGILQALVPIFTLFLASVFLKEKTSLLQKFFLILS 131
Query: 294 VIAMVVYLLPT 304
V +V L
Sbjct: 132 VAGVVFIFLSK 142
>gi|323698990|ref|ZP_08110902.1| protein of unknown function DUF6 transmembrane [Desulfovibrio sp.
ND132]
gi|323458922|gb|EGB14787.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
desulfuricans ND132]
Length = 304
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 78/283 (27%), Gaps = 10/283 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L + + + T + + + SVL V + R+L + + G L
Sbjct: 10 GPLLILSGALCFSTTGFASALVVADGASVLAVGAVRMLIGGAALAAWC-AWRGILPKRGS 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L +A L G + +P+ L + ER
Sbjct: 69 WSARDLLPPTLALAAYQLLFFKGTNTAGVALGTVMSIGI----SPIAVAVLNWIVNAERP 124
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS---EGFFIEM 200
A ++ + L+++ G P ++ + A + +
Sbjct: 125 ARAWYPATIVALFGLVLLNWTDGSPDRLRSLLPSIGAGFAYAVYVVFSKPLLRYAPETGI 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + F + + L + + F + G++ T
Sbjct: 185 MEVCLLCGLCLSPFLFLSPMRWLASGTGIAVALDLGLVTAALAFTLMLGGLRTTPAPTAA 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ PL + L + + + ++ ++ +
Sbjct: 245 TLGLAEPLCAALLGFLCLNEAVTPHAVVGIACLMGGALILSVW 287
>gi|296535975|ref|ZP_06898122.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296263698|gb|EFH10176.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 305
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 78/299 (26%), Gaps = 18/299 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ PT + L CA +L+ + ++L V + + R L + + I
Sbjct: 4 PAAPTWLPILLFLCAPLLFASNMIGARWLSGSVPPVTLAFGRWLVAALLLLPII-----W 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + LK A + + + A + +TP+I + +
Sbjct: 59 PHLRQGALKRAPAGLLALLVLLGGVISVAPQYGAARYTSAGNIALIAALTPLIVAVIERL 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFAR 185
L + +L+ G L+ AI R
Sbjct: 119 VWGIALRPAMLAGIACAFTGILVAAFRGDVGALLRLEFNPGDALMLCAILAWAGYTALLR 178
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ L + + LG + + +
Sbjct: 179 HRPVALPPLLLLWVVAAGGALCLAPGMALEWGHLGVPQLGARALWGMIFLGLVAGIGAYG 238
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
F+ + + + Y P + +L + + + +V+ + + L
Sbjct: 239 AFARIVASFGAARASMAMYLVPAYALGLGATLLGESLHPYHAVAMALVLGGVAIGTLRA 297
>gi|56695024|ref|YP_165370.1| hypothetical protein SPO0096 [Ruegeria pomeroyi DSS-3]
gi|56676761|gb|AAV93427.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 304
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/281 (11%), Positives = 78/281 (27%), Gaps = 6/281 (2%)
Query: 37 WGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
+ + L ++L E+ ++R + + A+ G + +G++
Sbjct: 23 FDMMGLIIKYLSPRYGAAELSAYRNFFGVFPSVIALWSSPGWHRAGRPWRIRQWRLGLMR 82
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ F Y+L S + V L L ER+ ++ A LL
Sbjct: 83 --GVYVTFAQFLFYYSLGKLAFATASTITYANAVFMTALAVPLLGERVGLMRWAAVLLGF 140
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
+L++ A+A +A+ +A + + + + +V
Sbjct: 141 AGVLLVMKPGSDSFTPDALAPLGAAFLYALTGVSARQMDSAVPSALINLYSVVAALVGAL 200
Query: 216 FSGGEHFFLGNIPDTL---FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ ++ G + + S + Y + V
Sbjct: 201 ALALLSGGFTPLAQWSDLGWIAAMGGFGGTAVLCLVASYRMTEQSNLAPFSYFGIPIAFV 260
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + + + ++ + I S +
Sbjct: 261 AGWLVFDETPWADLFPGAFFIAGGGLMIVWRERIRSRAGRR 301
>gi|306829701|ref|ZP_07462890.1| DMT superfamily drug/metabolite transporter [Streptococcus mitis
ATCC 6249]
gi|304428052|gb|EFM31143.1| DMT superfamily drug/metabolite transporter [Streptococcus mitis
ATCC 6249]
Length = 300
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 50/304 (16%), Positives = 98/304 (32%), Gaps = 23/304 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L + G + L+T+ L S L ++HR + +
Sbjct: 2 NEKTKAYLAALSFSAIIGFSFLFTKIALGYASPLTNLAHRYTIAALVLVVL-----HQTK 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+K +L + +L S + + F +AL + P+ ++ L SVFL
Sbjct: 57 LIKVSLSRKDILSILPMSLFYPLLFFIFQSFALQYISSSEAGILQALVPIFTLLLASVFL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-----------------C 182
KE+ + LQ LL + ++ + L G + ++ +
Sbjct: 117 KEKTSLLQKFFLLLSVAGVVFIFLSKGANFSTETASLGFLLMLGSVFSNAINNILSKYKG 176
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
K + + + + Y+ + G L L +
Sbjct: 177 GQYKVMDLTVVVILVGFIVFNCLSLFSYIASSNLMGYFEPLGHVGYIFSILYLGILASIV 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ Y I R STV + +L I++ IL +PI + I +++ ++ L
Sbjct: 237 TGSLSIYAIVRLGASTVSVFGNLGTVLTILAGALILHEPIYSYHVIGATLIIAGILGMNL 296
Query: 303 PTVI 306
Sbjct: 297 RKKK 300
>gi|294667281|ref|ZP_06732501.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602953|gb|EFF46384.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 298
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 99/296 (33%), Gaps = 9/296 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + ++ A + + + L L+V R SLP V + +G
Sbjct: 2 PTTRSPLPAIAWMVAAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+++ P G+ + + V G F++ + YFV P++ L
Sbjct: 62 PRAIV------PVRWGLHLLRGVLGMVMIGCFVFGIKRMPLSTAYTLYFVAPLLVAALSV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L E + + A + ++ ++++ + + V +A +A + V
Sbjct: 116 PLLGEHVGPRRWTAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAATAYAVAAVTVSLLTR 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ LF + G + + G GL + + R +
Sbjct: 176 TDTPQAMVVWFLLFMAIGAGLLAIPGWVPLQAGHAGLIAGMGLAGALGQVALTQAFMRGE 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
S + +EYT + +I + + D+ GI+V + + + + +
Sbjct: 236 ASMIAPLEYTGLVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRRERIRQADR 291
>gi|217077964|ref|YP_002335682.1| permeases of the drug/metabolite transporter [Thermosipho africanus
TCF52B]
gi|217037819|gb|ACJ76341.1| permeases of the drug/metabolite transporter [Thermosipho africanus
TCF52B]
Length = 278
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 78/277 (28%), Gaps = 1/277 (0%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+++G++ L+T+ L+ + +S R L++ + K K
Sbjct: 2 SVIFGLSFLFTKNALDFTTPYNFLSIRFLFASLSFLILFALKIIKIKNTKKLYKLLIVAF 61
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
I + F + T + + V L + +
Sbjct: 62 FQPILYFIFETNGLKFASSSEAGILIATIPIFITFLSPFILKEKVPKINYLFVFLSFSGV 121
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
L+I+ L + G L+ A+ ++ S + M + +
Sbjct: 122 LLIMGLNVNEGFKGKILILFAVFSAVFYNFASKYFSKEFSPQEVTFVMMITGWIFFTILA 181
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ + ++ F + +Y + + I ++ ++
Sbjct: 182 LINRELNYNVISNKNVFISAIYLGIFSSTIAFFLINYMLSKVSPVQSSIFSNLTTVVSVI 241
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ FI + I I ++++ + +
Sbjct: 242 AGFFIRHERITFNHIIGMSLIILGVWGVNYFKYRSEK 278
>gi|126666896|ref|ZP_01737872.1| hypothetical protein MELB17_06644 [Marinobacter sp. ELB17]
gi|126628612|gb|EAZ99233.1| hypothetical protein MELB17_06644 [Marinobacter sp. ELB17]
Length = 306
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 94/287 (32%), Gaps = 10/287 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+F +LW + L +S L+++ + S+ + +V
Sbjct: 2 TNQKQAMMFGLATVLLWSTVATAFKLALADLSPLQLLLIACVASILVMGTILVLQGRWRL 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ + + +++ A + ++ +L FL
Sbjct: 62 VFQL--RSGQYAQSFMMGLINPCLYYFLLFGAFDRLPAQEAQPINYTWALVLAYLSVPFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
+RL I A L+ + ++ + LS + AV + + I +
Sbjct: 120 GQRLRGRDIAAGLVCYAGVFVIATRGAVTDLSFSDPVGVAFAVGSTLVWASYWIIATRDT 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L +V + F F ++SY +K+
Sbjct: 180 RDPVVGLFLNFLFGLPVIVAAAVATDSLHFSLTGSLLAAGYVGVFEMGIAFVLWSYAMKK 239
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
A + V + + +P L +V FIL + I + +++ + +
Sbjct: 240 AENTAKVSNLIFISPFLSLVFIWFILGERILPSTYVGLVLIMAGLWL 286
>gi|148654138|ref|YP_001281231.1| hypothetical protein PsycPRwf_2341 [Psychrobacter sp. PRwf-1]
gi|148573222|gb|ABQ95281.1| protein of unknown function DUF6, transmembrane [Psychrobacter sp.
PRwf-1]
Length = 312
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/280 (7%), Positives = 72/280 (25%), Gaps = 14/280 (5%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+W ++ ++ + + + + S R+ + + ++ + K +G
Sbjct: 19 AFMWSLSFIFYRIGVPEFGSVAFASIRLELAGITMLLFVLLNPKNRQGILANWKLLTIIG 78
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL--------- 143
+ + + + S + S+F ++++
Sbjct: 79 LCSTAIPFVLFGYAAKSVNAGVLAVLNASVPMMSGVMASLFFNDKLSRKQILGLVIGVIG 138
Query: 144 ----NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+A + P+ A A + I
Sbjct: 139 VFILMSENFLAMMHSSGGDHSSLQSQLWPMGFALFACIGYATGANLTRNYLEHISPIAIT 198
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L ++ + ++ H + + L + + IK
Sbjct: 199 AGTLITASIVMLPVAIYNFPYHHSISAKAWGSVICIGILSTAIALIFMNQLIKSIGPVRA 258
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ I+ +L + +D + +++ +
Sbjct: 259 TSITLVIPIFAIIFGYILLGESLDIFAIVGSVVILFGTYL 298
>gi|30263014|ref|NP_845391.1| EamA family protein [Bacillus anthracis str. Ames]
gi|47528353|ref|YP_019702.1| eama family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49185854|ref|YP_029105.1| EamA family protein [Bacillus anthracis str. Sterne]
gi|165869211|ref|ZP_02213871.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167632186|ref|ZP_02390513.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|167637234|ref|ZP_02395514.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|170685066|ref|ZP_02876291.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|170705045|ref|ZP_02895510.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|177649872|ref|ZP_02932873.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190564770|ref|ZP_03017691.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227814139|ref|YP_002814148.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|229604833|ref|YP_002867287.1| transporter, EamA family [Bacillus anthracis str. A0248]
gi|254685605|ref|ZP_05149464.1| transporter, EamA family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254723013|ref|ZP_05184801.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
gi|254738068|ref|ZP_05195771.1| transporter, EamA family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254742759|ref|ZP_05200444.1| transporter, EamA family protein [Bacillus anthracis str. Kruger B]
gi|254752385|ref|ZP_05204421.1| transporter, EamA family protein [Bacillus anthracis str. Vollum]
gi|254760901|ref|ZP_05212925.1| transporter, EamA family protein [Bacillus anthracis str. Australia
94]
gi|30257647|gb|AAP26877.1| transporter, EamA family [Bacillus anthracis str. Ames]
gi|47503501|gb|AAT32177.1| transporter, EamA family [Bacillus anthracis str. 'Ames Ancestor']
gi|49179781|gb|AAT55157.1| transporter, EamA family [Bacillus anthracis str. Sterne]
gi|164715937|gb|EDR21454.1| transporter, EamA family [Bacillus anthracis str. A0488]
gi|167514741|gb|EDR90107.1| transporter, EamA family [Bacillus anthracis str. A0193]
gi|167532484|gb|EDR95120.1| transporter, EamA family [Bacillus anthracis str. A0442]
gi|170129900|gb|EDS98762.1| transporter, EamA family [Bacillus anthracis str. A0389]
gi|170671326|gb|EDT22064.1| transporter, EamA family [Bacillus anthracis str. A0465]
gi|172083824|gb|EDT68883.1| transporter, EamA family [Bacillus anthracis str. A0174]
gi|190564087|gb|EDV18051.1| transporter, EamA family [Bacillus anthracis Tsiankovskii-I]
gi|227003153|gb|ACP12896.1| transporter, EamA family [Bacillus anthracis str. CDC 684]
gi|229269241|gb|ACQ50878.1| transporter, EamA family [Bacillus anthracis str. A0248]
Length = 303
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTLSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 294
>gi|51244050|ref|YP_063934.1| hypothetical protein DP0198 [Desulfotalea psychrophila LSv54]
gi|50875087|emb|CAG34927.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54]
Length = 321
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 85/295 (28%), Gaps = 17/295 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G LF A +W + + L + +S + + +R +L +
Sbjct: 22 KERRREMLWGYLFAIGATAIWSGNFIIARGLSETLSPISLAYYRWAVALLVLLPI----G 77
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + + + S + + A T S P+ V
Sbjct: 78 IRPLLREWQELKLHLPYLCLTSLVGVTIFNTMIYVAGHTTTAINLSLISITAPIFIVIFS 137
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCF 183
+ E++ + + LL+ + ++++ G + A
Sbjct: 138 RLLFAEKITLHKSLGILLVAVGVVLLITGGELARLLRISFAIGDLWMLAAAMFFGLYSIL 197
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ S F + L + L + L +
Sbjct: 198 LKYKPRKLSIWAFQLSTFALGLFFLTPFFIWDYCTSPPVSFSASTLGAILYLGVFASLTA 257
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
F +++ I G++ Y+ P+ ++ IL + I +V ++V +
Sbjct: 258 FALWNKAILVIGPVRAGMIYYSLPIFSGTAAYLILGEAITSVHLCSVLLIVSGIF 312
>gi|327398347|ref|YP_004339216.1| hypothetical protein Hipma_0178 [Hippea maritima DSM 10411]
gi|327180976|gb|AEA33157.1| protein of unknown function DUF6 transmembrane [Hippea maritima DSM
10411]
Length = 289
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 92/292 (31%), Gaps = 14/292 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ +G L A + G ++ + + + + + R I L L
Sbjct: 1 MDKKIGYLSAVLAALFMGSLGVFVKAV-DIDAFVLTAFR---------LGIPVVVLFLLL 50
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++ + S L++ F+I ++ + L+ ++ P I+ G FLK
Sbjct: 51 ILKRVRFGLPSKATIASGVFLSLTIIFYIQSIKSTSMSLSVLLLYLGPQIAAVGGVFFLK 110
Query: 141 ERLNHLQIIAALLIILSLL----IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
E+L+ ++ L + L+ + + S + +
Sbjct: 111 EKLSGFDLLCLGLAMAGLITTLEFRFSLDRLSSFVYGLLSGLSYGLLIVSNRAIKQRDDL 170
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I ++ F L + L + F + I K
Sbjct: 171 LSISFSQFIAGFLTILPFLVILKPSFSLSMGDLAVVLAMSLVCGLFAIMLMINAIGHLKA 230
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ GI+ Y ++ K+ ++ + + ++V + ++ L + +
Sbjct: 231 AEYGILSYLEIFFAVMFGFLFFKEDLNLYKIVGGLMIVASGILQTLKSQLTK 282
>gi|320158024|ref|YP_004190402.1| permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus MO6-24/O]
gi|319933336|gb|ADV88199.1| permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus MO6-24/O]
Length = 301
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 106/285 (37%), Gaps = 20/285 (7%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG + T+ L SVL IS R + + ++
Sbjct: 21 LLLLVAVFWGTSYGLTKSALVYTSVLLFISIRFSITFLCMLPVVI--------RDFRQGL 72
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
K + + + IL+ + ++ + +F +T +++ F V K+R+++
Sbjct: 73 NKDWKIAIPTGFILSAIFFCEVFGVSQTSASNAAFLISLTVILTAFAELVINKKRISNTL 132
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI-----------AVTWSAYCFARKTIPVGSSEGF 196
+ + ++ +L++T GI L A+ + + + +S
Sbjct: 133 LALTVCSVIGVLLLTSDQGIELSLNTGDYFILTAALLRALMVTMTKRFTEGKAITTSTLT 192
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
++ V+A A+ V+ + + F F + +Y ++R
Sbjct: 193 SLQSFVVASCAIVGVLVYVPAAEIVLPVSLEFWLTVAYLVLFCTLFAFYVQNYAVRRTSP 252
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V ++ + PL + ++ L++ + ++ + +++ +++V
Sbjct: 253 TRVSLLMGSEPLFGAIFAMVWLQESLTALQLLGGALILFSVIVTS 297
>gi|260550254|ref|ZP_05824467.1| DMT family permease [Acinetobacter sp. RUH2624]
gi|260406782|gb|EEX00262.1| DMT family permease [Acinetobacter sp. RUH2624]
Length = 295
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 84/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++GTLF CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLL----KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + + I ++ + I + + ++F
Sbjct: 62 KIAYISSTPSKLSVFTQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + +I LL ++ + I++ L+ + ++ + Y I
Sbjct: 122 GRFILKESIYIHSLIGTLLAVVGISIISWKVENSLLMLINASIAGTGYGLFSVLIKKFRL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLINLHSINFSTDIILGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLM 288
>gi|225865017|ref|YP_002750395.1| transporter, EamA family [Bacillus cereus 03BB102]
gi|225787640|gb|ACO27857.1| transporter, EamA family [Bacillus cereus 03BB102]
Length = 303
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 87/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGAIYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTPSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 294
>gi|58580335|ref|YP_199351.1| hypothetical protein XOO0712 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58424929|gb|AAW73966.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 298
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/296 (15%), Positives = 101/296 (34%), Gaps = 9/296 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + ++ A + + + L L+V R SLP V + +G
Sbjct: 2 PTTRSPLPAIAWMVVAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+++ P G+ + + V G F+Y L YFV P++ L
Sbjct: 62 PRAIV------PVRWGLHLLRGALGMVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L E + + A + ++ ++++ + + V +A +A I V
Sbjct: 116 PLLGEHVGPRRWAAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAATAYAVAAITVSLLTR 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ LF + G + + + G GL + + R +
Sbjct: 176 TDTPQAMVVWFLLFMAIGAGLLAIPGWVPLHAGHAGLIAGMGLAGALGQVALTQAFMRGE 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
S + +EYTA + +I + + D+ GI+V + + + + +
Sbjct: 236 ASMIAPLEYTALVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRREPIRRADR 291
>gi|329964420|ref|ZP_08301501.1| putative membrane protein [Bacteroides fluxus YIT 12057]
gi|328525469|gb|EGF52517.1| putative membrane protein [Bacteroides fluxus YIT 12057]
Length = 318
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/304 (11%), Positives = 89/304 (29%), Gaps = 26/304 (8%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +F A +WG+ ++F+ V+ L V R+ ++ + +
Sbjct: 6 WKGHAAMFGANAMWGLMSPISKFIMLGGTVTPLVVTDLRIGGAMILFWITSFFQK----- 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + + V + + + G FI+ + S P+ ++ L ++ LK
Sbjct: 61 -PEHVSHKDLASLFVAALLGIVFNQGCFIFGVSLSSPGDASIITTSMPLWAMVLAALILK 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF----------------- 183
E + +++ L++ L +G + +
Sbjct: 120 EPITGKKVLGIAAGASGALLLILGNGQNGQETSATTGGTMIWGDLLVLLAQFCYALYIVL 179
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + S M A + + + L
Sbjct: 180 YKDFVNKYSLVTIMKWMFTYAFICILPFSADSLMHTDWSGLHLPELGGLSFIVVGATFLS 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + G K + + G+ Y PL+ + +V + ++ + + + +
Sbjct: 240 YMLIVVGQKNLRPTVAGMYNYIQPLVACIVAVCWGMDSFNFIKGMAVIFIFGGVYLVTSS 299
Query: 304 TVIN 307
Sbjct: 300 RSRK 303
>gi|207092678|ref|ZP_03240465.1| hypothetical protein HpylHP_07431 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 298
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 103/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISDPSVENVGPVEILMGVLSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|206579844|ref|YP_002237937.1| UAA transporter family protein [Klebsiella pneumoniae 342]
gi|288934846|ref|YP_003438905.1| hypothetical protein Kvar_1973 [Klebsiella variicola At-22]
gi|206568902|gb|ACI10678.1| UAA transporter family protein [Klebsiella pneumoniae 342]
gi|288889555|gb|ADC57873.1| protein of unknown function DUF6 transmembrane [Klebsiella
variicola At-22]
Length = 298
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 87/278 (31%), Gaps = 3/278 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A I+ G + L + V++V+ R L + IV S
Sbjct: 1 MQLTRGVWQMSLAMIISGSIGAFV-LLSGLPVMDVVFWRCLIGALTLLVFIVLSGQPFSR 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +G L + + ++ + + + + V V
Sbjct: 60 LTRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGERVSAV 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L ++I+LS + + H + +A+ + + I
Sbjct: 120 KWGWLLLAFGGVVILLSSELTSAHGEGLTTGVLLALGAAFFYALTAIIARKLHP--LPAQ 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ I L VV + + P LI + ++ + I++ G
Sbjct: 178 HIAFIQVLVGVVMLLPLVHAPEWTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPITG 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + PL+ +V + + V+ I +++ A
Sbjct: 238 SLSFIYPLVAMVVDYLVFHHALTPVQLIGGMLILFAAA 275
>gi|148239408|ref|YP_001224795.1| DMT family permease [Synechococcus sp. WH 7803]
gi|147847947|emb|CAK23498.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Synechococcus sp. WH 7803]
Length = 307
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 91/289 (31%), Gaps = 15/289 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
S ++ A + + + + + L + V E++ R L S+ +
Sbjct: 16 TQSPQEWRACTYLLGAALAFSLMTVCVKHLGGRLPVAEIVLIRSLISIAITLTML----- 70
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ G+L+ + + F AL + + + P ++
Sbjct: 71 ---AQVNISPWGHQKGLLLVRGALGTIALLLFFQALASLPLAAATLIQYTYPTLTALSAW 127
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPV 190
LKE + +A +L ++ ++++ + A+ A A + V
Sbjct: 128 ALLKEPIRKRIGLAIVLGLIGVVLVVQPEWMGQSVAGLPAMAALIGLGGALMTALAYVSV 187
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ ++ L V L + D ++LIG GLL + G
Sbjct: 188 RQLSAREHPLVIVFYFPLVSVPATLPLLVNQLVLPSAMDWVWLIGVGLLTQVGQVWLTQG 247
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + Y + + V +P+ + V+ A ++
Sbjct: 248 LAALPAARATSINYVQVVFATLWGVLFFAEPVTGTVIVGALCVLGATLI 296
>gi|16077323|ref|NP_388136.1| efflux transporter [Bacillus subtilis subsp. subtilis str. 168]
gi|221308069|ref|ZP_03589916.1| hypothetical protein Bsubs1_01403 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312392|ref|ZP_03594197.1| hypothetical protein BsubsN3_01406 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317325|ref|ZP_03598619.1| hypothetical protein BsubsJ_01408 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321589|ref|ZP_03602883.1| hypothetical protein BsubsS_01429 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|1175623|sp|P42243|YCBK_BACSU RecName: Full=Uncharacterized transporter ycbK
gi|710005|dbj|BAA06475.1| ycbK [Bacillus subtilis]
gi|2632540|emb|CAB12048.1| putative efflux transporter [Bacillus subtilis subsp. subtilis str.
168]
Length = 312
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/310 (10%), Positives = 80/310 (25%), Gaps = 18/310 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYF 74
++ GT+F+ + + ++ ++ Q+ V+ +R L ++P + + +
Sbjct: 6 QSKIREAAAGTIFLLIGTVCFASKSIWIKWAYQMGAEPDAVLLYRQLLAVPLFWLIFLIY 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ K K + L + P+
Sbjct: 66 RPPMPDGK---KKGDLWKACGAGVFCFFLSPLLDFIGLNHVSAMVERILLMSYPLFVFGF 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ + + A L ++ L + L + +
Sbjct: 123 TACRDRKMSSIQDLFAVLAVMFGLFLALGGWNAELFQANMIGAVFILLSSAVYAGYLVLS 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGG-------------EHFFLGNIPDTLFLIGYGLLNS 241
G + + + G + LF + +
Sbjct: 183 GHLVHQIGGIRLNAYGMTAAGAAMMLYTGIKSAAGMNTPMAAYPLSMYGLFAVIAVVTTV 242
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F + GIKR + P+L I L + + ++ I G V +
Sbjct: 243 IPFVLMLEGIKRIGAQRAAAISMAGPILTIFYGALFLGERLGLIQVIGCGGVFFVITGME 302
Query: 302 LPTVINSGKN 311
+ K
Sbjct: 303 YRKLKTGKKE 312
>gi|298245211|ref|ZP_06969017.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
gi|297552692|gb|EFH86557.1| protein of unknown function DUF6 transmembrane [Ktedonobacter
racemifer DSM 44963]
Length = 311
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 90/297 (30%), Gaps = 19/297 (6%)
Query: 4 GATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWS 63
A+ + + + G LFV A I +G P++ ++ S LE+ R+ +
Sbjct: 6 SASPEASGTSTAPGTSPELARRGLLFVCIAVIFFGSNPVFVRWAAPFSSLEIAFWRLAIA 65
Query: 64 LPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFS 123
V + L + + ++N + A+H+ F+I +L +
Sbjct: 66 TLLVALMGLITHQPLRIARGEIRNFAFY------GLVTALHFVFYISSLSFTTIAHSLAL 119
Query: 124 YFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----------- 172
+ +P+ +FLKE L + + + +L + I+
Sbjct: 120 TYTSPIFVTLFSVIFLKEPLPKRKYVGIGVAVLGVGILAGFEPNYTTCNLNGGRCMILGD 179
Query: 173 --AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
AI ++ V + F + A +++ G +
Sbjct: 180 GLAILSALCFGIYSIAGRSVRDAHPLFRYTTNVYGFAALWLLPIGTYLAFQHSYSPLAIA 239
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ +++ I+ + ++ + I+ + +
Sbjct: 240 SVVALGVFPLGLGHTLYNAAIRYVHATYANLIATQEVTIGIILGIIFFHEIPSWSAV 296
>gi|228933959|ref|ZP_04096802.1| Uncharacterized transporter [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228825655|gb|EEM71445.1| Uncharacterized transporter [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 304
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGSAFPAIRMGLESYTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ SVF+ E++ I
Sbjct: 72 ---IFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F ++ + + +
Sbjct: 129 GGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGAFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFVAWIWLGEVPTLVS 271
>gi|229011673|ref|ZP_04168856.1| Transporter, Drug/metabolite exporter [Bacillus mycoides DSM 2048]
gi|228749631|gb|EEL99473.1| Transporter, Drug/metabolite exporter [Bacillus mycoides DSM 2048]
Length = 296
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 95/289 (32%), Gaps = 10/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ +F + ++ + + +R+L++ + +++ + S
Sbjct: 2 KSPILSYFILFFGVFALSTSAIFVK-IADAPAAITAFYRLLFATVILLPFLIFNTNNRSE 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ K G+L S LA H+ + +L ++ + P+ S+ G K
Sbjct: 61 LRSLSKKQWGFGLL--SGLFLAAHYVLWFESLQYTSIASSTVIVTLQPLFSMVGGYFLFK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
ER II L+ I +++ + IA F
Sbjct: 119 ERFTKGAIIGCLIAISGSIVIGWQDFQISGEALYGDILAFIAAGVITAYFFISQYVRKDL 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ +LF ++ F F+ + IF++ +K
Sbjct: 179 SLIPYSVISYGSSSLFLGIFAFTQQSSFFNYTAQTWWSFIGLAFIATILGQTIFNWLLKW 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + + + + FIL + I + + ++ I + ++LL
Sbjct: 239 MSATVISMSILGETIGTCILAYFILDETISLQQGLGILLIFIGLALFLL 287
>gi|254454239|ref|ZP_05067676.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198268645|gb|EDY92915.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 288
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 88/291 (30%), Gaps = 5/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +G + + ++ + ++ L +V+ +++ R + V G
Sbjct: 2 TTQNIRLGIMLMIATTFVFAMQDGISRHLAGQYNVMMIVTIRYWFFAAFVIALARRQVGS 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ T + +F +LA ++ + + P++ L
Sbjct: 62 VRKAAATT----QPVLQIFRGLLLASEICVMVFGFVLLGLVEAHAIFTCYPLLIAALSGP 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ + A + + +LI+ A +A+ FA + +
Sbjct: 118 ILGEQVGWRRWAAIGIGFIGVLIILKPGFTVFSPAAAIPLLAAFMFALYGLLTRYAARRD 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ V G + PD L++ + + + A+ S
Sbjct: 178 STATSFFWTGVVGAVALTPLGLWMWEPMAGPDWLWMAALCITGVTGHWLLIKTYEVAEAS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
V Y + + + + + I G+VV A + L +
Sbjct: 238 AVQPFAYLQLVFASSIGLTVFNETLSPNVAIGAGLVVSAGMFTLWRARRAA 288
>gi|218898117|ref|YP_002446528.1| transporter, EamA family [Bacillus cereus G9842]
gi|218542406|gb|ACK94800.1| transporter, EamA family [Bacillus cereus G9842]
Length = 303
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 90/299 (30%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++V A++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVVVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNVIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTPSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 294
>gi|167747957|ref|ZP_02420084.1| hypothetical protein ANACAC_02689 [Anaerostipes caccae DSM 14662]
gi|167652607|gb|EDR96736.1| hypothetical protein ANACAC_02689 [Anaerostipes caccae DSM 14662]
Length = 326
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 81/297 (27%), Gaps = 14/297 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
N T +G +F + ++WG + + + V ++ R L +
Sbjct: 19 NQKNKTKLGKAALFGSALIWGSSFFIMKNTIANVPENFLLGTRFLAGALLLCIFF----- 73
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + F L +F + V F+
Sbjct: 74 ---HKRLGKIDKSYFKTGFVLGGFWFWAYWFQTEGLYHTTPGKNAFLTAIYCVAVPFVTW 130
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKTIPVG 191
++ K++ +AAL+ I + +++L + + + +S +
Sbjct: 131 IWQKKKPTKQNFLAALICITGIGLISLDGNLSIGIGDGLTLVGGLLFSLHIAYLGMKSGQ 190
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ L + + + S G
Sbjct: 191 KDPVLLTIVQFLFAGLWGAGISVFTEDISAIHWTVGQAGSLAYLVIMCTAVAVTFQSIGQ 250
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
R S+ ++ + ++ SV + I F +V+ A+++ S
Sbjct: 251 SRVSSSSASLILSLESVFGVLFSVIFYGEKATVKILIGFALVMAAILISETDLGRKS 307
>gi|37676062|ref|NP_936458.1| hypothetical protein VVA0402 [Vibrio vulnificus YJ016]
gi|37200602|dbj|BAC96428.1| putative membrane protein [Vibrio vulnificus YJ016]
Length = 302
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 84/291 (28%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++WG + + + + +R ++ + + + +
Sbjct: 3 YLLPLFTVLIWGGNSIVNKLAASAIEPSAMSFYRWFVAMAILTPFCL----PHVIRQWQQ 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT S + P+ISVFL L +R++
Sbjct: 59 IKPYLSKLAFLATLGMVLNQSLGYYAGLTTSASNMSLITSLVPLISVFLSVPLLGKRVSA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L +I + + L M + + + Y +
Sbjct: 119 LSLIGGAISLFGLAYMLGQGDVAFFIEQPVTQGDGLMVLAAIVYAAYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + E L + ++ I
Sbjct: 179 WTLIYMQGLFAVAMLTPLWLTSEQLLPSAEALPLIFYAGVAASILAPWMWVKAIDSIGAE 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ + + +L + + + +V+ +++ L +
Sbjct: 239 SSAMFMSLLPVVAVALATSVLGEQVHLYHFVGGLLVIFGVILSQLKPRKKA 289
>gi|325123795|gb|ADY83318.1| hypothetical protein BDGL_002732 [Acinetobacter calcoaceticus
PHEA-2]
Length = 295
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/287 (9%), Positives = 85/287 (29%), Gaps = 7/287 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
++G++F CA L + ++ L ++ ++ + + + + +
Sbjct: 2 NNLIIGSIFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVSQ 61
Query: 79 SLLK----DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + A + I ++ + I + + ++F
Sbjct: 62 KIAFISSTPSKISVFAQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALFF 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
G LKE + +I LL + + I++ L+ + ++ + Y +
Sbjct: 122 GRFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFKL 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G L + Y+ + + L F + +
Sbjct: 182 NGGLFLTKYLLLFGSVYLAVPFLINFHSINFNSDIILGLIGLAVLPTILGFFCTTKALSY 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + E + P+ + + + + ++ + +
Sbjct: 242 MSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIIFGIFLM 288
>gi|317486247|ref|ZP_07945080.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
gi|316922493|gb|EFV43746.1| integral membrane protein DUF6 [Bilophila wadsworthia 3_1_6]
Length = 305
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/306 (10%), Positives = 94/306 (30%), Gaps = 21/306 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T++G + IL+G++ L+T+ + V + ++ R L + + ++
Sbjct: 5 QKKTLIGCVCAVSCEILFGLSYLFTKKITSDVDAVTLLGWRFLLAFIMMNVLLIA----- 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +K +L + ++ + + + P+ S+ +F
Sbjct: 60 GYIDINIKKKHLPSLLKIAVLQPIAYFTCETFGIQMTTASESGSIIACIPIASLVASILF 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC------FARKTIPVGS 192
L+++ Q L ++ +++ G I +
Sbjct: 120 LQKKPTRFQTSGICLTVVGVIVCVTAKGFESSFNGIGYIMLCMAVLSYSLYCVSAEKAYK 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSG---------GEHFFLGNIPDTLFLIGYGLLNSFV 243
+ ++A A F+ F + L +
Sbjct: 180 TTSIEKTYVMIACGACFFATMAIARSIAAGTVVDLFMLPFQNTVFLFSILYLGIASSVLS 239
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F +F+ I + + + +++ VFIL + ++ I+++ + + +
Sbjct: 240 FVLFNISISSIGTNKASSFVGISTAVSVLAGVFILDEKFSAMQCYGTLIILLGVYIANMK 299
Query: 304 TVINSG 309
+
Sbjct: 300 SRFFWR 305
>gi|313682649|ref|YP_004060387.1| hypothetical protein Sulku_1525 [Sulfuricurvum kujiense DSM 16994]
gi|313155509|gb|ADR34187.1| protein of unknown function DUF6 transmembrane [Sulfuricurvum
kujiense DSM 16994]
Length = 293
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 89/295 (30%), Gaps = 20/295 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S T G F+ A L+ + L+ + L + +EV R + L + +
Sbjct: 4 TSSDTRRGIFFMLIASFLFSLIMLFAKLLSASMGSVEVTFWRNVVGLAVIGAITL----- 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K LVF I V F Y + P+ + L
Sbjct: 59 ---RKPIRNVGGKPFTLVFRGVIGTVALLTFFYTISATTLSNAIVYSKTEPIFTALLAFF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-----------AYCFARK 186
L E+L I+A ++ + +++ L + + + + +
Sbjct: 116 LLGEKLKPYSIVAVIIGFAGVALLSGLEMGYLHIMGLLTGFLSSLAYTSVRSLKTYYDER 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
T+ + +L I + + F L + D L++ G+ ++
Sbjct: 176 TVVLSFMFSGVFIPIILMIVSQYVTSEIFAFALSPFVLPHGSDWLWIALMGVAAAYGQIF 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ AK V Y+ L + + + +++ + ++
Sbjct: 236 MTRAYFYAKAGIVSTASYSVVLFATMFGIMLGDIFPTPTVIAGGMLIIASGILLS 290
>gi|310817188|ref|YP_003965152.1| S-adenosylmethionine uptake transporter [Ketogulonicigenium vulgare
Y25]
gi|308755923|gb|ADO43852.1| S-adenosylmethionine uptake transporter [Ketogulonicigenium vulgare
Y25]
Length = 300
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 88/266 (33%), Gaps = 9/266 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G + +L+ I +++ + E + R +++ P + ++ + LK
Sbjct: 4 LHGIALKVLSVLLFLIMASMVKYVSDEIPSGESVFFRSIFAAPVIIIWLMMRGELRTGLK 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ I F A+ + + P++ V L +V L+ER
Sbjct: 64 T-----ANPMGHLMRGIIGTSSMMFGFAAIALLPLPEATAIGYAAPLLVVILAAVLLRER 118
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK---TIPVGSSEGFFIE 199
+ +I A ++ + +LI+ S I VT + I V
Sbjct: 119 VRKFRISAVVMGLAGVLIVLWPSLGAEGGSPIGVTLALCAAFFAALVQIIVRKLVDSEST 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
++ ++ + + + + + L+ G+ + + + A S +
Sbjct: 179 ASIVFWFSISSAALSLLTVPWGWVMPSPFQFTLLVLVGVTGGVAQILMTSAYRYADASLI 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTV 285
EY + L ++ FI +
Sbjct: 239 APFEYVSMLFALIVGYFIFSEVPTIT 264
>gi|261839954|gb|ACX99719.1| hypothetical protein HPKB_1170 [Helicobacter pylori 52]
Length = 298
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 103/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANFCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + + I + + +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGLLSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLIGMFIDIPFLSTGIHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|254477716|ref|ZP_05091102.1| permease [Ruegeria sp. R11]
gi|214031959|gb|EEB72794.1| permease [Ruegeria sp. R11]
Length = 320
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/300 (14%), Positives = 96/300 (32%), Gaps = 16/300 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G L + I + + L + + +++ R + + I+ +
Sbjct: 8 LGILLMLGFCITAPMGDAVAKLLGAHIPLGQLLLVRFAAQVLLLAPLILATGRVWRMQGR 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L+ +L + G L FV P I +FLG L E +
Sbjct: 68 VLRLTFVRTLLHIAGI------GAMFTGLKYLPLADAVAIAFVMPFIMLFLGKFILGEEV 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG---------SSE 194
++++A ++ L++ S + + A+ A FA + S +
Sbjct: 122 GMVRLLACIVGFGGTLLVIQPSFVAVGWHALWPLMVAVIFAFFMLVTRQIAKDTDPISLQ 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
M + +F V L GLL + + ++ ++ A
Sbjct: 182 AVSGSMACGLLAPVFAVGAATDLPILAIVSPTADQWALLAAIGLLGTAAHLLMTWSLRYA 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+T+ M+Y + + ++I + + + + I + A + +L +
Sbjct: 242 PAATLASMQYLEIPVAALIGLWIFDELPNGLAALGILITIAAGLFVILRERQIQLRQAAA 301
>gi|148358222|ref|YP_001249429.1| transmembrane protein [Legionella pneumophila str. Corby]
gi|296105576|ref|YP_003617276.1| transmembrane protein [Legionella pneumophila 2300/99 Alcoy]
gi|148279995|gb|ABQ54083.1| transmembrane protein [Legionella pneumophila str. Corby]
gi|295647477|gb|ADG23324.1| transmembrane protein [Legionella pneumophila 2300/99 Alcoy]
Length = 315
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 81/280 (28%), Gaps = 8/280 (2%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F+F + WGI+ + L ++ E++ +R+ +F F ++ + +
Sbjct: 7 FLFLGTLGWGISLYLMKILLVSLTPTEIVLYRMAIGAASLFILAKLFKLKTDNIRGLILD 66
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
VG + + + + VF S LN L
Sbjct: 67 GIIVGTFNMTLPFYLTTYAVKTVSSSLASVINGLTPLCTLILGMVFFSSKQKLSVLNLLS 126
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMC 201
I+ + I+ + + I+ +A F +
Sbjct: 127 IVLGFIGIIIINSDVSIYQGSAVEFIALLATTISYGVTANYFKYHARTKDPILVSAVSAF 186
Query: 202 VLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V AI L + S L + + F ++ I+ A
Sbjct: 187 VSAITMLIFKCATESSINYWGIPQDMHQIIALLWLGVIGSGFCLYLYCSLIQNAGAVFAS 246
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ Y + ++ + L + I I + ++++
Sbjct: 247 MITYLMTITGVIMGMIFLHETISHQVMIGCIFIFFSLILV 286
>gi|118593189|ref|ZP_01550575.1| hypothetical protein SIAM614_08549 [Stappia aggregata IAM 12614]
gi|118434274|gb|EAV40929.1| hypothetical protein SIAM614_08549 [Stappia aggregata IAM 12614]
Length = 306
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 85/261 (32%), Gaps = 6/261 (2%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
V ++I +L++ + ++ P+ +++F A + +
Sbjct: 30 ASYPVFQIIFFTMLFAFVPMSMMMLA------DKAVDNFRPRHPWLVLFRAGLAIIAMSC 83
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
YA F P++ L L E + + A ++ ++ +LI+
Sbjct: 84 GFYAFTALPLAEVYALLFAMPLLITALSVPLLGETVRAQRWAAVIVGLVGVLIVLRPGVT 143
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
L A +A+ + TI V G ++ P + + + + +
Sbjct: 144 ELTLGHAAALTAAFANSLSTILVRKLGGKERPAVLILYPMILSMTAMSMTLPVFYVPVEL 203
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
D + G L+ + K A + V ++Y+ L + V + D
Sbjct: 204 LDLGLMAAIGFLSVVAQFLTISAYKAAPAAVVAPLQYSQILWASLFGVLFFSETPDFYVG 263
Query: 288 IVFGIVVIAMVVYLLPTVINS 308
+ I++ + + + +
Sbjct: 264 LGSAIIIASGIFVVWRESREN 284
>gi|297183018|gb|ADI19164.1| 7 permeases of the drug/metabolite transporter (dmt) superfamily
[uncultured delta proteobacterium HF0130_05G09]
Length = 287
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/290 (16%), Positives = 98/290 (33%), Gaps = 14/290 (4%)
Query: 29 FVFCAYILWGITPLYTQFL------EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ A L IT L + L + L++ + R L+++ + F + +S
Sbjct: 1 MMVAASSLIAITTLLAKVLGLGSEDTPLHPLQITAGRFLFAMMALAFFFLLKRFTISA-- 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + ++ F+ P+IS+F+ FL ER
Sbjct: 59 ------PDYRIHFSRSFLGWLGVTLMFASVNYIPISDAISISFMNPIISMFIAIPFLHER 112
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ L+ AAL+ + LI+ A +A CF ++I + + +
Sbjct: 113 IGRLRWFAALISFMGALILLRPGLESFQWAAFFAFGAALCFGFESILIKKLSQTESPLQI 172
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + + + + + L G++ +F +KR+ S
Sbjct: 173 LTLNNIIGCILSLTVTSLVWTNPSSTQWFQLAALGVIMVSAQALFIQSMKRSDASYALPF 232
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
Y + V FI D V + +V ++ + + K K
Sbjct: 233 LYITLVFASVYDYFIFTTHPDWVSLLGAMTIVSGALLLGIGESVRKEKGK 282
>gi|294776158|ref|ZP_06741647.1| putative membrane protein [Bacteroides vulgatus PC510]
gi|294449981|gb|EFG18492.1| putative membrane protein [Bacteroides vulgatus PC510]
Length = 290
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/284 (9%), Positives = 86/284 (30%), Gaps = 20/284 (7%)
Query: 29 FVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+WG T + T+ L +S ++ +R + ++ +
Sbjct: 1 MAIITVAIWGTTFVSTKILIQHGLSPSDIFFYRFTLAYLCMWCISY-------KKLFANR 53
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +L+ +++ AL S +PV++ L +F ++
Sbjct: 54 VKDELLLLLAGLCGGTIYFITENTALGITLASNVSLIVCTSPVLTTLLSYLFRRKEPFTR 113
Query: 147 QII-AALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSEG 195
++ +++ ++ + ++ + L + + +
Sbjct: 114 HLVYGSIMALIGVGLVVFNGSFILKINPLGDILSLTAALMWAFYCLILKQLDNHYSIVFI 173
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L ++ + + I L + + F ++ +K
Sbjct: 174 TRKVFFYGVLTILPMFLFRPLNWDNVLMMQPIVFGNLLFLGFVASMLCFIAWNACVKELG 233
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ +++S I+ + I + +++ + +
Sbjct: 234 AVKSTNYIYIVPLVTLLTSAVIINEKITWIALTGCFLILCGVYL 277
>gi|293391865|ref|ZP_06636199.1| ribosomal protein L11 methyltransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952399|gb|EFE02518.1| ribosomal protein L11 methyltransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 287
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 78/285 (27%), Gaps = 2/285 (0%)
Query: 29 FVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVF-FAIVYFSGGLSLLKDTLK 86
++ A LW + + ++ + + ++ R+ + V + + ++ +
Sbjct: 3 YILIALCLWSSSFVAGKYTYTMLDPVLMVQMRLFIATAIVLPMFVRVWKRVPKEIRPQVW 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + T G +
Sbjct: 63 WLAFLNYPAIFLLQFIGLSHTSASSASTMLGLEPFLVVLIGRFFFGDKAKTHHWIFGLIA 122
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ ALLI + L L V +++ + I V + + ++
Sbjct: 123 FLGVALLISGGEETGNISIFGCSLVLFAGVVFASCLRWTQKIIVQLTAQVYTTSSIVLGT 182
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ L + + +++ GI + GI+
Sbjct: 183 ITCLPFTLWLTQSWQIHWNWQGIAGLLYIGIGCSWLAYYLWNKGINSVDSNLAGILVSLE 242
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ I+ +V +L + I + + VV ++ + + N
Sbjct: 243 PVFAIILAVLLLGENISPLSWLGILAVVSTTLISSVYPRLVRRAN 287
>gi|289167876|ref|YP_003446145.1| hypothetical protein smi_1033 [Streptococcus mitis B6]
gi|288907443|emb|CBJ22280.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 304
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 89/288 (30%), Gaps = 12/288 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + G + ++L E+ L + R + + + F G +++
Sbjct: 10 LISILLTTLFMGSSFPTGKYLIVVEKTPPLLLGGVRFIIAGLVMLVLSFLFGKGGTIIPK 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQ---GFLTSFSYFVTPVISVFLGSVFLK 140
+ + +LV + +L L ++S F P+ FL LK
Sbjct: 70 SQGSKIKGFILVVTIGLLQTAGTMGFLNLALAHDVSSSMSSIILFTNPLWLAFLAHFLLK 129
Query: 141 ERLNHLQIIAALLI------ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ L +I A +L + L + G L +K
Sbjct: 130 DTLTIQKISALILGVAGVVTCIGLDVSAFSLGALFALLGSFCWSINTVVTKKIPFDNGPW 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F +L L+ LG F+ + F ++ Y + +
Sbjct: 190 IFTAWQLLLGGVFLYLFSIPVHESYNFLNLGFWGWVWFIWLIIPASVGSFGLWFYSLGQR 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + P+ + S+ L +P + +VV+A+V+
Sbjct: 250 GATVASSFLFLVPVFSTIFSIMGLHEPFTLNLVLGGSMVVLALVLVNW 297
>gi|226952181|ref|ZP_03822645.1| drug/metabolite exporter family transporter [Acinetobacter sp. ATCC
27244]
gi|226837019|gb|EEH69402.1| drug/metabolite exporter family transporter [Acinetobacter sp. ATCC
27244]
Length = 306
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 91/293 (31%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++W + T+++ +S + + +R L + + ++ L
Sbjct: 12 FVLPLIAVLIWSLNIAVTRYVADYISPVSISFYRWLVAFLILTPFMLPKIWQQRALI--- 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ + LK+R N
Sbjct: 69 -RPLIPKLAVLSAFGMVLYQGLSYAAAHYTTATNMGIVNAFVPIFTIFISYLILKDRPNR 127
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I+ ++L LL + G + + Y F + +
Sbjct: 128 FAILGSVLSFAGLLYVMGQGHISSLFMQGGHWGDAVMVLAVGFYAFYGVFLKKWQLKLPL 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ + + ++ ++ +
Sbjct: 188 MTSLYVQIGFALVYHLPFLLWFGLDWINAENAASVIYAGVFPSLIAPLLWMLAVQVIGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I P+ + + F L + +I ++++ +++ ++ +
Sbjct: 248 RTSIFMNLMPVFTAIIASFWLAESWTIYHSIGGFMILVGIILAQKKSLKLPSR 300
>gi|254303573|ref|ZP_04970931.1| hypothetical protein FNP_1229 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323765|gb|EDK89015.1| hypothetical protein FNP_1229 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 288
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/293 (9%), Positives = 82/293 (27%), Gaps = 11/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ A I+W ++ L + + V L + R L + I
Sbjct: 2 KNNSKAYFLIIAAVIIWSLSGLLVKAV-NVDPLWISLIRCLGGGIFLLPYIF-------- 52
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
P + + + + + ++ VI
Sbjct: 53 --KEKIYPIKNILFGGIFMAIFLLSLTITTRISSSAMAISMQYTAPMYVIGYGFYKSKEI 110
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + + I+ I ++ G ++ A+ F + +
Sbjct: 111 KFEKFIVFLLIFAGIIFNSITNMNGGNWWAIVSGITIGLAFVFYSYNLQKVKKGNLLGIV 170
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I + + + I +++ + ++ G++ +
Sbjct: 171 ALINIISAIFYGILLLFRYSPPPSSFNEIIILSISGIVISGISYALYGEGLREVSMEKAM 230
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I+ P+L + + I +++++ +V + ++ N+ K K
Sbjct: 231 IICLAEPVLNPLWVYLGKGEIPSMTTVIGSTLILLSAIVDITFSIKNNKKAKK 283
>gi|56695861|ref|YP_166212.1| hypothetical protein SPO0959 [Ruegeria pomeroyi DSS-3]
gi|56677598|gb|AAV94264.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 338
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 81/260 (31%), Gaps = 8/260 (3%)
Query: 50 VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI 109
+ L++ R L++L + + L + G+ + +
Sbjct: 86 LPALQISHGRFLFALAVILSIVAATRPRL--------SRPHWGLHLGRTSFGWAGVTLMF 137
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL 169
A+ + F+ PV + L L ER+ + AA++ ++ LI+ +
Sbjct: 138 AAVAYIPMADATAIAFLNPVFGMLLAIPLLGERVGPWRWGAAVIALVGALILLRPTPGSF 197
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
A+ +A + I + G + +L + + + +
Sbjct: 198 QPAALLALAAAAVMGMELIFIKKLAGRERPIQILLVNNAMGLAIASLAVWPVWQAPLPAQ 257
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
L G GLL + F G+ RA S V Y + + + + + D +
Sbjct: 258 WAALAGIGLLMACAQICFVNGMARADASFVAPFSYGTLVFAALYDLAVFQVWPDAISLGG 317
Query: 290 FGIVVIAMVVYLLPTVINSG 309
I++ +
Sbjct: 318 AAIILTGALTLAWREGRVRR 337
>gi|84684861|ref|ZP_01012761.1| Possible transporter, RhaT family, DMT superfamily protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84667196|gb|EAQ13666.1| Possible transporter, RhaT family, DMT superfamily protein
[Rhodobacterales bacterium HTCC2654]
Length = 300
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 90/283 (31%), Gaps = 6/283 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + G LF+ A L+ + + + + V+ L ++ GV + +
Sbjct: 1 MDNIRGALFMTLAMGLFASEDVLIKMVLDCVPMGVV----LIAVGGVGAIVFALMAQMRG 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ +++ + L F I L S P+ +FL
Sbjct: 57 HSAFTRQFFHPVIVIRNLGELVGTACFVIGLTQV-PLGLLSALLQANPLFVNIGAILFLG 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-AVTWSAYCFARKTIPVGSSEGFFIE 199
+ + +A + ++ ++++ A+ + + R + G
Sbjct: 116 MTVGWRRWLAIGVGLIGVVVILRPGFDAFQPSALLGLGAAIGLAVRDVATRITPPGIHTL 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + L ++ D LI L + + + ++ + V
Sbjct: 176 QTSSWGFLMGTISGALLLVVDPPVLPSVGDAGILIAATALGMAGYYLLTRAMQTGDVPAV 235
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
YT + ++ ++ + D + + ++V A V LL
Sbjct: 236 TPFRYTRLVYAMIFALVFFAEVPDALTLLGAALIVGAGVYTLL 278
>gi|332653460|ref|ZP_08419205.1| putative membrane protein [Ruminococcaceae bacterium D16]
gi|332518606|gb|EGJ48209.1| putative membrane protein [Ruminococcaceae bacterium D16]
Length = 293
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 90/293 (30%), Gaps = 15/293 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WGI+ L T L ++ + + R L + +
Sbjct: 9 LMLVLVTFFWGISYLLTDLALGELGPFTLNALRFLIAFAAAGLLFF--------RRLRSP 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + L + F + + F +T V + L +F + R +
Sbjct: 61 SRATLKLSLCTGVALLSIYSFNTFGVKYTSLTNAGFLCAMTVVFTPLLDYLFFRTRPSRK 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS------SEGFFIEM 200
+ ++ + + ++TL S + I A A + F + +
Sbjct: 121 LFVVLVMSVTGIALLTLSSALRPALGDILCILCAVSNAAYLLITERGVAGQEINAFQLGI 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++ + L+ F I + ++ S VG
Sbjct: 181 YQQLFAGLGMLILSLIFETPTLPRSPAVWGSVLVLALFCTGAAFLIQAVALQYTTASHVG 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++ P+ + + F+ + + +++ +++V + + +
Sbjct: 241 VIFCLEPVFNSILAFFVAHEVLTPQAYFGGLLLLASLLVMETDLTLLFRRRQK 293
>gi|261879312|ref|ZP_06005739.1| integral membrane protein domain protein [Prevotella bergensis DSM
17361]
gi|270334142|gb|EFA44928.1| integral membrane protein domain protein [Prevotella bergensis DSM
17361]
Length = 313
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 90/288 (31%), Gaps = 10/288 (3%)
Query: 20 SLPTMMGT-LFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
M+G L ++WG T + ++ + ++ E+ R +S +
Sbjct: 3 KKKGMIGYHLLAAVVVLIWGCTFVNSKVLLMNGLTAHEIFVLRFFFSYIC--IWTISPHR 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +G+ S + + I + + + T + +FL
Sbjct: 61 LWADSVKDELLFVLLGITGGSLYFVTENEAVMIDYVNNVSFIVCTAPLLTTLLALLFLKG 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR-----KTIPVG 191
V + L A L + L + + L +A++ + +
Sbjct: 121 VTANKGLVLGSAAAVLGVALVVFNGQFMLNLNPLGDMLALSAALSWAVYSLLLRRMAGYN 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ L + + + FL T L + + F +S+
Sbjct: 181 VVFVTRKVFFYGLVTVLPMFLVHPWQFPLEGFLKPAVWTNLLFLGFVASFGCFVFWSWVS 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
KR Y P+ +V S +L +P+ + + G++++ + +
Sbjct: 241 KRLGALKASNYIYLNPVSTVVFSALVLDEPMTWLAYVGSGLILLGVYL 288
>gi|224585559|ref|YP_002639358.1| hypothetical protein SPC_3844 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224470087|gb|ACN47917.1| hypothetical protein SPC_3844 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 315
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 103/298 (34%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T G L V A +LWG + + Q++ + +S + R+L++ G+ F G
Sbjct: 18 STRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFA--GLILVRFSFMHGD 75
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A+ +L+FS F+ + + F++P I V ++
Sbjct: 76 KIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA 135
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ R L + A L ++ ++ H L IA ++A + +
Sbjct: 136 RRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLI 195
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + ++ G HF + F + S F ++ G
Sbjct: 196 AQYGTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGA 255
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ PL + S+ +L + +++ ++++ L + +
Sbjct: 256 QLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRAR 313
>gi|183984089|ref|YP_001852380.1| membrane permease [Mycobacterium marinum M]
gi|183177415|gb|ACC42525.1| conserved hypothetical membrane permease [Mycobacterium marinum M]
Length = 442
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 80/287 (27%), Gaps = 7/287 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGI-TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ T + L + + I + + T L R+L++ +
Sbjct: 1 MASRTPLPVLMILGSCISLQLGAAIATPLLAHFGAGLTTGVRLLFAATLLMAI-----HR 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ ++ + + + + I + F+ + +
Sbjct: 56 PRAFGWDRQQWRSAALFAVALAGMNGFFFAAIARIPLGVAVTIEFAGPLMLAAAFSRRPR 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L + I L S + +A + A G G
Sbjct: 116 DLGCVMAAAAAIVVLSWDGSKSAALSPDLAGVAFALVAACFWALYILAGKRITGQQTGHG 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ I A+ + + + L L + + + ++R
Sbjct: 176 ALSVSMFIAAIVVLPFGIPAVPTLTGQP-EKLIPLLGVAVLSSMLPYSLEFAAMRRFSAH 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
T G++ P++ ++ +L Q + VR + +VV A ++ L
Sbjct: 235 TFGVLLSLEPVVAGLAGWILLGQTLSWVRGLAMVVVVAASIICTLSQ 281
>gi|48477702|ref|YP_023408.1| transporter [Picrophilus torridus DSM 9790]
gi|48430350|gb|AAT43215.1| transporter [Picrophilus torridus DSM 9790]
Length = 291
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 100/289 (34%), Gaps = 14/289 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +WG+T + + L +S + +++ R + S + I ++ L
Sbjct: 8 LLLLIFVVFIWGLTFPFMKITLYYISPVVLLAFRFIISSILLIPLI--------KKRNFL 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + + + +L + + F L + + V+ + +L + N
Sbjct: 60 LEKKHLKYGLSAGFMLFLAYYFQTVGLKYTTPSQSGLITGLYVVMLPLISYFYLHIKANR 119
Query: 146 LQIIAALLIILSLLIM-----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+IA +L L+IM + + I + A A +
Sbjct: 120 GDLIAVMLGTAGLIIMSKIDFSGSYLFGDVLTLICAFFYAMQTAYVFKYSRDLDSGVFTF 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + + ++ + I + L +F I + + + + G
Sbjct: 180 YQLIVVGVLSAILISYNPDISGLVVPIVIFTLIFTAALAGTFAIYINTRALMYVEPTAAG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ P+ ++SS+ IL + + I I++ M+V + + +
Sbjct: 240 IIYVGEPMFAVLSSIIILGEIPNIYTIIGGIIIISGMLVESIDKYLAAK 288
>gi|30020805|ref|NP_832436.1| drug/metabolite exporter family protein [Bacillus cereus ATCC
14579]
gi|229128021|ref|ZP_04257003.1| Uncharacterized transporter [Bacillus cereus BDRD-Cer4]
gi|229145258|ref|ZP_04273647.1| Uncharacterized transporter [Bacillus cereus BDRD-ST24]
gi|29896357|gb|AAP09637.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
gi|228638097|gb|EEK94538.1| Uncharacterized transporter [Bacillus cereus BDRD-ST24]
gi|228655296|gb|EEL11152.1| Uncharacterized transporter [Bacillus cereus BDRD-Cer4]
Length = 304
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 82/263 (31%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ L SVFL E++ +
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILASVFLNEKMKLNGWL 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVISFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|21220199|ref|NP_625978.1| hypothetical protein SCO1704 [Streptomyces coelicolor A3(2)]
gi|5441778|emb|CAB46802.1| possible integral membrane conserved hypothetical protein
[Streptomyces coelicolor A3(2)]
Length = 324
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 80/283 (28%), Gaps = 2/283 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P ++ +LW + + + ++ L S AI
Sbjct: 14 HRRPDLLAAGAATVTVVLWASAFVSIRSAGEAYSPGALALGRLLSGVLTLGAIWLLRREG 73
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + G+L F ++ ++WG T + + + + LG
Sbjct: 74 LPPRAAWRGIAISGLLWFGFYMVVLNWGEQQVDAGTAALVVNVGPILIALLGARLLGDAL 133
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLS--LAIAVTWSAYCFARKTIPVGSSEGF 196
L + + A + + L + +A A + + +
Sbjct: 134 PPRLLTGMAVSFAGAVTVGLSMSGEGGSSLFGVVLCLLAAVAYAGGVVAQKPALAHASAL 193
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + A+ + + G E + + F ++Y + R
Sbjct: 194 QVTTFGCLVGAVLCLPFAGQLVHEAAGAPVSATLNMVYLGVFPTALAFTTWAYALARTTA 253
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+G Y P L+++ S L + + + + + V
Sbjct: 254 GRMGATTYAVPALVVLMSWLALGEVPGLLTLAGGALCLAGVAV 296
>gi|322390129|ref|ZP_08063663.1| DMT superfamily drug/metabolite transporter [Streptococcus
parasanguinis ATCC 903]
gi|321143160|gb|EFX38604.1| DMT superfamily drug/metabolite transporter [Streptococcus
parasanguinis ATCC 903]
Length = 303
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 97/300 (32%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
TM GTL A I WG++ Q+L + + + + R+++S +
Sbjct: 2 SKTMKGTLMTLIAGIAWGLSGACGQYLLAHGFTAIGLTTIRLVFSGAVLLLLAYLADQEK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
T ++ +L L + ++ A+ + ++ P+ + V
Sbjct: 62 VKAFLTDRSSYIPLLLFAFLG-LLMTQLTYLEAIDATNAGTATVFQYLCPIGVLAYSCVK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVG 191
+ +I + +L I ++ H L+ + ++ + I +
Sbjct: 121 DRVAPTVSEIFSMILAIAGTFLIATHGQLNQLAITPKGLAWGLVSAFAYALYIILPIQLI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G + + + + ++ H + + F + +F G
Sbjct: 181 QKWGSMLVIGIGMLIPGLVMIPFTGRRLFHGQYSMDNLMGLVGLVVIGTIFAYTVFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ + + I+ + + I +++ A+++ L ++ +
Sbjct: 241 TLIGPVKGSLLAAIEPISAVFFAFAIMNEHFFAIDFIGMAMILFAVLLISLKDLMIQKEK 300
>gi|312132179|ref|YP_003999519.1| hypothetical protein Lbys_3518 [Leadbetterella byssophila DSM
17132]
gi|311908725|gb|ADQ19166.1| protein of unknown function DUF6 transmembrane [Leadbetterella
byssophila DSM 17132]
Length = 301
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 103/291 (35%), Gaps = 18/291 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF+ A IL G T + + + Q++ + +R+L S +F ++
Sbjct: 5 YLFLHIAVILAGFTGILGKLI-QLNEGLLTWYRILISSLALFIILLITKTPHP------- 56
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + I+ +HW FF ++ + Y +T + L K++
Sbjct: 57 -KDDKLRMAGTGCIIMIHWLFFYGSIKYSNVSIGVVCYALTSCFTALLVPFIQKKKFVFS 115
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGFFIE 199
+++ +LL IL + ++ + + A ++ F+
Sbjct: 116 ELLLSLLTILGIGLIFHFDTTHQTGIILGIISSLFAALFTIVNEGWVRKYDTRIINFYEI 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L ++ ++ F LI + ++ +FS +K+ TV
Sbjct: 176 LGGTIALTLLLPLYLYLFPTDYIFPDLKDGIYLLILGLVCTVGLYQLFSEALKKIPAFTV 235
Query: 260 GIMEYTAPLLMIVSSVFILKQP--IDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P+ I+ + + K+ ++ I V++++++ T+
Sbjct: 236 NLTFNLEPVYAIILAFILFKEAHEVNQYFYIGLVCVMLSVLLQTWLTIKRQ 286
>gi|254725145|ref|ZP_05186928.1| transporter, EamA family protein [Bacillus anthracis str. A1055]
Length = 301
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/282 (10%), Positives = 89/282 (31%), Gaps = 14/282 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + I+WGI ++ L + + +E + R++ + P + + ++
Sbjct: 8 LLILAVVIIWGINFTIAKYGLLEFTAIEFTALRMISAAPLMLLLTFFI-----EKSVYME 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+++ S + ++ F+ + S ++P+ + +E+ +
Sbjct: 63 RKDIPRLIIVSVVGIVLYQTLFMETVKYTSATNASLLISISPIFTTVFAIFLKQEKFSSR 122
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++I +++ ++ + G + + A I S+
Sbjct: 123 KLIGSIIAFGGAALVLVAGHSLASSFYGNGIGLITSICWGLYPVLAGPLIKKYSALRVTA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ L + + L + F ++ G+++ S
Sbjct: 183 WSALVGAIPLLLLSGPHVFTMPFHITHGMTLFALLYSIFFVTVFGLVMWYVGVQKIGASH 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ Y PL+ ++ + + + + I I +
Sbjct: 243 TMVYMYITPLVAVLFAAVWADEYVSFQQIIGGIINFFGLWFV 284
>gi|254461214|ref|ZP_05074630.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206677803|gb|EDZ42290.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 294
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 89/297 (29%), Gaps = 14/297 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL------EQVSVLEVISHRVLWSLPGVFFAIV 72
+ + + CA T L + L E + L++ R L++ + A +
Sbjct: 5 PETNPRLAMVLMICATAFIAATTLLAKALGTGALGEPLHPLQITHARFLFAALTLGTAGL 64
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + V A+ ++ + F+ PV ++
Sbjct: 65 IMRPKFG--------MVNMKLHVVRTLCGAMGVTLMFASVAYIPLSDATAISFLNPVFAM 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L E++ ++ AA + + LI+ + A+ +A + I +
Sbjct: 117 IFAVFLLGEKVGMVRWSAAGVAMTGALILLRPGSGTIAPGALLALGAALILGLEIISMKR 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+L + +V + + + L L G G L + F +
Sbjct: 177 LSKREAPFQILLVNNAIGLVIATLAVVFVWQAPTMMQWLALAGVGSLMAAAQTCFLNSLA 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
RA S V Y L + I +V + GI+V + +
Sbjct: 237 RADASFVVPFSYGTLLFASLYDAAIFGVIPTSVSLLGAGIIVAGAALLAWRETRLAK 293
>gi|83942541|ref|ZP_00955002.1| Possible transporter, RhaT family protein, DMT superfamily
[Sulfitobacter sp. EE-36]
gi|83846634|gb|EAP84510.1| Possible transporter, RhaT family protein, DMT superfamily
[Sulfitobacter sp. EE-36]
Length = 289
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 93/295 (31%), Gaps = 11/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G L + + + + I ++ + + + + ++I +V L
Sbjct: 1 MDNLRGALIMVLSMLGFAIEDMFIKLIGTDIPIGQIIFMLGTGGALCYGAMVVMKGEPLM 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + T+ V A++ S TP++ ++FL
Sbjct: 61 DRAMLTRPILLRALGEIVGTLGFV------SAIVLTPISSASAILQATPLVVTLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + + A L+ +L +L++ +L++ + + +
Sbjct: 115 GDPVGWRRWSAILVGMLGVLLVIRPGMDSFQALSLLAVLGVLGLSLRDLATRRVPQSTST 174
Query: 200 MCVLAIPALFYVVWNGFSG---GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + L V + G F + LF+ + ++ ++
Sbjct: 175 FQLSFLAFLALVPASLLFMLGTGTAFAPMSGVQWLFMGAALTTGMVAYYGIVAAMRIGEI 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
S V Y L +V + I + D + + I+V + +Y + +
Sbjct: 235 SFVTPFRYARLLFAMVVGITIFGERPDLLTYVGATIIVAS-GIYTVWRERKVKEQ 288
>gi|68479993|ref|XP_716044.1| hypothetical protein CaO19.2204 [Candida albicans SC5314]
gi|68480124|ref|XP_715985.1| hypothetical protein CaO19.9749 [Candida albicans SC5314]
gi|46437633|gb|EAK96976.1| hypothetical protein CaO19.9749 [Candida albicans SC5314]
gi|46437694|gb|EAK97036.1| hypothetical protein CaO19.2204 [Candida albicans SC5314]
Length = 460
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/277 (8%), Positives = 68/277 (24%), Gaps = 23/277 (8%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
+ +++ R+ + + K + + F
Sbjct: 134 TPIHPAQILFVRMFITYICCLLYMAITRSVPDAPFGPKPIRKLLLLRGLVGFFGVFGMYF 193
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
+ L +F + F+ L + + +L ++ + T G
Sbjct: 194 SLQYLSLSDAVALTFLVPMVTAFLAFVLLHEKYSILEAICSVFSLAGVVLIAKPTFIFGN 253
Query: 168 PLLSL-----------------------AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
S+ + I + + + L
Sbjct: 254 ESNKETGNDETIESSSSEKRILATIVGLIGVCGASSVYIVLRKIGMNAHPLLSVSYFALT 313
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ ++ N G F+ + G++R K + +M Y
Sbjct: 314 CCIVTFLAILVIPSLTFVLPTNAYQWTLFFIIGFSGFFMQFSLTAGVQRVKAARASLMAY 373
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + +V + I + + +++ ++ L
Sbjct: 374 SGMIFAVVWDLTIWHHFPGILSFLGITLIIGNAIIIL 410
Score = 43.7 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 35/120 (29%)
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + + + G P L+ GL+ F
Sbjct: 131 NFNTPIHPAQILFVRMFITYICCLLYMAITRSVPDAPFGPKPIRKLLLLRGLVGFFGVFG 190
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ LS + + P++ + +L + + I + +V+ PT I
Sbjct: 191 MYFSLQYLSLSDAVALTFLVPMVTAFLAFVLLHEKYSILEAICSVFSLAGVVLIAKPTFI 250
>gi|332704314|ref|ZP_08424402.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
gi|332554463|gb|EGJ51507.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
africanus str. Walvis Bay]
Length = 298
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 95/292 (32%), Gaps = 2/292 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
GT F + I +G+ + + + + + V V+ R L+ +F ++ + L L
Sbjct: 2 WQGTFFSLLSGIAFGLLGVLAKLGYAQNMPVGLVLQCRFLFGAAFMFLFLLGWRRRLLRL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
A +V + + + ++ + ++SV L + L
Sbjct: 62 DLPGLAMVAAIGMVLYYAQSSFFFHSVEHIPVSTTVLILYGYPVTVTLLSVVLYKLRLTR 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L I+ + L L P L + + + +
Sbjct: 122 LLVLSLILVSAGCGLICYDAFLRELNPTGLLYAFGALGCFTIYLLLVQKVMQGRHPLSVS 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
I G L + L + + + I+R + I
Sbjct: 182 FYMILFTGLSFLLLQGPGTLASLRMSNLPIALGLGFIPTALAITLLFLAIERIGSAHAAI 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ P+ +V++ IL +PI T++ + +++ +++ L T + +++
Sbjct: 242 FSSSEPVAALVAAHLILGEPIVTLQVMGMLLILAGVILPNLKTAVILRRSRA 293
>gi|319650571|ref|ZP_08004711.1| hypothetical protein HMPREF1013_01316 [Bacillus sp. 2_A_57_CT2]
gi|317397752|gb|EFV78450.1| hypothetical protein HMPREF1013_01316 [Bacillus sp. 2_A_57_CT2]
Length = 304
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 77/273 (28%), Gaps = 13/273 (4%)
Query: 35 ILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
ILW + LE S + R+L + + L +KD +
Sbjct: 17 ILWASAFPGIRAGLESYSPEHLALFRLLVGSAALGVLALLTRMRLPDIKDFPAIFILGFL 76
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
V+ T S +TP+ S L ++FL+ER ++ + +
Sbjct: 77 G------FTVYHTALNIGEKTVSAGPASLIVSMTPIFSAALAALFLRERFGRVRWTGSAV 130
Query: 154 IILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+++L +G +A + F +T +
Sbjct: 131 SFAGAALISLGAGGGFEIQTGILFVLLASISESIYFVFQTKYFNKYGFLSFTSYTVWAGT 190
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
F +++ G E F + + ++ S Y P
Sbjct: 191 GFMLIYLPGLGNEIFHASAESTLSVIYLGIFPTVIPYIALAFLASIGGTSEATSSLYLTP 250
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ V + L + + I + +++
Sbjct: 251 AIAFVIAWVWLGEVPTMLSVAGGIIALAGVMII 283
Score = 36.0 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 19/73 (26%)
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
I L + + G K ++ P+ + L++ VR
Sbjct: 70 IFILGFLGFTVYHTALNIGEKTVSAGPASLIVSMTPIFSAALAALFLRERFGRVRWTGSA 129
Query: 292 IVVIAMVVYLLPT 304
+ + L
Sbjct: 130 VSFAGAALISLGA 142
>gi|311744497|ref|ZP_07718297.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312116|gb|EFQ82033.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 314
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/306 (9%), Positives = 82/306 (26%), Gaps = 22/306 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
S +G L V A +L+G+ ++ S R+ + ++
Sbjct: 2 TSRSPRLGYLLVVAAAVLFGVNAGVSRIPLRSGTPTDTFTSVRI---TAALAVLVLVAVA 58
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + ++ + + A+ + ++ PV+ V
Sbjct: 59 VDRAALRPPRGRSLLLVVGLGLVGVTGVQWTYNVAINRLPLGIALLLEYLGPVLVVLWVR 118
Query: 137 VFLKERLNHLQIIAALLIILS------LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
E + A L +L + G+ + +A A F V
Sbjct: 119 FVRSEPVAPRMWPALGLAVLGLAVVSRIWSGLEFDGLGVAMALLAAVCFATYFLLGERGV 178
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSG-----------GEHFFLGNIPDTLFLIGYGLL 239
+ + + A + + G + L
Sbjct: 179 DADSPLQVIVWSFAAATVVMNLVQPVWTADALGADASALGRFDEVVVPAWAAMGWVVVLG 238
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F + ++ + V ++ P++ + ++ + ++ + +V+ +V+
Sbjct: 239 TVAPFFLLLVALRMLSATIVSVVAMLEPVVAALVGWGWFRETLTPLQILGMAMVLSGVVL 298
Query: 300 YLLPTV 305
Sbjct: 299 AQTSRR 304
>gi|289582844|ref|YP_003481310.1| hypothetical protein Nmag_3198 [Natrialba magadii ATCC 43099]
gi|289532397|gb|ADD06748.1| protein of unknown function DUF6 transmembrane [Natrialba magadii
ATCC 43099]
Length = 307
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 76/285 (26%), Gaps = 23/285 (8%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG +++ + V L + RV + + + L +
Sbjct: 27 WGGLYGVSKWGFDAVPPLTLAFLRVAVGAVALLTVVNLVYPRRRFSRRDLLS------FT 80
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
F ++A S +TP+ ++ LG L E L+ + +
Sbjct: 81 FLGAVVAASLATQFVGTALTTASQGSLITVLTPIFTILLGVSLLGEDLSPRLVAGITIAT 140
Query: 156 LSLLIMTLHSGI----------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+I+ +L L +A A +
Sbjct: 141 AGTVIVLSGQYHLAELAGVATTGILMLLLASATWALYTVLGKPLIERYSALETATYSCVA 200
Query: 206 PALFYVVWNGF------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
V + + L L + + ++ G++ S +
Sbjct: 201 AVPMLAVLVPVELARTEASLSSIPVTPELIVAVLYLGLLGTAAAWYLWYKGLEYVDASVI 260
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ P++ + +L + + + + ++ + + + +
Sbjct: 261 SAFFFLQPVVGAIFGAAVLGESLGSRFVLGGAVMAVGVYLVSTES 305
>gi|28870751|ref|NP_793370.1| rarD protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28853999|gb|AAO57065.1| rarD protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|331015870|gb|EGH95926.1| rarD protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 307
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 113/295 (38%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A +L+G+ YT ++ + E+ R+L ++P ++ + L
Sbjct: 16 KGVVLSVLASVLFGVMYFYTSLMKPLDGEEIFGWRMLLTVPCATLFMLVSGDWRRVRDLA 75
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + L+ S+ +L F++A L + S YF+ P+ +F G V E
Sbjct: 76 ARLWQRPLLIFGLLLSSMLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMIFTGRVVYGE 135
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L++LQ +AA ++ + G + F + G +
Sbjct: 136 HLSYLQKVAAAFAMIGVGHELWRLGSFSWETLLVAGGYPLYFVLRRKLKTDHLG---GLW 192
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L +W +G H L + G++++ + + S G+
Sbjct: 193 FDMLLMLPIGLWFISNGHPHAIQQAPLLYLLIPLLGVISASALVSYIVASRLLPFSLFGL 252
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y P+L++ ++ + + I + + + +A+VV ++ + + + +
Sbjct: 253 LSYVEPILLVGVALLLG-ESIGRDEWLTYLPIWLAVVVLMIEGAKHMLVQRRRDA 306
>gi|50121984|ref|YP_051151.1| hypothetical protein ECA3061 [Pectobacterium atrosepticum SCRI1043]
gi|49612510|emb|CAG75960.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 292
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 85/277 (30%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A ++W + + + + + +R L + + ++ +
Sbjct: 4 LFPIIAVLIWSVNVIVNKLSANVIDPAAISFYRWLLAFIVMTPFMLPGLRHHATAIRQHA 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
V L+ ++ + G + S +T ++S+ L V +
Sbjct: 64 WKLLVLGLLGMVLYQSLAYYAAHTISAVMMGIMGSLVPLLTVLLSIPLLRVAPTLGVLLG 123
Query: 147 QII----AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++ LI L GI + +Y S
Sbjct: 124 SLLSLAGIVWLISGGHPEQILAQGIGPGEFMMFCAALSYAIYGVLTKRWSIPLPNWVSLY 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ I V+ F ++ L L + + + ++ G+ R S I
Sbjct: 184 VQIAFGVIVLIPNFLLTDNVQLNGENLPLVVFAGIMASIIAPFLWIQGVMRLGASKAAIF 243
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + ++ +L +P+ + GI ++ +++
Sbjct: 244 MNLTPIFTAMIAIGLLHEPLHHYHLVGGGITLLGVIL 280
>gi|237739257|ref|ZP_04569738.1| integral membrane protein [Fusobacterium sp. 2_1_31]
gi|229422865|gb|EEO37912.1| integral membrane protein [Fusobacterium sp. 2_1_31]
Length = 288
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/293 (8%), Positives = 83/293 (28%), Gaps = 11/293 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ A I+W ++ L + + V + + R L + I
Sbjct: 2 KNNSKAYFLIIAAVIIWSLSGLLVKAV-NVDPIWISLIRCLGGGIFLLPYIF-------- 52
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
P + + + + + ++ VI
Sbjct: 53 --KEKIYPIKNILFGGIFMAIFLLSLTITTRISSSAMAISMQYTAPMYVIGYGFYKSKEI 110
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + + I+ I +++ G ++ A+ F + +
Sbjct: 111 KFEKFIVFLFIFAGIIFNSITSMNGGNWWAIVSGITIGLAFVFYSYNLQKVKKGNLLGIV 170
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ I + + + I +++ + ++ G++ +
Sbjct: 171 ALINIISAIFYGILLLFRYSPPPSSFNEIIILSISGIVISGISYALYGEGLREISMEKAM 230
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
I+ P+L + + I +++++ ++ + ++ N+ K K
Sbjct: 231 IICLAEPVLNPLWVYLGKGEIPSMTTVIGSTLILLSAILDIAFSIKNNKKAKK 283
>gi|228934312|ref|ZP_04097151.1| Transporter, EamA [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228825480|gb|EEM71274.1| Transporter, EamA [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 309
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 89/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFIMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKT 187
+ER + I +++ + + L + A W Y +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S L + + + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMLSWGSLAYSIIFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 300
>gi|227515063|ref|ZP_03945112.1| DMT superfamily drug/metabolite transporter [Lactobacillus
fermentum ATCC 14931]
gi|227086585|gb|EEI21897.1| DMT superfamily drug/metabolite transporter [Lactobacillus
fermentum ATCC 14931]
Length = 305
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 86/291 (29%), Gaps = 10/291 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L C LWG Q + ++ +++ R++++ + +
Sbjct: 6 KGILLAICGASLWGALGAGAQLIFSHTSMTASWLVAVRLIFAGLIMTAIGLV-RNPGQTK 64
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ F+ + ++ A+ T + ++ PV+ + ++ +
Sbjct: 65 GLLTNRGDLGILIAFTFLGMLNSQFTYMKAVQTSNAPTATVIQYLQPVLIIVWFTLRNRA 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------ 195
L I++ + ++ + + LSL + A
Sbjct: 125 WPRRLDILSITIALVGTFFLVTGGHLNSLSLTPIALFWGLMCALAAAIYTVLPQGLLSRY 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ +C L + + + + + +F I
Sbjct: 185 DTLTVCGLGMLIGGICMSPVLVLTPLPNMTAFDWGTLVYIVIFGTILAYTLFLSSINYIS 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ G++ PL+ +V L + + ++++ ++ LP
Sbjct: 245 PAVTGMLSAFEPLVATTLAVAFLGTKLTAASVLGSLLIILCTLIQSLPLKR 295
>gi|58038931|ref|YP_190895.1| hypothetical protein GOX0456 [Gluconobacter oxydans 621H]
gi|58001345|gb|AAW60239.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H]
Length = 310
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 86/287 (29%), Gaps = 7/287 (2%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L Y + I+ ++ + EV S F ++ F
Sbjct: 9 GILLALLGYAAFSISDACSKGLAGHLDPFEVAF-----SGGVFGFILLPFIRRPDEPYSD 63
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ GM + A V + A + F+ P + LKE+++
Sbjct: 64 IFATTRPGMWILRAVSTFVSTAASVMAFMLLPMPEALSLMFLMPFFVTIISVTILKEKVS 123
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG-SSEGFFIEMCVL 203
++ + L +LI+ + +A A + + +G
Sbjct: 124 FWTWLSVAVGFLGVLIVLRPGARTFHLGHVCAIVAALANASSVVAYRLAGDGSARLSLFG 183
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + + + L GYG L + A + V + +
Sbjct: 184 SSLFGPLIGDGLLMITHASWPHGLKVWAILFGYGFLAALGQLFMMMATAVAPANRVALPQ 243
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y+ + + S + QP+D + +V ++ ++ + + +
Sbjct: 244 YSQMVWAVAFSYLLFNQPLDNWTFVGIVVVTLSGMLNWIRQKLRFER 290
>gi|194439588|ref|ZP_03071661.1| carboxylate/amino acid/amine transporter [Escherichia coli 101-1]
gi|300920179|ref|ZP_07136628.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
115-1]
gi|194421497|gb|EDX37511.1| carboxylate/amino acid/amine transporter [Escherichia coli 101-1]
gi|300412801|gb|EFJ96111.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
115-1]
gi|332343684|gb|AEE57018.1| carboxylate/amino acid/amine transporter protein YedA [Escherichia
coli UMNK88]
Length = 306
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 85/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGIILLAFLLLRGHKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ L +L+ + + + F S G
Sbjct: 63 PPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL-CFSRLFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + + + + Y I+ +
Sbjct: 182 AIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + + + G++V A+V+ L + K
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAK 293
>gi|327191977|gb|EGE58958.1| putative transporter, permease protein [Rhizobium etli CNPAF512]
Length = 303
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 86/279 (30%), Gaps = 16/279 (5%)
Query: 27 TLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A +WG T + T L L V + A+ L +++
Sbjct: 11 VLITAVAPAIWGSTYFVTTSLLPHGYPLTVA----------MLRALPAGLLLLLIVRKLP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ A + W + G + + V P+I + L +FL + +
Sbjct: 61 TGVWWGRAFILGALNFSFFWAMLFVSAYRLPGGVAATVGAVQPLIVIALSRLFLGKPIRF 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-----SAYCFARKTIPVGSSEGFFIEM 200
L ++A L+ + + ++ L L + +A A+
Sbjct: 121 LAVVAGLIGMSGVALLVLTPNAALDPVGVAAGLGGAVSMAFGTVLSRHWQPPVSSLTFTS 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + V + +F + ++ G+ R + S
Sbjct: 181 WQLTAGGILLVPVALLLEPALPMPTTENILGIAYLGLIGAAFTYLLWFRGLSRIEPSAAA 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + +P++ + L Q + + F +V+ ++ +
Sbjct: 241 SLGFLSPVVATLLGWLALGQSLTPAQIAGFAMVLASVWL 279
>gi|291482631|dbj|BAI83706.1| hypothetical protein BSNT_00451 [Bacillus subtilis subsp. natto
BEST195]
Length = 312
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/310 (10%), Positives = 79/310 (25%), Gaps = 18/310 (5%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYF 74
++ GT+F+ + + ++ ++ Q+ V+ +R L ++P + + +
Sbjct: 6 QSKIREAAAGTIFLLIGTVCFASKSIWIKWAYQMGAEPDAVLLYRQLLAVPLFWLIFLIY 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ K K + L + P+
Sbjct: 66 RPPMPDGK---KKGDLWKACGAGVFCFFLSPLLDFIGLNHVSAMVERILLMSYPLFVFGF 122
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
++R + + A L ++ L + L + +
Sbjct: 123 TVCRDRKRSSIQDLFAVLAVMFGLFLALGGWNAELFQANMIGAVFILLSSAVYAGYLVLS 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGG-------------EHFFLGNIPDTLFLIGYGLLNS 241
G + + + G + LF + +
Sbjct: 183 GHLVHQIGGIRLNAYGMTAAGAAMMLYTGIKSAAGMNTPMVAYPLSMYGLFAVIAVVTTV 242
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
F + GI+R + P+L I L + + ++ I V +
Sbjct: 243 IPFVLMLEGIRRIGAQRAAAISMAGPVLTIFYGALFLGERLRLIQVIGCTAVFFVITGME 302
Query: 302 LPTVINSGKN 311
+ K
Sbjct: 303 YRKLKTGKKE 312
>gi|229096180|ref|ZP_04227153.1| Transporter, EamA [Bacillus cereus Rock3-29]
gi|229115135|ref|ZP_04244545.1| Transporter, EamA [Bacillus cereus Rock1-3]
gi|228668275|gb|EEL23707.1| Transporter, EamA [Bacillus cereus Rock1-3]
gi|228687140|gb|EEL41045.1| Transporter, EamA [Bacillus cereus Rock3-29]
Length = 303
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 91/299 (30%), Gaps = 15/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +WG T + Q + V R L++ + F + FS S
Sbjct: 4 KKEWLAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGLRFLFAGIILLFVQMIFSQKTS 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ + L V + + LL F ++ V+ L +FL
Sbjct: 64 KQDI----KQSSFAGLIVGFFLCVGYLLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT----------IP 189
K++ ++ + L ++T L I V A FA P
Sbjct: 120 KQKATIFVVLGITVATAGLYLLTAADSFQLNIGDILVLGCAIAFAAHILINGFFSKKISP 179
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + + + + F + + + S F I +
Sbjct: 180 LLLSTSQVLAVGIFSSICAFLFEDWEKLFSVSLWTNHSFLFALFLTSLFATSIAFFIQTS 239
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + V I+ P+ ++ V + + + + + M+ LP+ I
Sbjct: 240 AQKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSMSAIFGCLCIFLGMIFVELPSKIKK 298
>gi|225619203|ref|YP_002720429.1| hypothetical protein BHWA1_00256 [Brachyspira hyodysenteriae WA1]
gi|225214022|gb|ACN82756.1| putative transmembrane protein [Brachyspira hyodysenteriae WA1]
Length = 308
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 95/284 (33%), Gaps = 16/284 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
EN G +F A I+W + +FL ++ +E+ +R L +L + +
Sbjct: 2 SENNKTNNNTGYIFAILAVIIWSGNFVAARFLVNLTPIEISFYRWLVTLLVLTPFCI--- 58
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + +++ S + + F A T S ++P++ +
Sbjct: 59 -KKLLDTIKYIKGIWIQVIILSILSVTLFNTFVYMAAHTSNATNMSLLATLSPIVIALIS 117
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCF 183
+ LK +L Q I L +I+ ++I+ G + +A+ +
Sbjct: 118 RIVLKTKLTIYQKIGLLAVIVGVVILITKGSIEILMKLQFAIGDFYMLIAVIIFSIYTLI 177
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
R FF M ++ L + + L + L ++
Sbjct: 178 LRIKPKEMPHHIFFYLMVIIGFIPLMAAMIYLYISNNAHTLNMQTGLILLYVGVFPSALG 237
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
F ++ I R I+ + P + +V +L + + +
Sbjct: 238 FIFWNIAIARIGAIKGAIIYDSVPFFSSLEAVILLNEKLLLSQV 281
>gi|254473936|ref|ZP_05087330.1| Integral membrane protein DUF6 [Pseudovibrio sp. JE062]
gi|211957046|gb|EEA92252.1| Integral membrane protein DUF6 [Pseudovibrio sp. JE062]
Length = 304
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 81/272 (29%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+W + + + + + ++ R+L +F A+ LS + G
Sbjct: 16 AAMWSSSYVVIKIGVASLEPAFLVFGRMLVGSLIIFSALKIRGLSLSKDPVDWVSYAVTG 75
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFL-----TSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L + L + +G + + V L L L
Sbjct: 76 LLGSALPFLLISYGEQSVDSALTSILMGTSPMVTLLLAAWLVPEEALTLRTTLGVLGGLT 135
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A L+ +L + + LA +++ + ++
Sbjct: 136 GVAILVGPGALSGLGVQVTGQFAILAATASYATSTVYIRKYVKRPPLEMAAGSMIVGTVT 195
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + L + + + I+ Y + + + + + + P
Sbjct: 196 IGIYAVATGTDFSAIELTGSSLGAVVYLGVISTACANLIYFYLVPKIGANRMSQVNFAVP 255
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + SV +L + + R I +++ ++ +
Sbjct: 256 VGGAILSVILLGEVMTPQRFIALLVIIGSVYL 287
>gi|332283780|ref|YP_004415691.1| hypothetical protein PT7_0527 [Pusillimonas sp. T7-7]
gi|330427733|gb|AEC19067.1| hypothetical protein PT7_0527 [Pusillimonas sp. T7-7]
Length = 292
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 89/292 (30%), Gaps = 12/292 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVY-FSGGLSLL 81
MG L +L+ + + V L +I R++ SLP +
Sbjct: 1 MGFLLAGMGAVLFSAKAIVVKLTYRYGVDALTIIGFRMMLSLPFFAVVAFFQARRARRGK 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L + ++ + L L F++P + + ++ LK
Sbjct: 61 LPILTVKERFQLVFLGFIGYYLSSYLDFLGLQYITAGLERLILFLSPTFVLLISAIALKR 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTIPVGS 192
++ Q +A L L ++ + L + + A +++ Y +
Sbjct: 121 PISTGQWVALGLSYLGVVFVFLQDLSFSGNDVMLGALFVLGAAFSYAFYLIGSGELIKRV 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + V + G G + L +I + + + +
Sbjct: 181 GATRLVAYAMSVSAIVSMVHFFGVHGLSGLYQARQVYELSMIHAVVNTVVPTFMIMWSVA 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
R + P+ ++ + ++L +P+ ++ + + VV
Sbjct: 241 RIGAPMTAQLGLLGPVSVLFLAAWLLGEPLTAMQLLGTAFTLAGAVVLSRRR 292
>gi|323705925|ref|ZP_08117496.1| protein of unknown function DUF6 transmembrane
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534723|gb|EGB24503.1| protein of unknown function DUF6 transmembrane
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 288
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 90/287 (31%), Gaps = 13/287 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++WG T + + + V + R +L + +
Sbjct: 9 IMLLLVTVIWGSTFVVVKNATSILPVYNFLFLRFSIALIILVIMF--------GKRLLHI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +L + + F L + F V+ L + FLK +L+
Sbjct: 61 DKNTFAVSIIVGIMLFLGYAFQTLGLKYTTASKSGFITGFNVVLVPILEAFFLKAKLSKT 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++ LL + L +MT + + + + A+ S + +
Sbjct: 121 SWLSVLLALGGLFLMTANIDLKINFGDFLTLLCAVSFAFQVVLIAKYAPSVDTISFAIIQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + L + + ++ +F + + + I+
Sbjct: 181 IFVVTLLSGILSFVYEKPTIPTDKTVWFALILTGIFATAFALAVQNTMQANTSATHAAII 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ +++ + + + I +++ +M++ +P+ N
Sbjct: 241 FSLEPVFSAITAYLVSGEIMTLRSIIGGFLMITSMILSEMPSKDNLR 287
>gi|303245529|ref|ZP_07331813.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
gi|302493378|gb|EFL53240.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
fructosovorans JJ]
Length = 300
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/274 (13%), Positives = 87/274 (31%), Gaps = 15/274 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L + +LWG + + + + + L V+ R+ + +
Sbjct: 7 SWRAALALTAGTLLWGGSFIAMKIAMRGYAPLLVVFCRMALASLVFGLM------WRRMG 60
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
G++ + +++ F AL Q + + P+++V ++FLKE
Sbjct: 61 GFGAAKGDWPGLIFMALCEPCLYFVFEAKALTLTQASQAAMVTAMLPLLTVLAAALFLKE 120
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPL--------LSLAIAVTWSAYCFARKTIPVGSS 193
+L LL ++ +++M+ G L A + + +
Sbjct: 121 KLEKKAAFGLLLAVVGVVVMSASGGATGDAPRPVLGNFLEFIAMCCAVGYIVTARRLAAR 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ A + F + P + + + +++YG+
Sbjct: 181 HRPLYLTAMQAFTGTVFFTPVLFFVPFPERIEPGPTLAVVFLGLGVTFVAYGLYNYGVSL 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
A S P+ + S F+L + + +
Sbjct: 241 APASKAAAFLNLIPVFACLLSYFMLDEKLTPTQW 274
>gi|256826778|ref|YP_003150737.1| putative permease, DMT superfamily [Cryptobacterium curtum DSM
15641]
gi|256582921|gb|ACU94055.1| predicted permease, DMT superfamily [Cryptobacterium curtum DSM
15641]
Length = 309
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 79/280 (28%), Gaps = 5/280 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ V ++G+ + + +S + R + L V F + + +S K
Sbjct: 9 IMLVLIQAAIYGLGNVLMKIAYLGISPMWCAVLR--FGLAFVLFMLFFGRRVISTFKGKR 66
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQ--GFLTSFSYFVTPVISVFLGSVFLKERL 143
L+ +A+ L + + L V ++ + L
Sbjct: 67 LRTWLPSCLLMAASFLLCGLAVNLTSATNAGFFMALPMLFTPVLSLVVLRRAYTLQTVLL 126
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ I L+ + ++ G + A ++ A + + + +
Sbjct: 127 QGVVIAGLYLLCCNGGALSFGPGEFCGLASSACFAASIVMAEHGLGEVDAIAMSVAQIGV 186
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + F + ++ + R +TV ++
Sbjct: 187 TFVTATGAAIVFEVPPVLDAVPLESWVAIAFLAVIGTCVAFFLQNFALSRIPSATVSVLL 246
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ S L + + +V + ++V + L
Sbjct: 247 CAEPVFTAAISAVALGEVLTSVGIVGAALIVACTMAASLE 286
>gi|269128427|ref|YP_003301797.1| hypothetical protein Tcur_4232 [Thermomonospora curvata DSM 43183]
gi|268313385|gb|ACY99759.1| protein of unknown function DUF6 transmembrane [Thermomonospora
curvata DSM 43183]
Length = 333
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/282 (10%), Positives = 90/282 (31%), Gaps = 13/282 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ + +G L + +G++ ++ + + V +++ R + ++ + +
Sbjct: 1 MPSPRSRSSLGALLCLISAAGFGLSAIFAKETYRTGAGVQTMLTVRFAVAAALLWLLVAW 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + + + A A + +L G L + + P +
Sbjct: 61 RRPALPTGRA------LLTCIGLGAIGYACQAMCYFGSLARIDGSLAALLLYTYPPMVTA 114
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS- 192
+ +E ++ ++ A + +L++ P + + + +A + V +
Sbjct: 115 IAIALRREPVDRRRLTALACSVPGVLLLLGGGVRPGAASGVLLALAAAGTYAIYLTVAAG 174
Query: 193 ----SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + V A+ V+ +G + +
Sbjct: 175 LPEELDLITVSAVVCTSAAVSMVLITAGTGSWQPPAQASGWAWTTMLAIFSSVVPIVCML 234
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
G++ ST I+ Y P + + S+ + + + + +
Sbjct: 235 AGMRMVGASTAAILSYAEPAVAVASTALVYGERLSAAQLLGG 276
>gi|331680065|ref|ZP_08380727.1| hypothetical transport protein YijE [Escherichia coli H591]
gi|331072391|gb|EGI43724.1| hypothetical transport protein YijE [Escherichia coli H591]
Length = 312
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 203 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 300
>gi|83593342|ref|YP_427094.1| hypothetical protein Rru_A2007 [Rhodospirillum rubrum ATCC 11170]
gi|83576256|gb|ABC22807.1| Protein of unknown function DUF6, transmembrane [Rhodospirillum
rubrum ATCC 11170]
Length = 345
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 80/301 (26%), Gaps = 22/301 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSV-LEVISHRVLWSLPGVFFAIVYFSGGLS 79
T G +V A +++ + + L++++ R +L + + GG+S
Sbjct: 34 HDTARGVAWVLVACVIFTLVYASGRLAGGGVGGLQIMAIRYASALVCIVGFALARRGGVS 93
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ A + + I + S + V SV LG V L
Sbjct: 94 ACRSP-----RPFRHFSRAMMGGLGGACLIQGVTLLPMAEASAIGLLDGVFSVILGIVLL 148
Query: 140 KERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFARKT 187
ER+ L+ + L ++ +++ +G + + A
Sbjct: 149 GERVRPLRWLGVALSLVGGVLVIAGRADLSGLLDHLLAGGAVFYPLAGAAFVAMERVLMR 208
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I V L + + F
Sbjct: 209 QLALREGKMAILFHVNLFGTLILMPVALMTWVPLEGPTLALLIAFGPLA----LLGQFCN 264
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
G A++S G + Y+ + + + + ++ + V
Sbjct: 265 IRGFALAEVSITGPVWYSWLIFAAALGWVMFDEVPGPGVILGGAVIALGGVFLCASGRKR 324
Query: 308 S 308
+
Sbjct: 325 T 325
>gi|310826654|ref|YP_003959011.1| transporter [Eubacterium limosum KIST612]
gi|308738388|gb|ADO36048.1| transporter [Eubacterium limosum KIST612]
Length = 324
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/309 (13%), Positives = 96/309 (31%), Gaps = 18/309 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L + + G ++ + + + + E F+ I +LK
Sbjct: 12 GVLLAASSAVATGTFGVFLNYFDSLGISENAMSTFTPLAVLSFYLIYTLVTHPKVLKLPR 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K ++ ++ I + T + S F ++ VFL +F K ++
Sbjct: 72 KLFYFTLIVCSGMIASPIYIYTSIRSFNTLPIAVASLLDFSNAIVLVFLMRIFFKSKITK 131
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++IA ++ + ++++ G + + + + F I V +
Sbjct: 132 EKVIACVIAVFGMVLVLNLFGTHVSDITTIGIFWGLANCFSLAFAYLFDYFHISNGVSYL 191
Query: 206 PALFYVVWNGFSGGEHFFLG--------------NIPDTLFLIGYGLLNSFVFCIFSYGI 251
L Y G + L L GY + + +
Sbjct: 192 AYLVYSNAMGLIVFSFKTTPAEVFREFAAAAPSGGLTMWLMLFGYFAVLVISYGTIAVSY 251
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI----N 307
+ ST + P + +L Q + +++ + I V A+V
Sbjct: 252 NYIEASTASLTFVLEPTTAALLGFLVLSQHLGSLQIVGMVIAVCAIVYMQYTGDKADEAQ 311
Query: 308 SGKNKTKKS 316
+ +N+ KK+
Sbjct: 312 AKRNEKKKA 320
>gi|290508989|ref|ZP_06548360.1| UAA transporter [Klebsiella sp. 1_1_55]
gi|289778383|gb|EFD86380.1| UAA transporter [Klebsiella sp. 1_1_55]
Length = 298
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 87/278 (31%), Gaps = 3/278 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A I+ G + L + V++V+ R L + IV S
Sbjct: 1 MQLTRGVWQMSLAMIISGSIGAFV-LLSGLPVMDVVFWRCLIGALTLLVFIVLSGQPFSR 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L +G L + + ++ + + + + V V
Sbjct: 60 LTRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGERVSAV 119
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ L ++I+LS + + H + +A+ + + I
Sbjct: 120 KWGWLLLAFGGVVILLSSELTSAHGEGLTTGVLLALGAAFFYALTAIIARKLHP--LPAQ 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ I L VV + + P LI + ++ + I++ G
Sbjct: 178 HIAFIQVLVGVVMLLPLVHAPEWTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPITG 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + PL+ +V + + V+ I +++ A
Sbjct: 238 SLSFIYPLVAMVVDYLVFHHALTPVQLIGGMLILFAAA 275
>gi|229110503|ref|ZP_04240073.1| Transporter, EamA [Bacillus cereus Rock1-15]
gi|228672987|gb|EEL28261.1| Transporter, EamA [Bacillus cereus Rock1-15]
Length = 298
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 90/292 (30%), Gaps = 17/292 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ ++WG ++ + +S ++ S R L + P + L + K
Sbjct: 3 WLLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFMMERSLRIEKKDWL 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ A++ F+ ++ S ++P+ + L + +ER +
Sbjct: 63 R-----LVAVGIVGTAMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMK 117
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIPVGSSEGF 196
I +++ + + L + A + +
Sbjct: 118 VQIGSIVAFIGAAFVLLTGHTGGTTYEYAWLGNIIGLVAAIAWGWYPILAQPLITKYSAM 177
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ I + VV+ F+ + F ++ GI +
Sbjct: 178 RVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMWYVGISQIG 237
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 238 STKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 289
>gi|229139674|ref|ZP_04268244.1| Transporter, EamA [Bacillus cereus BDRD-ST26]
gi|228643805|gb|EEL00067.1| Transporter, EamA [Bacillus cereus BDRD-ST26]
Length = 309
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/300 (10%), Positives = 89/300 (29%), Gaps = 17/300 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 6 RMKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFMMERSL 65
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 66 RIERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLH 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKT 187
+ER + I +++ + + L + A W Y +
Sbjct: 121 KQERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQP 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ S L + + + + F ++
Sbjct: 181 LITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMLSWGSLAYSIVFATIFGLAMW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 241 YVGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 300
>gi|254508284|ref|ZP_05120407.1| transporter, drug/metabolite exporter family [Vibrio
parahaemolyticus 16]
gi|219548801|gb|EED25803.1| transporter, drug/metabolite exporter family [Vibrio
parahaemolyticus 16]
Length = 343
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/298 (9%), Positives = 86/298 (28%), Gaps = 11/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ A +LW + L + + +++++ + S +
Sbjct: 37 MNERRALGLGLSAVLLWSTVATAFKLTLAEFTPIQMLTVASIVSALALMIICAATGKLKQ 96
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + L NP +L ++ A + + + +VFL
Sbjct: 97 LPRTFLSNPWYYLLL--GVINPLAYYIILFKAYDLLPASQAQAINYSWAITLTLMAAVFL 154
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+++ +A L ++++ L+ PL ++ +
Sbjct: 155 GQKIRKQDWVACTFSYLGVIVIATKGDVLGLNFDSPLGVGLALLSTLLWAGYWILNAKNK 214
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + G + N F ++ +K
Sbjct: 215 ADPVVGVLLGFLVAIPFAIGLTLYEGASFSHITNKGWLAVTYVGLFEMGVTFVLWLSALK 274
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + + +P + ++ I+ + I +++ +V+ +
Sbjct: 275 ATQNTARISNLIFASPFISLMLLASIIGEEIHPATLFGLVLIITGLVIQQIKIGKKDR 332
>gi|20090520|ref|NP_616595.1| integral membrane protein [Methanosarcina acetivorans C2A]
gi|19915546|gb|AAM05075.1| integral membrane protein [Methanosarcina acetivorans C2A]
Length = 346
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 92/295 (31%), Gaps = 19/295 (6%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A + V I++G ++ ++ +SV V+ R+ + L +FF ++
Sbjct: 43 PAQKNSFKPYSEVITGSIIYGTMGVFLDRVQDMSVGSVLFCRLFFGLCMIFFYLLLSGSL 102
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + + AV ++ A+ + + PV L
Sbjct: 103 EQLRPGKNRKYLLL-----LGFLNAVTGVCYLSAIRYSGISVAVLLLYTAPVYVNLLAPS 157
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS-----------AYCFARK 186
L E+ + ++ L + +L++ + A
Sbjct: 158 ILGEKSSSKSLLPLFLSLAGVLLIARPGEVLGSLNEGADFMKGLSFGLISGLSFGATIIT 217
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ + L +L +++ + + + ++GN + ++
Sbjct: 218 IRYLRHDYTGISQTFWLTGISLLFMLPSALTTPMYTYIGNFSTLFLFGLTITFAAILYLK 277
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
GI+ T I+ P+ I +LK P+ + +++ A +
Sbjct: 278 GISGIR---AQTGSILALLEPVSGIFFDTAVLKNPLYISTFLGCVLILTAAYLVS 329
>gi|15612959|ref|NP_241262.1| hypothetical protein BH0396 [Bacillus halodurans C-125]
gi|10173009|dbj|BAB04115.1| BH0396 [Bacillus halodurans C-125]
Length = 305
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/283 (7%), Positives = 73/283 (25%), Gaps = 8/283 (2%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + ++WG + ++ L V V + R + ++
Sbjct: 4 YVMLLSLSLIWGFSFVFIEHLLGIVGVWGTVVVRCFAGAIILLPILLMRRKLFYRPAPWK 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
L IY+ + + ++ ++ ++
Sbjct: 64 ALMIVGIFNAGLPWGLIALSQTEIYSSTAAVLNALTPLFTGLIGFLLYSNALSRQQWGGI 123
Query: 146 LQIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + ++++ + L + L ++ V F +
Sbjct: 124 VLGFSGVVVLTGFQLQLLAPEHFVGVGTMILATICYGFASQYVKRHLHDTDVVLITTFSL 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L ++ + + + + L + ++ +K+
Sbjct: 184 LFGGLVGLIGMWITDSLHVVRVPLTIDWLSLISIIGLGCLGSGMAHLLYYDLMKKGGPEF 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ Y P+ I+ L + I I ++++ +
Sbjct: 244 ATTVTYLIPMTAIIWGKLFLDELITKNIVIGMLMILMGVYFTS 286
>gi|330821237|ref|YP_004350099.1| hypothetical protein bgla_2g21530 [Burkholderia gladioli BSR3]
gi|327373232|gb|AEA64587.1| hypothetical protein bgla_2g21530 [Burkholderia gladioli BSR3]
Length = 305
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/289 (8%), Positives = 75/289 (25%), Gaps = 6/289 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A ++WG + + L + R L + ++ + +
Sbjct: 13 LLMLAAAVIWGSAFVAQRLSLSVIGPFLYTGLRFLLGALVLVPLLLTRQCARREIAALAQ 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P + + +LA L + F + V+ +G +
Sbjct: 73 RPAGLLPGLLLGLLLAASISLQQIGLQYTRIANAGFISSLYVVLVPLIGMLLRHRA-GTG 131
Query: 147 QIIAALLIILSLLIMTLHSGIPLLS----LAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ A L + L +++ ++ + + + +
Sbjct: 132 TWLGATLAAIGLYFLSVDEHFSVMYGDGFQLVGAILISIHVIAVGYFARRHDPLVLAFQQ 191
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L L G L + + + A + ++
Sbjct: 192 FLVCGLLCGAIGLGVETLDANTLARALPTLLYGGLLSVGVAYTLQVVAQRDAAPAHAAVI 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ L + + + +++ ++V L + +
Sbjct: 252 FSMEGVFAALAGWAALGETLSLRALLGCALMLAGLLVCQLLPNRAAARE 300
>gi|313672208|ref|YP_004050319.1| hypothetical protein Calni_0243 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938964|gb|ADR18156.1| protein of unknown function DUF6 transmembrane [Calditerrivibrio
nitroreducens DSM 19672]
Length = 289
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 94/289 (32%), Gaps = 10/289 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQF--LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + +G ++ ++ + ++S E++++R + + L +
Sbjct: 4 GIFYALLSATFFGFLGIFGKYGTILKISATELLTYRFIIGSLFFILFFLLKDRKLFRIDL 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ V + FF AL TS ++ P++ L +F ++
Sbjct: 64 ----KNFIRACVAGGIFYLLMSYFFFKALEYIPASTTSLILYIYPLMVSILSILFFGIKI 119
Query: 144 NHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ I+ +LI +++ + + L + A +
Sbjct: 120 SRSLFISLILIASGCILIFYDAFNRSLDLRGVLFAFLAMLVFSFYLIYVQKTISNVKPIT 179
Query: 201 CVLAIPALFYVVWNGFSGGE-HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + + F+ F L N L ++ + + I++
Sbjct: 180 FSFYVILTAGLSFTLFNNPIGIFNLNNKQIVLVILIGIIPTFLAVMLQFIAIEKIGSVYT 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I P++ + +S F L I + + ++++ +V+ L +
Sbjct: 240 SIFSTIEPIVTVSASYFFLDDNIVIQQVMGMFMIILGIVLPNLKILKKR 288
>gi|302391966|ref|YP_003827786.1| hypothetical protein Acear_1201 [Acetohalobium arabaticum DSM 5501]
gi|302204043|gb|ADL12721.1| protein of unknown function DUF6 transmembrane [Acetohalobium
arabaticum DSM 5501]
Length = 296
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 85/292 (29%), Gaps = 11/292 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + + + L V +R+ + +F ++ + G +
Sbjct: 9 YLILILGVFIISFAAILIK-LTTAPAPVVAFYRMALASIILFPIVIVRNRG---EIKEVL 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK------ 140
K + LA H+ F+I +L + + P+ + K
Sbjct: 65 TRKYFISIFCGGFFLAAHFIFWITSLNYTTVASSVVFVAMQPIFVTLGSYLIFKEEASAS 124
Query: 141 -ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ ++ +++I S L + + L A +
Sbjct: 125 LIVGIVVAVVGSVIIGFSDLKVAGNFLYGDLLALAGAVMIAGYVLIASKLREELSLLPYV 184
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +I ALF ++ G + +F + N F++ +K V
Sbjct: 185 FVIYSISALFLYIFVLGQGYKLVSYSLNDYFIFFLLALGPNLIGHTSFNWALKYVSSPVV 244
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ + + FIL + I ++ + + + KN
Sbjct: 245 ATSILVEPIGSTILAFFILNEVPPIGTLIGSIFILSGIYLAVREDSKGKEKN 296
>gi|262192220|ref|ZP_06050378.1| permease [Vibrio cholerae CT 5369-93]
gi|262031893|gb|EEY50473.1| permease [Vibrio cholerae CT 5369-93]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 83/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIISALALLVICAAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACALSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWYENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|169828044|ref|YP_001698202.1| putative transport protein [Lysinibacillus sphaericus C3-41]
gi|168992532|gb|ACA40072.1| Hypothetical transport protein [Lysinibacillus sphaericus C3-41]
Length = 290
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 90/292 (30%), Gaps = 15/292 (5%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGGLSLL 81
++G LF+ A +WG + + + +V + R L ++ + + +
Sbjct: 4 KIIGALFLSLAASIWGAMYVVVKVVVEVVPPLELVWIRYLIAVLALGLIGIMMKQSWKIA 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K VG++ + + + + TP V + LKE
Sbjct: 64 KKDRLLIILVGLIGN-----TISIVTQEMGTMLSTAQMGAIITATTPAFMVVFARIILKE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSL---------AIAVTWSAYCFARKTIPVGS 192
+ + ++ +L + + + H GI L A+ + +
Sbjct: 119 NITPKKGLSIILATIGVGAIVGHGGINLTQQLGGLYLLVAALTWALMSVLVKKVPSHYSQ 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I +V+ L L + + F +++ G++
Sbjct: 179 IVVTTYSSLIAVILLTPFVIPRLKDLNLSVVLQPTISGGLLYLGIVSTAGGFLLWNKGLQ 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S+ G+ + P++ + +L + I + + + + +
Sbjct: 239 LMNASSGGLFFFLQPVVGTILGWLLLGEAIGLSFWLGSLFIFSGVFMVIREE 290
>gi|24115237|ref|NP_709747.1| hypothetical protein SF4021 [Shigella flexneri 2a str. 301]
gi|110807803|ref|YP_691323.1| hypothetical protein SFV_4013 [Shigella flexneri 5 str. 8401]
gi|331675438|ref|ZP_08376188.1| hypothetical transport protein YijE [Escherichia coli TA280]
gi|24054525|gb|AAN45454.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110617351|gb|ABF06018.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281603337|gb|ADA76321.1| hypothetical protein SFxv_4383 [Shigella flexneri 2002017]
gi|331067498|gb|EGI38903.1| hypothetical transport protein YijE [Escherichia coli TA280]
Length = 312
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 203 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 300
>gi|332291941|ref|YP_004430550.1| protein of unknown function DUF6 transmembrane [Krokinobacter
diaphorus 4H-3-7-5]
gi|332170027|gb|AEE19282.1| protein of unknown function DUF6 transmembrane [Krokinobacter
diaphorus 4H-3-7-5]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 100/295 (33%), Gaps = 20/295 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L F A ++GI + L + I RVL + + ++F
Sbjct: 2 SKRHLAFLAAFGASFIYGINHTLAKDLMPTNIQAYGFIMLRVLGAAVLFWITSLFFPSEK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
KD + ML+ + + ++ F L +S ++PVI + L ++F
Sbjct: 62 IERKDWWR------MLLCALFGMTINMLMFFKGLQLSTPINSSVVITLSPVILLVLSAIF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARK 186
LKE++ L+ + ++ L++ L G L + +
Sbjct: 116 LKEKITWLKGSGIAIGLVGALVLILFGAKTQENAPNITLGNMLFMINATAYSVYLILVKP 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
SS ++A+ + F L + +
Sbjct: 176 LTAKYSSITLMKWFFLIAVFTNAPIGLPQFLEVSWSTLPPNVIGVMAFVVVGTTYLTYLF 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +K+ K ST+G Y PL+ + ++ + + T+R + ++ + + +
Sbjct: 236 NVFALKQLKPSTIGAFIYLQPLIATIVAIILGADTLTTIRIVAAALIFLGVYLST 290
>gi|313144494|ref|ZP_07806687.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129525|gb|EFR47142.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 82/280 (29%), Gaps = 14/280 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L A + + L +S + + +R+ +LP + + +
Sbjct: 19 ILLALLAESFIIYASVLVK-LTDMSPINLGFYRIALALPIFWLMANTRRNVFKIPLKDIA 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ + A FF AL + + I + +G F KER
Sbjct: 78 ------FMMLAGIFFAFDLLFFNLALRHTSVANVNLFASLACFILMPIGIFFFKERFKKS 131
Query: 147 QIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ A++ + + I+ G ++V + A I
Sbjct: 132 LLVGAIVALFGIFILVGGKGELSVATPFGDFMAFLSVLCYSCFLAVIYSLRKRYGTLEIM 191
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L + G + + F+Y + + T
Sbjct: 192 FFACIGSSLMLLALALVFEGFEVPKDMKDFGIIALIALCGQVIGQGFFNYILGKVNTQTS 251
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ +P++ + FIL + + + +++ + V
Sbjct: 252 SLLLLFSPIIAALMGFFILGEKLGIFEILGILVIIFGVFV 291
>gi|306845924|ref|ZP_07478491.1| protein of unknown function DUF6 transmembrane [Brucella sp. BO1]
gi|306273559|gb|EFM55404.1| protein of unknown function DUF6 transmembrane [Brucella sp. BO1]
Length = 309
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 93/299 (31%), Gaps = 19/299 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G F+ + ++ + ++L + V R +FF I+ G +
Sbjct: 12 HVKGMGFMVLSVLMLPLMDAIGKWLAMMDDLPPATVTFMRFFVQCWLMFFIILVAGGLRA 71
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L L + ++ F A+ +F P+I ++FL
Sbjct: 72 LATSHL------MGNLVRGALMGFGGLCFFTAVKYMPLADAMAVFFAEPLILTLFSALFL 125
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE++ + A + ++ +I+ S +++ +A FA I
Sbjct: 126 KEKVGWRRFSAVGIGLIGTMIVIQPSFEIFGMVSLLPLATAVTFAIYLILDRKYGAKESP 185
Query: 200 MCVLAIPALFYVVWNGFSG----------GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L ++ G + +I L L+ G + + I
Sbjct: 186 LTMQFYAGLGGWLFVGVAMLLAADRSFDDMHFALPHSIQPWLLLLLLGTIGTVSHLIVVQ 245
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K A S + +Y + ++ + I + + I++ + +
Sbjct: 246 AFKLAPASMLAPFQYLEIVNAVLVGLIIFGDFPTPSKWLGIAIIIGSGFYVFMRESKKK 304
>gi|296536539|ref|ZP_06898626.1| DME family transporter [Roseomonas cervicalis ATCC 49957]
gi|296263135|gb|EFH09673.1| DME family transporter [Roseomonas cervicalis ATCC 49957]
Length = 299
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 81/256 (31%)
Query: 55 VISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLT 114
+ ++ ++ + F + + M + A + A
Sbjct: 33 LSAYEAVFFGALSGVVALPFLKSRGESYLGVFRARNGWMWLVRAAAALTGSLGSVTAFTH 92
Query: 115 RQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI 174
F+ P L +FLKE + + A +L + +LI+ L
Sbjct: 93 LSMAEAFCLLFLMPSFVTLLSVLFLKEPVGWRRWCAVILGFVGVLIVLRPGFRELNIGHA 152
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
A + + + + + + +V G F L+++
Sbjct: 153 GAVVGGLSGAVTVVMMRAYGRSETRLSLYGAGLIGPIVGCGILMLPDFVWPTPVQWLWVL 212
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
GYGLL + + +R S V +Y+ L I ++ ++ + + I++
Sbjct: 213 GYGLLAALANILVMLASQRIPASLVAPAQYSQMLWAIGFGYWVFGDHLEPIMALGVAIII 272
Query: 295 IAMVVYLLPTVINSGK 310
++ V+ L + K
Sbjct: 273 LSGVMTFLREKVRKPK 288
>gi|170769666|ref|ZP_02904119.1| putative transporter [Escherichia albertii TW07627]
gi|170121474|gb|EDS90405.1| putative transporter [Escherichia albertii TW07627]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 94/289 (32%), Gaps = 17/289 (5%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q +A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYLAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + LL++ + S+ A SA R + + +
Sbjct: 132 IAAVGLLLVLQPWQLDFSSMKSAILAILSGVSWGASAIVAKRLYARHPRVDLLSLTAWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALMVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P+ ++ S ++L + TV ++V+A+ + ++ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGTVEGSGIVLIVLALALVSRKRKESTNVKR 300
>gi|307720290|ref|YP_003891430.1| hypothetical protein Saut_0369 [Sulfurimonas autotrophica DSM
16294]
gi|306978383|gb|ADN08418.1| protein of unknown function DUF6 transmembrane [Sulfurimonas
autotrophica DSM 16294]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 97/295 (32%), Gaps = 23/295 (7%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G ++ A + I + + Q +S LEV+ R + + V A++ K
Sbjct: 15 KGVQYMLIASFTFAIMGAFAKLASQNMSSLEVVFFRNIAGVIIVGLAVL--------KKP 66
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L F I V F Y + +P+ + +FL E+L
Sbjct: 67 MQHPGGKPFLLFFRGFIGFVALLAFFYNIAHIPLGDAMTYSKTSPIFTAVFAWLFLHEKL 126
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------------AYCFARKTIP 189
+ +A + + +L +T SG+ + +S + + I
Sbjct: 127 SLKGWLAVFVGFIGILFITQPSGVGFSKYDLLGIFSGVGAALAYTSVRELKAYYDTRAIV 186
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + L + + + F + + +L+ GL +F + +
Sbjct: 187 LSFMITGTLGPIFLFLISPYINFPELDFMLGKFIMPHGIVWFYLLAMGLFATFSQILMTK 246
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
K VG + YT L I+ +F+ V + ++V A ++
Sbjct: 247 AYGETKAGIVGAVSYTNILFSIIVGLFLGDAFPSLVTSFGIVLIVAAGIMVARDK 301
>gi|186473271|ref|YP_001860613.1| hypothetical protein Bphy_4453 [Burkholderia phymatum STM815]
gi|184195603|gb|ACC73567.1| protein of unknown function DUF6 transmembrane [Burkholderia
phymatum STM815]
Length = 296
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 81/290 (27%), Gaps = 20/290 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +F A I G T + ++ + + + R + P + L
Sbjct: 7 GYVFCALAMIGVGSTVVVSKPIAGGLPPFSATALRFAIAFPIFLAMMRVLKVRWPKLDA- 65
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ ++ + + I + P +S + L ER +
Sbjct: 66 ---RDTLLLIAQAGAGSVGYTVCLIGGMRFASAADAGVVAGTLPAVSAVFAMLALGERPS 122
Query: 145 HLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ A L + +++ T+ G L+ A+ +
Sbjct: 123 PALLGAIALATVGVVVCTVRFDERSDAGGGHSLVGNALVFAAIVCEALFILLNRKLRTPV 182
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFL-------GNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + +V + + + F ++
Sbjct: 183 AALPLSAMMSGIGLLVAVFPACLFEQPWRLAADPVFVGAVAGVVYYALVPTVLGFVLWYA 242
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G R + G++ P+ +V +V +L++ + + + V+ + +
Sbjct: 243 GSSRLSGAQAGVVTALVPVSALVLAVCLLQEAVSGAQIVGVACVLAGVFL 292
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 37/133 (27%)
Query: 171 SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
A+A+ G F AI ++ L
Sbjct: 10 FCALAMIGVGSTVVVSKPIAGGLPPFSATALRFAIAFPIFLAMMRVLKVRWPKLDARDTL 69
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
L + G + G++ A + G++ T P + V ++ L +
Sbjct: 70 LLIAQAGAGSVGYTVCLIGGMRFASAADAGVVAGTLPAVSAVFAMLALGERPSPALLGAI 129
Query: 291 GIVVIAMVVYLLP 303
+ + +VV +
Sbjct: 130 ALATVGVVVCTVR 142
>gi|254475293|ref|ZP_05088679.1| Integral membrane protein DUF6 [Ruegeria sp. R11]
gi|214029536|gb|EEB70371.1| Integral membrane protein DUF6 [Ruegeria sp. R11]
Length = 311
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/259 (12%), Positives = 75/259 (28%), Gaps = 8/259 (3%)
Query: 50 VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI 109
+ L++ R L++ + + G+ + + +
Sbjct: 46 LHPLQISFGRFLFAFLAITAVVAIRRPRFVS--------PHWGLHLGRTSFGWLGVTLMF 97
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL 169
++ + F+ PV + L L ER+ + AA + ++ +I+ +
Sbjct: 98 ASVAYIPLADATAITFLNPVFGMLLAIPLLGERVGPWRWAAAAIALVGAMILLRPTPASF 157
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
++ +A + I + G + +L + + +
Sbjct: 158 QPASLLALAAAMVMGLELIFIKRLAGRERPLQILWFNNMLGCGIASVAVLAVWQTPTAAQ 217
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
L GLL + F G+ RA S V Y + V + D +
Sbjct: 218 WGLLAALGLLMACAQGCFINGMARADASFVAPFSYATLIFATVYDLLFFAMAPDWISVSG 277
Query: 290 FGIVVIAMVVYLLPTVINS 308
G+++ +
Sbjct: 278 AGVILAGAALLAWREGRQR 296
>gi|197286077|ref|YP_002151949.1| transport protein [Proteus mirabilis HI4320]
gi|194683564|emb|CAR44434.1| putative transport protein [Proteus mirabilis HI4320]
Length = 318
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 86/293 (29%), Gaps = 7/293 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S + G + V A ILWG T + +S L + + +
Sbjct: 3 SSGQRLGGIVGVLIAAILWGTTGTAATYAPGLSPLAIGAVAMGIGGLLQGIIAATTIIRQ 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L G + + LA + + + ++ +I L ++
Sbjct: 63 RALIIQNWYFSLTGSVAVAVYPLAFYASMHNAGVTVGTVISIGSAPILSALIEYRLDALR 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVG 191
L + + ++L L + S +A A+ +
Sbjct: 123 LTRQWMCGAGVGVTGMVLLCLAESSGSSTTNDHAMVGIFLGLLAGFTYAFYSWSARRLME 182
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
M V ++ F G + + + + + + YG+
Sbjct: 183 VGIASRAAMGVTFGAGGILLMPVLFVTGAPLLMAWNNAAVGIYMALVPMFLGYVCYGYGL 242
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
R S + P++ + ++ ++ + + + G++V + + +P
Sbjct: 243 ARIPASMATTITLLEPIIAALLAILLVGERLPPIGWAGVGLIVACLGIITVPA 295
>gi|86747649|ref|YP_484145.1| hypothetical protein RPB_0523 [Rhodopseudomonas palustris HaA2]
gi|86570677|gb|ABD05234.1| Protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris HaA2]
Length = 305
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 74/289 (25%), Gaps = 17/289 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ WG + + L + + R ++ + L TL
Sbjct: 18 IALMLLCCFSWGFNQIAVKLVLPDIPPFLQAAIRSAGAMIVILIIARARGVKLFQRDGTL 77
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + + + + Y L +V P + FL ERL
Sbjct: 78 KAGLL------AGVLFGLEFVLIYYGLTLTTASRGVVFLYVAPFVVALGAYHFLGERLRA 131
Query: 146 LQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+Q L + + G +L A+ + + + +
Sbjct: 132 MQWAGLALSFAGVAVAIGVPQPNVDAKVLLGDLMLVGGGALWGATTLVVKASPLQRAPAE 191
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V + + L + F ++ +K
Sbjct: 192 KGLAYQVALSVPILLFAALIAGETIEQTPTPLSLALMAYQSIWVVGLTFLLWFGLVKTYS 251
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S + + PL + + IL +P+ +V+ + + P
Sbjct: 252 ASKLSAFTFFTPLFGVAAGYLILHEPLTPAFGFAALLVMAGLYLVNRPG 300
>gi|325929284|ref|ZP_08190415.1| Integral membrane protein DUF6 [Xanthomonas perforans 91-118]
gi|325929329|ref|ZP_08190460.1| Integral membrane protein DUF6 [Xanthomonas perforans 91-118]
gi|325540306|gb|EGD11917.1| Integral membrane protein DUF6 [Xanthomonas perforans 91-118]
gi|325540351|gb|EGD11962.1| Integral membrane protein DUF6 [Xanthomonas perforans 91-118]
Length = 298
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 99/296 (33%), Gaps = 9/296 (3%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + ++ A + + + L L+V R SLP V + +G
Sbjct: 2 PTTRSPLPAIAWMVAAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+++ P G+ + + V G F++ + YFV P++ L
Sbjct: 62 PRAIV------PVRWGLHLLRGVLGMVMIGCFVFGIKRMPLSTAHTLYFVAPLLVAALSV 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L E + + A + ++ ++++ + + V +A +A I V
Sbjct: 116 PLLGEHVGPRRWTAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAATAYAVAAITVSLLTR 175
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
++ LF + G + + G GL + + R +
Sbjct: 176 TDTPQAMVVWFLLFMAIGAGLLAIPGWVPLQAGHAGLIAGMGLAGALGQVALTQAFMRGE 235
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
S + +EYT + +I + + D+ GI+V + + + + +
Sbjct: 236 ASMIAPLEYTGLVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRRERIRQADR 291
>gi|315587124|gb|ADU41505.1| conserved hypothetical protein [Helicobacter pylori 35A]
Length = 298
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 102/302 (33%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPF 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + I+ +++++ S + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGIVGVVLISDPSVENVGPVEIFMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSVLGLVGMFIDIPFLSTGVHIPRKEDILWISLIGVSGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ + +D + +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDKFLDLKSSFGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|294500319|ref|YP_003564019.1| integral membrane protein [Bacillus megaterium QM B1551]
gi|294350256|gb|ADE70585.1| integral membrane protein (DUF6) [Bacillus megaterium QM B1551]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/300 (15%), Positives = 104/300 (34%), Gaps = 15/300 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S + G L ++WG+T ++ L S + + R L + + +
Sbjct: 3 QSSSFINGILLAAL-VLIWGLTWPMSKLALGYSSPILLSGLRSLSAGIILLAVALPRYKQ 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++ K +V + +G L+ + S ++ PV+ + +
Sbjct: 62 LHWKQNWRK------YMVSGLFNSILFYGLQTIGLMFMPAGVFSVIVYLQPVLIGIIAWL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPV 190
++ E +N ++I LL + + +++ S A++W+ K I
Sbjct: 116 WIGESMNAVKIGGLLLGFVGVATISMGELSANASAIGILLAVLTALSWAIGTVYIKRISD 175
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ I + L + + G H + L L + + I+ Y
Sbjct: 176 SVDGIWLIAVQSLVGGVVMTAAGSKVEGWSHMMWNSSSMLLLLFLALFSVAVAWLIYFYL 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I + + S V + P++ IV L +P + + +++I++ + K
Sbjct: 236 ISKGEASKVASFNFLVPIISIVIGTLFLDEPFTSSLLVGLVLIIISIYLVNKKAKNQKLK 295
>gi|317151951|ref|YP_004119999.1| hypothetical protein Daes_0226 [Desulfovibrio aespoeensis Aspo-2]
gi|316942202|gb|ADU61253.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
aespoeensis Aspo-2]
Length = 302
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 86/281 (30%), Gaps = 15/281 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G + L+ I L + + + LE++ R L + V++ + G+ +
Sbjct: 7 LGMRHMLMGTFLFSIGSLLIKLAGERIPTLEMLFVRGLVGIGFVWWLLRRTGVGMLGTRR 66
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+L + YA++ + F P + L L ERL
Sbjct: 67 V--------LLTIRGVVGFAALFAEFYAIIHLPLADATVILFTHPAVVALLAWAVLGERL 118
Query: 144 NHLQIIAALLIILSLLIM----TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++A + + + ++ L G P L +AVT + ++ + S
Sbjct: 119 GLRGLLAVGISLTGVAVVCRPAFLFGGGPSLLDPLAVTVALCGVGVTSLAILSVRALAKT 178
Query: 200 MCV--LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + + +++G + + G +
Sbjct: 179 EHPAVVMLYPPLIMTIVSPLLAQGWLWPTPLEWGYMLGIAAFMNAGQYYMTRGYAIESAA 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + + IL + D ++V +
Sbjct: 239 RISAVTCLEIVFAAFWGASILGEIPDGWTVAGGLLIVAGTI 279
>gi|254476540|ref|ZP_05089926.1| ABC transporter, membrane spanning protein [Ruegeria sp. R11]
gi|214030783|gb|EEB71618.1| ABC transporter, membrane spanning protein [Ruegeria sp. R11]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 82/291 (28%), Gaps = 12/291 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + + L+ + + + R+ + + + GL L+
Sbjct: 13 LLFLGVIWGASFMAVTVALQGFGPMSIAALRIFSAALCLLVLVYAMGIGLPSLRTRDGRI 72
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLNHLQ 147
V L A+ + + V P+ + L + E++ +
Sbjct: 73 IWVCALGMGFFTNALPFSLLSWGQTYVASGFAGVCMAVVPLFVLPLAHVLVPGEQMTLRR 132
Query: 148 IIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
I+ L+ ++++ + + + T +
Sbjct: 133 TISFLIGFAGVVVLIGLDAFRSAGTDFESLARLACLGASLCYAIGSIITRLCPQVNMLSL 192
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIP-DTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L+ AL V + G L + + + + A +
Sbjct: 193 SAAALSCGALIIVPAALWQEGLPQNLPPRDALLAVAYLGLVPTALAQVLLVQVARSAGPA 252
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + Y P+ ++ IL + + +++ +V+ P
Sbjct: 253 FLSTVNYQVPVWAVLFGALILNESLPPQLFAALALILGGLVLSRAPAHRQR 303
>gi|198422418|ref|XP_002120287.1| PREDICTED: similar to Transmembrane protein 20 [Ciona intestinalis]
Length = 343
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/293 (13%), Positives = 92/293 (31%), Gaps = 13/293 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L +L+ + L + ++ + +EV+ R + I Y + D L
Sbjct: 41 GMLCCILTSVLFAVNALMVKMVKSIGPIEVLGARCWVQFFMLLPFITY--NWMHNKVDFL 98
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L + + F +L F++ V ++ +VFL ER
Sbjct: 99 GPRNTFKLLCLRSLTGSTAAMFLYQSLQRLPLGDAVTISFLSLVFTMLFAAVFLNERPTV 158
Query: 146 LQIIAALLIILSLLIMTLH---------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L II +++II ++++ L I + + V
Sbjct: 159 LDIIFSIVIIAGVVLVAQPPFLFDSSVTYDTERLYGTIFGILCSAMAGVTFVIVRKLGIA 218
Query: 197 FIEMCVLAIPAL--FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + E F + ++I G+ + ++
Sbjct: 219 THATLNVFYYSFAGSITSLIFTTTIETFKFPCSSEIQYIIFAGIAGCGAQIFMALALQYE 278
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ T +++ +L V IL+ ++ +V ++ + + N
Sbjct: 279 RAGTFSMLKSFQIILSFAFQVIILQDIPSSLSLGGAALVFASIFGIAVRKIYN 331
Score = 49.1 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 41/138 (29%)
Query: 163 LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHF 222
L + +V ++ K + C + L + + +
Sbjct: 37 FMGFGMLCCILTSVLFAVNALMVKMVKSIGPIEVLGARCWVQFFMLLPFITYNWMHNKVD 96
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
FLG L L S ++R L + + + + ++ + L +
Sbjct: 97 FLGPRNTFKLLCLRSLTGSTAAMFLYQSLQRLPLGDAVTISFLSLVFTMLFAAVFLNERP 156
Query: 283 DTVRTIVFGIVVIAMVVY 300
+ I +++ +V+
Sbjct: 157 TVLDIIFSIVIIAGVVLV 174
>gi|104783729|ref|YP_610227.1| hypothetical protein PSEEN4787 [Pseudomonas entomophila L48]
gi|95112716|emb|CAK17444.1| putative transporter [Pseudomonas entomophila L48]
Length = 306
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 81/286 (28%), Gaps = 4/286 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G Y++WG T L + + + + R + + + + + + G +
Sbjct: 11 LVGAFLAL--YLVWGSTYLVIRIGVASWPPMLMAGVRFVIAG-CLLYGFLRWRGVPAPTW 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ A+G L+ S V + T V + G +
Sbjct: 68 PQWRAAGAIGFLLLSCGNGGVTLAEHAGVASGVAALAVATVPLFTLVFGLMFGHRNSRLE 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +L++ S + + A A+ +
Sbjct: 128 WAGIALGLVGIGMLNMGSNLQASPMGAALILFAAAAWAFGSVWSKNLPLPQGAMASAAEM 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + + F + Y +K + +
Sbjct: 188 LVGGVVLLIASALSGERMTQMPTAAGWGALAYLVFFGSILAFSAYMYLLKHVRPAAATSY 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P + ++ + + I + +++ A+V+ LP +
Sbjct: 248 AYVNPAVAVLLGIVFAGEQIGAEECVAMAVIIGAVVLIGLPQWRKA 293
>gi|297160949|gb|ADI10661.1| hypothetical protein SBI_07541 [Streptomyces bingchenggensis BCW-1]
Length = 337
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 89/291 (30%), Gaps = 17/291 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVS---VLEVISHRVLWSLPGVFFAIV 72
+ +++LP G L+V A WG + V + V R L L + A
Sbjct: 2 QPSSALPVWRGALYVAIAATAWGTGGAVATEMYDVGGIDPVAVTFWRFLTGLGLLLAAHS 61
Query: 73 YFSGGLSLLKDTLKNPK--AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ +L+ + + +AV + ++ + + + + +
Sbjct: 62 VWRARRPETVSSLRAMFAANPRRALITGFGMAVAQSAYFASVQQAGLAVGTVATLGSGPV 121
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWS 179
V +G+ AA++ ++ L + + GI L+ A
Sbjct: 122 LVAVGARLTLGERTGAAGTAAVVSGVAGLALLMGGAEGSTGPNPLLGIGYALLSAAGYAG 181
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH-FFLGNIPDTLFLIGYGL 238
R +S F + + L + + G L L +
Sbjct: 182 VTLLGRFAGRDNASGAFESTLPGFTVGMLCLLPMAVWEGLVPDMDRPAWTLGLILYLGAV 241
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ + + G++ + +T ++ PL V + + ++ +
Sbjct: 242 PTALAYILLFIGLRVVRATTASVVALVDPLTAAAIGVLVFGERLNAIALTG 292
>gi|167034868|ref|YP_001670099.1| hypothetical protein PputGB1_3873 [Pseudomonas putida GB-1]
gi|166861356|gb|ABY99763.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
GB-1]
Length = 298
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 98/286 (34%), Gaps = 11/286 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G+L + A ++ G + + + VL+V+ R ++ + F
Sbjct: 1 MDSSLRRGSLEMVAAMLISGTIGWFV-LVSGLPVLDVVFWRCVFGAVTLLAICAAFG--- 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LL+ + + A + + S + +W + + + Y V P + V L ++F
Sbjct: 57 -LLRPGVISRTAFLLAIASGVAIVGNWLLLFASYSRASIAIGTAVYNVQPFMLVGLAALF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L E++ ++ + L +L + SG L +A +A + +
Sbjct: 116 LGEKITLAKVTWLSVAFLGMLAIVSAHGAGQGSGEDYLLGIALALGAALLYAIAALIIKR 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + L A ++ + L + ++ + I+
Sbjct: 176 LSGTPPHLIALIQVATGALLLAPWVKLGGLPSEVPALASLLTLGMVHTGLMYVLLYSAIQ 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
R + G + + P+ I+ + ++ + G++++A
Sbjct: 236 RLPTALTGALSFIYPIAAILVDWVAFGHRLAPLQWLGVGLILLAAA 281
>gi|52081586|ref|YP_080377.1| hypothetical protein BL02561 [Bacillus licheniformis ATCC 14580]
gi|52004797|gb|AAU24739.1| hypothetical protein BL02561 [Bacillus licheniformis ATCC 14580]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 93/295 (31%), Gaps = 13/295 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T+ + + + + ++ + L + +R+ +S +F +
Sbjct: 2 RTTLYPYIALVVGVLAVSSSAIFVR-LSTADAGIIAFYRLFFSALLIFPFFWGKRKEVLG 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ K + LA H+ + +L + + P+ S K
Sbjct: 61 F-----SKKDWLFSAAAGFFLAFHFILWFRSLEYTSVASSVVLVTLQPIFSFIGTYFLFK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
ER++ II+ALL I + ++ + +A
Sbjct: 116 ERVSFAGIISALLAIGGSVYISWGDFKVSGQALYGDILALLACALVTAYLLFGQHVRKRH 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
V I AL ++ FSG F F + + +F++ +K
Sbjct: 176 SLTVYTFIVYGISALTLCLYCLFSGAAFFSYPASDWGYFFLLAVIPTLLGHSLFNWVLKW 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + P+ + + +IL + + + I ++ +++++ I
Sbjct: 236 LSTNMISVAILFEPVGAVALAYWILDESVMMTQVIGGAVIFSGIILFMASQSIRK 290
>gi|303251912|ref|ZP_07338083.1| hypothetical protein APP2_0239 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247068|ref|ZP_07529121.1| hypothetical protein appser2_660 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302649342|gb|EFL79527.1| hypothetical protein APP2_0239 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306856437|gb|EFM88587.1| hypothetical protein appser2_660 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 282
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 76/277 (27%), Gaps = 3/277 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V I +G + ++ + S ++ RV+ +L + ++ L L
Sbjct: 3 KHSLALLKVHFTAIFFGASGIFGALITS-SADILVLGRVIIALACISLYFLWKKQPLVKL 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + +A + + + SF FV + L
Sbjct: 62 TRRELFSQILSGALLAAHWVTFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLS 119
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+IA + ++ + L L + + + +
Sbjct: 120 YREGFLLIAITIGLMLVTPEFTFGNNATLGLLWGILSALVYGVLAIVNRKTMSKLSGTQT 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ ++ FS + + + +F + T +
Sbjct: 180 SWWQYLVAMLILLPFSAKGLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASM 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ I + + I I+++++
Sbjct: 240 IISLEPVYAIAIAWLCFNEVPTLTMLIGGAIILLSVA 276
>gi|209809006|ref|YP_002264544.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
gi|208010568|emb|CAQ80938.1| integral membrane protein [Aliivibrio salmonicida LFI1238]
Length = 291
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/289 (8%), Positives = 75/289 (25%), Gaps = 1/289 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M+ L +F LWG + L+ + + +I RV ++ + + L
Sbjct: 1 MINILSLFTLAALWGGSFLFVRIAANPLGPAVLIETRVAFAALTLLVVSFFLKKSLQFTS 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +L + + ++ + + +
Sbjct: 61 NLKHFFILGLFNSALPFLLFAYSAQVLNVSTLAILNSSAPIWGAIIGAVWTRTWLTKEVV 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +++ + + + + + +Y A S F
Sbjct: 121 FGLVLGMIGVSVLVGWEAINVGDEAIIPMITALMGAFSYGIATNYAKNAPSVEPFNNAHG 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
++ V+ + + + + ++ I S+ +
Sbjct: 181 SMWASVILVLPLVPFIQVRETISSDTMLSVFALGAVCTGLAYLLYFRLINELGASSALSV 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P I+ L + + I +VV + +
Sbjct: 241 TFLIPAFGILWGYLFLGETVGINAIIGTILVVTGTMFVTGFYRKLLPRK 289
>gi|241205580|ref|YP_002976676.1| hypothetical protein Rleg_2877 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859470|gb|ACS57137.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/288 (9%), Positives = 80/288 (27%), Gaps = 6/288 (2%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ ++WG + + + ++ V L ++ R+L + + I ++LK +
Sbjct: 12 LLVLLGLIWGGSFFFARIAVQHVPPLTLVFFRLLLAALALHIYIAGRFDFYAILKARWRE 71
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+G++ + + +G + + + + F L
Sbjct: 72 FLILGLINNALPHALIFFGQTRIGAGLAAILNATTPIWTVLIANYFTSDEKLSPAKIAGC 131
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++ I+ + G L + A+++ K +
Sbjct: 132 LVGLAGTIVLIGPGMSAGGEAPLWALLLPVLAAISYGFAATYGKRFKNVPAPVTAAGQLT 191
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + L L +F + ++ + A + ++
Sbjct: 192 ASSLIALPLSLLADRPWALAAPPLDALLAILALALLSTAFGYILYFRIMATAGATNASLV 251
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P I+ V L + + ++ +V+ K
Sbjct: 252 TLLVPPSAILLGVLFLGERLALSEFAGMALIGFGLVILDGRAYRLLAK 299
>gi|154688032|ref|YP_001423193.1| YxxF [Bacillus amyloliquefaciens FZB42]
gi|154353883|gb|ABS75962.1| YxxF [Bacillus amyloliquefaciens FZB42]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 97/287 (33%), Gaps = 11/287 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + +++G +++ V +E++ R L + + +
Sbjct: 10 VIKMVISMVIFGSIGFFSEH-TNVPSIELVFVRCLCASLFLGVCWFGSGRY----RTEQW 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + V + L ++W F + + Y + PV+ + LGS+ +E+L+ +
Sbjct: 65 NRREVLQTLACGFFLVLNWVFLFKSFEETSVTIAISVYHLAPVLVLLLGSLIYREKLHMV 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------FFIEM 200
+ + ++ L +++ +G S + A + G +
Sbjct: 125 SVTSIVICFLGTALISGINGSTSFSQLMGSGIIWAVLAALFYAFTTLAGKGINSLSPYAV 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L ++ G L ++ + + + V+ +F ++ +
Sbjct: 185 TCLQTGLGVIILLPFVRFGAFSDLSHVNWIMIVSTGIIHTGIVYLLFFDSLRFLSTRFIS 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I+ + P + IV D +++ ++ M + L+
Sbjct: 245 IIVFLDPAVAIVLDTVFTGFRPDLYQSLGIVLIFAGMALSLIRKQKA 291
>gi|11497882|ref|NP_069104.1| hypothetical protein AF0266 [Archaeoglobus fulgidus DSM 4304]
gi|6136504|sp|O29973|Y266_ARCFU RecName: Full=Uncharacterized transporter AF_0266
gi|2650369|gb|AAB90963.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 276
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 96/277 (34%), Gaps = 11/277 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + WG+ ++ + +S + + S R + I+ K
Sbjct: 5 IVLALTVTFWGLAFTAIKYSVRFLSPIAIASLRFAIANTLFAVIIILGKRI--------K 56
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++V+ F + + S + P+ + L ++FL+ER+ +
Sbjct: 57 WKDLPKVFALGIFGVSVYHVFLNLGEVYISSGVASVVISLAPIFVLILSAIFLRERITYS 116
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+++ ++ L +++++ S + +A+ + + T +
Sbjct: 117 KVVGIIIAFLGVVVISEPSYANIYGIALVMVSTVAAAIYTTFGKSLLSKYNPITLTSNAM 176
Query: 207 ALFYVVWNGFSGGEHFFLGN--IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L + F LG + F + + Y +++ + S +
Sbjct: 177 VLGSIPLYPFLPDSIRSLGGDLNLIGSIVFLGIFSTFFGYLGWYYFLEKEEASRASVFLL 236
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P++ +++ +L +P+ G+V++ + + +
Sbjct: 237 AIPVVSLLAGNILLAEPLTLRTVAGSGLVLLGIYIVV 273
Score = 40.3 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 13/132 (9%), Positives = 36/132 (27%)
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ I + + + + S F + + ++ +
Sbjct: 1 MKKWIVLALTVTFWGLAFTAIKYSVRFLSPIAIASLRFAIANTLFAVIIILGKRIKWKDL 60
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
S + G ++ AP+ +++ S L++ I + +
Sbjct: 61 PKVFALGIFGVSVYHVFLNLGEVYISSGVASVVISLAPIFVLILSAIFLRERITYSKVVG 120
Query: 290 FGIVVIAMVVYL 301
I + +VV
Sbjct: 121 IIIAFLGVVVIS 132
>gi|84515851|ref|ZP_01003212.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
gi|84510293|gb|EAQ06749.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
Length = 282
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 84/282 (29%), Gaps = 5/282 (1%)
Query: 28 LFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + ++ I + +V+ ++ R + V SG +
Sbjct: 1 MLMILTTFIFAIQDGISQHLAVNNNVVMIVMIRYWFFAAFVIAIARRQSGSIRAA----A 56
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K + + T+LA+ + A + + + P++ L L E +
Sbjct: 57 RTKQPLLQIARGTLLALEICVMVTAFVYLGLVESHAIFACYPLLIAALSGPVLGEAVGWR 116
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ A + + +L++ A SA+ FA + +
Sbjct: 117 RWAAIGIGFVGVLVILQPGFAVFSPAAAIPLASAFMFALYGLLTRYAARLDNTTTSFFWT 176
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
V G + + D ++I + + + A+ S V Y
Sbjct: 177 GTSGAVVMTVVGVWFWEPMSAADWRWMITLCITGVTAHWLLIKTYEVAEASAVQPFAYLQ 236
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ V V +L + I I IVV A + L +
Sbjct: 237 LVFASVIGVGVLGETIRPNVAIGAAIVVGAGLFTLWRARQKA 278
>gi|313113143|ref|ZP_07798770.1| integral membrane protein DUF6 [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310624537|gb|EFQ07865.1| integral membrane protein DUF6 [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 306
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/289 (9%), Positives = 80/289 (27%), Gaps = 11/289 (3%)
Query: 36 LWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK------NPK 89
+WG + + ++ R ++ + ++ F K K
Sbjct: 17 IWGTAFVAQSAGSGMGAYSFLAGRSWLAVLVLIPTVMVFDAIRRKSGTDAKPKTAAEKKK 76
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ T+L + + V+ V + +FL + + +
Sbjct: 77 LLAAGFVCGTLLFAASAAQQIGITINPSTAKAGFLTAMYVVLVPVFGLFLGRKGSAQLWV 136
Query: 150 AALLIILSLLIMTLHSGI-----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ ++ +L L ++ + +G L ++ +G + +
Sbjct: 137 SMVVAVLGLYLLCMKNGFGSIESSDWLLLSCAVLFSFQIIAVDHFSPQVDGVRLSLAEFL 196
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ ++ L + + + + G + + ++
Sbjct: 197 VVSVESTAAALLFETPSAAQFAENALPILYCGIMSSGVAYTLQILGQRDLNPAIASLIMC 256
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + +L Q + ++ A+V+ LP + KT
Sbjct: 257 LESVFSALGGWMLLHQNLSAREVFGCVLIFAAVVLAQLPLEMLHRAKKT 305
>gi|264679456|ref|YP_003279363.1| RarD protein, DMT superfamily transporter [Comamonas testosteroni
CNB-2]
gi|262209969|gb|ACY34067.1| RarD protein, DMT superfamily transporter [Comamonas testosteroni
CNB-2]
Length = 299
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 122/296 (41%), Gaps = 7/296 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSLL 81
G + A +L+ + FL + ++ RVL +LP + LL
Sbjct: 6 KGVVVSVLASVLFASLYYLSPFLAPLDGEQIFGWRVLVTLPFTTALLFALKEVAAVRDLL 65
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
L P+ +LV SA +L V F++A + + S YF+ P++ V G V E
Sbjct: 66 ARALAQPRFGMLLVLSAALLGVQLWIFMWAPMNGRALPVSLGYFLLPLVMVVAGRVLFAE 125
Query: 142 RLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
RL Q +A LL + G+ + +A+ ++ Y R+ + + G +I+M
Sbjct: 126 RLTLGQSLATLLAAAGVAHEFWQAGGMSWETWVVALGYTVYFSLRRWLQTDTLAGHWIDM 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L A+ + + S L G++++ ++ + L G
Sbjct: 186 ALLVPVAIAFTLRTPDSWPLVAGHPT--LWGLLPLLGIVSAVALALYMIASRWLPLGLFG 243
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++ Y P L++V + L + ++ + + + ++ A+ + + + +S + ++ S
Sbjct: 244 LLSYVEPALLVVVAWL-LGESMEPQQQLSYALIFAAVGLLIGDGLRHSWRGRSHTS 298
>gi|153009562|ref|YP_001370777.1| hypothetical protein Oant_2232 [Ochrobactrum anthropi ATCC 49188]
gi|151561450|gb|ABS14948.1| protein of unknown function DUF6 transmembrane [Ochrobactrum
anthropi ATCC 49188]
Length = 295
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 96/290 (33%), Gaps = 13/290 (4%)
Query: 30 VFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + I T++L +++ + + R +++ + L+N
Sbjct: 1 MLLAMGTFTIGDTITKYLLTEMNSGQYMLIRGIFATVLIGLLAWRHG--------ALRNL 52
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
M + V +IY+L S + TP++ ++FLKE++ +
Sbjct: 53 SLEKMTILRVVGEVVATITYIYSLGHLSQAFCSAVFQATPLVVTLGAALFLKEKVGWRRW 112
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV----GSSEGFFIEMCVLA 204
L+ ++ +LI+ SLA A T + + + + L
Sbjct: 113 SCILVGLVGVLIIIRPGTDGAASLAAVAVLLASVGFAATRDIATRRVPAHVPTLYLSTLT 172
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ + I + +L + ++ ++S V Y
Sbjct: 173 AGAITLTGGALTVPMGGWQPVGITAVGAMAIAAVLLLVGYHFIILAMREGEVSFVSPFRY 232
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ L I S I + D + +VV + V + + + + K
Sbjct: 233 SSLLWAIGLSTLIFGEAPDIYTIMGSVLVVGSGVYMVYRENVLKKRERNK 282
>gi|153829083|ref|ZP_01981750.1| putative membrane protein [Vibrio cholerae 623-39]
gi|148875411|gb|EDL73546.1| putative membrane protein [Vibrio cholerae 623-39]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACALSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWHENLNWQSITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|114707161|ref|ZP_01440059.1| hypothetical protein FP2506_04621 [Fulvimarina pelagi HTCC2506]
gi|114537357|gb|EAU40483.1| hypothetical protein FP2506_04621 [Fulvimarina pelagi HTCC2506]
Length = 298
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 83/293 (28%), Gaps = 8/293 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G L + L+ +FL E SV +V+ R + +L + + + G
Sbjct: 3 RATLGILMMLVGIFLFMANDALGKFLVETYSVGQVLLLRSVAALIILLPLV--WRVGFRS 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + + + +F+ + + Y L P+ L + L
Sbjct: 61 LVKVERPGQQILRTIFATAEVTAFYAALAYLPLAATLSYWLA----APIFVAALAPLLLG 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + A L+ +LI+ S A + + FA + S +
Sbjct: 117 ETVGLRRWTAILIGFGGVLIVLQPSAETFSGGAPIAIFGSLAFALMMLTTRSLRETPDSV 176
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V S L ++ + K +T+
Sbjct: 177 LVFWQTVGALAAGIVLSLVAWTPLTVAGFLALSFLG-VVALAAHLCVTRAFKLGDAATIA 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++YT + + + +++ + + + + T
Sbjct: 236 PLQYTMLPWATLFGFLFFDEFPKWTTLLGAFVIIGSGLFIFFRERQVAKREAT 288
>gi|330829506|ref|YP_004392458.1| Drug/metabolite transporter [Aeromonas veronii B565]
gi|328804642|gb|AEB49841.1| Drug/metabolite transporter [Aeromonas veronii B565]
Length = 300
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/273 (12%), Positives = 82/273 (30%), Gaps = 11/273 (4%)
Query: 47 LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWG 106
L SV+E++ R FF L + L+ + + V
Sbjct: 33 LHGYSVMEMVWFR--------FFVPFLGLLLLLPRRTMSALLAVDRWLLLRSLLFLVCAL 84
Query: 107 FFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG 166
+ AL + + + + V G +F +ERL ++ A LL + +L++T G
Sbjct: 85 VSVIALAHVPLNVYTIICQLGSLAFVVAGVIFFRERLTRAKVAAVLLGLFGVLVVTHPDG 144
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY---VVWNGFSGGEHFF 223
+ + + + +L + +
Sbjct: 145 GDANLYYLLPLVIVLANTGYNLITKLVDPRLTTLDILIATCFMLGMVAMVALCWQPALWR 204
Query: 224 LGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPID 283
+ D +L+ ++ ++ A+ ST+ Y + + +
Sbjct: 205 FPGLADWPYLLALPVVTLLSQYCLIKAMQYAQASTLAPFFYFQIFFSTLCGYLMFGEMPT 264
Query: 284 TVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
++V+A +V + +++ +
Sbjct: 265 LSSMAGCLLIVLAGIVVIHSQRRARVLARSEAA 297
>gi|167035771|ref|YP_001671002.1| hypothetical protein PputGB1_4780 [Pseudomonas putida GB-1]
gi|166862259|gb|ABZ00667.1| protein of unknown function DUF6 transmembrane [Pseudomonas putida
GB-1]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 85/286 (29%), Gaps = 4/286 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G Y++WG T L+ + +E + + R L + G+ + + + G +
Sbjct: 11 LIGAFLAL--YLVWGSTYLFIRIGVESWPPMLMAGVRFLIAG-GLLYGFLRWRGVPAPTW 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ A+G L+ S V + T + + G K
Sbjct: 68 PQWRAAGAIGFLLLSCGNGGVTVAEHAGVASGVAALAVATVPLFTLLFGLLFGHRNSKLE 127
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + + +L+L S + + A A+ +
Sbjct: 128 WAGIALGLVGIGLLNLGSNLQASPMGAALILFAAASWAFGSVWSKTLPLPQGPMASAAEM 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L A+ + + F + Y +K + +
Sbjct: 188 LVGGAVLLLGSVLSGERMTQMPTAAGWGALAYLVFFGSILAFSAYMYLLKHVRPAAATSY 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y P + ++ + + I + +++ A+V+ LP +
Sbjct: 248 AYVNPAVAVLLGIVFAGEQIGAEECVAMAVIIGAVVLIGLPQWRKA 293
>gi|294102263|ref|YP_003554121.1| protein of unknown function DUF6 transmembrane [Aminobacterium
colombiense DSM 12261]
gi|293617243|gb|ADE57397.1| protein of unknown function DUF6 transmembrane [Aminobacterium
colombiense DSM 12261]
Length = 306
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 65/272 (23%), Gaps = 1/272 (0%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG+ + + L S +++ R S + L+
Sbjct: 15 ALVLIALFWGVGFVAMKDALVSFSPFWLLALRFTASFILMAIIFKKRLRKLTAANLKAGL 74
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
V + + AT F++ +
Sbjct: 75 LIGVFLFLGFATQTIGLTFTSPGKQAFITATYVVIVPFLSWGLKKIFPGYLSFVASLICL 134
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
ALL + L + A + + + + A
Sbjct: 135 AGMALLTLQGNGDTLSTFNKGDLLTFACAIFFACHILAIEMFASKMDPLVLATLQIGTTA 194
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + + F I + K + I+
Sbjct: 195 LLSFACALLFEEWPGSIASSAWWSIAFTVLFCTVFALSIQNAAQKFTPSTHAAILLSLES 254
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +SSV IL + + +++IA+++
Sbjct: 255 VFGALSSVLILGEVFTIPMVLGCFLILIAVLL 286
>gi|227538338|ref|ZP_03968387.1| drug/Metabolite exporter family transporter [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241853|gb|EEI91868.1| drug/Metabolite exporter family transporter [Sphingobacterium
spiritivorum ATCC 33300]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 95/298 (31%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + VF +GI + + + + ++ EVI +VL+ + ++
Sbjct: 1 MEKLKGAIAVFLGASSFGILSTFVKKAYAQNFTLAEVIGMQVLFGMVILWAIYFGVRIFN 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
D + ++ S + + + L I + +
Sbjct: 61 KERLDKYPKKTKLWTILISGFSTGLVSILYYKCVSLVPASLAIVLLMQYIWIGALIEFII 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS--------AYCFARKTIPV 190
+ + + Q I ++I+LS L+ T + S +A A
Sbjct: 121 FRSKPSRKQAIGIVVILLSTLLATGLLDKGIESFDLAGIGYGLLAATGYASFLIVNGRVG 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ + + LG+ LI +F+YG
Sbjct: 181 NDYPPIQKSGLMVTGSCILIFILFRPISLFTGELGDGIWYFGLILSIFGTVLPPLLFAYG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I + +S I+ + + S F+L + + ++ I I+++ +V L +
Sbjct: 241 IPKIGVSLSSILSAAELPVAVCMSYFVLTEHVTLLQWIGVVIILLIVVWMNLNKEKAT 298
>gi|213155569|ref|YP_002317614.1| transporter, drug/metabolite exporter family [Acinetobacter
baumannii AB0057]
gi|213054729|gb|ACJ39631.1| transporter, drug/metabolite exporter family [Acinetobacter
baumannii AB0057]
Length = 316
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 85/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + L
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFLSVWRQRRLVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + + Y F +
Sbjct: 128 FAVFGSILSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKKWQLPLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVLFHLPLIFWFGLDALNAQNAPSAIYAGVFASLIAPLVWMLAVQQLGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + + L + T ++++ +++
Sbjct: 248 RTSIFMNLVPVFTAIIASIWLSEQWTIYHTFGGIMILVGIIM 289
>gi|254441355|ref|ZP_05054848.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
gi|198251433|gb|EDY75748.1| Integral membrane protein DUF6 [Octadecabacter antarcticus 307]
Length = 298
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 91/297 (30%), Gaps = 4/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITP-LYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ PT+ L + ++WG T + LE L V R + + +
Sbjct: 2 TTQPTLFNWLSILLLGLIWGGTFMVVAIALEGYGPLTVACARTTLGAVTLLLLVRFMGRQ 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSF---SYFVTPVISVFL 134
+ ++ +GML + + WG + + V S
Sbjct: 62 MPHGREVWGYLAVIGMLNTALPFALLSWGQQYVPSAFAGISMAVLPLFVLPMAHVFSDEK 121
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
S + I AA+LI + + S I + S + T +
Sbjct: 122 MSTRKTVGVIWGFIGAAVLIGPTAFDFSQASLALPQLACIGASLSYAISSVLTRVCPPID 181
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + A+F + G ++ + + +F + I+ A
Sbjct: 182 SIVMAALTLVVGAIFLIPAMLVFEGVPVWVDGRAGYAIVFLGLVPTAFAALLRVQTIRTA 241
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ ++ Y P+ ++ V++L + + +++ + + + +
Sbjct: 242 GSVFMTLVNYQVPVWSMIFGVWVLSEVLPLRFFAALALILCGLAISQWVALRKLLRR 298
>gi|86135185|ref|ZP_01053767.1| drug/metabolite permease [Polaribacter sp. MED152]
gi|85822048|gb|EAQ43195.1| drug/metabolite permease [Polaribacter sp. MED152]
Length = 285
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 94/280 (33%), Gaps = 9/280 (3%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ A + + + + + +I R + ++ +F Y + T+K+ K
Sbjct: 12 LLLASFFISTSGVLGKHIA-MPSEVIIWFRSILAMVFLFVFCRY-----KQINLTIKSTK 65
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ ++A HW + YAL + + + P+I L +F K + N + I+
Sbjct: 66 DYKTFIIGGVLMAAHWVTYFYALKLSNVAIGILTLYTFPIIIALLEPLFFKIKFNPIYIL 125
Query: 150 AALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+++L L I+T L + V + R I + M +
Sbjct: 126 LGFMVLLGLFILTPEFDLESSQLKGVLFGVFSAFCYAIRILIMKKHVANYNGTMLMFYQT 185
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ L+ + + + + +K +T I+
Sbjct: 186 VIITILLFPVLFFMDLSGLESQLPYILLLALITTAIGHSLMLHSLKFFSAATASIISSLQ 245
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P+ I + L++ +++ +++ L +
Sbjct: 246 PIFGIGLAYLFLEEIPTVHTFWGGSLILATVIIESLRSKK 285
>gi|163847511|ref|YP_001635555.1| hypothetical protein Caur_1951 [Chloroflexus aurantiacus J-10-fl]
gi|222525360|ref|YP_002569831.1| hypothetical protein Chy400_2105 [Chloroflexus sp. Y-400-fl]
gi|163668800|gb|ABY35166.1| protein of unknown function DUF6 transmembrane [Chloroflexus
aurantiacus J-10-fl]
gi|222449239|gb|ACM53505.1| protein of unknown function DUF6 transmembrane [Chloroflexus sp.
Y-400-fl]
Length = 307
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/310 (9%), Positives = 86/310 (27%), Gaps = 15/310 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
++ + +++ + +LW + ++ L + +S R + L + + F
Sbjct: 1 MKSQTTTSLLANVAPLLFVLLWSTGFIGARYGLPHIEPFTFLSIRFVLVLILLGALTIMF 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ VG+L+ S + V LT+ + PV++
Sbjct: 61 RQPWLRQPVAYGHSAIVGVLLHSGYLGGVF----FAIDGGMPAGLTALIVSLQPVLTALF 116
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFA 184
L E++ Q + L ++ + + + + +A+ +
Sbjct: 117 SQWTLGEQITARQWLGLALGLVGVTAVVGDKLLFTDTPVVTPITLAGAIVALLSTTAGTL 176
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ L +L+
Sbjct: 177 YQKRFGVGLPLLSGTWAQYLGALALTAPLALLFETHEIEWRPELIGSLLWLTLVLSIGAI 236
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ I+ + V + Y P V + + + + + I + I + + ++
Sbjct: 237 LLLMVLIRARSAARVSSLFYLVPPATAVEAWLLFGERLGLLAIIGLVVASIGVALVVVTP 296
Query: 305 VINSGKNKTK 314
+ + +
Sbjct: 297 PSKAKSGRHR 306
>gi|317152028|ref|YP_004120076.1| hypothetical protein Daes_0304 [Desulfovibrio aespoeensis Aspo-2]
gi|316942279|gb|ADU61330.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
aespoeensis Aspo-2]
Length = 311
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 88/290 (30%), Gaps = 17/290 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++ G + + + + ++ V + R + +L + + GGL L
Sbjct: 26 YACLALAMVIVGSSVVAGKIMVAELPVFLASALRFVLALAILLPLLRIREGGLPRL---- 81
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + S + ++ L TP L VFL++R
Sbjct: 82 SRRSWLLLAGQSLCGSFLFTVCLLHGLKLTTPASAGIITATTPACMGLLAWVFLRDRPTR 141
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI----------AVTWSAYCFARKTIPVGSSEG 195
+L +L +L + G P AV + + +
Sbjct: 142 RTGAGMVLSVLGVLAVNAMGGEPGGIAPAPLTGNLLVLCAVGFESLFLLVRKGVPEPLTP 201
Query: 196 FFIEMCVLAIPALFYVVWNG--FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ ++++ + + + I + + + GI R
Sbjct: 202 LAASTIISLFGLVWFLPMGCVELAATDLAAVSLIGWLSVAYYGAFVTVLAYVFWFAGITR 261
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
ST G+ P+ +V S +L +P+ + V+ +V+
Sbjct: 262 VSASTAGVFTAVMPVSALVLSATLLGEPVGWPQLAGCVCVLGGIVLISRR 311
>gi|195055348|ref|XP_001994581.1| GH17324 [Drosophila grimshawi]
gi|193892344|gb|EDV91210.1| GH17324 [Drosophila grimshawi]
Length = 348
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/300 (12%), Positives = 89/300 (29%), Gaps = 26/300 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + + L V+ +E+ S R + + I +
Sbjct: 36 LGIILATLSSLFFSLCSVIVKGLVDVNPMELASFRFV---GVLLPTIPILIYTRQPVFPE 92
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K + T L + YA S F TPV FLKE
Sbjct: 93 GKRVILMLRCFMGTTGLMLS----FYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCT 148
Query: 145 HLQIIAALLIILSLLIMTLHSGIP-------------------LLSLAIAVTWSAYCFAR 185
++ + +L ++++T + +A +
Sbjct: 149 LFNVLTINMTLLGVVLITRPPWVFGDPVSELETEKYSDKTYDIWGPVAAISSTLFGANVY 208
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + F + M AL Y + S G + D ++ G+ +
Sbjct: 209 ILLRALKNLHFSVIMTNFGAIALVYTLIVCGSIGAVCWPSCGRDRWLVVVLGIFSFLGQI 268
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + ++ + V I + + + + + +VV ++++ +
Sbjct: 269 LLTLSLQVEQAGPVAIARCADIVFAFIWQMIFFGEAPNAYSLFGALMVVSSVILTAMKKW 328
>gi|163802199|ref|ZP_02196094.1| hypothetical protein 1103602000603_AND4_17444 [Vibrio sp. AND4]
gi|159174004|gb|EDP58814.1| hypothetical protein AND4_17444 [Vibrio sp. AND4]
Length = 339
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/314 (10%), Positives = 91/314 (28%), Gaps = 14/314 (4%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFA 70
G+S + F A +LW + L + + +++++ + S +
Sbjct: 29 SGVSSHRGIMNERRALGFGLSAVLLWSTVATAFKLTLAEFTPIQMLTVASVVSAIALITV 88
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
+ NP +L ++ A + +
Sbjct: 89 CGVQEKLNQISSTFFSNPWYYLLL--GFINPLAYYLILFKAYDLLPASQAQAINYSWAIT 146
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ +VFL + + IA L ++++ + + + + +
Sbjct: 147 LTMMAAVFLGQSIRRKDWIAGSFSYLGVIVIATKGDVLGMEFESPLGVALALLSTLLWAS 206
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGG-------EHFFLGNIPDTLFLIGYGLLNSFV 243
+ + L ++V F+ G +
Sbjct: 207 YWILNTKHQADPVIGVLLGFLVAIPFAIGLSIYEGASWSKITAKGWAAVTYVGLFEMGIT 266
Query: 244 FCIFSYGIKRA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F ++ +K + + + + +P + ++ I+ + I I +++ +V+
Sbjct: 267 FVLWLTALKLTENTARISNLIFASPFISLILLATIIDEDIHPSTLIGLVLIISGLVI--- 323
Query: 303 PTVINSGKNKTKKS 316
V + K K K+
Sbjct: 324 QQVTFNKKQKPAKN 337
>gi|153826652|ref|ZP_01979319.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149739590|gb|EDM53814.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACALSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|117619004|ref|YP_856531.1| drug/metabolite exporter family transporter [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117560411|gb|ABK37359.1| transporter, 10 TMS drug/metabolite exporter (DME) family
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 305
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 93/298 (31%), Gaps = 13/298 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ LF F +W + ++ V S + R + + + + +
Sbjct: 3 LAFLFPFSCMAIWAGNAIVSKLAVGVLSPAALAWSRWMVAAIILTPFLA----HRAWRDR 58
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + ++ F YA T +TP+++V L L+ER
Sbjct: 59 AKLRAGFYQLAALALLGMVLNQTFGYYAAQTLGATEIGLMMGLTPLMTVLLSIWLLRERP 118
Query: 144 NHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ ++ IL L I+ GI + S+ + ++ Y +
Sbjct: 119 TWGALLGGVISILGLAILLGQGDPARLFTQGIHIGSVYMLLSAGTYALYSVLLKKWDLGL 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
M + + + + + L L ++ ++ GI
Sbjct: 179 DNWSMLYGQVLCSLLFLTPFYLLVDGQWPDGRALWLILYAGIPTSALSPWLWMQGIALLG 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S I P++ ++ L + + + I G+ + +++ L + +
Sbjct: 239 ASRTAIFMNLLPVMTAGLAISWLGERLTSYHLIGGGMTLFGVLLAQLLVQPVVLRRRR 296
>gi|89092905|ref|ZP_01165857.1| possible transmembrane protein [Oceanospirillum sp. MED92]
gi|89082930|gb|EAR62150.1| possible transmembrane protein [Oceanospirillum sp. MED92]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 90/277 (32%), Gaps = 12/277 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
F + +LWG L T+ + + L++++ + G+ +Y K
Sbjct: 13 GFISIVLWGTLALLTKLTDGAIPPLQLMAMTFFLAYLGMQIRWLYRGESGFRYLKQPKKV 72
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
VG+ + + + A+ S ++ P+ V ++ E L
Sbjct: 73 WLVGIGGYLSYHF-----CYFAAMARAPAVDVSLIAYLWPLFIVLFSALLPGENLKVKHT 127
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ A+L + ++ G L S A A A ++ +
Sbjct: 128 LGAVLALTGCALIITQGGNGLSSEYAAGYLFAAACALIWSSYSVLTRLISQVSTGIVGWY 187
Query: 209 FYV------VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + +I + F + YG+KR + +G++
Sbjct: 188 CLFTAVLAAIAHFIFEQTVLPETSIQWIGIVGLALGPMGLAFFTWDYGMKRGNIQLLGVL 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y+APL+ + V + + + ++VI V+
Sbjct: 248 SYSAPLISTLLLVLFTDELLTKTLLVACLLIVIGSVI 284
Score = 36.8 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 31/102 (30%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M + A + GE F + + + RA V
Sbjct: 40 MAMTFFLAYLGMQIRWLYRGESGFRYLKQPKKVWLVGIGGYLSYHFCYFAAMARAPAVDV 99
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
++ Y PL +++ S + + + T+ + + + +
Sbjct: 100 SLIAYLWPLFIVLFSALLPGENLKVKHTLGAVLALTGCALII 141
>gi|99081217|ref|YP_613371.1| hypothetical protein TM1040_1376 [Ruegeria sp. TM1040]
gi|99037497|gb|ABF64109.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 93/296 (31%), Gaps = 9/296 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVY 73
S + +++ A + + + + + E++ +R L + V AI
Sbjct: 8 SAAAQQNALLRAAIWMIGAILSFSAMAIAGREAGLTLDTFEIMMYRSLVGVLVVAGAITL 67
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + L M F+ L + YA+ F +P+ +
Sbjct: 68 MRRWHLVSSERLTQHGLRNMAHFTGQNL------WFYAVSVIPLAQVFALEFTSPIWVIL 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L +FL E+L ++ +A L + +LI+ S SA FA I
Sbjct: 122 LAPLFLGEKLTRMRALAVALGFVGILIVARPSPQTFNIGLACAAGSAVFFALTNIATKRL 181
Query: 194 EGFFIEMCVLAIPALF--YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ + L + +L+ G + +
Sbjct: 182 TRSESIWSIMFWLTAMQLVLGIVFAGWDMDIALPDAQSLPYLLVIGCAGLSAHFCITNAL 241
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
A + V +++ + + + I + ++ + +++I + ++ +
Sbjct: 242 SLAPAALVVPIDFARLPFIALLAWLIYGESVEIWLFVGAALILIGNFINIVSSRQQ 297
>gi|260494454|ref|ZP_05814584.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|260197616|gb|EEW95133.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
Length = 354
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 80/282 (28%), Gaps = 4/282 (1%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A ++ I ++ L + V + + G+ K
Sbjct: 9 LFALLAASIYSINIPLSKLLLKHVETTMMAGLLYFGAGIGLIILTNIMKFIGISKKQEPL 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K + + + + + + S V + + V KE ++
Sbjct: 69 TKKELPYTIAMVILDIIAPILLMLGISMTNSANVSLLNNFEIVTTSIIALVIFKEIISKK 128
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA---IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
IA L+ ++ +I++ + + + S S IE+ +
Sbjct: 129 LWIAIFLVTIASIILSFEGKGAFVFNKGSLLVLAASTCWGFENNCTKMLSNKDPIEIVTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
F ++ + C++ K +
Sbjct: 189 KGCFSGLGSIIIALIIGEKFPDLTWLFTVMLLGFIAYGLSICLYIIAQKHLGAAKTSAYY 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
AP L + S+ +L + I F I+ IA ++ + T+
Sbjct: 249 SVAPFLGVAFSMLLLHERPTLQFYIAFLIMTIATIIMVKDTI 290
Score = 41.8 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 6/138 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G+L V A WG T+ L +E+++ + +S G + L
Sbjct: 155 KGSLLVLAASTCWGFENNCTKMLSNKDPIEIVTIKGCFSGLGSIIIALIIGEKFPDLT-- 212
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+++ + +I A TS Y V P + V + L ER
Sbjct: 213 ----WLFTVMLLGFIAYGLSICLYIIAQKHLGAAKTSAYYSVAPFLGVAFSMLLLHERPT 268
Query: 145 HLQIIAALLIILSLLIMT 162
IA L++ ++ +IM
Sbjct: 269 LQFYIAFLIMTIATIIMV 286
>gi|224368470|ref|YP_002602633.1| hypothetical protein HRM2_13600 [Desulfobacterium autotrophicum
HRM2]
gi|223691186|gb|ACN14469.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 308
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 81/292 (27%), Gaps = 9/292 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLLKD 83
+ +WG + + ++ V R + ++ G + +
Sbjct: 10 FILLITASIWGFAFVAQRMGMDHVGPFTYNGVRFALGGVSLLPFLLVGLTKKKGRIPVVE 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
P+ + + S IL L+ F + ++ LG ++ +
Sbjct: 70 GPDLPEILRGGILSGLILFCGSSLQQVGLVYTTAGKAGFITGLYVILVPVLGLLWKQRA- 128
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGSSEGFFIE 199
I A++ + L +++ + + I + A + +
Sbjct: 129 GTGTWIGAVMAAVGLYFLSVTEQMTVSFGDVLELIGAVFFALHVIVIGRLSQRIDTVSLS 188
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ++ + G + + YG K + +
Sbjct: 189 FVQCMLCSVVSIAVAFAFETVSLSGIWRGALPIFYGGVFSVGIAYSLQIYGQKDSPPAHA 248
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
I+ ++ + IL + + +++ M+V L T + K
Sbjct: 249 AILLSLESVIAAIGGWLILNEFLSGRALAGCVLMMSGMLVSQLYTYLIPKKK 300
>gi|206972533|ref|ZP_03233477.1| transporter, EamA family [Bacillus cereus AH1134]
gi|206732557|gb|EDZ49735.1| transporter, EamA family [Bacillus cereus AH1134]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+F A ++ Y T S VTP+++ L SVFL E++ I
Sbjct: 72 ---FFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 FSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|53711458|ref|YP_097450.1| hypothetical protein BF0167 [Bacteroides fragilis YCH46]
gi|60679728|ref|YP_209872.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343]
gi|52214323|dbj|BAD46916.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60491162|emb|CAH05910.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343]
Length = 287
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 96/287 (33%), Gaps = 3/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ PL+T E ++ ++ +R L++ + ++
Sbjct: 1 MNKLNGFLYGLLSSASFGLIPLFTIPAMREGMNFESILFYRFLFACLALGCILLLDKQSF 60
Query: 79 SLLKDTLKNPKA-VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + + + SA L + F + T F+ + +I
Sbjct: 61 HIKRKEIPSLMLLAFLYLMSAVFLFWGYKFMASGVATTIHFMYPVLTTLIMMIFFRERKS 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L ++ + + + + L A+ ++ Y + +G +G
Sbjct: 121 TWRFFAIALAVVGVSCLSYGDSSGGITALGLFIVLLSALGYALYLVTVSQLKIGQMKGLR 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ V L + G + G ++ + +K +
Sbjct: 181 LTFYVFLFGTLLLLAGIGTTTGIQTIPDWHTGGNLVLLALIPTVVSNLALVRAVKSIGST 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ P+ + +FI +P I +++ A++V +L
Sbjct: 241 LTSVLGAMEPVTAVCVGIFIFGEPFTQSIGIGILLIISAVIVIILKR 287
>gi|330961646|gb|EGH61906.1| putative DMT superfamily transporter inner membrane protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 84/296 (28%), Gaps = 4/296 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + P ++G Y++WG T L + +E L + R + + + + +
Sbjct: 1 MPQSLRISPLLIGAFLAL--YLIWGSTYLVIRIGVESWPPLMMAGVRFMIAG-CLMYGFL 57
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
F G + K +G L+ + V + T + +
Sbjct: 58 RFRGVPAPTWAEWKAAFVIGFLLLACGNGGVTLAEHAGVASGVTALAVATMPLFTLLFGL 117
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F G+ + + + +L+L S + A A+
Sbjct: 118 FWGNRTTNLEWAGIVLGLIGIGLLNLGSNLQSSPYGAALVIFAAASWAFGSVLSKHMPLP 177
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+L A + L + F + Y +K
Sbjct: 178 KGPMASAAEMLTAGATLLIGSALSGERLTHMPTAAGWGALLYLVVFGSIVAFSAYMYLLK 237
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + Y P + ++ V + I + +++ +V+ LP S
Sbjct: 238 NVRPAAATSYAYVNPAVAVMLGVVFAGEIIGVEECMAMVVIISGVVLIGLPQWRRS 293
>gi|327402136|ref|YP_004342974.1| hypothetical protein Fluta_0126 [Fluviicola taffensis DSM 16823]
gi|327317644|gb|AEA42136.1| protein of unknown function DUF6 transmembrane [Fluviicola
taffensis DSM 16823]
Length = 310
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 98/306 (32%), Gaps = 26/306 (8%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-----------VSVLEVISHRVLWSLPGVFFAIV 72
+ G L++ + I + I + + L E++ R L S I
Sbjct: 2 IKGILYIILSGIAFFIINFFVKMLGNPDNAIIPDLQKYPAHELVFFRSLVSFAISATIIK 61
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
Y L + V F + L + S +++P+ +V
Sbjct: 62 YKGLSLLGNNRRWLLLR--------GIAGMVALTLFFFTLHKLPLAIASTLQYLSPIFTV 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFAR 185
+ S E+++ +Q ++++L L ++ + + L I SA
Sbjct: 114 LIASRLFHEKVSKIQYLSSVLAFLGVVFIGFNGIFNGLENQKLDLVWMILGVVSAILSGV 173
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + ++ + + G F + + + L+ G+L
Sbjct: 174 AYNAISKLKDTEETINIVIYFPMLALPLTGIWCLFDFTFPHGIEWIILLAIGVLTQIAQV 233
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + V +Y + ++S F+ + + T + +V++ +++ +
Sbjct: 234 TMTRAFLSTNTAIVAPFQYIGAIYALISGWFVFNEKLATASILGVCLVLLGVIIGTVFRA 293
Query: 306 INSGKN 311
K
Sbjct: 294 KIKEKK 299
Score = 39.1 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 36/82 (43%)
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+L+ G+ +F + + + L+ ++Y +P+ ++ + + + + ++ +
Sbjct: 74 WLLLRGIAGMVALTLFFFTLHKLPLAIASTLQYLSPIFTVLIASRLFHEKVSKIQYLSSV 133
Query: 292 IVVIAMVVYLLPTVINSGKNKT 313
+ + +V + N +N+
Sbjct: 134 LAFLGVVFIGFNGIFNGLENQK 155
>gi|294648880|ref|ZP_06726336.1| membrane family protein [Acinetobacter haemolyticus ATCC 19194]
gi|292825271|gb|EFF84018.1| membrane family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 306
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 91/293 (31%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++W + T+++ +S + + +R L + + ++ L
Sbjct: 12 FVLPLIAVLIWSLNIAVTRYVADYISPVSISFYRWLVAFLILTPFMLPKIWQQRALI--- 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ + LK+R N
Sbjct: 69 -RPLIPKLAVLSAFGMVLYQGLSYAAAHYTTATNMGIVNAFVPIFTIFISYLILKDRPNR 127
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
I+ ++L LL + G + + Y F + +
Sbjct: 128 FAILGSVLSFAGLLYVMGQGHISSLFMQGGHWGDAVMVLAVGFYAFYGVFLKKWQLKLPL 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ + + ++ ++ +
Sbjct: 188 MTSLYVQIGFALVYHLPFLLWFGLDWINAENAASVIYAGVFPSLIAPLLWMLAVQFIGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I P+ + + F L + ++ ++++ +++ ++ +
Sbjct: 248 RTSIFMNLMPVFTAIIASFWLAESWTIYHSVGGFMILVGIILAQKKSLKLPSR 300
>gi|262374394|ref|ZP_06067669.1| predicted protein [Acinetobacter junii SH205]
gi|262310651|gb|EEY91740.1| predicted protein [Acinetobacter junii SH205]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 93/284 (32%), Gaps = 12/284 (4%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L V + WG + + L +S V R++ + + + +
Sbjct: 3 TQSQWFGALLVIMGAVGWGTLGIASTQLANAGLSNSSVTGLRIVGTFICLLAFLPFLYKV 62
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L+ +++ S + + A+ + + P+ SV L +
Sbjct: 63 LRTLQFQDIPK----LVIQSLLGMLGMTFCYFNAVQHVGPAIAVALLYTAPIWSVVLSFI 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK------TIPVG 191
FLKER+ ++ L+ + + M L ++ + S C+A I
Sbjct: 119 FLKERITLKSMMLTLVAVSGVACMMLGDNQLNMTGVLFGLASGICYAAYGVIGKDIIDHY 178
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S +++ A+F + + ++ F +++YG+
Sbjct: 179 SPTFLLFSSMMVSALAIFPFIHFQEIESLVSNIDFNIVIACILLIVFGTLLPFTLYTYGL 238
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
K K S I PL ++ + + + +++
Sbjct: 239 KYLKASQASIYTIFEPLTAVILASLFANVQLSNAQIFGVILIIS 282
>gi|226311140|ref|YP_002771034.1| hypothetical protein BBR47_15530 [Brevibacillus brevis NBRC 100599]
gi|226094088|dbj|BAH42530.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 94/295 (31%), Gaps = 12/295 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ L + WG ++ + L + S L + + R+L+ + + L +
Sbjct: 2 LRSYLLLIFCVTAWGSNFVFGKMLVAEFSPLFLSAMRLLFIVLFLLIWSRGRLKMPKLSR 61
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ V + ++ F L+T ++ +TP+ + L ++FLKE
Sbjct: 62 TDWL-----LLAVLGVVGVFINQWSFYKGLVTADPTTSALILALTPITTALLAALFLKES 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG------F 196
L I +++ ++ + + I +I + G
Sbjct: 117 LTGRMAIGSVIGTSGVIFVIYTGAELHFDVGILWIVLTMLTFATSIILVRLLGHRLPPLV 176
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ L L + +++ V I++ +++
Sbjct: 177 TTLVSNLIGFGSLLPFVLISIPTAMVSTSLSSWLLLFVTGVVMHGIVTLIWNSQLQKVGA 236
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + P + ++ + +L +P+ V+ +++ + + KN
Sbjct: 237 AKAAMFANLEPFIAMLFGLLLLAKPVTGVQFFGAILIIAGVTLTTTSKEPRKKKN 291
>gi|169830635|ref|YP_001716617.1| hypothetical protein Daud_0439 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637479|gb|ACA58985.1| protein of unknown function DUF6, transmembrane [Candidatus
Desulforudis audaxviator MP104C]
Length = 325
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 83/299 (27%), Gaps = 7/299 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL----EQVSVLEVISHRVLWSLPGVFFAI 71
+ L + Y++WG T L + + + RVL + +
Sbjct: 11 SNPTGRESWSAYLDLLVVYVVWGSTYLAIRVAVGEGGGFPPFIMGAMRVLLAGVLLLLWA 70
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
L K+ L G+L+++ V W + S +V +++
Sbjct: 71 GLTRSRLRPTKEELLVLAVSGILLWTGGNGLVMWAEQRADSAYAALLVGSTPIWVAVMMA 130
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
L I A L++L+ ++ + L++ + I
Sbjct: 131 FLDRRPPSWLLAGSLLIGFAGLVLLTAPVLATGTRADTLAVIALLAAPVSWGIGSLIQNR 190
Query: 192 SSEGFFI---EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
G + ++V + + F F
Sbjct: 191 RPVGMSVIASSAYQHLFGGAGFLVLVLIFNEPLPNPTPAAWWAWGYLVVFGSLLAFTSFV 250
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ + V Y P++ ++ IL + I ++++ + +N
Sbjct: 251 RALRSLPTNIVMTYAYVNPVIAMILGRLILNEAITAWTVGGAALILLGVAGVFRDRYVN 309
>gi|196038060|ref|ZP_03105370.1| transporter, EamA family [Bacillus cereus NVH0597-99]
gi|196031330|gb|EDX69927.1| transporter, EamA family [Bacillus cereus NVH0597-99]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/299 (10%), Positives = 91/299 (30%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIP 189
+ER + I +++ + + L + A +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I + V++ F+ + + F ++
Sbjct: 176 ISKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTLSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 294
>gi|29346807|ref|NP_810310.1| hypothetical protein BT_1397 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338704|gb|AAO76504.1| putative membrane protein [Bacteroides thetaiotaomicron VPI-5482]
Length = 315
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/302 (8%), Positives = 90/302 (29%), Gaps = 14/302 (4%)
Query: 14 LSKENASLPTMMGTLFV-FCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAI 71
+ +N S + G + F Y++WG T + L+ S + + R + +
Sbjct: 1 MKSQNPSKRNLPGVIIAYFLIYVVWGSTYFFIGVALKDFSPFLLGALRFTTAGLILLGIC 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ ++ + +L+F + + ++ + L ++ + + +
Sbjct: 61 YLRGEQIFKKSLVKRSAVSGIVLLFVDMAVVMLAQRYLTSSLVAIIASSTALWILLLDVP 120
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
++ + + I +++L + P I +
Sbjct: 121 MWRTNFRNPLTIAGGGIGFGGVVMLYAEQLNAEWLHPQSERGILLLVFGCISWALGTLYA 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGG------------EHFFLGNIPDTLFLIGYGLL 239
E + + +++ + + L
Sbjct: 181 KYRSSREEEVNAFAGSAWQMLFASVMFWICAVVNGDVREADLSTVSVTSWFSLLYLISFG 240
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + + +K + VG Y P + ++ V + + V+ ++++ +++
Sbjct: 241 SLLAYSAYVWLLKVRPAAEVGTHAYVNPFIAVLLGVSFGNEQVTFVQLSGLLVILLGVML 300
Query: 300 YL 301
Sbjct: 301 IS 302
>gi|51245190|ref|YP_065074.1| hypothetical protein DP1338 [Desulfotalea psychrophila LSv54]
gi|50876227|emb|CAG36067.1| conserved hypothetical membrane protein [Desulfotalea psychrophila
LSv54]
Length = 302
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/296 (14%), Positives = 84/296 (28%), Gaps = 19/296 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G L + A +L + ++ L VS E+ R +F
Sbjct: 4 RKSQQKGLLIMIAAALLLPVIDAISKVLTAYVSPGEIALVRFSLQGALLFPFAYRELKIP 63
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + AV FI A+ +F P++ +V
Sbjct: 64 KL--------PLLATHFLRGILNAVASLCFIAAITQMPLADAIAIFFAEPLLLTLFSAVL 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS------ 192
LKE++ +I A L+ L + S + AI +A FA I
Sbjct: 116 LKEKIGIARITACLIGFAGALFIIGPSFTNFGATAILPFLTATFFALYLIVTRKQSKRGE 175
Query: 193 ----SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + L + + + L +G G + + +
Sbjct: 176 SVNAMQFYASMGATLFLLPITLLGDAFSLPLFELSWPTTEVALLFLGVGASSLISHQLLT 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+A + + +Y + + + Q + GI++ + +
Sbjct: 236 IAFTKADANVLAPFQYLEIVSATILGWLLFGQFPGAQTLLGAGIIIASGMFIFYRE 291
>gi|15603955|ref|NP_220470.1| hypothetical protein RP076 [Rickettsia prowazekii str. Madrid E]
gi|81554923|sp|Q9ZE70|SAM_RICPR RecName: Full=S-adenosylmethionine uptake transporter
gi|3860646|emb|CAA14547.1| unknown [Rickettsia prowazekii]
gi|292571673|gb|ADE29588.1| S-adenosylmethionine transporter [Rickettsia prowazekii Rp22]
Length = 294
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 92/294 (31%), Gaps = 8/294 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+A + G + + + I + +++L + EV R +S + +VY+
Sbjct: 1 MNDALKTYLNGICWFLLSLVTSSINDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ V +L + Y L + F P+ ++ L
Sbjct: 61 GKN-------ALKTSRPFVHVLRGLLLFFGMTSWTYGLTIAPVTTATVVSFAIPLFTLIL 113
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L E + + + ++ + L++M + + +A FA I
Sbjct: 114 AVFILNENIIWQRWVVTVVGFIGLVVMLKPHTKDFNPEILYLILAAISFAMLDIINKKFV 173
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +L A+ + + +++ + + L G SF+
Sbjct: 174 VKESMLSMLFYSAIVTAMVSLPVAMQYWITPSSFELALLFVLGSSGSFILFFLLKAFSIV 233
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ Y ++ +++ FI + D I++ A + + +
Sbjct: 234 DATATAPYRYLELVISAIAAYFIFNEFPDKSTVHGAVIIIPATLFIIYSEKKSM 287
>gi|321311525|ref|YP_004203812.1| cysteine and O-acetyl serine efflux permease [Bacillus subtilis
BSn5]
gi|320017799|gb|ADV92785.1| cysteine and O-acetyl serine efflux permease [Bacillus subtilis
BSn5]
Length = 292
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 84/287 (29%), Gaps = 5/287 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + ++WG T + + + + L R+ +F + L++ K+ L
Sbjct: 5 MLGIISVTLIWGYTWVAMKVGIHDIPPLLFSGLRLFIGAVPLFLILFIQRKKLTIQKEHL 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER--- 142
K+ + +L+ + + +G + + FVT + L +
Sbjct: 65 KSYIIMSLLMGLGYMGILTYGMQFVDSGKTSVLVYTMPIFVTVISHFTLNEKMNVYKTMG 124
Query: 143 -LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L + + L I L LA A++W K
Sbjct: 125 LVCGLFGLLFIFGKEMLNIDQSALFGELCVLAAALSWGIANVFSKLQFKHIDIIHMNAWH 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ + V F L L F F ++ + + + + S +
Sbjct: 185 LMMGAVMLLVFSFIFEPVPSAEWTYQAVWSLLFNGLLSTGFTFVVWFWVLNQIQASKASM 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+L + L + I + ++ + +
Sbjct: 245 ALMFVPVLALFFGWLQLHEQITINIILGALLICCGIFMNTFTFSRRK 291
>gi|307941701|ref|ZP_07657056.1| transporter, DME family [Roseibium sp. TrichSKD4]
gi|307775309|gb|EFO34515.1| transporter, DME family [Roseibium sp. TrichSKD4]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 91/305 (29%), Gaps = 16/305 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIV 72
++ + + A ++ + + ++L + LE+ R L A +
Sbjct: 1 MTSGPIEQNNLAAIGLMSSAMLIVPLMDIIAKYLSASLPPLEITFARFFAQLILAGLAAL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
LL + + IL++ FF A+ +FV P+I
Sbjct: 61 VLGHRSKLL------GNRPVVNLLRGAILSLAVLFFFTAVKYMSVATAISIFFVEPMILT 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCF 183
L +FLKE++ +I A ++ + LI+ S +++ A+ F
Sbjct: 115 VLAVIFLKEKIGIRRIGAIIVGLTGALIILRPSLAETGLVSLLPLATATLFAIYLLMNRF 174
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + + + F + + G+ +
Sbjct: 175 YASADGLVPIQFSAGLAGSVILGFALVTTTALDVPEATFIMPESWQFGLIALMGVFSYLG 234
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ +R + + ++Y + + + D I G++V +
Sbjct: 235 HGLVVLAFQRGEAGLLAPLQYLEIVGATLFGYLVFADFPDGPTWIGIGLIVFGGLYIAQR 294
Query: 304 TVINS 308
S
Sbjct: 295 ERAQS 299
>gi|253564480|ref|ZP_04841937.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265764857|ref|ZP_06093132.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|251948256|gb|EES88538.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263254241|gb|EEZ25675.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301161190|emb|CBW20728.1| putative transmembrane protein [Bacteroides fragilis 638R]
Length = 287
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 96/287 (33%), Gaps = 3/287 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ PL+T E ++ ++ +R L++ + ++
Sbjct: 1 MNKLNGFLYGLLSSASFGLIPLFTIPAMREGMNFESILFYRFLFACLALGCILLLDKQSF 60
Query: 79 SLLKDTLKNPKA-VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + + + SA L + F + T F+ + +I
Sbjct: 61 HIKRKEIPSLMLLAFLYLMSAVFLFWGYKFMASGVATTIHFMYPVLTTLIMMIFFRERKS 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L ++ + + + + L A+ ++ Y + +G +G
Sbjct: 121 TWRFFAIALAVVGVSCLSYGDSSGGITALGLFIVLLSALGYALYLVTVSQLKIGQMKGLR 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ V L + G + G ++ + +K +
Sbjct: 181 LTFYVFLFGTLLLLAGIGATTGIQTIPDWHTGGNLVLLALIPTVVSNLALVRAVKSIGST 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ P+ + +FI +P I +++ A++V +L
Sbjct: 241 LTSVLGAMEPVTAVCVGIFIFGEPFTQSIGIGILLIISAVIVIILKR 287
>gi|253751227|ref|YP_003024368.1| hypothetical protein SSUSC84_0318 [Streptococcus suis SC84]
gi|253753128|ref|YP_003026268.1| membrane protein [Streptococcus suis P1/7]
gi|253754951|ref|YP_003028091.1| membrane protein [Streptococcus suis BM407]
gi|251815516|emb|CAZ51096.1| putative membrane protein [Streptococcus suis SC84]
gi|251817415|emb|CAZ55153.1| putative membrane protein [Streptococcus suis BM407]
gi|251819373|emb|CAR44781.1| putative membrane protein [Streptococcus suis P1/7]
gi|319757502|gb|ADV69444.1| DMT family permease [Streptococcus suis JS14]
Length = 302
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 99/278 (35%), Gaps = 10/278 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+GTL A I WG++ + Q+L VSV + S R+L S + +
Sbjct: 3 EKRLGTLITVIAGIAWGLSGVSGQYLMSRGVSVDMITSLRLLVSGLFLVGLAYATAKEQL 62
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L KN +G+ +F+ L ++ ++ A+ + ++ P++ + +
Sbjct: 63 LAVLKDKN-ALLGIFIFAMLGLVLNQTAYLQAIYHTNAGTATVLQYLCPILVLAYTCLKN 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
+E+ + +++I+ +L I ++ H L I ++ + +
Sbjct: 122 REKPSGIELISIILAIAGTFLIATHGKLDELAVTPIGLFWGIFSAFTYALYIILPGKLIR 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + + F V + + L G+ F + F G+
Sbjct: 182 QYGSITVIGLGMLMGGFVVTLGLQTWQHRLPIDGGSFLGLLGIVGVGTIFAYTAFLKGVS 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
++ P+ + +V+++ + + +
Sbjct: 242 MVGPVNGSLLASIEPIASVFFAVWLVNEQFYAIDFVGM 279
>gi|124516540|gb|EAY58048.1| conserved hypothetical protein [Leptospirillum rubarum]
Length = 320
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 92/291 (31%), Gaps = 8/291 (2%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ CA L+G++ +++ L V + + + SL G+ ++ G L +
Sbjct: 17 VWSLCAAFLFGLSTPFSKPLTALVPPVWLATLFYGGSLFGILPGLIPRMGLLPESRKEFW 76
Query: 87 ------NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + + I L S + +V + ++
Sbjct: 77 LAGETTPKEKSALFASIVLGGVLAPLALIKGLTNYPASRGSLLMNAESLFTVLIATLLFG 136
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E++N + +L+ +++ + +A+ +A T + + +
Sbjct: 137 EKINRWMLAGVVLVSTGCGVLSFTETKNSYQGSEFFFLAAFLWALDTNILRALSRLNPLV 196
Query: 201 CVLA-IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L +++ F L+ + F +F I+ +
Sbjct: 197 VTLWKGAGSTLLLFPLAMRSGPFSGSPETILESLLVGAIGYGFSLVVFLRSIRTIGVVRT 256
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G +P + SV L +P+ + G++ +A+ + +
Sbjct: 257 GAWFGFSPFIGAALSVIFLGEPVSITFVLSAGLLFLAIYILHKGEQQREKR 307
>gi|89893951|ref|YP_517438.1| hypothetical protein DSY1205 [Desulfitobacterium hafniense Y51]
gi|219668326|ref|YP_002458761.1| hypothetical protein Dhaf_2294 [Desulfitobacterium hafniense DCB-2]
gi|89333399|dbj|BAE82994.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538586|gb|ACL20325.1| protein of unknown function DUF6 transmembrane [Desulfitobacterium
hafniense DCB-2]
Length = 350
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 83/287 (28%), Gaps = 4/287 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ F A +L+GI+ ++ L ++ + + L + G+ ++
Sbjct: 1 MTSKKTSAIFFAILAALLFGISSPVSKLLLTKIPPTMMAALLYLGAGLGMCVVRLFNHRQ 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ +K+ K ++ + F + L S V + + +
Sbjct: 61 GTEVKEARITQKDFPYVLAMIILDIAAPVFLMVGLTLSSAAHASLLGNFEIVATSLIALL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+E + A LI L+ +I++ L S L + +
Sbjct: 121 IFQESIGKRLWAALALITLASIILSVEDLSSFTFSLGSLFVLLSCICWGFENNCTRKLAI 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+++ +L + G L+ + + +
Sbjct: 181 KDPMDIVILKGFGSGLGALFLALFLKETLSGIGYILGALMLGFVAYGLSIFFYVRAQREL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ AP + + S I ++ + + GI++ +
Sbjct: 241 GAARTSAYYALAPFIGVGLSFAIFREMPNASFLVALGIMIAGAYLAS 287
Score = 36.4 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 4/61 (6%), Positives = 22/61 (36%)
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G+ + + ++ + + ++ I ++ I ++ +A ++ +
Sbjct: 89 VFLMVGLTLSSAAHASLLGNFEIVATSLIALLIFQESIGKRLWAALALITLASIILSVED 148
Query: 305 V 305
+
Sbjct: 149 L 149
>gi|318606509|emb|CBY28007.1| permease of the drug/metabolite transporter (DMT) superfamily
[Yersinia enterocolitica subsp. palearctica Y11]
Length = 295
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 93/293 (31%), Gaps = 13/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A I+W I + ++ + + +R + +L + ++ +
Sbjct: 5 VLFPLFAVIIWSINAVVSKVSATAIDPAAISFYRWVLALLTLTPFLL----MGVIRNWQA 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + ++ YA + + P+++V + V L+
Sbjct: 61 IRVYWWKLMILGLLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVVLRVAPTI 120
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L + L+ + GI L + ++Y + +
Sbjct: 121 GIALGSVLSLGGLVWLVSAGNPAQLLQHGIGKGELMMFGASASYALYGVLTKRWAIQLPN 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F L L L + ++ +G+ R +
Sbjct: 181 WQSLYIQIVFGVVLLLPNFLLAADVQLTAQNIPLVLFAGIPASIIAPYLWIHGVMRLGAN 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
T I P+ + +V L + + + I GI + +++ K
Sbjct: 241 TASIFMNLTPVFTAIIAVTFLHEQLHSYHLIGGGITLAGVILAQRLRTPLRRK 293
>gi|313901667|ref|ZP_07835100.1| protein of unknown function DUF6 transmembrane [Thermaerobacter
subterraneus DSM 13965]
gi|313468067|gb|EFR63548.1| protein of unknown function DUF6 transmembrane [Thermaerobacter
subterraneus DSM 13965]
Length = 374
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 82/287 (28%), Gaps = 18/287 (6%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
+ + ++ Q + +R+ + + + P+ + V S
Sbjct: 60 SFSSVLIRY-SQAPSAVIAFYRMALTTLLLLPWA-----WRDAGRVRRLPPRLLWASVLS 113
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
+LA H+ +I +L + P+ + + L+ER+ +++ ALL +
Sbjct: 114 GVLLAGHFLTWIASLRYTSVTASVLLVTSHPLYVMAADAWLLRERVPARRLLGALLALTG 173
Query: 158 LLIMTLHSG------------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ ++T + A V +
Sbjct: 174 VAVVTFAGAGAGDLAAGGTALYGNFLAVAGSWFFAGYILIGRRVRQVLPVMPYTTLVYGV 233
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+L +G LF+ + + ++ ++ S V +
Sbjct: 234 ASLVIAAGLALTGTPFGPYPWREMLLFVALAVVPTLGGHTVLNWALEWVPASVVSVSILG 293
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
P+ + + +L + V + + + V + + +
Sbjct: 294 EPVGASLLAWLLLGEAPSGVELAGGALTLAGLFVATQTAGRETERLR 340
>gi|294085607|ref|YP_003552367.1| integral membrane protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665182|gb|ADE40283.1| integral membrane protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 85/280 (30%), Gaps = 8/280 (2%)
Query: 37 WGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
+ + ++ + Q + V+EV+ R + I+ + +
Sbjct: 24 FTVMGVFIRLSSQTIPVMEVVFFRNFLGALCLLPLILRSG-------IKTIKMVRPRLFI 76
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ + + A+ + F P+ ++FL E + +IIA ++
Sbjct: 77 YRGIVNFIGMAAGFTAVTLIPLAEVTALNFTCPLFITLGAAMFLGEIIRIRRIIAIIIGF 136
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
L++ + A+ + C A ++ V ++ + +
Sbjct: 137 FGALLILQPGISEVSLGAMLALVGSLCIAGASLLVKKMTETESVNAIVLWMVVIQAPISF 196
Query: 216 FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSV 275
+ ++ + LI L + F+ +++++ +E+ V +
Sbjct: 197 VPAYFVWQWPDMEGWVLLICLTLAATIAHICFTRACGLVEITSLQHLEFVKLPFAAVVAW 256
Query: 276 FILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
FI + D I ++ ++ +
Sbjct: 257 FIFSEVPDIWTWIGGAVIFLSTAYITHREARADKSMRPNH 296
>gi|223042098|ref|ZP_03612272.1| hypothetical protein AM202_0687 [Actinobacillus minor 202]
gi|223017110|gb|EEF15548.1| hypothetical protein AM202_0687 [Actinobacillus minor 202]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 117/287 (40%), Gaps = 6/287 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---GLSL 80
M+G A +L+G +L + E+ R+L +LP +F A+ ++
Sbjct: 1 MLGVFCSLLASLLFGGLYYLATWLRPLEGQEIFGFRMLVTLPFLFLAVFVLKKQAEFIAF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK + P + +L+F+A + + F++A + + S Y + P++ V G K
Sbjct: 61 LKRIRQEPYLILVLIFTAFFVGLQMWLFLWAPNSGRAIEVSIGYLLMPIMMVIAGKWIYK 120
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ + IA +L + +L + +G + A+ +T + F + + FI
Sbjct: 121 EYLSVWKWIAIILAGIGVLSNVIQTGAFSWASALVLTGFPFYFMVRRKFNIAHIHSFI-- 178
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ I + + + N L GLL+ ++ + +G
Sbjct: 179 LEVTILIPAALYFISPVDLKQIETVNEHIYFALFLLGLLSGVALISYTMASYLVPFNVLG 238
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ Y P+ M+ S FI + + I+ + A++ ++ ++N
Sbjct: 239 LLGYLEPVAMMAISFFI-GETLKPESYILLICLSFAILFLIIDGILN 284
>gi|254456135|ref|ZP_05069564.1| hypothetical transport protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083137|gb|EDZ60563.1| hypothetical transport protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 298
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/289 (9%), Positives = 72/289 (24%), Gaps = 10/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ A + W + + E V + R + + +
Sbjct: 2 NKNTKAYTMLILATLFWAGNFTIGKFAYTENVPPYSLAFFRWILVWIILLPFTFKEIPKI 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ A + Y + + ++ L
Sbjct: 62 KTEVKNNLPLFFILGFTSVGIFSAFTYNALNYTQVINASLFNTAIPVSIILVCFLLKIEK 121
Query: 139 LKERLNHLQIIAALLIILSLL--------IMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
I++ L I+ + + + G + +AI F +K
Sbjct: 122 TNIYQISGLIVSVLGILAIITRLDLNILLTLNFNKGDIYMIIAIISWGIYSAFLKKKTFD 181
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
S +C + L + G+ L + + L + + ++
Sbjct: 182 ISLLSLVHVVCTFGLIILLPAFLFELAQGKTTELNSNLIFILLYIAIFPSIGSYYCWAGA 241
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + GI PL + ++ + I ++++ + +
Sbjct: 242 VSIIGANRAGIFLSLIPLFSTIFAMIFFNEKFLFFHFIGSVLIILGLFL 290
>gi|170744605|ref|YP_001773260.1| hypothetical protein M446_6570 [Methylobacterium sp. 4-46]
gi|168198879|gb|ACA20826.1| protein of unknown function DUF6 transmembrane [Methylobacterium
sp. 4-46]
Length = 316
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 85/293 (29%), Gaps = 16/293 (5%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ +LWG + + + L+ + L V++ R+ + + + + T
Sbjct: 16 LILLLSVLWGGSFFFVRVALDALPPLTVVALRLALAALILNALAPLLGARMPRDRATWAA 75
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+G+L + + WG A + V + ER+ +
Sbjct: 76 FLGMGILNNAIPFCLIAWGQTQIASGLAALLNATTPLTT----VVVAHFLTRDERMTGRR 131
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFI 198
+ L + + +M + + L A +++ +
Sbjct: 132 LAGVGLGLAGVAVMVGPAVLGGLGAAALAQGAVLAAAWSYALAGVYGRRFGRMGLPPLVT 191
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIP--DTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ AL P L L + + IF + RA
Sbjct: 192 AAGQVTCSALLLGPLALALNRPWTLPPPGPGAWGAVLGLACLSTALAYLIFFRILARAGA 251
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + ++ + P+ I V +L + +D + G++ + +
Sbjct: 252 TNIALVTFLIPVSAIGLGVLVLGERLDARQIAGMGLIGAGLAAIDGRLLDRLR 304
>gi|89092660|ref|ZP_01165613.1| transporter, drug/metabolite exporter family protein
[Oceanospirillum sp. MED92]
gi|89083172|gb|EAR62391.1| transporter, drug/metabolite exporter family protein
[Oceanospirillum sp. MED92]
Length = 300
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 90/293 (30%), Gaps = 9/293 (3%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + L+ + ++ V RVL + ++ A V+F L + ++
Sbjct: 9 LLLLAAIWGASFLFMRIAAPELGAALVAEIRVLLAAMFLWAASVFFKRSLRVGENW--RH 66
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ SA + + + L + + VI+ L + + +
Sbjct: 67 YLIVGFFNSALPFILFSYAALQLSASILSILNATAPLWGCVIAAALDRQRIPVKTFSGLV 126
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS------SEGFFIEMCV 202
+ + + + L T +A +A+C+ + M
Sbjct: 127 LGVIGVGVLLGFDTAVVSEAGWLPCLAAIGAAFCYGIASNYTRRAKADDAFSNAHGTMWS 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ L V+ + + + ++ IK ++ +
Sbjct: 187 STLILLPMVILFSSTEQVTVITEGAVLMSVTALGVICTGIAYLLYFRLIKDVGAASALTV 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ P+ ++ L + + IVVI ++ + N KN++
Sbjct: 247 TFLIPVFGVLWGGLFLNENMGWHTFCGGVIVVIGTMLVTGFSPKNLFKNRSAH 299
>gi|88797747|ref|ZP_01113335.1| ABC transporter, membrane spanning protein [Reinekea sp. MED297]
gi|88779424|gb|EAR10611.1| ABC transporter, membrane spanning protein [Reinekea sp. MED297]
Length = 300
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 84/289 (29%), Gaps = 8/289 (2%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F +WG + +F LE + V + R+ + + L L
Sbjct: 9 YALLFFQGAIWGSSFQAIKFALEGFGPMTVAAGRIGLAAVMMLLYARARGHRLPRNGRVL 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
VG+ + + WG F+ + + L
Sbjct: 69 GMLAIVGLFNCAIPFFLIPWGEQSLDSGRTAIFMATGPLIALAIAHFTTTDERLNRFKLL 128
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++ + ++L + + + +G +A+ +A +A + +
Sbjct: 129 GFVMGFVGVLLVIGLDSFSAGAAEWLPQLAIIGAATSYAISGAIAKRVLNVSSSVFTACV 188
Query: 206 PALFYVVWNGFSGGEHFFLGNI-------PDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ ++ S + ++ P + + F I + IK +
Sbjct: 189 LSSAALMTLPASLILETPVTDLAATGLSRPLLALIYLGLIPTGLAFLIRFHLIKTVGYTF 248
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V + Y P+ ++ I ++ I +++ + V L
Sbjct: 249 VSQVGYLVPVFGVLFGALIFQEAITANIVTGLCLILTGIFVSRLSARHR 297
>gi|326940807|gb|AEA16703.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 89/292 (30%), Gaps = 17/292 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFMMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIP 189
+ER + I +++ + + L + A +
Sbjct: 116 QERFSMKVQIGSIVAFVGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFL-GNIPDTLFLIGYGLLNSFVFCIFS 248
+ + I + VV+ F+ + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVVYCLFNVNTLTWPVDMPSWGSLAYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V
Sbjct: 236 VGISKIGSTKVMVYMYLVPLFAVIFAAVTIGEQINIMQLVGGLIIFIGLYVV 287
>gi|312870057|ref|ZP_07730194.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
gi|311094454|gb|EFQ52761.1| putative membrane protein [Lactobacillus oris PB013-T2-3]
Length = 306
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 89/298 (29%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L LWGI+ Q+L +S +++ R L + +
Sbjct: 2 KKQSKGILLAAGGASLWGISGAAAQYLFSTTNISNTWLVALR-LLAAGVLLTLWSAIKFP 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + +F+ +A + A+ + ++ PV + ++
Sbjct: 61 GESRQLVANKTNRRLLFLFAILGMANSQLSYFLAIKYSNAPTATVIQYLQPVFIILWLAL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + + + +L + + LSL + A
Sbjct: 121 AKHQWPRRIDCFSIAIALLGTFFLATGGRLDQLSLTPVALFWGIWCAAAAALYTLLPRPL 180
Query: 198 IE------MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ +C LA+ ++ L + L F + +F I
Sbjct: 181 LQRFDALIVCGLAMLISGLLLSPALVIIPAPRLNLLDWLLVAYIVIGGMMFSYTLFLQSI 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + GI+ PL+ + +V +L + +++ ++ +P +
Sbjct: 241 RYISPAATGILSAFEPLVATILAVGLLGTQLTWAAVSGSLLILFTTILQAVPFRQVAR 298
>gi|302339578|ref|YP_003804784.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
gi|301636763|gb|ADK82190.1| protein of unknown function DUF6 transmembrane [Spirochaeta
smaragdinae DSM 11293]
Length = 296
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 95/302 (31%), Gaps = 13/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S + L + A +L ++ + L V + R L + +
Sbjct: 2 SSRSQFIPLLSIIGATMLMASAGVFIK-LAAVPAPLMSWFRTAVPLVALTIFYLLSG--- 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K +++ + + AV L + PV + G++F
Sbjct: 58 -----HRRLGKPSALILLGSFLNAVRLLLLFAGYLFTSVSNGIMILYSWPVFATLFGALF 112
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC----FARKTIPVGSSE 194
LKER+ LL + I+ SG + S ++ I ++
Sbjct: 113 LKERIPLRNRFLLLLAFAGIGIVYSQSGFEIESRDFIGMSMLLISSALYSLTVIVFKAAS 172
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ ++ L + + F + L+ F +F +K
Sbjct: 173 VRYDQIATTFYQNLIPALLFTPALFFWPFPTGASLAYASLYAVLIGLVAFLLFFTALKHL 232
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S + Y + SV +L + + + + +++++++ G+++
Sbjct: 233 PASVTAHLSYLEVFGALALSVLVLGETLSWNKLVGGAMILLSVLFVSRGNQNKGGEDQKT 292
Query: 315 KS 316
++
Sbjct: 293 EA 294
>gi|260887217|ref|ZP_05898480.1| transporter, EamA family [Selenomonas sputigena ATCC 35185]
gi|330839021|ref|YP_004413601.1| protein of unknown function DUF6 transmembrane [Selenomonas
sputigena ATCC 35185]
gi|260863279|gb|EEX77779.1| transporter, EamA family [Selenomonas sputigena ATCC 35185]
gi|329746785|gb|AEC00142.1| protein of unknown function DUF6 transmembrane [Selenomonas
sputigena ATCC 35185]
Length = 293
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 96/290 (33%), Gaps = 11/290 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
P+ G V +LWG + + QFL + S ++ R+ + + +
Sbjct: 2 NPSKKGVALVALGALLWGGSGVAAQFLLQQKGFSTEWLVMMRMTLAGILLLLLDAAKNRE 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
S+ A +L FS + + ++ S ++ P+I V ++
Sbjct: 62 -SIFSVWRNRTAAKRLLFFSLFGMLGVQYTYFSSIEHGNAAAASVLQYLMPIIVVLWLTL 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPV 190
+ + + LL + ++ L +A + A + + +
Sbjct: 121 KSRSLPSLRESGCVLLAFVGTFLILTRGSLSTLAIPPIALFWGVASAFCAAIYTIQPKWL 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + F ++ L +F+ F +
Sbjct: 181 LDNFRSPLIIGWAMLLGGFLLMPFRAPWNFAGVLDAASVAVFIYVVLFGTVIAFWSYLES 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+K + ST+GI+ PL ++ S +L P ++ +++ ++ +
Sbjct: 241 LKYIQPSTIGILSSIEPLSAVLLSTALLAVPFGLTESVGVVLILFSIALL 290
>gi|229488972|ref|ZP_04382838.1| integral membrane protein [Rhodococcus erythropolis SK121]
gi|229324476|gb|EEN90231.1| integral membrane protein [Rhodococcus erythropolis SK121]
Length = 315
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/296 (8%), Positives = 83/296 (28%), Gaps = 21/296 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G +F + +G++ + + L S + RV + V
Sbjct: 1 MNSRNGLIFALLSAATFGVSGPFAKSLIESGWSPGGAVFARVAGGALVMMVIAVAT---- 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L++ ++ F A+ + ++ P+I + +
Sbjct: 57 QWPRLRQVSTHTRTVLLYGVFAISGVQLCFFNAVQHLSVGVALLLEYLAPIIVIGWVWIT 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE---- 194
R + ++ A + ++ ++ G +S A V S
Sbjct: 117 KGARPSVQTLLGAAVALIGAAVVIDVFGSAEISAVGVAWGLAAAACLAVYFVISERADGD 176
Query: 195 -----------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + S ++ +
Sbjct: 177 LHPVVLAASGLTVSAVVIGALGLVGVLPLQFSASNAVVADHSVNVWLPVVVLVLVSTVIA 236
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I + ++ T L +V++ ++ + + ++ + ++ +V+
Sbjct: 237 YLTGIAAITLLGPTIGSLVALTEVLCAVVAAWILVGESVTALQAVGGAAIIAGLVL 292
>gi|218230976|ref|YP_002367402.1| transporter, EamA family [Bacillus cereus B4264]
gi|218158933|gb|ACK58925.1| transporter, EamA family [Bacillus cereus B4264]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ SVFL E++ I
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAIFASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 FSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|92115207|ref|YP_575135.1| hypothetical protein Csal_3092 [Chromohalobacter salexigens DSM
3043]
gi|91798297|gb|ABE60436.1| protein of unknown function DUF6, transmembrane [Chromohalobacter
salexigens DSM 3043]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 86/299 (28%), Gaps = 3/299 (1%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYF 74
N + + G + + IL+ + + + QV + + + R ++L + + +
Sbjct: 1 MNNVADRPLAGIVLRLLSGILFTGMMVCVKAVSTQVPLGQTVFFRSAFALLPIVIFMTWR 60
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L + P + + L + L + V + L
Sbjct: 61 REFPRALAT--RKPLGHLVRSGLGAAAMFASFAAVARLPVAEATLLAQLSPVAMAVGGVL 118
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L + +L++ L + +A A + V
Sbjct: 119 LLGERFTLHRAAAFALVLAGVAALVVPDLGESRGQVLGYGLGVLAALLTAGALVTVRRIS 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + + + P L+ GL + ++ A
Sbjct: 179 RTETAASIAFYFVLVTALAGLATLPLGWVAVSGPTLALLVLAGLFGGAAHICMTLALRYA 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
++S + EY A + +++ + I P+ + +V+ + L +
Sbjct: 239 EVSRLAPFEYVALIWPVLADLLIFGLPLSGGFLVALPLVLGGAALAALEGRRLRRPLRQ 297
>gi|88802027|ref|ZP_01117555.1| putative permease [Polaribacter irgensii 23-P]
gi|88782685|gb|EAR13862.1| putative permease [Polaribacter irgensii 23-P]
Length = 289
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 101/279 (36%), Gaps = 9/279 (3%)
Query: 33 AYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
A + + + +++ + V +I R ++ +F G + ++K+ K
Sbjct: 15 ATLFISTSGVLGKYIA-MPVEVIIWFRASLAMVFLFVY-----GKFKKIDFSIKSTKDYK 68
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
S ++ VHW + YAL L S + P++ L +FLK + + + I+ L
Sbjct: 69 PFFISGVLMTVHWITYFYALKLSNVALGVLSLYTFPIMVALLEPLFLKVKFSPIYILLGL 128
Query: 153 LIILSLLIMTLHSGIPLLSLAI---AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
+++ L ++T I V + R I + +L +
Sbjct: 129 MVLAGLYVLTPEFNIESAQAKGILFGVFSAFCYAIRILILKQYVARYNGTTLMLYQTIII 188
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
V+ ++ L + + + +K +T I+ P+
Sbjct: 189 TVLLLPTLFFMDLSGLKSQFAYLILLALLTTAIGHSLMLHSLKFFSATTTSIISSLQPVF 248
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I + F++ + I G++++ +V+ + + +S
Sbjct: 249 GICIAYFLVNEIPSLKTYIGGGLIILTVVIESIRSKKSS 287
>gi|325168697|ref|YP_004280487.1| hypothetical protein AGROH133_14818 [Agrobacterium sp. H13-3]
gi|325064420|gb|ADY68109.1| hypothetical protein AGROH133_14818 [Agrobacterium sp. H13-3]
Length = 300
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 96/286 (33%), Gaps = 8/286 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G ++ + + + ++ +S+ +V+ R L L + + K
Sbjct: 18 QGLGWMALSMASFISMAVGSRELASTLSIRQVLFFRALVGLGVILLVGRSLLPQIRQKKL 77
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
++ + F+ +++ F P+ F +FLKE+L
Sbjct: 78 FPRHLARNVVH-------FTAQYFWTIGVVSLPLASVFALEFTMPIWVAFFAWLFLKEQL 130
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+++A L + +L++ + A V +A + I V ++
Sbjct: 131 TGPRLLATLGGFIGVLVIVRPGFGVIDPAAGLVLLAAAGYGLSLILVKQLTKECSPAIIV 190
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L + + + ++ D +++ G+ + +KR S + ++
Sbjct: 191 VWMILIQLPLGLLAALTDWRDVSLSDIPWMMVAGVGALSAHYCQAQALKRLDASVIMPID 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + V + + +D I I++++ ++ + S
Sbjct: 251 FLRVPMAAVVGFYAYGEGVDAWVVIGGCIILLSNFQAMMSERVRSK 296
>gi|307110936|gb|EFN59171.1| hypothetical protein CHLNCDRAFT_56765 [Chlorella variabilis]
Length = 2003
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/316 (10%), Positives = 80/316 (25%), Gaps = 32/316 (10%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV---SVLEVISHRVLWSLPGVFFAIVY 73
+ S M G + I T + + L V ++++ R +
Sbjct: 1672 NSPSNTYMWGLFLYSLSTIAGASTSVIVKLLGGVGGMPAMQLVLVRSCVLVAVCLP---- 1727
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + +L + A+ + F+ PV+
Sbjct: 1728 ---HLRHPAARKLIAERHDLLFVRGCLGFCSVALIYCAVRLLPLSVAIALAFLAPVLVAA 1784
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL------------LSLAIAVTWSAY 181
L L ER + A L + L++ + + + V +
Sbjct: 1785 LSPPLLHERPPRSVLAALALAAVGALVVAHPPSLGMLLPGSELHRAADRPSGLGVAAALG 1844
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVV----------WNGFSGGEHFFLGNIPDTL 231
A + I + + +
Sbjct: 1845 HAATAAGAKITVRSLGIGTTSRHVAGVIVLSAGLVSALGAGLVCLLQRSFVLPAQASQWW 1904
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
L G++ + G++R +ST + Y + + + + F+ P +
Sbjct: 1905 LLAAVGVVGYLHQLTMTAGLQRVPVSTASSLTYLSIVWSLAADYFLFHHPPAGSSMLGAA 1964
Query: 292 IVVIAMVVYLLPTVIN 307
+V ++ + +
Sbjct: 1965 AIVCGGLMVAMWRMHT 1980
>gi|239932545|ref|ZP_04689498.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 308
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/284 (9%), Positives = 70/284 (24%), Gaps = 29/284 (10%)
Query: 37 WGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+G + + + L + L V+ RV + + V G L +
Sbjct: 3 FGGSGVAAKPLIEAGLDPLHVVWLRVTGAALVMLPLAVRHRGLLRRRPGL--------LA 54
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
F +A + AL + ++ P + + + + I +L
Sbjct: 55 GFGLFAVAGVQACYFAALSRIPVGVALLVEYLAPALVLGWVRFVQRRPVTRAAAIGVVLA 114
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI---------------- 198
+ L + + + V S +G
Sbjct: 115 VGGLACVVEVWSGLGFDALGLLFALGAACCQVGYFVLSDQGSDAGDEAPDPLGVIAYGLL 174
Query: 199 ---EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + E L + + ++R
Sbjct: 175 VGAAVLTVVARPWSMDWSVLAGSAEMDGTPVAAFVLLAWIVLVATVVAYVTGVLSVRRLS 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G++ ++ V + +L + + + +V++ +
Sbjct: 235 PQVAGVVACLEAVIATVLAWVLLGEHLSAPQIAGGAVVLLGAFI 278
>gi|227821796|ref|YP_002825766.1| putative transporter, permease protein [Sinorhizobium fredii
NGR234]
gi|227340795|gb|ACP25013.1| putative transporter, permease protein [Sinorhizobium fredii
NGR234]
Length = 266
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 83/270 (30%), Gaps = 16/270 (5%)
Query: 50 VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI 109
+S +V +R + L + ++ G ++ PK + + +LA F
Sbjct: 1 MSPGQVTFYRFFFQLVSIVPLLLTAGGLRAI------YPKRLWPNLLRGVLLAAAALLFF 54
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL 169
++ YFV P I L ++ L+E++ + A + +I+ S
Sbjct: 55 VSVKYMPLADAFAIYFVEPFILTCLSALILREKVGWRRWTAIAVGFGGAMIVIQPSFAIF 114
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV----------LAIPALFYVVWNGFSGG 219
A+ A+ FA + + + + + G
Sbjct: 115 GLTALLPMACAFLFACYLFLNRAVGSADSPLAMQTIAGIGGTLFMVGVIAIGNGFGAVDF 174
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
E + + +I G ++S+ + + A LS + Y + +
Sbjct: 175 EPSLPRSPLGWILVIALGTISSYGHLLVVKAFRLAPLSLLAPFHYFEIVSATALGYLVFG 234
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
R + ++V + + +
Sbjct: 235 DFPTPSRWLGIAVIVGSGLFIIWRERGKRR 264
>gi|163857398|ref|YP_001631696.1| hypothetical protein Bpet3086 [Bordetella petrii DSM 12804]
gi|163261126|emb|CAP43428.1| putative membrane protein [Bordetella petrii]
Length = 307
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 88/281 (31%), Gaps = 9/281 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGG 77
A++P +G A +L+ + L V + R L + G
Sbjct: 16 AAMPAGVGIALYLAALVLFASFDAAVKHLVTVYPAPFLNVMRYL--SVATIAVGLVLRHG 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L T + + T+ I+ + YF +P+I V L
Sbjct: 74 LPRLSATPAKGLLLLRGLMLGTVGTCFMTALIWM----PLSEATAIYFTSPLIVVALSPW 129
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L+ER+ Q A L +L++ G + SA +A + G
Sbjct: 130 LLRERIGARQWSAVALGCAGMLLIVRPGGSLPWLGTALMAISAVSYALFQVLTRKLSGRV 189
Query: 198 IEMCVLAIPALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
AL ++ + D ++ G+ N + +R
Sbjct: 190 PSHVQYGYTALVCLIVTALPAPFFLPDPWPDARDWAAIVLLGVTNGLGQILLIAAFRRVP 249
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
ST+ Y L+ + S F+ +P D + ++V A
Sbjct: 250 ASTLAPFNYCQLLMAVAYSTFVFARPPDMLAMSGMALIVAA 290
>gi|149915423|ref|ZP_01903950.1| transmembrane protein, putative [Roseobacter sp. AzwK-3b]
gi|149810712|gb|EDM70553.1| transmembrane protein, putative [Roseobacter sp. AzwK-3b]
Length = 300
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/294 (11%), Positives = 84/294 (28%), Gaps = 5/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L + L+ + + S + R L S + ++ G
Sbjct: 2 NDQVKGLLITAIGVLFVVPDSLFIRLI-DASAPTITFWRGLTSGSFILLGVIAVMGLRGF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++ F+ A+ F PV + +FL
Sbjct: 61 REVARTGLPGLLY----TVLIGATAPGFVLAVKWTSVANVVFIIASMPVFAAIFSRIFLG 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E ++ ++ + + L I+ SG + + A + ++
Sbjct: 117 EAISKRMVLTMAGVFVGLGIIAWGSGETEGASWQGDLVALGVSASFAGAMTTARKLKATS 176
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ AIP + L+G+G + C+ + G + + V
Sbjct: 177 MIPAIPLAYLGASVLIWPLADPVAPVAEQWHLLLGHGAFITVSTCLLTLGPRYIGSAEVA 236
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ +L + ++ + +V+ + L + + +
Sbjct: 237 LLILLESVLAPLLVWAVIGEDPGPWALAGGVVVIGVLFASNLWALRARHRMRNA 290
>gi|83746518|ref|ZP_00943569.1| Transporter, drug/metabolite exporter family [Ralstonia
solanacearum UW551]
gi|83726849|gb|EAP73976.1| Transporter, drug/metabolite exporter family [Ralstonia
solanacearum UW551]
Length = 324
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/282 (9%), Positives = 81/282 (28%), Gaps = 1/282 (0%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A + + + S E++ +R + + + G+
Sbjct: 21 LWMVLAAFAFSAMGVCVKLASAHYSTGEIVFYRSAIGVVLMGAVLYRTGAGVRTPHFASH 80
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++V + + + +T + + + G +R
Sbjct: 81 IKRSVFGVTSLLLWFSSISLLPLATAMTLNYMSPVWIALIIGAGTALAGKPGGADRKMVT 140
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + + ++ LL ++ + V+ A + G V
Sbjct: 141 AILMSFIGVICLLQPSVGPSQMTGGMIGLVSGMFTALAYVEVRQLGDLGENEARIVFYFS 200
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ + + + L+ GLL + + KR ++YT
Sbjct: 201 LVSALAGGAWMLIDGTHPHTWRSAWLLVTVGLLATLGQTAMTRAYKRGNTLLTANLQYTG 260
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + ++ + + +++ + +V + S
Sbjct: 261 IVFASGWGMLLWHDHLNVLSWVGMVLIIGSGIVTTVMRARQS 302
>gi|115522215|ref|YP_779126.1| hypothetical protein RPE_0186 [Rhodopseudomonas palustris BisA53]
gi|115516162|gb|ABJ04146.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas
palustris BisA53]
Length = 320
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 78/289 (26%), Gaps = 17/289 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG + + L ++ + R +L + S
Sbjct: 20 VALMLLCCLSWGFNQIAVKLVLPEIPPFLQATIRSSGALVVILLVA------WSRNVKLF 73
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + +F+ + + + LL + + P FL ERL
Sbjct: 74 QRDGTLKAGLFAGVLFGLEFVLIYRGLLLTTASRAAVFLYTAPFFVALGSYHFLHERLRR 133
Query: 146 LQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
LQ L + + G +L A+ + + T +
Sbjct: 134 LQWAGLALSFAGVALAIGVPQPNVDASVLLGDLMLVGGGALWAATTLIVKSTALGRAPAE 193
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V + G + L + F I+ IK
Sbjct: 194 KGLGYQVAISIPILAAAAWLADETIPAMPGPLSLALMAYQAIWVVGLTFLIWFGLIKTYS 253
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
ST+ + PL + + ++ P+ + +V+ + + P
Sbjct: 254 ASTLSAFTFITPLFGVAAGYVVMHDPLTPAFGVAALLVIAGLYLVNRPA 302
>gi|325124148|gb|ADY83671.1| hypothetical protein BDGL_003085 [Acinetobacter calcoaceticus
PHEA-2]
Length = 306
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 85/282 (30%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A ++W + + T+++ +S + + +R L + + + L
Sbjct: 12 FIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFMSVWRQRRLVI-- 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V SA + ++ G A P+ ++F+ LK+ N
Sbjct: 70 --PYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAILKDVPNR 127
Query: 146 LQIIAALLIILSLLIM--------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L LL + L G L + + Y F +
Sbjct: 128 FAVFGSILSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKKWQLPLPI 187
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I L + + ++ +++ +
Sbjct: 188 MTSLYVQIGFSVIFHIPLILWFGLDALNVQNAPSAIYAGVFASLIAPLVWMLAVQQLGPN 247
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ V + L + T+ +++ +++
Sbjct: 248 RTSIFMNLVPVFTAVIASVWLSEQWTIYHTLGGIVILTGIIM 289
>gi|311104781|ref|YP_003977634.1| hypothetical protein AXYL_01581 [Achromobacter xylosoxidans A8]
gi|310759470|gb|ADP14919.1| hypothetical protein AXYL_01581 [Achromobacter xylosoxidans A8]
Length = 295
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/286 (10%), Positives = 81/286 (28%), Gaps = 15/286 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G +F ++W + + + + + + ++ R + +F + L+
Sbjct: 8 RAGLALMFSTILVWAGSWIAMKLIVPYIGPFDFVALRYVSGGVVLFALAIAMRRPLA--- 64
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
P L+ T A GF AL++ S + P + FL ER
Sbjct: 65 ----MPPWKLTLLIGLTQTAGFQGFVQTALVSGGVGKVSLMAYTMPFWVILFAWWFLGER 120
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA-------RKTIPVGSSEG 195
+ + + L+ + + + ++ + +
Sbjct: 121 PTARHGLGIAMAAIGLVCFVEPWNGLGDIRPVLLGLGSGLCWGVGTVLSKRMFERHAPDV 180
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L G T + + + ++ ++
Sbjct: 181 MTFTAWQMLLGGLVMTPVAFLVPQMPAIWGWQLWTGMAYIVLIATAAGWLLWLLVVRLVP 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S G+ P++ ++ + +L + +++ + V
Sbjct: 241 ASIAGLSSLGVPVVAMLFAWALLSEQPSPAELSGMALILAGIWVVS 286
>gi|299535158|ref|ZP_07048483.1| hypothetical protein BFZC1_04023 [Lysinibacillus fusiformis ZC1]
gi|298729475|gb|EFI70025.1| hypothetical protein BFZC1_04023 [Lysinibacillus fusiformis ZC1]
Length = 299
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 90/291 (30%), Gaps = 13/291 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + WG++ + LE ++V V++ R + + +
Sbjct: 9 VLMVIVTMFWGLSYTFMVMGLETLAVYNVVALRCIIAFFVAGLIFY--------KRMIKV 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N K + +L + + ++ L + F +T V+ S K+ +
Sbjct: 61 NGKTLKYAAIQGFLLFIVFALSLFGLQSTSVSNAGFILSLTVVLVPIFSSFIEKKLPSRA 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI----AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A + ++ + ++T H + A + + + E +
Sbjct: 121 VSFAIICTMIGITVLTAHGSFTFHKGDLLVAIAALCYSIYLLLNSSFTRNVESISYGIYQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L ++ +V I L + ++F F + + + G++
Sbjct: 181 LGFAGIYALVLTFLFETPTMPNSAISWIAILGLGIICSAFCFVGQTVAQQYTSATHTGLI 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P+ + ++ + + I I ++I +V L K
Sbjct: 241 FSLEPIFAAMFAMMFIGEGITMKLMIGGSFILIGNLVAQLEHFHVLRFMKK 291
>gi|296454281|ref|YP_003661424.1| hypothetical protein BLJ_1142 [Bifidobacterium longum subsp. longum
JDM301]
gi|296183712|gb|ADH00594.1| protein of unknown function DUF6, transmembrane [Bifidobacterium
longum subsp. longum JDM301]
Length = 311
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 81/285 (28%), Gaps = 16/285 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + LWG + L +F +E + ++ R++ + +
Sbjct: 25 LMLLGCAALWGGSYLLAKFAMEAIPPQWLMGLRMIGACLCMLAL-------FHKHIVPYL 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
PK + + L T + ++F V++ F + K R +
Sbjct: 78 TPKIIVPALVVGLTYWGTMVTQTIGLQTIEPGRSAFLTAAYCVLTPFATWIVSKTRPKAI 137
Query: 147 QIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++A ++ ++ + ++L +G L +
Sbjct: 138 NLVAGVICLIGVGFVSLKPGGSLSLSAGDWLTIATAVIFSFNLTCLGVYTKRFDPIAVTF 197
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+A +L L + + + G+ S
Sbjct: 198 VQFGVAGVLFIIGALFTEPMPNASWLAPSVVASVLYLFLGATMSAQIMQNIGLAHVPASQ 257
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I+ T L + S + I + F ++ A+++ ++
Sbjct: 258 ASIIMCTESLFAVTFSALFWGERIMWTSLVGFALIFAAVLMSVIR 302
>gi|229527171|ref|ZP_04416565.1| permease [Vibrio cholerae 12129(1)]
gi|229335402|gb|EEO00885.1| permease [Vibrio cholerae 12129(1)]
gi|327482988|gb|AEA77395.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio cholerae LMA3894-4]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 83/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSAIALLVICAAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACALSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWYENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|225025390|ref|ZP_03714582.1| hypothetical protein EIKCOROL_02288 [Eikenella corrodens ATCC
23834]
gi|224941834|gb|EEG23043.1| hypothetical protein EIKCOROL_02288 [Eikenella corrodens ATCC
23834]
Length = 289
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 88/293 (30%), Gaps = 14/293 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L+ A ILW + ++ ++ +L L + A + +L+
Sbjct: 1 MLYQIIALILWSSAFIAAKYTYTMTDP------LLMLLCRLLLASLLVLPAALRFGRSLE 54
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L + V L S + P++ VF+G F ++
Sbjct: 55 KRHWRPLLWLTFLNYVVVLAMQFVGLKYTSATSASTIVGLEPLLMVFIGHFFFRDFARWY 114
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--------FI 198
+ L + ++ SG A + ++ F
Sbjct: 115 HWLCGLAAFAGVALLIAGSGGEGDISLFGCLMVFGGGAVFCTTMRPTQRMIAEIGAPAFT 174
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + P L V F+ L + + +++ G+ +
Sbjct: 175 SLSMAVAPLLCLPVSLAFADRLRIEWNWPGALGLLYLGVCCSWLSYTLWNKGMTSVSANF 234
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
G++ + P+ + +V +L + + + + +V+ A + + + +
Sbjct: 235 SGMLIASEPVFGTLLAVLVLGERVSALSWLGILLVIAATAASVAMPKLLARRQ 287
>gi|167755708|ref|ZP_02427835.1| hypothetical protein CLORAM_01223 [Clostridium ramosum DSM 1402]
gi|237734675|ref|ZP_04565156.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167704647|gb|EDS19226.1| hypothetical protein CLORAM_01223 [Clostridium ramosum DSM 1402]
gi|229382003|gb|EEO32094.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 296
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/296 (12%), Positives = 87/296 (29%), Gaps = 20/296 (6%)
Query: 26 GTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L +WG T + T+ L +E++ R L +
Sbjct: 7 GHLAALLTIFIWGTTFISTKILLTDFKPIEILFFRFL-------IGLFILILIYPKRLRK 59
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF-LKERL 143
+ + + + +++ AL + P + L +E L
Sbjct: 60 TTKKQELTFALTGLCGVTLYYLLENIALTYSMASNIGVIISIAPFFTAILSHFILKEETL 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----------WSAYCFARKTIPVGS 192
N II + ++ +++++ + + +S +
Sbjct: 120 NQNFIIGFMAAMVGIMLISFNGSSNFKLNPLGDILALLAALVWAVYSILTKRISDYGYST 179
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ GF F I L ++ F ++ +K
Sbjct: 180 IQVTRRTFMYGVTFMFLTLIPLGFKLDLGRFSNPIYLGNILFLGLGASALCFVTWNMAVK 239
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I Y P++ +V+S+ +L + I + I + +I + + V +
Sbjct: 240 ILGAVKTSIYIYIVPVVTVVTSIIVLHEQITLMAFIGTVLTLIGLFLSQKREVQKN 295
Score = 37.2 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 16/147 (10%), Positives = 40/147 (27%), Gaps = 1/147 (0%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLG 225
A+ F + + +
Sbjct: 2 NKDFSGHLAALLTIFIWGTTFISTKILLTDFKPIEILFFRFLIGLFILILIYPKRLRKTT 61
Query: 226 NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ-PIDT 284
+ F + + + + + + + S +G++ AP + S FILK+ ++
Sbjct: 62 KKQELTFALTGLCGVTLYYLLENIALTYSMASNIGVIISIAPFFTAILSHFILKEETLNQ 121
Query: 285 VRTIVFGIVVIAMVVYLLPTVINSGKN 311
I F ++ +++ N N
Sbjct: 122 NFIIGFMAAMVGIMLISFNGSSNFKLN 148
>gi|154175241|ref|YP_001408357.1| RarD protein [Campylobacter curvus 525.92]
gi|112803198|gb|EAU00542.1| RarD protein [Campylobacter curvus 525.92]
Length = 294
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 112/294 (38%), Gaps = 6/294 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS---L 80
+ G L A L+G + F++ + E+ +R+L++LP + AI +
Sbjct: 2 LKGILCSVLASFLFGCIYYLSVFMQPLGGEELFGYRMLFTLPLIVVAIFLLKQKRNFKEF 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + PK + +L+ +++I + +++A S Y + P++ V +G + K
Sbjct: 62 LLTLKQKPKLIAVLLATSSISSFQMWLYLWAPSNGAALKVSIGYLILPIVMVVVGRLVFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E L+ +++++ ++ + + +S A + Y F
Sbjct: 122 EHLSKIKLLSISFAVMGVGSSLVS--SSGISWESAGVFCLYPVYFGLRKFYGIANFPSFA 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ LF + + N L+ GL++ ++ +G
Sbjct: 180 IEMFFMFLFSSYFITLADMGFVLSKNPKIYYLLVLMGLISGTALISQIISSILVPINVLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ Y P+ M S I + +D + + A+V+ ++ ++ N +K
Sbjct: 240 LLTYLEPIFMFAVSFMI-GEKLDESSYFLMFCLSAAIVLLMIDSLNNIKISKRA 292
>gi|86360975|ref|YP_472862.1| multidrug ABC transporter permease [Rhizobium etli CFN 42]
gi|86285077|gb|ABC94135.1| probable multidrug ABC transporter, permease protein [Rhizobium
etli CFN 42]
Length = 285
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 88/272 (32%), Gaps = 8/272 (2%)
Query: 30 VFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +L+ + ++L +V +V+ R L + + I G ++L + K
Sbjct: 1 MLLGDLLFALNDAMGKWLMTSFAVGQVLVIRSLGAFILLGPMI-ARQGPMALFRVEQKGL 59
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + + + + A+ Y P+ L FL E++ +
Sbjct: 60 QFMRVAMATGDVALF-----YAAVAYLPLADVMTFYMAGPIYIAALSHFFLGEKIGWRRW 114
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+A L+ ++I S L ++ ++ FA + V
Sbjct: 115 LAVLVGFAGVVIALRPSTAMLSLPSLFGLAGSFSFALSLVMSRYLRSTSDTTLVTWQTVA 174
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
S I + L+ ++ + + + +K A S + ++YT L
Sbjct: 175 ALATGIALSIDHWQPATPIDWSGMLLLG-VVATCAHLLITRSLKLAPASLLAPLQYTLLL 233
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
IV D I I+V A +
Sbjct: 234 WAIVLGYIFFNDIPDLQIVIGASIIVFAGLFI 265
>gi|89067288|ref|ZP_01154801.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
gi|89046857|gb|EAR52911.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/289 (8%), Positives = 66/289 (22%), Gaps = 2/289 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
L ++W + + + L +S R S L +
Sbjct: 3 RRAMLMGVGFALMWASAFTSARIIVQAAPPLSALSLRFFVSGLFAVLLARALGQSWRLTR 62
Query: 83 DTLKNPKAVGMLVFSAT-ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
G+ L + A L ++F +
Sbjct: 63 TQWIATIVFGVCQNGLYLGLNFVAMQSVEASLATIIASAMPLCVALASFTLFGERLPALG 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +A + +I+ + + + + + I
Sbjct: 123 VGGLVAGVAGVALIMGSRLSGGADPVGVALCLLGLLSLTVATLAVRGASSGGNFLMIVGL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I A F+ + ++ + R + +
Sbjct: 183 QMLIGAAALAGPALAFEEIAIDWSWQLVAAFVYTVVVPGVLATLVWFQLVNRIGATRAAV 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ P + + IL + + + I I+ ++ L + +
Sbjct: 243 YHFLTPFFGVAIAAMILGEKVGPLDGIGVAIIAAGILAVQLAKARPARR 291
>gi|288929698|ref|ZP_06423542.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288329203|gb|EFC67790.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 295
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 94/299 (31%), Gaps = 18/299 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYT--QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T+ G L + I +G+ PL+ + V+ +R + + +++ +
Sbjct: 2 STTVKGFLNASISGITFGLIPLFAIPVLATGMHSTSVLIYRYAFGCLAMLGMLMFHRTRM 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + + AV I + + F PV ++ L +F
Sbjct: 62 RLAFGDFLRILL------LSAMYAVSSIALIEGYNYMASGIATTLLFSYPVWTLLLSVLF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIP 189
L ERL+ +A + + + ++ L ++ Y +
Sbjct: 116 LHERLSLTTAVAIGIAVAGVFFLSGILDGNGSMEGLTGLFLLLLSGFLYAVYMVVFPRMR 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT-LFLIGYGLLNSFVFCIFS 248
+ + + L ++ F+ G + + + +
Sbjct: 176 IRQMPSLKLTFYIFFFAMLILTLYATFTRGRIDPIDTRSQLVNLFLLGLVPTAVSNVTLI 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+K+ + ++ P+ + + + +P+ I F +++ ++++ +L
Sbjct: 236 VALKQISSTLAAVLGAFEPMTAMCVGILLFGEPLTLPIVIGFVLIITSVLILVLSKRKT 294
>gi|209518555|ref|ZP_03267375.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
H160]
gi|209501005|gb|EEA01041.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
H160]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/299 (9%), Positives = 89/299 (29%), Gaps = 21/299 (7%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG++ T+ LE + L + + R ++P + V + L
Sbjct: 1 MLILAVMWGLSIPVTKLGLESLPPLTLTAMRFAIAVPLLLIFAV--------GRHPLPRH 52
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + + + + + + + PV VF ++ LK+ ++ Q
Sbjct: 53 AWPRVAMLGVLGIGIGQVAQTFGVSGTSASVGTIISATIPVFIVFFAALRLKQHVSGWQK 112
Query: 149 IAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L + ++ +G + L A+ + Y +
Sbjct: 113 LGLLAAFSGIALVAFAREHGATTMSDTTAGGAICVLLSALAIAFYYVWSVELTTAYGTAT 172
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
L F + + + ++ ++ ++
Sbjct: 173 VAAWSTLFGFVALLPWAMWEMWHVPFHVTTQGLSAAVYLGVIVTVAGLFLWLNLLRIVPA 232
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+++ P+ I ++ F+ + + +V+ + + + + + +
Sbjct: 233 RVAASVQFLQPVFGIAAASFMFGDRLGPSFVVGVALVLAGLALTMASRNEAGNRAQNRH 291
>gi|220918130|ref|YP_002493434.1| protein of unknown function DUF6 transmembrane [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219955984|gb|ACL66368.1| protein of unknown function DUF6 transmembrane [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 286
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 84/286 (29%), Gaps = 21/286 (7%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L +F + T L + L ++S EV R S + +
Sbjct: 4 LVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLW-------RRPVRVA 56
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +L + V+ G F+ + + Y +TPV + V L ER
Sbjct: 57 RRDLLALLGLGVIAIPVNQGLFLAGMAWTTPGHAALLYALTPVFVFLVARVRLGERAGPA 116
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGSS 193
++ L ++++ L G L + + + +
Sbjct: 117 KLAGIALAFAGVVVVLLGRGAVGLHGSSRQLAGDLLILLAVVAWSVFAVAGKPYAQRYGA 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G VL V L L + + ++ + + R
Sbjct: 177 VGSTGVALVLGTLVYLPVGLVATDWSRLGALSTTGWASLGYLVLLTSVVAYILYYWALSR 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
A+ S V I P+L + + I + + +V+ +++
Sbjct: 237 AEASRVAIWSNLQPVLTALLAWAIAGERLTAPFVAGGAMVIAGVIL 282
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 32/135 (23%)
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
+ + SA + L L + + +
Sbjct: 1 MVHLVMFLHSAISAGTYLAAKRALGELSPFEVALVRFGLSSLAFGLLLWRRPVRVARRDL 60
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
L + +F G+ ++ P+ + + + L + +
Sbjct: 61 LALLGLGVIAIPVNQGLFLAGMAWTTPGHAALLYALTPVFVFLVARVRLGERAGPAKLAG 120
Query: 290 FGIVVIAMVVYLLPT 304
+ +VV LL
Sbjct: 121 IALAFAGVVVVLLGR 135
>gi|119945712|ref|YP_943392.1| hypothetical protein Ping_2032 [Psychromonas ingrahamii 37]
gi|119864316|gb|ABM03793.1| hypothetical transmembrane protein DUF6 [Psychromonas ingrahamii
37]
Length = 296
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 93/295 (31%), Gaps = 6/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +L + +++ V +VI R + + G ++Y
Sbjct: 2 TKNTQGFALAIFGVLLLAPDVVLMRWISLVHA-DVIFWRGIGFIIGFSGLVLYRYKS--- 57
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ KA V S + A+ + ++ T T +PV + + +FL
Sbjct: 58 -DFFVAIKKAGWTGVASGVLFALGTYCYSASIQTIGAASTMVIISSSPVFAALINWLFLN 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+R++ IIA ++ ++ + L + +A A S I
Sbjct: 117 QRMHVFSIIAIFFVLTGIVFIAFGDINQLSMSTLLPLTTAVFMAINFNLAESKADTDISP 176
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ L V F+G + LI + F + + +
Sbjct: 177 GLIWGGIL-LTVIALFNGVPEVQGQGVDILFVLINAIFIMPIGFTLLQIAPRFINATQTS 235
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ PL+ V +L + + I+ IA+V Y+ + K +
Sbjct: 236 VCLLLEPLVGPVIVFLMLGEKPGGNTFVGCAIIFIAVVYYIYNESNQNKKTYKNR 290
>gi|56696082|ref|YP_166436.1| hypothetical protein SPO1189 [Ruegeria pomeroyi DSS-3]
gi|56677819|gb|AAV94485.1| membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 294
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 90/291 (30%), Gaps = 7/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + V A +LW + L + +E ++ R + A++ F
Sbjct: 1 MRYSTGVILVATAAMLWSLMGLAIREIEVAGTWAILFWRS----AAMVPALLAFFVWRKR 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L V + I+A+ + F + +P ++ L V L+
Sbjct: 57 KPILPALRATGRAGLMAGFGLVVAFAGAIFAIQSTTVANAVFLFAASPFLAAALSWVVLR 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI---PVGSSEGFF 197
E + A + ++ L++M ++ G
Sbjct: 117 ETVRRATWAAIAIALIGLVVMVREGLALGALAGNLAALASAMGFALFTLSLRWGRLGDMM 176
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + ++ + GE + + + L + +++ G + +
Sbjct: 177 PAVAIGGMLSMMVALGMLGLTGEPLLVPARDIAIAMAMGAGLLAVGMALYTMGSQVVPAA 236
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ ++ +L V +L + I++ A+ + L +
Sbjct: 237 ELTLITMIESMLAPVWVWLLLGEEASAGTLWGGAIILGAVALNALSGMRRK 287
>gi|330992188|ref|ZP_08316136.1| S-adenosylmethionine uptake transporter [Gluconacetobacter sp.
SXCC-1]
gi|329760387|gb|EGG76883.1| S-adenosylmethionine uptake transporter [Gluconacetobacter sp.
SXCC-1]
Length = 308
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/304 (13%), Positives = 82/304 (26%), Gaps = 16/304 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
G L + A + + Q+ LE+I R L+SLP V
Sbjct: 1 MKHDLKRGALLLASATLFTAALNALQKLTGTQLPALEIIFFRNLFSLPFVLLIAARTKII 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L G + + + V + + + P+ V L
Sbjct: 61 LK--------THHFGGHLLRSVVGLVSMIMVVVTVTRLPLAEQQVLSYTQPLFLVLLSIP 112
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPL-------LSLAIAVTWSAYCFARKTIPV 190
L E+ + + IA + +L++ G+ A T+ +
Sbjct: 113 LLHEKPSLQRWIAVSIGFAGVLVVASGKGLLHGSAATVPNWAYFVALAQGAVGALTTMQI 172
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ A+ + + + D L L+ G + +
Sbjct: 173 RQLSATEASTTIALWQAILMTLMTALPLPFIWTTPGMTDALCLVAVGAFAGIAQVLQTEA 232
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
A++S +G Y+ L + F + ++V + V L +
Sbjct: 233 FASAQVSAIGPFAYSGLLWAGLIGWFGFGEVPGVAMMCGGLLIVGSGVWMLRHDRPARQQ 292
Query: 311 NKTK 314
Sbjct: 293 EAVA 296
>gi|327401602|ref|YP_004342441.1| hypothetical protein Arcve_1727 [Archaeoglobus veneficus SNP6]
gi|327317110|gb|AEA47726.1| protein of unknown function DUF6 transmembrane [Archaeoglobus
veneficus SNP6]
Length = 272
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 81/287 (28%), Gaps = 17/287 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + L + ++WG T + L+ +S + R S +
Sbjct: 1 MKRLYADLGLLIVALIWGSTFPVVKIALDSMSPFAFNTVRFFISCLFFIPFL-------- 52
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ ++ + + F L F V V++ + +
Sbjct: 53 -------KKEGFVDGFKIGVMVFLGYSFQTVGLEYTTATNAGFITSVYVVLTPVVAYILY 105
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPL-LSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ ++ + + + + +++ +SG + L +A + +
Sbjct: 106 RIPVDRRDALGVTMAFVGIYLLSGYSGFNIGDVLLLACALAFATEIAMISHYSRLRNPTM 165
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
F LI L + ++ + K S
Sbjct: 166 LAFWQIFAVAVLSAPLAIITTTRFEFNTDVVYALLITAFLATFVAKMLQNWLQRYTKPSD 225
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ + V + IL + + ++ +++IA+VV L
Sbjct: 226 AAVILSMEGVFSHVFAAVILAEHLSILQYAGALLIIIAVVVVSLRHR 272
>gi|312879109|ref|ZP_07738909.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
gi|310782400|gb|EFQ22798.1| protein of unknown function DUF6 transmembrane [Aminomonas
paucivorans DSM 12260]
Length = 312
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 83/289 (28%), Gaps = 16/289 (5%)
Query: 29 FVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
V A LWG + + + R L + V +
Sbjct: 23 AVVLAACLWGTLGPMGRLAYENGATPATISLVRGLVACGLVGGWAFLRCPS----ALRFR 78
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + +A+ + + A++ + ++ +P+ + + KERL L
Sbjct: 79 REEVPELAAYGLFGMALLYVGYNLAVVRIPVGVAVLLFYTSPLWVILGTVLLRKERLTPL 138
Query: 147 QIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ +A LL + + G+ + A R +
Sbjct: 139 RGLALLLGLGGVWFAVGGRSALSGHLDLLGVLGALASGASYAVYVLGGRYGLGRTEPFRM 198
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
F++ + AL + + + L + + + +++
Sbjct: 199 FLQAFLWGTGALLVYGAVFGGAKVLASVRPAGWGVMVYMGALPTVGGYALLLWALRKVPS 258
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ ++ + ++ + IL + ++V ++ + L
Sbjct: 259 TVASLVSMSEIAFALLWAWLILGEVPSRGALQGGALIVASVALLSLEGR 307
>gi|220914975|ref|YP_002490283.1| protein of unknown function DUF6 transmembrane [Methylobacterium
nodulans ORS 2060]
gi|219952726|gb|ACL63116.1| protein of unknown function DUF6 transmembrane [Methylobacterium
nodulans ORS 2060]
Length = 314
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/315 (10%), Positives = 91/315 (28%), Gaps = 16/315 (5%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSL 64
+ + + + + + ++W + +++ + QVS L + S R L +
Sbjct: 2 ARITPAPSAPTQIHAHHAAKAYMLLTFTALIWAGNVIASKWAVGQVSPLALTSVRWLVAC 61
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSY 124
+ L P +L+ F A +
Sbjct: 62 AALVPLAARQVACEWRL----LRPAWFRILLMGGCGFTAFNALFYIAGTYTSATNIALFQ 117
Query: 125 FVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA 184
PV+ + + + R++ +Q+ L+ +L + + H +L
Sbjct: 118 GAIPVVVLACSFLVYRTRVSLIQVTGVLVTLLGVAVAATHGDWEVLRTFAFNRGDLLMLV 177
Query: 185 RKTIPVGSSEGF-----------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ G + G F M + A+ ++ ++ G + +
Sbjct: 178 ACVLYAGYTVGLRARPAISGLTFFAAMALAALLTSLPLLMVEWATGRLIWPTGKGWAIIA 237
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ F G++ + G+ P+ +V + +P + +V
Sbjct: 238 FVGLGPSLISQLSFMRGVELIGPNRAGVFVNLVPVFGAGLAVSLAGEPFRLDNAVALTLV 297
Query: 294 VIAMVVYLLPTVINS 308
+ + + +
Sbjct: 298 LSGIFIAERLGRRSR 312
>gi|170740660|ref|YP_001769315.1| hypothetical protein M446_2425 [Methylobacterium sp. 4-46]
gi|168194934|gb|ACA16881.1| protein of unknown function DUF6 transmembrane [Methylobacterium
sp. 4-46]
Length = 313
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/291 (8%), Positives = 76/291 (26%), Gaps = 11/291 (3%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ V + L G + + T+ L+ V + + + R + + ++ L +
Sbjct: 11 LVLVLLSTFLQGSSFVATKAVLQDVQPMWLATLRFALAAVSLLPVLI--PRLLRPRGEGG 68
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + F L + + + P++ L + L+E +
Sbjct: 69 PPLPWLRLAIIGLLQSTGVMAFLNIGLTSTTAPMAAILMASNPLLVALLAGLVLREPVRG 128
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK--------TIPVGSSEGFF 197
+ + ++I + ++ +
Sbjct: 129 QVWAGLAISFIGVVICIGAGTVIHGAVGRGELLVMLGSTCWALATLVTKRFNLHVDAWVL 188
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+L +V FL ++ ++ ++
Sbjct: 189 AFWQMLFGSMALALVALVRGDDFSLPASTTTWLYFLWLAIPASTGAMGLWFAALRIGGAV 248
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ PL V + + + + ++ I +V+ + +
Sbjct: 249 HTSGFLFLCPLFAAVMAFVLHGEVVSWNEIAGGLLIAIGIVLVTRQRALAA 299
>gi|271962197|ref|YP_003336393.1| hypothetical protein Sros_0627 [Streptosporangium roseum DSM 43021]
gi|270505372|gb|ACZ83650.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 290
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 86/291 (29%), Gaps = 13/291 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L V A +LWG + V + + + R++ + A+ L
Sbjct: 3 LAVVGAAVLWGTAGTAGLLVAGVDPISLAAARLVVGGLVLAVAVGPAIRSLPRPAL---- 58
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L + + A FF T T + PV + L + R
Sbjct: 59 -----LLPAAVAVAAYQLCFFAAVSRTGVAIGTVVAIGSGPVFTGLLSWALDRVRPTRRW 113
Query: 148 IIAALLIILSLLIMTLHSG----IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
A + I ++T G +L + A+ + + M +
Sbjct: 114 AGATAVAIAGCAVLTGGGGEVRLDGVLIALLGGLLYAFYAVTAARVISAGASSDAVMGAM 173
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A ++ G + L + + ++ G++ ++T +
Sbjct: 174 FGGAAVVMLPVLLWTGTAWLTEPRGLLTALYLGCATTALAYILYGRGLRTTPVATAATLA 233
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P + + V +L + + ++ ++ V LP + + +
Sbjct: 234 LAEPAVAALLGVVVLGEQLTLTSAAGLLLLGGSLAVVALPERWSGRRGRAA 284
>gi|218288383|ref|ZP_03492673.1| protein of unknown function DUF6 transmembrane [Alicyclobacillus
acidocaldarius LAA1]
gi|218241356|gb|EED08530.1| protein of unknown function DUF6 transmembrane [Alicyclobacillus
acidocaldarius LAA1]
Length = 337
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 84/289 (29%), Gaps = 14/289 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + + ++ + + +R+ + + A+
Sbjct: 6 VFLLALGLVAISFSAIFIAW-SSAPAGVIGMYRLWMAAALLLPAV------WRERPRAQA 58
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ G L S +L +H+ F+I +L + + PV ++ + +
Sbjct: 59 LRRMSGWLAASGVLLGLHFLFWIESLKLTSVASSLIILALEPVFVWIGERLWRRSPAAWV 118
Query: 147 QIIAALLIILSLLIMTLH-------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + + I + + L + + +
Sbjct: 119 DLASMAVAIAGAALAAAASAGLSRTGALGDLMSLLGTIAVSGYVLVGARARAEVPAWTYN 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
CV + NG G + LFL + IF+ + R + +
Sbjct: 179 ACVFVVGGAVLAAANGCLGAPFWGYSARNWLLFLALAVVSTILGHGIFNALLHRVPPTAI 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P++ + + +L QPI + + + + + YL + S
Sbjct: 239 AMTVVGEPVVGSLLATVLLHQPITPLEAVGGAVCLTGVGAYLWRSARQS 287
>gi|218904189|ref|YP_002452023.1| transporter, EamA family [Bacillus cereus AH820]
gi|218536372|gb|ACK88770.1| transporter, EamA family [Bacillus cereus AH820]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDTLSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 294
>gi|119718586|ref|YP_925551.1| hypothetical protein Noca_4367 [Nocardioides sp. JS614]
gi|119539247|gb|ABL83864.1| protein of unknown function DUF6, transmembrane [Nocardioides sp.
JS614]
Length = 318
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 89/286 (31%), Gaps = 15/286 (5%)
Query: 19 ASLPTMMGTL-FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+S+ T GTL A I WG T+ + + ++ +LP + +
Sbjct: 2 SSVETTWGTLSLTALAPIAWGSGYYVTE--AYLPPDRPLFGAMVRALPFGLLLLAFRPRL 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ + + A G L + PV+ + L
Sbjct: 60 PQ-------GEWWARALLLGILNVGAFFVLIFVAAYRLPGGLAATLTATAPVMMMLLAWG 112
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF-----ARKTIPVGS 192
++ER + A + + ++ L G + + +A +++A
Sbjct: 113 LVRERPRAASLAGAAVGFTGVALLVLRGGAAVDPVGVAASFAAVAMSSLGYILIKRWEPP 172
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ L L + G L FL + ++ +G++
Sbjct: 173 VDLLTFTAWQLVAGGLALLPVALVVEGAPPPLDLRAVGGFLYLGLVATVLANVVWFHGLR 232
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
R + V ++ P+ V V + + + + +V++ ++
Sbjct: 233 RLPAAGVSLVGLLNPVAGTVVGVALAGEMFGPTQALGMLLVLVGIL 278
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 13/131 (9%), Positives = 34/131 (25%), Gaps = 6/131 (4%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+A + + F M L + + L
Sbjct: 16 LAPIAWGSGYYVTEAYLPPDRPLFGAMVRALPFGLLLLAFR------PRLPQGEWWARAL 69
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ L F + R + TAP++M++ + ++++ +
Sbjct: 70 LLGILNVGAFFVLIFVAAYRLPGGLAATLTATAPVMMMLLAWGLVRERPRAASLAGAAVG 129
Query: 294 VIAMVVYLLPT 304
+ + +L
Sbjct: 130 FTGVALLVLRG 140
>gi|71282561|ref|YP_270707.1| membrane protein [Colwellia psychrerythraea 34H]
gi|71148301|gb|AAZ28774.1| membrane protein [Colwellia psychrerythraea 34H]
Length = 317
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 84/290 (28%), Gaps = 1/290 (0%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G ++ A +L + ++L Q + V +V+ R L L + + +G
Sbjct: 1 METNQLRGIFYMMAAMLLISVQEALAKYLGQALPVAQVVWARYLGHLVLMIILLWPKNGM 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + L A +++ T+L + F T + I + V
Sbjct: 61 SLLKTNKLFIQIARSLILLIDTVLFFFGLTMLGLAEATAIFFTVPLLVLLLSIPLLGERV 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + LII+ I L S + + S
Sbjct: 121 SASSIVAVIVGFIGTLIIVRPGINGLGSSDLGIGALFIFGAACCTAIYNVTTRKLSASEP 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I + + + VV + F ++ LI GL + K A +
Sbjct: 181 IPVTLFYTAIVGAVVTSLFLPFIWETPTSLEVWAALIFIGLFGGSAHSLIIISHKYAAAT 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
TV Y+ + + + D IV+ + +
Sbjct: 241 TVAPFIYSQIFWALGLGWLMFGELPDFYVYFGGAIVISSGLYLFYHGRTR 290
>gi|58865822|ref|NP_001012126.1| transmembrane protein 22 [Rattus norvegicus]
gi|81883032|sp|Q5M7A3|TMM22_RAT RecName: Full=Transmembrane protein 22
gi|56789813|gb|AAH88758.1| Transmembrane protein 22 [Rattus norvegicus]
gi|149018780|gb|EDL77421.1| rCG25543 [Rattus norvegicus]
Length = 412
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/303 (10%), Positives = 88/303 (29%), Gaps = 14/303 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L +F + + G L T+ + V LE+I R + + V Y
Sbjct: 100 QSRKMWLVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVLQVLSVIVVCYY--QEA 157
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + +I + F I + + + V++ L
Sbjct: 158 PFGPSGYRLRLFLYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAVLAFLLVDEK 217
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIP 189
+ + + L + L ++ L ++ + +
Sbjct: 218 MAYVDMATVVCSILGVCLVMIPNIADEDNSLLNVWKEAFGYTMTVMAGLTTALSMIVYRS 277
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + F E + +LI + ++ F Y
Sbjct: 278 IREKISMWTALFTFGWTGTIWGLSTMFVLQEPIIPLDGETWSYLIAICICSTVAFLGVYY 337
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + V +++ ++ +V + +L I++I++ V +
Sbjct: 338 ALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSVYDVFGGVIIMISVFVLAGYKLYWRN 397
Query: 310 KNK 312
+
Sbjct: 398 VRR 400
>gi|89068294|ref|ZP_01155704.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
gi|89046211|gb|EAR52269.1| membrane protein, putative [Oceanicola granulosus HTCC2516]
Length = 295
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 93/272 (34%), Gaps = 9/272 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A + + + + + + E++++R L V + G + D L+
Sbjct: 22 LWMLGAVLSFSTMAVAGREVSLALDTFEIMTYRSFVGLAIVLAILSVRGGLARVRTDRLR 81
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
F L + +A+ F +P+ ++ L + L ER+
Sbjct: 82 LHAVRNAAHFVGQNL------WFFAVSAIPLAQVFAVEFTSPIWALLLAPLILGERITRT 135
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++AAL+ + +L++ S L +A +A F + + +L
Sbjct: 136 GLLAALVGFVGILVVARPSPDSLSPGLLAAAGAAVGFGVTAVLTRRLTRTESILTILFYL 195
Query: 207 ALF--YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L + FL+ G + + RA + V +++
Sbjct: 196 TAMQAVFGLVCALIDGDMALPSAATLPFLVLIGCAGLMAHFCLTNALARAPAAVVMPIDF 255
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
L+ V+ + + +P+D + ++ A
Sbjct: 256 LRLPLIAVTGMLLYSEPLDIFVFLGGAMIFAA 287
>gi|326424387|ref|NP_763272.2| drug/metabolite transporter superfamily permease [Vibrio vulnificus
CMCP6]
gi|319999777|gb|AAO08262.2| Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio vulnificus CMCP6]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 84/279 (30%), Gaps = 8/279 (2%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ + WG + T+ L SVL IS R + + ++ L K
Sbjct: 21 LLLLVAVFWGTSYGLTKSALVYTSVLLFISIRFSITFLCMLPVVI--RDFRQGLNKDWKI 78
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF---LGSVFLKERLN 144
G ++ + V A + + + + + L +
Sbjct: 79 AIPTGFILSAIFFCEVFGVSQTSASNAAFLISLTVILTAFAELVINKKRISNTLLALTVC 138
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ + L + + +L+ A+ R T + +
Sbjct: 139 SVIGVLLLTSEQGIELSLNTGDYFILTAALLRALMVTMTKRFTEGKAITTSTLTSLQSFV 198
Query: 205 IPALFYVV--WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + V + + F F + +Y ++R + V ++
Sbjct: 199 VASCAIVGVLVYVPAAEIVLPVSLEFWLTVAYLVLFCTLFAFYVQNYAVRRTSPTRVSLL 258
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ PL + ++ L++ + ++ + +++ +++V
Sbjct: 259 MGSEPLFGAIFAMVWLQESLTALQLLGGALILFSVIVTS 297
>gi|291279348|ref|YP_003496183.1| drug/metabolite transporter DME family [Deferribacter desulfuricans
SSM1]
gi|290754050|dbj|BAI80427.1| drug/metabolite transporter, DME family [Deferribacter
desulfuricans SSM1]
Length = 293
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 76/268 (28%), Gaps = 3/268 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G+LF+ A LWG T + + + + R+L +FF +
Sbjct: 1 MDNKELKGSLFIILAAFLWGTTGTTQGLAPSEANSAVLGTLRILIGGLALFFIAYIKNKK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+L L V + + + + S + +FL
Sbjct: 61 LNLSNIPLMLTFLGMASVALYQLSFFYGVKLAGVAVGTVVGIGSSPISAGLLSIIFLKEK 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ I LI + L + +L + +A+ + +
Sbjct: 121 IPAKWYFSTFISLLGLIFIGLGGSNSNYDFNILGIFLAILAGFSYALYTLVSKILLKSLD 180
Query: 198 IEMCV--LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L + + F + + L + + F G+
Sbjct: 181 NDTVMALLFLGGAILLSPILFFNDLSWVFTTKGILVTLHLGLFTTTISYIFFIRGLNYIN 240
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPID 283
+S + T PL + +L + +
Sbjct: 241 VSKTATLSLTEPLTATFLGITVLHEKPN 268
>gi|228946289|ref|ZP_04108616.1| Uncharacterized transporter [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228813339|gb|EEM59633.1| Uncharacterized transporter [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 13/262 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F ++ + + +
Sbjct: 130 GVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I RA S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVR 286
P+ + L + V
Sbjct: 250 LTPITACFVAWIWLGEVPTLVS 271
>gi|196040351|ref|ZP_03107652.1| transporter, EamA family [Bacillus cereus NVH0597-99]
gi|196028836|gb|EDX67442.1| transporter, EamA family [Bacillus cereus NVH0597-99]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 79/262 (30%), Gaps = 13/262 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFLYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGSIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVR 286
P++ + L + V
Sbjct: 250 LTPVIACFIAWVWLGEVPTLVS 271
>gi|158321726|ref|YP_001514233.1| hypothetical protein Clos_2706 [Alkaliphilus oremlandii OhILAs]
gi|158141925|gb|ABW20237.1| protein of unknown function DUF6 transmembrane [Alkaliphilus
oremlandii OhILAs]
Length = 307
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 102/302 (33%), Gaps = 22/302 (7%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + + M ++ G++ L+ + L+ S L+++++R S G+ +
Sbjct: 1 MEENTKNDNKRMVYGAATLYAVITGLSFLFGKIGLQSTSPLDLLAYRFTASFVGILIPTL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + K + +L + + +GF + L PV ++
Sbjct: 61 F-----KWVPLDYNKEKILKILPLALLYPLLFFGFQTFGLQYASSSEAGILLAAAPVFTL 115
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFA 184
L + FLKE+ LQ ++ L+ +L ++ +T G ++ +
Sbjct: 116 ILATYFLKEKTTFLQKLSILISVLGVIYITAKKGSSFEFNNVKGIVFLVLSALSFSGYSV 175
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI--------PDTLFLIGY 236
+ + I + + + + L L
Sbjct: 176 MARGLTKDFSSVELSYMMTIISFICFNTASLGKHLINGTLSAYLIPLKDFSFILAILYLG 235
Query: 237 GLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
L + + +Y + + + S + + ++ IV+ V LK+ I I ++V
Sbjct: 236 ILSSLVTSLLTNYVLSKIEASKMSVFSNLGTVISIVAGVIFLKEEIFYYHIIGSILIVGG 295
Query: 297 MV 298
+V
Sbjct: 296 VV 297
Score = 36.4 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 34/98 (34%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++ L L F ++G++ A S GI+
Sbjct: 48 FTASFVGILIPTLFKWVPLDYNKEKILKILPLALLYPLLFFGFQTFGLQYASSSEAGILL 107
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
AP+ ++ + + LK+ ++ + I V+ ++
Sbjct: 108 AAAPVFTLILATYFLKEKTTFLQKLSILISVLGVIYIT 145
>gi|108798090|ref|YP_638287.1| hypothetical protein Mmcs_1118 [Mycobacterium sp. MCS]
gi|119867186|ref|YP_937138.1| hypothetical protein Mkms_1135 [Mycobacterium sp. KMS]
gi|108768509|gb|ABG07231.1| protein of unknown function DUF6, transmembrane [Mycobacterium sp.
MCS]
gi|119693275|gb|ABL90348.1| protein of unknown function DUF6, transmembrane [Mycobacterium sp.
KMS]
Length = 359
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/304 (7%), Positives = 79/304 (25%), Gaps = 32/304 (10%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + + +G++ + L S ++ R+ + G
Sbjct: 20 RSGLMLAVGSAFAFGMSGPLGKSLMVAGWSPTAAVTARLAGGALLMAVFATVVRRGWLRE 79
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ A +A F+ A+ + + P++ V + +
Sbjct: 80 AVSHWRTVLAY----GAVPIAGAQLFYYNAVSHLTVGVALLLEYTAPLLVVAWLWLTTRR 135
Query: 142 RLNHLQIIAALLIILSLLIMTL---HSGIPLLSLAIAVTWSAYCFARKTIPVGSSE---- 194
R ++ + L + ++++ G +++
Sbjct: 136 RPSNRTLAGVALAVTGIMLVLGVIDSGGFAAAHISLVGVGWGLAAGVCAACYFLMSERVA 195
Query: 195 -------------------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
+ L + + +
Sbjct: 196 TGEENAGSVHPVTLAAAGLAVGGALTALLGLVGVMPLTFTAADTVIAGWTTSWVVPVIAL 255
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + + + GI R + ++ + L ++++ +L + + V+ + IV+
Sbjct: 256 GLIPTAIAYTLGIMGIARLRPRFASLVGLSEVLFAVLAAWVLLGESMTVVQALGGVIVLS 315
Query: 296 AMVV 299
+ +
Sbjct: 316 GLAL 319
>gi|52425808|ref|YP_088945.1| RhaT protein [Mannheimia succiniciproducens MBEL55E]
gi|52307860|gb|AAU38360.1| RhaT protein [Mannheimia succiniciproducens MBEL55E]
Length = 287
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 92/292 (31%), Gaps = 16/292 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + ++ ++ + ++ R + + + +
Sbjct: 1 MLFQIIATLIWASAFIAAKYTYEMMDPVLMVQCRFFIASIIMLPGFFAAYKRVPKER--- 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
M + + + + L + P+++V +G +F K R+N
Sbjct: 58 ----LKIMWLLALINFPLMFLLQFIGLYFTSAASAVTMLGMIPLLTVLIGFLFFKRRINK 113
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIPVGSSEGFF 197
+ ++ +L+ + +++ + G L ++ + K + + +
Sbjct: 114 IDLLLSLVALAGIILTVVGGGEDNLINPWGCLLVLGSAVSFCFCLYLSKDVMQEMAPKDY 173
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ V+ L ++ G+++
Sbjct: 174 TNVLVILGSILCLPFTCVLVRDWSIVPSVKGMISLFYLGIGCTWLAVVLWFKGVQKTPTY 233
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
I+ P+ ++ ++ IL + + TV + + + A V +L V+
Sbjct: 234 ISSILTTLEPIFGVILAILILDERLSTVSAMGILLTLGAAAVSVLIPVLMKK 285
>gi|154245335|ref|YP_001416293.1| hypothetical protein Xaut_1388 [Xanthobacter autotrophicus Py2]
gi|154159420|gb|ABS66636.1| protein of unknown function DUF6 transmembrane [Xanthobacter
autotrophicus Py2]
Length = 337
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 95/276 (34%), Gaps = 8/276 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T+ G + + + L+ + + + ++ + E + R + +F IV
Sbjct: 25 TVKGLIAMALSMALFVTNDTFLKLSIREIPLGEALGLRSFLAGIVLFVLIV------RGG 78
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+V +T+ + ++ AL ++ Y TP+I+ L L E
Sbjct: 79 DLPALRYAFHPRVVMRSTLDTLTTFVYVAALAVMAIASSTTIYMATPLITTALAVPMLGE 138
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ A ++ +I+T ++AI +A A + +
Sbjct: 139 KVGWRSWCAIVVGFCGAVIVTRPDPSTFEAIAILPLLAALFGAIRDVSTRGIGREIPGTV 198
Query: 202 VLAIPALFYV-VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
V L F E + L + +++ G+ + + + A +++V
Sbjct: 199 VGFSGTLVLCATATVFVAWESWKLPPVAVMAYIVASGVAFAGGTLCLVFAFRNAPVASVS 258
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ Y +VS F+ D T+ +VV A
Sbjct: 259 PLRYLLVFGALVSGYFVFGDLPDAWTTVGMVLVVGA 294
>gi|83950918|ref|ZP_00959651.1| transmembrane drug/metabolite transporter family protein
[Roseovarius nubinhibens ISM]
gi|83838817|gb|EAP78113.1| transmembrane drug/metabolite transporter family protein
[Roseovarius nubinhibens ISM]
Length = 310
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 85/269 (31%), Gaps = 6/269 (2%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + ++ + L ++ + + HRV W+ P +F + L + +G L
Sbjct: 21 WGGSFVFAEIALRELGPMTITLHRVGWAAPLLFVLVRLKRLALPRGWRIWGSYLVMGALN 80
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ + WG + + F V + L L R + L +
Sbjct: 81 NAIPFTLIFWGQTALEGGLASILNATTAVFGAVVAGLLLRDEPLLPRKLIGAALGVLGVA 140
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
+ + L + +AV +A +A ++ G + V
Sbjct: 141 VVVGADALGTLSLRNLAQLAVLAAALSYALASVWARVRLGDQPPLVNAFGMIAGSTVLMI 200
Query: 216 FSGGEHFFLG-----NIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
+ L + L + ++ ++RA + + ++ P
Sbjct: 201 PAALWSDGLPDLGLAPVTWAALAGLSLLSTVLAYLLYFAILRRAGAANLTLVTLLIPPFA 260
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I +L + + I F ++ + ++V
Sbjct: 261 IFLGWLVLGEALPASAWIGFAVIALGLLV 289
>gi|315656263|ref|ZP_07909154.1| probable permease [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315493265|gb|EFU82865.1| probable permease [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 364
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/347 (10%), Positives = 99/347 (28%), Gaps = 52/347 (14%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE--------------VISHRV 60
++ N + T +G + + + G+ PL++++ + + + + + R+
Sbjct: 5 TENNYVMNTKLGVITMLISATGMGLVPLFSRWATRTDMFDGTKGLNAGNSVGALMAAGRM 64
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ ++ K K ++ ++ + G ++ + L
Sbjct: 65 TMGIIFFVCIVLLTKKV-----QVWKELKVSPAIIMGGVMIGLSLGCYVTSTLLTTVANA 119
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL---------------------- 158
++ PV+ + L +F KE + +Q + + + +
Sbjct: 120 VLLIYIGPVVCIVLARIFRKEPMGVVQYVCLVAVFTGMLFGNQLIGFGDKGFFVDFNLAA 179
Query: 159 -----------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
I SGI + + + I
Sbjct: 180 STPEFPLAGLGNIFGFLSGIFYGASMFFNGYRKDADTAARGVWNFIAATVASGSLALILH 239
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + + L ++ + + + + GI+ Y
Sbjct: 240 LVGTIGHVPGWALDLHLTPFNWIGTVLLWIICGPIALGFLLVAGRNLPAADYGIIAYWEV 299
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + I + + + F +VV + + + S KN+ +
Sbjct: 300 PVALFIGLLIFGEALTINTVLGFILVVGGGMYPSISMLRQSRKNRKQ 346
>gi|294146673|ref|YP_003559339.1| putative permease [Sphingobium japonicum UT26S]
gi|292677090|dbj|BAI98607.1| putative permease [Sphingobium japonicum UT26S]
Length = 311
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 77/288 (26%), Gaps = 16/288 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M + LW + + + ++ L + R W L + A + ++
Sbjct: 1 MRAYAMLGMTMALWAGNAIVGRAMRGEIPPLTLAFSR--WMLALLIIAPFAWRRVMAQRA 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
++ A+ L + +A GF L + P V + + +R
Sbjct: 59 LIRRHWGAILFLGLAG--VAAFNGFLYSGLRHTTAANGLLLQGLIPTFVVIISRIAFGDR 116
Query: 143 LNHLQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVG 191
Q+ L L + + LL L W+ Y + P
Sbjct: 117 APLRQVAGIALSTLGVTFIVFKGELAEILRLRLGMGDLLVLCGCGAWAVYTACLRLRPAI 176
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
F + + + + + F+ +
Sbjct: 177 DPLAFLFVTFAIGALTMGIGALGEAQAIARMHWSGSVASAIAYVAIFPSIIAYMSFNAAV 236
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
A G PL V + IL +P+ +++ +++
Sbjct: 237 SHAGAGAAGQTISLLPLFGAVLAALILGEPLFGYHLAGMALILGGVLL 284
>gi|84385356|ref|ZP_00988388.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio splendidus 12B01]
gi|84379953|gb|EAP96804.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Vibrio splendidus 12B01]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 85/287 (29%), Gaps = 13/287 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F +WG + + + + +R +++ + + + + +
Sbjct: 3 YLLPFFTVCIWGANAIVNKLAASTIEPSAMSFYRWFFAMLILTPFCI----RPVMKQWAV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + ++ YA LT + + P+ISVFL L + ++
Sbjct: 59 IKPNLSKLAFLGFLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLHKSISS 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARKTIPVGSSEGFF 197
L I+ +L + L +M + + Y +
Sbjct: 119 LSIVGGVLSLSGLALMLGKGDPLFFMHQELTQGDGYMLIAAFVYASYCVLLKRWKMPISS 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + E L + ++ I
Sbjct: 179 WVVIYIQGLFAVAMLTPLWLTSEQLLPPQQAIPLIAYAAVAASILAPWMWVKAIDTIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + P++ IV + L + I+ I +V+ +++ +
Sbjct: 239 SSAMFMNLLPVVAIVLAATWLGEEINQFHIIGGVMVISGVILAQIKR 285
>gi|321313321|ref|YP_004205608.1| putative transporter [Bacillus subtilis BSn5]
gi|320019595|gb|ADV94581.1| putative transporter [Bacillus subtilis BSn5]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/288 (13%), Positives = 90/288 (31%), Gaps = 13/288 (4%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV A WG T E + L + R+L + A+ +K
Sbjct: 8 LFVLIAAFFWGTTGTVQALAPESATPLAFGAFRLLIGGSAMLLAVWISRE------LHVK 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N + + + + FF T T + P+I+ L LK+R +
Sbjct: 62 NWSWPLVFLAAVCMACYQPLFFTAVKETGIAVGTVIAIGSAPIIAGTLEWAVLKKRPRNS 121
Query: 147 QIIAALLIILSLLIMTLHSGI-----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
IA +L + ++ S + +A+ S + + + ++
Sbjct: 122 WWIATVLALAGCWLLFSDSSNVRIDVAGVLMALGAGASFAGYTLISKAMMKTQPPRATSA 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ + + + + + L + + +F+ G+ S
Sbjct: 182 VVFMISAILLTPLLWQSDISWIWTPRGLGTSLYIGLIATCAAYFLFAKGLTGVPASAAVT 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVF-GIVVIAMVVYLLPTVINS 308
+ PL + VF + + + + ++++ ++V
Sbjct: 242 LSLAEPLTASLLGVFFIGEMLSPSSWLGGIALMMLGLLVISAEPRKQK 289
>gi|315503470|ref|YP_004082357.1| hypothetical protein ML5_2684 [Micromonospora sp. L5]
gi|315410089|gb|ADU08206.1| protein of unknown function DUF6 transmembrane [Micromonospora sp.
L5]
Length = 320
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/306 (9%), Positives = 86/306 (28%), Gaps = 23/306 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGV-FFAIVYFS 75
+ +G + I + + + + L + S + V+ RV + + A++
Sbjct: 1 MRERSSVGLGLALLSAITFATSGTFARPLITGEWSAVAVVIARVGIAALVLAVPAVLALR 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G ++L+ + +A F A+ + ++ V+ V
Sbjct: 61 GRWTVLRRNAGSVVLF-----GLLGVATAQACFFNAVRYLPVGVALLLEYLGIVLVVGWM 115
Query: 136 SVFLKERLNHLQIIA--ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +R L + L L L++ +G + + A + G
Sbjct: 116 WLVHGQRPRLLTVAGSVTALCGLGLVLDLTGAGRLDPVGVLWGLGAGVGLAGYFVIAGRI 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS------------ 241
+ + + + V GG G ++
Sbjct: 176 DAGLPSVVMASAGMAVGAVALLLLGGLGALPLAAGTADVTFGGHRVSWLVPIAGLSLIAA 235
Query: 242 -FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ G + + T + ++ + +L + ++ +++ + +
Sbjct: 236 VVAYLAGVAGTRLLGARLSSFVGLTEVMFAVLIAWLVLDELPSLIQLAGGALILGGVALV 295
Query: 301 LLPTVI 306
+
Sbjct: 296 RADELR 301
>gi|316935817|ref|YP_004110799.1| hypothetical protein Rpdx1_4516 [Rhodopseudomonas palustris DX-1]
gi|315603531|gb|ADU46066.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris DX-1]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 75/285 (26%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + V + + R + ++ +
Sbjct: 17 YLLLSLTSLFWAGNIVLGRAVAGHVPPVTLSCARWVGAMVLLLPVAWPHLRH----DWRK 72
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
M+V SAT A++ + L Q P+ + RL
Sbjct: 73 LRAHWKLMIVLSATGFAINNALSYWGLQYTQALNALLMQSSGPLFVALWSLLLFGVRLTW 132
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+Q L +L +L + L L+ + Y P
Sbjct: 133 MQAAGIALSLLGVLTIILRGDFAALAAIELNRGDLMVAGALCAFGLYSALMPKRPATHPL 192
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L ++ G + + + F+ G+
Sbjct: 193 SLIVVTTGGGALLLLPFAAWEYASGVQPSADWLTAVTLAYVVIFPSMLAYLCFNRGVALI 252
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ V ++ +L + + + +VV + +
Sbjct: 253 GPNRSAPFLHLMPVFGSVMAIVLLGEKPELFHLAGYAMVVAGVFI 297
Score = 37.2 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 9/131 (6%), Positives = 39/131 (29%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + A G + + + + L +
Sbjct: 22 LTSLFWAGNIVLGRAVAGHVPPVTLSCARWVGAMVLLLPVAWPHLRHDWRKLRAHWKLMI 81
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + + +G++ + +M+ + PL + + S+ + + ++ +
Sbjct: 82 VLSATGFAINNALSYWGLQYTQALNALLMQSSGPLFVALWSLLLFGVRLTWMQAAGIALS 141
Query: 294 VIAMVVYLLPT 304
++ ++ +L
Sbjct: 142 LLGVLTIILRG 152
>gi|281205876|gb|EFA80065.1| hypothetical protein PPL_06887 [Polysphondylium pallidum PN500]
Length = 589
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 90/280 (32%), Gaps = 12/280 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ +G + + + ++ I L + + +LE+I R + L G ++
Sbjct: 85 KSRLGFILIVSSAFIYSIYSLLIGVVVKSGMHILEIILLRTVIGLMGGIIFLLLIGEN-- 142
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + +LVF Y + T + S LGS L
Sbjct: 143 ----PLGDKSKRLILVFRGISSTGSMVCIFYTISVLPLGDAIAMSCSTLLFSGVLGSTIL 198
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+ I +L I+ + I++ S + + + + + F +
Sbjct: 199 KEKWTKTYSICTILSIVGVFIISKPS--FIFGSVLGAFFQSVSNVFSRKIGKDTNPFIMV 256
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ +I L + + ++ + +L G+L + + ++ +
Sbjct: 257 VYYQSIAMLILLPVCLILN--VWRAPSLIEWFYLFCMGVLGFIFQGTANRAFQIENVAKM 314
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ YT + + + K+ D +++ V
Sbjct: 315 SPLTYTEIIFTYILQIIFFKESPDLFSIFGSICIILCAFV 354
Score = 41.0 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 17/247 (6%)
Query: 70 AIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
F +L + + +L + F TPV
Sbjct: 339 LFSIFGSICIILCAFVSPKEKRLLLSVRGLFGTFAVASVFFTFTVLPLSDAVCVSFTTPV 398
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH-----------------SGIPLLSL 172
+ L + LKE+ ++ I+ +L + + I++ +
Sbjct: 399 FTAALACIVLKEKWGYIDAISTILSFIGVGIISKPSFIFGSSVKQDSSEPDSGLRFIYIS 458
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+ A + S + M + + F + N+ D+L
Sbjct: 459 IGLIGSFFSACAYVAVRKIGSGTNALVMVSYFSSVAILLTLPASFLLQSFKIPNLIDSLL 518
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
LIG G+ + +++ K + M YT + ++ V ILK+ D + I I
Sbjct: 519 LIGMGVSGLGYQAFLNKSLQKEKAAKASAMSYTQIIFSLLMEVTILKERPDLLTIIGTLI 578
Query: 293 VVIAMVV 299
++ +
Sbjct: 579 ILSCSIF 585
>gi|206564167|ref|YP_002234930.1| hypothetical protein BCAM2331 [Burkholderia cenocepacia J2315]
gi|198040207|emb|CAR56190.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 295
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 87/276 (31%), Gaps = 14/276 (5%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + + V+ +I+ RV + + + V
Sbjct: 10 AAIWGASFLFMRMGAPEFGVVPLIALRVAIAAVLLSPVL------RDAQARHEFRAHVVP 63
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ V A+ + YA L S TP+ + + V+L+ L Q I
Sbjct: 64 LFVVGIANSALPFCLLTYAALFVTAGTDSILNATTPLWTAIVAYVWLRAPLTRPQAIGLA 123
Query: 153 LIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L ++++ ++ A+ T S A + ++ F+ +
Sbjct: 124 LGFAGVVVLAGSALGTGTPGAPSAIAAAMLATLSYGFAAHYSKRKLANVRPFVSAFGSQL 183
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
A +V H + ++ + + + ++ ++ A + +
Sbjct: 184 FAAVALVPLALPMWPHGPVHASAWIAVVLLGAICTAVAYLLYFGLLRSAGAQYAASVTFL 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ +V L + I I+++ +
Sbjct: 244 IPVFGVVWGAIFLHETITVQTVAGCAIILLGTALAT 279
>gi|290968897|ref|ZP_06560434.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
gi|290781193|gb|EFD93784.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 82/281 (29%), Gaps = 12/281 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + + + + + + + + L + E+ R L+S + +
Sbjct: 6 KGVICMIFSALSFSVQNMIVKELSYTMGTGEIAFFRGLFSSIIILALMKAQGIHF----- 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + G L+F + AL S ++ + +VFLKE +
Sbjct: 61 ---SKEDRGTLLFRGVMGGSGMICLFIALGGMPLADVSILSQLSAFFVMIFAAVFLKEVM 117
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS---EGFFIEM 200
++ ++I++ ++ ++ A S G +
Sbjct: 118 PRNSVLPLIIIVVGACLVVRPWNFSSFNVYSVFVLIQAICAAAAYTTISKLTGSGKHHQY 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ + + G HF + + + I G++ + + A V
Sbjct: 178 EIVFYFLVCACLSGIILMGGHFQMPDEWEWFLYIMLGIITVIAQILMTDAYAYANPVIVS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ Y A + + + + ++ +
Sbjct: 238 FVAYIAVFFNAFWGFVVFNEMMTFMTVAGGLCIIGGSMYLT 278
>gi|156846433|ref|XP_001646104.1| hypothetical protein Kpol_543p75 [Vanderwaltozyma polyspora DSM
70294]
gi|156116776|gb|EDO18246.1| hypothetical protein Kpol_543p75 [Vanderwaltozyma polyspora DSM
70294]
Length = 394
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/321 (11%), Positives = 97/321 (30%), Gaps = 35/321 (10%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVS---------VLEVISHRVLWSLPGVFFAIVYFSG 76
G + +Y + + T+ LE L+++ R++ + G+ +
Sbjct: 56 GIFLLIVSYFFNSVMQVSTKVLETFGDKPDEDRIKPLQILLIRMVITSIGIIVYVYMNRR 115
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + NP+ L+ + ++L+ F+ P ++FL
Sbjct: 116 TIPYVP--FGNPQVRQWLILRGIFGFIGVFGMYFSLMYLTISDAVLISFMAPSFTLFLAW 173
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL------------------------ 172
L E + L+ + ++L + +L + S I S+
Sbjct: 174 FVLGEPFSKLEGVGSILSLTGVLFIVRPSFIFGGSIENEKSHDLSIATGRTRFIATTIAL 233
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
A + S + I + + + + + + + +
Sbjct: 234 FGAASLSGVYIVIRFIGAKAHAIMNVSYFSVVTGIVSLLGVLFIPSMKFQVPEGSTEWIL 293
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
G+ + + GI++ + +M YT + I V + + + +
Sbjct: 294 FCTIGVCGFIHQLLLTMGIQKVRAGKGSLMSYTQVIYAIFWDVTLWGRWPNAWSIFGMFL 353
Query: 293 VVIAMVVYLLPTVINSGKNKT 313
++ + + + + T
Sbjct: 354 IIGSTIWVIRLKEQEVSRQST 374
>gi|111020605|ref|YP_703577.1| drug/metabolite transporter protein [Rhodococcus jostii RHA1]
gi|110820135|gb|ABG95419.1| probable drug/metabolite transporter protein [Rhodococcus jostii
RHA1]
Length = 311
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/302 (10%), Positives = 87/302 (28%), Gaps = 11/302 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAI 71
+ + + + + +G+TP + + VS ++ R L +
Sbjct: 1 MGDSTTRGRSAVAWGCGAASAVAYGLTPTFAAIGYAGGVSPAVLVCLRSLVGAALLLLLA 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ AVG+ + + F A+ + + P+
Sbjct: 61 WSTGRLTGVTW-----KSAVGLCFICGPLFGIQLLCFFAAVRVTGAQIAVVIVHIYPLFV 115
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKT 187
+ L V + R++ Q++ AL + + ++ + + +
Sbjct: 116 MALVWVLTRNRIHRGQLVLALAMSGGIALVAGAGSSAVAVNGAVLALLSAAGYALYLVVG 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ ++ A G+ + L LL
Sbjct: 176 ERWVHQVSPVAAGGLASLGAGIATGTIAVVDGQSWTFAPSGWGSILFQGLLLMPIGIGCS 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ ++V ++ P++ ++++ +L + + V+ +V+IA
Sbjct: 236 FIAVRALGSASVSLLGLLEPVVGVLAAQILLGEQLSPVQWAGMAVVLIASAALPWMREKR 295
Query: 308 SG 309
Sbjct: 296 PR 297
>gi|121594895|ref|YP_986791.1| hypothetical protein Ajs_2557 [Acidovorax sp. JS42]
gi|120606975|gb|ABM42715.1| protein of unknown function DUF6, transmembrane [Acidovorax sp.
JS42]
Length = 294
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 80/278 (28%), Gaps = 7/278 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ +W I + T+ L+Q EV R + L + + G
Sbjct: 11 RAVWLMVAVTFMWSIAGVVTRHLDQARSFEVTFWRSFFMLLSLCVILPVLQG----RALL 66
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + S +V + F+ A+L + + P+++ L F+ +
Sbjct: 67 ANLRRGGRAVWISGVCWSVMFTAFMIAILLIPVASVLVTMAIGPLLTALLARAFIGYHIA 126
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI---PVGSSEGFFIEMC 201
A L + M L + + V A +G +++
Sbjct: 127 PRTWCAIALAGAGIGWMYGSGISGLSVVGVLVALCVPVAAAVNWVVVQHSQRQGHAVDLV 186
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ F +L + + + + Y + K + +
Sbjct: 187 PAVLLGAALSALATLPLAWPFQATARDLSLLALLGLVQLAIPCVLVVYCARVLKAPEIAL 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + I+ + + D + +V+ A+V
Sbjct: 247 LGLLEVIFGILLAWVGAGERPDPAVLMGGALVIGALVF 284
>gi|89055134|ref|YP_510585.1| hypothetical protein Jann_2643 [Jannaschia sp. CCS1]
gi|88864683|gb|ABD55560.1| protein of unknown function DUF6 transmembrane [Jannaschia sp.
CCS1]
Length = 289
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 8/292 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ PT G + A L+ + L V++V+ R + V +
Sbjct: 2 SKLTPTTQGIVLFLSAIFLFSAMDAVAKTLTTRFDVMQVVWARYAGQMVVVALILWPRLF 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + L F +L + + + PV+ +
Sbjct: 62 RLIRTAHPGLQLLRSAL-------LFAATWCFFTSLSFMEIASATAVMNIHPVLLTLGAA 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+ L ERL +II L + LI+ L A+ + +C+A +
Sbjct: 115 LVLGERLGARRIIGIALALTGALIILRPGTEVLSWSALLPLAAGFCYASYALTTRFLGRD 174
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ A+ V + D +G G+L + +F + A+
Sbjct: 175 EPILTSFLYTAIIGTVAASALVVPVWDAPAPTDWAIFLGIGILGAAGQFLFIRAMIVAEA 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ Y+ + + + + + D + ++V A V +
Sbjct: 235 GAIAPFGYSGVVFSTIWGLVVFSEVPDGPTLLGAMVIVGAGVYVWYRENRAT 286
>gi|86355937|ref|YP_467829.1| putative transporter, permease protein (related to regulator
protein pecM) [Rhizobium etli CFN 42]
gi|86280039|gb|ABC89102.1| putative transporter, permease protein (related to regulator
protein pecM) [Rhizobium etli CFN 42]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 90/279 (32%), Gaps = 16/279 (5%)
Query: 27 TLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A +WG T + T FL Q L V + A+ L +++
Sbjct: 11 VLITAVAPAIWGSTYFVTTSFLPQGYPLTVA----------MLRALPAGLLLLLIVRKLP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A + W + G + + V P+I + L +FL + + +
Sbjct: 61 RGVWWGRAFILGALNFSFFWAMLFVSAYRLPGGVAATVGAVQPLIVIALSRLFLGKPIRY 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-----SAYCFARKTIPVGSSEGFFIEM 200
L ++A L+ + + ++ L L + +A A+
Sbjct: 121 LAVVAGLIGMSGVALLVLTPNAALDPVGVAAGLAGAVSMAFGTVLSRHWEPPVSSLTFTS 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + V + +F + ++ G+ R + S
Sbjct: 181 WQLTAGGILLVPVAFVLEPGLPMPTAANILGIAHLGLIGAAFTYLLWFRGLSRIEPSAAA 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + +P++ + L Q + + F +V+ ++ +
Sbjct: 241 SLGFLSPVVATLLGWLALGQSLTPAQIAGFAMVLASVWL 279
>gi|78044363|ref|YP_361039.1| hypothetical protein CHY_2226 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996478|gb|ABB15377.1| putative membrane protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 308
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 94/285 (32%), Gaps = 18/285 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVIS-HRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + +LW + + + + V + R L S + +Y
Sbjct: 10 YILLVIVAMLWASAFVAAREVVREVPPVVAATLRFLLSGLIIMPLALYREKNRR-----Y 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +++ T + ++ FF + + +S V P++ L ++FLKE+L
Sbjct: 65 GLKNYLYLVIMGFTGIFLYNLFFFFGVKFNPASDSSLVIAVNPIVVSLLAALFLKEKLTF 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTIPVGSSEG 195
+I+ ++ + +L++ AV A +G+
Sbjct: 125 EKILGLIISFIGVLLVISEGHPLTYFQGPLEPTRFLLFGAVISWAIYSVISKKVMGTVSP 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFF--LGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ A+F++ W + L + F ++ GIK+
Sbjct: 185 LATTAFSIFFGAIFFLPWGIGEMQHVNMLKISLKSYLLIIHLAVFPTVLAFFWWNLGIKK 244
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ ++ S L + I R + +V++ ++
Sbjct: 245 VGAQKSALFINLIPIFTLILSAVFLGEKITLPRVLGGLLVILGVL 289
Score = 38.0 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 35/101 (34%)
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ + ++ ++ G +I F +G+K S ++
Sbjct: 44 FLLSGLIIMPLALYREKNRRYGLKNYLYLVIMGFTGIFLYNLFFFFGVKFNPASDSSLVI 103
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P+++ + + LK+ + + + I I +++ +
Sbjct: 104 AVNPIVVSLLAALFLKEKLTFEKILGLIISFIGVLLVISEG 144
>gi|27380832|ref|NP_772361.1| hypothetical protein blr5721 [Bradyrhizobium japonicum USDA 110]
gi|27353997|dbj|BAC50986.1| blr5721 [Bradyrhizobium japonicum USDA 110]
Length = 321
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/315 (11%), Positives = 84/315 (26%), Gaps = 6/315 (1%)
Query: 2 GKGATKKEYSKGLSKENAS-LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHR 59
G G T S LS A+ + +F W T + L+ + + IS R
Sbjct: 7 GAGRTTASASTPLSSMAATGARSWRDYALLFALACCWSSTYPLAKLALDTIPPITFISAR 66
Query: 60 VLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFL 119
L + +F + + K ++ + L + W
Sbjct: 67 SLIAAAFLFAILWIRGVRIPTDAKAWKLFATQQLINSTFPFLVITWSQQYVPASNTVVLA 126
Query: 120 TSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG----IPLLSLAIA 175
++ F + S+ I+ + + + L + +++ +A
Sbjct: 127 STTPIFAFLITSLITRHEPATLLKLAGAILGLAGTVAIVGLDALGGFGREIVAEIAILLA 186
Query: 176 VTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
A +L + ++
Sbjct: 187 TISFACATIFGLRLSDYDPMVVAAGSLLFGGLILLPPSLIIDQPWTLHPTFQAIVATIVM 246
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ ++ +F + R T Y + + SV +L + + + + +V+
Sbjct: 247 GIVSSALGLMLFYVCLGRLGTLTTNAQGYLRIPIGVGLSVVLLGESVPSNLALGLLLVMA 306
Query: 296 AMVVYLLPTVINSGK 310
+ +P +
Sbjct: 307 GVAAMTVPAERLKLR 321
>gi|150392392|ref|YP_001322441.1| hypothetical protein Amet_4714 [Alkaliphilus metalliredigens QYMF]
gi|149952254|gb|ABR50782.1| protein of unknown function DUF6, transmembrane [Alkaliphilus
metalliredigens QYMF]
Length = 307
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 77/298 (25%), Gaps = 16/298 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LWG+ + + L + L + + R + F + L
Sbjct: 6 IGIGLIVATLWGLNFIAIKLGLADMPPLLLATIRFMVVCIPAIFFLPKPPVDWRWLIALG 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
S +F + ++FLG + +
Sbjct: 66 LTLNV------GQFAFLFMGVKLGMPAGLSSLVHQSQVFFTLVIATLFLGEQWKWNHVVG 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L I ++++ + + IA + F + V+
Sbjct: 120 LIIATGGMVVVGSQQGGSMTAVGFWLTLIAAASWGIGNVIMRRTTKDAPPFSMLSLVVWA 179
Query: 206 PALFYVVWNGF---------SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + F L I + + + ++ +
Sbjct: 180 GGIAILPLGLFSLYFEGATAWKLAWDSLNWITIVSIIYLAYFASLGGYGLWGRLLSCYPA 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ V P++ + S+ L + + I +V++ + V + +N NK +
Sbjct: 240 AVVSPFSLLVPVIGMSSAALFLNETFSLWQIIGALLVMLGLAVNVFGGRLNKNANKKR 297
>gi|331694546|ref|YP_004330785.1| hypothetical protein Psed_0669 [Pseudonocardia dioxanivorans
CB1190]
gi|326949235|gb|AEA22932.1| protein of unknown function DUF6 transmembrane [Pseudonocardia
dioxanivorans CB1190]
Length = 316
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/302 (7%), Positives = 76/302 (25%), Gaps = 24/302 (7%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ T G + + +G++ + L S + R+ G +V
Sbjct: 2 SLRSRTTTGVALGLVSALSFGVSGPVAKALIEAGWSPAGAVLVRI----GGAAAVLVVVL 57
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+L++ A +A + A+ T + ++ PV+ +
Sbjct: 58 AVARPGVLAAVRADGPALLLYGAFAVAGVQVAYFSAIRTLPVSIALLLEYLGPVLVIGWV 117
Query: 136 SVFLKERLNH-----------------LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW 178
+ + + +L + + +
Sbjct: 118 WLVRRRPPDRTTLVGAVAAVVGLVLVLQVWSGGVLDPGGVAWGLFGAVCWASYFLVVDRA 177
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT-LFLIGYG 237
VG G + + V+ + ++ +
Sbjct: 178 GTRTPPLVLTGVGMVVGTVAVVLCGLVGITPIVLAVPPTAPVLLAGADVGWLLPAVTLAL 237
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + + R + ++ + + + +L + + ++++ +
Sbjct: 238 VCALIAYLAGVGAVSRIGATRGSLVALLEVVFSTLITWLLLGELPGPFQLAGGALILLGV 297
Query: 298 VV 299
V+
Sbjct: 298 VL 299
>gi|323177833|gb|EFZ63417.1| rarD protein [Escherichia coli 1180]
Length = 221
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 101 LAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLI 160
+ +W FI+A+ S YF+ P++++ LG +FL ER +Q +A +L I +L+
Sbjct: 9 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLV 68
Query: 161 MTLHSGI-PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
G P+++L +A +++ Y RK I V + G IE L A Y+ S
Sbjct: 69 QLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSST 128
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
H + L LI G++ + F+ R +LST+G +Y P LM + +V
Sbjct: 129 SHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYG 188
Query: 280 QPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + + F + +A+ ++++ + +
Sbjct: 189 EKPGDDKMVTFAFIWVALAIFVMDAIYTQRRK 220
>gi|307544169|ref|YP_003896648.1| hypothetical protein HELO_1579 [Halomonas elongata DSM 2581]
gi|307216193|emb|CBV41463.1| hypothetical protein HELO_1579 [Halomonas elongata DSM 2581]
Length = 306
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 83/277 (29%), Gaps = 13/277 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A ++W Q + ++ + R L +L + + + +
Sbjct: 11 GAVLIWSGNMTINQLTVGAIAPSSIAFLRWLLALAVLTPFVA----PAAWRYRDTLRREW 66
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ V + + G A T + P+++V L ++ L+E + I+
Sbjct: 67 PKLAVLGLLGMGLWQGLAYVAAETTSATNMGILAAMVPLLTVLLSALILREPPSVGGILG 126
Query: 151 ALLIILSLLIMTLHSGI--------PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L + + ++ H + V + Y + E +
Sbjct: 127 GLFALCGVALLLGHGNPLSLLELEIASGDALMLVAATCYALYGVMLKRWPLELPPWVLLY 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ + G + + L + ++ I+R S I
Sbjct: 187 GQVICAVLILLPPYLLGPMTPVTSSNAGLIAYAGIPASIVTTYLWMLAIRRIGASRASIF 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
PL + ++ +L + + +V+ +++
Sbjct: 247 INLMPLFSALIAMAVLGERLALFHVFGGALVLAGVIM 283
Score = 40.7 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 37/130 (28%)
Query: 175 AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI 234
AV + + VG+ I + + + + +
Sbjct: 12 AVLIWSGNMTINQLTVGAIAPSSIAFLRWLLALAVLTPFVAPAAWRYRDTLRREWPKLAV 71
Query: 235 GYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVV 294
L + + + +GI+ PLL ++ S IL++P + +
Sbjct: 72 LGLLGMGLWQGLAYVAAETTSATNMGILAAMVPLLTVLLSALILREPPSVGGILGGLFAL 131
Query: 295 IAMVVYLLPT 304
+ + L
Sbjct: 132 CGVALLLGHG 141
>gi|300117699|ref|ZP_07055480.1| transporter, EamA family protein [Bacillus cereus SJ1]
gi|301054561|ref|YP_003792772.1| drug/metabolite exporter family transporter [Bacillus anthracis CI]
gi|298724929|gb|EFI65590.1| transporter, EamA family protein [Bacillus cereus SJ1]
gi|300376730|gb|ADK05634.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
biovar anthracis str. CI]
Length = 303
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNSLTWPVDTLSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 294
>gi|229118261|ref|ZP_04247617.1| Transporter, EamA [Bacillus cereus Rock1-3]
gi|228665091|gb|EEL20577.1| Transporter, EamA [Bacillus cereus Rock1-3]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 94/288 (32%), Gaps = 14/288 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WGI ++ L + + +E + R++ + P + + L ++
Sbjct: 8 LLILSVVMIWGINYTIAKYGLVEFTAIEFTAIRMMAAAPLLLLLTFFIEKSL-----YVE 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++V S + ++ F+ + S ++P+ + +E+ +
Sbjct: 63 RKDIPRLIVVSFVGIVLYQTLFMETVKYTSATNASLLISISPIFTTLFAVFLKQEKFSSR 122
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++I +++ + ++ + G + + A I S+
Sbjct: 123 KLIGSMIAFVGAALVLVAGHSLASSFYGNGIGMITSICWGLYPVLAGPLIKKYSALRVTA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ L + + L + F ++ G+++ S
Sbjct: 183 WSALVGAIPLLLLSGPHVFVMPFHITKGMTLFALLYSIFFVTVFGLVMWYIGVQKIGASH 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y P++ ++ + + I + I I+ + L V
Sbjct: 243 TMVYMYITPIVAVLFAAIWANESISLQQMIGGIIIFFGLWFVKLEKVK 290
>gi|224583513|ref|YP_002637311.1| hypothetical protein SPC_1725 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468040|gb|ACN45870.1| hypothetical protein SPC_1725 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|323130268|gb|ADX17698.1| Uncharacterized inner membrane transporter yedA [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
Length = 308
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 85/288 (29%), Gaps = 4/288 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 7 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 65 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 124 RKLEWVGIAIGLAGIILLNSGGNLSGNPWGAILILIGSMSWAFGSVYGSRIALPVGMMAG 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 184 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y P++ ++ + + + V G++V A+V+ L +
Sbjct: 244 ATSYAYVNPVVAVLLGTGLGGERLSPVEWAALGVIVFAVVLVTLGKYL 291
>gi|156976450|ref|YP_001447356.1| hypothetical protein VIBHAR_05223 [Vibrio harveyi ATCC BAA-1116]
gi|156528044|gb|ABU73129.1| hypothetical protein VIBHAR_05223 [Vibrio harveyi ATCC BAA-1116]
Length = 305
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 86/299 (28%), Gaps = 17/299 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + + + +
Sbjct: 3 YLLPFFTVMIWGGNSIVNKMAASAIEPSAMSFYRWFVAMVLLTPFCL----PAVIKQRHV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT + + P+ISVFL L + ++
Sbjct: 59 IRPYLAKLAFLALLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSISM 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
L + ++ + L M H I +A A
Sbjct: 119 LSVAGGVISLGGLAFMLGHGDITYFLHQDMTQGDSLMLLAALCYAIYCVLLKRWKMPFSS 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + S +P + + + ++ I+
Sbjct: 179 MTLVYMQGFFSLVMLAPLWLSSDQLLPSQSALPLIAYAGIAASIFAP--LMWVKAIELIG 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + P++ + + +L + + I +V+ +++ + +
Sbjct: 237 ADSSAMFMNLMPVVSVALASTMLGEEVHVYHIIGGMLVISGVILSQIRSARRFNHRARS 295
>gi|90418066|ref|ZP_01225978.1| putative membrane protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337738|gb|EAS51389.1| putative membrane protein [Aurantimonas manganoxydans SI85-9A1]
Length = 265
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 78/271 (28%), Gaps = 7/271 (2%)
Query: 40 TPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSA 98
+ ++L + VLE++ R + + + G + + K G+ +
Sbjct: 1 MDTFGKYLTGELPVLEIVWARYFFHAILMTAWLARTRG------TSFLHSKRPGLQLARG 54
Query: 99 TILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL 158
L + + F PV+ L +FL ER+ +I A L + +
Sbjct: 55 AALLCATTLMYVSFAHVPLADATAVQFFAPVLVTVLSVIFLGERIGVPRIAAVLAGFVGV 114
Query: 159 LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
L++ + SA + + + G L V +
Sbjct: 115 LLIVRPGFADTSPYLLLPLLSAVILSGYFLMTRALSGPQENAATLFNTTAVGAVLLTIAV 174
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ P ++ G L + G A S + Y + SV +L
Sbjct: 175 PFVWETPTWPVFAMMVTIGTLGALGHFCIVQGFAYASASALSPFLYAQVFFASIYSVTLL 234
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ I++ + +
Sbjct: 235 GDPLSWNFLAGAAILIASGLTIWWRENRTRR 265
>gi|27379421|ref|NP_770950.1| hypothetical protein blr4310 [Bradyrhizobium japonicum USDA 110]
gi|27352572|dbj|BAC49575.1| blr4310 [Bradyrhizobium japonicum USDA 110]
Length = 291
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 88/292 (30%), Gaps = 5/292 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G V A I W P +T+ L ++ R +++ + +V G
Sbjct: 3 QPRSERGLGIALVIAAAIAWSTAPFFTRLL-PFDPWTILFWRGVFAGSLISVFLVAMQGR 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+L + + ++ + S A+ FI AL + P ++ L +
Sbjct: 62 AALWQLVVPGRGSLLVASLS----ALGMISFIPALQMTNVMNVAVLIATQPFVAAALAWL 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+L E +IA+L+ ++I +A++ V
Sbjct: 118 WLGEAATWRTLIASLIAFAGVVITVGGVQAGADLGGLALSCLMVLAISSMTVVIRRHRQT 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ A+ + + + +G + + L + + G++
Sbjct: 178 SMVAAAALSNFMGSLVSLPFAHDIAHVGGNDLAILAMFGCLQVALGLTFYMLGLRLLPSG 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ LM ++ I +V+ A+V +
Sbjct: 238 QASLIATLETPLMPFWIWVAFREVPAVHALIGGALVIGAVVADIAGDARKRR 289
>gi|152975792|ref|YP_001375309.1| hypothetical protein Bcer98_2043 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024544|gb|ABS22314.1| protein of unknown function DUF6 transmembrane [Bacillus
cytotoxicus NVH 391-98]
Length = 304
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 93/300 (31%), Gaps = 17/300 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLVITFMLERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++V ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVVVGIVGTTLYQTLFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV----------TWSAYCFARKTIP 189
+ER + + ++L ++ L + A +
Sbjct: 116 QERFSMKIQVGSVLSFGGAALVLLTGHTSQSTYEYAWLGNGIGLVAAIAWGWYPILAQPL 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI-PDTLFLIGYGLLNSFVFCIFS 248
+ + I + V++ F + ++ F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFHASALTWPADLLSWGSLTYSIVFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
GI + + V + Y PL ++ + + + I ++ I ++ I + V T+ S
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAMTIGERITIMQLIGGLVIFIGLYVVKKGTIKKS 295
>gi|327441533|dbj|BAK17898.1| permease of the drug/metabolite transporter superfamily
[Solibacillus silvestris StLB046]
Length = 309
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 96/306 (31%), Gaps = 15/306 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G FV +G TP++ + S+ ++ +++ S ++ G
Sbjct: 1 MKINKGVFFVLLGAGCFGFTPVFAKLGFGHGYSLGQINLVQMVISFLLLWSIAFLKGDGT 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L K + ++ + + + F+ A+ L F I + VF
Sbjct: 61 KGL-----TKKNIIPIMITGCFIGLTSIFYYGAMQYLPASLAIILMFQFVWIGILFEWVF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLL--------SLAIAVTWSAYCFARKTIPV 190
K + + I + +LI++ + + + ++ A
Sbjct: 116 NKIKPAPITIFSIVLILVGVFFASNILNGDMQGLPIKGFVMGILSAFTYAAFIFFSGKVA 175
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ + + F L T ++ G
Sbjct: 176 VDVNPLTRTSLMVTGSTILVFILFMKDIPTVFPLEGSLVTSAAGVSLFGAVLPPLFYAVG 235
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ + I+S+ IL + + V+ + ++++A+V+ + I K
Sbjct: 236 APLISGGLANILTSVELPVAILSASIILAETVKAVQWLGIVLILVAIVLNEIGPNIIRMK 295
Query: 311 NKTKKS 316
++K++
Sbjct: 296 KRSKRT 301
>gi|323467426|gb|ADX71113.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus helveticus H10]
Length = 323
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 98/303 (32%), Gaps = 19/303 (6%)
Query: 1 MGKGATKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSV----LEVI 56
M +GA+ + + + + + T A ++WGI+ L+ + L +S + +
Sbjct: 1 MIEGASLELGKRRMVTQ---KTRRLWTFLAAMAAVMWGISGLFAKGLFNISPKMTPMWLT 57
Query: 57 SHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQ 116
R++ S + A +K A+ +L + L F+ +
Sbjct: 58 QVRLIISGIVLLLASSGLKH--KPIKTLKNKHNALVILSYGIFGLLPVQLFYFMCIKVAN 115
Query: 117 GFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV 176
+ + F+ P + ++ K+ + L IIAA+ L + +++ H L++ A
Sbjct: 116 ASIATILQFIGPFFVLGYLTITHKQVMRRLDIIAAICAFLGVFLLSTHGQFDHLAITPAA 175
Query: 177 TWS--------AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ A V + + L V+ +
Sbjct: 176 LFWGLLSAVGEAAYTLIPVNIVKKESSMVVTGWGMLFAGLSLVIIQPQFQAIPNK--SEV 233
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
+ F I + ++ ST +++ P + SV + + + +
Sbjct: 234 WLYTAAVVIIGTIIPFQIMANALRYVVPSTASLLDAFEPFSATIGSVLVFGLIMMPMDWV 293
Query: 289 VFG 291
Sbjct: 294 GAV 296
>gi|55823422|ref|YP_141863.1| permease [Streptococcus thermophilus CNRZ1066]
gi|55739407|gb|AAV63048.1| permease, putative [Streptococcus thermophilus CNRZ1066]
Length = 296
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 101/297 (34%), Gaps = 21/297 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G L IL+G++ ++T+ + Q S L +IS R + + V ++
Sbjct: 1 MKNKIILGCLAAAACEILFGLSFIFTKSITAQASGLALISWRFVTAFFFVNLYLLTKRQ- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + ++ + +++ + + PV+++ + S+
Sbjct: 60 ----KVVINGRNIKPLIRIAILNPIIYFICETIGIRMTTASESLAFLACIPVVALIMSSL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVG 191
LKE + Q++ ++ ++I +G + S +
Sbjct: 116 ILKEWPSRWQVVGVATTLIGIIIAVFAAGGSTNFSLVGYFILGLAVVSYALYCVDVEKAS 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGG---------EHFFLGNIPDTLFLIGYGLLNSF 242
F I +LA L + ++ + L +
Sbjct: 176 QFTSFEITYFMLASGCLTFGLFALSHSFLAGNLKELLTLPWSNPKFAITILYQGLGCSVI 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ I ++ + ++ I+++V L +P ++ + +VV+ + V
Sbjct: 236 GYILSNFAIATIGVNRTASFIGISTIISILAAVVFLGEPFSQLQILAGILVVLGVYV 292
Score = 37.2 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 34/103 (33%)
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A F+V + + + + L F + GI+ S
Sbjct: 41 WRFVTAFFFVNLYLLTKRQKVVINGRNIKPLIRIAILNPIIYFICETIGIRMTTASESLA 100
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P++ ++ S ILK+ + + +I +++ +
Sbjct: 101 FLACIPVVALIMSSLILKEWPSRWQVVGVATTLIGIIIAVFAA 143
>gi|84687399|ref|ZP_01015277.1| membrane protein, putative [Maritimibacter alkaliphilus HTCC2654]
gi|84664557|gb|EAQ11043.1| membrane protein, putative [Rhodobacterales bacterium HTCC2654]
Length = 290
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 82/285 (28%), Gaps = 9/285 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L L + L +V V + I R V ++ ++ K
Sbjct: 13 KGILLYMSGIFCMATMDLLAKILSQEVHVTQTIWARYAGQTIIVTIWLLPTLKTVARTK- 71
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
G+ + L + F +L + + P+ ++FL ER
Sbjct: 72 ------YPGLQFVRSMSLLMGTSLFFLSLTYLGLAEATAIMDINPIFITLGAALFLGERF 125
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + ++ L++ A +A +A + L
Sbjct: 126 GPRRAFGVVAALVGALVIIRPGTEVFSPAAFLPLIAATGYATFILLTRKVGHDEDPRTSL 185
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL + + + + ++ G L + ++ A+ S +
Sbjct: 186 LYAALLGAIVTSVIVPFFWTVPGPKEIALMLAIGALGALGQLFLIQAVRFAEASAIAPFS 245
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y L+ + + + D I I+V + +Y+ +
Sbjct: 246 YVGLLIAAIWGALVFGEYPDLATWIGGAIIVAS-GLYIWHRERAA 289
>gi|84516084|ref|ZP_01003444.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
gi|84509780|gb|EAQ06237.1| membrane protein, putative [Loktanella vestfoldensis SKA53]
Length = 288
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 99/287 (34%), Gaps = 9/287 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T +++ A I + + + + ++ E++ R L + V Y
Sbjct: 2 SNTTQAAVWMIGAIIAFTTMAIAGRSVSVELDTFEIMLFRSLIGIIIVLAIAAYTGAIRQ 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ L+ + F+ L + YA++T F TP+ + L + L
Sbjct: 62 IRFRKLRLHLMRNICHFTGQNL------WFYAIITIPLAQVFALEFTTPIWVLLLSPLIL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ERL + +IAAL+ +LI+ + +A A FA I
Sbjct: 116 QERLTGIGLIAALIGFAGILIVARPDPGNMSPGLLAAAGCAVFFALTAIFTRKLTRTEGI 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFL--GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+L L ++ S G + + +++ + + + A S
Sbjct: 176 TSILFFLTLTQAIFGLLSAGYDGDIAVPSALTLPWVVVISIAGLVAHFCLTKALSIAPAS 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
TV +++ + V + + +P++ + ++ + + +
Sbjct: 236 TVMPLDFVRLPAIAVVGMILYDEPLELLVFAGAALIFLGNFINIRHA 282
>gi|327267267|ref|XP_003218424.1| PREDICTED: transmembrane protein 22-like [Anolis carolinensis]
Length = 410
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/306 (11%), Positives = 92/306 (30%), Gaps = 22/306 (7%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + + + G L T+ V LE+I R + + V Y
Sbjct: 100 QSRKTWAILLGSALAHGCVALITRLASDRSKVPSLELIFIRSVLQVFSVLVVCYY--HED 157
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +I + F I + T V S L +
Sbjct: 158 PFGPKGHRLRLFFYGVCNVISITCAYTSFAIVPPSNGTTMWRAT----TTVFSAILAFLL 213
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------------GIPLLSLAIAVTWSAYCFAR 185
+ ER+ ++ +I I+ + ++ + + ++ + +
Sbjct: 214 VDERMAYVDVITVAGSIVGVCLVMIPNIVDEENSLLNIWKEAFGYTMTVMAGLTTALSMI 273
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+ + + + V F E N +L+G + ++ F
Sbjct: 274 VYRSIKDDVSMWTALFTFGWTGTVWGVSTMFFLQEPIIPLNGESWSYLLGICICSTVAFL 333
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y + + + V +++ ++ ++ + +L+ I I++I++ +
Sbjct: 334 GVYYALSKFHPALVSTVQHLEIVIAMILQLLVLRIFPSIYDLIGGAIIIISVFFLAWYKL 393
Query: 306 INSGKN 311
K+
Sbjct: 394 SWKQKH 399
>gi|304405949|ref|ZP_07387607.1| protein of unknown function DUF6 transmembrane [Paenibacillus
curdlanolyticus YK9]
gi|304345192|gb|EFM11028.1| protein of unknown function DUF6 transmembrane [Paenibacillus
curdlanolyticus YK9]
Length = 294
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 93/288 (32%), Gaps = 14/288 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
++ ++WGI +++ L + R L + + L L + L
Sbjct: 12 LFYLVFLILMWGINWPLSKYALAFTPPILFAGLRTLIGGALLILIALPRWKQLRLRETWL 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++GF L L S F+ PV+ ++L E +
Sbjct: 72 ------YYVFSALLSIVFYYGFQTVGLQYMPAGLFSAIVFLQPVLLGLFAWMWLGEGMYT 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGFFI 198
+++ LL + M++ S+ A++W+ K +
Sbjct: 126 RKMVGLLLGFGGVAAMSIGGLEGGTSILGILLALGSALSWALGTVYIKRQADKVDSLWMT 185
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
M ++ + + L + + + + I + S
Sbjct: 186 AMQIMIGGIVMTAYGSTVESWSEVRWTAAFLYDTLFISVFVIALGWLTYFKLIGSGEASK 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
VG + P++ IV S+ L + + + ++V ++++ +
Sbjct: 246 VGSYTFLIPVVSIVCSILFLNEHLTVNLIVGMALIVSSILLVNVRHRR 293
>gi|298385785|ref|ZP_06995342.1| integral membrane protein domain protein [Bacteroides sp. 1_1_14]
gi|298261013|gb|EFI03880.1| integral membrane protein domain protein [Bacteroides sp. 1_1_14]
Length = 291
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 90/284 (31%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R L + G++ T
Sbjct: 10 LIAILTVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVI-------SPKRLFTN 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q SF P+++ L + E+ +
Sbjct: 63 NWQDELWLVAGGIFGGSLYFFTENTALGITQASNVSFIICTAPLLTTILSLLFYKSEKAS 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I +LL ++ + ++ + L I + + + +
Sbjct: 123 KGLIYGSLLALMGVGLIVFNGSFVLKISPIGDLLTLLAALSWAFYSLIIKKMAGRYPTIF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + L L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFLLHPLQPDTAVLLQPAVLFNLLFLAVLASLICYVLWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y PL+ +++S IL + I V +V +
Sbjct: 243 GTVRASNYIYLNPLVTMIASFLILDEKITLVALGGAACIVCGVY 286
>gi|260654360|ref|ZP_05859850.1| putative integral membrane protein DUF6 [Jonquetella anthropi E3_33
E1]
gi|260630993|gb|EEX49187.1| putative integral membrane protein DUF6 [Jonquetella anthropi E3_33
E1]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/295 (10%), Positives = 93/295 (31%), Gaps = 16/295 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
E A L + L + A ++WG+ + + + LE++ + ++ R ++
Sbjct: 6 NETALLARVKPYLPMTLASVIWGVMVMPSSWALEELDPVVLLIARTALGGLIAACYSLWR 65
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
L ++ + + + +AL Y V+PV+++ L
Sbjct: 66 HRTLRPAPGEW-----FWLIFMGLAGVTGNNLCYFWALNLTSKTNVVVIYAVSPVVTILL 120
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY----------CFA 184
+FL ERL+ +I+ LL + ++ + + + +
Sbjct: 121 AHLFLGERLSLRRIVGVLLAVGGVMTLLTGGQLGRVMDISFNAGDLWELTGVFLAALMAV 180
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ G + +L+ ++ + L + +
Sbjct: 181 AAVKVRQTPAGIALTHTMLSGLTGAVLIGSVLGFHLPAHLSLRGVLSVAYLGVFSSCLAY 240
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S P++ ++++ + + + ++ ++++ + +
Sbjct: 241 GCQQISAVTIGASATMAFASCVPVIGMLTAWLVAGEAVTLLQIGCTVLILLGLWL 295
>gi|298345405|ref|YP_003718092.1| transporter [Mobiluncus curtisii ATCC 43063]
gi|298235466|gb|ADI66598.1| transporter [Mobiluncus curtisii ATCC 43063]
Length = 364
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/347 (10%), Positives = 99/347 (28%), Gaps = 52/347 (14%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE--------------VISHRV 60
++ N + T +G + + + G+ PL++++ + + + + + R+
Sbjct: 5 TENNYVMNTKLGVITMLISATGMGLVPLFSRWATRTDMFDGTKGLNAGNSVGALMAAGRM 64
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ ++ K K ++ ++ + G ++ + L
Sbjct: 65 TMGIIFFVCIVLLTKKV-----QVWKELKVSPAIIMGGVMIGLSLGCYVTSTLLTTVANA 119
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL---------------------- 158
++ PV+ + L +F KE + +Q I + + +
Sbjct: 120 VLLIYIGPVVCIVLARIFRKEPMGAVQYICLVAVFTGMLFGNQLIGFGDKGFFVDFNLAA 179
Query: 159 -----------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
I SGI + + + I
Sbjct: 180 STPEFPLAGLGNIFGFLSGIFYGASMFFNGYRKDADTAARGVWNFIAATVASGSLALILH 239
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L + + L ++ + + + + GI+ Y
Sbjct: 240 LVGTIGHVPGWALDLHLTPFNWVGTVLLWIICGPIALGFLLVAGRNLPAADYGIIAYWEV 299
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + I + + + F +VV + + + S KN+ +
Sbjct: 300 PVALFIGLLIFGEALTINTVLGFILVVGGGMYPSISMLRQSRKNRKQ 346
>gi|124002588|ref|ZP_01687441.1| integral membrane protein, DUF6 [Microscilla marina ATCC 23134]
gi|123992417|gb|EAY31785.1| integral membrane protein, DUF6 [Microscilla marina ATCC 23134]
Length = 265
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 79/266 (29%), Gaps = 12/266 (4%)
Query: 53 LEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYAL 112
+ +++ R+L++LP + K T + AV L F + A L
Sbjct: 1 MSLVALRMLFALPFFLAIGYFSGRSKKAAKLTPGDWVAVAFLGFVSYYFAA--LLDFMGL 58
Query: 113 LTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSL 172
L FV P + V + + ++++ Q+IA + + ++ +
Sbjct: 59 QYITASLERLILFVYPTLVVIISATVYRKKVTRSQLIALGFTYVGIAVVFAGNLDMTQQK 118
Query: 173 AIAVTWSAYCFARKTIPVGSSEG----------FFIEMCVLAIPALFYVVWNGFSGGEHF 222
+ + F + + + G
Sbjct: 119 NFMLGVLLIFGCALFYAIYMIGSEKLIPKVGATRFTAYAMTFAALGVVSHYFISNSGSLL 178
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
L + + + S GIKR S I+ P+ I+ + L + +
Sbjct: 179 QFPRQVYELSIGMAIISTVIPAFLISAGIKRIGASDASIVASVGPIATIIMAYMFLNETL 238
Query: 283 DTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + +V+ +++ L
Sbjct: 239 SVTQLLGTALVLGGVLLISLKKGKRK 264
>gi|29348532|ref|NP_812035.1| hypothetical protein BT_3123 [Bacteroides thetaiotaomicron
VPI-5482]
gi|253569103|ref|ZP_04846513.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29340437|gb|AAO78229.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251841122|gb|EES69203.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 291
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 90/284 (31%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+T + T+ L ++ E+ +R L + G++ T
Sbjct: 10 LIAILTVAIWGLTFISTKVLINHGLTPQEIFFYRFLIAYLGIWVI-------SPKRLFTN 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS-VFLKERLN 144
+ ++ ++++ AL Q SF P+++ L + E+ +
Sbjct: 63 NWQDELWLVAGGIFGGSLYFFTENTALGITQASNVSFIICTAPLLTTILSLLFYKSEKAS 122
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSE 194
I +LL ++ + ++ + L I + + + +
Sbjct: 123 KGLIYGSLLALMGVGLIVFNGSFVLKISPIGDLLTLLAALSWAFYSLIIKKMAGRYPTIF 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L + + L L L + + +++ +K+
Sbjct: 183 ITRKIFFYGVLTILPAFLLHPLHPDTAVLLQPAVLFNLLFLAVLASLICYVLWNVVLKQL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
Y PL+ +++S IL + I V +V +
Sbjct: 243 GTVRASNYIYLNPLVTMIASFLILDEKITLVALGGAACIVCGVY 286
>gi|39933238|ref|NP_945514.1| DMT family permease [Rhodopseudomonas palustris CGA009]
gi|192288589|ref|YP_001989194.1| hypothetical protein Rpal_0156 [Rhodopseudomonas palustris TIE-1]
gi|39652863|emb|CAE25605.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Rhodopseudomonas palustris CGA009]
gi|192282338|gb|ACE98718.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris TIE-1]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/301 (10%), Positives = 88/301 (29%), Gaps = 9/301 (2%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVF 68
++K + + + G L + A + + + + + SV +++ R L L +
Sbjct: 4 FAKITTASDPRTARIAGILLMLLAMLAFSFADAAGKTVVAIYSVGQLLVLRALAGLLVLS 63
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
I L+ + + + Y +
Sbjct: 64 PLIWRQRKAFLQLERPGLQLARTLIAACEVAVFYLA-------TAYLPLADVITFYLASS 116
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI 188
+ ++FL E ++ + IA ++ + + ++ L +S + A +
Sbjct: 117 LFVSVGAALFLGETIDRPRGIAIVVGFVGV-LIALQPSTQTMSWPALIAILASVLFAGLL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ +M + + ++ + + D ++ G +++ +
Sbjct: 176 LLTRFLRQTPDMVLASQQFAGTLLLGLVLAPSGWITPSATDLVWFAISGAVSAVGLLCVN 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ A S V +YT + + I++ A + S
Sbjct: 236 RSLRLAPASVVVPYQYTMIIFAAAFGWLLFGDVPSRATVAGVAIIIAAGLYLGWRERSTS 295
Query: 309 G 309
Sbjct: 296 R 296
>gi|89096151|ref|ZP_01169044.1| hypothetical protein B14911_25680 [Bacillus sp. NRRL B-14911]
gi|89089005|gb|EAR68113.1| hypothetical protein B14911_25680 [Bacillus sp. NRRL B-14911]
Length = 286
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/280 (11%), Positives = 82/280 (29%), Gaps = 11/280 (3%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L V L G + + L+ +S L + R + + +
Sbjct: 7 MLLVLLTTSLMGSSFAIGKIGLDYISPLMLTGLRFTIAGVLMAVIV-------QRKPRPS 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + A G +L T +S F P+I V LG++ +
Sbjct: 60 ALPDWLKVFSIGLFQTAGVMGCIFLSLRTITAGESSILTFSNPLIVVVLGTIIFGLKYTK 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI---AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+Q I + L +++ + A A G + +
Sbjct: 120 IQWIGVIAGFLGVILTLGFQFRLESGTLLGLGAAFSWAIATLLIKRWGGQFNTWVLTAYQ 179
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + ++ + + + + + + + F ++ Y + +
Sbjct: 180 LLFGGIVLLLMSLTMEKIELHITPLSIFIVVWLALMASIVQFAVWFYLLSKGDPGKTSAF 239
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ AP ++S +L + + ++ + + +
Sbjct: 240 LFLAPFFGVLSGWLLLGEAVHWYVYAGGALIFLGIFLVNW 279
>gi|88801142|ref|ZP_01116687.1| hypothetical protein MED297_07686 [Reinekea sp. MED297]
gi|88776123|gb|EAR07353.1| hypothetical protein MED297_07686 [Reinekea sp. MED297]
Length = 290
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/287 (8%), Positives = 74/287 (25%), Gaps = 6/287 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G ++ G L + L + V R V +++ F L
Sbjct: 8 HRQGITLAGIGVLVLGFDALLVR-LAGTTPANVAFWR----GLLVCVSLLTFMTVTGRLA 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + + ++ F+ ++ + T + + L+E+
Sbjct: 63 ELRRYRAHGLAALAVTVLYGINSALFVVSVSHTKVANTVVILSSSAFFAALFSWFLLREK 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L +A ++ + + ++ L + +
Sbjct: 123 LPLRTWVAIVVALTGV-LVVFAGSFGLADWRGDLVALILAMLMGLTLTLLRRLPELPKIP 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + L + + + + V +
Sbjct: 182 VVALSGLITALLAVPFAQPLSLDMASYGWLAVMGLVQMPVASVLLMMATRYLPSPEVSLF 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+L V +L++ I ++ I ++ A+ V+ +
Sbjct: 242 LLIETILGPVWVWLVLQESIPSMTLIGGSAILAAITVHSWLALKRER 288
>gi|84503485|ref|ZP_01001540.1| Putative transporter, DMT superfamily protein [Oceanicola batsensis
HTCC2597]
gi|84388163|gb|EAQ01116.1| Putative transporter, DMT superfamily protein [Oceanicola batsensis
HTCC2597]
Length = 290
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/287 (9%), Positives = 68/287 (23%), Gaps = 2/287 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ ++W + + L ++ R L S SL +
Sbjct: 3 LRAIGLGLAFALMWSSAFTSARMIVADAPPLTALALRFLISGLLGIAVARALGQSWSLTR 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
++ G+ + + +S FV V LG
Sbjct: 63 VQWRSTIVFGLCQNALYLGLFFIAMQRIEASLAAIIASSMPLFVGLAGWVALGDRLRPLA 122
Query: 143 LNHLQI-IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L + + + +I+ + L+ I I
Sbjct: 123 IAGLVLGMGGVALIMGSRLTGGADAGGLVLCIIGTLALTVATLSVRGASSGGNVLMIVGL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + F+ + + + R
Sbjct: 183 QMLVGSAALSLAAVTFETWEVTWSARMVLAFIYTTLIPGLAATLTWFVLVNRIGAVRAAT 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ P ++ + +L + I + + GI+ ++ L
Sbjct: 243 FHFLNPFFGVIIAAIVLGEAIGPLDIVGAGIIAAGILAVQLSKQTAR 289
>gi|330898393|gb|EGH29812.1| RarD protein [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 294
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 109/295 (36%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A L+G+ YT + + E+ R+L ++P ++ + +
Sbjct: 3 KGVVLSVLASTLFGVMYFYTSLMAPLDGEEIFGWRMLLTVPCATLFMLVSGDWRRVREVA 62
Query: 85 LKNPKAVGMLVF---SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ + ++ S+ +L F++A L + S YF+ P+ + G V E
Sbjct: 63 VRLRQQPLLIFALLLSSVLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMILTGRVVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L++LQ +AA+ ++ + G + F + G +
Sbjct: 123 HLSYLQKVAAVFAMIGVAHELWRLGSFSWETLLVAGGYPLYFVLRRTLKTDHLG---GLW 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L +W G L + G++++ + + S G+
Sbjct: 180 FDMLLMLPIGLWFIAHGHPQAIQQTPLLYLLIPLLGVISASALVSYILASRLLPFSLFGL 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y P+L++ ++ + + I + + + +A+VV ++ + + + +
Sbjct: 240 LSYVEPILLVGVALLLG-ESIGRDEWLTYLPIWMAVVVLMIEGAKHMRAQRRRDA 293
>gi|253997940|ref|YP_003050003.1| hypothetical protein Msip34_0227 [Methylovorus sp. SIP3-4]
gi|313200006|ref|YP_004038664.1| hypothetical protein MPQ_0239 [Methylovorus sp. MP688]
gi|253984619|gb|ACT49476.1| protein of unknown function DUF6 transmembrane [Methylovorus sp.
SIP3-4]
gi|312439322|gb|ADQ83428.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 309
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 94/299 (31%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
M G V A + + + ++ V +I+ R+ +S+P + +
Sbjct: 10 SSPMAGIAMVLLASVAVSSKAIIVKLAYVYPVDPATLIALRMAFSIPFFAALAWWSARQD 69
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
SL +L+ A +L A L L F+ P + + ++
Sbjct: 70 SLATLSLRQWMA--VLGLGAIGGYGPMWLDFAGLAYVSAGLERIILFLYPTMVLMFSALL 127
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-------------SGIPLLSLAIAVTWSAYCFAR 185
++ + ++ A + + ++ H G L+ + + + +
Sbjct: 128 FRQAIGRRELFALITGYAGVGLVVGHDIEFVHGTADATLMGAALVFASAVLYAAYLVLSG 187
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
K IP + F ++A L L L+ +
Sbjct: 188 KLIPQVGASRFTAYTMLVATFTSGMHYAGSQHVVSWSQLPGEVYLLSLLMAVVATVLPAV 247
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + GI+R + ++ P+ I + L + I ++ +V+ ++ L
Sbjct: 248 LLNIGIQRLGSNRASLISSIGPVSTIFLAWVFLGEHITWLQLGGTALVMAGVLAVSLGR 306
>gi|239939807|ref|ZP_04691744.1| hypothetical protein SrosN15_02320 [Streptomyces roseosporus NRRL
15998]
gi|239986293|ref|ZP_04706957.1| hypothetical protein SrosN1_03197 [Streptomyces roseosporus NRRL
11379]
Length = 345
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/310 (10%), Positives = 79/310 (25%), Gaps = 26/310 (8%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAI 71
+ + G + +G + + + L + L V+ RV + +
Sbjct: 1 MHASSRFQGRSAGLGLALLSAFAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAAVIMLPVA 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI- 130
+ + L + A A + L + + +
Sbjct: 61 WHHRNLVRERPALLAGFGLFAVAGVQAFYFASISRIPVGVALLVEYLAPALVLGWVRFVQ 120
Query: 131 ---------------------SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL 169
V + + + L L + A + +++ H G
Sbjct: 121 RRPVTRAAAVGVVLAVGGLACVVEVWAGLGFDLLGLLLALGAACCQVGYFVLSDHGGQDG 180
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
S +A I G G + V + + + G +G +
Sbjct: 181 RSGDGEGEQAAPPHPVGVIAYGLIVGAAVLTVVSRPWGMDWALLGGSAGMNGNEVP--AW 238
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
L L + ++ G++ ++ + +L + + + I
Sbjct: 239 LLLGWIVLLATVLAYVTGVVSVRMLSPQVAGVVACLEAVIATGLAWVLLGEHLSAPQLIG 298
Query: 290 FGIVVIAMVV 299
+V+ +
Sbjct: 299 GFVVLAGAFI 308
>gi|239623076|ref|ZP_04666107.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522443|gb|EEQ62309.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 297
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 91/298 (30%), Gaps = 13/298 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
++G + V A L GI P + ++ + + ++ L L
Sbjct: 2 LIGIIAVAGAATLLGIMPSMQKTLLVDGLPMNSLMFFTNLTISLVCLLMARIKGRSLKAS 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ L +G T L ++ + L F+ P + + +E
Sbjct: 62 RIQLIQALIMGASGMMFTALLLNTSY-----LYLPVGTAIMLNFLYPTVVCIIMGTVFRE 116
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE-- 199
+ LQ+ A ++ I + +T G + + S+ + I +
Sbjct: 117 GFSKLQVAAIIVSITGMAFLTGAGGKMPVIGIVTAIASSLTYGGYLIANEKGPANDLPIE 176
Query: 200 ----MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
L +F V+ + G L + G GL + + YGI R
Sbjct: 177 AKLFYVSLPGTVIFAVLSAATGTLQAPAGGLSGWALLIGGSGLFTVSGYFLMMYGISRLG 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
ST + P++ +V P+ +VV +++ + S
Sbjct: 237 ASTAAFVSMLEPIVSVVFGTIWFDDPVTLGIVAGGCLVVTSILFITFDGFLKSRAQAA 294
>gi|302870254|ref|YP_003838891.1| hypothetical protein Micau_5811 [Micromonospora aurantiaca ATCC
27029]
gi|302573113|gb|ADL49315.1| protein of unknown function DUF6 transmembrane [Micromonospora
aurantiaca ATCC 27029]
Length = 320
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/306 (9%), Positives = 87/306 (28%), Gaps = 23/306 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGV-FFAIVYFS 75
+ +G + I + + + + L + S + V+ RV + + A++
Sbjct: 1 MRERSSVGLGLALLSAITFATSGTFARPLITGEWSAVAVVIARVGIAALVLAVPAVLALR 60
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G ++L+ + +A F A+ + ++ V+ V
Sbjct: 61 GRWTVLRRNAGSVVLF-----GLLGVATAQACFFNAVRYLPVGVALLLEYLGIVLVVGWM 115
Query: 136 SVFLKERLNHLQIIA--ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+ +R L + L L L++ +G + + A + G
Sbjct: 116 WLVHGQRPRLLTVAGSVTALCGLGLVLDLTGAGRLDPVGVLWGLGAGVGLAGYFVIAGRI 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS------------ 241
+ + + + V GG G ++
Sbjct: 176 DAGLPSVVMASGGMAVGAVALLLLGGIGALPLAAGTADVTFGGHRVSWLVPIAGLSLIAA 235
Query: 242 -FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ G + + T + ++ + +L + + ++ +++ + +
Sbjct: 236 VVAYLAGVAGTRLLGARLSSFVGLTEVMFAVLIAWLVLDELPNLIQLAGGALILGGVALV 295
Query: 301 LLPTVI 306
+
Sbjct: 296 RADELR 301
>gi|229131861|ref|ZP_04260730.1| hypothetical protein bcere0014_8080 [Bacillus cereus BDRD-ST196]
gi|228651608|gb|EEL07574.1| hypothetical protein bcere0014_8080 [Bacillus cereus BDRD-ST196]
Length = 295
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/275 (9%), Positives = 87/275 (31%), Gaps = 5/275 (1%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ WG + L T+ LE + +I+ R + + + +++++ + T+K
Sbjct: 11 LLLVTFFWGASILLTKIGLEGIEEYNLIALRFIIA--FLLSSLIFYKHLFKVDFKTVKYA 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ ++F I A + + + +S ++++ I
Sbjct: 69 FILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVGII 126
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ + I L L G + ++ + A + + L L
Sbjct: 127 LTIIGIGLLTLTNEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVIQLCFVGL 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F ++++ + L + F + + + G++ P+
Sbjct: 187 FSLIFSFIIETPKLPSTTNSWLIILSLSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLEPV 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + + + ++++++++ +
Sbjct: 247 FSAGFAFVFTGETLTGKGYLGATLILVSVLIAEVD 281
>gi|254460848|ref|ZP_05074264.1| possible transporter, RhaT family, DMT superfamily [Rhodobacterales
bacterium HTCC2083]
gi|206677437|gb|EDZ41924.1| possible transporter, RhaT family, DMT superfamily
[Rhodobacteraceae bacterium HTCC2083]
Length = 290
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 88/288 (30%), Gaps = 7/288 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ L + + + + + + + ++ + +F + + S
Sbjct: 1 MENTRAVLLMVLSMATFAMGDAFVKLSSGAMSVSLVLIFMALPGLIIFATLAHRSAQSPF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P +V A+ + AL L P+ ++ LK
Sbjct: 61 AYEFFAKPVVWRNIVE-----AITAICMVSALALAPLSLVISIIQAVPLFVTLGAALVLK 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--FI 198
E++ + A +L+M + A+ +A + + + + +
Sbjct: 116 EKVGPRRWFAVTAGFFGVLLMLRPDTSGISYGALLALVAAIGLSTRDLLTRAMPKTVGTL 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+M AL L + ++ L+N+ + + ++ +S
Sbjct: 176 QMATWGTAALIPAGLFLLPITGPHTLPTLSGFGLVLCASLVNAIGYYSITAAMRMGDVSF 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
V YT + ++ + K+ D + + IV+ + + +
Sbjct: 236 VTPFRYTRLVFALIIAALFFKEMPDALTLLGAFIVISSGLFVMWRERK 283
>gi|163737671|ref|ZP_02145088.1| hypothetical protein RGBS107_19108 [Phaeobacter gallaeciensis
BS107]
gi|161389197|gb|EDQ13549.1| hypothetical protein RGBS107_19108 [Phaeobacter gallaeciensis
BS107]
Length = 320
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 85/285 (29%), Gaps = 4/285 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G L + I + + L + + +++ R + + I +
Sbjct: 8 LGILLMLGFCITAPMGDAVAKLLGAHIPLGQLLFVRFAAQVLLLAPLIWATGRIWRMQGR 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFI---YALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +L + ++ A+ V+ +G + L
Sbjct: 68 VLRLTFVRTLLHIAGIGAMFTGLKYLPLADAVAIAFVMPFIMLLLGKYVLGEEVGMIRLL 127
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ ++ + + ++++ A+ K + M
Sbjct: 128 ACIVGFGGTLLVIQPSFVTVGWHALWPLMVAVVFALFMLVTRQIAKDTDPVGLQAVSGTM 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + + S N L GLL + + ++ ++ A +T+
Sbjct: 188 ACVLLAPVLLLGQITDSPVLTLITPNAEQWGLLAAIGLLGTAAHLLMTWSLRYAPAATLA 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
M+Y + + +++ + + + I I + A + +L
Sbjct: 248 SMQYLEIPVAALIGLWVFDELPNGLAAIGILITIAAGLFVILRER 292
>gi|110678047|ref|YP_681054.1| hypothetical protein RD1_0671 [Roseobacter denitrificans OCh 114]
gi|109454163|gb|ABG30368.1| conserved hypothetical membrane protein [Roseobacter denitrificans
OCh 114]
Length = 294
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/286 (17%), Positives = 101/286 (35%), Gaps = 8/286 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G L + A+ + + + ++L +++ R L I L +
Sbjct: 14 LGILMMLVAWYFFAMVDVSAKWLALAGYPAFQLVFMRYAGHLVISVGMIAKDGMALDRFR 73
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ +++ A +L YAL + S F +P+I FL LKE+
Sbjct: 74 TDH-----IWLVLSRALLLISATLGNFYALSYLPLTIISAIMFSSPIIVCFLSMTILKEQ 128
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-FIEMC 201
+ + A LL +LI+ G I ++A A ++ G E
Sbjct: 129 IGPWRWGAILLGFAGVLIVIRPFGETFHPAMILPLYNATALALYSLMTRRLAGIVATETQ 188
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + AL ++ F+ ++ DT L+G G++ + + + A +T+
Sbjct: 189 QLYLGALGTMLTLPFALWFWIPPQSLLDTALLVGLGVMGWGGHQLLTNAHRFAPANTLMP 248
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y+ + + S I D + ++V + +V
Sbjct: 249 YTYSFMIYIAAFSWLIFGDVPDFWVVVGALVIVASGLVIWKREQRK 294
>gi|91786904|ref|YP_547856.1| hypothetical protein Bpro_1004 [Polaromonas sp. JS666]
gi|91696129|gb|ABE42958.1| putative transmembrane protein [Polaromonas sp. JS666]
Length = 301
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 80/289 (27%), Gaps = 8/289 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ G A + + T+F+ V VL + R + A++ G L
Sbjct: 11 ALTGIALQVAAMACFALLDTTTKFISASVPVLMALWFRYAFQAVATTVAVLPVRGRSLLR 70
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ +L ++L + ++P++ L S+ L E
Sbjct: 71 TAHPR------FQCLRGVLLLTSSMLAFFSLKYMPVGEFTAIVMISPLVITLLASLTLGE 124
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF-IEM 200
R++ L+ + L LI+ + A I
Sbjct: 125 RVSALRWTLVIGGFLGTLIIIRPGDDTFDWTMLLPLALVATHAWFQILTSRLARTEDPVT 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ ++ + +L + L+ G++ + + RA ST+
Sbjct: 185 MHFYTGWVGTLIASLALPFAWTWLDSWTLWGGLVLMGVMGTVGHFMMILAYGRAPASTLT 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
YT ++ D + ++ +V +
Sbjct: 245 PFLYTQIGFAMIGGWLAFSHVPDRWSILGIALIATCGAAGAWLSVRETR 293
>gi|42780424|ref|NP_977671.1| hypothetical protein BCE_1350 [Bacillus cereus ATCC 10987]
gi|42736343|gb|AAS40279.1| membrane protein, putative [Bacillus cereus ATCC 10987]
Length = 309
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 95/288 (32%), Gaps = 12/288 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + I ++ + + + +R+ + + + S + K
Sbjct: 17 LAISIIAISFAAVFVK-MSSAPSSILSMYRLWIIVLLMLPIVWKKREEFSKI-----QIK 70
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
G L+ S LA+H+ + +L ++ + P++S+ G KER + I
Sbjct: 71 DWGFLIGSGFFLALHFLLWFESLKHTTVASSTIILALQPIVSLVGGFFLFKERTTYSAIA 130
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSA------YCFARKTIPVGSSEGFFIEMCVL 203
+ IL ++ + S + +I +
Sbjct: 131 TMGIAILGVVCIGWGDLGLSEQAIYGDILSFLSVIAVVGYLFIGQTTVKKVSHWIYSFTV 190
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A ++ F D + ++ + I ++ + +T+ +
Sbjct: 191 FAFAGIFMGIYNIVLQVPFTGYTKWDWTVFLLLAVVPTVSHVINNWLLNYVNATTISMSI 250
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ + + F+L + ++ ++ I +V+ + V+LL + KN
Sbjct: 251 LGEPVGASILAFFLLGERLNAMQMIGSILVLFGVSVFLLQQQKRTAKN 298
>gi|315613363|ref|ZP_07888272.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis ATCC 49296]
gi|315314598|gb|EFU62641.1| DMT superfamily drug/metabolite transporter [Streptococcus
sanguinis ATCC 49296]
Length = 300
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/296 (16%), Positives = 98/296 (33%), Gaps = 23/296 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
L + G + L+ + L S L ++HR + +
Sbjct: 2 NEKTKAYLAALSFSAIIGFSFLFIKIALSYTSPLTNLAHRYTIAALVLVVL-----HQTK 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+K +L + +L S + + F +AL + P+ ++ L SVFL
Sbjct: 57 LIKVSLSRKGILSILPMSLFYPLLFFIFQSFALQYISSSEAGILQALVPIFTLLLASVFL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
KE+ + LQ +L + ++ + G + ++ + + + +
Sbjct: 117 KEKTSLLQKFFLILSVSGVVFIFFSKGANFSTETASLGFLLMLGSVLANAINNILSKAKG 176
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGN-----------------IPDTLFLIGYGLLNSF 242
A+ V++ GF L + L L +
Sbjct: 177 GRYRAMDMTAVVIFVGFFIFNALSLTSHYLEGNILAYFVPLGKLPYLLSILYLGILASIV 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ Y I R STV + +L I++ IL +PI + I +++ ++
Sbjct: 237 TGSLSIYAIVRLGASTVSVFGNLGTVLTILAGALILHEPIYSYHVIGAALIIAGIL 292
Score = 36.4 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 35/131 (26%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
++ + S + A +V + L L
Sbjct: 12 LSFSAIIGFSFLFIKIALSYTSPLTNLAHRYTIAALVLVVLHQTKLIKVSLSRKGILSIL 71
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
F S+ ++ S GI++ P+ ++ + LK+ ++ +
Sbjct: 72 PMSLFYPLLFFIFQSFALQYISSSEAGILQALVPIFTLLLASVFLKEKTSLLQKFFLILS 131
Query: 294 VIAMVVYLLPT 304
V +V
Sbjct: 132 VSGVVFIFFSK 142
>gi|312863676|ref|ZP_07723914.1| putative membrane protein [Streptococcus vestibularis F0396]
gi|311101212|gb|EFQ59417.1| putative membrane protein [Streptococcus vestibularis F0396]
Length = 296
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 102/297 (34%), Gaps = 21/297 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++G L IL+G++ ++T+ + Q S L +IS R + + V ++
Sbjct: 1 MRHKIILGCLAAAACEILFGLSFIFTKSITAQASGLALISWRFVTAFFFVNLYLLARRR- 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + +++ + + PV+++ + S+
Sbjct: 60 ----RVVINGRNLRPLTRIAILNPIIYFICETIGIRMTTASESGAFLACIPVVALIMSSL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT------WSAYCFARKTIPVG 191
LKE + Q++ ++ ++I +G + S + G
Sbjct: 116 ILKEWPSRWQVLGVTTTLIGIIIAVFAAGASTNFSLVGYFILGLAIVSYALYCVDVEKAG 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGG---------EHFFLGNIPDTLFLIGYGLLNSF 242
F I +LA L + ++ + + L +
Sbjct: 176 QFTSFEITYFMLASGCLTFGLFALSHSFLAGNLKELLTLPWSNSKFAITILYQGLGCSVI 235
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ I ++ + ++ I+++V L +P ++ + +VV+ + +
Sbjct: 236 GYILSNFAIANIGVNRTASFIGISTIISILAAVVFLGEPFSQLQILAGILVVLGVYM 292
Score = 37.2 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%)
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A F+V + + L F + GI+ S G
Sbjct: 41 WRFVTAFFFVNLYLLARRRRVVINGRNLRPLTRIAILNPIIYFICETIGIRMTTASESGA 100
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P++ ++ S ILK+ + + +I +++ +
Sbjct: 101 FLACIPVVALIMSSLILKEWPSRWQVLGVTTTLIGIIIAVFAA 143
>gi|218707571|ref|YP_002415090.1| putative permease [Escherichia coli UMN026]
gi|293407565|ref|ZP_06651484.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|293413386|ref|ZP_06656047.1| conserved hypothetical protein [Escherichia coli B354]
gi|298383313|ref|ZP_06992906.1| inner membrane transporter yiJE [Escherichia coli FVEC1302]
gi|300899926|ref|ZP_07118133.1| integral membrane protein DUF6 [Escherichia coli MS 198-1]
gi|301023713|ref|ZP_07187458.1| integral membrane protein DUF6 [Escherichia coli MS 69-1]
gi|331665600|ref|ZP_08366498.1| hypothetical transport protein YijE [Escherichia coli TA143]
gi|218434668|emb|CAR15601.1| putative permease [Escherichia coli UMN026]
gi|291425482|gb|EFE98521.1| conserved hypothetical protein [Escherichia coli FVEC1412]
gi|291468134|gb|EFF10632.1| conserved hypothetical protein [Escherichia coli B354]
gi|298276347|gb|EFI17867.1| inner membrane transporter yiJE [Escherichia coli FVEC1302]
gi|300356528|gb|EFJ72398.1| integral membrane protein DUF6 [Escherichia coli MS 198-1]
gi|300396914|gb|EFJ80452.1| integral membrane protein DUF6 [Escherichia coli MS 69-1]
gi|331057285|gb|EGI29275.1| hypothetical transport protein YijE [Escherichia coli TA143]
Length = 301
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 86/278 (30%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSALLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL L + + ++ + +K S +
Sbjct: 192 LYAALVMSAVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|167622625|ref|YP_001672919.1| hypothetical protein Shal_0685 [Shewanella halifaxensis HAW-EB4]
gi|167352647|gb|ABZ75260.1| protein of unknown function DUF6 transmembrane [Shewanella
halifaxensis HAW-EB4]
Length = 313
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/310 (12%), Positives = 99/310 (31%), Gaps = 22/310 (7%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G F A L G+ + + ++ + R+L+ + F + +
Sbjct: 5 KNAKHVGFASAFGAATLMGLVGFFARNIDAQG-DVIAFSRMLFGMILFFIILKSLNRI-- 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
LK K +VFS + V ++ + F ++ P+IS L +FL
Sbjct: 62 ---GDLKKYKLSPSMVFSGIFMGVCLSAYVASTQLTSIANAVFFIYIGPIISTVLAIIFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT------------ 187
KE L + I + + + ++ + ++ +++S F
Sbjct: 119 KEPLKPITIFSIAFVFIGMMFIVGLVHFTPEGISFGMSFSKDTFIGDMLGLASGVGYGLF 178
Query: 188 ----IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
G + F+ + + ++ +
Sbjct: 179 LFLGRYRTEVPGDVRSFWNFLFALIGICSLFLFTNPSTSQMTSSDWVWWIGIGLVCGFGA 238
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + K + Y ++ + + + +P+ V+ + +++I V ++
Sbjct: 239 LSLCTIATKNLLAVEFACISYWECVVASIIGILVFTEPLSGVQMVGGLLIIIGGVSEMVV 298
Query: 304 TVINSGKNKT 313
+++ + K K
Sbjct: 299 SLLQNTKKKR 308
>gi|126657969|ref|ZP_01729121.1| hypothetical protein CY0110_05122 [Cyanothece sp. CCY0110]
gi|126620607|gb|EAZ91324.1| hypothetical protein CY0110_05122 [Cyanothece sp. CCY0110]
Length = 326
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/278 (10%), Positives = 84/278 (30%), Gaps = 11/278 (3%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
T ++ + + S + + + + A + + N KA + +
Sbjct: 42 SSTAIFIRLALEASGKLGLEFSLFLAASRLIIASIVLFPAWKTVVKNKANVKAYYYAIGA 101
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
LA H+ +I +L ++ P+ L + E++ + I+ + +L
Sbjct: 102 GFSLAFHFVCWITSLSFTSIAASTTLVTTNPIWVALLSWFWFGEKIKKITILGIFIALLG 161
Query: 158 LLIMTLHSGIPLLSL-----------AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+++ L S A+ S Y K + V
Sbjct: 162 GILIALGGNDLNNSYNQPMLGNVLALMGALFVSFYLIFGKISQQEGLNISSYSVIVYTTA 221
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
A+ G + N L+ ++ ++ + + +
Sbjct: 222 AILLFPLPFVFGSGYSNYPNPVYLYVLLMAIFSQLIGHTSINWSVRYVSPTLITLAILFE 281
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P+ + ++ + I I+++ +++ ++ +
Sbjct: 282 PIGSSFLGFLLFQEIPSILVLIGAFIILVGVIIAVVSS 319
>gi|157371633|ref|YP_001479622.1| hypothetical protein Spro_3396 [Serratia proteamaculans 568]
gi|157323397|gb|ABV42494.1| protein of unknown function DUF6 transmembrane [Serratia
proteamaculans 568]
Length = 307
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 97/279 (34%), Gaps = 16/279 (5%)
Query: 34 YILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG+ + + E +S + I+ R + V+ Y K P +
Sbjct: 19 CAIWGLQQVAIKAAEPDISAVLQIAIRSGIAALAVYLLARYRRE-----KFVFDRPTLLA 73
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + T + F Y ++ L V ERL+ +Q +
Sbjct: 74 GLCVGFFFALEFFFVSEGLRYTSASHMAVFLYTAPLFSAIGLHFVIRHERLSLIQWVGIA 133
Query: 153 LIILSLLIMTLHSGIP----------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +++ + L ++W +T + + +
Sbjct: 134 IAFGGVVLAISGMSDSSGAENSLRGDIYGLLAGMSWGGSTIVIRTTGLANCSSKQTLLFQ 193
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L+ + + + HF L + T + +++ + I+ ++ + S++GI+
Sbjct: 194 LSGACILLSLLAITTQSVHFNLTALAWTSLIFQTLVVSFISYLIWFSLLRHYQASSLGIL 253
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P+ I++ V IL +P+ + ++V+ ++V
Sbjct: 254 TFMTPVFGILAGVVILGEPLQIEFVLGSVLIVLGLIVVS 292
>gi|229085307|ref|ZP_04217549.1| Transporter, Drug/metabolite exporter [Bacillus cereus Rock3-44]
gi|228698026|gb|EEL50769.1| Transporter, Drug/metabolite exporter [Bacillus cereus Rock3-44]
Length = 296
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 93/287 (32%), Gaps = 10/287 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L +F + ++ + L +R+ ++ + ++ + L K
Sbjct: 13 YLVLFFGVFALSTSAIFVK-LADAPAAITAFYRLFFATIMLLPFLLINKKDRNELYSLSK 71
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G+L S LA H+ + +L ++ + P+ S+ G KER +
Sbjct: 72 KQWGFGLL--SGIFLAAHYVLWFESLHYTSVASSTVIVTLQPLFSMVGGYFLFKERFSKG 129
Query: 147 QIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ L+ I +++ + + IA F
Sbjct: 130 AVLGCLIAIAGSIVIGWKDFQISGQALFGDILAFIAAGIITAYFFVGQHVRKKLSLVPYS 189
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ ALF ++ F+ + IF++ +K + +
Sbjct: 190 VISYGSSALFLGMFAFSQKTSFVNYSAQTWWSFIGLALIATILGQTIFNWLLKWLSTTVI 249
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + V + FIL++ I + I +++I + ++LL
Sbjct: 250 SMSILGETIGTCVLAYFILEEVISLQQGIGIVLILIGLTLFLLQPKK 296
>gi|83649289|ref|YP_437724.1| DMT family permease [Hahella chejuensis KCTC 2396]
gi|83637332|gb|ABC33299.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Hahella chejuensis KCTC 2396]
Length = 288
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 101/295 (34%), Gaps = 16/295 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L A +WG T + TQ +L+ + L V R L + + + +L+
Sbjct: 4 LLGVLAPAVWGTTYVVTQAWLQDLGPLWVSVLRALPAGLLLMCLDL----------KSLR 53
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++ A ++V + F A L + +TP+ ++ + ++ N +
Sbjct: 54 HMDMRRSVILGALNISVFFFFLFTAALRLPSGVAGTLMALTPLTTLLFLWWWQRQAPNPI 113
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC-----FARKTIPVGSSEGFFIEMC 201
Q++ A ++ + ++ + + +A ++ A
Sbjct: 114 QLLCAFGGLIGVGVVIFQPSSQIDPVGVAASFGAVVSLTVGTFLAKKWSPPKGILAFTGL 173
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + + G L L + + + + ++R +S +
Sbjct: 174 QLFLGGMLLLPLAFLLEGPMPALNREAMLGLLWVDLVNTALGYLAWFIAMRRLPVSALSF 233
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ +P+ ++S +L++ + +V++++ + K + S
Sbjct: 234 LALLSPVSAVISGRLVLEEWFTPAQYAGIAMVLLSVTLAQFARAKTQPKMAQQAS 288
>gi|52141084|ref|YP_085747.1| permeases of the drug/metabolite transporter (DMT) [Bacillus cereus
E33L]
gi|51974553|gb|AAU16103.1| permeases of the drug/metabolite transporter (DMT) [Bacillus cereus
E33L]
Length = 311
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 89/299 (29%), Gaps = 19/299 (6%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + WG + L ++ + + R + + + S L
Sbjct: 8 YVIMLFVPLFWGGSFATAEHVLTEIPPITAATIRFGLAGCILIGIVF----MKSEWNTGL 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
G+L S T + + FF L S PV +F KE +
Sbjct: 64 LLKNWKGLLFVSLTGIFGYNVFFFMGLNYTSTLNGSLIIATMPVFVTLGAILFFKESWSI 123
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
I+ +L ++ ++++ G L A+ +K + S
Sbjct: 124 KVGISLILSLIGVIVVITSGSLDTLMSLSFNKGDLLFIAALICGVLYSLTGKKVMRGVSP 183
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ M VL L + G+ L + +F+ G++
Sbjct: 184 LLTTMSMTVLGTVFLAGLSLYEDGWGKVGAFSLQGWIEMLYMVICGTLIGYIVFNKGVEE 243
Query: 254 AKLSTVGIMEYTA--PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S + P++ SV + + + IV+I + + + + + K
Sbjct: 244 LGASKASMYLNLTLTPIVATSISVVLYGAAVTWQQIAGMIIVLIGVYIATVKSNKDIKK 302
>gi|27367935|ref|NP_763462.1| hypothetical protein VV2_1590 [Vibrio vulnificus CMCP6]
gi|27359508|gb|AAO08452.1| Putative membrane protein [Vibrio vulnificus CMCP6]
Length = 302
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 84/291 (28%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++WG + + + + +R ++ + + + +
Sbjct: 3 YLLPLFTVLIWGGNSIVNKLAASAIEPSAMSFYRWFVAMAILTPFCL----PHVIRQWQQ 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT S + P+ISVFL L +R++
Sbjct: 59 IKPYLSKLAFLATLGMVLNQSLGYYAGLTTSASNMSLITSLVPLISVFLSVPLLGKRVSA 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L +I + + L M + + + Y +
Sbjct: 119 LSLIGGAISLFGLAYMLGQGDVAFFIEQPVTQGDGLMVLAAIVYAAYCVLLKRWKMPFSN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + E L + ++ I
Sbjct: 179 WTLIYMQGLFAVAMLTPLWLTSEQLLPSAEALPLIFYAGVAASILAPWMWVKAIDSIGAE 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ + + +L + + + +V+ +++ L +
Sbjct: 239 SSAMFMNLLPVVAVALATSMLGEQVHLYHFVGGLLVIFGVILSQLKPRKKA 289
>gi|163848639|ref|YP_001636683.1| hypothetical protein Caur_3095 [Chloroflexus aurantiacus J-10-fl]
gi|222526575|ref|YP_002571046.1| hypothetical protein Chy400_3343 [Chloroflexus sp. Y-400-fl]
gi|163669928|gb|ABY36294.1| protein of unknown function DUF6 transmembrane [Chloroflexus
aurantiacus J-10-fl]
gi|222450454|gb|ACM54720.1| protein of unknown function DUF6 transmembrane [Chloroflexus sp.
Y-400-fl]
Length = 304
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 85/283 (30%), Gaps = 15/283 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WG + L ++ L + R + + + + G +L
Sbjct: 22 LTMLLVVLIWGANFSIVKAALTEIPPLVFATLRFTSASVLLVGFMFWREGKRALPD---- 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++ F Y+L S TP + ++ ER+ +
Sbjct: 78 RRTFWKLTWIGVVGNTIYQALFTYSLTMTTAANGSLIIATTPALVALAAALLGIERIRRV 137
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG----------SSEGF 196
+ L I + ++ G+ L + A + S
Sbjct: 138 MAVGIALAISGVALVVAERGLSLGGQGLLGDLLMLGAAFCWMMYTLGVRTLGQGLSPLAI 197
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V +P + + +S + L + +++ ++ A
Sbjct: 198 TTWTMVTGVPGMILISLPDWSTVVWDQVSLQAWLALAYSTLLALVLAYVLWNNSVRVAGS 257
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I PL+ + + ++ + V+ I ++V +++
Sbjct: 258 ARTAIYGCAIPLVATLIAWPLIGEQPTWVQGIGGLLIVSGVLL 300
>gi|318080846|ref|ZP_07988178.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length = 330
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/304 (6%), Positives = 66/304 (21%), Gaps = 41/304 (13%)
Query: 29 FVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + +G + + + L + L V+ RV + +
Sbjct: 2 LALVSALAFGGSGVAAKPLIEAGLDPLHVVWLRVAGAALVLLPVAWRHRALPRARPAL-- 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L + +A + A+ + ++ P + + + ++
Sbjct: 60 ------LLGYGLFAVAGVQACYFAAISRIPVGVALLVEYLAPALVLGWVRFVQRRPVSRA 113
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI-------- 198
+L + L + + + V S G
Sbjct: 114 ATAGVVLAVGGLACVVEVWAGLRFDALGLLLALGAACCQVGYFVLSDHGTEPASPAEPAG 173
Query: 199 -----------------------EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
+ E L
Sbjct: 174 RTGPAQEPPSPLGVIAYGLLVGAVVLTFVARPWGMDWSVLGGRAEMDGTPVAAFLLLAWI 233
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ + ++ ++ ++ V + +L + + + +V++
Sbjct: 234 VLVATVVAYATGVVSVRGLSPQVAVVVACLEAVVATVLAWVLLGEHLSPPQLAGGCVVLV 293
Query: 296 AMVV 299
V
Sbjct: 294 GAFV 297
>gi|312132620|ref|YP_003999959.1| rhat [Bifidobacterium longum subsp. longum BBMN68]
gi|311773568|gb|ADQ03056.1| RhaT [Bifidobacterium longum subsp. longum BBMN68]
Length = 311
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 81/285 (28%), Gaps = 16/285 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + LWG + L +F +E + ++ R++ + +
Sbjct: 25 LMLLGCAALWGGSYLLAKFAMEAIPPQWLMGLRMIGACLCMLAL-------FHKHIVPYL 77
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
PK + + L T + ++F V++ F + K R +
Sbjct: 78 TPKIIVPALVVGLTYWGTMVTQTIGLQTIEPGRSAFLTAAYCVLTPFATWIISKTRPKAI 137
Query: 147 QIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++A ++ ++ + ++L +G L +
Sbjct: 138 NLVAGVICLIGVGFVSLKPGGSLSLSAGDWLTIATAVIFSFNLTCLGVYTKRFDPIAVTF 197
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+A +L L + + + G+ S
Sbjct: 198 VQFGVAGVLFIIGALFTEPMPNASWLAPSVVASVLYLFLGATMSAQIMQNIGLAHVPASQ 257
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I+ T L + S + I + F ++ A+++ ++
Sbjct: 258 ASIIMCTESLFAVTFSALFWGERIMWSSLVGFALIFAAVLMSVIR 302
>gi|282880229|ref|ZP_06288946.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1]
gi|281305889|gb|EFA97932.1| putative membrane protein [Prevotella timonensis CRIS 5C-B1]
Length = 296
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 85/288 (29%), Gaps = 6/288 (2%)
Query: 30 VFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F +WG T + T+ L +S EV + R L + + + + L
Sbjct: 8 AFLTVAIWGSTFISTKVLIQSGISPAEVYTLRFLIAYVLMLLFFHKHIFARTWKDELLMA 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL---- 143
+ V G+ ++ + I + + +
Sbjct: 68 GLGLTGGTVFFLAQNVALGYSTAMNVSLIVCSCPLFTMLLHRIWFRSEPLGKWQIIGTAF 127
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + + A +L +L ++ L I+ + + ++
Sbjct: 128 SFVGMAAVVLNGQLVLNLSPLGDSLALLACISWAVYSLLLKKANEKYPTTFITRKVFFYG 187
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ L Y + + L + + F ++++ + R
Sbjct: 188 LLTVLPYYAFEPGFPSVETLMQPKILYNLLFLGAIASMLCFWLWTWVMLRLGALQATNYV 247
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
Y P+ I+ + +IL + I + +++ + + + GK+
Sbjct: 248 YVNPVTTIIFAAWILHEEITVYFVVGTALILTGLYLSSRKQPLRFGKS 295
>gi|226308195|ref|YP_002768155.1| hypothetical protein RER_47080 [Rhodococcus erythropolis PR4]
gi|226187312|dbj|BAH35416.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 315
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/296 (8%), Positives = 83/296 (28%), Gaps = 21/296 (7%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G +F + +G++ + + L S + RV + V
Sbjct: 1 MNSRNGLIFALLSAATFGVSGPFAKSLIESGWSPGGAVFARVAGGALVMMAIAVAT---- 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +L++ ++ F A+ + ++ P+I + +
Sbjct: 57 QWPRLRQVSANTRTVLLYGVFAISGVQLCFFNAVQHLSVGVALLLEYLAPIIVIGWVWIT 116
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE---- 194
R + ++ A + ++ ++ G +S A V S
Sbjct: 117 KGARPSVQTLLGAAVAMIGAAVVIDVFGSAEISAVGVAWGLAAAACLAVYFVISERADGD 176
Query: 195 -----------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ + S ++ +
Sbjct: 177 LHPVVLAASGLTVSAVVIGALGLVGVLPLQFSASNAVVADHSVNVWLPVVVLVLVSTVIA 236
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I + ++ T L ++++ ++ + + ++ + ++ +V+
Sbjct: 237 YLTGIAAITLLGPTIGSLVALTEVLCAVLAAWILVGESVTALQAVGGAAIIAGLVL 292
>gi|169334173|ref|ZP_02861366.1| hypothetical protein ANASTE_00569 [Anaerofustis stercorihominis DSM
17244]
gi|169258890|gb|EDS72856.1| hypothetical protein ANASTE_00569 [Anaerofustis stercorihominis DSM
17244]
Length = 310
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 104/299 (34%), Gaps = 23/299 (7%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+S +P + G L+ ++GI+ +T L + L++ + R L++ +
Sbjct: 1 MSNNKKIMPYITGFLY----SFIFGISFAFTSEVLTVLHPLQLPAVRFLFAALFITLLYF 56
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ K K +++ + +++ F Y + L+ PV+
Sbjct: 57 F-----GAFKLNYKGKDLKLLILLAMFEPLLYFIFETYGVKLTTSSLSGTMIATIPVVVC 111
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWS------------- 179
L +FL+ER + LQ + +L ++ +I+ SG +
Sbjct: 112 ILAVIFLRERPSFLQWVFIVLSVIGSVIVVTGSGSSGGTSETIGILCLLGAVISGAGYNI 171
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
+ F + ++ + GF G F + + +
Sbjct: 172 MNKIVCEKFTAIEVTFFMMWFAAISFGIISIFYSKGFGGYIAAFTNVKVLLILMYLGTVS 231
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ F +++ + ++ ++ +++ VF+ K+P ++ + I+V +
Sbjct: 232 SVLAFFCYNFTLHNLPIAPAAAFANLITVISVIAGVFVRKEPFTLIQMLGAAIIVAGVF 290
>gi|17549857|ref|NP_523197.1| hypothetical protein RS02196 [Ralstonia solanacearum GMI1000]
gi|17432113|emb|CAD18789.1| putative permeases of the drug/metabolite transporter (dmt)
superfamily transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 297
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 88/297 (29%), Gaps = 13/297 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ A ++W + ++ V + +R + + + F +
Sbjct: 3 VFYPLLAVLVWAANTIVSKAAAGVLDPAAISLYRWVIAAAVLTP----FWARPLWRQRRD 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + V + L ++ YA + + P++ + + V ++ +
Sbjct: 59 VLPWLPRLSVLALLGLVMYQCLSYYAAYSTSATNIGVICALIPMLGLIINGVVFRQPVGA 118
Query: 146 LQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ + +L +L + G+ + + + +AY +
Sbjct: 119 PAVAGIAVSLLGVLYLLGRGHPASLFDGGVNRGDVLVLIGSAAYALYNILYRRWAPPFGQ 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L ++ + + L + + G+ R
Sbjct: 179 WLNLYLQALLAVVMLLPLAFTARSLAIPQQGIGMVLFAGIGASIVAMYWWMLGLARLGSE 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+M P+ + + +L + I I G++++ + + + G+++ +
Sbjct: 239 RTVVMMNLLPVFTALMASAMLGETIHGYHWIGGGLILLGVSLVQGIVTLPMGRDRLR 295
>gi|15966257|ref|NP_386610.1| hypothetical protein SMc01970 [Sinorhizobium meliloti 1021]
gi|307317385|ref|ZP_07596825.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
gi|15075527|emb|CAC47083.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306896974|gb|EFN27720.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
meliloti AK83]
Length = 281
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 84/280 (30%), Gaps = 10/280 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ G +P++ + L +V + RV +L + G +
Sbjct: 1 MAALIIGGAAIGGSPIFVR-LSEVGPMATAFWRVALALIPLVAWSRLRGGAAAEKPPQCL 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ A +L LA+ + AL + + PV G + ++ +
Sbjct: 60 SDYAQLILP--GVFLAIDLAAWHLALTMTSVANATLLANLAPVFVTLAGWALFRSAVSGI 117
Query: 147 QIIAALLIILSLLIM-------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ I ++++ +A + A I
Sbjct: 118 FLAGLATAIAGVVVLKGGPAALGGGDLAGDGIAIVAAAFYAGYILAIGRLRSRFSTNRIM 177
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ A A+ + + F + + ++ +Y + +
Sbjct: 178 IWSTASAAVCMLPMALLTEPSLFPPSAFGWAMLFGLAFVSHAGGQVAITYALAFLPPAFS 237
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P++ + + +L +P+ ++ I IV+I +++
Sbjct: 238 SLTLLLQPVVAALLAWVLLSEPVGLMQAIGGAIVLIGILI 277
>gi|325292954|ref|YP_004278818.1| transporter protein [Agrobacterium sp. H13-3]
gi|325060807|gb|ADY64498.1| probable transporter protein [Agrobacterium sp. H13-3]
Length = 311
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/308 (11%), Positives = 93/308 (30%), Gaps = 19/308 (6%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFA 70
++ + G + + + + +++ +S +V +R + L
Sbjct: 1 MTSQTGLNDVAKGMMIMAGCMFVLPVMDAIAKYMAVSGGMSPAQVTFYRFFFQLLCTLPL 60
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
++ S L + + M + A F A+ YFV P +
Sbjct: 61 LLLVS------PKALFSARRPWMNCLRGVLHASASLMFFAAVKYMPLADVFAIYFVEPFM 114
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ ++FL +R+ + A + LI+ S ++ A+ +
Sbjct: 115 LTMMSALFLGDRVGWKRWTAIAVGFGGALIVIQPSFEIFGWTSLLPVACAFLYTLYLFLN 174
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFS----------GGEHFFLGNIPDTLFLIGYGLLN 240
+ + + + + V+ + + LI G ++
Sbjct: 175 RAIGDADSPLVMQTMSGIAGTVFMAAALLVGDAYGDKDFAISLPQSGFTLTLLIVLGSIS 234
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ + + A LS + +Y + V + + + I+V + +
Sbjct: 235 GYMHLLIVRAFRLAPLSLLAPFQYFEIISATVLGYALFSDFPTPSKWLGILIIVASGLFI 294
Query: 301 LLPTVINS 308
+ + +
Sbjct: 295 IWRERVQT 302
>gi|299138464|ref|ZP_07031643.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX8]
gi|298599710|gb|EFI55869.1| protein of unknown function DUF6 transmembrane [Acidobacterium sp.
MP5ACTX8]
Length = 307
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/313 (11%), Positives = 86/313 (27%), Gaps = 24/313 (7%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + T+ L + ++WG T + L VS L R+ + +
Sbjct: 1 MPNQTKRSHTLTAHLLLIAVTLVWGATFPLVKSALLDVSPLLFNLLRMTLAFLILAAL-- 58
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + K + + L + + F L ++F + V
Sbjct: 59 ------NGRSLRGLSRKDLRFGAVAGLFLGLGYQFQTAGLARTSASKSAFITGLVVVFVP 112
Query: 133 FLGSVFLKE-----RLNHLQIIAALLIILSLLIM----------TLHSGIPLLSLAIAVT 177
LG + + I A L+++ + G+
Sbjct: 113 LLGMIPRVRAAGAVKPGLYTFIGAFAAFAGLVLLTTPPGSGAALLVGLGLGEWLTLACAV 172
Query: 178 WSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYG 237
A + + + A ++ G F L + +
Sbjct: 173 AFAAHLLTLAHAATNVSARRLGTLQIGFAAFVLLITLPLGGHPAFHLTSRAVLALAVTAI 232
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
L + F I S+ + S ++ P+ ++S+ L + + +++ +
Sbjct: 233 LATAAAFTIQSWAQQHLPASHTALIFTLEPVFAWLTSLIFLHEHLGARALCGAALILAGI 292
Query: 298 VVYLLPTVINSGK 310
+ + +
Sbjct: 293 LAAEFGPTLRQSR 305
>gi|317132460|ref|YP_004091774.1| protein of unknown function DUF6 transmembrane [Ethanoligenens
harbinense YUAN-3]
gi|315470439|gb|ADU27043.1| protein of unknown function DUF6 transmembrane [Ethanoligenens
harbinense YUAN-3]
Length = 311
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/288 (9%), Positives = 80/288 (27%), Gaps = 12/288 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F A I+WG+ + + ++ + ++S R + + + + +
Sbjct: 6 LIFALIAVIVWGVNFTVIKLGVGEIPPMLLVSLRYIAASLPLIAFVKPPKISWKYVLAYG 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV-----------ISVFL 134
I +L Q F T V +
Sbjct: 66 LTVGVGQFACLFYAIHIGMPAGVSSVVLQSQAFFTILLDAVFFKESLKASQVIGLVVSAA 125
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
G F+ + + A L ++ +A +
Sbjct: 126 GLFFVNGNIGSGKASAIPTGAFFLTLLAAVFWGVSNIIARHASKQVASRGETLNMFSLVV 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + L + L + I+S I +
Sbjct: 186 WSSLVPPIPMLAIALLLDKPSTLLHAVSHLNALSIFSILYLAFFATLIGYGIWSSMIAKY 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
V + P++ +++++ +LK+ + ++ + I+++ +++
Sbjct: 246 PAGKVAPLSLLVPVVGLITALIVLKEQLSNMQWLGGVIIIMGLLITNF 293
>gi|317049123|ref|YP_004116771.1| hypothetical protein Pat9b_2916 [Pantoea sp. At-9b]
gi|316950740|gb|ADU70215.1| protein of unknown function DUF6 transmembrane [Pantoea sp. At-9b]
Length = 299
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/294 (9%), Positives = 87/294 (29%), Gaps = 21/294 (7%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + L+ + Q + RVL+ G+ ++
Sbjct: 9 LILLAAIWGASFLFMRIAAPQFGAINTAFLRVLFGFIGLAVILLVLRSSFDFAGKLRAAL 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + ++ ++ TP++ +G F E+L +
Sbjct: 69 ILGVINSGLPFFMYCLAAKWL------PAGYSAILNATTPLMGAVIGVTFFSEKLTVRKW 122
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIA--------------VTWSAYCFARKTIPVGSSE 194
I +L ++ + ++T S +A + + + + +
Sbjct: 123 IGVILGLIGITVITTLGESHADSNVLAGVAACLVATGCYGLAGFLTRRWISQRGGLDAKT 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F + L + ++ + + L + + + ++ I
Sbjct: 183 VAFGSQIGATLFLLPFFAFSVAHEPDINWQQPTVWASVLAVGLICTALAYILYFRLIADI 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P ++ +L + + + + +V +A+ + + P +
Sbjct: 243 GPLRSLTVTFLIPPFAVLWGYLVLDETLSSGFVLGAVMVCVAVWMVVGPGKKQT 296
>gi|163858795|ref|YP_001633093.1| regulator protein [Bordetella petrii DSM 12804]
gi|163262523|emb|CAP44826.1| probable regulator protein [Bordetella petrii]
Length = 296
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 89/295 (30%), Gaps = 16/295 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+P A +WG T + T L L V R L + + + G+
Sbjct: 1 MPRSADVFATALAPAIWGSTYIVTTELLPDGYPLTVAMLRALPAGLLLLWWARSLPHGIW 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L+ L +V W + G + + + +I + L + L
Sbjct: 61 WLRSFLL----------GGLNFSVFWAMLFVSAYRLPGGVAATLGSIQTLIVIGLARLLL 110
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-----WSAYCFARKTIPVGSSE 194
+ + AA+ I + ++ L L L +A A
Sbjct: 111 GAPVRGWSVAAAMAGIGGVGLLVLTPDAALDPLGVAAGLIGALAMALGTVLSRRWQPPVR 170
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
L L + + L + +F + ++ G+ R
Sbjct: 171 ALTFASWQLTAGGLLLLPVAAWLEPPLPALSAANLGGLAYLAVIGGAFTYALWFRGLARL 230
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ V + + +P+ +V +L Q ++T + IV+ ++ V + +
Sbjct: 231 GPAAVAALGFLSPVTAVVLGWALLGQRLNTPQLAGMIIVIGSVWVVQRVQAMPAR 285
>gi|15612220|ref|NP_223873.1| hypothetical protein jhp1155 [Helicobacter pylori J99]
gi|11387376|sp|Q9ZJZ2|YC34_HELPJ RecName: Full=Uncharacterized transporter jhp_1155
gi|4155762|gb|AAD06740.1| putative [Helicobacter pylori J99]
Length = 298
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 104/302 (34%), Gaps = 14/302 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + A + +GI + + S +E + +R + + +
Sbjct: 1 MRNTILFGVSMILLANLCFGIMSAFVKITADYFSPMENVFYRSITMTLLLLLIYPFKPYR 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K A ++V +LA Y + + P+ +V L +
Sbjct: 61 LKSYKQGGFKKLAFRVVVGGLAMLAF-----FYNIEKISLATATAFSQCAPIYTVLLSPL 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIP 189
LKE+L +I+A + ++ +++++ S I + I V+ +
Sbjct: 116 LLKEKLKRSALISACIGLVGVVLISDPSVENVGLVEIIMGILSGIFVSLAYITLRDLREY 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+++ L + + + D L++ G+ + +Y
Sbjct: 176 YDKQAVILAFAFGMSLLGLAGMFIDIPFLSTGVHIPRKEDILWISLIGISGTLGQYFLTY 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
A + +EYT + ++ +++ +D ++ +++ + ++ LP ++
Sbjct: 236 AYMNAPAGIIAPIEYTRIVWGLLFGLYLGDTFLDLKSSLGVALILCSGLLIALPALLKEL 295
Query: 310 KN 311
K
Sbjct: 296 KK 297
>gi|113969269|ref|YP_733062.1| hypothetical protein Shewmr4_0925 [Shewanella sp. MR-4]
gi|113883953|gb|ABI38005.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-4]
Length = 296
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 84/285 (29%), Gaps = 4/285 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + + + + + +R +++ + ++ L
Sbjct: 3 YLFPLLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLVLTPFMLKPVWHKRKTIAPL 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A + ++ + T + S ++ ++V L L +
Sbjct: 63 LPKLATLAALGMVLNQSLAYFAAATTTATNMALINSLVPMMSLFLAVPLLKQKLTPLVFG 122
Query: 146 LQII---AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+I + ++ + L G+ L + ++ Y + E
Sbjct: 123 GTVISLLGLVFMLSHGDMANLAIGVTQGDLLLLISAFVYALYGVLLKRWQLPISTWESVY 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ ++ + + L L + + GI + I
Sbjct: 183 IQGLIAVLMLTPLLFSAPSVAISSQAAPLILYAALGASLIAPWAWINGISKLGAEQTSIF 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
P+L + + FIL + + + +V+ +++ + +
Sbjct: 243 FNLMPILAAILAAFILNETLAVYHYLGGALVIFGVMLVQVKPKLK 287
>gi|323492287|ref|ZP_08097443.1| hypothetical protein VIBR0546_03867 [Vibrio brasiliensis LMG 20546]
gi|323313451|gb|EGA66559.1| hypothetical protein VIBR0546_03867 [Vibrio brasiliensis LMG 20546]
Length = 302
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 102/281 (36%), Gaps = 10/281 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
A+ T + L + + ++ + + L+ VS + + R L S +F
Sbjct: 2 AASATYVAILLLVIGNLAASLSDVAVKLLDGDVSTFQYVFVRQLLSTLVIFPF------- 54
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + K G+ + A ++ + G + A+ + ++ P++ + L +
Sbjct: 55 WWRQKPSQKKLYNPGLNLLRAQLILIGSGCMVIAITHLTLATANAVFYAAPLLMLPLAVL 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L E++ ++ AAL + +L++ S A + + A +
Sbjct: 115 LLGEQITWQRVSAALFGFIGVLVVLRPS--EFHWAATFALGTTFTLALFNVTARKLPTEQ 172
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +L + + ++ + + ++ L + +RA S
Sbjct: 173 TIVSTLFWTSLLSLPISAVLAFIYWAPISTGQMMLILASAGLILSYNGLAVMAYRRAPAS 232
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + E + + +++ V + D + I ++V+ ++
Sbjct: 233 HISVAENSGLVFVVIIGVIYFDEVPDWLTLIGIAMIVLPLI 273
>gi|323526685|ref|YP_004228838.1| hypothetical protein BC1001_2362 [Burkholderia sp. CCGE1001]
gi|323383687|gb|ADX55778.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1001]
Length = 309
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/276 (13%), Positives = 84/276 (30%), Gaps = 3/276 (1%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y++WG T L L L + R L++ G+F L +
Sbjct: 33 YLVWGSTYLAVHVALGSFPPLLMSGLRNLFAGVGLFALAARREPVWPSLAEIRNAGLVGT 92
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
MLV ++ + + + + + VI+ G K + +
Sbjct: 93 MLVGLSSGMLAYGMRTVG--TGTAAVMVATVPLFATVIAAVAGRKIGKGEWFAVGLGLVG 150
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ ILS S L++ + A + S+ F + + +
Sbjct: 151 IAILSHGDSAPGSAGGSLAILCGALFWAGGAHLASRLKLPSDLFLSTSLQIGLGGAMSTM 210
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
SG + +P F+ + + + + I+ Y P++ +
Sbjct: 211 VAWVSGERMLDVHVLPVLAFIYLMLIGTMAAYVAYGFLIRHTSPIIASSCMYVNPVVAVA 270
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+L +P+ I ++++++ +
Sbjct: 271 LGALLLGEPVTHSTVIATVVILVSVGLSFWLDYRKK 306
>gi|52142462|ref|YP_084367.1| drug/metabolite exporter family protein [Bacillus cereus E33L]
gi|51975931|gb|AAU17481.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus E33L]
Length = 303
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMKRSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPIDMLSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 294
>gi|315655812|ref|ZP_07908710.1| permease [Mobiluncus curtisii ATCC 51333]
gi|315489876|gb|EFU79503.1| permease [Mobiluncus curtisii ATCC 51333]
Length = 364
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/347 (10%), Positives = 98/347 (28%), Gaps = 52/347 (14%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE--------------VISHRV 60
++ N + T +G + + + G+ PL++++ + + + + + R+
Sbjct: 5 TENNYVMNTKLGVITMLISATGMGLVPLFSRWATRTDMFDGTKGLNAGNSVGALMAAGRM 64
Query: 61 LWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT 120
+ ++ K K ++ ++ + G ++ + L
Sbjct: 65 TMGIIFFVCIVLLTKKV-----QVWKELKVSPAIIMGGVMIGLSLGCYVTSTLLTTVANA 119
Query: 121 SFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL---------------------- 158
++ PV+ + L +F KE + +Q I + + +
Sbjct: 120 VLLIYIGPVVCILLARIFRKEPMGVVQYICLVAVFTGMLFGNQLIGFGDKGFFVDFNLAA 179
Query: 159 -----------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
I SGI + + + +
Sbjct: 180 STPEFPLAGLGNIFGFLSGIFYGASMFFNGYRKDADTAARGVWNFIAATVASGSLALMLH 239
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
L V + ++ + + + + GI+ Y
Sbjct: 240 LIGTVGHVPGWSLDLHFTPFNWVGAVLLWIICGPIALGFLLVAGRNLPAADYGIIAYWEV 299
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + I + + + F +VV + + + S KN+ +
Sbjct: 300 PVALFIGLLIFGEALTINTVLGFILVVGGGMYPSISMLRQSRKNRKQ 346
>gi|303230391|ref|ZP_07317152.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
gi|302514930|gb|EFL56911.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6]
Length = 301
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 101/292 (34%), Gaps = 11/292 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G + LWG++ QF+ +++ +++ R L + + + G ++
Sbjct: 7 VIGIILTLLGATLWGVSGTSVQFVGNFRNMNLEWLLTMR-LITAGLLTVLYGWIRQGNAV 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+G+++F +A+ + +++ + + ++ P + + +
Sbjct: 66 FNVFRNWRDTLGLVIFGVFGMALCQYTYFRSIVIAGAGIATVLQYLAPSMIIIYLLMRYG 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+R + +II+ +L ++ + + ++G S V + A S +
Sbjct: 126 KRPSTGEIISVILALVGTICLMGNNGFSFESFRSDVLFWGLLSAVGVAVYSVSPVRLLAT 185
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS-------YGIKR 253
F ++ +G F + T + + VF G+KR
Sbjct: 186 YGTIPIVGFGMLLSGLVAAALFQQPHSYATWDVWTVVGCFNVVFLGTIVSFNAYLEGVKR 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
I+ P+ +L + V + +++ +++ L
Sbjct: 246 IGAVPGSILSSIEPISAAFFGWALLGNQFNWVGILGMAMIIATVIIIALEKR 297
>gi|288932283|ref|YP_003436343.1| hypothetical protein Ferp_1930 [Ferroglobus placidus DSM 10642]
gi|288894531|gb|ADC66068.1| protein of unknown function DUF6 transmembrane [Ferroglobus
placidus DSM 10642]
Length = 274
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/274 (10%), Positives = 79/274 (28%), Gaps = 17/274 (6%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG T + L +S + R +++ +
Sbjct: 10 LLLVALIWGATFPVVKLALNFISPFAFNAIRFVFTSLLFLPFL---------------KR 54
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ V + + F L F V + + + E+L ++
Sbjct: 55 REASAGVKIGVASFLGYTFQTIGLELTTATNAGFITSTYIVFTPIIAAKLYGEKLTRVEA 114
Query: 149 IAALLIILSLLIMTLHSGIP-LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
++ ++ + + +++ S +L + + +
Sbjct: 115 LSVIVAFIGVYLLSGVSSFNTGDALILLCAIAFAFEIAMISEYSKKLQPLSLAGWQVLSI 174
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + E L + LI L + +Y K GI+
Sbjct: 175 GLFSTFPALFFTEKLVLNDYVLLSLLITGLLATFVAKILQNYLQSYTKSVDAGIILSLEG 234
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ V SV +L + + ++ + +V +A ++
Sbjct: 235 VFSHVFSVIVLGETLSALQYLGAFLVFLAAILVS 268
>gi|192293141|ref|YP_001993746.1| hypothetical protein Rpal_4780 [Rhodopseudomonas palustris TIE-1]
gi|192286890|gb|ACF03271.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris TIE-1]
Length = 301
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/285 (11%), Positives = 76/285 (26%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + + W + + + V + + R + ++ +
Sbjct: 17 YLLLSLTSLFWAGNIVLGRAVAGHVPPVTLSCARWVGAMLLLLPFAWPHLRH----DWRK 72
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ M+V SAT A++ + L Q P+ + RL
Sbjct: 73 LRAQWKLMIVLSATGFAINNALSYWGLQYTQALNALLMQSSGPLFVALWSLLLFGVRLTW 132
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+Q L +L +L + L L+ + Y P
Sbjct: 133 MQAAGIALSLLGVLTIILRGDFAALAGIELNRGDLMVAGALCAFGLYSALMPKRPATHPL 192
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ L ++ G + + + F+ G+
Sbjct: 193 SLIVVTTGCGALLLLPFSAWEYASGVRPSADWLSVATLAYVVIFPSMLAYLCFNRGVALI 252
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + P+ V ++ +L + + + +VV + +
Sbjct: 253 GPNRSAPFLHLMPVFGSVMAIVLLGEKPELFHLAGYAMVVAGVFI 297
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 10/131 (7%), Positives = 40/131 (30%)
Query: 174 IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
+ + A G + L + + + L +
Sbjct: 22 LTSLFWAGNIVLGRAVAGHVPPVTLSCARWVGAMLLLLPFAWPHLRHDWRKLRAQWKLMI 81
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + + +G++ + +M+ + PL + + S+ + + ++ +
Sbjct: 82 VLSATGFAINNALSYWGLQYTQALNALLMQSSGPLFVALWSLLLFGVRLTWMQAAGIALS 141
Query: 294 VIAMVVYLLPT 304
++ ++ +L
Sbjct: 142 LLGVLTIILRG 152
>gi|167754014|ref|ZP_02426141.1| hypothetical protein ALIPUT_02301 [Alistipes putredinis DSM 17216]
gi|167658639|gb|EDS02769.1| hypothetical protein ALIPUT_02301 [Alistipes putredinis DSM 17216]
Length = 311
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 102/301 (33%), Gaps = 17/301 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
GTL A + +G+ PL L ++ V+ +R + + ++ L
Sbjct: 2 SEKSKGTLCGIVAAVSYGMNPLGALSLYRAGINTNSVLFYRYALAAVLLAALLLVQKTSL 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + + AV + + S FV PV+ + ++F
Sbjct: 62 RITRREFSVLGL------LGVMFAVSSLTLFMSFHYMDAGIASTLLFVYPVMVAVIMAIF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIP 189
+ER++ + +++ L + + ++ G + ++ +++ R ++
Sbjct: 116 FRERISLVTVLSISLALCGIALLYRGEGGAVLNTAGVVLVMASSLSYALYIVVVNRASLN 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ S + F + + Y + + ++ + + + +
Sbjct: 176 MSSVKLTFYVLLFGVAAIVLYSLCCPDQPLQLLSTPSMWGGWAAMLALIPTVVSLVLMTV 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + +M PL +V V I + G++++A+ + + ++ G
Sbjct: 236 AVHAIGSTPTAVMGALEPLTAVVIGVTIFGELFTARLAAGIGLILLAVTLIVAGKSLHPG 295
Query: 310 K 310
+
Sbjct: 296 R 296
>gi|296503237|ref|YP_003664937.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
gi|296324289|gb|ADH07217.1| drug/metabolite exporter family protein [Bacillus thuringiensis
BMB171]
Length = 304
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 82/263 (31%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ L SVFL E++ I
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|271968082|ref|YP_003342278.1| hypothetical protein Sros_6828 [Streptosporangium roseum DSM 43021]
gi|270511257|gb|ACZ89535.1| protein of unknown function DUF6 transmembrane [Streptosporangium
roseum DSM 43021]
Length = 307
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 78/292 (26%), Gaps = 1/292 (0%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++G + + + WG + + ++ V ++++ R + +F GL
Sbjct: 8 RPLLGAVLLLSVSVAWGSAFPLMKDLIARMPVADLLAERYGIATLALFALRPRCLRGLPE 67
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ V G + + V+ S
Sbjct: 68 STWLTGLLLGLLFGVGQTAQAVALHDLPSSVSGFTVGSYVVITPVLGLVLLGARISGRTW 127
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + +LS S L ++ A G+ +
Sbjct: 128 GAVALALAALTVFTLLSEAEGGAVSLPALAVTLLSAVLYAGHTLVLGNFAGARRDAYAVT 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ G L + + F SYG
Sbjct: 188 VIQLGTIALMTGVLAAPDGLTLPRTTGDWALLGHLSIVACALGFLARSYGQLHVPPVPAA 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
++ PL + +V + +P+ + G++ +AM++ +LP + +
Sbjct: 248 VILSAQPLWVTALAVVMYGEPLTWAVFLGGGLIALAMLLVVLPGGLFRTARR 299
>gi|86143322|ref|ZP_01061724.1| permease, drug/metabolite transporter (DMT) superfamily protein
[Leeuwenhoekiella blandensis MED217]
gi|85830227|gb|EAQ48687.1| permease, drug/metabolite transporter (DMT) superfamily protein
[Leeuwenhoekiella blandensis MED217]
Length = 283
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 92/289 (31%), Gaps = 12/289 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
V A ++ G + + + ++ + R V F + L +
Sbjct: 3 KKAIYAVVLAALIAGSNGILIKAMPSLTTGAIGWFR--------AGVPVLFLLPVLLRTN 54
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L+ ML+F++ I AV FF+ A + ++V P+ + + K +
Sbjct: 55 QLRVKGNTKMLLFASVINAVRTYFFLMAFVYTSVGNAIVLFYVYPLFITIIETTVYKAPI 114
Query: 144 NHLQIIAALLIILSLLIMT----LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ QI+ LL + +A +A +A
Sbjct: 115 SKKQILYMLLAFAGIAFTYADKEFSFESRDFIGMLAAILAAVGYAFFVSIFKRQTQDCNR 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L L V + + + L+ F +F +G+K +T
Sbjct: 175 NQLLFYQNLAGAVLFIPFLFGLKDVELTHMGIGIFYGLLIGIVQFGLFFFGLKHLNATTA 234
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ Y L ++ S FILK+ + I +++I+ S
Sbjct: 235 ASLMYLEVLSAVILSFFILKEQLSWNTYIGGALILISSFFISRLNRKTS 283
>gi|89092729|ref|ZP_01165682.1| hypothetical protein MED92_15523 [Oceanospirillum sp. MED92]
gi|89083241|gb|EAR62460.1| hypothetical protein MED92_15523 [Oceanospirillum sp. MED92]
Length = 286
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 88/285 (30%), Gaps = 9/285 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L I+ L + + ++ R L V +Y L L+
Sbjct: 7 KGFLLTALGVIVLSFDALLIRLV-DTDEFSLLFWRGLLMTLMVSLWTLYRKPELKLV--- 62
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + SA + A+ FF+ A+ P+ + + + E+
Sbjct: 63 ----QLDLPYIRSAILFALSSIFFVSAIHHTSVANVLVIISAQPLFAAIIAQFTIGEKSP 118
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ +A + +L + + +L + A + + V +M
Sbjct: 119 PITWLAIAICMLGIGW-VMQDSWSTPNLTGDLLALACALSLSSKFVNDRAVKDRDMTPAL 177
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ A + G+ G L L+ ++ F + + G R + VG++
Sbjct: 178 VFAGGIIALVGWLWGAPLSLQGNQWGWMLLLCLIVIPIAFILITLGPTRIPAAEVGMLML 237
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + L + I IV++ + + L + +
Sbjct: 238 LETIAGPLLVWLFLSEAPSANTLIGGSIVILTLFTHSLLKLRSKH 282
>gi|319787493|ref|YP_004146968.1| hypothetical protein Psesu_1896 [Pseudoxanthomonas suwonensis 11-1]
gi|317466005|gb|ADV27737.1| protein of unknown function DUF6 transmembrane [Pseudoxanthomonas
suwonensis 11-1]
Length = 302
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/273 (10%), Positives = 73/273 (26%), Gaps = 3/273 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG + L+ + + ++ R+ + + L+ K
Sbjct: 27 LELLVLGAVWGGSFLFMRVAAPEFGPYALVELRLALGALVLLPFLWLARAQFP-LRIWPK 85
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +L A + + F + + L L
Sbjct: 86 LAAIGVVNSAVPFLLFAWAAQRAPAAIGAICNAMVVLFAALVAYLAFGEKIGTRRALALL 145
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ + + L G +++ A A + L
Sbjct: 146 TGFIGVVVLATAKVSGLSVGPAVIAGASAAFLYGVGLNLVKRYMAGLPPAASAAITLGCS 205
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
A+ + + + + L F F I R + Y
Sbjct: 206 AVLLLPL-AIAHWPAQEVSVQAWGATIGLGVLCTGLAFIYFYGLIHRIGAGRTSTVTYLV 264
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
PL + + L +P+ + +++ ++ +
Sbjct: 265 PLFGALFAWLFLGEPVTPTMLLAGAMILGSVAI 297
>gi|153214632|ref|ZP_01949508.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153801691|ref|ZP_01956277.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124115238|gb|EAY34058.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124122784|gb|EAY41527.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 303
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 83/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSAIALLVICAAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA + L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|237749298|ref|ZP_04579778.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229380660|gb|EEO30751.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 306
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/275 (10%), Positives = 81/275 (29%), Gaps = 3/275 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G L+ + +G+ PL+T L + ++ +R ++ + +
Sbjct: 1 MNKVKGYLYGCISSATYGLVPLFTLPLMSRGMHYDSILFYRYFFATLFLGGVLKLTGKSF 60
Query: 79 SLLKDTLKNPK-AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + + S+ L + + + + + F + I
Sbjct: 61 RLERADILPLMGLGSLFALSSLFLFMSYLYMESGIASTILFFYPILVTLIMAIFFKEKIT 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ L + L+ M L + A+ ++ Y V + +G
Sbjct: 121 WATITSIMLAFVGIGLLYKGDKGMPLSMFGIFIVFLSALAYALYIVGVNKTRVNTMDGDK 180
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L + + + + F G ++ + + + +
Sbjct: 181 LTFYALLVGSGIFFIKLKFGTNLEMISGFDSWFDVVMLALVPTVVSCVAMVWAVHNVGST 240
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
I+ PL + + + +P+ + +
Sbjct: 241 VTAILGALEPLTAVFVGIVVFHEPLTVNMAVGIFM 275
>gi|228985777|ref|ZP_04145927.1| Uncharacterized transporter [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773949|gb|EEM22365.1| Uncharacterized transporter [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 304
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGSAFPAIRMGLESHTPEHLTLLRLLIASVILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ SVF+ E++ I
Sbjct: 72 ---IFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFMNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F ++ + + +
Sbjct: 129 GGVISFIGIAFISFSQGDAIQLNSGALFILLAAISESLFFVFQSSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGMYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFVAWIWLGEVPTLVS 271
>gi|225569183|ref|ZP_03778208.1| hypothetical protein CLOHYLEM_05265 [Clostridium hylemonae DSM
15053]
gi|225161982|gb|EEG74601.1| hypothetical protein CLOHYLEM_05265 [Clostridium hylemonae DSM
15053]
Length = 310
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 98/278 (35%), Gaps = 10/278 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A +L+G++ + QF+ V + V RV+ S + + L L
Sbjct: 21 VICLHIAVMLFGVSGVIAQFV-DVPAIMVALGRVVSSSLLLLVIALVKKERLRL-----N 74
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K +++ + ++AVHW F ++ + + ++ P+ FL + +ER++
Sbjct: 75 CRKDYILIILTGIVMAVHWTTFFQSIQVSTVAVGTITFSTFPLFLTFLEPLVFRERISAG 134
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF---FIEMCVL 203
I+ A+++++ ++I + + + + + + L
Sbjct: 135 NIMKAVILLIGVVITIPEFSLDNHITVGIIWGMLCSVTYAVMTLANRYFSGRYAGRIICL 194
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
VV + +F + ++ K K T GI+
Sbjct: 195 YEQGTAAVVLLPALAWVKVSWQFKDVLGVAFIGIICTAFAYSLYVSAQKGVKAQTAGIIS 254
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ ++ ++ +L + +++ + +Y
Sbjct: 255 GMETVYGVLYALILLGEMPTAREIAGGIVIL-GVALYS 291
>gi|206896299|ref|YP_002246527.1| hypothetical protein COPRO5265_0157 [Coprothermobacter
proteolyticus DSM 5265]
gi|206738916|gb|ACI17994.1| hypothetical conserved protein [Coprothermobacter proteolyticus DSM
5265]
Length = 280
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 88/281 (31%), Gaps = 13/281 (4%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + + ++ L + + + +RV + V
Sbjct: 7 ALLGGVLFYSVSSLLVKATTS-PPVTIAFYRVFIATLVVTPF-------WVGDFFRWWKR 58
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
L+ + L + + + Y+L +F + P+ + SVFL+E +N
Sbjct: 59 NFSFPLIVATFGLTLDFVLWFYSLRFTTVAHATFIVNMAPLWVGMMSSVFLREPMNIKGW 118
Query: 149 IAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ +L + +MTL + A A + + + + +
Sbjct: 119 LGIVLGVSGAAVMTLQPSAMQIHAGDLMALGASFGLALYITMTRMSSRNIDSSSVLTYSI 178
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
++ + + F + L + +Y ++ STV +
Sbjct: 179 FFFTCIWLAFAAVLLDQGFVIKGQDFPFVLALALGPQLGGNTLINYALRSLPASTVSVAL 238
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P++ V S F+ +P+ + ++ +A+ + T
Sbjct: 239 LGEPVIATVFSYFLFSEPLSWHVVVGGALICLALYATSINT 279
>gi|16078937|ref|NP_389758.1| cysteine and O-acetyl serine efflux permease [Bacillus subtilis
subsp. subtilis str. 168]
gi|221309770|ref|ZP_03591617.1| hypothetical protein Bsubs1_10346 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314092|ref|ZP_03595897.1| hypothetical protein BsubsN3_10277 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319014|ref|ZP_03600308.1| hypothetical protein BsubsJ_10193 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323288|ref|ZP_03604582.1| hypothetical protein BsubsS_10312 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|6137261|sp|O34416|YOAV_BACSU RecName: Full=Uncharacterized transporter yoaV
gi|2619001|gb|AAB84425.1| YoaV [Bacillus subtilis]
gi|2634270|emb|CAB13769.1| cysteine and O-acetyl serine efflux permease [Bacillus subtilis
subsp. subtilis str. 168]
Length = 292
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 83/287 (28%), Gaps = 5/287 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + ++WG T + + + + L R+ +F + LS+ K+ L
Sbjct: 5 MLGIISVTLIWGYTWVAMKVGIHDIPPLLFSGLRLFIGAVPLFLILFIQRKKLSIQKEHL 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER--- 142
K+ + +L+ + + +G + + FVT + L +
Sbjct: 65 KSYIIMSLLMGLGYMGILTYGMQFVDSGKTSVLVYTMPIFVTVISHFSLNEKMNVYKTMG 124
Query: 143 -LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L + + L I L L A++W K
Sbjct: 125 LVCGLFGLLFIFGKEMLNIDQSALFGELCVLVAALSWGIANVFSKLQFKHIDIIHMNAWH 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
++ + V F L L F F ++ + + + + S +
Sbjct: 185 LMMGAVMLLVFSFIFEAVPSAEWTYQAVWSLLFNGLLSTGFTFVVWFWVLNQIQASKASM 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+L + L + I + ++ + +
Sbjct: 245 ALMFVPVLALFFGWLQLHEQITINIILGALLICCGIFMNTFTFSRRK 291
>gi|326794801|ref|YP_004312621.1| hypothetical protein Marme_1519 [Marinomonas mediterranea MMB-1]
gi|326545565|gb|ADZ90785.1| protein of unknown function DUF6 transmembrane [Marinomonas
mediterranea MMB-1]
Length = 288
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 80/290 (27%), Gaps = 9/290 (3%)
Query: 27 TLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+LWG T +L + + + R L + + I
Sbjct: 3 IFLGLLPPVLWGSTYAAIGLYLTDIPSIWLAFWRALPAGLILLLMIRRAPRVP------- 55
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + ++ Y L + + ++ +L
Sbjct: 56 -FKRVAVLGFINISLFFSFLLIGAYRLPGGVAGTLGATLPLQLILIQWLVFKKKPAVKAL 114
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ I L+ + +L + ++ A+ T+ + S + + L +
Sbjct: 115 MASIFGLIGVALILNPSADLDPIGVAAALFATFLIAVASILMYRWKSDDVIGLAAWQLIL 174
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+F G + GL + + + + +T GI
Sbjct: 175 GGVFLFPIAWVVSGPIVIPSVEQLPGLVWLVGLNTALGYVVMIRALNIFGATTFGIFSLL 234
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
P+ + V + + + + IV+ ++++ + K K
Sbjct: 235 NPVTAVTLGVLFIGENLGGAQWAGIAIVLGSLLLNQVRWHNLRVKQSKLK 284
>gi|156550823|ref|XP_001600949.1| PREDICTED: similar to ENSANGP00000013904 [Nasonia vitripennis]
Length = 348
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 87/300 (29%), Gaps = 26/300 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + + + + + + L +V+ +E+ + R + L ++Y D
Sbjct: 37 LGLVLATLSSLFFSLCSVIVKGLVEVNPMELAAFRFVGVLLPAIPIVIYKG-------DD 89
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
ML+ + + YA S F PV +FLKE
Sbjct: 90 PFPKGRRLMLLLRSFVGTTGLMLSFYAFRHMPLADASVIVFSVPVFVAIFARIFLKEPCG 149
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG--------- 195
+I L ++ ++++T I ++ ++
Sbjct: 150 LFNVITVCLTLIGVVLITRPPLIFGHTVVSLTDNHVETENADLWSAVAAFSATLFGANAY 209
Query: 196 ----------FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
F + M L + ++ G D L ++ L +
Sbjct: 210 VLLRALKGLHFSVIMSNFGSFGLVQTLIVTWAIGALCLPRCGTDRLLVVALALFSFGGQI 269
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + ++ + V I + V + + +V ++++ L
Sbjct: 270 LLTLALQMEQAGPVAIARSADIVFAFFWQVLFFNEIPNRYSVGGAILVTSSVLLTGLRKW 329
Score = 40.3 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 32/75 (42%)
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
L+ + + + Y + L+ ++ ++ P+ + + + LK+P I
Sbjct: 98 MLLLRSFVGTTGLMLSFYAFRHMPLADASVIVFSVPVFVAIFARIFLKEPCGLFNVITVC 157
Query: 292 IVVIAMVVYLLPTVI 306
+ +I +V+ P +I
Sbjct: 158 LTLIGVVLITRPPLI 172
>gi|117921164|ref|YP_870356.1| hypothetical protein Shewana3_2723 [Shewanella sp. ANA-3]
gi|117613496|gb|ABK48950.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
ANA-3]
Length = 309
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 103/308 (33%), Gaps = 21/308 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S PT+ + + WG + L +V L ++ R + + + +
Sbjct: 2 KSDPTIKAVILLIICTFFWGSCFPIGKQVLSEVHALTLVFWRFVIAAVCLAIYLKLVRMP 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + +++ SA + L + S ++P+I+ + V
Sbjct: 62 KLHLSIN----QWLWIILVSAVGIGGLNLGLFTGLASTNATNGSLIMALSPLITSLIACV 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTL-------------HSGIPLLSLAIAVTWSAYCFA 184
L+ + Q + L+ + +L++ H + +A ++ Y
Sbjct: 118 TLRTLPSFAQCFSLLVSLTGVLMVITNGHLETLFSMQINHGDKLIFGGMLAWSFYTYFSQ 177
Query: 185 RKTIPVGSSEGFFIEMCVLA--IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + FI M A I AL E F + +
Sbjct: 178 GISRWMPVIPYTFIGMLSGAAVIGALCLASPEVHPFAELFNSTALGMAEVVYIGVFGTVA 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ ++ G+++ + + P+ +++S F+L Q + ++ + +V+ +++ +
Sbjct: 238 GYLLWLNGVRQLGSANAALFFNFVPIFSVLTS-FMLGQAVTELQLLGIIVVIAGLLLPRI 296
Query: 303 PTVINSGK 310
K
Sbjct: 297 IRFKREPK 304
>gi|163734240|ref|ZP_02141680.1| hypothetical protein RLO149_08349 [Roseobacter litoralis Och 149]
gi|161392248|gb|EDQ16577.1| hypothetical protein RLO149_08349 [Roseobacter litoralis Och 149]
Length = 294
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/298 (16%), Positives = 105/298 (35%), Gaps = 8/298 (2%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFA 70
++ + +G L + A+ + + + ++L +++ R L
Sbjct: 2 AVAAQAIEDRPQLGILMMLVAWYFFAMVDVSAKWLALAGFPAFQLVFMRYAGHLVISVGM 61
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
I L + + +++ A +L YAL + S F +P+I
Sbjct: 62 IAKDGMTLDRFRTDH-----IWLVLSRALLLISATLGNFYALSYLPLTIISAIMFSSPII 116
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
FL LKE++ + A +L +LI+ G I ++A A ++
Sbjct: 117 VCFLSMTILKEQIGPWRWGAIVLGFAGVLIVIRPFGETFHPAMILPLYNATALALYSLMT 176
Query: 191 GSSEGF-FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
G E L + AL ++ F+ ++ DT+ LIG G+L + +
Sbjct: 177 RKLAGIVATETQQLYLGALGTMLTLPFALWFWIPPQSLLDTVLLIGLGVLGWGGHQLLTN 236
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ A +T+ Y+ + + S I D + ++V + ++
Sbjct: 237 AHRFAPANTLMPYTYSFMIYIAAFSWLIFGDVPDFWVVVGALVIVASGLIIWKREQRT 294
>gi|116494168|ref|YP_805902.1| DMT family permease [Lactobacillus casei ATCC 334]
gi|239629542|ref|ZP_04672573.1| permease of the drug/metabolite transporter superfamily protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301065648|ref|YP_003787671.1| drug/metabolite transporter (DMT) superfamily permease
[Lactobacillus casei str. Zhang]
gi|116104318|gb|ABJ69460.1| permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus casei ATCC 334]
gi|239528228|gb|EEQ67229.1| permease of the drug/metabolite transporter superfamily protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438055|gb|ADK17821.1| permease of the drug/metabolite transporter (DMT) superfamily
[Lactobacillus casei str. Zhang]
Length = 324
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 85/294 (28%), Gaps = 10/294 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G F I WG + ++TQ L V L ++ R+ ++ +
Sbjct: 11 HTNQKLKGVSFAVIGAIFWGASGIFTQTLFTDAGVKPLWLVGIRLFFAGLLLLLWS-GVQ 69
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L A+ M+VF+ + + A+ + F+ PV +
Sbjct: 70 EPRMFLAIWKNRHDAILMIVFAFLGMVPSQLTYFLAINAGNAATATILQFLGPVFILLYV 129
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + + ++ L ++ ++ + LSLA A +
Sbjct: 130 AFATHQMPRRIDFVSITLALIGTYLLVTRGHLTGLSLAPAAVFWGIMAGVSQALYTLLPR 189
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY------ 249
+ + ++ + L P + VF
Sbjct: 190 TLLAKYDARAVTGWSMLLGSLPFLPQYVLHPNPLLTLPDFGAIAFVIVFGTMFAYLLVLG 249
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ G++ PL +V L + ++++ ++ LP
Sbjct: 250 SLNYISPVATGMLSAFEPLTATTLAVTRLHIAFGPAEWLGGILIILNTLLQALP 303
>gi|99034995|ref|ZP_01314795.1| hypothetical protein Wendoof_01000370 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 304
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 93/289 (32%), Gaps = 8/289 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G + + + +++L + EVI R L+S + ++Y+
Sbjct: 9 LLGVTWFILSLLSSVANDTISKYLSLHLQSFEVIFFRFLFSTITLVPFMLYYGRE----- 63
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + + +L V + Y L + F P+ + L L E
Sbjct: 64 --AFKTSQISIQITRGVLLFVGITLWTYGLAIFPIVTATIISFSIPLFVILLAIPLLNEN 121
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + ++ + + I T + S FA I + +
Sbjct: 122 IIWQRWSVTVIGFVGIAITTKAYSEDFNPKILIFIVSTLIFAILDILNKKLAIKESVISM 181
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L AL +++ ++ L ++ + + L+ G+ ++ + + +
Sbjct: 182 LFYSALTTTIFSTVPLLFYWHLPSLLELVLLLILGINSNLILFFTLKAFALTDATALAPY 241
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
Y ++ + + I + D I++ + + + KN
Sbjct: 242 RYIELIISAIVAYVIFNELPDKSALYGILILIPSTLFIVYSESKVIKKN 290
>gi|305666902|ref|YP_003863189.1| hypothetical protein FB2170_11591 [Maribacter sp. HTCC2170]
gi|88709127|gb|EAR01361.1| hypothetical protein FB2170_11591 [Maribacter sp. HTCC2170]
Length = 305
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 94/295 (31%), Gaps = 17/295 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + ++ L F Y++WG T L + + ++ + R + + VF
Sbjct: 2 SKTQNPLLIILAFFSIYVIWGSTYLLNKIAVSEIPPFLLAGIRFVTAGILVFLIAKILGN 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+S+ KN +V L G ++AL + P+I + L
Sbjct: 62 TVSITWRQFKN-----TIVAGFLFLTFGNGIVVWALKFVDSGFAALEISAQPLIVLLLMR 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFAR 185
V +++ + II +L + + ++ I + ++ + + +
Sbjct: 117 VLQGKKVQTMSIIGVVLGFIGIYLLVSQKEIINQENSVLGMIMIFVCMLSWGYGSLFVGK 176
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
+P +M + + + L+ + F
Sbjct: 177 ADLPKNYFVNTGYQMLAGGVMLIIASLAFSEKWPSPLEWSAPVKYSMLLLIVFGSIVAFT 236
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F+Y +K V Y P++ I+ + L + I I +++ +
Sbjct: 237 SFNYLLKVVSPEKVATSTYVNPIIAILLGWYFLDEQITFQSIIAAIVLLTGVYFI 291
>gi|239617734|ref|YP_002941056.1| protein of unknown function DUF6 transmembrane [Kosmotoga olearia
TBF 19.5.1]
gi|239506565|gb|ACR80052.1| protein of unknown function DUF6 transmembrane [Kosmotoga olearia
TBF 19.5.1]
Length = 275
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 85/279 (30%), Gaps = 17/279 (6%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ + + + ++ + Q+ + + R + I + L
Sbjct: 7 LYLAITLLFFSSMEIVSKPLMGQIDPFFMTAFRFFIGGLFLMPLI----------EKKLP 56
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + V F ++ + P+ F E+ +
Sbjct: 57 PREIILLTMIGSLNTIVSMTFLQLSVKFGNASTAATLIATNPLFVTIFAPFFGSEKPSKR 116
Query: 147 QIIAALLIILSLLIMTLHS------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ I L + +LI L + A++++ Y K +
Sbjct: 117 KFIGTFLGFVGILIFISGMLEGDTITGFLFGIGSAISFALYTLLLKPHVLKHGALTATAY 176
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++ F + L + L + + F KR ST
Sbjct: 177 SSFFSGVVYSATLMLFGQFKITSLNLSSWLILLYLGIGVTGIAYFTFFAAAKRIGASTAS 236
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P++ + + L + I + I ++++++++
Sbjct: 237 RVFYLKPVVATLLAFIFLSEEIGAFKLIGIVVIILSLMI 275
>gi|254467071|ref|ZP_05080482.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206687979|gb|EDZ48461.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 301
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/294 (10%), Positives = 72/294 (24%), Gaps = 2/294 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
++W + + + S L ++ R L S L
Sbjct: 4 RAIAMGLAFALMWSSAFTSARIIVQDASPLFSLAVRFLISGLIGVAIARALGQTWRLTPG 63
Query: 84 TLKNPKAVGMLVFSAT-ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ G+ + L +I A L T ++F +
Sbjct: 64 QWRATVIFGICQNALYLGLNFVAMQWIEASLAAIIASTMPLLVALAGWALFGERLRPLGY 123
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
I + +I+S + + + I V +
Sbjct: 124 AGLAAGILGVALIMSTRLSAGVDLLGVGLCVIGVLALTAATLALRGATSGGNFMMVVGLQ 183
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ I + V + F + I+ + R
Sbjct: 184 MLIGSAVLFVAAPLTEDIFVTPSWRLAAAFTYTTIVPGLTATFIWVLLLNRIGAVRAATF 243
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ P+ + + +L + + + + IV ++ L + K + ++
Sbjct: 244 HFLNPVFGVAVASVLLGEKLGPLDLLGVAIVTGGILAVQLARQADRPKAELSRA 297
>gi|288927345|ref|ZP_06421192.1| putative transmembrane permease [Prevotella sp. oral taxon 317 str.
F0108]
gi|288330179|gb|EFC68763.1| putative transmembrane permease [Prevotella sp. oral taxon 317 str.
F0108]
Length = 319
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 87/306 (28%), Gaps = 20/306 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVY 73
N P + +F A + WG+ + + + ++S RV + ++
Sbjct: 14 SSNGGAPPLQAHAAMFLACLFWGLMAPLGKDAMNHGIDGITMVSFRVAGGAALFWLTSLF 73
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + + + L + F L S P+ ++
Sbjct: 74 TRK------EHVPRKDVLRFAGAAVFGLVCNQCCFTIGLSLTSPINASIVTTSMPIFAMV 127
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS----------LAIAVTWSAYCF 183
++ LKE + + L+ LI+ L S A A+
Sbjct: 128 FSAIILKEPITGKKATGVLMGCSGALILILTSAAATNRVQGDIRGDLLCLAAQFSYAFYL 187
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG--GEHFFLGNIPDTLFLIGYGLLNS 241
+ V + + L + + G +G I +
Sbjct: 188 SLFNPLVRRYSVITVSKWMFFWATLLLLPFTGAHVAALPWAQIGGITWLETAYVVVICTF 247
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+C+ G K + + V I Y P++ + SV + + + + +V + +
Sbjct: 248 VCYCLIMVGQKTLRPTVVSIYNYVQPIVSVTVSVLMGIGVLKWAQGLAIILVFGGVWLVT 307
Query: 302 LPTVIN 307
Sbjct: 308 KSKSKR 313
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 35/113 (30%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
I M + + W + F C F+ G+
Sbjct: 53 ITMVSFRVAGGAALFWLTSLFTRKEHVPRKDVLRFAGAAVFGLVCNQCCFTIGLSLTSPI 112
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
I+ + P+ +V S ILK+PI + + ++ +L + + +
Sbjct: 113 NASIVTTSMPIFAMVFSAIILKEPITGKKATGVLMGCSGALILILTSAAATNR 165
>gi|197294913|ref|YP_002153454.1| hypothetical protein BCAS0061 [Burkholderia cenocepacia J2315]
gi|195944392|emb|CAR56993.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 299
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 74/291 (25%), Gaps = 1/291 (0%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYF 74
++ ++ V + W + + L ++ L++ + R + V + +
Sbjct: 8 TSRSARQPLVAAAAVAFTIVSWASAFPFIRIGLHGLAPLQLAAARFATAALLVIAWLAWR 67
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
D + + + L + A T +
Sbjct: 68 RPPRPTKADAWRFLACGLLGIALYNALLNTGEQTVSAGAASFIVNTLPIFTALLAAVFLR 127
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L L +A + +I L G + A SA F + +
Sbjct: 128 ERFNRWGWLGSLVSLAGIAVIAQGQPGGLVLGSGSTLILGAALCSASYFVLQRRLIPVYG 187
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
L A+ W + ++ + + +++ +
Sbjct: 188 ALPCTAYTLLAGAVLLAPWLPGALVSLGGGSRDTALAVVVLGVFPAALGYATWTFALGYF 247
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y P + + SV + + + + ++V L
Sbjct: 248 GAARAASFLYLTPAVATLLSVVLTGERPGIATACGGLLAIAGVIVVALRGR 298
>gi|171057910|ref|YP_001790259.1| hypothetical protein Lcho_1225 [Leptothrix cholodnii SP-6]
gi|170775355|gb|ACB33494.1| protein of unknown function DUF6 transmembrane [Leptothrix
cholodnii SP-6]
Length = 306
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 80/291 (27%), Gaps = 16/291 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G F + + + + V + ++ R+L++LP + G L
Sbjct: 20 GLAFALIGSVAFSGKAIIVKLAYRHGVDAITLLMLRMLFALPLFVGLAWWAGRGKPALTR 79
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + L L ++ P + + LG V L+ +
Sbjct: 80 RDRLTVLGL----GFSGYYLASFLDFAGLAYISASLERLILYLNPTLVLLLGLVLLRRPI 135
Query: 144 NHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
Q+IA + +L + G L+ + ++ + + +
Sbjct: 136 GARQLIALAVSYAGVLAVFGQELKLQGDHVMLGTALVFGSAVSYAVYLLYSGEEVKRLGA 195
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+A G + L L+ + GI+R
Sbjct: 196 LRLTGLATTVACLLCIGQFVLLRPLGSLAAVAPEVLWLSLLNATACTFAPVILVMLGIER 255
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ P+ I+ + IL +P + +V + +
Sbjct: 256 LGAALAAQCGLVGPMSTILMGIVILGEPFTPWLAVGTLLVFTGVWLLARWR 306
>gi|218903802|ref|YP_002451636.1| transporter, EamA family [Bacillus cereus AH820]
gi|228927727|ref|ZP_04090775.1| Uncharacterized transporter [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|218536495|gb|ACK88893.1| transporter, EamA family [Bacillus cereus AH820]
gi|228831790|gb|EEM77379.1| Uncharacterized transporter [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 304
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 80/262 (30%), Gaps = 13/262 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGSIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I RA S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVR 286
P+ + L + V
Sbjct: 250 LTPITACFVAWIWLGEVPTLVS 271
>gi|28211053|ref|NP_781997.1| transporter [Clostridium tetani E88]
gi|28203492|gb|AAO35934.1| transporter [Clostridium tetani E88]
Length = 277
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/279 (10%), Positives = 87/279 (31%), Gaps = 11/279 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G +F +++ I + + + EV R ++F +
Sbjct: 4 GVIFAILTSLVFSIMNALVKAVSLSIPSTEVAFFRSFIGTILLYFIM--------KGNKV 55
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + +L+ + A++ + Y + S ++P+ ++ L ++FLKE+L+
Sbjct: 56 KFSKEGIPLLMTRGLLGALYLITYFYTISKIPLTDASILVHMSPIFAIILSTIFLKEKLS 115
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV-- 202
+ + L +++ S+ + +
Sbjct: 116 KNSLYLLPIAFLGAMLLIKPFNYSTYSVEALFGLLSALLSAAAGITIRLLTKRKHHTYEI 175
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ V + F + + +L+ G+++ + V I
Sbjct: 176 IFYFLAIGTVVSIPLMWNSFIMPTPLEFFYLLCIGIVSLLGQVFLTKAFTHESAIVVEIT 235
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y + + K+ DT+ + +++ + +
Sbjct: 236 RYIGIVFNAIWGFVFWKEIPDTLTVLGGVLIITSCIALS 274
>gi|254225598|ref|ZP_04919207.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125621918|gb|EAZ50243.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 303
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSAIALLVICGAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACALSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|325293691|ref|YP_004279555.1| permease protein [Agrobacterium sp. H13-3]
gi|325061544|gb|ADY65235.1| putative permease protein [Agrobacterium sp. H13-3]
Length = 302
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/274 (11%), Positives = 74/274 (27%), Gaps = 5/274 (1%)
Query: 40 TPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSA 98
+ + + +E + L I+ R L + + I L T + +
Sbjct: 24 SYTFIKIGVETIPPLTFIAARTLIAGLLLLAVIRLRGLRLPRDFATWRLFFVQACINSVL 83
Query: 99 TILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSL 158
+ W + F + ++ + + R + + L +
Sbjct: 84 PFTLIAWAEQSIDAGLAVILNATTPIFTFLLTALIIRHEQVSGRKLFGTVAGMTGVCLII 143
Query: 159 LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV----LAIPALFYVVWN 214
+ L+ L IAV +A+ +A I + G M + L V
Sbjct: 144 GLDALNGAGEALWSQIAVLTAAFSYACAAIFSKNFRGLDPVMPAAGSLICGAVLLLPVSV 203
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
T + + F ++ ++ Y + +
Sbjct: 204 IVDRPWTLSPSPASLTALVCLSVFSTALAFMVYFRLMQTLGSVGTTSQAYLRVPIGVAIG 263
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ L + + V+ ++ LP+ S
Sbjct: 264 MVFLGEVPTPAMWVGLVCVIAGVLAMTLPSRRRS 297
>gi|323964302|gb|EGB59785.1| integral membrane protein [Escherichia coli M863]
gi|327250588|gb|EGE62296.1| hypothetical protein ECSTEC7V_4670 [Escherichia coli STEC_7v]
Length = 301
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q +A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYLAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL L + + ++ + +K S +
Sbjct: 192 LYAALVMSAVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|227498940|ref|ZP_03929079.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904391|gb|EEH90309.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 295
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 79/294 (26%), Gaps = 13/294 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ + +W + + + + V + R +F+
Sbjct: 3 QKWSAFFYLVFTFFIWSNNYIGGKVIAEAVPPSVLAMIRSFIGTSCLFWMA------RKE 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK + + V + + + PV+ L LK
Sbjct: 57 LKTPIDQKDRKWFFLIGMLAYFVTFQMVQLGIKLAGASTAALINSTNPVVITLLAGFILK 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV------TWSAYCFARKTIPVGSSE 194
E L ++ + L +L I+T + + I ++ + + +
Sbjct: 117 ESLTVIKRVCLFLALLGTFIITQGASGSGEIMGILFMIISVLSFGFASIQMRRLTQKYAP 176
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+L L V S E L + L + + ++ +
Sbjct: 177 ILITFYGMLIGSLLSLPVGIYSSLREPVSLTPFVVLVLLYLGIMGSGVAQFTWTKALSEL 236
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
ST + + V ++L + + ++ +++ T N
Sbjct: 237 PASTCSLFYPLQAVFSAVLGAYLLGESFTVHFYLGLILISADILLNFWDTRRNQ 290
>gi|330752157|emb|CBL87117.1| protein containing DUF6 [uncultured Flavobacteria bacterium]
Length = 312
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 97/306 (31%), Gaps = 17/306 (5%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
N + P + ++ +WG T + + + + L ++ +RV + + +
Sbjct: 5 SPNDNSPISIHYFWMHIIVFIWGFTGVLGRLIS-IDALPIVWYRVSLATVFMGLFFQFKK 63
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L + ++ + + I + P L
Sbjct: 64 RPFLFPNKRLFFLLFLNSIIIVLHWITFYHTIKISNVSLTLA-----CLSTGPFFVSILE 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------VTWSAYCFARKTIP 189
+F K ++ +I+ L I+ +LI+ +++A+ + R
Sbjct: 119 PIFFKRKIYISEILLGLGIVTGMLILIESVQDNEIAIALGLISALLSALFSVLNGRIVNK 178
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + EM + +I Y+ +NG +I + SF F
Sbjct: 179 MKPLDISIWEMGIGSISLGVYLAFNGGLIQVISSPTPNDWIYLIILASVCTSFAFVQSVR 238
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILK--QPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+K TV + P+ I+ ++ I + ++ + + ++ V L +
Sbjct: 239 IMKYLSPFTVVLTIAMEPVYGIILAIIIFGSTETMNPMFYLGASTILA---VISLDAYLK 295
Query: 308 SGKNKT 313
K K
Sbjct: 296 KRKRKR 301
>gi|260770162|ref|ZP_05879095.1| protein of unknown function DUF6 transmembrane [Vibrio furnissii
CIP 102972]
gi|260615500|gb|EEX40686.1| protein of unknown function DUF6 transmembrane [Vibrio furnissii
CIP 102972]
Length = 309
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 97/294 (32%), Gaps = 21/294 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S TM + + WG + L +V L ++ R + + + I
Sbjct: 2 KSDSTMKAIVLLIICTFFWGSCFPIGKHALSEVHALTLVFWRFVIAAACLGLYIKAARMP 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + + ++ SA + L S ++P+++ + +
Sbjct: 62 KPHL----SSRQWLWVIAVSAVGVGGLNLGLFTGLTYTNATNGSLIMALSPLMTSLIACI 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTL-------------HSGIPLLSLAIAVTWSAYCFA 184
L+ + Q + L+ + +L++ H + +A + Y
Sbjct: 118 ALRTLPSFAQCFSLLVSLTGVLMVITNGHLETLFSMEINHGDKLIFCGMLAWSLYTYFSQ 177
Query: 185 RKTIPVGSSEGFFIEMCVLA--IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + F+ M A I A+ + + E + + T +
Sbjct: 178 GISRWMPVIPYTFVGMVSGAAVIGAMCLLSPDVQPFVELWNSSALGMTEVVYIGVFGTVA 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ ++ G++ + + P+ +++S F+L Q + ++ + +V+
Sbjct: 238 GYLLWLNGVRHLGSANAALFFNFVPIFSVLTS-FLLGQAVTQLQLVGIAVVIAG 290
>gi|229099248|ref|ZP_04230179.1| Transporter, EamA [Bacillus cereus Rock3-29]
gi|228684066|gb|EEL38013.1| Transporter, EamA [Bacillus cereus Rock3-29]
Length = 301
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 94/288 (32%), Gaps = 14/288 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WGI ++ L + + +E + R++ + P + + L ++
Sbjct: 8 LLILSVVMIWGINYTIAKYGLVEFTAIEFTAIRMMAAAPLLLLLTFFIEKSL-----YVE 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++V S + ++ F+ + S ++P+ + +E+ +
Sbjct: 63 RKDIPRLIVVSFVGIVLYQTLFMETVKYTSATNASLLISISPIFTTLFAVFLKQEKFSSR 122
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++I +++ + ++ + G + + A I S+
Sbjct: 123 KLIGSMIAFVGAALVLVAGHSLASSFYGNGIGMITSICWGLYPVLAGPLIKKYSALRVTA 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ L + + L + F ++ G+++ S
Sbjct: 183 WSALVGAIPLLLLSGPHVFVMPFHITKGMTLFALLYSIFFVTVFGLVMWYIGVQKIGASH 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y P++ ++ + + I + I I+ + L V
Sbjct: 243 TMVYMYITPIVAVLFAAIWANESISVQQMIGGIIIFFGLWFVKLEKVK 290
>gi|170290108|ref|YP_001736924.1| DMT family permease [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174188|gb|ACB07241.1| permease of the drug/metabolite transporter (DMT) superfamily
[Candidatus Korarchaeum cryptofilum OPF8]
Length = 285
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 85/283 (30%), Gaps = 17/283 (6%)
Query: 29 FVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ +LWG + L+ ++++ L + + R+ + + L
Sbjct: 11 LLIILSVLWGASFLFMGILVKELPPLTISASRLTIASLLIGILASRRPKNLPWR------ 64
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV-FLKERLNHL 146
+L+ + + ++ + S +P + E++N
Sbjct: 65 ----ELLILGVLNNTIPYALILWGQRYVSSSVASIINSTSPFFTSIFAHFLTDDEKINKF 120
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ L +L M S L +A+ + C++ T+ + +A
Sbjct: 121 SMMGISLGFSGVLAMAWDSAQGSLIGELAIITAVICYSYATVYGRRFYSMGLSPLDIAFG 180
Query: 207 AL-----FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
L + + + + IF ++RA + +
Sbjct: 181 QLSTAAATSIPLAILERPWLAMPSQRAWVSIIGISVFSTALAYLIFFRILERAGATNANL 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ P+ + L + ++ + +++ +++ L
Sbjct: 241 VTLLIPVTATLLCTAFLGERLELRHIVGMCLIMTGLLIMNLRG 283
>gi|310768202|gb|ADP13152.1| putative DMT superfamily transporter [Erwinia sp. Ejp617]
Length = 304
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 89/281 (31%), Gaps = 5/281 (1%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
MM LF A ++W + + ++ + + +R L +L + +
Sbjct: 1 MMNFLFPLLAVLIWSVNAIVSKLSAAAIDPAAISFYRWLVALMVLAPFALPGVWRHRQQV 60
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
V L+ ++ + G + + +T ++SV + +
Sbjct: 61 KQSWWKLLVLGLLGMVMYQSLAYYAAHSVSALFMGIIAALIPLLTVLLSVVVIRLAPTLG 120
Query: 143 LNHLQIIA----ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ +++ L+ L G+ L + V ++Y +
Sbjct: 121 ILLGCLLSFCGLVWLVSQGNPAQLLTHGLGKGELMMFVASTSYALYGVLTRRWAIPLPNW 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + I ++ GF L L L + ++ G+ R S+
Sbjct: 181 QSLWMQIFFGVMLLTPGFLLASDVSLNAHNLPLVLFAAIPASVIAPFLWIQGVMRLGASS 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ V +V L + + + I GI + +++
Sbjct: 241 SSMYMNLVPIFTAVIAVSFLHEALHSYHFIGGGIALAGVIL 281
>gi|302387277|ref|YP_003823099.1| protein of unknown function DUF6 transmembrane [Clostridium
saccharolyticum WM1]
gi|302197905|gb|ADL05476.1| protein of unknown function DUF6 transmembrane [Clostridium
saccharolyticum WM1]
Length = 295
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 88/290 (30%), Gaps = 9/290 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ T +G + T L R+ ++ + ++
Sbjct: 1 MKTNIGLYLTLLFGVFSLSTSAVFVRLANAPSAITAFFRLFFAALVLLPFLLASKEKKRQ 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L K + + S +L+ H+ + +L ++ + P+ S+ +G FLK
Sbjct: 61 LLSLSKK--QWALGILSGLLLSAHYMLWFESLRHTSVASSTVIVTLQPLFSIAIGFFFLK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL-------AIAVTWSAYCFARKTIPVGSS 193
ER + L I ++ I ++ +A + + F
Sbjct: 119 ERFHKLAIGGCMVAIAGCFMIGWGDFQISSQALFGDLLAFLAAGFISIYFFVGQAIRKEL 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ ++F + F + F IF++ ++
Sbjct: 179 SAVSYSVISYLSSSVFLGGYAMLERSSFAGYPAATWLAFGGLALISTVFGQFIFNWLLRW 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + + + + + FIL + I + + ++ +V++ L
Sbjct: 239 IPATVISMSILGETIGTCILAYFILNEAITLQQGLGIATILSGLVIFFLS 288
>gi|296274670|ref|YP_003657301.1| hypothetical protein Arnit_3149 [Arcobacter nitrofigilis DSM 7299]
gi|296098844|gb|ADG94794.1| protein of unknown function DUF6 transmembrane [Arcobacter
nitrofigilis DSM 7299]
Length = 293
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 98/284 (34%), Gaps = 8/284 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + I+WG +Y + +S ++V+ RVL+ VF +Y
Sbjct: 4 LAIIAFWALGIIWGSNFIYMKMAADYISPMQVVFFRVLFGFIPVFLYAIYTKSLKLKDLK 63
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + +L G + S F + ++FL + +
Sbjct: 64 YSFHFIVMSLLATVVYYFGFVKGCALLLSGVAGALSGSIPLFSFLLAAIFLKEEKITKLA 123
Query: 144 NHLQIIAALLIIL-------SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
I L ++L +++ ++ + ++ +++V S + +P+
Sbjct: 124 FLGVFIGFLGVVLISDVFNENIMASSMEGMLSMILGSLSVGASFIYAKKYVMPLKLKAEA 183
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + + + + + L + L + I+ Y I++
Sbjct: 184 LTTYQLGFGVLILLFITDFNGINNIWQDTHSALGLVIGLGLLGTGLAYIIYYYMIEKLGA 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ Y P++ ++ +VFI+ + I + I G + + + +
Sbjct: 244 LKASSITYIPPVVALIIAVFIVGEDIKLIDIIATGFIFLGVFLI 287
>gi|290511735|ref|ZP_06551103.1| inner membrane transporter yicL [Klebsiella sp. 1_1_55]
gi|330005884|ref|ZP_08305413.1| Carboxylate/Amino Acid/Amine Transporter [Klebsiella sp. MS 92-3]
gi|289775525|gb|EFD83525.1| inner membrane transporter yicL [Klebsiella sp. 1_1_55]
gi|328536070|gb|EGF62468.1| Carboxylate/Amino Acid/Amine Transporter [Klebsiella sp. MS 92-3]
Length = 312
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 100/298 (33%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L V A +LWG + + QF+ Q+S + R+L++ +
Sbjct: 15 SSKKGMLNVLIAAVLWGSSGVCAQFIMQESQMSSPFLTMTRLLFAGLILLMLGFVHGD-- 72
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L FS F+ + + F++P I V ++
Sbjct: 73 RIFRVLQNRRDALSLLFFSLFGALTVQFTFLMTIEKSNAATATVLQFLSPTIIVAWFALA 132
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L + A + ++ H L IA ++A + +
Sbjct: 133 RKARPTPLVLGAICTSLAGTFLLVTHGNPTTLSISPAALFWGIASAFAAAFYTTYPSTLI 192
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G F + F + S F ++ G
Sbjct: 193 ARYGTLPIVGWSMLFGGAMLLPFYGGQGTDFVVNGSLLLAFFYLVVIGTSLTFSLYLNGA 252
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + GI+ PL + S+ +L + +++ ++V+ + +
Sbjct: 253 QKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILASVVLIAIDSRRRVR 310
>gi|117620104|ref|YP_854573.1| hypothetical protein AHA_0048 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561511|gb|ABK38459.1| putative membrane protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 309
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/306 (10%), Positives = 88/306 (28%), Gaps = 8/306 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + S M L + +LWG ++ Q + ++ + V + R L + +
Sbjct: 1 MRRRITSEIKMRSYLLLLAIGLLWGSQFIFMHQAVTELPPIMVAAGRALCGSLTLGLLCL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ L + + +L + + V WG + + + +
Sbjct: 61 FMR--LKSEHTPWRTYMLIALLDATLPFIMVAWGQQYVDSAIAAVVMGCIPFVTILMAPL 118
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF-----ARKT 187
+ + + +I + +++ L A+A+ + A CF K
Sbjct: 119 LVSGEKITKGGLVSVVIGFVGVLVLFWPKLTSGMNAGLLGAMAILFGASCFAIGLLMIKR 178
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + L + V+ ++
Sbjct: 179 FAKDHPVVVARNILISSAIQLLLAAPFVTDLSALTMPSQHAIGAVAVLGVFCTGLVYFLY 238
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I++A + Y PL ++ L + I + + +++ ++ +
Sbjct: 239 MALIQKAGPTFASFSNYLVPLFGVMLGALFLGEKIQSTTGVALALILGSVALNQWAQQRR 298
Query: 308 SGKNKT 313
+
Sbjct: 299 VQREAA 304
>gi|150397815|ref|YP_001328282.1| hypothetical protein Smed_2617 [Sinorhizobium medicae WSM419]
gi|150029330|gb|ABR61447.1| protein of unknown function DUF6 transmembrane [Sinorhizobium
medicae WSM419]
Length = 325
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 88/287 (30%), Gaps = 16/287 (5%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+++ + WG + + + VS + + + R L +L + +
Sbjct: 33 RAYVYLSITALFWGGNSVAGKMAVGHVSPMMLTTLRWLIALAVILVLM----TPQIRRDW 88
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ +L + A + F A+ P++ K +
Sbjct: 89 QKIRQHWLQLLAYGAIGFTMFNAFLYSAVQYTSAINAVILQAGIPMLIFIFNFALFKMKA 148
Query: 144 NHLQIIAALLIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGS 192
+ Q+I + ++ +LI H L + + ++AY A + P
Sbjct: 149 SFAQVIGFTVTLIGVLITAAHGDLASLVRLSFNFGDALMILACIVYAAYTVALRWKPAMH 208
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ F A+ + ++ + L + ++ G++
Sbjct: 209 WQSFIAAPAFGALLSAIPLLVWEIGKDAAIMPDATGWAIVLYAAIFPSLMSQVLYVRGVE 268
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ P+ + SV ++++ + +V+ + V
Sbjct: 269 MIGANRAGLFINAIPVFGTLLSVLLVEEIFRPFHLVALALVLGGIAV 315
>gi|294628221|ref|ZP_06706781.1| integral membrane protein [Streptomyces sp. e14]
gi|292831554|gb|EFF89903.1| integral membrane protein [Streptomyces sp. e14]
Length = 429
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 72/262 (27%), Gaps = 7/262 (2%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F F A ++WG + L+ + + +V R+++ + A+ L T +
Sbjct: 32 FAFLA-LVWGFSFLFMKVGTRGFAPFQVTLGRLVFGTAVLAVAMAVRRERLPRGARTWGH 90
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
G L+ + + + + + V L
Sbjct: 91 LAVAGFLLNALPFSLFAYSELTIPSTLAGICNATSPLWGMALSLVALSEDRPTRVRVAGL 150
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG-----FFIEMCV 202
+ L ++ L G+ A+A+ S + G +
Sbjct: 151 GLGFLGVLTVLGAWQGFHGLDAGGTAMALLASLSYPVGWIYVRRTLAGSAESHLSLTGGQ 210
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + + V L P L + + +T ++
Sbjct: 211 LLLATVQLAVVTPLFTSVPSRLEAGPLLAIAALGALGTGVAMLVQYGLVAEVGPTTAQMV 270
Query: 263 EYTAPLLMIVSSVFILKQPIDT 284
Y P++ + V +L + +
Sbjct: 271 TYFVPIIAATAGVAVLGEQLGW 292
>gi|209547403|ref|YP_002279321.1| hypothetical protein Rleg2_5401 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538647|gb|ACI58581.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 291
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 81/289 (28%), Gaps = 9/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T + + A L + + + L V L + R + L V +
Sbjct: 5 RTGLAVCMMVAAAFLNSLDAIVVRSLAGNVHPLMIGFFRSFFGLLAV--------SPWIV 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L+ + V A + A + F P+ V + LK
Sbjct: 57 SRVGLRASPYRVLHVVRAGLKLASLVALFIAFAHAPLADATAINFTMPMFLVLGAWLVLK 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER+ + + + ++I+ + A A + +
Sbjct: 117 ERVGVSSVAGIVAGFIGVMIIIRPGASGFDQWLLFALGGAVLTAASQLMLRRMALRDSAD 176
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++A + V + + + L G L +F + + A S +
Sbjct: 177 RLVAWNLITTVPLGLIVMLPVWSMPSWSQLGLLAMQGALGAFNMTLITRAFGMAAASVLA 236
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+++ ++ + + + I +++ A ++
Sbjct: 237 PLDFLRLPVVALMAFLFFSEIPAPQTWIGAAVIIGATIIGTGGMAWRRK 285
>gi|127513773|ref|YP_001094970.1| hypothetical protein Shew_2845 [Shewanella loihica PV-4]
gi|126639068|gb|ABO24711.1| protein of unknown function DUF6, transmembrane [Shewanella loihica
PV-4]
Length = 308
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 96/296 (32%), Gaps = 10/296 (3%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L+ A +LW + L + L+++ V S+ + + + +
Sbjct: 8 YLYALAAILLWSTVATAFKLALSHFTPLQLVFVAVSTSIVALGVILAATGKLHLIKRQFA 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P +++ A + ++ L LK++L
Sbjct: 68 SRPWFYL--QTGLLNPFLYYLVLFKAYALLPAQQALSLNYTWAILLPLLAVPLLKQKLRK 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIE 199
+ AAL+ L + ++ + + + +A+T + + +
Sbjct: 126 SDLTAALVAYLGVFVIATNGEVASVRFESATGVLLALTSTLLWSLYWIVNTKDEGDPVVS 185
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK-LST 258
+ + + L +++ + F ++ +K+A ++
Sbjct: 186 LLLSFLVGLPFILVTLLLTQSLPSWDLKALGAGIYVGLFEMGVTFVLWLVALKKADRTAS 245
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + P+L + +IL++ I I G+++ A+ + L + + KT
Sbjct: 246 MSTLVFITPVLSVGFIAWILQETITPSTFIGLGLILTALALQQLLPQLKRLRTKTA 301
>gi|324324981|gb|ADY20241.1| hypothetical protein YBT020_04975 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 295
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 88/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ LE + +I+ R + + + ++++ + +T+K
Sbjct: 9 LMLLLVTFFWGASILLTKVGLEGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFETVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFRIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVVQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 185 GLFSLIFSFIIETPKLPSTINSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ +
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILVSVLIAEVD 281
>gi|301052477|ref|YP_003790688.1| drug/metabolite transporter superfamily permease [Bacillus
anthracis CI]
gi|300374646|gb|ADK03550.1| permease, Drug/Metabolite Exporter family [Bacillus cereus biovar
anthracis str. CI]
Length = 303
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 92/275 (33%), Gaps = 15/275 (5%)
Query: 37 WGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + ++ S + + S R + ++ + + + K + +++
Sbjct: 16 WGGNFVVGKSLVDHASPMTLTSLRWMIAIVCLLPMVWF-----KEKKIIPPRAAILPLIL 70
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ +A+ F AL + + +FLKE+ N LQI++ +L
Sbjct: 71 MGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKANTLQILSMILSF 130
Query: 156 LSLLIMTLHSGIPLLS---------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++++ L LL IA ++ + + + I
Sbjct: 131 FGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYSGIF 190
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ ++ + T L + ++ G+++ +T GI
Sbjct: 191 GVILLLPFNIGSFTVTNINTSFITSLLYTGLISTVLCMVFWNVGVQKLGATTSGIFLNFN 250
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ + + L + + ++ + IVV ++
Sbjct: 251 PIFTAILAFLFLGEELTWIQILGTMIVVTGCYLFS 285
>gi|296331402|ref|ZP_06873874.1| putative transporter [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305676388|ref|YP_003868060.1| putative transporter [Bacillus subtilis subsp. spizizenii str. W23]
gi|296151517|gb|EFG92394.1| putative transporter [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305414632|gb|ADM39751.1| putative transporter [Bacillus subtilis subsp. spizizenii str. W23]
Length = 296
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 89/287 (31%), Gaps = 12/287 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVS-VLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LFV A WG T + S L + R+L + A+ +K
Sbjct: 8 LFVLIAAFFWGTTGTVQAMAPESSTPLAFGAFRLLIGGSAMLLAVWISRE------LHVK 61
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
N +L + + FF T T + P+I+ + LK+R +
Sbjct: 62 NWSWPLVLAAAVCMACYQPLFFTAVKETGIAVGTVIAIGSAPIIAGSMEWAILKKRPRNS 121
Query: 147 QIIAALLIILSLLIMTLHSGI-----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
IA +L + ++ + +A+ S + + + ++
Sbjct: 122 WWIATVLALAGCWLLFSDGSNVRIDVTGVLMALGAGASFAGYTLISKAMMKNQPPRATSA 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+ + + + + + L L + + +F G+ S
Sbjct: 182 VVFMISAILLTPLLWQSDISWILTPRGLGTSLYIGLIATCAAYFLFVKGLTGVPASAAVT 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ PL + VF + + + + ++++ ++V
Sbjct: 242 LSLAEPLTASLLGVFFIGEMLSFSSWLGITLMMLGLLVISAAPRKQK 288
>gi|294628537|ref|ZP_06707097.1| integral membrane protein DUF6 [Streptomyces sp. e14]
gi|292831870|gb|EFF90219.1| integral membrane protein DUF6 [Streptomyces sp. e14]
Length = 342
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 85/273 (31%), Gaps = 4/273 (1%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+LW + + S + R+L + + G + +
Sbjct: 46 AAASVTVVLWASAFVSIRSAGAAYSPGALALGRLLAGAVALGALCLLRREGWP-PRAAWR 104
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
G+L F ++ ++WG T + + + + + LG L L
Sbjct: 105 GIAVSGLLWFGFYMVVLNWGEQQVDAGTAALVVNTGPLLIALLGARLLGDAMPPRLLAGL 164
Query: 147 QI--IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+ A+ + LS+ S + ++ +A A+ + +G +
Sbjct: 165 AVSFAGAVTVGLSMSGGGGSSVLGVVLCLLAAVGYAFGVVAQKPALGHGSALQVTTFGCL 224
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
I A + + G E + + F ++Y + R S +G Y
Sbjct: 225 IGAAACLPFAGQLVHEAARAPLSATLNMVYLGVFPTALAFTTWAYALSRTTASRMGATTY 284
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
P L+++ S +L + + + + +
Sbjct: 285 AVPALVVLMSWLLLGEVPGVLTLAGGVLCLAGV 317
>gi|269966063|ref|ZP_06180153.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269829210|gb|EEZ83454.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 301
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/291 (10%), Positives = 89/291 (30%), Gaps = 13/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + + + +
Sbjct: 3 YLLPFFTVMIWGGNSIVNKMTASAIEPSAMSFYRWFVAMVLLTPFCLPAI----IKQRHI 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT + + P++SVFL L + ++
Sbjct: 59 IRPYLAKLAFLALLGMVLNQSLGYYAGLTTTASNMALITSLVPLLSVFLSVPLLGKSISM 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA--------IAVTWSAYCFARKTIPVGSSEGFF 197
L I+ ++ + L M H I + V Y +
Sbjct: 119 LSIVGGVISLGGLAFMLGHGDITYFLHQDLTQGDSLMLVAAMVYAAYCVLLKRWKMPFSS 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + ++ + E L + F ++ I
Sbjct: 179 LTLVYMQGFFSVLMLTPLWLSSEQLLPSQDALPLIAYAGIAASIFAPLMWVKAIDSIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ ++ + ++ + I I +V+ +++ +
Sbjct: 239 SSAMFMNLMPVVSVILASTLIGEKIYAYHIIGGLLVISGVILSQVKVRQRK 289
>gi|228921345|ref|ZP_04084669.1| Uncharacterized transporter [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838290|gb|EEM83607.1| Uncharacterized transporter [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 304
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 82/263 (31%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+F A ++ Y T S VTP+++ L SVFL E++ I
Sbjct: 72 ---FFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ +++++L G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIVLISLSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I R S
Sbjct: 189 LSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYITLAYIISRTGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|254500187|ref|ZP_05112338.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
gi|222436258|gb|EEE42937.1| Integral membrane protein DUF6 [Labrenzia alexandrii DFL-11]
Length = 301
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 76/279 (27%), Gaps = 6/279 (2%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + C +WG + ++ + + ++ L ++ RV + ++ +
Sbjct: 7 ILLICLGAIWGGSFIFAKVAVAEIPALTLVFFRVASACLALWLVLWAQGTLEQFPLKMAA 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ A+G+L + G + + F V V L
Sbjct: 67 SFLAMGLLNNVIPFSLLFAGQTVIGAGLASILNATTPVFTVLVAGVLFRQETLGIHKIAG 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-----FIEMC 201
+ + L L A +A +A +G
Sbjct: 127 IALGIAGVATMLSGSLSGIVSDPLWAQAACLGAALSYAFAATFAKRFKGLPPLISATGQL 186
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + I L + + ++ + A + +
Sbjct: 187 SGSTLIMAPIALFASRSWSVADPSVIAWLNVLALGIFATALAYLMYFRLLAEAGATNASL 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ P + +L + + ++ F +++ +VV
Sbjct: 247 VTLLVPASALFFGWLLLGEELSAIQLAGFALLLSGLVVL 285
>gi|222110560|ref|YP_002552824.1| rard protein, dmt superfamily transporter [Acidovorax ebreus TPSY]
gi|221730004|gb|ACM32824.1| RarD protein, DMT superfamily transporter [Acidovorax ebreus TPSY]
Length = 300
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 7/291 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL-- 81
+ G + A +L+G L + ++ RVL +LP ++ +
Sbjct: 2 IQGLVASIVASVLFGAMYYLAPALAPLDGEQIFGWRVLCTLPFTTALLLARGQWPRVRLL 61
Query: 82 -KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P L+ SA +L V F++A L + S YF+ P++ V G V +
Sbjct: 62 AARAWRQPLLALGLLASAAMLGVQLWLFLWAPLHGRALPVSLGYFLLPLVMVLAGRVLYR 121
Query: 141 ERLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL+HLQ +A L + + G+ + +A+ ++AY R+ + G +++
Sbjct: 122 ERLSHLQWLATALAGAGVLHEVLRAGGMSWETWLVALGYTAYFVLRRRLATDHLGGHWLD 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M +L AL++VV S + G+L++ ++ + L
Sbjct: 182 MLLLVPAALWFVVRAPSSLPLVLEH--AHLWAMVPVLGVLSAVALALYMAASRLLPLGLF 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G++ Y P+L+ + L + I + +G + A+ + +L + +
Sbjct: 240 GLLSYVEPVLLALV-ALALGESIGAAQWPTYGPIFAAVALLVLDGALRLRR 289
>gi|86356062|ref|YP_467954.1| putative permease protein [Rhizobium etli CFN 42]
gi|86280164|gb|ABC89227.1| putative permease protein [Rhizobium etli CFN 42]
Length = 303
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/278 (11%), Positives = 74/278 (26%), Gaps = 5/278 (1%)
Query: 37 WGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLV 95
WG + + + +E + + +I+ R L + + + + L + T + L
Sbjct: 24 WGSSYTFIKIGVETIPPVTLIAVRTLIAGAILLAVLRHRHVRLPRDRATWRLFVVQACLN 83
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
+ W ++ F + R + I
Sbjct: 84 SVIPFTLIAWAEQSVDAGLAVILNSATPIFTFLLTVSITRHEQATARKLFGVVSGLAGIC 143
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
L + + L L +A+ + C+A I + G + V+
Sbjct: 144 LVIGVEALGGLGESLMAQLAIILATICYAGAAIFSKNFRGLDPAVPAAGSLISGAVILMP 203
Query: 216 FS----GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
S L + F I+ ++ Y + +
Sbjct: 204 VSLIVDRPWGLDPSAASVLALLGLSAFSTALAFTIYFRLVQTLGSVGTTSQAYLRVPIGV 263
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ L + + I V++ ++ +P +
Sbjct: 264 AIGIVFLGESLSPTAWIGLTCVILGVIAMTMPRTTQAR 301
>gi|304311100|ref|YP_003810698.1| hypothetical protein HDN1F_14620 [gamma proteobacterium HdN1]
gi|301796833|emb|CBL45045.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 85/290 (29%), Gaps = 9/290 (3%)
Query: 12 KGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFA 70
+ L+ + + G L++ + + L S + ++ R L+ L +
Sbjct: 9 QNLAAGSMKSDAVRGALYLLIGEFFLALMVALIKLLSPDTSQIAMVFFRNLFGLLALLPL 68
Query: 71 IVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVI 130
I + + + GM F A + Y + I
Sbjct: 69 I-------AHKRIATLKTERFGMHFFRACTGVTGMYLYFYVIGHMPMAEAVLVRLSVAFI 121
Query: 131 SVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
L ++L+ER+ ++ LL + + + +A+ +A + +
Sbjct: 122 LPILTWLWLRERITLRTFLSILLGFVGVTFILRPGTEAFQPIALIGLLAAVFQGESVVAI 181
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGG-EHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
++ L + + +LIG G+ + +
Sbjct: 182 RKMSLTEPGHRIVFYFGLIATGISAIPFFLFTPTYPSGDTLYYLIGIGITATLGQLFITE 241
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
K A +G+ Y+ + + + I +++ A +V
Sbjct: 242 AYKIANPGQIGLYTYSCVIYAAAIGWLFWDETLLLSTLIGTALIITAGLV 291
>gi|300774216|ref|ZP_07084083.1| drug/Metabolite exporter family transporter [Sphingobacterium
spiritivorum ATCC 33861]
gi|300758895|gb|EFK55724.1| drug/Metabolite exporter family transporter [Sphingobacterium
spiritivorum ATCC 33861]
Length = 301
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 95/298 (31%), Gaps = 10/298 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + G + VF +GI + + + + ++ EVI +VL+ + ++
Sbjct: 1 MEKLKGAIAVFLGASSFGILSTFVKKAYAQNFTLAEVIGMQVLFGMVILWAIYFGVRIFN 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
D V ++ S + + + L I + +
Sbjct: 61 KERLDKYPKKTKVWTILISGFSTGLVSILYYKCVSLVPASLAIVLLMQYIWIGALIEFIL 120
Query: 139 LKERLNHLQIIAALLIILSLLI--------MTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
+ + + Q I ++I+LS L+ + + +A T A
Sbjct: 121 FRSKPSRKQAIGIVVILLSTLLATGLVDKGIASFDLAGIGYGLLAATGYASFLIVNGRVG 180
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ + + LG+ LI +F+YG
Sbjct: 181 NDYPPIQKSGLMVTGSCILIFILFRPLSLFTGELGDGIWYFGLILSIFGTVLPPLLFAYG 240
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
I + +S I+ + + S F+L + + ++ I I+++ ++ L +
Sbjct: 241 IPKIGVSLSSILSAAELPVAVCMSYFVLTEQVTLLQWIGVVIILLIVIWMNLNKEKAT 298
>gi|218676007|ref|YP_002394826.1| putative transport protein [Vibrio splendidus LGP32]
gi|218324275|emb|CAV25577.1| putative transport protein [Vibrio splendidus LGP32]
Length = 297
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 85/287 (29%), Gaps = 13/287 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F +WG + + + + +R +++ + + + + +
Sbjct: 3 YLLPFFTVCIWGANAIVNKLAASTIEPSAMSFYRWFFAMLILTPFCI----RPVMKQWAV 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + ++ YA LT + + P+ISVFL L + ++
Sbjct: 59 IKPNLSKLAFLGFLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLHKSISS 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARKTIPVGSSEGFF 197
L I+ +L + L +M + + Y +
Sbjct: 119 LSIVGGVLSLSGLALMLGKGDPLFFMHQELTQGDGYMLIAAFVYASYCVLLKRWKMPISS 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + E L + ++ I
Sbjct: 179 WVVIYIQGLFAVAMLTPLWLTSEQLLPPQQAIPLIAYAAVAASILAPWMWVKAIDTIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + P++ IV + L + I+ I +V+ +++ +
Sbjct: 239 SSAMFMNLMPVIAIVLASTWLGEKINQFHIIGGVMVISGVILAQIKR 285
>gi|319427402|gb|ADV55476.1| protein of unknown function DUF6 transmembrane [Shewanella
putrefaciens 200]
Length = 311
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 95/302 (31%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++ A LW + L S L+++ VL S+ + + +
Sbjct: 2 KSSNLAYVYGMAAVFLWSTVATAFKIALSYYSPLQLVFVAVLTSIIALTSILAWQKKLSL 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + L+ P + +++ A + V+ L + L
Sbjct: 62 LKQQFLRRPMFYLVT--GLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
K+ L I AAL+ + I+ I S +A+T + +
Sbjct: 120 KQHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGLALTSTLLWCLYWIVNTKDQ 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L ++ + F ++ +K
Sbjct: 180 GDPVVSLLLSFLIGLPFIGMTLVLTDALPSFSLKAIFAGMYVGLFEMGITFVLWLMALKT 239
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A + + + M + +P++ I +IL++ I + ++ M++ L K
Sbjct: 240 ATRTANISTMVFLSPVMSIGFIAWILQETIAMTTYLGLAFILSGMMLQQLLPRYTERKRS 299
Query: 313 TK 314
K
Sbjct: 300 GK 301
>gi|56750531|ref|YP_171232.1| hypothetical protein syc0522_d [Synechococcus elongatus PCC 6301]
gi|81299833|ref|YP_400041.1| hypothetical protein Synpcc7942_1024 [Synechococcus elongatus PCC
7942]
gi|56685490|dbj|BAD78712.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168714|gb|ABB57054.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 330
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 81/264 (30%), Gaps = 15/264 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A LWG T + ++Q+S L V R L + + + L
Sbjct: 22 LQLAIATALWGGTFTAGRIAVQQLSPLAVACGRYLLATTVLLLIL-----WQREGWPPLN 76
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + +A++ F L + + P +++ +RL
Sbjct: 77 RRQQLLLFGLGVSGIALYNWLFFIGLSLIPASRAALIIALNPTAIALGAAIWTGDRLRSW 136
Query: 147 QIIAALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
Q L ++ +++ G L+L V + S +
Sbjct: 137 QWAGVGLSLIGAILLLGSRQAGALTLPGWGDLALVGCVLCWTVYSLLARQALRSLSPLTV 196
Query: 199 EM-CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L +W G + + + FC+++ GI+R +
Sbjct: 197 TTGACCWGSVLLIGLWLGQGAQLPVNVSFSTGSAIAFLGLGGTALAFCLYANGIERLGAA 256
Query: 258 TVGIMEYTAPLLMIVSSVFILKQP 281
G+ P+ +L++P
Sbjct: 257 RAGLFINLVPVFGSAIGALLLQEP 280
>gi|23098063|ref|NP_691529.1| hypothetical protein OB0608 [Oceanobacillus iheyensis HTE831]
gi|22776288|dbj|BAC12564.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 303
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/285 (9%), Positives = 83/285 (29%), Gaps = 3/285 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ V + + ++ + + + ++R+L+++ + ++
Sbjct: 9 YIAVGIGVLSISTSAIFVRLASEAPASIIANYRLLFAVLLLLPIVIGKYRHEFKNITRKN 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
++ +F A + Y + L S + + FL
Sbjct: 69 WFLSILAGIFLAMHFIFWFESLNYTSVASSVVLVSMQPIFAFIGTYFLFGERFSSGTIIS 128
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK---TIPVGSSEGFFIEMCVL 203
I + I+ SG +A+ + V
Sbjct: 129 IAIVIIGSIIIGFNDFQISGDAFFGDILALLGAVAVTIYFLSGQQVRKHVSLITYTFVVY 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++N + F +F+ + +F++ +K +T+ +
Sbjct: 189 GASTVTLILFNIIKQEDFFHYPADHWWIFIALAIIPTFLGHSLFNWSLKWLSTATISMAI 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+ + +V L + + + I++ + ++++
Sbjct: 249 VFEPIGASILAVIFLGETPTWAQLLGGTIIIFGLFLFIVSISRKK 293
>gi|85703832|ref|ZP_01034935.1| membrane protein, putative [Roseovarius sp. 217]
gi|85671152|gb|EAQ26010.1| membrane protein, putative [Roseovarius sp. 217]
Length = 290
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/286 (9%), Positives = 71/286 (24%), Gaps = 2/286 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ L ++W + + L + R L S + L +
Sbjct: 3 IRAILMGLGFALMWSSAFTSARIIVSAAPPLTALGLRFLISGLIGIAIALLLGQTWRLTR 62
Query: 83 DTLKNPKAVGMLVFSAT-ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ G+ + L I A L T + +
Sbjct: 63 AQWRATIIFGICQNALYLGLNFVAMQTIEASLAAIIASTVPLLVGLISWAFLGERLGKIG 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ +A ++II+ + + IAV A+ +
Sbjct: 123 IFGLVAGLAGVVIIMGARLQGGMDFYGVGLCVIAVFALAFATLSVRGAASGGNFLMVVGL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + A+ + FL + ++ ++R +
Sbjct: 183 QMIVGAVLVGTVGLATEPFVVEWSARLILAFLYTTLIPGLAATLVWFLLVERIGATRAAT 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ P + + +L + + I +++ ++ L
Sbjct: 243 FHFLNPFFGVAIAAMLLNEALRLGDLIGVLVIMGGILAVQLSRQKR 288
>gi|229110125|ref|ZP_04239701.1| Uncharacterized transporter [Bacillus cereus Rock1-15]
gi|228673317|gb|EEL28585.1| Uncharacterized transporter [Bacillus cereus Rock1-15]
Length = 304
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ L SVFL E++ I
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIVTAILASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + Y I RA S
Sbjct: 189 LSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALGYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|218551065|ref|YP_002384856.1| permease [Escherichia fergusonii ATCC 35469]
gi|218358606|emb|CAQ91254.1| putative permease [Escherichia fergusonii ATCC 35469]
Length = 301
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 88/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGTLVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q +A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYLAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVASLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|196032382|ref|ZP_03099796.1| transporter, EamA family [Bacillus cereus W]
gi|195995133|gb|EDX59087.1| transporter, EamA family [Bacillus cereus W]
Length = 304
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ L VFL E++ I
Sbjct: 72 ---IFLFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F +T + + +
Sbjct: 129 GGVISFIGIAFISFSQGGSIQFNSGGLFILLAAVSESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFVAWIWLGEVPTLVS 271
>gi|154707273|ref|YP_001424053.1| transporter, drug/metabolite exporter family [Coxiella burnetii
Dugway 5J108-111]
gi|154356559|gb|ABS78021.1| transporter, drug/metabolite exporter family [Coxiella burnetii
Dugway 5J108-111]
Length = 297
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 84/279 (30%), Gaps = 8/279 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L + A+++ + + + + ++ + + L + ++
Sbjct: 7 RNLRIGVLILIIAFLIGAVQNALIKSIRVNYPAIVIVFIQYAFCLLILLPSLFKHGFATM 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K +L+ + + ++ YAL T + P+ + ++
Sbjct: 67 KSKHVG-------LLMLRSMMGIGYFFGMFYALKTVPLVDVTLLANTGPLWVPLICLLWE 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ ++ ++ + ++ + + ++ S C +
Sbjct: 120 GVPISWRLYGGIIVGLIGVALVLMPNDRVFSVESLFALGSGLCLGFAMVAARRLSQTESA 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L L + + + + LI +L + G R S +
Sbjct: 180 QRILIYYFLTATLATLPFAIMEWKAPTLFQWVILITNAILMLIHQQLIYLGCSRGPASQL 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I Y++ + ++ K+ I + +V+
Sbjct: 240 SITTYSSVIFSVILGWIFWKENITPLTIAGILLVIFGSY 278
>gi|326622844|gb|EGE29189.1| carboxylate/amino acid/amine transporter [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
Length = 308
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 85/288 (29%), Gaps = 4/288 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 7 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLSAGMLLMAFLLLRGEKL 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ T+ +L+ L + + F S F G
Sbjct: 65 PPLRQTINAALIGLLLLAVGNGLVTVAEHQNVPSGIAAVVVATVPLFTL-CFSYFFGIKT 123
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 124 RKLEWVGIAIGLAGIILLNSGGNLSGNPWSAILILIGSMSWAFGSVYGSRIALPVGMMAG 183
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + G + + Y I+ +
Sbjct: 184 AIEMLAAGVVLLCAAFLSGEKLATLPGLSGFMAVGYLALFGSIIAINAYMYLIRNVSPAL 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y P++ ++ + + + + G++V A+V+ L +
Sbjct: 244 ATSYAYVNPVVAVLLGTGLGGERLSPIEWAALGVIVFAVVLVTLGKYL 291
>gi|269928552|ref|YP_003320873.1| hypothetical protein Sthe_2637 [Sphaerobacter thermophilus DSM
20745]
gi|269787909|gb|ACZ40051.1| protein of unknown function DUF6 transmembrane [Sphaerobacter
thermophilus DSM 20745]
Length = 305
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/281 (11%), Positives = 81/281 (28%), Gaps = 13/281 (4%)
Query: 30 VFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + + + +S L +++ R++ + L + L +
Sbjct: 9 LLLLAAIWGSSYALIKIAVAGISPLTLVAGRLVLGAALLLVTARMMGLRLPRERTQLLHL 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + L + W + +F + L ERL ++
Sbjct: 69 TVMAVTGNILPFLLIAWAEERVTSSLASILNATTPFFTLLLAVSVL----RTERLTLGKV 124
Query: 149 IAALLIILSLLIMTLH--------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ ++ + I+T SG +L+L + FA V
Sbjct: 125 VGIVVGFTGVAILTGADLTNLGSASGQGVLALLASSACYGVGFAYARRYVRGEPLAISAT 184
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ L V F L ++ + + ++ I +
Sbjct: 185 QISIAAILLAPVALLFGDVASTNLTPANAAAWITLGLIPTGVAYILYYRLIAGIGATRTS 244
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y P++ + +L + + + ++ + + +
Sbjct: 245 YTTYIIPIVGVAWGWLLLDEALGLDALLGVAVIFLGLAIAS 285
>gi|237807010|ref|YP_002891450.1| hypothetical protein Tola_0234 [Tolumonas auensis DSM 9187]
gi|237499271|gb|ACQ91864.1| protein of unknown function DUF6 transmembrane [Tolumonas auensis
DSM 9187]
Length = 295
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/292 (9%), Positives = 76/292 (26%), Gaps = 15/292 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L A + ++ + V +++ R L V I
Sbjct: 3 QSDYLTGLLLAILAATGFACKAIFVKLAYRYGVDGTTLVTIR----LLLVLPLIATMRLL 58
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L +++ + L T + + P ++V L +
Sbjct: 59 RKSPATALSWHDRGMIILLGLLGYYLSSLLDFLGLETVSASIERLILCLYPTLTVLLSAW 118
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+K ++ A L ++++ + + + + S
Sbjct: 119 LMKTSISRRMWSAMALTYCGMVLVLTPDFAGARLDLLGIFFVVASTVTYAFYLTWSPAVI 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHF---------FLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + L + + +I + +
Sbjct: 179 RRIGAMRFAELGLTISALAMFVHYLLTRPVETLLHQPLPVWGYGMIMALVATVLPIYALA 238
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ R ++ P+L I S+ IL + + V+ +V+ + +
Sbjct: 239 AAMARIGAGKTALIGSVGPILTIFLSIGILDEHLSPVQWAGVCVVLTGIWLV 290
>gi|167836137|ref|ZP_02463020.1| hypothetical protein Bpse38_06566 [Burkholderia thailandensis
MSMB43]
Length = 310
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 85/294 (28%), Gaps = 17/294 (5%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ LWG + L+ + + + V +++ RV + ++ L+
Sbjct: 7 FLLIVLAALWGASFLFIRVGVTEFGVAPLMALRVGIGAVFLVALMLTRYSPRELVAL--L 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
A + V A + F +A LT +TS TP+ + ++LK+ L+
Sbjct: 65 RKHAWPLFVVGLLNSAAPFCLFAFAELTLSAGVTSVINATTPLWGALVAYLWLKDSLSLP 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV---- 202
+ + ++ +L + A +A A + G
Sbjct: 125 RALGLVIGFAGVLTLVWDQVFSPHGANPASPATAALAAAAALGATLLYGIAANFTKRKLT 184
Query: 203 ----------LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ A ++ + + L + IF Y I
Sbjct: 185 GVDPLVNATGSMVGATILLLPFALATWPAAPVSTHAWGSVLALGIACTGVAYFIFFYLIA 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + + P+ I+ L + + IV++ +
Sbjct: 245 HIGPARAITVTFVIPVFGILWGALFLGEHVSFAMLEGCAIVLLGTALATGVIRR 298
>gi|68250014|ref|YP_249126.1| hypothetical protein NTHI1675 [Haemophilus influenzae 86-028NP]
gi|68058213|gb|AAX88466.1| hypothetical protein NTHI1675 [Haemophilus influenzae 86-028NP]
gi|309973137|gb|ADO96338.1| Putative permease [Haemophilus influenzae R2846]
Length = 300
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 82/288 (28%), Gaps = 7/288 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ + F+ AY + ++ + Q + E + R L L + ++
Sbjct: 14 MQSHSIPSLYHKAISFMVSAYFSITLMNVFVKTASQTIPASETLFSRFLIGLLFLLPFVI 73
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + K + + + + + + L I +
Sbjct: 74 ----KDRDFKVDTRQWKFLILRNAAGVSNMLINFYVVKFLPLSIAV--LLMNTSALFIPI 127
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L K LN L + +S++++T H+G + A I +
Sbjct: 128 LLLFFHQKTPLNVLLCSLIGFLGVSIILLTNHNGNVDPIYVLIGLSGAVLAGMAFIGLQE 187
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L + + N+ + L+ G + + K
Sbjct: 188 LNKYNTPKNIVFYFHLIGTFMLPVFFINQWKIPNLYELGLLLLVGGFGLIFQLLLTRAFK 247
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
A + + +T + V + + I+V A+ +
Sbjct: 248 YAPANIITPFAFTGVVFSSVFDWLFWHHTPNLYFWLGAVIIVGAVSLL 295
>gi|87120976|ref|ZP_01076868.1| hypothetical protein MED121_10215 [Marinomonas sp. MED121]
gi|86163814|gb|EAQ65087.1| hypothetical protein MED121_10215 [Marinomonas sp. MED121]
Length = 290
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 76/272 (27%), Gaps = 1/272 (0%)
Query: 28 LFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ +WG + L+ + V + +I+ R+ ++ + F L L K
Sbjct: 7 FYLLLLAAIWGSSFLFMRVSAPVFGPVWMIALRIGFAALFLGVVAYSFKKHLYLAKHWRH 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + A L T+ + F + + L L
Sbjct: 67 YCILGLLSAALPFLCYGFAAGDLTASLMSIINATTPVFGTVISAIYFKQKLARETILGLL 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I + +I+ + + L + Y A V +
Sbjct: 127 LGIIGVSVIVGFDAELFKTDAWVSVLIVLGAPICYGLASTFTQVSKGVEPLPNAYGTMLM 186
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+++ ++ + + IF + S+ + +
Sbjct: 187 GTLFLLPMLLFYRPLAEPTIEISLAVILLGVVCTGVAYLIFFKLLNEIGTSSTLTVTFLV 246
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
P+ ++ V L + + + +V+ V
Sbjct: 247 PVFGVMWGVLFLDESVGWHTLVGTLLVIAGTV 278
>gi|331698420|ref|YP_004334659.1| hypothetical protein Psed_4658 [Pseudonocardia dioxanivorans
CB1190]
gi|326953109|gb|AEA26806.1| protein of unknown function DUF6 transmembrane [Pseudonocardia
dioxanivorans CB1190]
Length = 337
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 85/284 (29%), Gaps = 17/284 (5%)
Query: 19 ASLPTMMGTLFVFCA--YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
A+ G + A Y+LWG T L + + V L R + + ++
Sbjct: 11 AARTGRPGAAWAALAVVYVLWGSTYLGNKLVIVAVPPLLTGGFRFVVGGVAMSLLLLAVR 70
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G + + A L + + G V I +
Sbjct: 71 G--PSVFRMSRRQFATCALTGLLLPAWGNGLVTLGQENVSSGVAALLIASVPLWIVLLRA 128
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL----------HSGIPLLSLAIAVTWSAYCFAR 185
+ R +A + L++L++ ++ + +A A
Sbjct: 129 LTGDRPRPATFIGVAIGIAGLAVLLLGGTSGGSGGVSGNAWWGPWIVLLAGLGWAVGTFS 188
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVV--WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
T + + + + + + + + + + ++ + +
Sbjct: 189 STKLPTPANPLTLVAVQMTVGGVILLAVGFGKGDRVDFGSVPAVSWWAWVYMALVASCCG 248
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
F F+Y + R +STV Y P++ ++ V + + V+
Sbjct: 249 FSAFAYTLDRLPVSTVATYAYVNPVIAVLLGVLVAGERFSPVQI 292
>gi|301155125|emb|CBW14589.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 295
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/289 (16%), Positives = 112/289 (38%), Gaps = 6/289 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L A +L+G ++ L+ +S ++ +R+L++ P V +++ F +L++
Sbjct: 2 LRGILISLLASLLFGYMYYFSTLLKPLSGTDIFGYRMLFTFPFVALSVIMFKQKQALVEH 61
Query: 84 TLKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++ F++A SF Y + P++ V G + K
Sbjct: 62 LKRIKNRPLFALSYIICGALMGYQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRIIFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ L+ IA ++ + ++ + G + F+ + + G F
Sbjct: 122 ERISTLKFIAVVIAAVGVISNIVLKGGLSWEAIVICVGYTTYFSIRKALKNTDLGAF--C 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ V + + N L+ GL++ + ++ +G
Sbjct: 180 LEMIALLPVSVYFALQTDFATVQESNPNIWGLLVLLGLISGSALIAYVIASNMLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ Y +LM++ S I + +D +F +V+AM + + V
Sbjct: 240 LLGYVETILMVIISFLI-GEKMDADSYPLFICLVLAMSLIIFDGVYKQR 287
>gi|291525535|emb|CBK91122.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Eubacterium rectale DSM 17629]
Length = 275
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/268 (10%), Positives = 81/268 (30%), Gaps = 7/268 (2%)
Query: 33 AYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
A + + + + + ++ R + + G + KD+ K
Sbjct: 2 AGFFFALMTFFVRMSGDLPTMQKAFFRNAVAAVAAVILLAKSDEGFKIKKDSWKGLFLRS 61
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ I YA+ + ++P ++ + LKE+ N + + +
Sbjct: 62 FFGTTGLI------CNFYAVDHLAIADANILNKLSPFFAIIMSYFVLKEKANKTEWLCVV 115
Query: 153 LIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYV 211
+ + + S + + I V T + ++ ++F
Sbjct: 116 TAFIGAVFVVKPSMNVQFFNAMIGVIGGFGAGVAYTFVRKLGKQGERGPVIVMCFSVFSC 175
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ + + L+ G + + +A + + +Y+ +
Sbjct: 176 IVTAPFLFVGAKPMSAYQIVMLLFAGAAATGGQLSITKAYTKAPAKEISVFDYSQVIFAA 235
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ L+Q D + I + I++ + +
Sbjct: 236 LLGFVFLQQIPDYLSVIGYVIIIGSAIF 263
>gi|254555706|ref|YP_003062123.1| transport protein [Lactobacillus plantarum JDM1]
gi|254044633|gb|ACT61426.1| transport protein [Lactobacillus plantarum JDM1]
Length = 341
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/312 (11%), Positives = 91/312 (29%), Gaps = 29/312 (9%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
L++ + +++ + + + +++ R + + L
Sbjct: 2 KKAYLYIAISTLMFSSMEIALKMAGSAFNPIQLNLIRFFIGAIVLLPFAL---RALKQTG 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L + + + V + A+ Q + + PV ++ + L+ER
Sbjct: 59 RKLVSADWRLFALTGLVCVIVSMSLYQLAITVDQASTVAVLFSCNPVFALLFSYLILRER 118
Query: 143 LNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L +I+ ++ ++ LLI+ G+ L + +R G
Sbjct: 119 LGRANLISVVISVIGLLIIVNPAHLTNGLGLLLAIGSAVTFGLYSIISRYGSVKRGLNGL 178
Query: 197 FIEMCVLAIPALFYVVWNGFS-------------------GGEHFFLGNIPDTLFLIGYG 237
+ A +V + + L
Sbjct: 179 TMTCFTFFAGAFELLVLAWITKIPAVANGLTAIGLRQFAAIPVLVNVNLNYFWLLFFIGV 238
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ F + +++ +ST ++ + P L + + IL + I + +++I
Sbjct: 239 CVTGGGFAFYFLAMEQTDVSTASLVFFIKPGLAPILAALILHEQILWTTVVGIVVILIGS 298
Query: 298 VVYLLPTVINSG 309
VV +
Sbjct: 299 VVTFVGNRFRER 310
>gi|83953762|ref|ZP_00962483.1| Possible transporter, RhaT family, DMT superfamily protein
[Sulfitobacter sp. NAS-14.1]
gi|83841707|gb|EAP80876.1| Possible transporter, RhaT family, DMT superfamily protein
[Sulfitobacter sp. NAS-14.1]
Length = 289
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 93/295 (31%), Gaps = 11/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G L + + + + I ++ + + + + ++I +V L
Sbjct: 1 MDNLRGALIMVLSMLGFAIEDMFIKLIGTDIPIGQIIFMLGTGGALCYGAMVVMKGEPLM 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + T+ V A++ S TP++ ++FL
Sbjct: 61 DRAMLTRPILLRALGEIVGTLGFV------SAIVLTPISSASAILQATPLVVTLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ + + A L+ +L +L++ +L++ + + +
Sbjct: 115 GDPVGWRRWSAILVGMLGVLLVIRPGMDSFQALSLLAVLGVLGLSLRDLATRRVPKSTST 174
Query: 200 MCVLAIPALFYVVWNGFSG---GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + L V + G F + LF+ + ++ ++
Sbjct: 175 FQLSFLAFLALVPASLLFMLGTGTAFAPMSGVQWLFMGAALTTGMVAYYGIVAAMRIGEI 234
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
S + Y L +V + I + D + + I+V + +Y + +
Sbjct: 235 SFITPFRYARLLFAMVVGITIFGERPDLLTYVGATIIVAS-GIYTVWRERKVKEQ 288
>gi|330954258|gb|EGH54518.1| hypothetical protein PSYCIT7_23391 [Pseudomonas syringae Cit 7]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 80/286 (27%), Gaps = 13/286 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
G +F A L + ++ L + V + + + + +
Sbjct: 1 MQSNFSKGVIFALSAAALNATIGVLSKVLMSNGFTSSSVAVIKTILGCILLSIVLRFLKR 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
S + + I + + + S+ LG
Sbjct: 61 PTSAA------KWSQAAICAFLGIFVLFHFETSAYRHYAAAGVVVVLMASASISSIILGR 114
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK-----TIPVG 191
+ LK+ + + A L I + ++ +L A S +G
Sbjct: 115 LLLKDAITANATVGAALAISGIAVIFGADLQQGFTLEGAALASIAGCGYGAFSVAMKKMG 174
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S G +L +L+ ++ G L ++ L L F + I
Sbjct: 175 VSGGLHFTRQLLFFGSLYLLMPAAADGFVIGELSSMAIAALLALAALPTILGFFCTTKAI 234
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ K S V +E T PL + + L + +++ +
Sbjct: 235 EYLKPSQVQALELTEPLFAALLAFVALNEVPRESLYPGAALIIAGL 280
>gi|315182677|gb|ADT89590.1| protein of unknown function DUF6, transmembrane [Vibrio furnissii
NCTC 11218]
Length = 309
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 97/294 (32%), Gaps = 21/294 (7%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S TM + + WG + L +V L ++ R + + + I
Sbjct: 2 KSDSTMKAIVLLIICTFFWGSCFPIGKHALSEVHALTLVFWRFVIAAACLGIYIKAARMP 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + + ++ SA + L S ++P+++ + +
Sbjct: 62 KPHL----SSRQWLWVIAVSAVGVGGLNLGLFTGLTYTNATNGSLIMALSPLMTSLIACI 117
Query: 138 FLKERLNHLQIIAALLIILSLLIMTL-------------HSGIPLLSLAIAVTWSAYCFA 184
L+ + Q + L+ + +L++ H + +A + Y
Sbjct: 118 ALRTLPSFAQCFSLLVSLTGVLMVITNGHLETLFSMEINHGDKLIFCGMLAWSLYTYFSQ 177
Query: 185 RKTIPVGSSEGFFIEMCVLA--IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + F+ M A I A+ + + E + + T +
Sbjct: 178 GISRWMPVIPYTFVGMVSGAAVIGAMCLLSPDVQPFVELWNSSALGMTEVVYIGVFGTVA 237
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ ++ G++ + + P+ +++S F+L Q + ++ + +V+
Sbjct: 238 GYLLWLNGVRHLGSANAALFFNFVPIFAVLTS-FLLGQAVTQLQLVGIAVVIAG 290
>gi|288962397|ref|YP_003452692.1| hypothetical protein AZL_d03220 [Azospirillum sp. B510]
gi|288914663|dbj|BAI76148.1| hypothetical protein AZL_d03220 [Azospirillum sp. B510]
Length = 366
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 91/300 (30%), Gaps = 20/300 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
M G L CA WG + ++ L++V+ + ++ ++ S+ ++ I+
Sbjct: 40 HRTAKMRGALAAACAAFCWGGATVLSKSALDEVTPIALLVLQLSASVVVLWSVILLTRRP 99
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ ++ + +A +L + L++ + + ++ V L +
Sbjct: 100 VPPWRNCRVITLLGLLEPGAAYLLGL------IGLVSIRAGDATLIQAFEAIMIVVLSAC 153
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-------------PLLSLAIAVTWSAYCFA 184
LK R ++ + + + L + G L + A+
Sbjct: 154 LLKVRPTAGFVLLSAVALAGLAVTLGAFGPRDGAGSPFGIAMVFLATAGAALYVVLSSRL 213
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
G + A G + + + + F
Sbjct: 214 LVDHDPIVVVGLQQLSALALALAALPFEMLWGGTGTVLPTSAGSWGITIASGVIQYALAF 273
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ + + + + G P+ + + L + + ++ ++A+ V +
Sbjct: 274 SLYMFALSKIPANLAGSFLNLTPVFGLAIAFIALGEALSGIQLASAATTILAVTVIQFQS 333
>gi|288556307|ref|YP_003428242.1| DMT family transport protein [Bacillus pseudofirmus OF4]
gi|288547467|gb|ADC51350.1| DMT family transport protein [Bacillus pseudofirmus OF4]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/301 (8%), Positives = 82/301 (27%), Gaps = 13/301 (4%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ ++WG T + ++ R L + ++ L
Sbjct: 2 NRKAVIMASITILIWGSTFAAIRASLQGGYDAGHLVLVRYLIASSLFLLYALWPKVSFKL 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ ++V ++++ + + T P+ + + + LK
Sbjct: 62 PH----TRDLLRIVVLGWVGISLYHIGVTFGMETVSAGTAGMLIGAAPIFTALIALIGLK 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY-------CFARKTIPVGSS 193
ER N ++ +L++TL + S++ + F + +
Sbjct: 118 ERPNAAGWFGLIVGFTGILLITLGTSSEGFSISTGAFFVLMAAVATSIFFVFQKPLLMRY 177
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + ++ L + ++ +
Sbjct: 178 SPIELTAYFTWAGTIPFFLFAPGLVTSLQQASLEAHLAALFVGIFPAGIAYVTWAIALSN 237
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V M Y P++ ++ + L + + I + + +++ L +
Sbjct: 238 GNAGAVTSMMYAEPVIAVIVAWLWLSEWPAALSLIGGAVALSGVLIVQLLGSRPRQTKQK 297
Query: 314 K 314
Sbjct: 298 A 298
>gi|291296319|ref|YP_003507717.1| hypothetical protein Mrub_1941 [Meiothermus ruber DSM 1279]
gi|290471278|gb|ADD28697.1| protein of unknown function DUF6 transmembrane [Meiothermus ruber
DSM 1279]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 87/288 (30%), Gaps = 5/288 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G L + Y++W T L + L + + R + + + + +
Sbjct: 4 SRAGLLHLLVVYLVWSSTYLAFKIGLLNGFEPFWMGAARFIPAALLLLLYARWRGWQIHP 63
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ L G L++ + + + + + + +
Sbjct: 64 SRQMLGKLALSGSLLWLGGTGLILVATQYVPSGYVALMIATTPIWAAALEGLLDRKPPSR 123
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC---FARKTIPVGSSEGFF 197
+ L ++ L++ ++ + LL+ + + + + E
Sbjct: 124 LLVLGLLTGLLGILALNVPKLSTGTSTNLLAFLLLLISPLMWSSGTILTQRQIANLEPVV 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +++ + G + L + + + ++ LS
Sbjct: 184 VSSYQQLFGGLGFLILSIALGEPWHTPTLLGWASNLYLIVFGSLIAYTSYILAVRLLPLS 243
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
V Y P++ ++ L++P+ + +V++ + + +
Sbjct: 244 LVTTYAYVNPVIALLLGWLFLREPLGIWTWVGGALVLLGVGLVFRSRL 291
>gi|254464846|ref|ZP_05078257.1| Integral membrane protein DUF6 [Rhodobacterales bacterium Y4I]
gi|206685754|gb|EDZ46236.1| Integral membrane protein DUF6 [Rhodobacterales bacterium Y4I]
Length = 303
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 79/259 (30%), Gaps = 8/259 (3%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
+ L++ R L++ + A++ G + +
Sbjct: 40 APLHPLQISHGRFLFAFMAISTAVLILRPKF--------TRPHWGYHIGRTSFGWAGVTL 91
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
++ + F+ PV + L L ER+ + AAL+ +L +I+ +
Sbjct: 92 MFASVAYIPLADATAITFLNPVFGMLLAIPLLGERVGPWRWGAALIAMLGAMILLRPTPA 151
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
A+ +A + I + G + VL + L + + + + +
Sbjct: 152 SFQPAALLALGAAAVMGLELIFIKKLAGREAPLQVLWVNNLLGLAIASCAVLPVWQMPSS 211
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
L GLL + F G+ RA S V Y + + D +
Sbjct: 212 AQWAALAVLGLLMACAQACFINGMARADASFVAPFSYATLVFAALYDFLGFGAVPDAISV 271
Query: 288 IVFGIVVIAMVVYLLPTVI 306
+ I++ V
Sbjct: 272 LGACIILAGAAVLAWREGR 290
>gi|320180332|gb|EFW55264.1| hypothetical protein SGB_02503 [Shigella boydii ATCC 9905]
Length = 301
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V +VFL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAAVFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|291515261|emb|CBK64471.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Alistipes shahii WAL 8301]
Length = 312
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/304 (13%), Positives = 95/304 (31%), Gaps = 24/304 (7%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL-------EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ G ++ A I+WG+ + + V+ + +R++ + + +
Sbjct: 5 KLKGHAALWVANIVWGLNAPIGKSVLWSEANPGGVNPFALSVYRMVGAALLFWTVSLLLP 64
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ +L+ S + ++ F++ L TS V PV+++ L
Sbjct: 65 RER------VARRDIALLLLASVFGIQLNQMLFLWGLSLTSPIDTSIIATVVPVLTMVLA 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS-----------GIPLLSLAIAVTWSAYCFA 184
++FL+E + L+ L LI+ L S G L ++ +
Sbjct: 119 TLFLREPITWLKAGGVFLGCAGALILILVSQHGTGHSSSVMGDVLCIVSAVSYATYLTAF 178
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
R I S M + A + + + ++ L +
Sbjct: 179 RNVIVRYSPVTTMKWMFLFAAIVAVVIYYRPLTAVDYAGLAPRTWAGIGYVVVCSTFLSY 238
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ G + + V + Y P++ ++ +V I + V + +
Sbjct: 239 LMVPIGQHHLRPTVVSMYNYVQPVVAVLFTVAIGLDTFGFTKAGAALCVFAGVWLVTKSK 298
Query: 305 VINS 308
Sbjct: 299 SRAQ 302
>gi|289164061|ref|YP_003454199.1| Predicted transmembrane protein [Legionella longbeachae NSW150]
gi|288857234|emb|CBJ11059.1| putative Predicted transmembrane protein [Legionella longbeachae
NSW150]
Length = 302
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 102/302 (33%), Gaps = 12/302 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+ +S + G F+ A I+ GI + +++ L + +L +++ R + +FF
Sbjct: 1 MLMNKSSTYFLQGMCFLILAQIMVGINIVASKYVLSSIPILFILALRFALAAIILFFLHC 60
Query: 73 YFSGGLSLLKDTL---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPV 129
+ + K + ++ + + + F + L + P
Sbjct: 61 LTPAKKTSISYYFSKLKQKDWLFIIAQALSAGVLFNFFMLGGLQYTDANVAGIITSALPA 120
Query: 130 ISVFLGSVFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAY 181
+ + + L E+++ +II L L I+ L +
Sbjct: 121 LIALMSWIILSEKISGKKIICVGFATLGLAIIGFDKLSGAQASHSFLGDMLVLLSLIPEA 180
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
+ + F+ +L +V+ F + D L L GL
Sbjct: 181 TYYILSKMHPPPLPLFLISSLLNAINAILLVFCLFFCSWDNLSIHYFDWLILFILGLSTG 240
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + G ++ + PL ++ + IL + + T +TI G+V++++ Y
Sbjct: 241 LFYVFWFLGCQKVDGVMASLSTAVMPLATVILAWLILGEHLTTGQTIGMGMVLLSIAAYA 300
Query: 302 LP 303
Sbjct: 301 RR 302
>gi|255035812|ref|YP_003086433.1| hypothetical protein Dfer_2045 [Dyadobacter fermentans DSM 18053]
gi|254948568|gb|ACT93268.1| protein of unknown function DUF6 transmembrane [Dyadobacter
fermentans DSM 18053]
Length = 315
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/310 (10%), Positives = 93/310 (30%), Gaps = 13/310 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYT-QFLEQVSVLEVISHRVLWSLPGVFFAIV 72
+ + T M L YI+WG T + + LE + + R + + + +
Sbjct: 1 MQTSTKTPSTFMVVLAFATVYIVWGSTYFFIQRALEGFPPFFLGAFRFIIAGLLMLGWSL 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF-----FIYALLTRQGFLTSFSYFVT 127
+ K +L+F + + + +++
Sbjct: 61 LQGEQVFSWKVMKPALITGLLLLFVGNGVVIWVEQFLPSAMVAIMVSSAPLWFVLLDKPK 120
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
++ S L + +I + + +L+SG L ++A+ V S
Sbjct: 121 WSENLSNKSTILGLVVGFAGVILLFYEKIMATMSSLNSGRDLFAMALVVLGSMAWAGGSL 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNG-------FSGGEHFFLGNIPDTLFLIGYGLLN 240
+S + + + ++ + + +
Sbjct: 181 YSKYNSVSKSATVNSTWQMLAAGIAFIPGTLLTGEYTSVDLTAIPLNAWLATTYLIVFGS 240
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F + + +K + V Y P++ ++ +F + I ++ +++ ++++
Sbjct: 241 IAGFSAYVWLLKVQPATKVSTYAYVNPVVAVLLGIFFAHETITMMQIAGLVVILGSVLLI 300
Query: 301 LLPTVINSGK 310
L +
Sbjct: 301 NLHQYRKPKQ 310
>gi|118589527|ref|ZP_01546932.1| hypothetical protein SIAM614_03785 [Stappia aggregata IAM 12614]
gi|118437613|gb|EAV44249.1| hypothetical protein SIAM614_03785 [Stappia aggregata IAM 12614]
Length = 307
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 99/289 (34%), Gaps = 10/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M G + + A L G L + V +R + Y + L
Sbjct: 2 TRQMEGMIGLITAQTLLGTIGLCV-LESGADPVTVAFYRCAIGGLALALYCQYRGDLMRL 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ +P+ + M V S ++A +W F + + + ++ + P + V LG+ +
Sbjct: 61 VR---LSPRILAMAVASGMLMAGNWVLFFEGIQRTGIAVATITFHIQPFLVVLLGAFVFR 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSE 194
E+L + ++ + + L + T SG+ L + +A+ ++ TI
Sbjct: 118 EKLRAVTMLWIGVALAGLALATGLSGMELAGDRSYLIGLASTLAAAFLYSGVTIIAKGLT 177
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
G A V+ F+ L + + V+ + + +
Sbjct: 178 GISAPQLATVQFATGTVMLAAFNPASPLTLTADQWGWLAVIGLVHTGGVYVVLYKALPKL 237
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ ++ + P ++ I ++ G++++A + L
Sbjct: 238 TTPVIAVLLFLYPASAVLVDAVAYGHLISFLQLAGLGLIILASLAVTLR 286
>gi|118592406|ref|ZP_01549798.1| hypothetical protein SIAM614_26301 [Stappia aggregata IAM 12614]
gi|118435064|gb|EAV41713.1| hypothetical protein SIAM614_26301 [Stappia aggregata IAM 12614]
Length = 319
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/263 (9%), Positives = 76/263 (28%), Gaps = 18/263 (6%)
Query: 50 VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI 109
+ + R L + + ++ F P+ V +LV + +
Sbjct: 58 IPPDLIGGLRSLLAGIVLLPLLLRFRDHFPQTW-----PERVELLVGGLSGFMAYPLLLS 112
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMT------- 162
+L S P+ + L + L +++ + +L++
Sbjct: 113 IGVLKTSVTHASVILASAPIFTGLLSFLITNRWPRALWWAGSVVSMSGILLLMNARGPAT 172
Query: 163 ------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGF 216
G L+ L++ Y + ++ +
Sbjct: 173 TTGVSATPLGDGLVILSVLFASVGYVYGGRSSSRMGQWPATTWSIAVGALTFAPFTIPQA 232
Query: 217 SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVF 276
+ + + + + ++ + + A + V +++ P++ I +V
Sbjct: 233 LAFDWSTPDTFELSALVFLVLFVTIACYALWFFALGEAGATAVAPLQFLQPVVGIAIAVS 292
Query: 277 ILKQPIDTVRTIVFGIVVIAMVV 299
L + + I G+++ + +
Sbjct: 293 FLGEALSLNILISAGLIIFGVWL 315
>gi|55821599|ref|YP_140041.1| drug/metabolite transporter (DMT) superfamily protein
[Streptococcus thermophilus LMG 18311]
gi|55823527|ref|YP_141968.1| permease [Streptococcus thermophilus CNRZ1066]
gi|55737584|gb|AAV61226.1| drug/metabolite transporter (DMT) superfamily protein
[Streptococcus thermophilus LMG 18311]
gi|55739512|gb|AAV63153.1| permease, putative [Streptococcus thermophilus CNRZ1066]
Length = 304
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/304 (13%), Positives = 105/304 (34%), Gaps = 10/304 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G+L + A I WG + + Q+L ++V + S R++ + + ++ +F
Sbjct: 2 SKQLKGSLMILVAGIAWGFSGVSGQYLMTHGINVNLLTSLRLIIAGILLTASV-FFRQSD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ V + +F+ L ++ ++ A+ + +VTPV+ +
Sbjct: 61 KLVSALKDKKTLVSIALFALFGLVLNQYAYLSAIQHTNAGTATVLQYVTPVLILTFVCAK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ +++A ++ I I+ H L + + +
Sbjct: 121 NRRFPMVSELVAIIMAIAGTFIIATHGQVTELAITPIGLFWGLFSAVTYALYILLPAKAI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G I + + + + L + F + IF G
Sbjct: 181 EKWGSLIVIGLGMLLGGLVFPIAIQAWKYKLPLTGGNLLALFGLVFIGTVFAYTIFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ ++ +V I+ + + ++V+A+++ L ++ K
Sbjct: 241 AMVGAVKGSLLASVEPVASVILTVLIMGDRFFAIDVVGMILIVLAVIIISLKNLVALTKE 300
Query: 312 KTKK 315
K ++
Sbjct: 301 KIQR 304
>gi|300870463|ref|YP_003785334.1| permease [Brachyspira pilosicoli 95/1000]
gi|300688162|gb|ADK30833.1| permease, putative [Brachyspira pilosicoli 95/1000]
Length = 286
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 122/269 (45%), Gaps = 12/269 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S AYI+WG+ P+Y + ++ V+ RV+ + I++ L
Sbjct: 1 MSNNNNKSIFLAASAYIMWGLLPIYWKAVQNFDSAFVLGVRVITTFIFTLIIIIFKKANL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K + ++ + L ++W +IY + + +Y++ P++S+ +G +F
Sbjct: 61 ------YRGIKPLVLIFIAGIFLGLNWYLYIYTVNSGNVLEAGLAYYIAPILSILIGIIF 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG-IPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+E+ L+ +A +L+ + ++ T+ G P+++ I +T+S Y +K E F
Sbjct: 115 FREKKTVLEYLAIVLMFIGMIYQTITLGKPPIMAFFIGLTFSVYGILKKMTIYSGWESLF 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+E + IP++ + + + L+ G+ +++ K ++S
Sbjct: 175 LETLSILIPSIIISKLYFPATPQ-----PTNTWITLMFAGIATGIPLYLYAKAAKSLEVS 229
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
T+G +++ PLL + ++F+ K+ ++ R
Sbjct: 230 TLGFLQFFVPLLATLLAIFVYKEELNFNR 258
>gi|299135200|ref|ZP_07028391.1| protein of unknown function DUF6 transmembrane [Afipia sp. 1NLS2]
gi|298590177|gb|EFI50381.1| protein of unknown function DUF6 transmembrane [Afipia sp. 1NLS2]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 87/280 (31%), Gaps = 12/280 (4%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+LW + T++ + L ++ R+ + + + I + ++ A
Sbjct: 18 VVLWSSGFIGTKYAVSGAEPLTFLTIRMAYVVVLLAIIIAIWRPKWPSPREA-----AHS 72
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ G I L++ + P+++ L + +L ER+ LQ L
Sbjct: 73 AVAGLLIHGFYLAGVSIAIYHHVPAGLSALIPGLQPILTSTLANRWLGERVTPLQWGGLL 132
Query: 153 LIILSLLI------MTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
L ++ +L+ MT G + +A+ + G+ +
Sbjct: 133 LGLVGVLLVLKSRPMTGEVGWGWFATCVALVSITIGTLYQKRFCGNIDWRTGNTIQFVTS 192
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ Y + L+ + + I+RA + V + Y
Sbjct: 193 GILYAIGAWLFETRVVNWSMEFILGVSWLVVALSIGSISVLYWLIRRAAATQVASLFYLV 252
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P + + + + +D + + I + + P
Sbjct: 253 PATTALMAYVLFNERLDVLGIVGMAICAAGVFLVNKPDRR 292
>gi|290999629|ref|XP_002682382.1| predicted protein [Naegleria gruberi]
gi|284096009|gb|EFC49638.1| predicted protein [Naegleria gruberi]
Length = 587
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 51/169 (30%), Gaps = 1/169 (0%)
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A L + + + I LL ++ + +
Sbjct: 365 FALLAPVTPSNVAFMFGLICLLGNTMSYSLYLVTQKTLLDKGVPPLTVTFWSFFFGLAVS 424
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F F + + L + F + + K + VG+ +PL
Sbjct: 425 FISSLYFFPNFNYRRVDLRSILSILYAAIPYGAVQFSLSAIASKMLTPTIVGVYSTISPL 484
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG-KNKTKKS 316
+ I++ VF + I G++++ + V + + KNK+ S
Sbjct: 485 VAIITGVFAFGESPSPWILIGAGLILVGVFVVIGHRYAETRSKNKSTTS 533
>gi|269123900|ref|YP_003306477.1| hypothetical protein Smon_1143 [Streptobacillus moniliformis DSM
12112]
gi|268315226|gb|ACZ01600.1| protein of unknown function DUF6 transmembrane [Streptobacillus
moniliformis DSM 12112]
Length = 293
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 96/290 (33%), Gaps = 11/290 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G + F A LWG++ +++ +V R+ + + VY G
Sbjct: 2 KKLGIIMAFIAAFLWGVSGSLAEYIFSNSNFNVNTYTFLRMFLTGIILVGYGVYTKGTKG 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L K ++V+ +A+ F + + ++TP I + S
Sbjct: 62 LNKILFSKKYLKKIIVYGIFGIALLQYSFAQTINNSNAAFATLMQYITPTIVLVYLSYVT 121
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLS-------LAIAVTWSAYCFARKTIPVGS 192
K + + I + + + +M + L+ + ++ +
Sbjct: 122 KTLPSIKKSILVSVALYGMFLMITSGSLNNLNVSPISLIYGLIAAFTFAFYILYISKFKK 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + C + I +L ++ + +S +I T + K
Sbjct: 182 IDNTIVIGCGMIIGSLIFIPFIDYSNFRELLKLDIFITFLSNVVLGNAIPFYLFL-ESTK 240
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+T ++ P++ I+ + L + ++ I +++ ++ + +
Sbjct: 241 YIHPATTSLLGAVEPIVAIIIGIIFLGTHLTLIQLIGAILLIGSITIISI 290
>gi|189022676|ref|YP_001932417.1| Transporter, DME family [Brucella abortus S19]
gi|237816974|ref|ZP_04595966.1| Transporter, DME family [Brucella abortus str. 2308 A]
gi|254698703|ref|ZP_05160531.1| Transporter, DME family protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254732149|ref|ZP_05190727.1| Transporter, DME family protein [Brucella abortus bv. 4 str. 292]
gi|256256106|ref|ZP_05461642.1| Transporter, DME family protein [Brucella abortus bv. 9 str. C68]
gi|260544661|ref|ZP_05820482.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260756509|ref|ZP_05868857.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759941|ref|ZP_05872289.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260763179|ref|ZP_05875511.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260882329|ref|ZP_05893943.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|297249463|ref|ZP_06933164.1| DME family transporter [Brucella abortus bv. 5 str. B3196]
gi|189021250|gb|ACD73971.1| Transporter, DME family [Brucella abortus S19]
gi|237787787|gb|EEP62003.1| Transporter, DME family [Brucella abortus str. 2308 A]
gi|260097932|gb|EEW81806.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260670259|gb|EEX57199.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673600|gb|EEX60421.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676617|gb|EEX63438.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260871857|gb|EEX78926.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|297173332|gb|EFH32696.1| DME family transporter [Brucella abortus bv. 5 str. B3196]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 90/287 (31%), Gaps = 10/287 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S + + + I G +P++ + L +V L R+ ++ +
Sbjct: 12 SSQQRWAMIALITSGIAIGSSPIFVR-LSEVGPLATGFWRLALAVLPLLLMDGRERHERK 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +A G + +L + + + P+ +
Sbjct: 71 DAAPLTLADCLRLALP--GFFIAADLGAWHLSLHSTSVANATLLANMAPIFVTIGAWLLF 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ R++ I+ ++ + ++++ G L +A + A
Sbjct: 129 RSRVSSSFIVGLVVAVAGVIVLKGGPGELLHSRSSGDAMALLAAVFYAGYILSVGRLRSR 188
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + AI A+F + F G + L ++ + +Y +
Sbjct: 189 FSTMRIMLWSSAIAAIFSLPVAYFMEGHILPATLYGWLVLAGLAWLTHAAGQSMIAYALA 248
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + P++ + IL +PI ++ I IV+ +++
Sbjct: 249 FLPASFSSLTLLLQPVVAAFLAWTILSEPIGLMQAIGGVIVISGILI 295
>gi|14520885|ref|NP_126360.1| hypothetical protein PAB0461 [Pyrococcus abyssi GE5]
gi|5458102|emb|CAB49591.1| Predicted permease [Pyrococcus abyssi GE5]
Length = 278
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/275 (10%), Positives = 79/275 (28%), Gaps = 8/275 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
++ + +LW + L ++ + ++ + L S A + +
Sbjct: 5 IYAILSILLWSTVASAFKLTLSRLDPISLLFYSSLTSSLIFLVANLVRGNPDWKSISKNR 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+G + L + A + P++ V L S FL +RL
Sbjct: 65 ESAILGFVNPLFYYLVL-----FTAYSRLPAQEAQALNYTWPILLVVLSSYFLGQRLTLK 119
Query: 147 QIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
+I ++ + +LI+ S + + + + V
Sbjct: 120 EIGGVIVGFIGILIVGTRGNLSSLRFSDPVGDGLAISSALLFAVYWVMNVNDKRPPEVKM 179
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ + + + ++ ++ K V M Y
Sbjct: 180 FWNFAFGTLYLLPNIPRIKFDLLGLLGAIYIGLFEMGVTYLLWLKALETDKAGKVASMVY 239
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+L + ++ + I + ++++ + +
Sbjct: 240 LTPVLSLFFISTVVGEKIMLSTLVGLSLILLGIFI 274
Score = 35.7 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 33/101 (32%)
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
+ G + + I + F + + R + YT P+L
Sbjct: 44 IFLVANLVRGNPDWKSISKNRESAILGFVNPLFYYLVLFTAYSRLPAQEAQALNYTWPIL 103
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++V S + L Q + + I +++ ++S +
Sbjct: 104 LVVLSSYFLGQRLTLKEIGGVIVGFIGILIVGTRGNLSSLR 144
>gi|222110454|ref|YP_002552718.1| hypothetical protein Dtpsy_1251 [Acidovorax ebreus TPSY]
gi|221729898|gb|ACM32718.1| protein of unknown function DUF6 transmembrane [Acidovorax ebreus
TPSY]
Length = 294
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 81/287 (28%), Gaps = 7/287 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ +W I + T+ L+Q EV R + L + + G
Sbjct: 11 RAVWLMVAVTFMWSIAGVVTRHLDQARSFEVTFWRSFFMLLSLCVILPVLQG----RALL 66
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + S +V + F+ A+L + + P+++ L VF+ +
Sbjct: 67 ANLRRGGRAVWISGVCWSVMFTAFMIAILLIPVASVLVTMAIGPLLTALLARVFIGHHIA 126
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI---PVGSSEGFFIEMC 201
A L + M L + + V A +G +++
Sbjct: 127 PRTWCAIALAGAGIGWMYGSGISGLSVVGVLVALCVPVAAAVNWVVVQHSQRQGHAVDLV 186
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ F +L + + + + Y + K + +
Sbjct: 187 PAVLLGAALSALATLPLAWPFQATARDLSLLALLGLVQLAIPCVLVVYCARVLKAPEIAL 246
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + I+ + + + +V+ A+V L
Sbjct: 247 LGLLEVIFGILLAWVGAGERPAPAVLMGGALVIGALVFNELLGWKEQ 293
>gi|254421282|ref|ZP_05035000.1| Integral membrane protein DUF6 [Synechococcus sp. PCC 7335]
gi|196188771|gb|EDX83735.1| Integral membrane protein DUF6 [Synechococcus sp. PCC 7335]
Length = 308
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/287 (11%), Positives = 88/287 (30%), Gaps = 12/287 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ A + WG+T + + L + LEV+S RVL + V++ LS ++
Sbjct: 9 FVLGCVAALTWGLTGTFIKLLPGFTTLEVLSIRVLSAFVSTLVVFVFYPSLLSTAIQLIR 68
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
P + + F A + + S + +I LG ++ + +
Sbjct: 69 RPTGLLLSSLMVFYYLFAVRAFQLAPVGDVTLVVGLSPILGLIIKAVLGKGIVRTEIVGV 128
Query: 147 QIIAALLIIL------------SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
I L++ S+ + L + +++ ++ +
Sbjct: 129 SISFIGLLLFIYPKVTGLGEEQSIYLTGLFFALLAACVSLGYAALFKHYSSLNKSIDPVA 188
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ ++ V + + + L + + +SY K
Sbjct: 189 VSCATFAIGSMIIAPITVASSHLFLLEVVSDSRVAAISLGLGIIATAVPTFCYSYAAKYL 248
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P+ + +L++ I + ++ + + +
Sbjct: 249 SPILTTALNLVTPVSAAAIAFILLQETIPLLSIFGAVLIFVGIFLLS 295
>gi|194292265|ref|YP_002008172.1| hypothetical protein RALTA_B1521 [Cupriavidus taiwanensis LMG
19424]
gi|193226169|emb|CAQ72116.1| putative inner membrane protein, DUF6 [Cupriavidus taiwanensis LMG
19424]
Length = 291
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 83/288 (28%), Gaps = 3/288 (1%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + Y++WG T L +F LE L ++ R L + + + + + +
Sbjct: 6 LLCLLITYVVWGTTYLAIRFTLESFPPLFMMGTRFLCAGLLLGAWLAWRGTPMPSARQLR 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
L+ L I + T + + + + +
Sbjct: 66 HCAVPALFLLVGGMGLTAIAEQTISSGATTVMIGSMPIFALIWGACFGNRPKWFEYVAIA 125
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ L++ G+ L LA+A AR+ + F EM +
Sbjct: 126 IGSAGILVLTAGEEFQVSAGGVVALLLAVASWSFGSQLARRLDLPPGAAAFAAEMVIGGA 185
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + + ++ + F + Y + + Y
Sbjct: 186 VLMALSLLR--QEPWPSAVSAQAGWAWVYLVVAGSLVAFSAYMYLVSTVSQTLAASYVYV 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
P + + ++ + I +++ A+ V L T+ +
Sbjct: 244 NPPVALAMGAWLGGEQIAPQTLGAVVLILAALTVLSLGTLRAARAQAA 291
>gi|104780822|ref|YP_607320.1| hypothetical protein PSEEN1663 [Pseudomonas entomophila L48]
gi|95109809|emb|CAK14514.1| conserved hypothetical protein; putative membrane protein
[Pseudomonas entomophila L48]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 92/286 (32%), Gaps = 11/286 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G L + A ++ G + + VLEV+ R ++ +
Sbjct: 1 MDNSLRRGALEMVAAMLISGTIGWFV-LVSGQPVLEVVFWRCVFGAGTLLLICAAMG--- 56
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
LK + + V S + +W + + + Y V P + V L ++F
Sbjct: 57 -FLKPGVLTRATFLLAVASGVAIVGNWVLLFASYSRASIAIGTAVYNVQPFLLVGLAALF 115
Query: 139 LKERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L E++ ++ + L +L + SG L +A+ +A + +
Sbjct: 116 LGEKITLPKLTWLSVAFLGMLAIVSAHGAGQGSGGEYLQGIALALGAAFLYAVAALIIKR 175
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + L + ++ + + + ++ + I+
Sbjct: 176 LTGTPPHLIALVQVSTGVLLLAPWVKLGGLPGELPALGSLVTLGIVHTGLMYVLLYSAIQ 235
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
R + G + + P+ I+ + ++ + ++++A
Sbjct: 236 RLPTALTGALSFIYPIAAILVDWVAFGHRLAPLQWLGVALILLAAA 281
>gi|327403550|ref|YP_004344388.1| hypothetical protein Fluta_1558 [Fluviicola taffensis DSM 16823]
gi|327319058|gb|AEA43550.1| protein of unknown function DUF6 transmembrane [Fluviicola
taffensis DSM 16823]
Length = 301
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 88/293 (30%), Gaps = 5/293 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + +WG T + + + + ++ HR+L + + + + +
Sbjct: 9 LLMHLIIFMWGFTGILGKLI-HIEAQYLVWHRILIAFISLLIGLYLLKMPMRIHNRKAML 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQG--FLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ + + + + + + +++
Sbjct: 68 KVFGTGIIVALHWITFYTSIKLSTASLGILCLSTATLHVTWIEPLVFKKKFSWVEFLFGS 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
L I + + L A+ + + A+ V SS EM + +
Sbjct: 128 LVIFGIYFVSSDFDEKQYFALALGLISALCAGFFSVFNAKLAEEVPSSAITLHEMGIGLV 187
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+++NG F + + SF F +KR TV +
Sbjct: 188 FLSGMLLYNGKLDSNLFKMSGSDFAWLIFLGVCCTSFAFIATIEVMKRLGAFTVSLSINL 247
Query: 266 APLLMIVSSVFILKQP--IDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P+ I+ ++ IL + ++ ++++ ++ + + K +
Sbjct: 248 EPVYTILLAIPILHEDELLNGNFYAGSAMIILVVIANAIYKSKMRERELKKTN 300
>gi|325267537|ref|ZP_08134189.1| drug/metabolite transporter family membrane protein [Kingella
denitrificans ATCC 33394]
gi|324980887|gb|EGC16547.1| drug/metabolite transporter family membrane protein [Kingella
denitrificans ATCC 33394]
Length = 286
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 77/278 (27%), Gaps = 16/278 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ++WG T L T FL RVL + +
Sbjct: 8 ILTTALAPLIWGSTYLVTTEFLPPDRPFTAALIRVLPAGLLLLA----------WTWRIP 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + +++ + A G L + ++ + + K
Sbjct: 58 KRDEWATVVLLGFLNIGFFQAMLFVAAYRLPGGLAAVLSSTQTLMVLVFTWLIGKTMPPK 117
Query: 146 LQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ +L + ++ L G +L+ A S
Sbjct: 118 AAWAWSAAGVLGIALLVLSPQARYDGTGILAALAGAAAMALGVYLSKHRRTSLPVLAFTG 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L I LF + + L +L + +F GI + + V
Sbjct: 178 WQLFIGGLFLLPVALLAEPRLESLSPANIGGYLYLSLFGAVLAYVLFFRGIAKLSPAAVS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ +P+ + L Q +D F +V++++
Sbjct: 238 SLGLLSPVSAFILGWLFLGQGMDAKSLAGFALVLVSIF 275
>gi|169344078|ref|ZP_02865064.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
gi|169297813|gb|EDS79910.1| putative membrane protein [Clostridium perfringens C str. JGS1495]
Length = 310
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 81/279 (29%), Gaps = 8/279 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYF-SGG 77
G V A + WGI + ++ L +S + + R S F I+
Sbjct: 2 NNKQKGISLVLIATVFWGIMGISSRILYEAGLSTMFIAFSRSFLSSICFFIWIMITDRKI 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + L G+ F+ + + + + + S +VT +F G
Sbjct: 62 LKIDPRGLAISALYGIGTFALCFIGYNLSVEYIPISVATVLMFTNSIWVTIFGVLFFGEK 121
Query: 138 FLKER-----LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F ++ L + I + L M+ L + +
Sbjct: 122 FNMKKGSVILLTLVGCIMVSNMSLGHFNMSAIGIAAGLGTGFLFAFQIIFPKFFSDYRKD 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + LF F+ + + L L + +
Sbjct: 182 TLLIYGYIFASIFIGLFTDFKESFNVIANAPNIGMVILNILSIGILSTFISNTFYIKSTE 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ S I+ P+L + + FI + ++ + +
Sbjct: 242 YIEASVTSILASMEPVLSSIFAFFIFGEVLNGKQIVGAI 280
>gi|183220227|ref|YP_001838223.1| DMT superfamily permease [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910345|ref|YP_001961900.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775021|gb|ABZ93322.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778649|gb|ABZ96947.1| Putative permease, DMT superfamily; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 295
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 90/291 (30%), Gaps = 8/291 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE---QVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G +VF + + + + + +S + + S
Sbjct: 4 NEKKGYFYVFLTGVFFAFEVIGFKEVFRRFHLSPEMAAFF--GVGFAFLVVTPFFLSSAK 61
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
K L + +L+ A+ + YAL + T + +V LG VF
Sbjct: 62 RRTKVILTIRRDGLILLIGTLSNAMGIVLYYYALKQTDLGPAAILIKTTVLYNVILGVVF 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ER ++ +L I + +++ G L A + SA+ FA ++ + +
Sbjct: 122 LGERFKDREVFGIILSIFGIYLISTLQGQINLISASCILISAFLFAIQSYLIKKYIPEIL 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC---IFSYGIKRAK 255
+ + V+ +I F +
Sbjct: 182 GLEFAYLRLFLLCVFFLLYALGIGSFAIPEWQTIVILGFCSLLGYFLGRAFYFEAHNYLP 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+S + P+ ++ + +K+P+D + I+++ + + +
Sbjct: 242 ISKLNATLLIEPIFLMFVGILFMKEPVDLQKLGGGAIILLGLYLIVFHKRK 292
>gi|146318017|ref|YP_001197729.1| DMT family permease [Streptococcus suis 05ZYH33]
gi|145688823|gb|ABP89329.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Streptococcus suis 05ZYH33]
gi|292557792|gb|ADE30793.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Streptococcus suis GZ1]
Length = 303
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 99/278 (35%), Gaps = 10/278 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+GTL A I WG++ + Q+L VSV + S R+L S + +
Sbjct: 4 EKRLGTLITVIAGIAWGLSGVSGQYLMSRGVSVDMITSLRLLVSGLFLVGLAYATAKEQL 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L KN +G+ +F+ L ++ ++ A+ + ++ P++ + +
Sbjct: 64 LAVLKDKN-ALLGIFIFAMLGLVLNQTAYLQAIYHTNAGTATVLQYLCPILVLAYTCLKN 122
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGS 192
+E+ + +++I+ +L I ++ H L I ++ + +
Sbjct: 123 REKPSGIELISIILAIAGTFLIATHGKLDELAVTPIGLFWGIFSAFTYALYIILPGKLIR 182
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + + + F V + + L G+ F + F G+
Sbjct: 183 QYGSITVIGLGMLMGGFVVTLGLQTWQHRLPIDGGSFLGLLGIVGVGTIFAYTAFLKGVS 242
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
++ P+ + +V+++ + + +
Sbjct: 243 MVGPVNGSLLASIEPIASVFFAVWLVNEQFYAIDFVGM 280
>gi|38704214|ref|NP_312899.2| hypothetical protein ECs4872 [Escherichia coli O157:H7 str. Sakai]
gi|168748750|ref|ZP_02773772.1| putative transporter [Escherichia coli O157:H7 str. EC4113]
gi|168755638|ref|ZP_02780645.1| putative transporter [Escherichia coli O157:H7 str. EC4401]
gi|168761664|ref|ZP_02786671.1| putative transporter [Escherichia coli O157:H7 str. EC4501]
gi|168768256|ref|ZP_02793263.1| putative transporter [Escherichia coli O157:H7 str. EC4486]
gi|168775212|ref|ZP_02800219.1| putative transporter [Escherichia coli O157:H7 str. EC4196]
gi|168780871|ref|ZP_02805878.1| putative transporter [Escherichia coli O157:H7 str. EC4076]
gi|168786810|ref|ZP_02811817.1| putative transporter [Escherichia coli O157:H7 str. EC869]
gi|168799467|ref|ZP_02824474.1| putative transporter [Escherichia coli O157:H7 str. EC508]
gi|195937594|ref|ZP_03082976.1| permease [Escherichia coli O157:H7 str. EC4024]
gi|208808303|ref|ZP_03250640.1| putative transporter [Escherichia coli O157:H7 str. EC4206]
gi|208813977|ref|ZP_03255306.1| putative transporter [Escherichia coli O157:H7 str. EC4045]
gi|208821359|ref|ZP_03261679.1| putative transporter [Escherichia coli O157:H7 str. EC4042]
gi|209396472|ref|YP_002273466.1| putative transporter [Escherichia coli O157:H7 str. EC4115]
gi|217325134|ref|ZP_03441218.1| putative transporter [Escherichia coli O157:H7 str. TW14588]
gi|254795949|ref|YP_003080786.1| putative permease [Escherichia coli O157:H7 str. TW14359]
gi|261226432|ref|ZP_05940713.1| permease [Escherichia coli O157:H7 str. FRIK2000]
gi|261256832|ref|ZP_05949365.1| permease [Escherichia coli O157:H7 str. FRIK966]
gi|293417452|ref|ZP_06660076.1| inner membrane transporter yiJE [Escherichia coli B185]
gi|187769161|gb|EDU33005.1| putative transporter [Escherichia coli O157:H7 str. EC4196]
gi|188016790|gb|EDU54912.1| putative transporter [Escherichia coli O157:H7 str. EC4113]
gi|189001582|gb|EDU70568.1| putative transporter [Escherichia coli O157:H7 str. EC4076]
gi|189357129|gb|EDU75548.1| putative transporter [Escherichia coli O157:H7 str. EC4401]
gi|189362714|gb|EDU81133.1| putative transporter [Escherichia coli O157:H7 str. EC4486]
gi|189367876|gb|EDU86292.1| putative transporter [Escherichia coli O157:H7 str. EC4501]
gi|189373315|gb|EDU91731.1| putative transporter [Escherichia coli O157:H7 str. EC869]
gi|189378116|gb|EDU96532.1| putative transporter [Escherichia coli O157:H7 str. EC508]
gi|208728104|gb|EDZ77705.1| putative transporter [Escherichia coli O157:H7 str. EC4206]
gi|208735254|gb|EDZ83941.1| putative transporter [Escherichia coli O157:H7 str. EC4045]
gi|208741482|gb|EDZ89164.1| putative transporter [Escherichia coli O157:H7 str. EC4042]
gi|209157872|gb|ACI35305.1| putative transporter [Escherichia coli O157:H7 str. EC4115]
gi|217321355|gb|EEC29779.1| putative transporter [Escherichia coli O157:H7 str. TW14588]
gi|254595349|gb|ACT74710.1| predicted permease [Escherichia coli O157:H7 str. TW14359]
gi|291430972|gb|EFF03968.1| inner membrane transporter yiJE [Escherichia coli B185]
gi|320190954|gb|EFW65604.1| hypothetical protein ECoD_02373 [Escherichia coli O157:H7 str.
EC1212]
gi|320639118|gb|EFX08754.1| hypothetical protein ECO5101_23899 [Escherichia coli O157:H7 str.
G5101]
gi|320644510|gb|EFX13571.1| hypothetical protein ECO9389_17121 [Escherichia coli O157:H- str.
493-89]
gi|320649834|gb|EFX18349.1| hypothetical protein ECO2687_15665 [Escherichia coli O157:H- str. H
2687]
gi|320655184|gb|EFX23133.1| hypothetical protein ECO7815_00202 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660808|gb|EFX28258.1| hypothetical protein ECO5905_18860 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665926|gb|EFX32952.1| hypothetical protein ECOSU61_23420 [Escherichia coli O157:H7 str.
LSU-61]
gi|326338039|gb|EGD61869.1| hypothetical protein ECoA_05131 [Escherichia coli O157:H7 str.
1044]
gi|326342666|gb|EGD66439.1| hypothetical protein ECF_02838 [Escherichia coli O157:H7 str. 1125]
Length = 301
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V +VFL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAAVFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|86133724|ref|ZP_01052306.1| triose-phosphate transporter family protein [Polaribacter sp.
MED152]
gi|85820587|gb|EAQ41734.1| triose-phosphate transporter family protein [Polaribacter sp.
MED152]
Length = 304
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 103/305 (33%), Gaps = 15/305 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L + +WG T + + + + ++ R+ ++ + +
Sbjct: 1 MQENKLKNYLLLHFIVFIWGFTAILGALIT-IDAIPLVFFRMGLAVLFIALYFLIKKKSF 59
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ V + + I+A HW FF A+ + + + + VF
Sbjct: 60 ------YLDKTGVFKFLITGVIIATHWIFFFKAIKVSNVSVALVTMSTGAFFTSLIEPVF 113
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIA------VTWSAYCFARKTIPVGS 192
K R+ L++I L +I+ L I+ L + A + A
Sbjct: 114 FKRRIKSLELILGLFVIVGLYIIFNFESQYQLGIIYALISSFLGSLFAVLNGLFVKKYDE 173
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ + Y+V NG E F L + + + ++ F +K
Sbjct: 174 NRISLYQLLFGTLFVFIYLVINGQITLEFFVLQKMDWFYLFVLSSICTAYAFIASVKVMK 233
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILK--QPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
TV + P+ I+ ++FI + ++ + IV+ ++ + + K
Sbjct: 234 YISPYTVMLTINLEPIYAIILALFIFGDKEKMNPEFYLGAAIVLGVVLANGVIKNQATLK 293
Query: 311 NKTKK 315
K K+
Sbjct: 294 QKLKR 298
>gi|325291709|ref|YP_004277573.1| regulator protein pecM [Agrobacterium sp. H13-3]
gi|325059562|gb|ADY63253.1| regulator protein pecM [Agrobacterium sp. H13-3]
Length = 288
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 87/286 (30%), Gaps = 17/286 (5%)
Query: 27 TLFVFCAYILWGIT-PLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A +WG T + T+FL V R L + + + +
Sbjct: 11 VLVTALAPAIWGTTYFVTTEFLPHGYPFHVAMLRALPAGILLLLLV----------RKLP 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L+ A + W + G + + + P+I + L +FL +
Sbjct: 61 EGIWWPRSLILGALNFSFFWAMLFVSAYRLPGGVAATVGAIQPLIVIGLSRLFLAAPVRP 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIE 199
L I+A LL IL + ++ L G L A+
Sbjct: 121 LAIVAGLLGILGVALLVLAPGAAALDAVGVAAGLAGAVSMAFGTVLTRKWRPPVSNLTFT 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L + + F + + + ++ G+ R + S
Sbjct: 181 AWQLTAGGILLLPVAYFLEPALPAPTAANILGMAYLGIIGAALTYFLWFRGLSRIEPSAA 240
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ + +P++ + L Q + + + F V+ ++ + +
Sbjct: 241 ASLGFLSPVVATLLGWLALGQSLTPAQIVGFVAVLFSIWLSQRSQL 286
>gi|262278563|ref|ZP_06056348.1| transporter DMT superfamily protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258914|gb|EEY77647.1| transporter DMT superfamily protein [Acinetobacter calcoaceticus
RUH2202]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/296 (18%), Positives = 114/296 (38%), Gaps = 5/296 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
T +G IL+ + YT L + E+ R+L + P + I+
Sbjct: 3 TQSNTALGITLNVIGSILFALMFAYTSLLHSLQGNEMYGWRILLTFPCLTLFIILKGNWQ 62
Query: 79 SLLKDTLK---NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + +FSA ++ + F++A G S YF+ P+I V +G
Sbjct: 63 QVRDIYTRIFLDRFFFLTRIFSAFLIGLQLWLFMWAPTNGYGLDVSLGYFLMPIIMVIVG 122
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ KER++ LQ I+ + IL ++ M + S + F + + G
Sbjct: 123 RIAFKERMSRLQKISCIFAILGIINMLVISKTLTWPTLLICLGYPIYFWLRQKTNTNHIG 182
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ ++ + + G + + N + G GL+++ S
Sbjct: 183 -GLWFDMILSLPISLFFIFNGNIGSNELISNPDILWLISGLGLISALALGFQSLSAPHLN 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
L+ G++ Y P+L++ S+ L + I T + + +A+ ++ V + KN
Sbjct: 242 LTLFGLLVYVEPILLLAVSIL-LGETIKTDEWPTYIAIWLAVCTLIIEGVNSIKKN 296
>gi|262041806|ref|ZP_06014991.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040798|gb|EEW41884.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 298
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 88/282 (31%), Gaps = 11/282 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A I+ G + L + V +V+ R L + IV S
Sbjct: 1 MQLTRGVWQMSLAMIISGSIGAFV-LLSGLPVTDVVFWRCLIGALTLLVFIVLSRQPFSR 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + + V L V+W A + + Y P + V +G V +
Sbjct: 60 L-----TRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGE 114
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW----SAYCFARKTIPVGSSEGF 196
++ ++ LL ++I+ +P + A F T +
Sbjct: 115 R-VSAVKWGWLLLAFGGVVILLSSELMPAHEEGLTTGVLLALGAAFFYALTAIIARKLHP 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ I L VV + P LI + ++ + I++
Sbjct: 174 LPAQHIAFIQVLVGVVMLLPLVHAPELTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPT 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G + + PL+ +V + + V+ +++ A
Sbjct: 234 PVTGSLSFIYPLVAMVVDYLVFHHALSAVQLPGGMLILFAAA 275
>gi|238757273|ref|ZP_04618460.1| Uncharacterized inner membrane transporter yedA [Yersinia aldovae
ATCC 35236]
gi|238704651|gb|EEP97181.1| Uncharacterized inner membrane transporter yedA [Yersinia aldovae
ATCC 35236]
Length = 300
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 95/299 (31%), Gaps = 4/299 (1%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
L + + ++ ++G+LF Y +WG T L + +E L + R L + +F +
Sbjct: 2 LKQNSRNMWLLVGSLFTL--YFVWGSTYLVIRIGVESWPPLMMAGLRYLIAGILLFSFLT 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L L+ + +L+ L V + + + T S+
Sbjct: 60 IRGHTLPTLRQWMGASAIGILLLAIGNGL-VTIAEHQHVPSGIAAVMVATVPLFTLCFSL 118
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
G K + + +I+L+ L + + + + +A A+ +
Sbjct: 119 LWGMRNTKLEWAGIALGLVGIILLNTGSNLLGNPMGAMLILLASASWAFGSVWSSKLSLP 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ +L + + L + + + +K
Sbjct: 179 NGPMSGAAQMLVAGVILLIGSTLSGEELSQMPSMSGILSLLYLIVFGSMLAISAYMFLLK 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ + Y P++ ++ + + + T I+V A+V+ L + +
Sbjct: 239 NVRPAVATSYAYVNPIVAVLLGISFAGESLSTTEWCALAIIVSAVVLVTLGKFLFKRRE 297
>gi|225390217|ref|ZP_03759941.1| hypothetical protein CLOSTASPAR_03967 [Clostridium asparagiforme
DSM 15981]
gi|225043728|gb|EEG53974.1| hypothetical protein CLOSTASPAR_03967 [Clostridium asparagiforme
DSM 15981]
Length = 292
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 95/277 (34%), Gaps = 12/277 (4%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + ++G ++ + + + E+ R + + + + + K
Sbjct: 12 IVFSMAVFGTISIFVRNI-PLPSAELALCRAVIAAATLLIWQILTRTMVRFQDI----KK 66
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +L+ S + V+W F A L + SY+ PV+ + +ERL Q+
Sbjct: 67 ELPLLLLSGAAMGVNWILFFQAYKYTSVALATLSYYFAPVLVTVASPLLFQERLTGRQMF 126
Query: 150 AALLIILSLLIMTLHSGIPLLS------LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ L L+++ SG + + + G
Sbjct: 127 CFVMSTLGLVLVIGVSGGAGAGDTAGVLFGLGAAVFYAAVVLCNKGIRNVTGINRTYLQF 186
Query: 204 AIPALFYVVWNGFSGGEH-FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + F+GG H L L+ + ++ ++ K I+
Sbjct: 187 LASIAVLLPYVLFTGGFHLAELPAKGLASLLVVGVGYTGIAYTLYFSSLRYLKGQEAAIL 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y PL+ ++ SV +L + + ++ +++ ++
Sbjct: 247 SYIDPLVAVLVSVTVLAESVTWLQAAGGAMILGFTIL 283
>gi|170695933|ref|ZP_02887072.1| protein of unknown function DUF6 transmembrane [Burkholderia
graminis C4D1M]
gi|170139117|gb|EDT07306.1| protein of unknown function DUF6 transmembrane [Burkholderia
graminis C4D1M]
Length = 309
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 84/276 (30%), Gaps = 3/276 (1%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y++WG T L L L + R L++ G+F + +
Sbjct: 33 YLVWGSTYLAVHVALGSFPPLLMSGLRNLFAGVGLFAFAARRNPVWPSAAEIRNAGLVGT 92
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
MLV ++ + + + + + VI+ G + + +
Sbjct: 93 MLVGLSSGMLAYGMRTVG--TGTAAVMVATVPLFATVIAAVAGRKIGRGEWFAVGLGLVG 150
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ ILS T S L++ + A S+ F + + +
Sbjct: 151 IAILSHGDDTPGSAGGSLAILCGALFWAGGAHLAGRLKLPSDLFLSTSLQIGLGGAMSTM 210
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
SG + +P F+ + + + + I+ Y P++ +
Sbjct: 211 VAWVSGERMLEVHFLPVLAFIYLMLIGTMAAYVAYGFLIRHTSPIIASSCMYVNPVVAVA 270
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+L +P+ I ++++++ +
Sbjct: 271 LGALLLGEPVTHSTVIATVVILLSVGLSFWLDYRKK 306
>gi|196035246|ref|ZP_03102652.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus W]
gi|195992310|gb|EDX56272.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus W]
Length = 295
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 88/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ LE + +I+ R + + + ++++ + +T+K
Sbjct: 9 LMLLLVTFFWGASILLTKVGLEGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFETVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASILFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFRIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVVQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 185 GLFSLIFSFIIETPKLPSTINSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ +
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILVSVLIAEVD 281
>gi|119486248|ref|ZP_01620307.1| hypothetical protein L8106_16379 [Lyngbya sp. PCC 8106]
gi|119456461|gb|EAW37591.1| hypothetical protein L8106_16379 [Lyngbya sp. PCC 8106]
Length = 325
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 94/286 (32%), Gaps = 13/286 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL----- 80
L + + +P++ + E +S I +R + + +
Sbjct: 20 ILSLVIGLVAISFSPIFIRLSEGEISPYSTIFNRFWIATVALGLWNGISATRPPKSLPLS 79
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ + + +G+L ++L+ + ++L ++ + +TP+ + G +FL+
Sbjct: 80 IEKPGNSIQTIGLLFLLGSLLSTSLMLWAWSLTQTSVANSAIIHSLTPIFTALWGWLFLR 139
Query: 141 ERLNHLQIIAALLIILSLLIMTL-------HSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+++ I+ + + L++ L+ ++ +
Sbjct: 140 RQIDRKFILGMAIAVGGTLVIGFDDLSHSQSGFQGDLAALLSASLLGGYPLIIEQLKTRI 199
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I + L + +G + F + + + + +KR
Sbjct: 200 SSNEIIKGCSIVGMLVALPLVVINGDQLFPHSLHGWFAVISLAVVCQIIGLGLEAISLKR 259
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+L +++ I ++ + I F V+I + V
Sbjct: 260 FSAEFISTCHLVTPILGSIAAWVIFEEVLTADNWIGFTCVLIGIYV 305
Score = 37.2 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 30/81 (37%)
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
+I L G L S ++++ + + ++ I+ P+ + L++ ID
Sbjct: 85 NSIQTIGLLFLLGSLLSTSLMLWAWSLTQTSVANSAIIHSLTPIFTALWGWLFLRRQIDR 144
Query: 285 VRTIVFGIVVIAMVVYLLPTV 305
+ I V +V +
Sbjct: 145 KFILGMAIAVGGTLVIGFDDL 165
>gi|191168934|ref|ZP_03030703.1| putative transporter [Escherichia coli B7A]
gi|193063917|ref|ZP_03045003.1| putative transporter [Escherichia coli E22]
gi|193067948|ref|ZP_03048913.1| putative transporter [Escherichia coli E110019]
gi|194429396|ref|ZP_03061920.1| putative transporter [Escherichia coli B171]
gi|218556505|ref|YP_002389419.1| putative permease [Escherichia coli IAI1]
gi|218697658|ref|YP_002405325.1| putative permease [Escherichia coli 55989]
gi|260846751|ref|YP_003224529.1| putative permease [Escherichia coli O103:H2 str. 12009]
gi|293472261|ref|ZP_06664671.1| inner membrane transporter yiJE [Escherichia coli B088]
gi|300819361|ref|ZP_07099559.1| integral membrane protein DUF6 [Escherichia coli MS 107-1]
gi|307314728|ref|ZP_07594325.1| protein of unknown function DUF6 transmembrane [Escherichia coli W]
gi|309797164|ref|ZP_07691561.1| integral membrane protein DUF6 [Escherichia coli MS 145-7]
gi|190901021|gb|EDV60801.1| putative transporter [Escherichia coli B7A]
gi|192929382|gb|EDV82990.1| putative transporter [Escherichia coli E22]
gi|192958568|gb|EDV89006.1| putative transporter [Escherichia coli E110019]
gi|194412543|gb|EDX28841.1| putative transporter [Escherichia coli B171]
gi|218354390|emb|CAV01165.1| putative permease [Escherichia coli 55989]
gi|218363274|emb|CAR00923.1| putative permease [Escherichia coli IAI1]
gi|257761898|dbj|BAI33395.1| predicted permease [Escherichia coli O103:H2 str. 12009]
gi|291321355|gb|EFE60795.1| inner membrane transporter yiJE [Escherichia coli B088]
gi|300528044|gb|EFK49106.1| integral membrane protein DUF6 [Escherichia coli MS 107-1]
gi|306905783|gb|EFN36309.1| protein of unknown function DUF6 transmembrane [Escherichia coli W]
gi|308119243|gb|EFO56505.1| integral membrane protein DUF6 [Escherichia coli MS 145-7]
gi|315063279|gb|ADT77606.1| predicted permease [Escherichia coli W]
gi|323161248|gb|EFZ47162.1| hypothetical protein ECE128010_2530 [Escherichia coli E128010]
gi|323943639|gb|EGB39746.1| integral membrane protein DUF6 [Escherichia coli H120]
gi|324115491|gb|EGC09432.1| integral membrane protein [Escherichia coli E1167]
Length = 301
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYTRHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|257452832|ref|ZP_05618131.1| hypothetical protein F3_07184 [Fusobacterium sp. 3_1_5R]
Length = 295
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 88/284 (30%), Gaps = 5/284 (1%)
Query: 28 LFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ F A W + T+ + Q+S +++ + R + + + F L +D
Sbjct: 13 FYAFLAVFFWASAFVSTKIVLQSGQLSAMDLGTLRYFLAAILLLPLAILFKVRLPDSRDL 72
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
K + + +A + + + T + +
Sbjct: 73 SKFAISGILGY-TAYMFFFNTASTMITPSTASVINAICPGVTAIFAYFLFYEKISWKGIL 131
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L I ++ LSL + I +L + A + + V L
Sbjct: 132 GLAISFTGILFLSLWNGSFSLNIGVLYMLAAALCLSMYNISQRSFVKRYNAMETMTYCLL 191
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST-VGIME 263
+LF ++ +G S L L + + ++ ++ +T V
Sbjct: 192 AGSLFLLLCHGKSLTLIPSLSKQMWIHLLYLAIFPSILSYYCWAKAMECCNKTTEVTNFM 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ P+L S ++K+ ++++ M+++ +
Sbjct: 252 FVTPMLATFLSFLMIKEFPTWSTYFGGALILLGMLLFQIEKTKK 295
>gi|229030113|ref|ZP_04186175.1| Transporter, Drug/metabolite exporter [Bacillus cereus AH1271]
gi|228731171|gb|EEL82091.1| Transporter, Drug/metabolite exporter [Bacillus cereus AH1271]
Length = 295
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 88/280 (31%), Gaps = 10/280 (3%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+F + ++ + L V +R+ ++ + +++ + LK +
Sbjct: 11 LFFGVFALSTSAIFVK-LADAPAAIVAFYRLFFAALILLPLLLFNKNNRNELKTVTRR-- 67
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
G S LA H+ + +L ++ + P+ S+ G KER +I
Sbjct: 68 QWGFGFISGLFLAAHYVLWFESLQYTSVASSTVIVTLQPLFSMIGGYFLFKERFTKGAVI 127
Query: 150 AALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L+ I +++ + IA F +
Sbjct: 128 GCLIAISGSIVIGWQDFQVSGEALYGDILAFIAAGIITAYFFISQHVRKDLSLIPYSVIS 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A F ++ F+ + IF++ +K + + +
Sbjct: 188 YGSSACFLGIFAYMQNEAFIHYSTQTWVCFIGLAFIATILGQTIFNWLLKWMSATVISMS 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + FIL + I + + ++ I + ++L+
Sbjct: 248 ILGETIGTCILAYFILNETISIQQGLGIAVIFIGLALFLV 287
>gi|186686459|ref|YP_001869655.1| hypothetical protein Npun_F6443 [Nostoc punctiforme PCC 73102]
gi|186468911|gb|ACC84712.1| protein of unknown function DUF6, transmembrane [Nostoc punctiforme
PCC 73102]
Length = 369
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 101/313 (32%), Gaps = 27/313 (8%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFA----------IV 72
+ G +++ A +++ + T+ L ++ I R SL V F ++
Sbjct: 31 RVSGQTYLWLATLIFAASGAVTRRLTEIGAEHFIGERNPISLCNVLFVGNLCALILLILI 90
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
Y L V + + A+ G AL + P +++
Sbjct: 91 YGRQWNKATLKQLSRTDWVSLTAVAILSGALAPGLIFQALSVTGVNNVILVGRLEPPLTL 150
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMT--------------LHSGIPLLSLAIAVTW 178
L L+ER+N + I A+ +++ GI L A+
Sbjct: 151 ALSVWLLRERVNIWEFIGAIAAFAGVILTIILQPPTEAMMNMGGFSLGIGELLAAVGSIA 210
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFF---LGNIPDTLFLIG 235
+ + + A+ + + G+ F L +
Sbjct: 211 ATASTIIGKKYLSQIPLGIYSIFRTALGTIIFFFIALVLYGKDHFADVLSPFLWQWMFLY 270
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
GL+ G+K + +ST ++ P++ I+++ IL + + I ++++
Sbjct: 271 GGLIVVLGQSFLIKGLKTSTVSTASLIGSFGPIVGILAAYLILGEAPTLPQYIGGSVILV 330
Query: 296 AMVVYLLPTVINS 308
+ + + +
Sbjct: 331 GIFLSQVGNWRKT 343
>gi|83646808|ref|YP_435243.1| DMT superfamily permease [Hahella chejuensis KCTC 2396]
gi|83634851|gb|ABC30818.1| predicted permease, DMT superfamily [Hahella chejuensis KCTC 2396]
Length = 307
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/282 (7%), Positives = 73/282 (25%), Gaps = 2/282 (0%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + G + ++ Q+S V +R+ + + ++ SLL
Sbjct: 15 LAMAALSAVFMGTIGVIAKY-AQLSAETVTFYRLFFGAAMMLGYLLVIRKA-SLLWCWPS 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + I+ ++ + + +FL + +
Sbjct: 73 WRVLINGGFLAGFIVFYIQAMEHTSMANAIMTIYLAPVVASVFAHLFLSEKLSASAMGLI 132
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
++ + L + A I + +
Sbjct: 133 LTALFGFAMMMEFRLEFGGSQDALGMTYAGLAMLCYAGFIIINRATPAHVHVYARSWYQM 192
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ + + + L + ++ +T G + Y
Sbjct: 193 LIGALCMAPLMLQQQQVIAPAQWGWLLAAGLIPGFLAILFAVIALRELPSATFGTLAYLE 252
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+ ++ + Q + ++ G+++ + + + T +
Sbjct: 253 PIAVVTFGWALFDQALSPLQIAGCGLIMCSGIAQAVLTQRRN 294
>gi|188492192|ref|ZP_02999462.1| putative transporter [Escherichia coli 53638]
gi|188487391|gb|EDU62494.1| putative transporter [Escherichia coli 53638]
Length = 301
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFNY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|329738251|gb|AEB97256.1| EamA [Azospirillum brasilense]
Length = 317
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 6/261 (2%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
+ EV + + + L ++ +A
Sbjct: 27 HGLDPFEVTFFAYI-----LPLLLSPVFMTKGDRVRDLLRWNRPWLMTVRLVFVAASTPL 81
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
+ + + F+ P + L V LKE + + +A + +LI+
Sbjct: 82 SVMSFRSLPFAEAFAMIFLMPSLVTLLSIVVLKEPVRWRRRLAIGAAFIGVLIVARPGFR 141
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
LL A A+ A I ++ L V +G F
Sbjct: 142 ELLPGHFAALGCAFSSAVVVITGRMIGHSEKRFTLIGTVFLSTAVASGLLMIPGFEWPTR 201
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+ +G+ +F+ A VG +Y+ L + + D +
Sbjct: 202 EQWILTVGFATTTFAAQALFTLAAAFAPADRVGAAQYSQILWALAIGAIFFDEWPDLLSL 261
Query: 288 IVFGIVVI-AMVVYLLPTVIN 307
+ IVV + ++ +
Sbjct: 262 VGIVIVVGSGLFIFAREHARH 282
>gi|300864854|ref|ZP_07109702.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300337147|emb|CBN54852.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 352
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/311 (13%), Positives = 96/311 (30%), Gaps = 28/311 (9%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSL----------PGVFFAIVYFSGG 77
++ A +++ I+ + L ++ +I+ R S + VY+
Sbjct: 20 AYLLTAIVIFAISGSVIRKLTEIGAQNLINGRNPISFCNVLFAGNICALLVLIFVYYRQW 79
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + V + A+ AL + P +++ L +
Sbjct: 80 NLPALKQLSRKNWLSLSVVAILEGALAPTLIFTALAVTMVNNVILIGRIEPPLTLILSVL 139
Query: 138 FLKERLNHLQIIAALLIILSLLIMTL------------------HSGIPLLSLAIAVTWS 179
L+ER+N + A+ + +++ L + A+ + S
Sbjct: 140 LLRERVNRWVVGGAIASFIGVILTILLQTPDDNIVKMGGAIHIGQGELMTAGWAVCIAIS 199
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
K + + I V+ + L ++
Sbjct: 200 TIISKAKLGQIPLGIFTVFRTFIGTIIFFAIVMVQYGPIHFIDIFSPLLWQWMLFYGIVI 259
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
F G+K++ S V + P+ I++S IL + + I +++ +++
Sbjct: 260 VVGGQLCFFTGLKKSTASEVSLASSFGPIAGILASYLILGELPSIAQYIGGTVIMAGIIL 319
Query: 300 YLLPTVINSGK 310
+ V S K
Sbjct: 320 TQIGVVRQSTK 330
>gi|206901018|ref|YP_002250564.1| permeases of the drug/metabolite transporter (DMT) superfamily
[Dictyoglomus thermophilum H-6-12]
gi|206740121|gb|ACI19179.1| permeases of the drug/metabolite transporter (DMT) superfamily
[Dictyoglomus thermophilum H-6-12]
Length = 290
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/293 (9%), Positives = 74/293 (25%), Gaps = 17/293 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L + +WG T +T+ +V + F +
Sbjct: 6 LKGLLILTLITFVWGSTFSFTKIALEVFTPFFLLFLRFLLGAFALFLFLILKRQR----- 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
V I F + L T+F ++ ++ F + K ++
Sbjct: 61 ----ISINFSGVILGIINFSAIAFQTFGLRYTTATKTAFITGLSVLLVPFFEKLVFKNKI 116
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAY--------CFARKTIPVGSSEG 195
+A + L+ +T + +
Sbjct: 117 YWNLWLAVFTGFIGLIFLTTDFSSISTINWGDFLVLVCAVLYAIQIVYISYVVERREIFD 176
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ F + +F + G K
Sbjct: 177 LAFSEILFTAIFSFLFFLIFEPRNLPLNFILKNSLSVIYLGIGATAFTLTLQLVGQKYVS 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ ++ P+ + + +L + ++ + I +++I++ + + + N
Sbjct: 237 PTKSALIYNLEPVFATLFAFLLLSEKLNFQQIIGASLILISLFISIPSSFQNK 289
>gi|218234486|ref|YP_002365719.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
B4264]
gi|218162443|gb|ACK62435.1| transporter, Drug/Metabolite Exporter family [Bacillus cereus
B4264]
Length = 295
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/273 (9%), Positives = 86/273 (31%), Gaps = 5/273 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ L+ + +I+ R + + + ++++ + T+K
Sbjct: 9 LMLLLVTFFWGASILLTKLGLDGIEEYNLIALRFIIA--FLLSGLIFYKHLFKVDFKTVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVVQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 185 GLFSLIFSFIMETPKLPSTINSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + + + + ++++++++
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILLSVLI 277
>gi|163733027|ref|ZP_02140471.1| hypothetical protein RLO149_10215 [Roseobacter litoralis Och 149]
gi|161393562|gb|EDQ17887.1| hypothetical protein RLO149_10215 [Roseobacter litoralis Och 149]
Length = 296
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 83/297 (27%), Gaps = 6/297 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
A T + A +L+ L + L + S +E+ + R ++ L AI
Sbjct: 2 PAKDKTALAIGLSLIALLLFDAMGLVIKLLSERYSAMELSAWRNIFGLIPAIIAIYLSPT 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + + ++ I+ F +L S + + L
Sbjct: 62 WRAAGQPVKIRQWKLALMR--GFIVTFAQMCFYLSLGLMAFATASTITYANALFMTALAV 119
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L E++ ++ A L+ ++++ A+ +A +A + +
Sbjct: 120 PLLGEKVGPVRWGAVLIGFAGVMLIMKPGTDAFTPYALLPLAAAALYALVGVTSRLFDDT 179
Query: 197 FIEMCVLAIPALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ A +V G + + D ++I G +
Sbjct: 180 VPSPLISLYSAATALVTSAIIALFWGGFTPIASWSDMGWIIAMGGFGGTAVLFLVSSYRM 239
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ S + Y + V + ++ ++ + +
Sbjct: 240 TEQSNLAPFSYFGIPMAFVLGWIFFDETPWNTLFPGALLIAAGGLMIIWRERQLRSR 296
>gi|153209013|ref|ZP_01947207.1| transporter, UAA family [Coxiella burnetii 'MSU Goat Q177']
gi|165920279|ref|ZP_02219551.1| transporter, UAA family [Coxiella burnetii RSA 334]
gi|212219129|ref|YP_002305916.1| transporter, drug/metabolite exporter family [Coxiella burnetii
CbuK_Q154]
gi|120575550|gb|EAX32174.1| transporter, UAA family [Coxiella burnetii 'MSU Goat Q177']
gi|165916835|gb|EDR35439.1| transporter, UAA family [Coxiella burnetii RSA 334]
gi|212013391|gb|ACJ20771.1| transporter, drug/metabolite exporter family [Coxiella burnetii
CbuK_Q154]
Length = 297
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 84/279 (30%), Gaps = 8/279 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+G L + A+++ + + + + ++ + + L + ++
Sbjct: 7 RNLRIGVLILIIAFLIGAVQNALIKSIRVNYPAIVIVFIQYAFCLLILLPSLFKHGFATM 66
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K +L+ + + ++ YAL T + P+ + ++
Sbjct: 67 KSKHVG-------LLMLRSMMGIGYFLGMFYALKTVPLVDVTLLANTGPLWVPLICLLWE 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
++ ++ ++ + ++ + + ++ S C +
Sbjct: 120 GVPISWRLYGGIIVGLIGVALVLMPNDRVFSVESLFALGSGLCLGFAMVAARRLSQTESA 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+L L + + + + LI +L + G R S +
Sbjct: 180 QRILIYYFLTATLATLPFAIMEWKAPTLFQWVILITNAILMLIQQQLIYLGCSRGPASQL 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I Y++ + ++ K+ I + +V+
Sbjct: 240 SITTYSSVIFSVILGWIFWKENITLLTIAGILLVIFGSY 278
>gi|170735123|ref|YP_001774237.1| hypothetical protein Bcenmc03_6627 [Burkholderia cenocepacia MC0-3]
gi|169821161|gb|ACA95742.1| protein of unknown function DUF6 transmembrane [Burkholderia
cenocepacia MC0-3]
Length = 299
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 88/298 (29%), Gaps = 13/298 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
S + ++ V + W + + L ++ L++ + R + V + +
Sbjct: 7 STSRGARQPLVAAAAVAFTIVSWASAFPFIRIGLHGLAPLQLAAARFATAAVLVIAWLAW 66
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L D + L +A++ T SF P+ +
Sbjct: 67 RRPSLPTKADAWR------FLACGLLGIALYNALLNTGEQTVSAGAASFIVNTLPIFTAL 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKT 187
L +VFL+ER N + +L+ + + ++ G + A SA F +
Sbjct: 121 LAAVFLRERFNRWGWLGSLVSLTGIAVIAQGQPGGLVLGSGSTLILGAALCSASYFVLQR 180
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ L A+ W + ++ + + +
Sbjct: 181 RLIPVYGALPCTAYTLLAGAVLLAPWLPGALVSLGGGSRDTALAVVVLGVFPAALGYATW 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ + + Y P + + SV + + + + ++V L
Sbjct: 241 TFALGYFGAARAASFLYLTPAVATLLSVVLTGERPGIATACGGLLAIAGVIVVALRGR 298
>gi|116628314|ref|YP_820933.1| DMT family permease [Streptococcus thermophilus LMD-9]
gi|116101591|gb|ABJ66737.1| permease of the drug/metabolite transporter (DMT) superfamily
[Streptococcus thermophilus LMD-9]
Length = 304
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 106/304 (34%), Gaps = 10/304 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G+L V A I WG + + Q+L V+V + S R++ + + ++ +F
Sbjct: 2 SKQLKGSLMVLVAGIAWGFSGVSGQYLMAHGVNVNLLTSLRLILAGILLTASV-FFRQSD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ V + +F+ L ++ ++ A+ + +VTPV+ +
Sbjct: 61 KLVSALKDKKTLVSIALFALFGLVLNQYAYLSAIQHTNAGTATVLQYVTPVLILTFVCAK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ +++A ++ I I+ H L + + +
Sbjct: 121 NRRFPMVSELVAIIMAIAGTFIIATHGQVTELAITPIGLFWGLFSAVTYALYILLPAKAI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G I + + + + L + F + IF G
Sbjct: 181 EKWGSLIVIGLGMLLGGLVFPIAIQAWKYKLPLTGGNLLALFGLVFIGTLFAYTIFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ ++ +V I+ + + ++V+A+++ L +++ K
Sbjct: 241 AMVGAVKGSLLASVEPVASVILTVLIMGDRFFAIDVVGMILIVLAVIIISLKNLVSLTKE 300
Query: 312 KTKK 315
K ++
Sbjct: 301 KIQR 304
>gi|169823811|ref|YP_001691422.1| putative drug/metabolite transporter [Finegoldia magna ATCC 29328]
gi|303234793|ref|ZP_07321419.1| putative membrane protein [Finegoldia magna BVS033A4]
gi|167830616|dbj|BAG07532.1| putative drug/metabolite transporter [Finegoldia magna ATCC 29328]
gi|302494134|gb|EFL53914.1| putative membrane protein [Finegoldia magna BVS033A4]
Length = 303
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 89/284 (31%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ILWG + + + +++ R ++L + +I+++ D LK
Sbjct: 12 LALLIVAILWGSSLTVVKQSSKTFNPNFILAIR--FTLAAILLSIIFWKRLRQAKFDDLK 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + L + + + + F VI FLG + K+R +
Sbjct: 70 SGLLI------GIFLFMAYSSQTLGVKFADPGRSGFLSASYCVIVPFLGWIVFKQRPDRY 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS-----------EG 195
+ AA L I + ++L + +A +
Sbjct: 124 NLSAAALCITGIFFISLSGSSAHVDNPLAWLGDLLALLSGLLFASHIIAVSALAKGRDPI 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L ++ H + + L + + + + G K
Sbjct: 184 VMTILQFIMAAVLSWITTIVIEDNSHIVVTSRSVMELLYLAVMCTAVALLLQNIGQKYTN 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
ST I+ + I+ V I + + I F + A++V
Sbjct: 244 PSTAAIILGFESIFGILIPVLIGIESLTVYSVIGFVFIFAAILV 287
>gi|42780107|ref|NP_977354.1| hypothetical protein BCE_1031 [Bacillus cereus ATCC 10987]
gi|42736025|gb|AAS39962.1| membrane protein, putative [Bacillus cereus ATCC 10987]
Length = 307
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/275 (9%), Positives = 86/275 (31%), Gaps = 5/275 (1%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ WG + L T+ LE + +I+ R + + + ++++ + T+K
Sbjct: 23 LLLVTFFWGASILLTKVGLEGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFKTVKYA 80
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ ++F I A + + + +S ++++ I
Sbjct: 81 FILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEQKVIVGII 138
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ + I L L G + ++ + A + + L L
Sbjct: 139 LTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVVQLGFVGL 198
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F ++++ + L + F + + + G++ P+
Sbjct: 199 FSLIFSFIIETPKLPSTINSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLEPV 258
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + + + ++++++++ +
Sbjct: 259 FSAGFAFVFTGETLTRKGYLGATLILVSVLIAEVD 293
>gi|146294062|ref|YP_001184486.1| hypothetical protein Sputcn32_2972 [Shewanella putrefaciens CN-32]
gi|145565752|gb|ABP76687.1| protein of unknown function DUF6, transmembrane [Shewanella
putrefaciens CN-32]
Length = 311
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 95/302 (31%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++ A LW + L S L+++ VL S+ + + +
Sbjct: 2 KSSNLAYVYGMAAVFLWSTVATAFKIALSYYSPLQLVFVAVLTSIIALTSILAWQKKLSL 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + L+ P + +++ A + V+ L + L
Sbjct: 62 LKQQFLRRPMFYLVT--GLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
K+ L I AAL+ + I+ I S +A+T + +
Sbjct: 120 KQHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGLALTSTLLWCLYWIVNTKDQ 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L ++ + F ++ +K
Sbjct: 180 GDPVVSLLLSFLIGLPFIAMTLVLTDALPSFSLKAIFAGMYVGLFEMGITFVLWLMALKT 239
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A + + + M + +P++ I +IL++ I + ++ M++ L K
Sbjct: 240 ATRTANISTMVFLSPVMSIGFIAWILQETIAMTTYLGLAFILSGMMLQQLLPRYTERKRS 299
Query: 313 TK 314
K
Sbjct: 300 GK 301
>gi|319955565|ref|YP_004166832.1| hypothetical protein Celal_4092 [Cellulophaga algicola DSM 14237]
gi|319424225|gb|ADV51334.1| protein of unknown function DUF6 transmembrane [Cellulophaga
algicola DSM 14237]
Length = 315
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 96/295 (32%), Gaps = 18/295 (6%)
Query: 19 ASLPTMMGTLFVFCA-YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
A + + F A Y++WG T L + + ++ + R + +F
Sbjct: 2 AKSSNTLLIILAFFAIYVIWGSTYLLNKIAVTELPAYMLAGIRFTTAGLLIFGICKVSGI 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + +N + L G F++ L + P+I + L
Sbjct: 62 SIKITLKQFRN-----SFIAGFLFLTFGNGVFVWGLKYVDSSFAALEVAAMPLIVLILMR 116
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFAR 185
V +++ + I+ +L ++ + ++ I + + + + ++
Sbjct: 117 VVDGKKIKPMSIVGVILGVIGIYLLVSQKQIVQQDESLLGMIIIFFCVLGWSTGSLFVSK 176
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFC 245
T+P +M I + G + + L + F
Sbjct: 177 ATLPQSYLVNTAYQMVTAGITLGITSLVLGENWSWPSTWSGPVQLSMGLLIILGSIVAFS 236
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
F+Y +K V Y P++ ++ ++L + I + + G+++ +
Sbjct: 237 AFNYLLKTVSPEKVATSSYVNPVIALLLGWYVLDENITSQSILAAGVLLTGVFFI 291
>gi|307730823|ref|YP_003908047.1| hypothetical protein BC1003_2803 [Burkholderia sp. CCGE1003]
gi|307585358|gb|ADN58756.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1003]
Length = 293
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 85/299 (28%), Gaps = 22/299 (7%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L I WG+ + + L V + + + R + F +
Sbjct: 6 LLLALVVVIAWGVNFVVIKVGLHGVPPMLLGALRFTLAALPAVFFV-----------RRP 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ P + L F + L S ++ ++FL ER
Sbjct: 55 QLPWRWLLAYGLTISLGQFAFLFSAMYVGMPAGLASLVLQAQAFFTLIFAALFLHERFRL 114
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
++ L+ L ++ + G + +T A C V G + ++
Sbjct: 115 PNVVGLLIAAAGLAVIGMQGGHAMTLAGFVLTLCAACSWALGNIVTKKVGKVDLVGLVVW 174
Query: 206 PALFYVVWNGFSGGEHFFL----------GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L V + + + + ++S + R
Sbjct: 175 GSLIPPVPFFALSYALEGPQRITAALSGISAMSIFAIVYLAFIATLLGYGLWSRLLSRYP 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S V P++ + S+ L + + + +V+ + V + + + T+
Sbjct: 235 ASQVAPFSLLVPIVGLASASIFLDERLSAAQIAGALLVMAGLAVNVFGGWLVQRLSPTR 293
>gi|253999274|ref|YP_003051337.1| hypothetical protein Msip34_1565 [Methylovorus sp. SIP3-4]
gi|313201363|ref|YP_004040021.1| hypothetical protein MPQ_1630 [Methylovorus sp. MP688]
gi|253985953|gb|ACT50810.1| protein of unknown function DUF6 transmembrane [Methylovorus sp.
SIP3-4]
gi|312440679|gb|ADQ84785.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 293
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 97/285 (34%), Gaps = 12/285 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+G+L++ A + I + + ++ S E++ +R + L ++ L+
Sbjct: 11 RLGSLWMLVAAFFFAIMGVLVKLGAQKFSSAELVFYRSFFGLVFIYGLTRIRKQSLA--- 67
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ ++ A + + F YA+ + +P+ L +L E+
Sbjct: 68 -----TPLLSKHMWRAVLGFISLLLFFYAISELPLATAITLNYTSPLFMAALAPFYLGEK 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+A L + + ++ S +A A+ + A + G E
Sbjct: 123 FRKTLFVAIALGFVGVTLLLKPSLHVDELIAGALGLLSGALAGIVYIHVTQLGRAGEPDW 182
Query: 203 LAIPALFYVVWNG---FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ V G + F D L LIG G+ + + + V
Sbjct: 183 RTVFYFTLVCTLGGGIWMLVHDFHRVEWDDLLLLIGLGVSATIAQLALTRAYRTGNPLVV 242
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
G + Y+ +L V + I + + R I+V++ V+ +
Sbjct: 243 GSLAYSTVVLASVFGIVIWGEMLSLDRWFAVAIIVLSGVISVTSR 287
>gi|239502047|ref|ZP_04661357.1| hypothetical protein AbauAB_07012 [Acinetobacter baumannii AB900]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 86/289 (29%), Gaps = 17/289 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
GT+ + A LWG T F + L + + +
Sbjct: 12 GTIAILVASFLWGTTGTAAAFAPTLGPLAIGAVAMGGGGLLQALIASQAIREHRQFIGRN 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +G++ LA + + S P+I+ L F ++ L+
Sbjct: 72 ISIILLGVVAVGIYPLAFYSSMHYAGITIGTV----VSIGSAPLIAAVLERFFDRKVLSK 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGS 192
++ +L ++ + ++++ +A + +
Sbjct: 128 KWFLSFVLGVVGVSLLSMGESHAAQESTNEWNKIFGIFLGLVAGATYSLYSWAAKRLIDR 187
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
M ++ ++ G + + + + +F +G+K
Sbjct: 188 GIAAKAAMGMIMGGGAVILLPTLLITGGGLLQSSTNLLVAGYMMLIPMFLGYLLFGFGLK 247
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + PL+ + ++ ++ + + + + ++ I +++
Sbjct: 248 TVNASKATTLTLFEPLVAAIFAIVLVGESVSWIGWVGMFLIFICILMLS 296
>gi|167041748|gb|ABZ06491.1| putative integral membrane protein DUF6 [uncultured marine
microorganism HF4000_010L19]
Length = 297
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 94/296 (31%), Gaps = 6/296 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ M +++ ++WG T + ++ + S R V ++
Sbjct: 1 MKKTMSLIYLIICSLIWGTTFIAQDMGMDNIGPFTFNSVRFFVGFLVVSPLVLLLEKKKI 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +K K +++ L + F +LL ++F + +
Sbjct: 61 YEQIKIKPNKFSKLIIIIGIFLFLGTVFQQVSLLHTDVANSAFFTIFYVPMVPIIVYFLF 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE----- 194
++L+ + L ++ +++ S + V A +A I +G
Sbjct: 121 SKKLHWSIWPSVLACVIGGYLLSDISNATIRFGDSLVLIGALFWALHIIYIGKIIEHFDL 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
FFI + I A+ + + L L F + +G +
Sbjct: 181 PFFIALLQNLIVAILSFILAIMFEEIDISKIKLETIEILYAGILSGGAAFALQIFGQRNI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ I+ + +++ IL Q + I +++ +++ L + K
Sbjct: 241 SPAPAAIVMSLEGVFAAIAAWIILNQFLGLNNIIGCTLILGGVLLSQLAPIYEKNK 296
>gi|114764014|ref|ZP_01443255.1| hypothetical protein 1100011001340_R2601_19210 [Pelagibaca
bermudensis HTCC2601]
gi|114543606|gb|EAU46620.1| hypothetical protein R2601_19210 [Roseovarius sp. HTCC2601]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 96/295 (32%), Gaps = 16/295 (5%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ I+ + + + V + E++ R + ++ L +
Sbjct: 1 MLGFCIIAPLADAVAKLIADKVPLAELVFFRFAVQAALLVPLMLLTGRSFRLRRRVAGIV 60
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
++ + V L FV P + + LG F+ E + ++
Sbjct: 61 FLRTLMHILGIGMMVTA------LRYLPLADAIAIAFVMPFMLLILGHYFMGEEVGWRRL 114
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG---------SSEGFFIE 199
+A + + L++ + + A+ A F+ I S +
Sbjct: 115 VACAIGFIGTLLVVQPAFSDVGWPALLPLGVALNFSLFMITTRQISRDIDAVSLQAISGL 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M ++ I + ++ G + ++ L+ GLL + + ++ ++ A +T+
Sbjct: 175 MAMVVIAPMMLLLPAGRIPEIQWVSVSLETWSLLLSIGLLGTVAHLLMTWSLRYAPGATL 234
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
M+Y + I ++ + V T+ I++ A + L K
Sbjct: 235 APMQYLEMPFATLFGFMIFQELPNPVATLGICIIMSAGLFILARERAIHRAQKAA 289
>gi|290968067|ref|ZP_06559616.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
gi|290781973|gb|EFD94552.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L]
Length = 298
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/288 (11%), Positives = 83/288 (28%), Gaps = 11/288 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G + I WG+ +QFL V + + R++ + + ++ +
Sbjct: 8 RGFICCAVGAITWGLNGAVSQFLFMHYPVDPAWLSAIRMICAG-FLLLFLILPKKHRKIG 66
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+++ + L + ++ ++ + + V +V +
Sbjct: 67 CMLRDPTSLKKLILMTVFGLILCQYSYLSSIKYSNSGTATILQTLCVVFLSLYLAVRFRR 126
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGSSE 194
R + +++A LL + + + + +A A F + +
Sbjct: 127 RPKNRELLAILLAVAGVYLAATDGNPASMVLSGKGLFWGLAAAVGAVIFPTLSQGLAWQW 186
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
V I + + L T + F F G+
Sbjct: 187 EAPPVNAVAMIFGGLLLTFTLRLWRAFPVLDQAGWTAVAFIIIVGTVISFSFFIQGVCDI 246
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+M PL+ S L V + + +++ + + ++
Sbjct: 247 GPLKGTLMGTLEPLIASAVSACWLHTSFHAVELLGYALILSTVFIIMV 294
>gi|126733284|ref|ZP_01749031.1| hypothetical protein RCCS2_03994 [Roseobacter sp. CCS2]
gi|126716150|gb|EBA13014.1| hypothetical protein RCCS2_03994 [Roseobacter sp. CCS2]
Length = 300
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 83/298 (27%), Gaps = 14/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLE------QVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ F+ A T + + L + L++ R L++ + V
Sbjct: 7 NPPLAVAFMLTATAFIAGTMVAAKSLGTDTLGPPLHPLQISHGRFLFAFMVIASVAVVLR 66
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++ +G+ + A+ + F+ P+ + L
Sbjct: 67 PKIAQ--------PNLGLHIGRTLFGWGGVTLMFAAVAFIPLSDATAISFLNPIFGMLLA 118
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
L ER+ + AA + +L LI+ + +A + I +
Sbjct: 119 IPLLGERVGPWRWFAAFMALLGALILLRPGPESFQLAGLLALGAAVTMGMELIFIKKLAN 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ +L I + + + + L G+L + F + RA
Sbjct: 179 REPALQILLINNAIGLCIATLAVLPVWTMPTPAQWGALAALGILMASAQTCFVNAMARAD 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
S + Y + + I D V + ++ + + K
Sbjct: 239 ASFITPFSYVTLIFATFYDLLIFDVWPDWVSILGAVTILSGASLLAWRERRARPQIKR 296
>gi|303257366|ref|ZP_07343380.1| putative permease, DMT family [Burkholderiales bacterium 1_1_47]
gi|302860857|gb|EFL83934.1| putative permease, DMT family [Burkholderiales bacterium 1_1_47]
Length = 313
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 87/298 (29%), Gaps = 12/298 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T+ G L A + WG + Q++ + S R+L S + ++ S
Sbjct: 18 NRTLYGVLLATLASVFWGSMGVCVQYIFENTNTQPQALSSFRLLLSGTVLVILNLFLSR- 76
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L L + K + S L F A+ + TP+++ +
Sbjct: 77 -RPLLAVLSSLKGTAGIALSGLELLGAHLTFFIAIYYSNAGTAAIFLATTPLLAGIYLFL 135
Query: 138 FLKERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPV 190
K+R + + L +L++ + + A ++ + P+
Sbjct: 136 RGKKRFTAKEGLCCALAFFGVLLIVSKGDFSTFQFNWMAVFWGMISAVFASIYSIQPKPL 195
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + A ++ L F ++
Sbjct: 196 IDRWGVVPVASWGMMAAGIAGLFLANPIVTAEGLDAKAWLALSYIVLAGTVAAFWLYLAC 255
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+K T G++ P V + + + + + +V+ + + + + S
Sbjct: 256 LKYISPVTAGLVVCLEPTSAYVFGIMFMNLKLGWIECVGIAMVISQVFILSIRSKERS 313
>gi|229060179|ref|ZP_04197549.1| Uncharacterized transporter [Bacillus cereus AH603]
gi|228719219|gb|EEL70829.1| Uncharacterized transporter [Bacillus cereus AH603]
Length = 295
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 95/291 (32%), Gaps = 11/291 (3%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ + +++G ++ + E++ R +++ + + + K
Sbjct: 1 MIISMVIFGSVGFFSVQ-TNLPSFELVFVRCIFATIFLSLCWLITGQYKHDKWE----RK 55
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
V ++ L +W F A + Y + P+I + +GS+ KE+L L +I
Sbjct: 56 EVIQVLICGFFLVFNWVFLFKAFENMSVTVAISVYHLAPIIVLIIGSIVFKEKLTVLSVI 115
Query: 150 AALLIILSLLIM------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ ++ + L++ + + + + + G M L
Sbjct: 116 SIIICFVGALLIAGINKNFSFDSLMSSGMVWGLLAALFYAFTTLFGKGIKNMSAYAMTFL 175
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+++ L T + + V+ +F ++ + I+
Sbjct: 176 QTFLGIFLLIPFIDFDAFHGLTQSNWTYIIATGLIHTGLVYYLFFDSLRDLSTKLISILV 235
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ P + I+ + ++ ++ + M + + + K K +
Sbjct: 236 FLDPAVAILLDTVLTGFRPTLMQVSGITLIFVGMALTFKKSKNKTQKFKKQ 286
>gi|126738406|ref|ZP_01754111.1| hypothetical protein RSK20926_08077 [Roseobacter sp. SK209-2-6]
gi|126720205|gb|EBA16911.1| hypothetical protein RSK20926_08077 [Roseobacter sp. SK209-2-6]
Length = 346
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 71/283 (25%), Gaps = 2/283 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ ++W + + S L ++ R L S + L +
Sbjct: 50 LRAIAMGLAFALMWSSAFTSARIIVMDASPLFSLAVRFLISGLIGVAIARWLGQSWRLTR 109
Query: 83 DTLKNPKAVGMLVFSAT-ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K G+ + L +I A L T +F +
Sbjct: 110 GQWKATIIFGVCQNALYLGLNFVAMQWIEASLAAIIASTMPLLAALATWMIFGERIRPLG 169
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L L +A +++I+ I + IAV +
Sbjct: 170 LLGLLAGLAGVVLIMGTRIGAGVDLFGVFLCVIAVLALTIATLALRGATSGGNFMMVVGL 229
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ I + S F + I+ + R
Sbjct: 230 QMLIGSAILFAAAPLSEEIFVNPTLRLGLAFAYTTIVPGLMATFIWVLLLNRIGAIRAAT 289
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ P+ + + +L + + + I IV + ++ L
Sbjct: 290 FHFLNPVFGVAVASMLLGERLGMLDLIGVAIVTLGILAVQLSR 332
>gi|92112877|ref|YP_572805.1| hypothetical protein Csal_0748 [Chromohalobacter salexigens DSM
3043]
gi|91795967|gb|ABE58106.1| protein of unknown function DUF6, transmembrane [Chromohalobacter
salexigens DSM 3043]
Length = 288
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/288 (13%), Positives = 95/288 (32%), Gaps = 13/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T F+ A + T + L + + +R+L++ V F +++ L
Sbjct: 2 QKTKWVYTFLAVAVLAISTTAPLVK-LADATAPVIACYRMLFATCLVAFLVLFGRDSLLK 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + K + + +L +H+ + +L + + P+ + +G
Sbjct: 61 I-----DGKRLAYCAVAGFLLGLHFITWFSSLDYTSVASSVTLATMQPLFAFIIGYFLYH 115
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
ERLN + A++ +L +I+ L A + F + S
Sbjct: 116 ERLNRGAALGAMVSVLGGIIIGWGDYRVSGVALWGNLLALSAAFLATVYFFVGQHALKSV 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
A+ ++ +G + +F + L + +Y +
Sbjct: 176 SLNVYTFYCYGFAAIAIALYCLVTGNALSAVNRDDLLIFFLLALLPTLLGHSVLNYCTRF 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+S V + P+ V + +L + + + V+ ++ +L
Sbjct: 236 ISVSLVSMAMLCEPVGASVLAWLLLGTLPTVTQLVGGALTVLGVLYFL 283
Score = 36.8 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 33/109 (30%)
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ C + A V + G + + + G L F + + ++
Sbjct: 34 VIACYRMLFATCLVAFLVLFGRDSLLKIDGKRLAYCAVAGFLLGLHFITWFSSLDYTSVA 93
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + PL + F+ + ++ + + V+ ++
Sbjct: 94 SSVTLATMQPLFAFIIGYFLYHERLNRGAALGAMVSVLGGIIIGWGDYR 142
>gi|82546295|ref|YP_410242.1| hypothetical protein SBO_3963 [Shigella boydii Sb227]
gi|81247706|gb|ABB68414.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 86/278 (30%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G+
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMHPTP-------FKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYTRHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 203 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 300
>gi|34540168|ref|NP_904647.1| hypothetical protein PG0333 [Porphyromonas gingivalis W83]
gi|34396480|gb|AAQ65546.1| membrane protein, putative [Porphyromonas gingivalis W83]
Length = 302
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/291 (9%), Positives = 84/291 (28%), Gaps = 5/291 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + G + +G+ PL+T + S ++ +R ++ + G
Sbjct: 1 MTSSRLYGLAVGILSSATFGLIPLFTLPVSAKGASFELILFYRFFFAAIAIGILHRLSGG 60
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF--- 133
+ + + +G L + H ++ + + + ++ F
Sbjct: 61 SFKVSRADIGPLVLLGFLYAGTALFLFHGYGYMASGVATTIHFLYPLFVTALMLLFFGER 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L V L L + L+ + +G +++++ F ++
Sbjct: 121 LSPVPLTAIFIALIGVGLLMGLTGGGDRVGLTGFVIVAISALCYALYIVFVNRSRIRIMP 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+A + G L+ + ++
Sbjct: 181 GRRLTFYVFVAAAGFCLINVLVRQGEVAPLPDAASWGNILLLALVPTVISNLALVVAVRN 240
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + PL ++ V++ + + + G ++IA+ + +
Sbjct: 241 IGSTLTSALGAMEPLTSVLVGVWVFDEVLGASAIVGMGCILIAVGLIVFSE 291
>gi|120597805|ref|YP_962379.1| hypothetical protein Sputw3181_0975 [Shewanella sp. W3-18-1]
gi|120557898|gb|ABM23825.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
W3-18-1]
Length = 311
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 95/302 (31%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++ A LW + L S L+++ VL S+ + + +
Sbjct: 2 KSSNLAYVYGMAAVFLWSTVATAFKIALSYYSPLQLVFVAVLTSIIALTSILAWQKKLSL 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + L+ P + +++ A + V+ L + L
Sbjct: 62 LKQQFLRRPMFYLVT--GLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
K+ L I AAL+ + I+ I S +A+T + +
Sbjct: 120 KQHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGLALTSTLLWCLYWIVNTKDQ 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L ++ + F ++ +K
Sbjct: 180 GDPVVSLLLSFLIGLPFIAMTLVLTDALPSFSLKAIFAGMYVGLFEMGITFVLWLMALKT 239
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A + + + M + +P++ I +IL++ I + ++ M++ L K
Sbjct: 240 ATRTANISTMVFLSPVMSIGFIAWILQETIAMTTYLGLAFILSGMMLQQLLPRYTERKRS 299
Query: 313 TK 314
K
Sbjct: 300 GK 301
>gi|116619944|ref|YP_822100.1| hypothetical protein Acid_0816 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223106|gb|ABJ81815.1| protein of unknown function DUF6, transmembrane [Candidatus
Solibacter usitatus Ellin6076]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 80/288 (27%), Gaps = 6/288 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ P + + WG T L + LE + ++ R + S +
Sbjct: 2 SRHPLFKAYIALVAVCFFWGTTYLGIRMALESFPPMVLVCVRYMISGSLMLLFARVRGLY 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L K+ + + + V+ + + + S + V + G+
Sbjct: 62 LPKGKELAWACFSGLLTLGIGNGALVYSETMVPSGIAGLIVTISPFWMVGAEALLPGGAR 121
Query: 138 FLKERLNHLQIIAALLIIL-----SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + I A +L + I L L + ++ + G
Sbjct: 122 LHAPTIGGMAIGLAGAAMLFTPDPGTHGVDHKLVIGFLVLTFGMAGWSFGSIIQRRKTGK 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ L + SG T L + + + Y +
Sbjct: 182 AHPVVAGGVQQLAAGLAMIPITLASGDLTIHWKTRGVTAILYLVTFGSLVGYSAYVYAMD 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
R ++ V I Y ++ + ++P T+ ++ + V
Sbjct: 242 RLPVAIVSIYPYVNAVVAVALGWLFYREPFGIRETLSMIVIFAGVAVV 289
>gi|89110086|ref|AP_003866.1| predicted permease [Escherichia coli str. K-12 substr. W3110]
gi|90111667|ref|NP_418378.4| inner membrane protein, predicted permease [Escherichia coli str.
K-12 substr. MG1655]
gi|157163420|ref|YP_001460738.1| putative transporter [Escherichia coli HS]
gi|170022044|ref|YP_001726998.1| hypothetical protein EcolC_4072 [Escherichia coli ATCC 8739]
gi|170083413|ref|YP_001732733.1| permease [Escherichia coli str. K-12 substr. DH10B]
gi|170681167|ref|YP_001746336.1| putative transporter [Escherichia coli SMS-3-5]
gi|191172686|ref|ZP_03034224.1| putative transporter [Escherichia coli F11]
gi|194438283|ref|ZP_03070374.1| putative transporter [Escherichia coli 101-1]
gi|215489279|ref|YP_002331710.1| predicted permease [Escherichia coli O127:H6 str. E2348/69]
gi|218561015|ref|YP_002393928.1| permease [Escherichia coli S88]
gi|218692230|ref|YP_002400442.1| putative permease [Escherichia coli ED1a]
gi|218701346|ref|YP_002408975.1| putative permease [Escherichia coli IAI39]
gi|238903009|ref|YP_002928805.1| putative permease [Escherichia coli BW2952]
gi|253775417|ref|YP_003038248.1| hypothetical protein ECBD_4080 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163894|ref|YP_003047002.1| putative permease [Escherichia coli B str. REL606]
gi|256026018|ref|ZP_05439883.1| permease [Escherichia sp. 4_1_40B]
gi|300931613|ref|ZP_07146923.1| integral membrane protein DUF6 [Escherichia coli MS 187-1]
gi|300954674|ref|ZP_07167114.1| integral membrane protein DUF6 [Escherichia coli MS 175-1]
gi|301024090|ref|ZP_07187803.1| integral membrane protein DUF6 [Escherichia coli MS 196-1]
gi|301645135|ref|ZP_07245093.1| integral membrane protein DUF6 [Escherichia coli MS 146-1]
gi|306813789|ref|ZP_07447965.1| permease [Escherichia coli NC101]
gi|307140642|ref|ZP_07499998.1| permease [Escherichia coli H736]
gi|312965401|ref|ZP_07779634.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312971765|ref|ZP_07785939.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331660504|ref|ZP_08361438.1| hypothetical transport protein YijE [Escherichia coli TA206]
gi|331685688|ref|ZP_08386271.1| hypothetical transport protein YijE [Escherichia coli H299]
gi|78113648|sp|P0ABT9|YIJE_ECOL6 RecName: Full=Uncharacterized inner membrane transporter yiJE
gi|78113659|sp|P0ABT8|YIJE_ECOLI RecName: Full=Uncharacterized inner membrane transporter yiJE
gi|85676117|dbj|BAE77367.1| predicted permease [Escherichia coli str. K12 substr. W3110]
gi|87082351|gb|AAC76925.2| inner membrane protein, predicted permease [Escherichia coli str.
K-12 substr. MG1655]
gi|157069100|gb|ABV08355.1| putative transporter [Escherichia coli HS]
gi|169756972|gb|ACA79671.1| protein of unknown function DUF6 transmembrane [Escherichia coli
ATCC 8739]
gi|169891248|gb|ACB04955.1| predicted permease [Escherichia coli str. K-12 substr. DH10B]
gi|170518885|gb|ACB17063.1| putative transporter [Escherichia coli SMS-3-5]
gi|190906990|gb|EDV66591.1| putative transporter [Escherichia coli F11]
gi|194422720|gb|EDX38716.1| putative transporter [Escherichia coli 101-1]
gi|215267351|emb|CAS11800.1| predicted permease [Escherichia coli O127:H6 str. E2348/69]
gi|218367784|emb|CAR05578.1| putative permease [Escherichia coli S88]
gi|218371332|emb|CAR19164.1| putative permease [Escherichia coli IAI39]
gi|218429794|emb|CAR10619.1| putative permease [Escherichia coli ED1a]
gi|238862818|gb|ACR64816.1| predicted permease [Escherichia coli BW2952]
gi|242379480|emb|CAQ34295.1| predicted permease [Escherichia coli BL21(DE3)]
gi|253326461|gb|ACT31063.1| protein of unknown function DUF6 transmembrane [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975795|gb|ACT41466.1| predicted permease [Escherichia coli B str. REL606]
gi|253979952|gb|ACT45622.1| predicted permease [Escherichia coli BL21(DE3)]
gi|260451220|gb|ACX41642.1| protein of unknown function DUF6 transmembrane [Escherichia coli
DH1]
gi|281181015|dbj|BAI57345.1| conserved hypothetical protein [Escherichia coli SE15]
gi|294490473|gb|ADE89229.1| putative transporter [Escherichia coli IHE3034]
gi|299880545|gb|EFI88756.1| integral membrane protein DUF6 [Escherichia coli MS 196-1]
gi|300318364|gb|EFJ68148.1| integral membrane protein DUF6 [Escherichia coli MS 175-1]
gi|300460577|gb|EFK24070.1| integral membrane protein DUF6 [Escherichia coli MS 187-1]
gi|301076562|gb|EFK91368.1| integral membrane protein DUF6 [Escherichia coli MS 146-1]
gi|305852787|gb|EFM53234.1| permease [Escherichia coli NC101]
gi|307629021|gb|ADN73325.1| permease [Escherichia coli UM146]
gi|309704368|emb|CBJ03717.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310334142|gb|EFQ00347.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312290075|gb|EFR17962.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312948523|gb|ADR29350.1| permease [Escherichia coli O83:H1 str. NRG 857C]
gi|315138509|dbj|BAJ45668.1| transporter YijE [Escherichia coli DH1]
gi|315617740|gb|EFU98345.1| conserved hypothetical protein [Escherichia coli 3431]
gi|320196787|gb|EFW71409.1| hypothetical protein EcoM_00826 [Escherichia coli WV_060327]
gi|323949438|gb|EGB45327.1| integral membrane protein [Escherichia coli H252]
gi|323954281|gb|EGB50066.1| integral membrane protein [Escherichia coli H263]
gi|330908267|gb|EGH36786.1| hypothetical protein ECAA86_04302 [Escherichia coli AA86]
gi|331052453|gb|EGI24490.1| hypothetical transport protein YijE [Escherichia coli TA206]
gi|331077159|gb|EGI48374.1| hypothetical transport protein YijE [Escherichia coli H299]
gi|332345941|gb|AEE59275.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|323974232|gb|EGB69362.1| integral membrane protein [Escherichia coli TW10509]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 89/278 (32%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q +A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYLAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVAWLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + TV ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGTVEGSGIVLIVLALALVS 289
>gi|323491253|ref|ZP_08096438.1| transporter DMT superfamily protein [Vibrio brasiliensis LMG 20546]
gi|323314379|gb|EGA67458.1| transporter DMT superfamily protein [Vibrio brasiliensis LMG 20546]
Length = 314
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/304 (19%), Positives = 114/304 (37%), Gaps = 13/304 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF--------LEQVSVLEVISHRVLWSLPGVFFAIV 72
G + +L+ + P Y Q + + R++WS +F ++
Sbjct: 10 SEQTKGVSASILSSLLFALIPAYVQLQPQMAASLIAGGESHWLAVQRIIWSTL-LFAVLL 68
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ L LL LK K + SA +A + F++A + + YF P++ V
Sbjct: 69 LVTKRLPLLISALKERKMWFRYLISALFVAPQYWLFVWAPANGETLNLALGYFTLPIVMV 128
Query: 133 FLGSVFLKERLNHLQIIAALLIILS-LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
+G +E L LQ +A L +L + L SG+ + L +A+ + Y RK IP+
Sbjct: 129 MIGRFVYQESLTRLQKVACLFALLGTIWAYALSSGVSWVVLVVALGYPVYFINRKAIPLP 188
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G I+ +L A+F + S G ++ ++ Y
Sbjct: 189 ADIGLAIDHIILLPFAVFGMFILYPSEYFLHLPATTNFYYL--GLAVVAVTPMLLYLYAY 246
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ +S G++ Y P + + + I I + ++ A+V + +
Sbjct: 247 TKLPVSLFGMLGYVEPTFIFIVGLLI-GSTIAPQEIPTYLFIICALVALITDSRKRMKSI 305
Query: 312 KTKK 315
+ +
Sbjct: 306 RVSR 309
>gi|304310633|ref|YP_003810231.1| Integral membrane protein DUF6 [gamma proteobacterium HdN1]
gi|301796366|emb|CBL44574.1| Integral membrane protein DUF6 [gamma proteobacterium HdN1]
Length = 311
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 91/287 (31%), Gaps = 13/287 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G ++ + + + Q + +++ R+ +LP ++
Sbjct: 21 RGLAYMLAGTFFFSAKAVLVKLAYQYPIDAVTLLTLRMGMALPFYLIIGIFVFRTKLPTP 80
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ V F+ LA F + L L ++ P I + L V K +
Sbjct: 81 LRWADHFNVIAFGFAGYYLA--SLFDLMGLQYISAGLERLILYLYPTIVLLLSMVLFKRK 138
Query: 143 LNHLQIIAALLIILSL--------LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
+ ++ A L+ + + I+ + ++ + + A +
Sbjct: 139 IGRVEWTALLVAYIGVLIVYAKDAAILGAQGPLGVVLIFLCAVTFAIYVVGSGYMIPRMG 198
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL-IGYGLLNSFVFCIFSYGIKR 253
+ +++ + ++ + + + I + ++GIK
Sbjct: 199 AMRFTVYAMSVACVAIIIHFFLTRPLASLNVQVELLVISAIIAVFCTVLPTFLMAWGIKL 258
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
++ P+L I+ + FIL + V + +VVIA+
Sbjct: 259 LGAPRAALVGTVGPMLTILLAYFILGEEFTWVHAVGMLMVVIAVSFI 305
>gi|262040400|ref|ZP_06013645.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042263|gb|EEW43289.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 100/298 (33%), Gaps = 12/298 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G L V A +LWG + + QF+ Q+S + R+L++ +
Sbjct: 15 SSKKGMLNVLIAAVLWGSSGVCAQFIMQESQMSSPFLTMTRLLFAGLILLMLGFVHGD-- 72
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + A+ +L FS F+ + + F++P I V ++
Sbjct: 73 RIFRVLQNRRDALSLLFFSLFGALTVQFTFLMTIEKSNAATATVLQFLSPTIIVAWFALA 132
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
K R L + A + ++ H L IA ++A + +
Sbjct: 133 RKARPTPLVLGAICTSLAGTFLLVTHGNPTTLSISPAALFWGIASAFAAAFYTTYPSTLI 192
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ G + + ++ G F + F + S F ++ G
Sbjct: 193 ARYGTLPIVGWSMLFGGAMLLPFYGGQGTDFVVNGSLLLAFFYLVVIGTSLTFSLYLNGA 252
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + GI+ PL + S+ +L + +++ ++V+ + +
Sbjct: 253 QKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILASVVLIAIDSRRQVR 310
>gi|238791768|ref|ZP_04635405.1| Drug/metabolite transporter superfamily protein [Yersinia
intermedia ATCC 29909]
gi|238728872|gb|EEQ20389.1| Drug/metabolite transporter superfamily protein [Yersinia
intermedia ATCC 29909]
Length = 317
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 84/289 (29%), Gaps = 9/289 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
M+G + V A ILWG T F VS + + + + +
Sbjct: 1 MLGMVGVLIAAILWGTTGTAATFAPAVSAVAIGAVAMGFGGLLQAMIAAGSITRYIDKLF 60
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+G + LA + + + + ++ I L L R
Sbjct: 61 QQWRLLLIGGSAVAIYPLAFYASMHLAGVTVGTVISIGSAPLLSAFIEYGLEGQKLTVRW 120
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSSE 194
I+ +IL + + + S +A A +
Sbjct: 121 MLGAILGVAGMILLSMAESTGHDTLVQSSNVMFGVILGLLAGFTYALYSWAARRMMQQGL 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
M + ++ F G + + + + + YG+ R
Sbjct: 181 PSKTAMGAIFGLGGMLLMPVLFVTGAPLLASWSNAAVGIYMALVPMFIGYICYGYGLARI 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S + P++ + +V I+ + + + + G+VV ++ +P
Sbjct: 241 TASMATTITLIEPVVAAILAVIIVGERLPIMGWVGIGLVVACLIFITVP 289
>gi|296125467|ref|YP_003632719.1| hypothetical protein Bmur_0417 [Brachyspira murdochii DSM 12563]
gi|296017283|gb|ADG70520.1| protein of unknown function DUF6 transmembrane [Brachyspira
murdochii DSM 12563]
Length = 292
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 88/298 (29%), Gaps = 16/298 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ +GT+ +F ++WG + + + + +++ ++ R L +
Sbjct: 1 MANKERLGTIGIFLTALIWGYSFVAVKVVVQEIEPFYLVGFRNLAGGIFLSLIFF----- 55
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + + L + + + +F + FL
Sbjct: 56 ---KRMKKITKRDILLSIPVGAALFLGFFLQTMSSKFITASKVAFFTGSYVIFIPFLAWA 112
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPV 190
K+R + IAA++ ++ L ++T G L V K +
Sbjct: 113 LYKKRPHIAAFIAAVITVIGLYLLTSFDGLGSIKAGDLFALLCAVVFAVHLILIDKMLEY 172
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++A + + + + + + +
Sbjct: 173 VDGIIMASLQLIVAGIISLSAGIITSTPFDINAVSKESMYSLIYLSIGATGIAYLLQTVS 232
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
K + G++ L + + +K P+ I ++ A+ + + + I
Sbjct: 233 QKYVNPNKAGLILSLESFLGALGGIIFMKDPLTVNFVIGGICMISAIFICEIGSTIKK 290
>gi|239815730|ref|YP_002944640.1| hypothetical protein Vapar_2752 [Variovorax paradoxus S110]
gi|239802307|gb|ACS19374.1| protein of unknown function DUF6 transmembrane [Variovorax
paradoxus S110]
Length = 309
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 80/291 (27%), Gaps = 12/291 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ ++W + T+ L Q E+ R +++ + + + G +
Sbjct: 11 VWLMVAVTLMWATAGVVTRHLAQAHSFEITFWRSFFTMLALLVILPLWRGRAVFSQIRSG 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ S V + F+ AL + + P+++ +F+ RL
Sbjct: 71 GREL----WISGVCWTVMFTAFMVALTLASTASVLVTMSLGPLLTALAARLFIGHRLPVR 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA--------RKTIPVGSSEGFFI 198
+A ++ L + M + + ++ + + ++G I
Sbjct: 127 TWVAIVVAGLGIAWMYGTQLMQGGAAGGSLLGTLVALCVPLAGATNWTVVQHARAKGHDI 186
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + F L + + + K
Sbjct: 187 DLVPAVLIGAALSALLTLPFALPFQANAHDLGLLAFLGVFQLAIPCVLAVLCAQVLKAPE 246
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
V ++ + I + + +V+ A+V L +
Sbjct: 247 VALLALLEVIFGIALAWIGAGEEPAASVLTGGALVIGALVFNELLALRGRR 297
>gi|149204779|ref|ZP_01881742.1| hypothetical protein RTM1035_10000 [Roseovarius sp. TM1035]
gi|149141748|gb|EDM29801.1| hypothetical protein RTM1035_10000 [Roseovarius sp. TM1035]
Length = 297
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 76/261 (29%), Gaps = 8/261 (3%)
Query: 49 QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFF 108
+ L++ R L++L + + + V + +
Sbjct: 41 PLHPLQISHGRFLFALLAISVTVALVRPRF--------TRPDLRTHVKRSGLGWGGVTLM 92
Query: 109 IYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIP 168
A + F+ PV+ + L L ER+ ++ AA++ + I+
Sbjct: 93 FAAAAYIPLSDATAISFLNPVLGMILAIPLLGERVGPVRWAAAVIALTGAAILIRPGSGV 152
Query: 169 LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP 228
+ + A+ +A C + I + G +L + + + +
Sbjct: 153 VETGALLALGAALCLGAELIFLKRLSGREGPWQILLVNNAIGLSIATLAVIWVWAPPTAA 212
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L G+L + F + R S V YTA + + + D
Sbjct: 213 QWAALAALGVLMALAQMAFVNAMARGDASYVAPFFYTALIFAGLYDGLVFGVWPDITSIT 272
Query: 289 VFGIVVIAMVVYLLPTVINSG 309
+++ + +
Sbjct: 273 GAAVILCGAGLLIWREGRRRR 293
>gi|160333448|ref|NP_001094953.1| transmembrane protein 22 [Mus musculus]
gi|148689085|gb|EDL21032.1| mCG51522 [Mus musculus]
Length = 412
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/303 (10%), Positives = 87/303 (28%), Gaps = 14/303 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ L +F + + G L T+ + V LE+I R + + V Y
Sbjct: 100 QSRKMWLVLFGSALAHGCVALITRLISDRSKVPSLELIFIRSVLQVLSVIVVCYY--QEA 157
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +I + F I + + + +++ L
Sbjct: 158 PFGPSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEK 217
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIP 189
+ + + L + L ++ L ++ + +
Sbjct: 218 MAYVDMATVVCSILGVCLVMIPNIADEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRS 277
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + F E + +LI L ++ F Y
Sbjct: 278 IREKISMWTALFTFGWTGTIWGLSTMFVLQEPIIPLDGATWSYLIAICLCSTAAFLGVYY 337
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + V +++ ++ +V + +L I++I++ V +
Sbjct: 338 ALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSVYDVFGGVIIMISVFVLAGYKLYWRN 397
Query: 310 KNK 312
+
Sbjct: 398 VRR 400
>gi|322369293|ref|ZP_08043858.1| hypothetical protein ZOD2009_07389 [Haladaptatus paucihalophilus
DX253]
gi|320551025|gb|EFW92674.1| hypothetical protein ZOD2009_07389 [Haladaptatus paucihalophilus
DX253]
Length = 320
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 85/290 (29%), Gaps = 10/290 (3%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++WG + + + L + + + R + + A+ +
Sbjct: 1 MLFALLA-VIWGSSFVAIETGLRTLPPVLFAALRYDIAGALLLVAVAVLGRRRDDFQWRP 59
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV-------F 138
++ + + ++ + L ++ F
Sbjct: 60 VTRTDWTLVGIGGVFMFGLYLALVFTGQRYVTSGVGAVVLSLKPVVTPLFALALLPNERF 119
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + + +++++ S + + L +A T A +
Sbjct: 120 NALEVAGVLLALVGVVVVADPTSLGGSTVGVGLLFVAATVFALASVLTQRLRTTLPALSQ 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEH-FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ ++A+ AL + G +++ + I+ ++ +
Sbjct: 180 QAWMMAVGALVLHATSAALRGWPSVSFTQPALVSLAYLAVVVSIVGYFIYFDLLEGIGAN 239
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
++ Y P++ + +L +PI F ++V V+ +
Sbjct: 240 EANLVNYVVPVVATLFGALLLGEPITDATITGFLVIVAGFVLLKWAALKR 289
>gi|295675273|ref|YP_003603797.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1002]
gi|295435116|gb|ADG14286.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1002]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 99/295 (33%), Gaps = 11/295 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G + A ++ G Q S V+ R ++ + L
Sbjct: 19 RRGAAEMSIAMLMSGTIGWLV-VSSQQSPFNVVFFRCIFGGATLALVCAVLGLFRRELF- 76
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ K +G+ + + V+W A + + Y P + V LG++ +ER+
Sbjct: 77 ---SWKMLGLALLGGAAIVVNWVLLFAAYSRASISMATAVYNTQPFMLVGLGALVFRERI 133
Query: 144 NHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ I ++ + L+ + L L +A +A +I +G
Sbjct: 134 SASTIAWLVVAFVGLVFVVKVEPAVLAVPGQYLVGVAYAVGAAAMYAVSSIITKRLKGTP 193
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ L +L ++ F + + ++ + ++ + I++ S
Sbjct: 194 PHLLALIQVSLGVLLLAPFVRFDALPASGVQWLELVVLGVVHTGLMYVLLYGAIQKLPTS 253
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
G + + P++ I+ Q + ++ + ++++A L I K +
Sbjct: 254 MTGALSFIYPVVAIIVDRLAFGQTLAWIQVLGAVLILLAAAGVNLGWRIVPQKKR 308
>gi|238895269|ref|YP_002920004.1| hypothetical protein KP1_3321 [Klebsiella pneumoniae NTUH-K2044]
gi|238547586|dbj|BAH63937.1| hypothetical protein KP1_3321 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 298
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 88/282 (31%), Gaps = 11/282 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + A I+ G + L + + +V+ R L + IV S
Sbjct: 1 MQLTRGVWQMSLAMIISGSIGAFV-LLSGLPLTDVVFWRCLIGALTLLVFIVLSRQPFSR 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L + + V L V+W A + + Y P + V +G V +
Sbjct: 60 L-----TRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGE 114
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW----SAYCFARKTIPVGSSEGF 196
++ ++ LL ++I+ P + A F T +
Sbjct: 115 R-VSAVKWGWLLLAFGGVVILLSSELTPAHEEGLTTGVLLALGAAFFYALTAIIARKLHP 173
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ I L VV + P LI + ++ + I++
Sbjct: 174 LPGQHIAFIQVLVGVVMLLPLVHAPELTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPT 233
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
G + + PL+ +V + + V+ + +++ A
Sbjct: 234 PVTGSLSFIYPLVAMVVDYLVFHHALSAVQLLGGMLILFAAA 275
>gi|224370612|ref|YP_002604776.1| RhaT [Desulfobacterium autotrophicum HRM2]
gi|223693329|gb|ACN16612.1| RhaT [Desulfobacterium autotrophicum HRM2]
Length = 283
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 93/281 (33%), Gaps = 10/281 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
A +L+G L+ +FL + L ++ R ++ + ++ K +
Sbjct: 9 LAVVLFGFAGLFGKFLTC-TPLVIVFGRTAFAALALLPLVLASKANPLGEKTPRLKVYIL 67
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+LAVHW F ++ L ++ P+ + L F K+++ ++ A
Sbjct: 68 Q-----GVLLAVHWCTFFLSIQISTVALGLLTFSTFPLFTTLLEPFFFKQQIKQKDLVMA 122
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM----CVLAIPA 207
L++ L+++ AV + F + + + + E
Sbjct: 123 LIVFAGLILVLPSFDFSQKPAQGAVWGTVSGFTFALLAIFNKKNLTFEPPVRLAFFQNLF 182
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ F L + + +F ++ + +TV I+ P
Sbjct: 183 AAATILPIFIFVPQTVPAPGEIILIATLGIVFTALAHTLFISSLEGLRATTVSIITCLEP 242
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
L I+ + +L + I+V++ + L +
Sbjct: 243 LYGIILAALLLHEIPGLRMVAGGTIIVLSTLFASLNRKHSQ 283
>gi|169796426|ref|YP_001714219.1| hypothetical protein ABAYE2387 [Acinetobacter baumannii AYE]
gi|213156462|ref|YP_002318882.1| hypothetical protein AB57_1506 [Acinetobacter baumannii AB0057]
gi|215483889|ref|YP_002326114.1| hypothetical protein ABBFA_002212 [Acinetobacter baumannii
AB307-0294]
gi|301347233|ref|ZP_07227974.1| hypothetical protein AbauAB0_13318 [Acinetobacter baumannii AB056]
gi|301513197|ref|ZP_07238434.1| hypothetical protein AbauAB05_16479 [Acinetobacter baumannii AB058]
gi|301597009|ref|ZP_07242017.1| hypothetical protein AbauAB059_14362 [Acinetobacter baumannii
AB059]
gi|332855291|ref|ZP_08435796.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332871626|ref|ZP_08440099.1| putative membrane protein [Acinetobacter baumannii 6013113]
gi|169149353|emb|CAM87237.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
gi|213055622|gb|ACJ40524.1| hypothetical protein AB57_1506 [Acinetobacter baumannii AB0057]
gi|213988953|gb|ACJ59252.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332727515|gb|EGJ58939.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332731316|gb|EGJ62611.1| putative membrane protein [Acinetobacter baumannii 6013113]
Length = 302
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 89/289 (30%), Gaps = 17/289 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L V A LWG F + +S L + + V + F +
Sbjct: 16 GFLSVLFAAFLWGTAGTAASFAKGISPLVIATISVGFGGLIHTFLSLKAIKKDYRKLFDY 75
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + ++V A + + + S P+ SV L + K +L+
Sbjct: 76 KTKVLIAVIVSILCPFAFYSSVSLAGVSIGTV----ISIGCAPLFSVMLEWLLDKRKLSL 131
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGS 192
+I+ +L L +++++ ++ A +
Sbjct: 132 KWLISFILGFLGVVLLSYAGEHSHQHQGGQSERLLGVFFGLLSSLSYATYSWIMKNLIHK 191
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
M V+ + ++ H F + L + + FS+G+K
Sbjct: 192 GIDSRAAMGVIFGISAVLLLPTLLITATHLFNYPNNIWVALYIPIVPMFLGYLFFSFGLK 251
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
R S + + + +V ++ + + + ++ + ++V
Sbjct: 252 RIPASQAMTLALVEIPVAALLAVVVVGESLTMNSYLGLVLIFLCVIVLT 300
>gi|149203075|ref|ZP_01880046.1| hypothetical protein RTM1035_20071 [Roseovarius sp. TM1035]
gi|149143621|gb|EDM31657.1| hypothetical protein RTM1035_20071 [Roseovarius sp. TM1035]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/294 (10%), Positives = 93/294 (31%), Gaps = 5/294 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G + + L+ + ++ + R + + + ++ F G +
Sbjct: 2 NTHLKGLIITALGVLFVVPDSLFVRLIDG-DAASIAFWRGITAGSVILTGVLLFQGFRGI 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++A+ F++A+ F PV + +FL
Sbjct: 61 REVAKTGKHGLLY----TFLIAITAPGFVFAVSLTSVANVVFILASMPVFAAIFSRIFLG 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E ++ ++ + L ++ SG + + A + ++
Sbjct: 117 ESISKRMVLTMAGVFAGLGVIAWGSGETHGAHWHGDLIALGVSASFAGAMTTARQLRAVS 176
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ AIP F + ++ +G S C+ + G + + V
Sbjct: 177 MIPAIPLAFLGASLAIWPAAQPMTVWHANWPLILAHGAFISVSTCLLTLGPRYLASAEVA 236
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
++ +L + ++ + + +V+ A+ L + ++ + + +
Sbjct: 237 LLILLESVLAPLLVWAVIGEDPGPWAILGGVVVIGALFASNLWALAHNRRLRNR 290
>gi|74314448|ref|YP_312867.1| hypothetical protein SSON_4117 [Shigella sonnei Ss046]
gi|73857925|gb|AAZ90632.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 30 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 82
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 83 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 142
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 143 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 202
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 203 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 262
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 263 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVMALALVS 300
>gi|84687398|ref|ZP_01015276.1| membrane protein, putative [Maritimibacter alkaliphilus HTCC2654]
gi|84664556|gb|EAQ11042.1| membrane protein, putative [Rhodobacterales bacterium HTCC2654]
Length = 290
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 83/284 (29%), Gaps = 9/284 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G L A+ L + L + + V + + R V + G + +
Sbjct: 9 KGILLYMAAFFFMSTMELMAKLLTQDLHVAQAVWARYAGQTVIVVVWLFPQLGQVVRTRY 68
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ L + F AL S + PV+ G++FL E
Sbjct: 69 PGLQFARSVL-------LLIGTAVFFTALTYLGLAEASAVMNINPVLITVGGAIFLGETF 121
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ ++ LI+ + SA C+A + L
Sbjct: 122 GVKRAFGVGAALIGALIVIRPGTDVFSPATLLPLISASCYAGFILLTRKVGHDEDPRTSL 181
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL + ++ ++ + G+L + + ++ A+ S +
Sbjct: 182 LYAALLGAIITSIVVPFYWQTPDLRQVGLMCAIGILGALGQFLMIQSVRYAEASAIAPFS 241
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y A L+ D I GI+V + +Y+ +
Sbjct: 242 YIALLVAAFWGYVAFGDVPDLATWIGGGIIVAS-GIYIWHRERS 284
>gi|325576782|ref|ZP_08147397.1| DMT superfamily drug/metabolite transporter [Haemophilus
parainfluenzae ATCC 33392]
gi|325160988|gb|EGC73106.1| DMT superfamily drug/metabolite transporter [Haemophilus
parainfluenzae ATCC 33392]
Length = 295
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/289 (16%), Positives = 112/289 (38%), Gaps = 6/289 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G L A +L+G ++ L+ +S ++ +R+L++ P V +++ F +L++
Sbjct: 2 LRGILISLLASLLFGYMYYFSTLLKPLSGTDIFGYRMLFTFPFVALSVIMFKQKQALVEH 61
Query: 84 TLKNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + ++ F++A SF Y + P++ V G + K
Sbjct: 62 LKRIKNRPLFALSYIICGALMGYQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRIIFK 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
ER++ L+ IA L+ + ++ + G + F+ + + G F
Sbjct: 122 ERISTLKFIAVLIAAIGVISNIILKGGLSWEAIVICVGYTTYFSIRKALKNTDLGAF--C 179
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ V + + N L+ GL++ + ++ +G
Sbjct: 180 LEMISLLPVSVYFALQTDFATVQESNPNIWGLLVLLGLISGSALIAYVIASNMLPMNLLG 239
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ Y +LM++ S I + +D +F +V+AM + + V
Sbjct: 240 LLGYVETILMVIISFLI-GEEMDADSYPLFICLVLAMSLIIFDGVYKQR 287
>gi|282857008|ref|ZP_06266259.1| putative membrane protein [Pyramidobacter piscolens W5455]
gi|282585169|gb|EFB90486.1| putative membrane protein [Pyramidobacter piscolens W5455]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 82/274 (29%), Gaps = 3/274 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ--FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
G L+V + +L+G+ PL + + + R F + Y
Sbjct: 2 KENSERAGALYVIASAVLFGLMPLLAKIAYASGANAFTAAFGRFFTGSVMAFAYLEYKGV 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + + + + + + T + ++ + ++ V ++ +F +
Sbjct: 62 PLRVGRRQMGELAFLSVFY-ALTPVLLYLSYGFIGSGLATTLHFTYPVAVMCLMGLFFRA 120
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
F ++ + AA + +L + L+ A + ++ Y A + + F
Sbjct: 121 RFTPRQVLCAALCAAGIFLLYRPGRSADGFGTALAAASGLLYAGYIIALGRSHLRDVDIF 180
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I + A + +GG + G L F G+
Sbjct: 181 VITFWISVFSAFMIGAFAALTGGLAWNQGASAWAAEAGLGLLATVLALAFFQKGLFLCGE 240
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
++ PL I + + + +
Sbjct: 241 VKASLLSTFEPLTSIAVGLAVYGEAMTPRLAAGM 274
>gi|269103851|ref|ZP_06156548.1| permease [Photobacterium damselae subsp. damselae CIP 102761]
gi|268163749|gb|EEZ42245.1| permease [Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 92/297 (30%), Gaps = 10/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L+ A +LW + L S ++++ S + Y
Sbjct: 1 MNERKALLYGLSAVLLWSTVATAFKITLNYFSPVQMLVVASAVSAIALTGISFYQGTLSQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + L P L ++ A + + + ++FL
Sbjct: 61 LKRTLLLRPWYYLAL--GLINPLAYYLVLFKAYELLPASQAQPLNYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
+++ IA L L ++++ I L +A+ + I +S
Sbjct: 119 GQKIRRQDWIACLFGYLGVIVIATKGDITALQFDSPTGVALALLSTLLWALYWIINTKNS 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + +L + + F+ + F ++ +K
Sbjct: 179 ADPVLGVLLGFLLSLPFSLGLSFAIDTWHAVPWQGWLAVSYVGLFEMGITFVLWLSALKL 238
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + + +P + ++ I+ + I I G++++ +++ L +
Sbjct: 239 TTNTAKISNLIFISPFISLLLLATIIGETIAPSTIIGLGLIIVGLMIQQLKSSKQKK 295
>gi|228915286|ref|ZP_04078879.1| Uncharacterized transporter [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228844229|gb|EEM89287.1| Uncharacterized transporter [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 304
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 13/262 (4%)
Query: 32 CAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
++WG + LE + + R+L + + + L LKD
Sbjct: 16 FTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA---- 71
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ +F + Y T S VTP+++ L VFL E++ I
Sbjct: 72 --IFLFGTLGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAILAFVFLNEKMKANGWIG 129
Query: 151 ALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + + ++ G + + +A + F +T + + +
Sbjct: 130 GVISFIGIAFISFSQGGSIQFNSGGLFILLAAVLESLFFVFQTSYLKKYGFLPFTIYTIL 189
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ +++ E + + + +Y I S Y
Sbjct: 190 SSTVCMLIFLPGMYQEILVAPLEVNLSVIYLGLFPTVLPYIALAYIISHTGASEATSSLY 249
Query: 265 TAPLLMIVSSVFILKQPIDTVR 286
P++ + L + V
Sbjct: 250 LTPVIACFIAWVWLGEVPTLVS 271
>gi|226357593|ref|YP_002787333.1| hypothetical protein Deide_1p01360 [Deinococcus deserti VCD115]
gi|226319584|gb|ACO47579.1| Conserved hypothetical protein; putative membrane protein
[Deinococcus deserti VCD115]
Length = 295
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/293 (15%), Positives = 96/293 (32%), Gaps = 9/293 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
++ S + G L+ A +++ T+ L V V + R L + +
Sbjct: 1 MNPPADSPQPVRGVLYYIGALLMFAWLDATTKVLTAHYPVPLVAAVRYGTQLTLMMALL- 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ T G++ + L + F AL + F+ P++
Sbjct: 60 ------PRPRRTHLTSTRPGLVAARSVCLVIVTLFMGLALSRLPLAEATSIVFIAPLLVA 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L L ERL+ + +A + L +L++ G + + +A C A +
Sbjct: 114 LLSGPLLGERLSTGRWLAVIGGFLGVLLIIRPGGQLDVLGVLFALLAALCNAAYQLLSRV 173
Query: 193 SEGF-FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + A V ++ L L+ G+ +F+
Sbjct: 174 LNTEKTVNLLYHSALAGAVVFTMIVPFTFGGPPPSLFTALLLLSLGVSGGLGHYLFTLAF 233
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ A S + + Y L V + + Q D V I I+ ++ + +
Sbjct: 234 RDAPASQLAPLTYMQLLWAGVIGLMVFGQLPDAVSLIGMLIIAVSGISVAIRR 286
>gi|237654290|ref|YP_002890604.1| hypothetical protein Tmz1t_3634 [Thauera sp. MZ1T]
gi|237625537|gb|ACR02227.1| protein of unknown function DUF6 transmembrane [Thauera sp. MZ1T]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 80/284 (28%), Gaps = 12/284 (4%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++ ++++ L + L I R + + + L
Sbjct: 18 LLLVLTTLIAAAGWIFSKEALTGMPPLIFIGLRFAIAGLVLALFSLPQLRALD------- 70
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
L+ A + + + SF + V+ +F +R
Sbjct: 71 RRGLRNSLLVGALFAGGMVLWILGLSHSSHLGEASFISSMGIVMVPVFARLFFGDRPPAS 130
Query: 147 QIIAALLIILSLLIMTLHSGI----PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A L + ++L G A A F + V + + +
Sbjct: 131 TWFALPLALAGFACLSLDGGFEVELGQWFFLGAALVFALMFNVNSHIVRNVPVRALSVVQ 190
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + + L L + F + +G S ++
Sbjct: 191 MLAVGVLVLPPALLIETWPQAWSAPVLGWLLASALLATTLRFLLQLHGQSLTTPSHAALI 250
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
P+ +++ + + + T++ G++ +A+VV +
Sbjct: 251 MMLEPVWTALAAAWWFAETMSTLQLAGCGLIFLALVVSRWAWIR 294
>gi|196043080|ref|ZP_03110319.1| transporter, EamA family [Bacillus cereus 03BB108]
gi|196026564|gb|EDX65232.1| transporter, EamA family [Bacillus cereus 03BB108]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMLSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGLKK 294
>gi|83859919|ref|ZP_00953439.1| membrane protein, drug/metabolite transporter (DMT) family protein
[Oceanicaulis alexandrii HTCC2633]
gi|83852278|gb|EAP90132.1| membrane protein, drug/metabolite transporter (DMT) family protein
[Oceanicaulis alexandrii HTCC2633]
Length = 291
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 90/285 (31%), Gaps = 16/285 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + A ++WG + L T L L R L + +
Sbjct: 1 MSRSLDLALTASAPMIWGTSYLVTTNLLPDGYPLTAAVLRALPAGLLLMLM--------- 51
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + V +V W A G + + + P+I ++L S+ L
Sbjct: 52 -TRSLPPVRWLGRLFVLGGLNFSVFWSALFIAAYRLPGGVAATLGAIQPLIVLYLSSLLL 110
Query: 140 KERLNHLQIIAALLIILSLLIMTLH-----SGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L + AA+ I + ++ L G+ +++ + A
Sbjct: 111 STSLTARNLTAAVAGIGGVALLVLGPEAQLDGVGVVAALVGAVAMAMGSVLTRRWQPPVS 170
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
L + + F L F+ + + +C++ GI R
Sbjct: 171 ALTFAGWQLTAGGVLLLPVALFVEPALPPLTLAHAAGFVWLGLVGAALTYCLWFRGIARL 230
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + + +PL ++ +L Q + ++ + IV+ + +
Sbjct: 231 GPAAITPLGFLSPLTAVLLGWVVLGQALSPLQILGALIVMGCVAL 275
>gi|15640113|ref|NP_229740.1| hypothetical protein VC0081 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587654|ref|ZP_01677417.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727806|ref|ZP_01680882.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147674409|ref|YP_001218334.1| hypothetical protein VC0395_A2435 [Vibrio cholerae O395]
gi|153818223|ref|ZP_01970890.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153822142|ref|ZP_01974809.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227080317|ref|YP_002808868.1| hypothetical protein VCM66_0081 [Vibrio cholerae M66-2]
gi|229508364|ref|ZP_04397868.1| permease [Vibrio cholerae BX 330286]
gi|229508954|ref|ZP_04398444.1| permease [Vibrio cholerae B33]
gi|229517068|ref|ZP_04406514.1| permease [Vibrio cholerae RC9]
gi|229606639|ref|YP_002877287.1| permease [Vibrio cholerae MJ-1236]
gi|254851467|ref|ZP_05240817.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255743959|ref|ZP_05417914.1| permease [Vibrio cholera CIRS 101]
gi|262151334|ref|ZP_06028468.1| permease [Vibrio cholerae INDRE 91/1]
gi|262167253|ref|ZP_06034964.1| permease [Vibrio cholerae RC27]
gi|298501143|ref|ZP_07010943.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9654478|gb|AAF93259.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548095|gb|EAX58170.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121629930|gb|EAX62342.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126511252|gb|EAZ73846.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520348|gb|EAZ77571.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146316292|gb|ABQ20831.1| putative membrane protein [Vibrio cholerae O395]
gi|227008205|gb|ACP04417.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227011917|gb|ACP08127.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229346131|gb|EEO11103.1| permease [Vibrio cholerae RC9]
gi|229354071|gb|EEO19004.1| permease [Vibrio cholerae B33]
gi|229354637|gb|EEO19559.1| permease [Vibrio cholerae BX 330286]
gi|229369294|gb|ACQ59717.1| permease [Vibrio cholerae MJ-1236]
gi|254847172|gb|EET25586.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255738442|gb|EET93832.1| permease [Vibrio cholera CIRS 101]
gi|262024317|gb|EEY43007.1| permease [Vibrio cholerae RC27]
gi|262030873|gb|EEY49503.1| permease [Vibrio cholerae INDRE 91/1]
gi|297540177|gb|EFH76238.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 83/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALSLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA + L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|300716328|ref|YP_003741131.1| transmembrane protein [Erwinia billingiae Eb661]
gi|299062164|emb|CAX59280.1| putative transmembrane protein [Erwinia billingiae Eb661]
Length = 310
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 7/305 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+S + GT V A ILWG T + +S L V + +
Sbjct: 3 SSGQRLGGTAGVLIAAILWGTTGTAATYAPGLSPLAVGAVAMGIGGLLQALIAATTIIRQ 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L G L + LA + + + ++ +I L +
Sbjct: 63 RRLIARHWPFLLTGALAVAVYPLAFYTSMRYAGVTVGTVISIGSAPLLSALIETRLDGLR 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF- 197
L ++ ++ + L + + G + + S+
Sbjct: 123 LTKQWAIGALVGVAGMALLCMAESGGHGAGNGYAMAGIALGLLAGFTYALYSWSARRLMQ 182
Query: 198 ------IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
M ++ G + + + + + YG+
Sbjct: 183 CGVLPRAAMGATFGAGGLLLMPVLLLTGAPLLAAWNNAAVGIYMALVPMFIGYVCYGYGL 242
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
R S + P++ + +V ++ + + T ++V ++ V LP +
Sbjct: 243 ARIPASMATTITLLEPVVAALLAVVLVGERLPTYGWAGVALIVASLAVITLPLSMLRFPA 302
Query: 312 KTKKS 316
++S
Sbjct: 303 GRRRS 307
>gi|269104220|ref|ZP_06156916.1| hypothetical protein VDA_000375 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160860|gb|EEZ39357.1| hypothetical protein VDA_000375 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 326
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 96/315 (30%), Gaps = 19/315 (6%)
Query: 21 LPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVY------ 73
T MG +LWGI + T L+ + ++ R + + +
Sbjct: 2 NRTAMGWTAAIFIGLLWGIPWIVGTPILKVMDAQVLVWARYTIAFLTLAIILNVGIATGK 61
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ + +L + P++ +
Sbjct: 62 LEKKKDFKLNWENRHDIIWSAACGIIGQGAFSFLSFLSLDYITASENGVIQGLIPILILT 121
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+G R LQ++AA+ + + I+ + I A +
Sbjct: 122 VGFFRHNARFTTLQMVAAVGAFVGVAILVMDPKSETNGFNIGHLICFGSAASFATMAYAR 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFL------------GNIPDTLFLIGYGLLNS 241
+ +A ++ + G F + I ++
Sbjct: 182 AELAEKYGSVATMFHQFIFASIGFGLYLVFTGADLSSALGIFSSPLRILCITILGVGISG 241
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ I+ Y ++R + G+ PL V +VF L + + +R + +V+++M++++
Sbjct: 242 ISYLIYIYAMERVGVDGTGMALNLMPLSSFVLAVFALGESVTPMRLLAIAVVIVSMMMFM 301
Query: 302 LPTVINSGKNKTKKS 316
+ + + +KS
Sbjct: 302 KFGNDKAKETEKQKS 316
>gi|290960933|ref|YP_003492115.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260650459|emb|CBG73575.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 313
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/294 (8%), Positives = 73/294 (24%), Gaps = 1/294 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G + +LWGI L + +++VS V+ R + + G ++
Sbjct: 2 TARGWVLFSLMGVLWGIPYLMIKVAVDEVSPSMVVFVRCALGAALLLPFAIRQGGLPGVV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ A ++ + + T + + F + L
Sbjct: 62 LRHWRPMLAFAVIEVIGPWWTLTDAERHLSSSTAGLLIAGVPIVSVLLARFFGDTERLGA 121
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R + + + + L+ + +
Sbjct: 122 RRMTGLALGLGGVGVLTVPHLTGGNALSLAEVLITVIGYATAPLIMARHLKQVPTLQLIA 181
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + + + F F I+ + +
Sbjct: 182 PVLLLSAIVYAPAATLTAPSTLPSPPALISLAALGVICTALAFVAFLELIREVGPTRATV 241
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
Y P + + + L + + F +++ + + + + ++
Sbjct: 242 FTYVNPAVAVAAGAVFLDERLTPAILSSFALILAGSFLATASSASPASRGGGRR 295
>gi|254787574|ref|YP_003075003.1| hypothetical protein TERTU_3691 [Teredinibacter turnerae T7901]
gi|237687477|gb|ACR14741.1| putative membrane protein [Teredinibacter turnerae T7901]
Length = 308
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 92/282 (32%), Gaps = 21/282 (7%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G ++ + L + L+ + +E + + R + + + + L + +L
Sbjct: 23 GFGALYLSVFLLSVNGLFARSIE-LDSTSITQLRSVIAGGAIIALCLLQKRSLLVAPRSL 81
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ F +L +HW + A+ + + + F PV +V L +F R
Sbjct: 82 L------VVYFLGVLLGLHWVTYFQAMQSSSVAVGILALFTHPVFTVLLEPIFQGRRPEG 135
Query: 146 LQIIAALLIILSLLIMTLHSG------------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
++AAL++ + +M + + A+ + +
Sbjct: 136 KDLLAALVVAGGITVMVSAQLGGSDQLSAEQIRTGVFWGVGSALLFAFRNTAQKYWLHHV 195
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + AL + + I L L+ + S +K
Sbjct: 196 PSTSLMFHQVLVVALMLAAFTD--WSAVSGMAPINWLLLLLLGSFCTAGAHTFVSVALKH 253
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
TV ++ P+L + + IL + + I+V
Sbjct: 254 LPAKTVALISCLQPVLAALFAWLILSEKPAIQVLLGGAIIVA 295
>gi|229045369|ref|ZP_04192031.1| Uncharacterized transporter [Bacillus cereus AH676]
gi|228724969|gb|EEL76264.1| Uncharacterized transporter [Bacillus cereus AH676]
Length = 304
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 82/263 (31%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ L SVFL E++ I
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNTGSASLIISVTPIVTAILASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I RA S
Sbjct: 189 LSSTVCMLIFLPGVYQEILAAPLEVNLSVIYLGVFPTVLPYIALAYIISRAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|191637494|ref|YP_001986660.1| Permease, DMT family [Lactobacillus casei BL23]
gi|190711796|emb|CAQ65802.1| Permease, DMT family [Lactobacillus casei BL23]
gi|327381540|gb|AEA53016.1| Transporter, drug/metabolite exporter family [Lactobacillus casei
LC2W]
gi|327384703|gb|AEA56177.1| Transporter, drug/metabolite exporter family [Lactobacillus casei
BD-II]
Length = 336
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 85/294 (28%), Gaps = 10/294 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+ + G F I WG + ++TQ L V L ++ R+ ++ +
Sbjct: 23 HTNQKLKGVSFAVIGAIFWGASGIFTQTLFTDAGVKPLWLVGIRLFFAGLLLLLWS-GVQ 81
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
L A+ M+VF+ + + A+ + F+ PV +
Sbjct: 82 EPRMFLAIWKNRHDAILMIVFAFLGMVPSQLTYFLAINAGNAATATILQFLGPVFILLYV 141
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + + ++ L ++ ++ + LSLA A +
Sbjct: 142 AFATHQMPRRIDFVSITLALIGTYLLVTRGHLTGLSLAPAAVFWGIMAGVSQALYTLLPR 201
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY------ 249
+ + ++ + L P + VF
Sbjct: 202 TLLAKYDARAVTGWSMLLGSLPFLPQYVLHPNPLLTLPDFGAIAFVIVFGTMFAYLLVLG 261
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ G++ PL +V L + ++++ ++ LP
Sbjct: 262 SLNYISPVATGMLSAFEPLTATTLAVTRLHIAFGPAEWLGGILIILNTLLQALP 315
>gi|163740756|ref|ZP_02148149.1| hypothetical protein RG210_12986 [Phaeobacter gallaeciensis 2.10]
gi|161385747|gb|EDQ10123.1| hypothetical protein RG210_12986 [Phaeobacter gallaeciensis 2.10]
Length = 320
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/285 (10%), Positives = 85/285 (29%), Gaps = 4/285 (1%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G L + I + + L + + +++ R + + I +
Sbjct: 8 LGILLMLGFCITAPMGDAVAKLLGAHIPLGQLLFVRFAAQVLLLAPLIWATGRIWRMQGR 67
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFI---YALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ +L + ++ A+ V+ +G + L
Sbjct: 68 VLRLTFVRTLLHIAGIGAMFTGLKYLPLADAVAIAFVMPFIMLLLGKYVLGEEVGMIRLL 127
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ ++ + + ++++ A+ K + M
Sbjct: 128 ACIVGFGGTLLVIQPSFVTVGWHALWPLMVAVIFALFMLVTRQIAKDTDPVGLQAVSGTM 187
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + + S N L GLL + + ++ ++ A +T+
Sbjct: 188 ACVLLAPVLLLGQITDSPVLALITPNAEQWGLLAAIGLLGTAAHLLMTWSLRYAPAATLA 247
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
M+Y + + ++I + + + I I + A + +L
Sbjct: 248 SMQYLEIPVAALIGLWIFDELPNGLAAIGILITIAAGLFVILRER 292
>gi|157363091|ref|YP_001469858.1| hypothetical protein Tlet_0224 [Thermotoga lettingae TMO]
gi|157313695|gb|ABV32794.1| protein of unknown function DUF6 transmembrane [Thermotoga
lettingae TMO]
Length = 290
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 90/286 (31%), Gaps = 18/286 (6%)
Query: 28 LFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+F++ WG++ + T+ + + R L +L + F F L+L
Sbjct: 4 IFIWLVVFFWGMSFVATKVVVSYIPPATAALIRFLIALVFLIFVNRKFPKILNL------ 57
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +++ F L+ S P++ + + K++ +
Sbjct: 58 -----HGFFAGFWGITMYFYFENAGLVHTFPTNASLIVSSAPILHILFSHIIQKKKATMM 112
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTW------SAYCFARKTIPVGSSEGFFIEM 200
+ IA+ + + ++ L+ L + + + +S+
Sbjct: 113 EYIASFIAFSGVAVVILNGKFALKINPVGDIMLFGAASVWVLYTYHVEKMPNSDSLEGVA 172
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + + ++ + + + + +++ GIK+
Sbjct: 173 AITFWGVVTLIPFSLVEKNSWVSFNPASFVSLMYLGVVCSGIAYVLWNKGIKKVGSRYTT 232
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
Y P+L ++ LK+ + +V++ + ++
Sbjct: 233 NTIYFIPVLTSIAESIFLKRLPNLYTIFGGAMVLVGLWLFNFSRRR 278
>gi|145298860|ref|YP_001141701.1| DMT family permease [Aeromonas salmonicida subsp. salmonicida A449]
gi|142851632|gb|ABO89953.1| permease of the drug/metabolite transporter (DMT) superfamily
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 92/299 (30%), Gaps = 13/299 (4%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ LF F +W + ++ + S + R + + + + +
Sbjct: 3 LAFLFPFSCMAIWSGNAIVSKLAVGLLSPAALAWSRWMVAAIILTPFLA----HRAWRDR 58
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ + + ++ YA T +TP+++V L L+ER
Sbjct: 59 AKLRAGFYQLAALALLGMVLNQTLGYYAAQTLGATEIGLMMGLTPLMTVLLSIWLLRERP 118
Query: 144 NHLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
++ L+ IL L I+ GI + S+ + ++ Y +
Sbjct: 119 TWGALLGGLISILGLTILLGQGDPSRLFTQGIHIGSVYMLLSAGTYALYSVLLKKWDLGL 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
M + + + + + L L ++ ++ GI
Sbjct: 179 DNWSMLYGQVLCSLLFLTPFYLLVDGQWPDGRALWLILYAGIPTSALSPWLWMQGIALLG 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
S I P++ ++ L + + + I G+ + +++ L + +
Sbjct: 239 ASRTAIFMNLLPVMTAALAISWLGETLTSYHLIGGGMTPLGVLLAQLLVQPVLLRRRAS 297
>gi|119899353|ref|YP_934566.1| hypothetical protein azo3063 [Azoarcus sp. BH72]
gi|119671766|emb|CAL95680.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/294 (8%), Positives = 78/294 (26%), Gaps = 20/294 (6%)
Query: 29 FVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ A L+ + ++ E + + + R + F + L
Sbjct: 23 LMLVAPALFAANMVAARWAESAAIPPVFLAFGRWALAFAIFFPFVAARVRAHRAL----L 78
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
A + + + + + + + P + + ++ + + +
Sbjct: 79 RAHAPDLALLAVLGMGLTVAPQYIGAQETSATNVALIFAACPALVALIEALVWRAPVGSV 138
Query: 147 QIIAALLIILSLLIMTLHSG--------------IPLLSLAIAVTWSAYCFARKTIPVGS 192
+ L I +L++ L + ++ R +
Sbjct: 139 RAAGMSLAIWGVLLVLTRGDLAALGRLAFGRGDLWVLGAACAWSLYTVLGRRRALGALPG 198
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ A+ + SG F + + + + + ++
Sbjct: 199 EVKLAALIAGGALALAPFAALELASGAVPDFGDGRLYAALVFLAIVPSLGAYFCYDRLVE 258
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
R + + Y PL +++ +L + F +++ + + L
Sbjct: 259 RVGAAGASMSMYLIPLYAALAAWPLLGEVPAFFHVAGFALILGGVALAGLQKRR 312
>gi|126461928|ref|YP_001043042.1| hypothetical protein Rsph17029_1160 [Rhodobacter sphaeroides ATCC
17029]
gi|126103592|gb|ABN76270.1| protein of unknown function DUF6, transmembrane [Rhodobacter
sphaeroides ATCC 17029]
Length = 294
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/299 (10%), Positives = 91/299 (30%), Gaps = 10/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + + + + + ++ + + +++ L++ P +
Sbjct: 1 MENLRGIVMMVVSMAGFAMEDMFVKLAAANMPTGQILMLLGLFAAPLFWALA------RR 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K L G +++ V F+ AL Q S P++ F ++FL
Sbjct: 55 EGKAVLSREALAGPILWRNGGEMVGTAGFVTALTLGQLSSVSAILQAAPLVVTFGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER+ + A + + ++++ G SL + + +
Sbjct: 115 GERVGWRRWSAIAVGFVGVIVVIRPGPDGFDTASLWAVLGVAGLAIRDLATRRVAPSTST 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ A + + + G L+G + + + +S
Sbjct: 175 MQVGAWAFLTVAVLGAMMLAVGGGATWPTPGQAALLLGAVSFSFVGYWTLILATRVGDVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y+ + ++ + + D +++ +Y + + +
Sbjct: 235 AIVPFRYSRLVFAMLIGFLVFHERPDGWMLAGAALII-GSGLYSFMREQRLRRLSMRAA 292
>gi|210632034|ref|ZP_03297174.1| hypothetical protein COLSTE_01067 [Collinsella stercoris DSM 13279]
gi|210159750|gb|EEA90721.1| hypothetical protein COLSTE_01067 [Collinsella stercoris DSM 13279]
Length = 305
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/280 (10%), Positives = 80/280 (28%), Gaps = 18/280 (6%)
Query: 49 QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL---------LKDTLKNPKAVGMLVFSAT 99
++ +E+ + R+L + + + G + +
Sbjct: 2 GLTAMEIAALRMLIASVFLVPVLFAMGMGKRFEEGAGRNSLRFFRISRRGLFWSALVGFF 61
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLL 159
LA+ + A+ +S +P+ V LG + E + +II+ + ++
Sbjct: 62 GLALASATYYAAIEHIGMSTSSVLMCTSPMFGVVLGRLLYGEGITSQKIISLVFNVMGCA 121
Query: 160 IMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE--------GFFIEMCVLAIPALFYV 211
+ S++ C + + A+
Sbjct: 122 FAVTGGVFEIGSISPIGVGMGICSGLMGCLLTMFSKAATRYAHPLTVVFYGFTAGAVLLF 181
Query: 212 VWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR-AKLSTVGIMEYTAPLLM 270
+ + + + L + + G+ + + S V ++ +
Sbjct: 182 CFANPFTAVARGVPSEFYWVAAAFGLLPTVLAYLFYMTGLSKGLEASEVPVIASFETVTA 241
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+V V + K+P + I + ++++ + K
Sbjct: 242 VVLGVVLFKEPFGMGKLIGVCLALVSIDIMSFDMAEQRRK 281
>gi|126725434|ref|ZP_01741276.1| hypothetical protein RB2150_04498 [Rhodobacterales bacterium
HTCC2150]
gi|126704638|gb|EBA03729.1| hypothetical protein RB2150_04498 [Rhodobacterales bacterium
HTCC2150]
Length = 288
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 96/295 (32%), Gaps = 9/295 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
PT G LF+ + + L ++ VL+++ R + VFF + +
Sbjct: 2 SPTTKGILFILTGLLFVTGMDAIAKALSVEIKVLQIVWARYTGQMLIVFFLV-------A 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ FF ++L + + PV + ++FL
Sbjct: 55 HRLPSTMQSNFPKTQLLRSSAQFGATLFFFFSLSMIGLAEATALVNIIPVFMLIGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E+ + IA + ++ I+ + A+ +A+C++ + +
Sbjct: 115 GEKFGARRAIAVVAALIGATIIAQPTSGVFTPAALLPIGAAFCYSVYALATRYAGRSEDP 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M L ALF V + ++ + + +L S G + S
Sbjct: 175 MTSLFYSALFGAVLINVMVFFIWEPVSMKAWIMMASVAILGSLGQFFTIKGYSNVEASVA 234
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
Y + ++ + I + + I +V+ A +Y+ K
Sbjct: 235 APFTYISLIMATFWGIVIFGEFPTSSTLIG-ALVIAASGLYVWHRETRIKKRAKS 288
>gi|89093326|ref|ZP_01166275.1| membrane protein, putative [Oceanospirillum sp. MED92]
gi|89082305|gb|EAR61528.1| membrane protein, putative [Oceanospirillum sp. MED92]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 91/300 (30%), Gaps = 11/300 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
++ + GTLF+ A + + ++ + L + +F + G
Sbjct: 7 NSSVNDNIRGTLFMVFAMAAFAVEDMFIKAAADHLSLGTLLILFGSGGMLIFMVMATLKG 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ + L + L + TP++ V G
Sbjct: 67 EAIYNPALFSRVQLIRSAFEIVGRLFFALAITLSPLSSASA-----ILQATPLVVVLGGI 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+F KER+ +A + + +L++ + +I S FA + + ++
Sbjct: 122 LFFKERVGWQHWLAIMAGFIGVLMIVRPGLDSFSAASIFAVISTIGFAGRDLATRAAPPT 181
Query: 197 FIEM------CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
++ I + + L + L + + +
Sbjct: 182 LTNFQLGIYGFMVLIICGAILQAWYAESVDLAPLLDSSAGLKTACAIIFGVIAYNFLTKA 241
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
++ ++S V YT + V + + + D + + ++ + + L + + K
Sbjct: 242 MRTGEISMVTPFRYTRLIFAFVLGIIVFNERPDLLTLLGGLVIAGSGIFLLWQSRKRTKK 301
>gi|325283317|ref|YP_004255858.1| hypothetical protein Deipr_1089 [Deinococcus proteolyticus MRP]
gi|324315126|gb|ADY26241.1| protein of unknown function DUF6 transmembrane [Deinococcus
proteolyticus MRP]
Length = 337
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 86/308 (27%), Gaps = 12/308 (3%)
Query: 6 TKKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSL 64
T + + + G + ++WG T + L Q+ +++ R +
Sbjct: 2 TATPSGTHATPSLPATSALRGAALLGLVTLIWGSTFAVIKTLGAQLDPAAMVAWRFTVAA 61
Query: 65 PGVFFAIVYFSGGLSLLKDTLKNPK--AVGMLVFSATILAVHWGFFIYALLTRQGFLTSF 122
+ A ++ + + L +G AL T T+F
Sbjct: 62 AVLAPATLWQIQRRRRKYAARRPWTAALWRDAAILSAWLLASYGTQTVALQTTTANRTAF 121
Query: 123 SYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYC 182
++ ++ + RL +A L + L +++ G + A AV +
Sbjct: 122 FTALSVLLVPLWLAAVQGRRLPAAVWLALPLALGGLGLLSWEGGALNVGDAWAVGCAVTY 181
Query: 183 ---------FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFL 233
A + + + + + L L
Sbjct: 182 AGFIIALEGMAGRYPALPFTLAQVVWVAALGWGWTLLSGSAALPAASGAAAWAQAWGPLL 241
Query: 234 IGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIV 293
+ + + G + ++ P+ V S ++ + I + +V
Sbjct: 242 YLGVFATALTTLLQTLGQRHVSAPVASLIYSLEPVSASVFSFLLIGEKIGPRGLLGGALV 301
Query: 294 VIAMVVYL 301
V + V+
Sbjct: 302 VASTVLSS 309
>gi|302522441|ref|ZP_07274783.1| permease DMT family [Streptomyces sp. SPB78]
gi|302431336|gb|EFL03152.1| permease DMT family [Streptomyces sp. SPB78]
Length = 313
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 67/257 (26%), Gaps = 3/257 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + L + V VL V+ R ++ + ++
Sbjct: 8 LVLVALVWGSSYLVAKSATDVLPVLAVLFARYALGALACGAVVLVRRRAW--TRTEVRAG 65
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+G+ + +L + A + + +
Sbjct: 66 ALLGVTQAAVLVLETYGVAHTSAAHAGLLISLTIVLTPPLDRTRPPLPARFYAAALLCVV 125
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L+ G L+ A V + + + + +
Sbjct: 126 AVGLIGAGGEGFGLPRGGDLLMLGAAVVRAGHVALVGRVTARHRVDPVHLTTVQMVTGTV 185
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + G + L L F F ++ ++R S ++ T P+
Sbjct: 186 LVLPFAVRHFGALAASDAATGSRLLYLALLCGLFAFLAQTWAVQRTSASRASLLLGTEPV 245
Query: 269 LMIVSSVFILKQPIDTV 285
+ + + + + +
Sbjct: 246 WAVATGLVVGGERLTPW 262
>gi|296273114|ref|YP_003655745.1| hypothetical protein Arnit_1584 [Arcobacter nitrofigilis DSM 7299]
gi|296097288|gb|ADG93238.1| protein of unknown function DUF6 transmembrane [Arcobacter
nitrofigilis DSM 7299]
Length = 326
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 89/290 (30%), Gaps = 4/290 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +F A + WGI ++ + R SL + ++Y L K +
Sbjct: 37 YIALFVAMVSWGIAWTASKSATIHSNPEIAAFWRYAISLVSIIPIMLYMKISLKTDKVGI 96
Query: 86 KNPKAVGM---LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
G+ +T L + G Y F+YF++ + S+
Sbjct: 97 FYMIIAGLLSAGFNYSTFLGLSHGQAGYGGTIMTSLTPIFTYFLSILFLKTKISLNQAIA 156
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L+ +L+ + + + + + A W+ K + F+ +
Sbjct: 157 LSLGIFATIILLKIPSVGIGFLNYNTGFFVLSAFCWALMTILSKKSSSRTDPLFYTLVIF 216
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ Y + + F +F +F I +
Sbjct: 217 FITTIVNYFIALPYHPFNIFSYDETFWWSIAYVGLFSGTFSTTLFFIAIGKIGADKTAAF 276
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ P + +++S + + I + + ++A+V+Y I G K
Sbjct: 277 MFIIPAVAMIASNIVYHEKILFSTVLGCILSLVAVVLYNRKEKIKLGVKK 326
>gi|294677669|ref|YP_003578284.1| hypothetical protein RCAP_rcc02147 [Rhodobacter capsulatus SB 1003]
gi|294476489|gb|ADE85877.1| protein of unknown function DUF6, transmembrane [Rhodobacter
capsulatus SB 1003]
Length = 318
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 86/287 (29%), Gaps = 10/287 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G A +L+G+ + + + V+ R + + F G L+ L
Sbjct: 35 QGIGLFLLALMLFGLMDVAAKKLAQDYPPAMVVWARF---AVNLALVTLLFRGKLATLV- 90
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ G+ F A+ + ++PV+ ++FL E+L
Sbjct: 91 ---RSQQPGLQFLRGCFQMGTVALFFIAIRYIGLADAAALGALSPVLITLGAALFLGEKL 147
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+II + LI+ G ++ A + A + F +
Sbjct: 148 GAGRIIGIVAAFTGALIVLRP-GAGVMHPAAILALLACFTYAGGALLTRVVRFDSTATSV 206
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A+ + + + D + G L + ++A+ ++
Sbjct: 207 LWSAMVGTGLSSLALPFFWQEVAPIDLPLFLAVGALGAVGQAALIVAFRKAEAGSIAPFG 266
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y+ + + Q D I +V+ A VY+ +
Sbjct: 267 YSDLIFSGLWGWAFFAQLPDFYTVIG-ALVIAAAGVYVWSRERAEAR 312
>gi|284048189|ref|YP_003398528.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
gi|283952410|gb|ADB47213.1| protein of unknown function DUF6 transmembrane [Acidaminococcus
fermentans DSM 20731]
Length = 309
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/309 (11%), Positives = 83/309 (26%), Gaps = 28/309 (9%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
G +FV L+G +F + +++ R L + L
Sbjct: 3 KGYIFVLVTAFLFGTMETALKFFGGMFHPIQITFLRFLIGGLVLMPMAF---SALKKKNV 59
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L L + V + A++ + + + PV V L E +
Sbjct: 60 QLNGQDLKFFLFSGFLGVVVSMILYQMAIVYGKASVNGVIFSCNPVFVVLFAYFLLGEPI 119
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW-----SAYCFARKTIPVGSSEGFFI 198
+ L I + + ++ + + L+I + A G +
Sbjct: 120 DKLTIFSLMASFAGIVCIVNPVNMTGSQLSIILILLSAMTFALYGIAGRKHAQRYGGIAM 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFF-------------------LGNIPDTLFLIGYGLL 239
+L +V G S L +
Sbjct: 180 TSLSFLCGSLEMLVLIGISTFAPVRDLMLSLGLKVFTDIPILGGLTAAHIPPLAYIAVGV 239
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + ++ +T + Y P+L + ++ +PI + +++ +
Sbjct: 240 TGLGYASYFLAMEYTDPATASLAFYIKPILTAFMAWLVIDEPITVNMIVGIALILFGSCL 299
Query: 300 YLLPTVINS 308
++ +
Sbjct: 300 SIISKRKKA 308
>gi|218463381|ref|ZP_03503472.1| probable transporter protein [Rhizobium etli Kim 5]
Length = 302
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/308 (12%), Positives = 92/308 (29%), Gaps = 19/308 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
++ G + A + +++ E +S +V +R + + +V
Sbjct: 1 MSEPHQNSLQGMAIMSGAMFILPTMDAIAKYMATFEAMSPGQVTFYRFFFQIACTLPILV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G + + K M + + F A+ YFV P +
Sbjct: 61 ALFGFRAF------SAKRPWMNILRGVLHGAASLLFFVAVKYMPLADVFAIYFVEPFMLT 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ +VFL E++ + +A + +I+ S A+ A+ F+ +
Sbjct: 115 AMSAVFLGEKVGWRRWMAIAVGFGGAMIVIQPSYEIFGLKALLPVACAFLFSLYLFLNRA 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFF----------LGNIPDTLFLIGYGLLNSF 242
+ + + + V+ + + L+ G ++ +
Sbjct: 175 IGEADSPLTMQTMAGIGGTVFMAAALLAGSGAGSEDFAISLPASGLGLALLLALGSISGY 234
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + A LS + +Y + V + + I I+V + + +
Sbjct: 235 AHMLVVRAFRLAPLSLLAPFQYFEIISATVLGYALFNDFPSFSKWIGIFIIVASGLFIIW 294
Query: 303 PTVINSGK 310
+
Sbjct: 295 RERQQHNR 302
>gi|163741130|ref|ZP_02148522.1| hypothetical protein RG210_16760 [Phaeobacter gallaeciensis 2.10]
gi|161385483|gb|EDQ09860.1| hypothetical protein RG210_16760 [Phaeobacter gallaeciensis 2.10]
Length = 300
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 98/291 (33%), Gaps = 9/291 (3%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+++ A + + + + + E++++R L V + + +D L
Sbjct: 13 IWMIGAIVSFSAMAIAGREAGLSLDTFEIMTYRSAVGLVIVVAVLTATGSWRQVRRDRLG 72
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
F+ L + +A+ F +P+ + L + L E L
Sbjct: 73 LHLIRNAAHFTGQNL------WFFAVTLIPLAQVFALEFTSPLWVLMLSPLLLGEALTKP 126
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+++AA L + +LI+ S L IA SA FA + +L
Sbjct: 127 RVLAAALGFIGILIVARPSPESLNLGVIAAASSAVFFALTIMFTKRLTRHEPISSILLWL 186
Query: 207 ALFYVVWNGFSGGE--HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
L + + G + N L+L+ G + + A + V +++
Sbjct: 187 TLMQLGMGLATSGWDGVIAIPNAATALWLLVIGCAGLTAHFCMTKALAIAPATVVVPIDF 246
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
+ V+ + I + ++ + ++ A + +L + ++
Sbjct: 247 ARLPTIAVAGMLIYGEALNLWILLGAAVIFCANYINILDAAGRLRAHSEQR 297
>gi|254368992|ref|ZP_04985005.1| 10 TMS drug/metabolite exporter protein [Francisella tularensis
subsp. holarctica FSC022]
gi|157121913|gb|EDO66083.1| 10 TMS drug/metabolite exporter protein [Francisella tularensis
subsp. holarctica FSC022]
Length = 294
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/299 (13%), Positives = 94/299 (31%), Gaps = 20/299 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
L +F I WG+T + L +S ++ R+ S I+
Sbjct: 4 QRKAILALFIVTIFWGVTFPLIKISLAYISPGLFVAIRLSLSCLLFLPLILRAK------ 57
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ + ++ + + F + L T ++F ++ V+ F+GS+F +
Sbjct: 58 --FNNKLYLLKVGAIFGSLEGLSFYFQTHGLYTVSSSQSAFLTALSVVMIPFIGSLFKVD 115
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF----------ARKTIPVG 191
RL IIA+ + ++ + ++ S + A + RK
Sbjct: 116 RLTIYDIIASCVSLIGIYALSGASFDNFTIGYLWSVLCALMYAVSVVYLSYETRKDHRSE 175
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + + + + S + I + + +Y
Sbjct: 176 AFRDLRLLIILQIAFGIPLPLITDISSFMYLHFNYILIIALTFCAISTITCYYLQNTY-Q 234
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
K +S V ++ P+ + I + I I +++ + + + K
Sbjct: 235 KHLSMSQVAVIFSFEPIFATIFGKLINNEKIYLSTIIGGTLILTSYFIIEIGNRKRQSK 293
>gi|254291827|ref|ZP_04962611.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|150422263|gb|EDN14226.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 82/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICGAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACTLSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|20089664|ref|NP_615739.1| integral membrane protein [Methanosarcina acetivorans C2A]
gi|19914590|gb|AAM04219.1| integral membrane protein [Methanosarcina acetivorans C2A]
Length = 324
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 87/290 (30%), Gaps = 14/290 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
+ L V + + + L+ + +++ VI +R+ + L +F IV L
Sbjct: 4 ESKKAHLAVITGCVFYSMNGLFISNIHDMAISPVIFYRLFFGLLFLFIYIVARGKISDLR 63
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
K + + A +L + L + + P+ + L E
Sbjct: 64 LKKKKKNLLLQGTLVVACMLL-----YFTCLKITCVSIAILLQYTAPIYVMLASPFLLNE 118
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
++ I A + I + ++ G + V ++ +++
Sbjct: 119 KIGKESIAALFIAITGVFLIIRPEGGLSGIELTGTYMLGMVSGLLSGVVFAALILNVKVL 178
Query: 202 V---------LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ + F+ + + + F G+
Sbjct: 179 KTEYPELAIVFWPMGIALLLLSPFAFEVSPPVLYSNLKILAAFGIVSIGFGEIFTVLGLA 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
K T I+ P+ + + +L + + +++ + ++ L
Sbjct: 239 NIKAQTGSILSLIEPVSGVFFDIAVLGIALSSETLAGCALIIGSALIISL 288
>gi|24372708|ref|NP_716750.1| integral membrane domain-containing protein [Shewanella oneidensis
MR-1]
gi|24346770|gb|AAN54195.1|AE015557_1 integral membrane domain protein [Shewanella oneidensis MR-1]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 95/298 (31%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ ++ A LW + L S L+++ VL S+ + + + L
Sbjct: 6 LAYVYGMAAVFLWSTVATAFKIALGFYSPLQLVFVAVLTSIVTLGAILTWQKKLPLLKVQ 65
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
L+ P + +++ A + V+ L + LK+ L
Sbjct: 66 LLRRPTFYLVT--GLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLLKQHL 123
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFF 197
+IAAL+ + I+ + +A+T + +
Sbjct: 124 RKSDMIAALIAYSGVFIIATGGDVSGFRFDSPLGIGLALTSTLLWCLYWIVNTKDQGDPV 183
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA-KL 256
+ + + + L ++ + F ++ +K A +
Sbjct: 184 VSLLLSFLIGLPFITITLLLTDALPSFSIKAVMAGMYVGLFEMGITFVLWLMALKTATRT 243
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ + + + +P++ I +IL++ I T I G ++ M++ L K K
Sbjct: 244 ANISTLVFLSPVMSIGFIAWILQETIATATYIGLGFILAGMMLQQLFPRYLERKTKLN 301
>gi|332289324|ref|YP_004420176.1| conserved hypothetical protein, EamA-like transporter family
[Gallibacterium anatis UMN179]
gi|330432220|gb|AEC17279.1| conserved hypothetical protein, EamA-like transporter family
[Gallibacterium anatis UMN179]
Length = 304
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/305 (10%), Positives = 107/305 (35%), Gaps = 17/305 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + +++G+ L + V + R+L + F F
Sbjct: 2 QKQKLAIPGILIGCVVFGLGSLIVAHV-PVGAYAIAFWRLLIAAIIFFILAKLFKQPFP- 59
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K+ + + + + LA GF+ ++ +++ + +G + K
Sbjct: 60 -----KSKQTIRYGLLAGVFLAFDLGFWHESVYAVGPGISTLLNSLQIFFLAAIGFFYFK 114
Query: 141 ERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYCFARKTIPV 190
E+ + +Q+ + +L ++ + ++T + + ++ + S +
Sbjct: 115 EKQSIVQLFSLVLAVIGVYLITGSEFQHNDNALWGFVSGVVSSLLLALSMVYIRKTHEAE 174
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + + + F+ + + + ++ F + + +Y
Sbjct: 175 PCAIFPLMLLVSVGGILALIIPSLLFNFDNLYPTTALDWFWVFVYGAVMQCFAWGMIAYS 234
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ L+ G++ + P+ +V +L +PI+ ++ I + A+ + + + K
Sbjct: 235 VPLLSLAVTGLLLLSEPIAALVIDYSVLNKPINLIQWCGAAITMFAIYLGSVSSQPKKSK 294
Query: 311 NKTKK 315
++ K
Sbjct: 295 IRSLK 299
>gi|324111433|gb|EGC05414.1| integral membrane protein [Escherichia fergusonii B253]
gi|325499316|gb|EGC97175.1| putative transport protein YijE [Escherichia fergusonii ECD227]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 89/278 (32%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 72 TLAIALLQTCGMIGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + LL++ + S+ A SA R + + +
Sbjct: 132 IAAVGLLLVLQPWQLDFSSMKSAILAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVAWLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|289522827|ref|ZP_06439681.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503851|gb|EFD25015.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 321
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 15/310 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIV 72
++ ++ ++ + + ILWG T +L +S L ++S R L + ++
Sbjct: 1 MTVTSSRKTVILADMALLITAILWGSGFGTTNWLLGFMSPLWLLSVRFLLTAGILYLLF- 59
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ +L N + + + +LA + I LL SF V+
Sbjct: 60 -------HSRLSLLNKQDIILGCLLGALLAGTFVAHIIGLLFTTPGKQSFITGSYVVMVP 112
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L ++F ++ + + + A+L LL+M G+ A A + VG+
Sbjct: 113 ILYALFYRKMPSPVATVGAVLATAGLLVMGFTPGMSFNLGDALSLLLALGCALHVLFVGN 172
Query: 193 SE------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
A L + + F +
Sbjct: 173 LSRRIDPAALTFLQMASASVILTVSASLIEPFPSFQAVPLKAWLGIFYVVLFVTVIPFLM 232
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ + + ++ V +V I ++ ++ + IV +V+ L I
Sbjct: 233 QTIAQRYSPEVHAAVLLSLESPSGYVFAVLIGEELVNAQVVLGGMIVFAGVVITELEAFI 292
Query: 307 NSGKNKTKKS 316
+ +
Sbjct: 293 LKRFVRPSNA 302
>gi|229095565|ref|ZP_04226550.1| hypothetical protein bcere0020_8200 [Bacillus cereus Rock3-29]
gi|228687867|gb|EEL41760.1| hypothetical protein bcere0020_8200 [Bacillus cereus Rock3-29]
Length = 295
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 87/277 (31%), Gaps = 5/277 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + WG + L T+ LE + +I+ R + + + ++++ + T+K
Sbjct: 9 LMLLLVTFFWGASILLTKVGLEGIEEYNLIALRFIIA--FLLSGLIFYKHLFKVDFKTVK 66
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++F I A + + + +S ++++
Sbjct: 67 YAFILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVG 124
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I+ + I L L G + ++ + A + + L
Sbjct: 125 IILTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVIQLGFV 184
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
LF ++++ + L + F + + + G++
Sbjct: 185 GLFSLIFSFIIETPKLPSTIDSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLE 244
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
P+ + + + + ++++++++ L
Sbjct: 245 PVFSAGFAFVFTGETLTGKGYLGATLILLSVLIAELD 281
>gi|159896819|ref|YP_001543066.1| hypothetical protein Haur_0286 [Herpetosiphon aurantiacus ATCC
23779]
gi|159889858|gb|ABX02938.1| protein of unknown function DUF6 transmembrane [Herpetosiphon
aurantiacus ATCC 23779]
Length = 293
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/290 (17%), Positives = 94/290 (32%), Gaps = 16/290 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ILWG T + T +L L V R + + L
Sbjct: 1 MLLTAIAPILWGTTYVITTEWLPANRPLLVGVMR----ALPIGLIFLALGRQLPKGIWWW 56
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ A + + A G + + + P I F G V LKER+
Sbjct: 57 RSLVL------GALNIGFFFPLLFIAAYRLPGGIAATLGALQPFIVAFWGWVVLKERVTS 110
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA-----RKTIPVGSSEGFFIEM 200
++ A L +L + +M L+ L + + +
Sbjct: 111 RLLLMAGLGVLGVGMMLLNPQAQLDAWGMLAAFGGAMLYGVGITLNKHWGRPVPLLTYTA 170
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + L V G F + + + + GI+R K ST+
Sbjct: 171 WQLVVGGLMIVPIALLIEGLPPAFTTSNWLGFGLIGLVNTGVAYLFWFRGIERLKTSTMS 230
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ +P+ V +L Q + ++ + +V+ ++V+ LP+ + +
Sbjct: 231 FLILLSPVSATVLGWLVLDQRLSWLQMLGALVVLASIVLSQLPSRQPTPR 280
>gi|152995683|ref|YP_001340518.1| hypothetical protein Mmwyl1_1657 [Marinomonas sp. MWYL1]
gi|150836607|gb|ABR70583.1| protein of unknown function DUF6 transmembrane [Marinomonas sp.
MWYL1]
Length = 307
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/314 (14%), Positives = 103/314 (32%), Gaps = 27/314 (8%)
Query: 10 YSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVF 68
S+ L+ + + L + WG + T+ L VL I R + L +
Sbjct: 2 ASQTLTNPSVFSKLPIAELSLLFTAFFWGTSYGITKDALLYTGVLAFIIIR--FGLTSLI 59
Query: 69 FAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
A ++ L K V + IL + IY + +F +
Sbjct: 60 LAPIFIKELRKGLAKDWK------FAVPTGGILLCIFLAEIYGVFHTTASKAAFLISLCV 113
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------------- 174
+I+ + S+ ++ + ++ ALL + + ++T
Sbjct: 114 LITPLVESIADRKLPSRSIVLFALLSVFGVFLLTTQGIDQQTPNIFSFNLNKGDYSILLA 173
Query: 175 ----AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDT 230
A K + I+ ++ + AL + + + F T
Sbjct: 174 ALLRACMVVTTKILLKDRVLSPLSTTSIQANIVTLGALLIFIVSNNPIEQLFPTDFAFWT 233
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
+ F F ++G+K S V ++ + P + + + L + ++TV+ I
Sbjct: 234 IIFYLVIFCTIFAFFAQNFGVKHTTPSRVALLTGSEPAFGAIFAYYWLGESLNTVQMIGG 293
Query: 291 GIVVIAMVVYLLPT 304
+++A ++ L
Sbjct: 294 ICILLATIMATLRK 307
>gi|238797431|ref|ZP_04640930.1| hypothetical protein ymoll0001_13760 [Yersinia mollaretii ATCC
43969]
gi|238718702|gb|EEQ10519.1| hypothetical protein ymoll0001_13760 [Yersinia mollaretii ATCC
43969]
Length = 297
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 95/299 (31%), Gaps = 13/299 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A I+W I + ++ + + +R + + F + +
Sbjct: 3 VLFPLFAVIIWSINAVVSKVSATAIDPAAISFYRWI----LALLTLTPFLLLGVIRNWSA 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+++ + ++ YA + + P+++V + V L+
Sbjct: 59 IRIYWWKLMILGLLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTV 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ ++L + L+ + GI L + ++Y + +
Sbjct: 119 GIALGSVLSLGGLVWLVSAGNPAELLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F L L L + ++ +G+ R +
Sbjct: 179 WQSLYMQIAFGVLLLLPNFLLAPDVQLTAQNIPLVLFAGIPASIIAPYLWIHGVMRLGAN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
T I P+ + +V L + + + I GI + +V+ + K +KS
Sbjct: 239 TASIFMNLTPVFTAIIAVTFLHEQLHSYHLIGGGITLAGVVLAQRLRMPLRRKATQQKS 297
>gi|313673280|ref|YP_004051391.1| hypothetical protein Calni_1320 [Calditerrivibrio nitroreducens DSM
19672]
gi|312940036|gb|ADR19228.1| protein of unknown function DUF6 transmembrane [Calditerrivibrio
nitroreducens DSM 19672]
Length = 290
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 85/286 (29%), Gaps = 4/286 (1%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS-L 80
++ G++ V A +LWG T VS + S R++ + +
Sbjct: 5 SLKGSILVILAGVLWGTTGTSQGLAPVGVSSSVIGSMRLIIAGVFFSILLFLRKDYPKVN 64
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT--SFSYFVTPVISVFLGSVF 138
L VG L L+ +G I + S +
Sbjct: 65 LSKWDLVILLVGTLSVVFYQLSFFYGVRISGVAVGTVIGIGSSPLWGGLLGYLFLGEKPA 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L+ I L+ + + I + L + ++ ++ +
Sbjct: 125 KVWYLSTSLAILGLIFLSFIDISSFQINFTGGFLMLIAGFTYAVYSLCAKKLMKKFHANF 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
M V + ++ F + L + + +FS G+ +S
Sbjct: 185 VMAVYFMVGGILMIPILFMNDMSWLFSLRGSILMIHLGIFATFLAYILFSRGLMLVPVSK 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + PL + + +L + + + I ++ ++++ +
Sbjct: 245 ATTLSLSEPLTASILGITVLGERVTMMNMIGIFLIFTSLLLLSRKS 290
>gi|254461264|ref|ZP_05074680.1| transporter, dme family [Rhodobacterales bacterium HTCC2083]
gi|206677853|gb|EDZ42340.1| transporter, dme family [Rhodobacteraceae bacterium HTCC2083]
Length = 315
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/312 (14%), Positives = 106/312 (33%), Gaps = 16/312 (5%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVY 73
S + + G + + + + + + V V ++ + R + + I+
Sbjct: 6 SSAPPTDRILSGVVLMLGFCLTAPLLDVAAKLASDSVPVGQITAARFVIQCVLMAPFIIT 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ L + + A L V FI A+ FV P I +
Sbjct: 66 INLSLHVARQQWLALLLR------AVSLCVATFCFITAIRVMPLADALAIVFVAPFIVLL 119
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT------ 187
+G +L E + ++ AA++ + +L + S + A+ +A FA
Sbjct: 120 VGKFYLGEEVGLRRVGAAVVGFVGVLFVIQPSFAVFGATALFPLGTAVAFAFYILVTRGL 179
Query: 188 ---IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
I S + + + L L + S L+L+G G +
Sbjct: 180 SQKIHPVSMQFYTGLLASLMCMPLMILAQGSGSELFDPVWPVGIAWLWLLGVGFFATLSH 239
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ +Y + A + + ++Y + V + + + I I++ + + +
Sbjct: 240 LMMTYALSLAPSTALAPLQYLELPVATVFGYLVFHDFPNALSLIGIAIIMGSGLYMIHRE 299
Query: 305 VINSGKNKTKKS 316
+ + K+ T+++
Sbjct: 300 RVTARKSITERA 311
>gi|327440653|dbj|BAK17018.1| permease of the drug/metabolite transporter superfamily
[Solibacillus silvestris StLB046]
Length = 297
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 95/291 (32%), Gaps = 11/291 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+ ++G +T + +E++ R + + + + G K N V
Sbjct: 11 ISMAIFGSIGFFTTQ-TGLPAVELVFVRCICATIFLGGLWLITGGH----KTEDWNRSEV 65
Query: 92 GMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAA 151
+ L ++W F A + Y + P+ + LGSVFL E++ I A
Sbjct: 66 MKTIVCGIFLVLNWVFLFKAFEVMSISVAISIYNLAPIFVLILGSVFLAEKMGIRSICAT 125
Query: 152 LLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI------EMCVLAI 205
+ +++ +S + + + + I + +
Sbjct: 126 AICFFGSILIIGIESFTSVSQFMNSGFIWALLSAICYALTMFTSKTIHGMSSYALTYIQT 185
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
++ L N L + FV+ +F ++ V ++ +
Sbjct: 186 ITGIILLLPFCDFAAFEGLTNTNWLYILGTGLIHTGFVYYLFFDSVRDLPTVIVSVLVFV 245
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P++ I+ +L D ++ + ++ +++ + K KT S
Sbjct: 246 DPVVAILLDALLLSFRPDLLQVLGIVLIFGSILYTVFYPKQTINKVKTSSS 296
>gi|163760857|ref|ZP_02167936.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
DFL-43]
gi|162281901|gb|EDQ32193.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
DFL-43]
Length = 289
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/276 (9%), Positives = 75/276 (27%), Gaps = 5/276 (1%)
Query: 29 FVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+ A ++W + + + + + + + RV + ++ +
Sbjct: 1 MMVLAAMIWASGFVAIRIAVPETGPVWLAAIRVGLGFLVLLPYALWRGMTWPQTRAQWLL 60
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS--FSYFVTPVISVFLGSVFLKERLNH 145
+ ML + V W + + F V ++ ++
Sbjct: 61 IVGMAMLNVVLPFVLVSWSGLTLDASVMALLMGTGPFLALVGSHFLTDDDRFTKRKLISV 120
Query: 146 LQIIAALLIILSLLIMTL--HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
L A +++++ + +A + S + + +
Sbjct: 121 LLGFAGIVVLVGPSAFAGLADGSFQAKLVMLAASCSYVMAGLMIRRITMPPVRLACLALA 180
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
A + + G L T + + + I S +
Sbjct: 181 IGAAALFPLAFFIEGTPKTGLSVPAVTALIYLGLFPTGIAYILRFNLINTIGYSRFSLTV 240
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
P+ + + +L +PI + G+V+ + V
Sbjct: 241 NMIPVFGMALGILLLGEPITLNGMVALGLVLSGLYV 276
>gi|317419966|emb|CBN82002.1| Transmembrane protein 22 [Dicentrarchus labrax]
Length = 416
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 92/299 (30%), Gaps = 22/299 (7%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+ +F A + G L T+ V LE++ R + + +V++
Sbjct: 109 MALFGAAVAHGCVALITRLAADRSKVPSLELLFIRSVIQ--VLSILVVFYYHEAPFGPKG 166
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + +I + F I + T V S L + L ERL
Sbjct: 167 YRLRLFFYGVCNVISITCAYTSFAIVPPSNGTIMWRA----STTVFSAVLAFLLLDERLG 222
Query: 145 HLQIIAALLIILSLLIMTLHS-------------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ ++ + + L ++ + + ++ + +A +
Sbjct: 223 YTDVVTVVGSVFGLCLVMVPNVADEEKSRLGFWKEAFGYTMTVMAGLTAALSMIVYRAIK 282
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ + + F E + +LIG + ++ F Y +
Sbjct: 283 ERVSMWTALFTFGWTGTVWGASTMFIMQEPIIPLDGETWGYLIGICICSTVAFLGVYYAL 342
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + V +++ ++ + + +L+ I +++I++ + +
Sbjct: 343 NKFHPALVSTVQHLEIVVAMFLQLIVLRMIPSVYDVIGGLVIMISVFTLTGVKLYRVSR 401
>gi|298292082|ref|YP_003694021.1| hypothetical protein Snov_2106 [Starkeya novella DSM 506]
gi|296928593|gb|ADH89402.1| protein of unknown function DUF6 transmembrane [Starkeya novella
DSM 506]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 99/302 (32%), Gaps = 12/302 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFS 75
+ A + + G A L+ I + + + + EV+ R ++L + + + +
Sbjct: 3 QGAIMNALKGIALQIGATFLFTIMQALVRIVSERIPTGEVVFSRSFFALFPLLAMLAWRN 62
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ ++ + TI AL + F P+++V L
Sbjct: 63 EISAAVRTAH-----PFGHILRGTIGVTSMSLGFSALALIPLADATAISFTAPLLTVVLA 117
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIP 189
++ L+E + + A + + +++M + ++A A I
Sbjct: 118 ALVLREHVQTYRWAAVSVGLCGVVLMLWPHMSGEFDTTDHVLGAVLALFAAGFTAGAMIQ 177
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
V ++ V + G + + D + L+ GLL + +
Sbjct: 178 VRRLTETETTPAIVFYFQALGAVAGLATAGWGWVIPGFWDAVLLLTIGLLGGVGQILLTE 237
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ A S V Y+A L ++ + + + + G+V+ A + +
Sbjct: 238 SYRYAPASVVAPFAYSAMLWSLLLGFVLFAEVPPVLVVVGAGVVIGAGMYVIWRERRPGA 297
Query: 310 KN 311
+
Sbjct: 298 RR 299
>gi|152994372|ref|YP_001339207.1| hypothetical protein Mmwyl1_0334 [Marinomonas sp. MWYL1]
gi|150835296|gb|ABR69272.1| protein of unknown function DUF6 transmembrane [Marinomonas sp.
MWYL1]
Length = 313
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/306 (8%), Positives = 90/306 (29%), Gaps = 21/306 (6%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + WG + L +V L ++ R + +F + + + L
Sbjct: 10 VLLLLLCTFFWGACFPVGKHALGEVHALTLVIWRFAIAAVCLFIYAKWKNMPMPSLTA-- 67
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + S + L + ++P+ + +GS+ ++
Sbjct: 68 --KQWAWAISVSIIGVGGLNLGLFTGLAQTDASNGALIMALSPLATSLIGSLLQRKLPAR 125
Query: 146 LQIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
+ + ++ + +L++ + + + + +
Sbjct: 126 GAVFSLVVCLSGVLLVLTNGELKRLLGFEFNHGDQMIFLGMLCWSLYTYLTQGVSRWMPM 185
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHF-----FLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ + + FS H + L + ++ G
Sbjct: 186 IPYTLVGMLSGLGVISLVTAFSAEVHPLQESLAISGYVLGDLLFIGVFGTVGGYLLWISG 245
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+K+ + + P+ +++ F Q + +++ + IV+ +++ +
Sbjct: 246 VKQLGAANASLFFNFVPVFAALTA-FAYGQTVTSLQLLGVAIVIAGLLLPRIVKWQQQRF 304
Query: 311 NKTKKS 316
N+ + +
Sbjct: 305 NRQEAA 310
>gi|157371529|ref|YP_001479518.1| hypothetical protein Spro_3292 [Serratia proteamaculans 568]
gi|157323293|gb|ABV42390.1| protein of unknown function DUF6 transmembrane [Serratia
proteamaculans 568]
Length = 287
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 91/281 (32%), Gaps = 12/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L++ A + + + V ++I +R + ++ V I +K+
Sbjct: 4 LWMVVASGFFALMGASIKLASAKVGFFDIIFYRSVINVLIVAALI--------QVKNLGF 55
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +G+ + A I Y+L+ + + P+ + V K +L
Sbjct: 56 RTRHLGLHMKRAAIGNAAMYCGFYSLIHLPIATATTLGYTNPIFQSAIAFVTSKGQLTGK 115
Query: 147 QIIAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ + LL + +L++ +G +L ++ A + G V
Sbjct: 116 LLFSVLLGFIGILVLLRPDTPNGEYAATLIGLLSGLLTALAYFNVGKLVRTGEPELRVVF 175
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +V + F + L + G+ S + V I+
Sbjct: 176 YFSLVGTIVGAVMTTVVGFSTLDSAMILCVCAIGVFGSLGQITMTRAYGSGNAVIVSILS 235
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
Y+ + + + + + + +++++ + +L
Sbjct: 236 YSTIIFSTLLGYLLFGEKLSYIAAGGMALIILSGALAILKR 276
>gi|21220762|ref|NP_626541.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|7619748|emb|CAB88171.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length = 326
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 82/284 (28%), Gaps = 9/284 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G ++WG+ L + +++VS V+ R + + L +
Sbjct: 2 TARGWFLFSLMGVVWGVPYLMIKVAVDEVSPSGVVFARCALGAALLLPFALRKGDLLGTV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K A ++ + + T V V + +E
Sbjct: 62 RRRWKPMLAFAVIEIIGPWWTLTDAERHLSSSTAGL----LIAGVPIVAVLLARFFGAEE 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R+ +I L + + ++T+ + ++A + + +
Sbjct: 118 RVGARRITGLGLGLAGVAVLTVPHLTGGDARSLAEVLVTVVGYATAPLIAARHLKDVPTL 177
Query: 202 VLAIPALFYVVWNG----FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L P L F + + F F IK +
Sbjct: 178 QLITPCLTLAAVVYAPAAFLTRPATLPSGEALAALAGLGLVCTAIAFVAFLELIKEVGPT 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G++ Y P + + + +L + + + F +++ V+
Sbjct: 238 RAGVITYVNPAVAVAAGALLLDEELTLGIGVAFTLILAGSVLAT 281
>gi|323492164|ref|ZP_08097322.1| hypothetical protein VIBR0546_03260 [Vibrio brasiliensis LMG 20546]
gi|323313477|gb|EGA66583.1| hypothetical protein VIBR0546_03260 [Vibrio brasiliensis LMG 20546]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 102/280 (36%), Gaps = 20/280 (7%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
I WG + T+ L SVL IS R + + ++ K
Sbjct: 26 AIFWGTSYGLTKSALVFTSVLVFISIRFSITFLCMLPVVI--------RDFRQGLSKDWQ 77
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + + IL+ + ++ + +F ++ +++ F + K+R+++ + L
Sbjct: 78 IALPTGLILSAIFFCEVFGVSQTSASNAAFLISLSVILTAFAELIINKKRVSNTLWLLTL 137
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI-----------PVGSSEGFFIEMC 201
++ +L++T G L A R + + +S ++
Sbjct: 138 CSVVGVLLLTSDEGFELSLNGGDYFILAAALLRALMVTLTKRFTEGKQITTSTLTALQSL 197
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V+A A+ V + F F + +Y ++R + V +
Sbjct: 198 VVATVAIICAVTYLPASEFVIPTSVEFWLTVAYLVLFCTLFAFYVQNYAVRRTSPTRVSL 257
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + PL + ++ L++ + T++ + +++ +++V
Sbjct: 258 LMGSEPLFGAIFAMIWLQESLTTLQIVGGLLILFSVIVTS 297
>gi|312278938|gb|ADQ63595.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Streptococcus thermophilus ND03]
Length = 304
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/304 (14%), Positives = 105/304 (34%), Gaps = 10/304 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ G+L V A I WG + + Q+L V+V + S R++ + + ++ +F
Sbjct: 2 SKQLKGSLMVLVAGIAWGFSGVSGQYLMAHGVNVNLLTSLRLILAGILLTASV-FFRQSD 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ V + +F+ L ++ ++ A+ + +VTPV+ +
Sbjct: 61 KLVSALKDKKTLVSIALFALFGLVLNQYAYLSAIQHTNAGTATVLQYVTPVLILTFVCAK 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVG 191
+ +++A ++ I I+ H L + + +
Sbjct: 121 NRRFPMVSELVAIIMAIAGTFIIATHGQVTELAITPIGLFWGLFSAVTYALYILLPAKAI 180
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
G I + + + + L + F + IF G
Sbjct: 181 EKWGSLIVIGLGMLLGGLVFPIAIQAWKYKLPLTGGNLLALFGLVFIGTLFAYTIFLKGT 240
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ ++ +V I+ + + ++V+A+++ L ++ K
Sbjct: 241 AMVGAVKGSLLASVEPVASVILTVLIMGDRFFAIDVVGMILIVLAVIIISLKNLVALTKE 300
Query: 312 KTKK 315
K ++
Sbjct: 301 KIQR 304
>gi|310829243|ref|YP_003961600.1| hypothetical protein ELI_3681 [Eubacterium limosum KIST612]
gi|308740977|gb|ADO38637.1| hypothetical protein ELI_3681 [Eubacterium limosum KIST612]
Length = 294
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/281 (10%), Positives = 97/281 (34%), Gaps = 2/281 (0%)
Query: 25 MGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G + CA G+ P++T+ + ++ +V+ R +W ++ + +
Sbjct: 3 KGVVAAICAAFSAGMIPIFTKLMMNAGLTSAQVLFFRYMWVFIMAGGWMMIRKKSFHITR 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L + + + F + ++ FV ++++ K +
Sbjct: 63 KQLCALFFFTVAGYGGATFLLASSFNFLPVGLATMLYFTYPMFVMLIMTLLFKEKPTKIK 122
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L + ++ L ++ + +L++ + + Y + + + + I +
Sbjct: 123 TASLLLAVFGILWLMNFDFSIVNIGSVLAVGAGLAYGVYLVGIRKSSMKNMDNMAIVFYL 182
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
I + + +G F + + + G + FV + ++ IK + ++
Sbjct: 183 AGISCVLFFGQGCLTGTPDFLTIGPLELFYGLILGFITVFVLGVVAFAIKAIGPTKTSLI 242
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ +V + + +P + ++ ++++
Sbjct: 243 ISFEAVVSLVMGILVFSEPYGVNTWVGSILMTLSVIFITRE 283
>gi|298507422|gb|ADI86145.1| membrane protein, putative [Geobacter sulfurreducens KN400]
Length = 321
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 92/298 (30%), Gaps = 19/298 (6%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + + WG+ + + +++ L I+ R S V +V LSL
Sbjct: 10 LAVTLMIILCLTWGLQQVALKATSAEIAPLMQIAIRSGISALLVGIMMVVRGERLSLAGG 69
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
+ AVG L +L T + F Y ++ L ERL
Sbjct: 70 MWRPGLAVGFLFALEYLLVGEGLRH-----TTASHMVIFLYTAPVFAAIGLHLKLRSERL 124
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+Q L +++ G SL++A I L
Sbjct: 125 RPVQWFGIALAFGGIVVSFYGRGGHTASLSVASVIWGDVLGLAAGMAWGMTTVVIRTSRL 184
Query: 204 AIP-------------ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
A + + +F + + +++ F ++ +
Sbjct: 185 AACSATQTLLFQLLGAFILLLPAAAVLDQTYFNPTRLGWACLIFQTLIVSFASFLVWFWL 244
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
++ S +G++ + PL + ++L +P++ +V+ +++ +
Sbjct: 245 LRHYVASRLGVLSFMTPLFGVALGAWLLNEPLERGFLAGALLVLTGIILVSGHGWLRQ 302
>gi|262277049|ref|ZP_06054842.1| transporter [alpha proteobacterium HIMB114]
gi|262224152|gb|EEY74611.1| transporter [alpha proteobacterium HIMB114]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 88/298 (29%), Gaps = 7/298 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L +WG + ++ + L S R+ + ++
Sbjct: 2 NKKLFSLLCALITSFIWGTAFVAQDMGMDHIGPLTFTSARLFLGFLTLLPFLIIIDFKKI 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +L ++A YALL T+ + V F+ +
Sbjct: 62 KQDKHDFKKVFIYLLFI-GFLIAYGNALQQYALLYTDVANTAVFTVLYVVFVPFVSYFYF 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ ++ + +L L +T + + ++A ++ + + F
Sbjct: 121 SKNIHWSVWPSIFTCLLGGLFLTELDNVVVRLGDSIALFNALFWSFHIVFISKLLRIFNY 180
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLI-----GYGLLNSFVFCIFSYGIKRA 254
+A F F + L L + F F + + +
Sbjct: 181 PITIAGLQCLIGSIFTFLPALIFEEVIFSNILLEYKEILYVGILSSGFAFMLQIFSQQNL 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ V I+ + ++ IL Q ++ ++ +++ A++ + + K
Sbjct: 241 SPAPVAIIFSLEGAIAALAGWIILDQFLNEIKIFGIFLIIFAVIFSQIAPLYKKNNIK 298
>gi|254423508|ref|ZP_05037226.1| Integral membrane protein DUF6 [Synechococcus sp. PCC 7335]
gi|196190997|gb|EDX85961.1| Integral membrane protein DUF6 [Synechococcus sp. PCC 7335]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 89/271 (32%), Gaps = 15/271 (5%)
Query: 29 FVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
+L+ + + ++ + L + R + + + +V+ S SL T
Sbjct: 12 LAVLTSLLFAGSFVAGKYTTDEMGPLLITLLRYVVASAFL-AVLVWRSQETSLRLSTASV 70
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+ + + +T + + FF +L ++ PV++ FL +V LKE L
Sbjct: 71 ADKICLCLLGSTGVVGYHFFFFSSLRYTAVANSAIINAFNPVVTGFLAAVILKETLLVRN 130
Query: 148 IIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
I + IL +LI+ + G L+ A+ R S
Sbjct: 131 YIGGTIAILGVLILLTDANLTALLQLQFNRGDLLMLCAVLCWACYSILLRHLGKRYSGLA 190
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + LF ++ L + + + +F+ +R
Sbjct: 191 MSYYGALFGVAQLFLLIPLELKVTGFPTLSLPALLGVVYMGIGASGIGYLLFTISTQRIG 250
Query: 256 LSTVGIMEYT-APLLMIVSSVFILKQPIDTV 285
+ + Y+ P+ + + + +PI
Sbjct: 251 PTKSTSIVYSGVPVWVALLAWLFFAEPITPW 281
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 14/147 (9%), Positives = 40/147 (27%)
Query: 162 TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEH 221
+ ++ S T +G + V + V + +
Sbjct: 6 VWAQSSLAVLTSLLFAGSFVAGKYTTDEMGPLLITLLRYVVASAFLAVLVWRSQETSLRL 65
Query: 222 FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQP 281
+ F ++ ++ I+ P++ + ILK+
Sbjct: 66 STASVADKICLCLLGSTGVVGYHFFFFSSLRYTAVANSAIINAFNPVVTGFLAAVILKET 125
Query: 282 IDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I I ++ +++ L + +
Sbjct: 126 LLVRNYIGGTIAILGVLILLTDANLTA 152
>gi|116623795|ref|YP_825951.1| hypothetical protein Acid_4707 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226957|gb|ABJ85666.1| protein of unknown function DUF6, transmembrane [Candidatus
Solibacter usitatus Ellin6076]
Length = 291
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/281 (8%), Positives = 64/281 (22%), Gaps = 4/281 (1%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
L + A +L+ + ++ ++ S R + + A+ G + +
Sbjct: 9 LQIVAAALLFSTGGAAVKAAS-LTGWQIASFRSGIAAVVLLAALPAARRGWNWRMLPVAV 67
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
A +++F I+ T ++ ++ ++
Sbjct: 68 AYAATLILFVLANRLTTAANAIFLQATAPIYVLLLGPWLLHERVRRSDIFYIAA---VAL 124
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A + + LA+A + G +
Sbjct: 125 GLALFFAGSETAVASAPDPARGNLLALASGITYALMLAGLRWQGKHGEPDAGLKTAVAGN 184
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ + + L + + I+ M P
Sbjct: 185 ALAFLLALPAALPVHGFTASDAGVILYLGLFQVGLAYWCLTRAIRHVPAFEATTMLQLEP 244
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + +++ A +V N
Sbjct: 245 SASPFWTWMAYHESPSFRALAGGILIISATLVNTWRNRRNR 285
>gi|99080770|ref|YP_612924.1| hypothetical protein TM1040_0929 [Ruegeria sp. TM1040]
gi|99037050|gb|ABF63662.1| protein of unknown function DUF6 transmembrane [Ruegeria sp.
TM1040]
Length = 297
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/278 (8%), Positives = 81/278 (29%), Gaps = 8/278 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + G L + A + + + L+ + L + I + +F+ +
Sbjct: 1 MDNVKGILLLLVAMVGFTVEDLFIKQLSGSLSVGQILVFIGLGAGLLFYVALRLQKQRLW 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ ++ + L ++ + + + +T ++FLG
Sbjct: 61 TREAWQSMPVLRALAEGGAAMSFATALALVDISVVAAVFQATPLAITMGAALFLGE---- 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSL---AIAVTWSAYCFARKTIPVGSSEGFF 197
++ + A + + +LI+ + + T + +S
Sbjct: 117 -QVGWRRWSAIFVGFMGVLIIIRPGLDGFEPNALLVLISVFFVAARDLMTRRMPASIPSS 175
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + + + + L G L + + A +
Sbjct: 176 VVSVQAYLAVVVAGGVMLMFTPQTLVAPTSFEWAMLAGGTLFGVIAYYGIVTATRIADAA 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVI 295
+ Y+ + ++ + + D + + G+++
Sbjct: 236 VITPFRYSRLVFSMIGGAIVFSERPDGMTLLGSGLIIA 273
>gi|149180858|ref|ZP_01859360.1| hypothetical protein BSG1_00465 [Bacillus sp. SG-1]
gi|148851377|gb|EDL65525.1| hypothetical protein BSG1_00465 [Bacillus sp. SG-1]
Length = 331
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 80/290 (27%), Gaps = 7/290 (2%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L + + RV+ + V ++ L + +L +
Sbjct: 39 MVIWGFNVSAIKILVTYFPPVMIQGVRVMMAGLAVILFLLVKKSFHKLSRKSLIGIFSAA 98
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ L + G L + + +FL + +
Sbjct: 99 IFGVLGHHLFLAIGLTATTATNAGLILGLVPLSTSVMAMIFLNEKLTITKGFGILAALMG 158
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ ++ + SG+ + L I + I S +M + + ++
Sbjct: 159 VYLIVMNEKGTLSGLSVGDLYILGAVLTQAVSFILIKKLSVSIDSRQMTGMMLFMGSILL 218
Query: 213 WNGFSGGEHFFL------GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ L +++Y I R + I
Sbjct: 219 IAASFFFPANEAVFSLDKPQFVWWTLIGSAILATGLGHMLYNYSIHRLGAGSTSIFINLT 278
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
P IV S L + I + I F +V +++ + + + S
Sbjct: 279 PFFSIVGSSVFLGEQIQSKHWIGFCFIVFGVLLGTGTFKVLMKMRRKQHS 328
>gi|114046466|ref|YP_737016.1| hypothetical protein Shewmr7_0960 [Shewanella sp. MR-7]
gi|113887908|gb|ABI41959.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-7]
Length = 296
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 93/289 (32%), Gaps = 12/289 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A ++W + + + + + +R +++ + ++
Sbjct: 3 YLFPLLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLVLTPFMLKPVWHKRKTIA-- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + +A + ++ +A T + + P++S+FL LK++L
Sbjct: 61 --PLLPKLATLAALGMVLNQSLAYFAAATTTATNMALINSLVPMVSLFLAVPLLKQKLTP 118
Query: 146 LQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
L ++ +L L+ M H G+ L + ++ Y +
Sbjct: 119 LVFGGTVISLLGLVFMLSHGDMANLAIGVTQGDLLLLISAFVYALYGVLLKRWQLPISTW 178
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
E + ++ + + L L + + GI +
Sbjct: 179 ESVYIQGLIAVLMLTPLLFSAPSVAISSQAAPLILYAALGASLIAPWAWINGISKLGAEQ 238
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I P+L + + FIL + + + +V+ +++ + +
Sbjct: 239 TSIFFNLMPILAAILAAFILNETLAVYHYLGGAMVIFGVMLVQVKPKLK 287
>gi|90418986|ref|ZP_01226897.1| permase of the drug/metabolite transporter (DMT) superfamily
[Aurantimonas manganoxydans SI85-9A1]
gi|90337066|gb|EAS50771.1| permase of the drug/metabolite transporter (DMT) superfamily
[Aurantimonas manganoxydans SI85-9A1]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/288 (11%), Positives = 81/288 (28%), Gaps = 16/288 (5%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+ W + + + VS + + R W+L +F A + + +N
Sbjct: 16 ALFWAGNAIAGKLAVGHVSPMLLTLIR--WTLACLFVAPFAWGDVRREWPEIRRN--LPF 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ A F A+ + P+I + + + QII
Sbjct: 72 LFGLGAIGFTCFNAIFYLAVNYTSAINVTIEQSAMPLIVFVANFLLFRTGVTLFQIIGFS 131
Query: 153 LIILSLLIMTLHSG-----------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L ++ + + H L + + + Y A + P +
Sbjct: 132 LTLVGVALTASHGELSALLALDLNRGDALMMLAVLIYGGYTVALRFKPKLHWRSTIFVLA 191
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ A+ + ++ G T L + ++ GI+ + +
Sbjct: 192 LSALVVSVPLAGIEWAMGHTQLPDTSGMTAALYTAIFPSLLAQVLYIRGIELIGPNRANL 251
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ + +V I+ + + V+ +++
Sbjct: 252 FVNLVPIFGAILAVLIIGEELHAYHVAALTFVLGGIMLAERGAARARK 299
>gi|229022499|ref|ZP_04179032.1| hypothetical protein bcere0029_8520 [Bacillus cereus AH1272]
gi|228738812|gb|EEL89275.1| hypothetical protein bcere0029_8520 [Bacillus cereus AH1272]
Length = 295
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/275 (9%), Positives = 86/275 (31%), Gaps = 5/275 (1%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ WG + L T+ LE + +I+ R + + + ++++ + T+K
Sbjct: 11 LLLVTFFWGASILLTKVGLEGIEEYNLIALRFIIA--FLLSGLIFYKHLFKIDFKTVKYA 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ ++F I A + + + +S ++++ I
Sbjct: 69 FILASVLFIVYIFATFGTKYTSVSNAGFLLCLTVIFIPI--LSAIFLKHIPEKKVIVGII 126
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
+ + I L L G + ++ + A + + L L
Sbjct: 127 LTIIGIGLLTLTSEFKIGNGDIFCILSALFYAIHVIITGSVTKHVNSIALGVIQLGFVGL 186
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
F ++++ + L + F + + + G++ P+
Sbjct: 187 FSLIFSFIIETPKLPSTTNSWLIILALSIFCTAVAFIVQVIAQQYTTPTHTGLIFSLEPV 246
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + + + ++++++++ +
Sbjct: 247 FSAGFAFVFTGETLTGKGYLGATLILVSVLIAEVD 281
>gi|149445010|ref|XP_001518500.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 89/298 (29%), Gaps = 10/298 (3%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G + + L+ + L+ + +E V +E+ + R + + + ++Y G K
Sbjct: 10 LGLFYTLLSAFLFSVASLFVKKIEDVHSVEISAFRCAFQMLFILPFLIYKKTGFWGPKGK 69
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
G+L +A IL + + +S + + + L
Sbjct: 70 RGFLFLRGVLGSTAMILLYYAFQVMPLADATVITFSSPVFTSIFAWIFLKEKYSIWDLLF 129
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT----------WSAYCFARKTIPVGSSE 194
+ I +++I + + + A +G S
Sbjct: 130 TIFTITGVVLIARPPFLFGSNTAGMEGNYSNHLKGTLAALGGAIGAALTLVILRKMGKSV 189
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + + + L + F GE D LFLI GL + ++
Sbjct: 190 HYLLTIWYYVVIGLIECILALFVIGEWRLPHCGLDRLFLILIGLFGLGGQIFLTKAVQIE 249
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
+ V IM+ + + V L VV + + S ++
Sbjct: 250 RAGPVAIMKTMDVVFAFILQVLFLNNVPTWWTVGGALCVVASSSGTAIRKWYQSSHSR 307
>gi|89069169|ref|ZP_01156542.1| putative membrane protein [Oceanicola granulosus HTCC2516]
gi|89045342|gb|EAR51408.1| putative membrane protein [Oceanicola granulosus HTCC2516]
Length = 302
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 90/287 (31%), Gaps = 7/287 (2%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+S + ++ +++L + L++ R L + P V I++ +G
Sbjct: 8 SSRHAGRAIAVMCFGVFCLVLSDTASKWLVERYHPLQIQFVRNLIAAPVVGLIILFSAGP 67
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L+ +L +AT + ++ F P+ L
Sbjct: 68 RGLVSARPAIHVGRALLTIAATWSFILSLRYLSLESATA------LIFTAPLFIAALSGP 121
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
LKE + Q +A ++ +L++ + +A C+A I +
Sbjct: 122 LLKEWVPRDQWVAIIVGFTGVLVIARPGAGVFDPATLLPVLAAACYAFIMIGARWIDPRD 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + L + + + D + + L+ + S + A +
Sbjct: 182 NFLTMTFYMTLLPAILCAATLLMEWPERQPGDLVLMAAVALMGTLGIACLSQAFRMASAA 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
TV +YTA L + + I+V + + L+
Sbjct: 242 TVAPFDYTALLWASLMGWLVWGTVPSVWVYAGAAIIVGSGLYLLIHE 288
>gi|251792494|ref|YP_003007220.1| UAA transporter family [Aggregatibacter aphrophilus NJ8700]
gi|247533887|gb|ACS97133.1| UAA transporter family [Aggregatibacter aphrophilus NJ8700]
Length = 287
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 76/289 (26%), Gaps = 9/289 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+SK+ + + + AYI + ++ ++ + E++ R L + ++
Sbjct: 1 MSKKLTATLYQKAIICMVLAYISIALMGVFVKYASDELPSSEILFSRFLIGFIFLLPFMI 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
L LV YA+ + + +
Sbjct: 61 RDGDFKVELSQWP-------FLVMRNLAGIASMLLTFYAIKYLPISIAVLLMNTSALFVP 113
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK-TIPVG 191
L V + + L +IM S I A A I +
Sbjct: 114 LLLFVLRTRTPLKVLACSFLGFAGVSIIMLTDSSKHFELQHIGYALGAAFLAAMAFISLQ 173
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
++ L + + + + + L+ G + +
Sbjct: 174 ELNKHNSPKNIVFYFHLLGSLLLPLFFATQWTIPSTQGFVLLLLVGGFGLVFQLLLTRAF 233
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
K A + + +T + + I ++++++ +
Sbjct: 234 KYAPANVITPFAFTGVIFSSICDWLFWHNVPTLNFWIGSLVIIVSVSLL 282
>gi|238020760|ref|ZP_04601186.1| hypothetical protein GCWU000324_00650 [Kingella oralis ATCC 51147]
gi|237867740|gb|EEP68746.1| hypothetical protein GCWU000324_00650 [Kingella oralis ATCC 51147]
Length = 291
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 85/292 (29%), Gaps = 3/292 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G L++ +L ++ L+++ I R++ + + +
Sbjct: 1 MHHYRGELWLILVTLLAASGWFVSKAALQELPAAGFIGARMVGAALLFLPFALPQLRQWT 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + + V + +
Sbjct: 61 AGQFARAAAVGAAFSGNIFFWIQGVAHSTHFGEGALLLSSSMLLAPVLSWLLFRHRPSPM 120
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+ L+ + + G L + ++ SA F +
Sbjct: 121 LWLSLAISGCGMYLLNAGKSPLQMSLGSGLFA--LSALMSALFFVLNNQFSKGMNALPLT 178
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
LA + ++ HF L +IG ++ + F + ++ K +
Sbjct: 179 TVQLACAGIVCGGYSLAFETWHFPLSAASWMWLIIGIVVITNTRFLLQTHAQKICPIGNA 238
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ P+ ++ SV +L + + + +++ A+++Y LP +
Sbjct: 239 AMIMVLEPVWTLLFSVLLLGEQLSWEKATGGALIIAALLLYRLPLRQWHQRK 290
>gi|254173229|ref|ZP_04879902.1| permease, DMT superfamily [Thermococcus sp. AM4]
gi|214032638|gb|EEB73467.1| permease, DMT superfamily [Thermococcus sp. AM4]
Length = 275
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/271 (9%), Positives = 80/271 (29%), Gaps = 6/271 (2%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
A +LW + L +S L+++ L SL + +YF ++
Sbjct: 6 AIGAVLLWSTVASAFKLSLLYMSPLQLLFWAFLTSLV--LYGALYFRSFRPSRENLRSAY 63
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ + ++ + + + ++ + ++ L +
Sbjct: 64 LGLVLFLYYTVLFSAYDLLPAQEAQALNYTWPLALVLLSVPLLKRKLALKTLFGLFLGFL 123
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
A ++ + + A+ + + A + V +M +
Sbjct: 124 GALIVATRG--RLLSLGFSNPVGDALGLGSALIWAAYWLLNVRDGRRLEEKMFWNFLFGF 181
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
YV + G + + ++ ++ ++ + Y P
Sbjct: 182 TYVSIAVVATGNFAVPPVEGLAGAIYVGLFEMGVTYLLWYRAVES-DVAFASNLAYLVPF 240
Query: 269 LMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
L ++ IL + I+ + ++V +++
Sbjct: 241 LSLLFIALILGERIEPTTVLGLVLIVGGILL 271
>gi|145592763|ref|YP_001157060.1| hypothetical protein Strop_0197 [Salinispora tropica CNB-440]
gi|145302100|gb|ABP52682.1| protein of unknown function DUF6, transmembrane [Salinispora
tropica CNB-440]
Length = 356
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/265 (10%), Positives = 72/265 (27%), Gaps = 9/265 (3%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+WG + L+ + + ++ L + +RV + +V L +
Sbjct: 5 LALAAIWGSSFLFIKIGVRELHPLHLTLYRVGAGALTLLILLVALRDRLPREPRVWAHLV 64
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
G + + +G + + + V P+ + + + +
Sbjct: 65 VTGGIGVALPFTLFGYGGERVESMLSGIWNATTPLVVLPMAVLVFRTERITAARAVGLGL 124
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE--------MC 201
L +++ L + G + + +A G +
Sbjct: 125 GFLGVLVVLGVWQGAGGSHFVGQLMCFGAAACYGVVIPYQKKFVAGRSYSGLALSAAQLL 184
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + L + L F I I+ A ST
Sbjct: 185 MALALLTIVTPFVAGVPPMPTALSGSVLASMVALGALGTGLAFLIHFRNIRVAGASTAAT 244
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVR 286
+ Y P+ +++ +L + + +
Sbjct: 245 VTYVIPVFAVLAGALVLDERLTWHQ 269
>gi|299068543|emb|CBJ39770.1| putative S-adenosylmethionine uptake transporter [Ralstonia
solanacearum CMR15]
Length = 297
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 81/293 (27%), Gaps = 7/293 (2%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
S + G F+ A + + T+++ V V+ + R L+ + ++ G
Sbjct: 2 TRSQHPLQGIAFLIAAVAFFAVFDTLTKYISTTVPVVMALWFRYLFQMVATGATLLPRRG 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+L + G+ V +L + F +L + +TP++ + +
Sbjct: 62 ------RSLLRTRRPGLQVVRGLLLLLVSLFSFLSLRRMPVGDVTAIVMLTPLVVTLVAA 115
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
V L E+++ + I L++ G + A +
Sbjct: 116 VSLGEQVSATRWIFMAGGFFGALMVIRPGGAAFDWGMLLPLGMVVANAAFQVVTSRLASV 175
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
+ + LI G+++S + RA +
Sbjct: 176 DEAGTTQFYTGAVGALLMTCILPFSWQALGGKWWWLLILIGIVSSSGHALLIMAYTRAPV 235
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + Y +++ + D + +
Sbjct: 236 AMLTPYLYMQIGFAMIAGWLVFSHVPDGWSVAGIATIAMCGAAGTWAAARERR 288
>gi|242013377|ref|XP_002427384.1| transmembrane protein, putative [Pediculus humanus corporis]
gi|212511758|gb|EEB14646.1| transmembrane protein, putative [Pediculus humanus corporis]
Length = 355
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 89/302 (29%), Gaps = 25/302 (8%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+G L + + + + +++ V +E+ + R + L +VY +T
Sbjct: 38 LGLLLATISSLFFSLCSAIVKWMVDVDPMELAACRFVGVLLPTIPIVVYCK-------ET 90
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
ML+ + + YA + F PV +FLKE
Sbjct: 91 PFPKGKRLMLILRSFVGTTGLMLSFYAFRNMPLADANVIVFSVPVFVAIFARIFLKEPCG 150
Query: 145 HLQIIAALLIILSLLIMTLHS------------------GIPLLSLAIAVTWSAYCFARK 186
++ +L ++ ++++T ++A
Sbjct: 151 IFNVVTVILTLIGVVLITRPPILFNELVPPLASSNENAKSNIWGAVAAFAATLFGANVYI 210
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+ F + M AL + + G D + ++ + +
Sbjct: 211 LLRALKGLHFSVIMTNFGSFALVQTLLVTYLLGTLCIPKCGIDRILIVALAFFSFGGQIL 270
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ ++ + V I + + + K+ + +V ++++ L +
Sbjct: 271 LTLALQLEQAGPVAIARSADIVFAFIWQILFFKEVPNIYSIAGAILVTSSVIITGLRKWV 330
Query: 307 NS 308
S
Sbjct: 331 LS 332
>gi|49083242|gb|AAT50980.1| PA4834 [synthetic construct]
Length = 285
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A + + + + E++ R ++ +
Sbjct: 9 GVLLAVLASFTFSVMNALVKEASATLPAAEIVFFRSAIGTLLIYLLM--------RQAGV 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + V ML+ + A++ + YA+ S ++P + ++FL ER+
Sbjct: 61 ALSRQGVPMLLVRGVMGALYLVCYFYAIAHIPLADASILAHMSPFFVILFSALFLGERIP 120
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L+++L L++ S+ V + FA +
Sbjct: 121 RAVYWLLLVVVLGALMIVKPFSYSSYSVYAVVGLLSAVFAAGASVAIRQLSARHHTYEIV 180
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPD--TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + F+ L+ G+++ + + V +
Sbjct: 181 FYFLAVATLVAIPLMWNDFVVPATLREWGLLLAIGVVSLLGQVFLTRAFSHESATIVAVT 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y + + D + ++V+A +
Sbjct: 241 RYIGIVFNAGWGWLFWSEVPDALTIAGGVLIVVACIALS 279
>gi|83645096|ref|YP_433531.1| DMT family permease [Hahella chejuensis KCTC 2396]
gi|83633139|gb|ABC29106.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Hahella chejuensis KCTC 2396]
Length = 295
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 99/290 (34%), Gaps = 10/290 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G F+ + +T + + + + V +++ R L+ L + ++
Sbjct: 2 PQDRFLRGVAFIILGECFFVLTGMVVKHISVEAHVWQMVFFRNLFGLAFLTPLLLRSGRS 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + A + + IY + + ++ + P+ +
Sbjct: 62 -------AFKTQRLPLHFLRAALGVAAFSCLIYTFASIRLAESTMLKLMLPLFIPVIAWA 114
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT--WSAYCFARKTIPVGSSEG 195
+L+ER + + L L ++I+ + + + W A A + +G
Sbjct: 115 WLRERPTPILAFSLGLGFLGVIIILQPDSLAAAARLAILAGLWGALFAAGAKVVIGRLGA 174
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ ++ LF + + ++ ++L+ + +L + ++ A
Sbjct: 175 TEPSVRIVFYFNLFSTILSCIPMLWYWRALEPITLVWLLLFAILATIGQLSTTHAYTLAS 234
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+G+ Y + + + I + + I G++V+A + +
Sbjct: 235 PGKIGLYSYASLPIAGLLGWLIWSEELYLELWIGSGLIVLAGALTFFYSR 284
>gi|28377476|ref|NP_784368.1| transport protein [Lactobacillus plantarum WCFS1]
gi|308179686|ref|YP_003923814.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
gi|28270308|emb|CAD63209.1| transport protein [Lactobacillus plantarum WCFS1]
gi|308045177|gb|ADN97720.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 341
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/312 (11%), Positives = 91/312 (29%), Gaps = 29/312 (9%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
L++ + +++ + + + +++ R + + L
Sbjct: 2 KKAYLYIAISTLMFSSMEIALKMAGSAFNPIQLNLIRFFIGAIVLLPFAL---RALKQTG 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
L + + + V + A+ Q + + PV ++ + L+ER
Sbjct: 59 RKLVSADWRLFALTGLVCVIVSMSLYQLAITVDQASTVAVLFSCNPVFALLFSYLILRER 118
Query: 143 LNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L +I+ ++ ++ LLI+ G+ L + +R G
Sbjct: 119 LGRANLISVVISVIGLLIIVNPAHLTNGLGLLLAIGSAVTFGLYSIISRYGSVKRGLNGL 178
Query: 197 FIEMCVLAIPALFYVVWNGFS-------------------GGEHFFLGNIPDTLFLIGYG 237
+ A +V + + L
Sbjct: 179 TMTCFTFFAGAFELLVLAWITKIPAVANGLTAIGLRQFAAIPVLVNVNLNYFWLLFFIGV 238
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ F + +++ +ST ++ + P L + + IL + I + +++I
Sbjct: 239 CVTGGGFAFYFLAMEQTDVSTASLVFFIKPGLAPILAALILHEQILWTTVVGIVVILIGS 298
Query: 298 VVYLLPTVINSG 309
VV +
Sbjct: 299 VVTFVGNRFRER 310
>gi|332751565|gb|EGJ81964.1| hypothetical protein SF434370_3695 [Shigella flexneri 4343-70]
gi|332751837|gb|EGJ82234.1| hypothetical protein SFK671_4161 [Shigella flexneri K-671]
gi|332752621|gb|EGJ83007.1| hypothetical protein SF274771_4184 [Shigella flexneri 2747-71]
gi|332764516|gb|EGJ94748.1| hypothetical protein SF293071_4071 [Shigella flexneri 2930-71]
gi|332997978|gb|EGK17584.1| hypothetical protein SFVA6_4358 [Shigella flexneri VA-6]
gi|332998540|gb|EGK18137.1| hypothetical protein SFK218_4549 [Shigella flexneri K-218]
gi|333013935|gb|EGK33297.1| hypothetical protein SFK304_4396 [Shigella flexneri K-304]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|295401432|ref|ZP_06811402.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976482|gb|EFG52090.1| protein of unknown function DUF6 transmembrane [Geobacillus
thermoglucosidasius C56-YS93]
Length = 285
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/264 (9%), Positives = 78/264 (29%), Gaps = 4/264 (1%)
Query: 51 SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIY 110
+ R L + + + + + + + + +L + F+
Sbjct: 12 GPFTFAALRFLLASFAMIIVLFFLKATKPKGMEWIILFIVGLLQTTAMFLLINYGMMFVN 71
Query: 111 ALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLL 170
+ + + S+ + ++ + I+ L+ I+ T+ + +
Sbjct: 72 VSKSSILIYSMPIWSGILGYIFLHESLNYYKVISLVLGISGLVSIIGFEFFTIQNKSVIF 131
Query: 171 SLAI----AVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
+ A++W+ K ++ ++ V G+
Sbjct: 132 GECLLLLAAISWAGANIIVKKYFSNHNKMIVSTWQMIFGTIGVVVAAILMEWGQPIQFTP 191
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+ + + + +SF F + + + + I PL+ I +L + +
Sbjct: 192 MSIFILIYTGVIASSFCFTCWYVVLTKLDTTVASISLLFVPLVAIFLDWLLLGEKMTINI 251
Query: 287 TIVFGIVVIAMVVYLLPTVINSGK 310
I +V I + + + K
Sbjct: 252 AIGALLVTIGVYLATVVKPKERRK 275
>gi|261493167|ref|ZP_05989698.1| RhaT protein [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261495911|ref|ZP_05992333.1| RhaT protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261308432|gb|EEY09713.1| RhaT protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311170|gb|EEY12342.1| RhaT protein [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 300
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 101/299 (33%), Gaps = 20/299 (6%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S +G + A + WG + + L V + + R W + +++F
Sbjct: 3 SSSLKLGYFSLIVATLFWGGNFVLGKVLSGAVQPITLTYLR--WLPAFLILVLLFFRPTW 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ L P+ M V + + L T S ++PV+ +FL +
Sbjct: 61 RV--MHLLKPRLGVMWVLGLLGVILFPATLYEGLKTTTALNASLYLAISPVLVLFLNRLV 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHS---------------GIPLLSLAIAVTWSAYCF 183
KE+++ + + A++ +L +L + + +++ AV
Sbjct: 119 FKEKISPIILSGAIISLLGVLWLLMQGKLTRLFSLAINQGDLWAIASTISWAVYCCVIRL 178
Query: 184 ARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFV 243
+ I + + VL + F + S L + + +
Sbjct: 179 RPQGISNTVFLTVLVGLAVLTLTPFFIYEYVAESAKNLANLTALQWSGVGYLVIGPSILS 238
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ +++GI + +M PL + S+ +L + + + I ++ +++
Sbjct: 239 YAFWNFGIAIVGSAKGAVMTNFTPLFAAIFSIILLNESVHSYHIISAILITAGILICSY 297
>gi|159900334|ref|YP_001546581.1| hypothetical protein Haur_3817 [Herpetosiphon aurantiacus ATCC
23779]
gi|159893373|gb|ABX06453.1| protein of unknown function DUF6 transmembrane [Herpetosiphon
aurantiacus ATCC 23779]
Length = 296
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/292 (8%), Positives = 84/292 (28%), Gaps = 14/292 (4%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ +N + + + ++ ++ ++ + +R+L +
Sbjct: 8 TNQNRVEIPWRAYVALAIGIVCIALSAIWVKWAAVPGPVS-AFYRMLIPAAILLP----- 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ +A + + A + A+L ++ P+
Sbjct: 62 --WWFAKRPKHLPKQATRLSLLGGVFFAFDLALWNSAILLTSAANSTLFANNAPLWVGLG 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI------AVTWSAYCFARKTI 188
+ +ERL + ++ ++++ + L A + A
Sbjct: 120 AWLIFRERLPQRFWWGMAIALIGVVVIMGENLQQLTMSQGDLLAISAGGFYAAYLLTTQR 179
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + G + + + + +
Sbjct: 180 ARAELDTLTFMTLGIVVSVVILGLMCLIGGYSIIGFSPQTWWSLMGLGLVSHLGGWLAIN 239
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
Y + K +T + P+L + S+ +L + ++ + I +V+ + +
Sbjct: 240 YALGHIKAATASVSLLGQPVLTALISIPLLNESLNIFQIIGGSLVIGGIWLV 291
>gi|294677549|ref|YP_003578164.1| hypothetical protein RCAP_rcc02013 [Rhodobacter capsulatus SB 1003]
gi|3128363|gb|AAC16215.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
gi|294476369|gb|ADE85757.1| protein of unknown function DUF6, transmembrane [Rhodobacter
capsulatus SB 1003]
Length = 296
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 85/278 (30%), Gaps = 17/278 (6%)
Query: 35 ILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
+ W + + + + + R +L + L +
Sbjct: 19 LFWAGNFIVARASRGEWPPVALSFGRWSIALIALLPFAW----PWLRRDWPLYRRYFGRI 74
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
L+ + +A + L T P++ + LG++F +RL I+ ++
Sbjct: 75 LLLTLPGVAAFNSLVYWGLQTSTATNGMLLNSTIPLLIMALGALFWGQRLGLWAILGLIV 134
Query: 154 IILSLLIMTLHSGIP------------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L + ++ L ++ A+ + + G
Sbjct: 135 STLGVAVVILQGSWERAAALDFARGDLIIFAAMVAWALYTMGLKTFPAEVNRIGLLAVQI 194
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
LA+P L + S G + + + + ++ ++ A + G
Sbjct: 195 ALALPILAPFLVWEISSGRVPVWTPASIGALVYIGIVPSVLAYLFYTKAVEMAGPARAGQ 254
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ P+ + S L +P+ FG+++ +V+
Sbjct: 255 FIHLLPVYGAILSAAFLHEPLHLYHAAGFGLILGGIVL 292
>gi|83594602|ref|YP_428354.1| hypothetical protein Rru_A3272 [Rhodospirillum rubrum ATCC 11170]
gi|83577516|gb|ABC24067.1| Protein of unknown function DUF6, transmembrane [Rhodospirillum
rubrum ATCC 11170]
Length = 314
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 88/298 (29%), Gaps = 11/298 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ G + ++L E + R L + + G ++L
Sbjct: 14 IAGMILCTAFMGSSFPSGKYLISEEAMPAFYAGGWRFLLAGGLILAFCAAKDGLGAILPA 73
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQ--GFLTSFSYFVTPVISVFLGSVFLKE 141
+ + + V L L + S F P+ L L E
Sbjct: 74 SGGSVIKGALFVLVVGCLQTAGTMGFLNLALTTLSASMASLLLFTNPLWVAILAHFALGE 133
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK------TIPVGSSEG 195
L+ +++A + IL + + L + + C+A S
Sbjct: 134 TLSWHKVVALVCGILGVSLCLGGGADHGLGGIVIALAGSLCWALCTLISKKHKFDKSVFV 193
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
F L + + + + F+ G + F ++ + R
Sbjct: 194 FTGWQLTLGALVMLAISKLSGEAYDIDRITGWGIACFIWLVGPASIGSFGLWFTALSRRG 253
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
+ + PL V S+ +L + + I I+++A+ + LP +++ +
Sbjct: 254 ATVTSSYLFLVPLFSAVFSMMVLGEAVSPHSLIGGAIIIVALWLINLPQTVSAVWRER 311
>gi|157155201|ref|YP_001465441.1| putative transporter [Escherichia coli E24377A]
gi|256021647|ref|ZP_05435512.1| hypothetical protein ShiD9_22184 [Shigella sp. D9]
gi|260857655|ref|YP_003231546.1| putative permease [Escherichia coli O26:H11 str. 11368]
gi|260870664|ref|YP_003237066.1| putative permease [Escherichia coli O111:H- str. 11128]
gi|300824334|ref|ZP_07104449.1| integral membrane protein DUF6 [Escherichia coli MS 119-7]
gi|157077231|gb|ABV16939.1| putative transporter [Escherichia coli E24377A]
gi|257756304|dbj|BAI27806.1| predicted permease [Escherichia coli O26:H11 str. 11368]
gi|257767020|dbj|BAI38515.1| predicted permease [Escherichia coli O111:H- str. 11128]
gi|300523140|gb|EFK44209.1| integral membrane protein DUF6 [Escherichia coli MS 119-7]
gi|323154061|gb|EFZ40267.1| hypothetical protein ECEPECA14_4091 [Escherichia coli EPECa14]
gi|323177969|gb|EFZ63553.1| hypothetical protein ECOK1180_3565 [Escherichia coli 1180]
gi|323182046|gb|EFZ67456.1| hypothetical protein ECOK1357_4329 [Escherichia coli 1357]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 87/278 (31%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G ++
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRG-------MRPTPFKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|307729143|ref|YP_003906367.1| hypothetical protein BC1003_1096 [Burkholderia sp. CCGE1003]
gi|307583678|gb|ADN57076.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
CCGE1003]
Length = 309
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 84/276 (30%), Gaps = 3/276 (1%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y++WG T L L L + R L++ G+F + +
Sbjct: 33 YLVWGSTYLAVHVALGSFPPLLMSGLRNLFAGVGLFAFAARRNPVWPSFAEIRNAGLVGT 92
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
MLV ++ + + + + + VI+ G K + +
Sbjct: 93 MLVGLSSGMLAYGMRTVG--TGTAAVMVATVPLFATVIAAVAGRKIGKGEWFAVALGLVG 150
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
+ ILS S L++ + A + S+ F + + +
Sbjct: 151 IAILSHGDSAPGSAGGSLAILCGALFWAGGAHLASRLKLPSDLFLSTSLQIGLGGAMSTM 210
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
SG + +P F+ + + + + I+ Y P++ +
Sbjct: 211 VAWVSGERMLEVHFLPVLAFIYLMLIGTMAAYVAYGFLIRHTSPIIASSCMYVNPVVAVA 270
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+L +P+ I ++++++ +
Sbjct: 271 LGALLLGEPVTHSTVIATVVILVSVGLSFWLDYRKK 306
>gi|189459663|ref|ZP_03008448.1| hypothetical protein BACCOP_00291 [Bacteroides coprocola DSM 17136]
gi|189433622|gb|EDV02607.1| hypothetical protein BACCOP_00291 [Bacteroides coprocola DSM 17136]
Length = 293
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 82/286 (28%), Gaps = 18/286 (6%)
Query: 28 LFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +WG T + T+ L +S E+ R + + G++F +
Sbjct: 11 ILAILTVAVWGTTFISTKILINNGLSPQEIFLLRFIIAYIGIWFI------SPRKIFSDS 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ T+ + + + +++H
Sbjct: 65 IKDELTMFAAGLTGGTLYFLTENTALKFTQTTNVAFIICATPLLTTGLSLLTDRNNKVSH 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIA----------VTWSAYCFARKTIPVGSSEG 195
++ ++ ++ + I+ + + L I + + + + S
Sbjct: 125 NWLLGSIAALIGVAILIFNGSVILKLSPIGDFLTLAAALSWAFYSLIINKLSKKYRSIFI 184
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L + + FS FL L L + F +++ +
Sbjct: 185 TRKIFFYGTLGILPAFIIHSFSFPLEGFLRPEVFINLLFLSLLASLVCFVVWNMVLMHLG 244
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y PL +++ +L + + I +V++ + +
Sbjct: 245 TIMSSNYLYLNPLFTTLAAFVVLNETLTIYAFIGVLLVMLGVFLST 290
>gi|188578731|ref|YP_001915660.1| integral membrane protein DUF6 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188523183|gb|ACD61128.1| integral membrane protein DUF6 [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 285
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 98/284 (34%), Gaps = 9/284 (3%)
Query: 30 VFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ A + + + L L+V R SLP V + +G +++ P
Sbjct: 1 MVVAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAGPRAIV------P 54
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
G+ + + V G F+Y L YFV P++ L L E + +
Sbjct: 55 VRWGLHLLRGALGMVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSVPLLGEHVGPRRW 114
Query: 149 IAALLIILSLLIMTLHS-GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
A + ++ ++++ + + V +A +A I V ++
Sbjct: 115 AAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAATAYAVAAITVSLLTRTDTPQAMVVWFL 174
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
LF + G + + + G GL + + R + S + +EYTA
Sbjct: 175 LFMAIGAGLLAIPGWVPLHAGHAGLIAGMGLAGALGQVALTQAFMRGEASMIAPLEYTAL 234
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGK 310
+ +I + + D+ GI+V + + + + +
Sbjct: 235 VWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRREPIRRADR 278
>gi|89896483|ref|YP_519970.1| hypothetical protein DSY3737 [Desulfitobacterium hafniense Y51]
gi|89335931|dbj|BAE85526.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 291
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 91/285 (31%), Gaps = 9/285 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + L G + + L S L + + R + + + + K
Sbjct: 8 LLIVVTTFLMGSSFAVVKIGLIYSSPLLLAALRFILAGGIMGIIVGVLKRTHPTTKGQWV 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+G + + + +L T ++ F P++ V +VFLK R
Sbjct: 68 KLLIIGAFQTAGVMGCI-----FLSLRTITASESAILTFTNPLLVVLFSTVFLKMRYRLY 122
Query: 147 QIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q I +L ++ + I I + ++ + A G ++ + + +
Sbjct: 123 QWIGVILGLVGVSITMGAQIEFRIGVFFGILSAVFWAIATLLTKRWGGLTDIWVLSAYQM 182
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L V + F + + L + + F ++ Y +++ +
Sbjct: 183 LFGGLILWVGSFILETPFFIVNGTALLILLWLSLISSIVQFALWYYLLQKGEPGKTSAFL 242
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ AP +++ +L P+ +++I + +
Sbjct: 243 FLAPFFGVLTGWLLLGDPLYPSLLAGGLLIIIGIFLVNKDFNRKR 287
>gi|319954061|ref|YP_004165328.1| hypothetical protein Celal_2543 [Cellulophaga algicola DSM 14237]
gi|319422721|gb|ADV49830.1| protein of unknown function DUF6 transmembrane [Cellulophaga
algicola DSM 14237]
Length = 297
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 89/282 (31%), Gaps = 3/282 (1%)
Query: 35 ILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG T + + + + L ++ +R+ ++ + I L + + VG++
Sbjct: 16 FIWGFTAVLGKLIT-IDALPLVWYRMGIAVLLIAVFIAINKFSLKIAPKQIAKMAVVGII 74
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLI 154
+ + + T + ++ + E + + ++ L I
Sbjct: 75 IALHWLTFFKAIKVSNVSIALATLSTGALFTAIIEPFIYKRKMIWYEIVFGIVVVIGLYI 134
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
I ++ + + L A+ + + S F E+ + Y+
Sbjct: 135 IFNVETEYIEGIVLALISALLAAIFSIANGKLIQSHRPSVISFYELGAGVLFITVYLAIR 194
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
G F + I + ++ F +K TV + P+ I+ +
Sbjct: 195 GDFDASFFQVSKNDWIYLFILASICTAYAFIASVRVMKVLTPYTVMLTVNLEPVYGILLA 254
Query: 275 VFILKQP--IDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
L + ++ + +++ +V L K + +
Sbjct: 255 FVFLGESEKMNPLFYFGALLILSTVVANGLIKNKGKLKKRNR 296
>gi|296160867|ref|ZP_06843680.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
Ch1-1]
gi|295888959|gb|EFG68764.1| protein of unknown function DUF6 transmembrane [Burkholderia sp.
Ch1-1]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 100/299 (33%), Gaps = 11/299 (3%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
AS G + A ++ G Q S V+ R ++ +
Sbjct: 2 ASNEIRRGAAEMTLAMLMSGTIGWLV-VSSQQSPFNVVFFRCIFGGATLALVCAVLGLFR 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L + K +G+ + + ++W A + + Y P + V LG++
Sbjct: 61 RRLF----SWKMLGLALLGGAAIVINWVLLFAAYSRASISMATAVYNTQPFMLVALGALV 116
Query: 139 LKERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ER++ + ++ + L+ + L L +A +A +I
Sbjct: 117 FRERISPSAVAWLVVAFIGLVFVVKVEPAVLAVPGQYLVGVAYAVGAAAMYAVSSIITKR 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+G + L +L ++ F + + ++ + ++ + I+
Sbjct: 177 LKGTPPHLIALIQVSLGVLMLAPFVRFDALPTSGVQWLELIVLGVVNTGLMYVLLYGAIQ 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ S G + + P++ IV Q + ++ + ++++A L I K
Sbjct: 237 KLPTSMTGALSFIYPVVAIVVDRVAFGQTLAWIQVLGAVLILLAAAGVNLGWRIVPQKR 295
>gi|294624602|ref|ZP_06703276.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601104|gb|EFF45167.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 295
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/267 (10%), Positives = 75/267 (28%), Gaps = 3/267 (1%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + L+ + + ++ R+ + + L + +
Sbjct: 26 GVVWGCSFLFMRVAAPKFGTVVLVEIRLALGALVLLPFLWLARERFPLHRWPML-AAIGV 84
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ +L A + + + F + + L L +
Sbjct: 85 LNSALPFLLFAWAAQHAPAAVGAICNAMTVLFTALIAFLFFGERIGTRRALALLVGFIGV 144
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
L++ + L G L+ A A + +G L AL
Sbjct: 145 LVLATGKSAGLSVGPAALAGAAASLLYGIGYNLVKRHMGDLPPAASAASTLGCSALLLAP 204
Query: 213 WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIV 272
+ + + + F ++ I+R + + Y P+ +
Sbjct: 205 LAWWQWPTT-PVPAVAWACATALGVVCTGLAFLMYYRLIQRIGPARASTVTYLVPVFGAL 263
Query: 273 SSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +L +P+ + +++ ++
Sbjct: 264 LAWSLLGEPLTWTMLVAAVLILGSVAF 290
>gi|241113684|ref|YP_002973519.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240861892|gb|ACS59558.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 288
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 79/289 (27%), Gaps = 9/289 (3%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
T + + A IL + + L V L + R + L V IV
Sbjct: 5 RTGLAVCLMVAASILNSFDAVIVRLLPGEVHPLMIGFFRSFFGLLVVTPWIV-------- 56
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ LK+ + V A + A + F P+ V + LK
Sbjct: 57 SRVDLKSSPYRVLHVVRAGLKLASLVALFVAFAHAPLADATAINFTMPMFLVLGAWLVLK 116
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
E + + + + ++I+ + A A + +
Sbjct: 117 EHVGISSVAGIVAGFIGVMIIIRPGASGFDQWLLFALAGAVLTAASQLMLRRMALRDSAD 176
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
++A + V + + L G L + + + A S +
Sbjct: 177 RLVAWNLIATVPLGLIVMLPVWSMPTWSQLGLLALQGALGALNMTLITRAFSMATASVLA 236
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+++ ++ + + + I ++ A ++
Sbjct: 237 PLDFLRLPVVALMAFSFFAEVPAVQTWIGAAVIFGAAIIGTRGMTWRRK 285
>gi|313126272|ref|YP_004036542.1| dmt(drug/metabolite transporter) superfamily permease
[Halogeometricum borinquense DSM 11551]
gi|312292637|gb|ADQ67097.1| DMT(drug/metabolite transporter) superfamily permease
[Halogeometricum borinquense DSM 11551]
Length = 319
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/306 (12%), Positives = 89/306 (29%), Gaps = 15/306 (4%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
+S S + L WG + + + LE L R + + V
Sbjct: 1 MSIRTRSDTSNWNALLFIALSCFWGTSFVAIEAGLEYFPPLLFAGIRYGIAGLAILSYAV 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + V I+A + + + + + PV++
Sbjct: 61 ATTDRW----HPSGRDEWLSAAVAGVFIIAAYHALLYIGEMYVSASVAAVVVSLAPVLTA 116
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH----------SGIPLLSLAIAVTWSAYC 182
+ L + L+ + + LL I+ ++I+ GI L+ L+ A
Sbjct: 117 VFAAGILGQPLDKIAGVGFLLGIVGVVIVANPDPANLLSTNLLGIVLVLLSTASFAIGGV 176
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+E ++ LF + + +
Sbjct: 177 LTEPLRTSLPAESMQAWAMLIGAGVLFVGAVARGESPATIEWTSTAIISLMYLTFVSGVV 236
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F I+ +R + + ++ Y P++ ++ +L + + + F V I +
Sbjct: 237 GFLIYFALHERVGATEINLVSYLEPVVASLAGWVLLGHVVSSTTLVGFVTVFIGFALVKR 296
Query: 303 PTVINS 308
+
Sbjct: 297 HAIRAR 302
>gi|170697367|ref|ZP_02888459.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria IOP40-10]
gi|170137698|gb|EDT05934.1| protein of unknown function DUF6 transmembrane [Burkholderia
ambifaria IOP40-10]
Length = 298
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 76/292 (26%), Gaps = 1/292 (0%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVY 73
S ++ ++ V + W + + L ++ L++ + R + V + +
Sbjct: 6 SSSRSARQPLVAAGAVAFTIVSWASAFPFIRIGLHGLAPLQLAAARFATAAVLVIAWLAW 65
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+D L+ + + L + A T +
Sbjct: 66 RRPAKPSTRDALRFLVCGFLGIALYNALLNTGEQTVSAGAASFIVNTLPIFTALLAAVFL 125
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L L +A + +I L G + A SA F + +
Sbjct: 126 HEHFNRWGWLGSLISLAGIAVIAHGQPGGLVLGSGSTLIFGAALCSASYFVLQRRLIPVY 185
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
L AL W + + L+ + + ++ +
Sbjct: 186 GALPCAAYTLLAGALLLTPWLPGALVSLGGASHDTTLAVLVLGVFPAALGYATWTVALGY 245
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ Y P + V S+ + + + + ++ L
Sbjct: 246 FGAARAANFLYLTPAVATVLSIMLTGERPGIETVCGGLLAIAGVMCVALRGR 297
>gi|134279859|ref|ZP_01766571.1| putative membrane protein [Burkholderia pseudomallei 305]
gi|134249059|gb|EBA49141.1| putative membrane protein [Burkholderia pseudomallei 305]
Length = 304
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/308 (13%), Positives = 99/308 (32%), Gaps = 11/308 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
++ AS G L + A ++ G Q ++ V+ R L+ +
Sbjct: 1 MASNPASSDARRGALEMVVAMLMSGTIGWLVVSSRQ-HLMNVVFFRCLFGGATMLIICAA 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
LL+ L + + + + + +W A + + Y P + V
Sbjct: 60 LG----LLRRDLLTKRTIAFALLGSVAIVANWVLLFAAYSRASISMATAVYNTQPFMLVA 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKT 187
LG++ +ERL +L L ++ L L +A+ +A +
Sbjct: 116 LGALVFRERLTASAAAWLVLAFGGLALVVRVEPAVLAVPGEYLEGVALALGAAFLYAVSS 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
I +G + L + + F + + + ++ +
Sbjct: 176 IVTKRLKGTPPHLIALFQTGVGVLALAPFVHYDALPATAGQWLDLVALGVVNTGIMYVLL 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
I++ +T+G + + P++ IV F Q + + ++++ L I
Sbjct: 236 YGAIQKLPTATIGALSFVYPVVAIVVDRFAFGQTLAWSQVGGAALILLTAAGVNLGWRIV 295
Query: 308 SGKNKTKK 315
+ +
Sbjct: 296 PARRVAAR 303
>gi|126728129|ref|ZP_01743945.1| hypothetical protein SSE37_19102 [Sagittula stellata E-37]
gi|126711094|gb|EBA10144.1| hypothetical protein SSE37_19102 [Sagittula stellata E-37]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 90/285 (31%), Gaps = 10/285 (3%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G + + + + + +FL + +++ R + GV + L
Sbjct: 1 MRGIVLMALGFFAFAACDVQAKFLTDTLPPAQIVFFRQIGLFLGVLVMLAMKGAHL---- 56
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ G+ + A F+ A+ F+ P + +G++FL+E
Sbjct: 57 ---LRSQLPGVQILRGICAASSALCFVLAVTYVPLADAVAVTFIAPFLVTLMGALFLREP 113
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A + + +LI+ V +A FA + + + G M
Sbjct: 114 VGPRRWAAVAVGFVGMLIVIRPGLGVFHPAIGFVLIAACFFATRQVLSRTLSGADNVMTT 173
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGY-GLLNSFVFCIFSYGIKRAKLSTVGI 261
+A ++ V + + + +I L + + A+ +
Sbjct: 174 VAFTSITSTVLVALALPFVWTTPDTLQLWLVILGLALTAGVGEVLVIRALDIAQAVALAP 233
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ Y+ + + D + I+V + +Y L
Sbjct: 234 IHYSLIIWSTFYGYVVFADLPDVWTFVGCAIIVAS-GLYTLHRER 277
>gi|71084054|ref|YP_266774.1| transport protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91762878|ref|ZP_01264843.1| hypothetical transport protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|71063167|gb|AAZ22170.1| hypothetical transport protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718680|gb|EAS85330.1| hypothetical transport protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 88/287 (30%), Gaps = 18/287 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
+F+F A + W L +F Q V + +R L++ + + K +
Sbjct: 9 YIFLFLAALFWSGNFLVGKFASQYQVPPFSLNFYRWLFAWLILAPFTI----QELFNKRS 64
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ T + + Y+L Q PV+ +F+ S+ E+ N
Sbjct: 65 YILENYKYYTILGITSVTIFNSIVYYSLNFTQVISGVLMISTIPVMIIFISSILKIEKTN 124
Query: 145 HLQIIAALLIILSLLIMT------------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
QI+ + ++++ + G + + + +K S
Sbjct: 125 TFQIMGVTCSFIGVVLIITKANLGILMNLDFNKGDITMVFGMLSWATYSALLKKKKHELS 184
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
G + L + + + G L + F + G+
Sbjct: 185 QLGLLEVVISFGFIFLIPIYFIEYQMGFRIVLNQNFYMILFYVVLFPGLASFIFWIKGVA 244
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ G+ + P+L + ++ I + + ++ +++
Sbjct: 245 LIGANRAGVFLHMMPILSAIMAMIIFNEKFMFYHMLGAIFILTGILL 291
>gi|50555137|ref|XP_504977.1| YALI0F04081p [Yarrowia lipolytica]
gi|49650847|emb|CAG77784.1| YALI0F04081p [Yarrowia lipolytica]
Length = 435
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/328 (11%), Positives = 91/328 (27%), Gaps = 36/328 (10%)
Query: 7 KKEYSKGLSKENASLPTMMGTLFVFCAYILWGITPLYTQFL-------EQVSVLEVISHR 59
K+ L++ A G L + + + L + + +++ R
Sbjct: 11 KRLAKHLLTQFEALTKGYTGMLLALMSSFFSSGMAVTARLLQNGNNPDDDFNAFQILFLR 70
Query: 60 VLWSLPGVFFAIVYFSGGL---------SLLKDTLKNPKAVGMLVFSATILAVHWGFFIY 110
+ ++ V + L+ P+ +LV A Y
Sbjct: 71 MSLTIGVVLWGQHKVYARKVKQQEENLPPRLQFITGIPEVRHLLVIRALCGFFGVFGLYY 130
Query: 111 ALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG---- 166
+L + + F+TPV + L +FL E+ + L+ ++++
Sbjct: 131 SLNYLELSDATVLTFLTPVATSLLAWMFLGEKFTRSMALGGLVAFCGVILIARPVFLFQL 190
Query: 167 ----------------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
+ + V F + L
Sbjct: 191 ITGSRDTSGVRPIDRLRSIGFSMLGVLGGGSAFVAIRSIGDRAHPTVNVQYFSTWCWLIS 250
Query: 211 VVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLM 270
++ ++G F++ L + + R K + V + YT +
Sbjct: 251 LIALVYTGKGIRLPHTWSQAAFIVILALCGFMTQLCMTGALTREKAAKVANITYTQIVWA 310
Query: 271 IVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ + D + G+++ + +
Sbjct: 311 LLWDKVLWNNWPDVWSVLGGGLIIGSAI 338
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 24/73 (32%)
Query: 231 LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVF 290
L+ L F Y + +LS ++ + P+ + + L + +
Sbjct: 112 HLLVIRALCGFFGVFGLYYSLNYLELSDATVLTFLTPVATSLLAWMFLGEKFTRSMALGG 171
Query: 291 GIVVIAMVVYLLP 303
+ +++ P
Sbjct: 172 LVAFCGVILIARP 184
>gi|332968160|gb|EGK07242.1| EamA family transporter [Desmospora sp. 8437]
Length = 377
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 94/290 (32%), Gaps = 20/290 (6%)
Query: 27 TLFVFCAYILWGITPLYTQF-------LEQVSVLEVIS--HRVLWSLPGVFFAIVYFSGG 77
L A LWG ++ + +++ +R + + +
Sbjct: 86 VLTALTAMFLWGSAFPMIKWGYDSLQIASGDTGQQILFAGYRFFLAALMILVVFHLLNRR 145
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
++TL + +G+ + G + + S+F +F +
Sbjct: 146 PRFQRETLLSLVWIGLFQTFLQYALFYIGLAYSTGIQGSVLAGTTSFFQ----ILFARWM 201
Query: 138 FLKERLNHLQIIAALLIILSLLI-------MTLHSGIPLLSLAIAVTWSAYCFARKTIPV 190
E + +I+ ++ +++ M G L L +A+ SA+
Sbjct: 202 VPDEPITWRKILGLVIGFGGVVMVNLRQESMEFSLGWGALLLLVAMMSSAFGNLLARKGA 261
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
+ ++ + +L ++ G H F N L L++ F +++
Sbjct: 262 ARMDVAYLTGYQMLFGSLGLMLTGISLAGWHPFSFNPESGAILFYLAFLSAAGFVLWNNV 321
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+K + V + + P+ ++ S IL + + I +V + +
Sbjct: 322 MKYNPVGKVSMFLFAIPVFGVMLSSLILGETLHRFVLIGLALVAAGIWIV 371
>gi|301382809|ref|ZP_07231227.1| rarD protein [Pseudomonas syringae pv. tomato Max13]
Length = 294
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 112/295 (37%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A +L+G+ YT ++ + E+ R+L ++P ++ + L
Sbjct: 3 KGVVLSVLASVLFGVMYFYTSLMKPLDGEEIFGWRMLLTVPCATLFMLVSGDWRRVRDLA 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + L+ S+ +L F++A L + S YF+ P+ +F G V E
Sbjct: 63 ARLWQRPLLIFGLLLSSMLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMIFTGRVVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L++LQ +AA ++ + G + F + G +
Sbjct: 123 HLSYLQKVAAAFAMIGVGHELWRLGSFSWETLLVAGGYPLYFVLRRKLKTDHLG---GLW 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L W +G H L + G++++ + + S G+
Sbjct: 180 FDMLLMLPIGFWFISNGHPHAIQQAPLLYLLIPLLGVISASALVSYIVASRLLPFSLFGL 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y P+L++ ++ + + I + + + +A+VV ++ + + + +
Sbjct: 240 LSYVEPILLVGVALLLG-ESIGRDEWLTYLPIWLAVVVLMIEGAKHMLAQRRRDA 293
>gi|269962843|ref|ZP_06177183.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832397|gb|EEZ86516.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 84/293 (28%), Gaps = 17/293 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F ++WG + + + + +R ++ + + + + +
Sbjct: 3 YLLPFFTVMIWGGNSIVNKMAASAIEPSAMSFYRWFVAMVLLTPFCL----PAVIRQRHI 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + ++ YA LT + + P+ISVFL L + ++
Sbjct: 59 IRPYLPKLACLALLGMVLNQSLGYYAGLTTTASNMALITSLVPLISVFLSVPLLGKSISM 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
L + ++ + L M H I +A A
Sbjct: 119 LSVAGGVISLGGLAFMLGHGDITYFLHQDMTQGDSLMLLAALCYAIYCVLLKRWKMPFNS 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + S +P + + + ++ I
Sbjct: 179 MTLVYMQGFFSLVMLAPLWLSSDQLLPSQSALPLIAYAGIAASIFAP--LMWVKAIDLIG 236
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P++ + + +L + + I +V+ +++ +
Sbjct: 237 ADSSAMFMNLMPVVSVALASTMLGEEVHVYHIIGGMLVISGVILSQIKIRKKM 289
>gi|228938300|ref|ZP_04100913.1| Uncharacterized transporter [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228971178|ref|ZP_04131809.1| Uncharacterized transporter [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977787|ref|ZP_04138171.1| Uncharacterized transporter [Bacillus thuringiensis Bt407]
gi|228781897|gb|EEM30091.1| Uncharacterized transporter [Bacillus thuringiensis Bt407]
gi|228788505|gb|EEM36453.1| Uncharacterized transporter [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821337|gb|EEM67349.1| Uncharacterized transporter [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326938809|gb|AEA14705.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 313
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 97/292 (33%), Gaps = 11/292 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ +++ + L + + +++G ++ + E++ R +++ + +
Sbjct: 1 MLQKSFKQEKTVPALKMIASMVIFGSVGFFSVQ-TNLPSFELVFVRCIFATIFLSVCWLL 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ K V ++ L +W F A + Y + PVI +
Sbjct: 60 TGQYKQDKWE----RKEVIQVLICGFFLVFNWVFLFKAFENMSVTIAISVYHLAPVIVLL 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIM------TLHSGIPLLSLAIAVTWSAYCFARKT 187
+GS+ KE+L + II+ ++ + L++ + + + +
Sbjct: 116 IGSIVFKEKLTLISIISIVVCFVGALLIAGIDGSFSFGSLMSSGMIWGFLAALFYAFTTL 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
G ++ M L +++ L T + + V+ +F
Sbjct: 176 FGKGINKMSAYAMTFLQTFLGIFLLIPFIDLDAFSGLTQSNWTYIIATGFIHTGIVYYLF 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ T+ I+ + P + I+ + ++ + I M +
Sbjct: 236 FDSLRHLSTKTISILVFLDPAVAILLDTVLTGFRPTLMQITGILFIFIGMTL 287
>gi|229103672|ref|ZP_04234353.1| Transporter, EamA [Bacillus cereus Rock3-28]
gi|228679794|gb|EEL33990.1| Transporter, EamA [Bacillus cereus Rock3-28]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFFMECSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIIAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMPSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ + + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVKKGGIKK 294
>gi|218529966|ref|YP_002420782.1| hypothetical protein Mchl_2007 [Methylobacterium chloromethanicum
CM4]
gi|218522269|gb|ACK82854.1| protein of unknown function DUF6 transmembrane [Methylobacterium
chloromethanicum CM4]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 72/278 (25%), Gaps = 6/278 (2%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + A +LWG + L VS L + R +F + L
Sbjct: 18 VLLLGGAILLWGANWPVMKLGLGHVSPLWFSAARFATGAACLFAWQALRGEVWWPQRRDL 77
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++G+ + +V PV + G +
Sbjct: 78 PRIASIGLFQMMLFTALGTVAMRHLPAGRSAILSYTTPLWVLPVAVLVFGERIERRHWAG 137
Query: 146 LQIIAALLIILSLLIMTLHS-----GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + +++L G + +A ++ W+ + +S
Sbjct: 138 LGLAGLGVLVLLNPHAVDWGDGQVVGANAMLVAASLAWAVCILHLRYGRASASAIQLAPW 197
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+L A + G + +F FC + R S
Sbjct: 198 QMLLAAATLAPLAYAVEGPFTGDGTAAFWACLGFVGPVATAFCFCAVNAASARLPASATA 257
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ P+ + S L + + +V+ +
Sbjct: 258 TLMMAVPVTGLALSTATLHEDPSLDLIVGALAIVLGIA 295
>gi|115375731|ref|ZP_01462985.1| membrane protein [Stigmatella aurantiaca DW4/3-1]
gi|310825143|ref|YP_003957501.1| hypothetical protein STAUR_7919 [Stigmatella aurantiaca DW4/3-1]
gi|115367294|gb|EAU66275.1| membrane protein [Stigmatella aurantiaca DW4/3-1]
gi|309398215|gb|ADO75674.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 353
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 82/291 (28%), Gaps = 7/291 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG---- 76
P + G + A L+G++ + L S V++ + +
Sbjct: 2 SPRVKGAVLGLSAAALFGVSAPVAKLLLPSSTPLVLASLLYLGGGLGLLGLEALRRLSPS 61
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
G+ + T+ + + + L G S + +++ L
Sbjct: 62 GIQGREATVGRKDVPLLTGVIVCGGILGPVLMLVGLQRMSGVAASLMLNLEGPLTILLAL 121
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS---LAIAVTWSAYCFARKTIPVGSS 193
+ E L +AA ++ ++ L G + + S
Sbjct: 122 LVFGEHLGRAGALAAGFVMAGAAVLGLQEGELHGDLLGVLALAGACLAWAVDNNLTQRLS 181
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + F L+ + +Y ++
Sbjct: 182 LKDPLTLVRIKALGSGVCMLVLAWVTGQPFPSTPVQGGALVLGFASYGLSIVLDAYALRL 241
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ TAP + + +V +L + + + + G++ +++ L
Sbjct: 242 LGAAREAAYFATAPFVGALVAVPLLGETLRPLDLVAGGLMATGVILLLRER 292
>gi|39998496|ref|NP_954447.1| hypothetical protein GSU3407 [Geobacter sulfurreducens PCA]
gi|39985443|gb|AAR36797.1| membrane protein, putative [Geobacter sulfurreducens PCA]
gi|298507441|gb|ADI86164.1| membrane protein, putative [Geobacter sulfurreducens KN400]
Length = 292
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 91/284 (32%), Gaps = 13/284 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + WGIT + + QV V ++ R L ++ + L
Sbjct: 1 MNKAKAIVALLLTTFFWGITFTIVKDAVAQVDVFVFLAQRFLMAVVLLVPFCACRRVPL- 59
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ V +F L + F AL T F ++ V+ LG++
Sbjct: 60 -------TMQTVRHGLFLGLFLFGSYAFQTMALRFTTASNTGFLTGLSVVLVPMLGALLF 112
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK----TIPVGSSEG 195
++ ++ L + L ++ + L + A C + ++
Sbjct: 113 RQAVSQGIKWGVALAVPGLFLLCTNGAFVLNIGDMLAAICAVCVSLHLILTGKFARDNDV 172
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+++ L+ AL + G LI F F + + +
Sbjct: 173 WWLTAMQLSTVALLSFLVAEVGGHRTMAWHPEILWALLICAVFATVFAFLVQTSMQRFLS 232
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ P+ + + + + + T+ + +++ MV+
Sbjct: 233 PAHTALIFCLEPVFAALYAFWAADERLGTLGYLGALLILAGMVI 276
>gi|219667664|ref|YP_002458099.1| hypothetical protein Dhaf_1615 [Desulfitobacterium hafniense DCB-2]
gi|219537924|gb|ACL19663.1| protein of unknown function DUF6 transmembrane [Desulfitobacterium
hafniense DCB-2]
Length = 291
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 92/277 (33%), Gaps = 9/277 (3%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + L G + + L S L + + R + + + + KD
Sbjct: 8 LLIVVTTFLMGSSFAVVKIGLIYSSPLLLAALRFILAGGIMGIIVGVLKRTHPTTKDQWV 67
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+G + + + +L T ++ F P++ V +VFLK R
Sbjct: 68 KLLIIGAFQTAGVMGCI-----FLSLRTITASESAILTFTNPLLVVLFSTVFLKMRYRLY 122
Query: 147 QIIAALLIILSLLIMTLH---SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
Q I +L ++ + I I + ++ + A G ++ + + +
Sbjct: 123 QWIGVILGLVGVSITMGAQIEFRIGVFFGILSAVFWAIATLLTKRWGGLTDIWVLSAYQM 182
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
L V + F + + L + + F ++ Y +++ +
Sbjct: 183 LFGGLILWVGSFILETPFFTVNGTALLILLWLSLISSIVQFALWYYLLQKGEPGKTSAFL 242
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ AP +++ +L P+ +++I + +
Sbjct: 243 FLAPFFGVLTGWLLLGDPLYPSLLAGGLLIIIGIFLV 279
>gi|114564867|ref|YP_752381.1| hypothetical protein Sfri_3715 [Shewanella frigidimarina NCIMB 400]
gi|114336160|gb|ABI73542.1| protein of unknown function DUF6, transmembrane [Shewanella
frigidimarina NCIMB 400]
Length = 322
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 79/317 (24%), Gaps = 16/317 (5%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
++ E AS T +G +FV A WGI P+ + ++ + + R + +L
Sbjct: 1 MNSEQASANTRLGLIFVSIAVFFWGILPIALKLSGGFITPVTLTWFRFVMALVVTLLIQW 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + V + + + L L +
Sbjct: 61 RLGALRQFVGLPSLVWLKLLLAGVLLMCNYVSFVYSLGYLAPGTAQLNFQTAPFFLAFGG 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTI---- 188
L L +L +
Sbjct: 121 VLFFKERFNAFQLSCFATLGLGMLMFFHPQFDLNQASAHQVLLGIMIVQFSVISWTSYAL 180
Query: 189 -PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
S+ +L I AL V+ S F + ++ G + F
Sbjct: 181 LQKSISQQLSPSNVLLFIYALGIVLMAPLSDFSQFEAMTLDQWWIVLFCGANTLIAYGCF 240
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMI----------VSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + V M P+L S ID + + ++V A+
Sbjct: 241 GQALHYWPTAQVSAMLSLTPVLSFSATELVVSFGWWSGVFTSANIDVLSFMGIVLIVCAV 300
Query: 298 VVYLLPTVINSGKNKTK 314
V + + K
Sbjct: 301 FVVQIVPMYQKRKQAKA 317
>gi|300726459|ref|ZP_07059905.1| integral membrane protein domain protein [Prevotella bryantii B14]
gi|299776187|gb|EFI72751.1| integral membrane protein domain protein [Prevotella bryantii B14]
Length = 288
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/287 (13%), Positives = 92/287 (32%), Gaps = 10/287 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+P + L +WG+T + ++ L + E+ + R L++ ++F
Sbjct: 1 MPKLRHHLLAALVVFIWGVTFVNSKVLLQHGLEAHEIFTLRFLFAYICIWFISP--RRIW 58
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ +G+ S + + I + + + T + +FL V
Sbjct: 59 ADTWKEELQFFLLGITGGSLYFVTENLAVKIDYVNNVSFIVCTAPLLTTILAILFLKDVH 118
Query: 139 LKERLNHLQIIAALLIILSLLIMTL------HSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L +IA L + L + + A+ + G+
Sbjct: 119 ATRPLISGSVIATLGVALVVFNGHFILKLHPLGDLLAFLAALCWAIYSIQLRSIGRKYGA 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ L ++ +S L + L + + F ++S+ K
Sbjct: 179 IFITRKVFFYGLLTILPMFIFQPWSFSLRVLLQPVVWGNLLFLGVVASFSCFLLWSWVSK 238
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P+ +V+S +L +P+ + + +++I +
Sbjct: 239 KLGALVASNYIYLNPVSTVVASALVLDEPMTWLAYLGSALILIGVYF 285
>gi|260574867|ref|ZP_05842869.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
gi|259022872|gb|EEW26166.1| protein of unknown function DUF6 transmembrane [Rhodobacter sp.
SW2]
Length = 290
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 83/289 (28%), Gaps = 5/289 (1%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
T +G + ++ + ++ L +V V+ R + V GGL
Sbjct: 4 QNTRLGIGLMVLTSAIFAVQDGVSRHLAGEYNVYMVVMIRFWFFAAFVMLLAARAPGGLR 63
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + + V + + + + P++ L L
Sbjct: 64 RAIRSHYPLLQSLRGLLLVVEVCV----MVLGFVHLGLVPSHAVFTCYPLLVAALSGPVL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
E++ + A + L +LI+ A+ +A FA +
Sbjct: 120 GEKVGWRRWTAIGVGFLGVLIILQPGYAVFSPWALMPLLAALLFALYGLLTRYVARGDAA 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ + G + D ++ L + ++ A+ S +
Sbjct: 180 SVSFFWTGMVGALAMTCVGVWFWEPMTGADWGWMAALCCLAAAGHWCLIKALEVAEASAI 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y + + + + + + + I +VV A + L + +
Sbjct: 240 QPFAYLQLVFVAILGISLFDETLAPNMVIGAAVVVAASLFTLWRQRVAA 288
>gi|161620796|ref|YP_001594682.1| hypothetical protein BCAN_B0745 [Brucella canis ATCC 23365]
gi|163844868|ref|YP_001622523.1| hypothetical protein BSUIS_B0729 [Brucella suis ATCC 23445]
gi|225629214|ref|ZP_03787247.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254695770|ref|ZP_05157598.1| hypothetical protein Babob3T_14280 [Brucella abortus bv. 3 str.
Tulya]
gi|254699954|ref|ZP_05161782.1| hypothetical protein Bsuib55_03712 [Brucella suis bv. 5 str. 513]
gi|254711012|ref|ZP_05172823.1| hypothetical protein BpinB_12272 [Brucella pinnipedialis B2/94]
gi|254712525|ref|ZP_05174336.1| hypothetical protein BcetM6_03957 [Brucella ceti M644/93/1]
gi|256059083|ref|ZP_05449292.1| hypothetical protein Bneo5_01820 [Brucella neotomae 5K33]
gi|256111348|ref|ZP_05452374.1| hypothetical protein Bmelb3E_01905 [Brucella melitensis bv. 3 str.
Ether]
gi|256157587|ref|ZP_05455505.1| hypothetical protein BcetM4_01860 [Brucella ceti M490/95/1]
gi|256253438|ref|ZP_05458974.1| hypothetical protein BcetB_03897 [Brucella ceti B1/94]
gi|260167517|ref|ZP_05754328.1| hypothetical protein BruF5_03862 [Brucella sp. F5/99]
gi|260567995|ref|ZP_05838464.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261216182|ref|ZP_05930463.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261217343|ref|ZP_05931624.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261220562|ref|ZP_05934843.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261318596|ref|ZP_05957793.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261320216|ref|ZP_05959413.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261323030|ref|ZP_05962227.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261750433|ref|ZP_05994142.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261753691|ref|ZP_05997400.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261756933|ref|ZP_06000642.1| transporter [Brucella sp. F5/99]
gi|265986397|ref|ZP_06098954.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265992855|ref|ZP_06105412.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265996091|ref|ZP_06108648.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|161337607|gb|ABX63911.1| protein of unknown function DUF6 transmembrane [Brucella canis ATCC
23365]
gi|163675591|gb|ABY39701.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225615710|gb|EEH12759.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260154660|gb|EEW89741.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260917789|gb|EEX84650.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260919146|gb|EEX85799.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260922432|gb|EEX89000.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292906|gb|EEX96402.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261297819|gb|EEY01316.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261299010|gb|EEY02507.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261736917|gb|EEY24913.1| transporter [Brucella sp. F5/99]
gi|261740186|gb|EEY28112.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743444|gb|EEY31370.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262550388|gb|EEZ06549.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262763725|gb|EEZ09757.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|264658594|gb|EEZ28855.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 89/287 (31%), Gaps = 10/287 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S + + I G +P++ + L +V L R+ ++ +
Sbjct: 12 SSQQRWAMIALITGGIAIGSSPIFVR-LSEVGPLATGFWRLALAVLPLLLMDGRERHERK 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +A G + +L + + + P+ +
Sbjct: 71 DAAPLTLADCLRLALP--GFFIAADLGAWHLSLHSTSVANATLLANMAPIFVTIGAWLLF 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ R++ I+ ++ + ++++ G L +A + A
Sbjct: 129 RSRVSSSFIVGLVVAVAGVIVLKGGPGELLHSRSSGDAMALLAAVFYAGYILSVGRLRSR 188
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + AI A+F + F G + L ++ + +Y +
Sbjct: 189 FSTMRIMLWSSAIAAIFSLPVAYFMEGHILPATLYGWLVLAGLAWLTHAAGQSMIAYALA 248
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + P++ + IL +PI ++ I IV+ +++
Sbjct: 249 FLPASFSSLTLLLQPVVAAFLAWTILSEPIGLMQAIGGVIVISGILI 295
>gi|317407281|gb|EFV87257.1| hypothetical protein HMPREF0005_05537 [Achromobacter xylosoxidans
C54]
Length = 304
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 82/284 (28%), Gaps = 15/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
LF A + W + ++ +S + +R++ +L +
Sbjct: 3 YLFPLFAILFWAGNVIVSKMAASAISPTAITFYRLILALAIMGLFTAV----PVWRNRKT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ ++ A AV A T + + P++S+ L V L++ L
Sbjct: 59 ILRHWPKLALYGALSSAVFQALSYRAAETTTATNMAILTALIPLLSMLLSVVILRDPLTL 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA----------IAVTWSAYCFARKTIPVGSSEG 195
L L LL + + + +A A
Sbjct: 119 GMAAGGALSFLGLLYLVGQGNMLSVFQHGIHVGDGLMLMAAFSYALYGVLLRHWKVPVPA 178
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ L+ + L L L + + ++ G+ R
Sbjct: 179 WQSTFVQSIFALLYMLPLYLRVPAAQAALDMKTIPLILYAGIFSSVLLSFLWIEGVHRLG 238
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ I PL +++ +L++ + + + + + +++
Sbjct: 239 PNRCSIFINLLPLFTALAAFVLLREQLRSYHLLGGAVTLAGVLL 282
Score = 37.6 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 41/135 (30%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
+ L A+ + A + + I L + ++ +
Sbjct: 1 MSYLFPLFAILFWAGNVIVSKMAASAISPTAITFYRLILALAIMGLFTAVPVWRNRKTIL 60
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+ L ++ + + + + I+ PLL ++ SV IL+ P+
Sbjct: 61 RHWPKLALYGALSSAVFQALSYRAAETTTATNMAILTALIPLLSMLLSVVILRDPLTLGM 120
Query: 287 TIVFGIVVIAMVVYL 301
+ + ++ +
Sbjct: 121 AAGGALSFLGLLYLV 135
>gi|224436777|ref|ZP_03657775.1| hypothetical protein HcinC1_02424 [Helicobacter cinaedi CCUG 18818]
gi|313143267|ref|ZP_07805460.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128298|gb|EFR45915.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 90/297 (30%), Gaps = 4/297 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
S G L + + +L+ + + L + +EV R + + +
Sbjct: 1 MSANLTQGILAMLFSSLLFALMGAEAKILSLTLPSMEVAFFRSFLMVLFLLPLCLSKPMK 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
K + + +A+ + +L F S +V + +FLG
Sbjct: 61 KPSHKKGGYVFLLSRSIAGGLSFVALFYNIATISLGNATAFSQSMPLYVVLLSFLFLGEK 120
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF---ARKTIPVGSSE 194
F + I ++++ ++ + + A F S
Sbjct: 121 FHLGVVLSTIIGFCGILLICNPNFNAMGLENVIFGISSALFMAVAFLNLRALKDYFSSWV 180
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F +++ L V + + + D L +I GL + + A
Sbjct: 181 PVFATGVAMSVITLIVSVAQIPLFAQSWAMPQGIDWLHIILLGLFGTLGQHYLTKAYMSA 240
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
V ++Y + ++ V + + + ++++ + LP ++ K
Sbjct: 241 PAGIVAPIDYMRLVFSVILGVLLGDNLPNLATSFGIMFIILSGIGVGLPPLLVDMKK 297
>gi|121594840|ref|YP_986736.1| transporter DMT superfamily protein [Acidovorax sp. JS42]
gi|120606920|gb|ABM42660.1| RarD protein, DMT superfamily transporter [Acidovorax sp. JS42]
Length = 300
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 7/291 (2%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL-- 81
+ G + A +L+G L + ++ RVL +LP ++ +
Sbjct: 2 IQGLVASIVASVLFGAMYYLAPALAPLDGEQIFGWRVLCTLPFTTALLLARGQWPGVRLL 61
Query: 82 -KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ P L+ SA +L V F++A L + S YF+ P++ V G V +
Sbjct: 62 AARAWRQPLLALGLLASAAMLGVQLWLFLWAPLHGRALPVSLGYFLLPLVMVLAGRVLYR 121
Query: 141 ERLNHLQIIAALLIILSL-LIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL+HLQ +A L + + G+ + +A+ ++AY R+ + G +++
Sbjct: 122 ERLSHLQWLATALAGAGVLHEVLRAGGMSWETWLVALGYTAYFVMRRRLGTDHLGGHWLD 181
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M +L AL++VV S + G+L++ ++ + L
Sbjct: 182 MLLLVPAALWFVVRAPSSLPLVLEH--AHLWAMVPVLGVLSAVALALYMAASRLLPLGLF 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
G++ Y P+L+ + L + I + +G + A+ + +L + +
Sbjct: 240 GLLSYVEPVLLALV-ALALGESIGAAQWPTYGPIFAAVALLVLDGALRLRR 289
>gi|32266999|ref|NP_861031.1| hypothetical protein HH1500 [Helicobacter hepaticus ATCC 51449]
gi|32263051|gb|AAP78097.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 289
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 77/260 (29%), Gaps = 13/260 (5%)
Query: 47 LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWG 106
L +S L + +R++ +LP +F S+ + ++ + A
Sbjct: 30 LTDMSPLNLAFYRIILALPIFWFMAHLKHNIFSIPLKDIS------LMFVAGVFFAFDLL 83
Query: 107 FFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG 166
FF AL + + I + +G +F KE++ + I+ + ++ G
Sbjct: 84 FFNLALRHTSVANVNLFASLACFILIPIGIIFFKEKIKKSFFFGGFVAIIGVFVLMGGKG 143
Query: 167 -------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGG 219
++V + F I + ++ + G
Sbjct: 144 ALSVATPYGDFMAFLSVLCYSCFLGVIYSLRRKYGTFEIMLFACVGSSIVLLALVLIFEG 203
Query: 220 EHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILK 279
+ ++ F+Y + + T + AP++ L
Sbjct: 204 FEVPKDTKDWGIVVLIALCGQVIGQGFFNYIMGKVNTQTSSFLLLFAPVIAAFMGFLFLG 263
Query: 280 QPIDTVRTIVFGIVVIAMVV 299
+ + I++ + +
Sbjct: 264 EHLGIYEICGIVIIIFGVYI 283
>gi|70725314|ref|YP_252228.1| hypothetical protein SH0313 [Staphylococcus haemolyticus JCSC1435]
gi|68446038|dbj|BAE03622.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 86/289 (29%), Gaps = 12/289 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+ + I G + ++L E V + + R + + + G +L
Sbjct: 12 YICIILTTICMGSSFPTGKYLISIEHVPPMLLGGWRFTIAGFIILLVLFLKRGVKYVLPS 71
Query: 84 TLKNPKAVGMLVFSATILAVHWGF---FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
N + V + +L I L +++ F P+ L LK
Sbjct: 72 IDHNSYKGFIFVATIGLLQTAGTMGLLNIAMSLGVSSSMSAVLLFTNPLWLAVLAHFILK 131
Query: 141 ERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
ERL ++++A ++ ++ + I L G + L ++ +
Sbjct: 132 ERLTMIKVVALVIGVIGVTICLGLDRSLLGWGACVALLGSLCWSCNTVVTKQFKFDKGAW 191
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ +F + L F + F ++ +
Sbjct: 192 VLTGWQLLFGGIIMFLISQLLGERYHIGQLNGWGWVWFWWLVFPASIGSFGLWFSSLNLR 251
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + PLL + S+ L +P I VV+A++
Sbjct: 252 GATISSSFLFLVPLLSTIFSIIGLGEPFTLHIMIGGLCVVVALIAINYS 300
>gi|253730457|ref|ZP_04864622.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253725787|gb|EES94516.1| DMT superfamily drug/metabolite transporter [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 290
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 89/277 (32%), Gaps = 14/277 (5%)
Query: 31 FCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
ILWG + L S + + R++ + + ++ L+D
Sbjct: 13 LFTIILWGSAFPMIKIALNDFSAESLSAFRLILATIILLPFVIIKKLPTPELRD------ 66
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ + ++ + ++ TP+ S L +FLKE + +
Sbjct: 67 IPVIFILGFCGFVIYHTALNFGETLISAGISGILVSTTPIFSSALAYIFLKEHFSKWNWL 126
Query: 150 AALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++L+ + + I+++ + A + F + + +
Sbjct: 127 SSLVAFIGIFIISISKDDYTTINVLGVLIILLASFSESLYFTFQKKYIEKYGFIAFTLYT 186
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
+ + F +++ + L + + +Y +K +S +
Sbjct: 187 IMASSPFMLIFIPEIINDIHGATFTSIVSVLYLAIFPTIIPYVLLAYIVKSVGVSDATMS 246
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
Y P++ ++ S L + T+ I I ++ + +
Sbjct: 247 LYLTPIVSLLLSYLFLDELPTTLAIIGGIITLLGVSL 283
>gi|294655836|ref|XP_458034.2| DEHA2C08140p [Debaryomyces hansenii CBS767]
gi|199430644|emb|CAG86097.2| DEHA2C08140p [Debaryomyces hansenii]
Length = 436
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 76/287 (26%), Gaps = 33/287 (11%)
Query: 26 GTLFVFCAYILWGITPLYTQFL-------EQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G + + + I + L + L+++ R++ + +
Sbjct: 79 GISLLILSQLFNSIMITTCKLLITDKEFETPIHPLQILFARMIITYICCVVYMFVTKC-- 136
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K +L Y+L F+ P+++ FL V
Sbjct: 137 -VPDAPFGPKKLRNLLFMRGAFGFFGVFGLYYSLQYLSLSDAVAITFIIPMVTAFLAWVI 195
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV---------------------- 176
L ER + ++ ++ + ++++ + I S
Sbjct: 196 LHERYSLIEAACGVISLGGVILIAKPNFIFGESELSGDDSIESSSTEKRLLASGVGLIGV 255
Query: 177 -TWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIG 235
S+ + I + + L + ++ N
Sbjct: 256 LGASSVYIILRKIGHEAHPLLSVSYFALTCVLISFISLISLPSLSFAVPQNNYQWFLFFL 315
Query: 236 YGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
G+ + + G++R +M YT + I+ +
Sbjct: 316 IGIFGFLMQFSLTAGVQRVNAGRAALMSYTNMVFAIIWDLIFWGHLP 362
Score = 45.7 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 42/149 (28%), Gaps = 2/149 (1%)
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
+ I L S+ I P+ + F M + I + Y+
Sbjct: 78 VGISLLILSQLFNSIMITTCKLLITDKEFETPIHPLQILFARMIITYICCVVYMFVTK-- 135
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
G L G F Y ++ LS + + P++ + I
Sbjct: 136 CVPDAPFGPKKLRNLLFMRGAFGFFGVFGLYYSLQYLSLSDAVAITFIIPMVTAFLAWVI 195
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
L + + I + +++ P I
Sbjct: 196 LHERYSLIEAACGVISLGGVILIAKPNFI 224
>gi|119945817|ref|YP_943497.1| hypothetical protein Ping_2155 [Psychromonas ingrahamii 37]
gi|119864421|gb|ABM03898.1| hypothetical transmembrane protein DUF6 [Psychromonas ingrahamii
37]
Length = 307
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 93/302 (30%), Gaps = 17/302 (5%)
Query: 14 LSKENASLPTMM-GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
+S N S + G V A ILWG T F Q+S L + + +
Sbjct: 1 MSLNNISEKQIKNGRFAVLLAAILWGTTGTVASFAPQLSPLAIGAFAMGIGGLLQAMIAR 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
T+K +G L + LA + + + + F T ++
Sbjct: 61 KKLISDIDKLLTVKRELLIGALAVAIYPLAFYTAMQFSGITIGTVISIATAPFATVLLER 120
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWS 179
L + ++ L ++ ++++T G+ +A
Sbjct: 121 LLSKKNHMD---RRWQVSVGLGVIGVVLLTYSEGMSAQYDQQNALKFIGALLGLLAGLTY 177
Query: 180 AYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLL 239
A + M L ++ + F GE+ F + +
Sbjct: 178 AIYSWVARSLIEKGIQSESAMGSLFALGAAILIPSLFFTGENLFSNLNNILVVSYMALVP 237
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ F +G++ S ++ P++ V +V ++ + I + +++ + +
Sbjct: 238 MFIGYLAFGFGLRYVHASRATLLTLFEPVVAAVLAVSVVGEHIAFSGWLGMLLIITCLFL 297
Query: 300 YL 301
Sbjct: 298 QT 299
>gi|170681707|ref|YP_001743287.1| hypothetical protein EcSMS35_1225 [Escherichia coli SMS-3-5]
gi|187731517|ref|YP_001879613.1| hypothetical protein SbBS512_E0924 [Shigella boydii CDC 3083-94]
gi|193066645|ref|ZP_03047680.1| carboxylate/amino acid/amine transporter [Escherichia coli E22]
gi|194430441|ref|ZP_03062924.1| carboxylate/amino acid/amine transporter [Escherichia coli B171]
gi|209919380|ref|YP_002293464.1| hypothetical protein ECSE_2189 [Escherichia coli SE11]
gi|218554539|ref|YP_002387452.1| hypothetical protein ECIAI1_2040 [Escherichia coli IAI1]
gi|218699480|ref|YP_002407109.1| hypothetical protein ECIAI39_1097 [Escherichia coli IAI39]
gi|260844357|ref|YP_003222135.1| putative inner membrane protein [Escherichia coli O103:H2 str.
12009]
gi|300923875|ref|ZP_07139891.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
182-1]
gi|331668649|ref|ZP_08369497.1| putative transmembrane subunit [Escherichia coli TA271]
gi|170519425|gb|ACB17603.1| carboxylate/amino acid/amine transporter [Escherichia coli SMS-3-5]
gi|187428509|gb|ACD07783.1| carboxylate/amino acid/amine transporter [Shigella boydii CDC
3083-94]
gi|192925720|gb|EDV80379.1| carboxylate/amino acid/amine transporter [Escherichia coli E22]
gi|194411520|gb|EDX27859.1| carboxylate/amino acid/amine transporter [Escherichia coli B171]
gi|209912639|dbj|BAG77713.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218361307|emb|CAQ98891.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|218369466|emb|CAR17231.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
gi|257759504|dbj|BAI31001.1| predicted inner membrane protein [Escherichia coli O103:H2 str.
12009]
gi|300419872|gb|EFK03183.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS
182-1]
gi|315296463|gb|EFU55760.1| Carboxylate/Amino Acid/Amine Transporter [Escherichia coli MS 16-3]
gi|320184497|gb|EFW59301.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Shigella flexneri CDC 796-83]
gi|320194329|gb|EFW68960.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Escherichia coli WV_060327]
gi|323158563|gb|EFZ44577.1| carboxylate/Amino Acid/Amine Transporter family protein
[Escherichia coli E128010]
gi|324119007|gb|EGC12896.1| carboxylate/Amino Acid/Amine transporter [Escherichia coli E1167]
gi|331063843|gb|EGI35754.1| putative transmembrane subunit [Escherichia coli TA271]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 85/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGALFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLMAFLLLRGHKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ L +L+ + + + F S G
Sbjct: 63 PPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL-CFSRLFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + + + + Y I+ +
Sbjct: 182 AIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + + + G++V A+V+ L + K
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAK 293
>gi|319783610|ref|YP_004143086.1| hypothetical protein Mesci_3920 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169498|gb|ADV13036.1| protein of unknown function DUF6 transmembrane [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/299 (13%), Positives = 90/299 (30%), Gaps = 9/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
P + G LF+ A + + T++ Q +++ +V+ R ++ V
Sbjct: 4 SPNLRGALFMMVAMAGFTLNDAITKYSSQSMNMAQVMLIRGAFASLFVGLLA------WQ 57
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ A F+ AL S P+ ++
Sbjct: 58 RGALARPGSMLQPLVALRVISEAGATVSFLVALAHLPIANVSAVLQALPLAVTMGAALVF 117
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE--GFF 197
E + + +A + +LI+ +++ S C A + +
Sbjct: 118 GETVGWRRWLAIAIGFAGVLIIVRPGFEGFSVYSLSALASVACCAVRDLATKRIPKAIPT 177
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + A+ V + T L +L + ++ +S
Sbjct: 178 LLVSTATALAMTIVGAALLPAMGGWTPMTGNSTALLALAAVLVIIGYQFIIMAMRAGDIS 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ YTA + I+ +FI D + I++ + + L + + +S
Sbjct: 238 FIAPFRYTALIWSILLGLFIFADIPDLPMIVGATIIIGSGLYALYRERVVGRRKIVAES 296
>gi|259417011|ref|ZP_05740931.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259348450|gb|EEW60227.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 325
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/315 (14%), Positives = 105/315 (33%), Gaps = 21/315 (6%)
Query: 14 LSKENASLP-----TMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGV 67
+S+ +A+ P ++G + L + + L + V +++ R +
Sbjct: 1 MSQTSAATPDTMDRPLLGIALMLGFCALIPLGDAVAKLLSTRIPVGQIVFVRFAAQGIIL 60
Query: 68 FFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVT 127
+ L L + +L + AL FV
Sbjct: 61 APVALMLGISLRLPARIMPIVLLRTVLQMAGI------TAMFMALRFLPLADAVAIAFVM 114
Query: 128 PVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
P I + LG LKE + +++A ++ + L++ S + A+ A FA
Sbjct: 115 PFIMLLLGKYVLKEDVGLRRLLACIVGFIGTLLVIQPSFAAVGLNALWPLAVAVIFAVFM 174
Query: 188 IPVG---------SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ + + + + + LF + + L P+ L+ G+
Sbjct: 175 MVTRTIARETDPIAIQAVSGGIACVLMAGLFALGAQFELKELNTALPARPEVNLLLLAGV 234
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
L + + ++ ++ A ST+ M+Y + + + +T+ T + + A +
Sbjct: 235 LGTIAHLLMTWSLRYAPTSTLASMQYLEIPVAVFVGWLFFSELPNTIATCGIALTMAAGL 294
Query: 299 VYLLPTVINSGKNKT 313
++ S +
Sbjct: 295 YAVMRERSVSRAARK 309
>gi|315498467|ref|YP_004087271.1| hypothetical protein Astex_1453 [Asticcacaulis excentricus CB 48]
gi|315416479|gb|ADU13120.1| protein of unknown function DUF6 transmembrane [Asticcacaulis
excentricus CB 48]
Length = 297
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/283 (9%), Positives = 72/283 (25%), Gaps = 6/283 (2%)
Query: 34 YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
+WG + L+ + + + + +I+ RVL + + V L +
Sbjct: 13 AAIWGGSFLFMRLSVGALGPVWLIAIRVLLAAVFLTGVGVATRKTLQIKGFYKYFLILGL 72
Query: 93 MLVFSATILAVHWGFFI-----YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L + L V + +VF
Sbjct: 73 FNSVVPFVLFAFAAESLTASLLSILNAMSPLFAVIIMAVWSRRMPDIKTVFGLLLGVAGV 132
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+ L L + + + L A+ ++ M +
Sbjct: 133 GVLVGLDATHLTLREAVALLAGLVAALCYAIASVYARHAPRTPDPLSNAHGGMWASVVLI 192
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+V + + L + + + + + I+ I + + + P
Sbjct: 193 APFVPVLAPTTTQLMTLTPVAAAGVVALGVVCSGIAYMIYFRLINDIGAAPALTVTFLIP 252
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ + L + + I +V+ + + +
Sbjct: 253 VFGTLWGWLFLHETVGLSTLIGGALVLWGTALVVGFDPRALFR 295
>gi|168212758|ref|ZP_02638383.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
gi|170715803|gb|EDT27985.1| putative membrane protein [Clostridium perfringens CPE str. F4969]
Length = 310
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 80/279 (28%), Gaps = 8/279 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYF-SGG 77
G V A + WGI + ++ L +S + + R S F I+
Sbjct: 2 NNKQKGISLVLIATVFWGIMGISSRILYEAGLSTMFIAFSRSFLSSICFFIWIMITDRKI 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + L G+ F+ + + + + + S +VT +F G
Sbjct: 62 LKIDPRGLAISALYGIGTFALCFIGYNLSVEYIPISVATVLMFTNSIWVTIFGVLFFGEK 121
Query: 138 FLKER-----LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F ++ L + I + L M+ L + +
Sbjct: 122 FNMKKGSVILLTLVGCIMVSNMSLGHFNMSAVGIAAGLGTGFLFAFQIIFPKFFSGYRKD 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + LF F + + L L + +
Sbjct: 182 TLLIYGYIFASIFIGLFTDFKESFDIIANAPNIGVVILNILSIGILSTFISNTFYIKSTE 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ S I+ P+L + + FI + ++ + +
Sbjct: 242 YIEASVTSILASMEPVLSSIFAFFIFGEVLNGKQIVGAI 280
>gi|332798394|ref|YP_004459893.1| hypothetical protein TepRe1_0384 [Tepidanaerobacter sp. Re1]
gi|332696129|gb|AEE90586.1| protein of unknown function DUF6 transmembrane [Tepidanaerobacter
sp. Re1]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 87/287 (30%), Gaps = 14/287 (4%)
Query: 28 LFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ +F + WG+ + + L ++ L + R + S + +
Sbjct: 9 IALFFVALGWGLNFVVEKKSLTMITPLMYLGLRFILSALLMAVIF--------HKQLKNI 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + + + + L+ + F V+ FL KE
Sbjct: 61 TKEDIKGGLIIGLFVLLGFVTQTVGLVYTTPSKSGFITGSNVVMVPFLAYFITKEFPQLN 120
Query: 147 QIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
QI+ A++ + L +++ G + + A V S I
Sbjct: 121 QIVGAIITFVGLGFVSIDENLVIGWGDILTLLCALCFALQITFTEYYVKKSNPINIAFIQ 180
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDT-LFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+A+ + + ++ L G + F + + K + +
Sbjct: 181 IALTGIITMGIAIIQEPAISLSYDLEIWGSILFGAVFCTAGAFAVQNVAQKYTNSTHAAV 240
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ T + + S +P+ + F +V+ +++ + +
Sbjct: 241 ILCTESIFAGIFSYLFWGEPLALKTVVGFVLVLAGVLITEIVPARAT 287
>gi|325961945|ref|YP_004239851.1| permease, DMT superfamily [Arthrobacter phenanthrenivorans Sphe3]
gi|323468032|gb|ADX71717.1| putative permease, DMT superfamily [Arthrobacter phenanthrenivorans
Sphe3]
Length = 325
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/295 (12%), Positives = 86/295 (29%), Gaps = 17/295 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
AS T +G + +LW + + + S + R+ V
Sbjct: 17 ASRVTALGVAAMVVTVVLWASAFVGIRAIGPHFSPGSLTLGRL---AIAAVVLAVLVLPQ 73
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + + +L + + A ++ V P++ + V
Sbjct: 74 LLKSRLLPRGREWWPILAYGVMWFGGYNVALNAAEHVLDAGTSALLINVNPILVAIMAGV 133
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGI-------------PLLSLAIAVTWSAYCFA 184
FLKE II +L+ + ++ S +L +A +A
Sbjct: 134 FLKEGFPRWLIIGSLVAFAGVALIAFGSSQASTPGERPTADMAGVLLCLLAAVLAAVSVI 193
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ + + + AL + + G E + + F
Sbjct: 194 IQKPVLRKFPAAQATWFGILVGALCCIPFAGQLAAELQAAPAQATWGLVYLGIFPTAIAF 253
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++Y + + Y P I+ S +L + + + + ++ + +
Sbjct: 254 TTWAYALSLVDAGKLAATTYLVPGTTILISWLLLGEIPTVLGLVGGLVCLVGVGL 308
Score = 38.0 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 8/80 (10%), Positives = 21/80 (26%)
Query: 229 DTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTI 288
L + + T ++ P+L+ + + LK+ I
Sbjct: 86 WWPILAYGVMWFGGYNVALNAAEHVLDAGTSALLINVNPILVAIMAGVFLKEGFPRWLII 145
Query: 289 VFGIVVIAMVVYLLPTVINS 308
+ + + + S
Sbjct: 146 GSLVAFAGVALIAFGSSQAS 165
>gi|320335801|ref|YP_004172512.1| hypothetical protein Deima_3220 [Deinococcus maricopensis DSM
21211]
gi|319757090|gb|ADV68847.1| protein of unknown function DUF6 transmembrane [Deinococcus
maricopensis DSM 21211]
Length = 281
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/279 (10%), Positives = 82/279 (29%), Gaps = 16/279 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + + + ++ + +V + + L +V ++ +
Sbjct: 1 MLLALGSALAFSSLAVWGKLAGEVGLATYTLLPWRFGLVAAALFLVAGGRAPLGVRARML 60
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
S + ++ + AL T +++P V ++ ++
Sbjct: 61 ---------GSGVLYSLATTCYFLALARITAGATGLLLYLSPAFVVLFAALLGRK-PARA 110
Query: 147 QIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
Q+ L ++ L ++ G L + + +
Sbjct: 111 QLAGVALAVVGLAVVIGLPGAGDRDATGLAFGVLTGALYGAYLLYAERFLKDTPPLQTTA 170
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ + A+ + + +G G + L I R +
Sbjct: 171 HMSLVAAVVFALLGAGTGTLDVPRGLDAWGVVLATAIFPTLLAVPTLYAAITRLGAARAS 230
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ T PL ++ + +L +P+ I G++++ +V
Sbjct: 231 VLATTEPLWTVLLAALVLHEPLRPAVLIGGGLILVGALV 269
>gi|294635542|ref|ZP_06714022.1| membrane protein [Edwardsiella tarda ATCC 23685]
gi|291091111|gb|EFE23672.1| membrane protein [Edwardsiella tarda ATCC 23685]
Length = 311
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 95/297 (31%), Gaps = 12/297 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G +V A LWG + + Q++ +S + R+ +S + +
Sbjct: 5 RQGMGYVLIAAALWGSSGVCAQYILQKTGLSAQWLTMFRLTFSGGILLVVSFLNGD--KV 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + +L F+ + F+ + + F++P I V ++ +
Sbjct: 63 FAPLTRRRDLLSLLWFTLLGAIMVQLTFLMTIERSNAATATVLQFLSPTIIVAWFALARR 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS-------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+R + +A + ++ H L IA +++ + + +
Sbjct: 123 QRPSLAVTLAIATSLAGTFLLVTHGDPTSLTISRAALFWGIASAFASAFYTTYPAGLIAR 182
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
G + + ++ + + + + F ++ G +
Sbjct: 183 FGTLPIVGWSMLLGGLMLMPFFAGETAQVRMDSATLLAAFYLIIIGTALTFSLYLKGAQI 242
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
+ GI+ PL + S+ +L + + +++ ++++ GK
Sbjct: 243 IGGAKAGILSCAEPLCSALLSLLLLGITFGVMDWLGSLLIIASVLLISRDARTREGK 299
>gi|229515878|ref|ZP_04405336.1| permease [Vibrio cholerae TMA 21]
gi|229347141|gb|EEO12102.1| permease [Vibrio cholerae TMA 21]
Length = 303
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 83/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSAIALLVICGAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ + IA L ++++ L PL ++ +
Sbjct: 119 GQRIRNQDWIACALSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPILGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQWQGRKAQ 295
>gi|229541433|ref|ZP_04430493.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
gi|229325853|gb|EEN91528.1| protein of unknown function DUF6 transmembrane [Bacillus coagulans
36D1]
Length = 320
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/319 (10%), Positives = 92/319 (28%), Gaps = 29/319 (9%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
G L++ + I + + + + +++ R + +
Sbjct: 2 KKGILYIVLSAIFFSTMEIAIKMVAGTFHPIQLNLLRFFIGAVILSPLAF---QHMKKYH 58
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + +V + + F+ A++ + + + P+ + L LKER
Sbjct: 59 FHMTKDSFLFFVVTGFLCVVISMTFYQLAIVYTKASTVAILFSCNPLFVIPLAHFLLKER 118
Query: 143 LNHLQIIAALLIILSLLIMTLHS------------------------GIPLLSLAIAVTW 178
L+ ++A + ++ +L + G
Sbjct: 119 LSKRTLVALGISLVGILFIVNPFEIQSPFGIIVALLSAVTFALYSVVGRKGSQQFKCDGV 178
Query: 179 SAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG-GEHFFLGNIPDTLFLIGYG 237
C + T + I L V F+ + +
Sbjct: 179 ILTCLSFFTGSIEILALVLISKIGFVAGWLRSVGLGVFANVPVFRGIAWHTLPSLIYIGI 238
Query: 238 LLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ F + + S ++ + P L + ++ L++ I T+ ++V
Sbjct: 239 FVTGLGFAFYFLAMDVTSASMASMVFFIKPALAPILALIFLREAITPAVTVGIILIVAGS 298
Query: 298 VVYLLPTVINSGKNKTKKS 316
++ LLP + + ++
Sbjct: 299 LMTLLPAGSKQPELRVSRA 317
>gi|315634205|ref|ZP_07889494.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
gi|315477455|gb|EFU68198.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
Length = 293
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/288 (8%), Positives = 79/288 (27%), Gaps = 7/288 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ + + + + AYI + ++ ++ + E++ R L + ++
Sbjct: 1 MPNKIITSSYHKAIICMVLAYISIALMGVFVKYASDELPASEILFSRFLIGFVFLLPFMI 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
++ +++ + + F + V
Sbjct: 61 RDGDFRVEMRQWP------FLVIRNLAGIGSMLCTFYAIKYLPLSISILLLNTSALFVPV 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L + + L + I ++++++T H G A A I +
Sbjct: 115 LLFLLRTRTPLKVIACSVLGFIGVAIILLTDHHGEVEPYYIFVALGGATLAAMAFISLQE 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ L + + L L+ G + + K
Sbjct: 175 LNKHNSPKNIVFYFHLLGAILLPLFFMAQWTLPTAHGLFMLLLVGGFGLIFQLLLTRAFK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
A + + +T + + + + ++++++ +
Sbjct: 235 YAPANVITPFAFTGVIFSSICDWLFWQNVPTVHFWLGSLVIIVSVSLL 282
>gi|310816535|ref|YP_003964499.1| integral membrane protein, putative [Ketogulonicigenium vulgare
Y25]
gi|308755270|gb|ADO43199.1| integral membrane protein, putative [Ketogulonicigenium vulgare
Y25]
Length = 290
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/295 (8%), Positives = 73/295 (24%), Gaps = 7/295 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ + + A + + + + Q I V +S V
Sbjct: 1 MNNFRAAILLTLAMAGFAVEDVMFKLANQSLPQGTILTIVGFSGALVLAIAATIRRENVF 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+D + + L + V ++FLG
Sbjct: 61 SRDFFHPFVILRNVTEMIGTACFVMAITTVPLTLASAVAQALPLAVMAGAAIFLGEK--- 117
Query: 141 ERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + A + + ++++ G + +L A +
Sbjct: 118 --VGWRRWAAVGVGFIGVMVIVRPGLEGFNVSTLWAVAAVMAMAVRDVITRRVPDHIASL 175
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + + + L ++ + + ++S
Sbjct: 176 PVASWGFMFAGFAGLVIAAAQGELPVPQGMQWLPVMTSMTAGIGAYVALIISSRIGEISA 235
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKT 313
V YT L ++ + + DT + ++V + + + + ++
Sbjct: 236 VIPFRYTRLLFAMILGALVFGERPDTWTLVGSALIVGSGLYAIYRERKRVREARS 290
>gi|225873811|ref|YP_002755270.1| membrane protein [Acidobacterium capsulatum ATCC 51196]
gi|225792561|gb|ACO32651.1| membrane protein [Acidobacterium capsulatum ATCC 51196]
Length = 321
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/307 (10%), Positives = 90/307 (29%), Gaps = 12/307 (3%)
Query: 15 SKENASLPTMMGTLFVFCA-YILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIV 72
S + + P + L F + Y WG T + + + R+L +
Sbjct: 3 SSSSHAGPARLAVLLAFGSVYFFWGATYTAMSIGVHLLPAPILAGTRMLIGAALMLLFCK 62
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ + + +G+++ + + W A + +V + +V
Sbjct: 63 LRGKKIFYSRGVMARLGLLGVMLLFMGNVGLVWSEKYLASGLAALIVAIVPLYVAVIEAV 122
Query: 133 FLGSVFLKERLNHLQIIAALL----------IILSLLIMTLHSGIPLLSLAIAVTWSAYC 182
G + L L + L +L ++ ++ L A+++++
Sbjct: 123 TGGEQLRRRGLFGLFLGFLALIALLWPSFHEALLPRHGSSMQIIAAIIVLLGALSFASGS 182
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + + + A V+ H +
Sbjct: 183 VLSRHMQLPVPPLVAAGWEMGAAGLANVVLATATWQWPHATWNWHSLAAIGYLILFGSLL 242
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F + + I ++ V Y P++ ++ V +L + + V+ ++ +
Sbjct: 243 GFSCYIWLIHHVPVAKVATYAYVNPVVAVILGVLVLHEHMQPTEYFGMVAVIASVALVTS 302
Query: 303 PTVINSG 309
+ +
Sbjct: 303 SQMKSGK 309
>gi|154175350|ref|YP_001407423.1| hypothetical protein CCV52592_1481 [Campylobacter curvus 525.92]
gi|112803260|gb|EAU00604.1| integral membrane protein DUF6 [Campylobacter curvus 525.92]
Length = 294
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 91/287 (31%), Gaps = 13/287 (4%)
Query: 28 LFVFCAYILWGITPL-YTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ++WG+T L Q L V ++ R L + + + F +
Sbjct: 13 LALVAVAVVWGVTFLPMAQALHTNGVFTLLFWRFLLAFFLMVLISLAFVRKI-------- 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ ++ L + F +AL +F + V F+ +F K+++
Sbjct: 65 DANSIKYGAILGAFLFAGFAFQTFALKYALSSSVAFITGLNVVFVPFIVFLFFKQKVYIY 124
Query: 147 QIIAALLIILSLLIMTLH----SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
A L + L ++ LLS+ A+ ++ + M
Sbjct: 125 SFAGAFLSTIGLYFLSSGEFGLGLGELLSVICALAFALQIVFTGIFVKRCELYVLVCMQF 184
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L I AL + F G +I F F + + + ++
Sbjct: 185 LTICALSLICAVVFEGTAMPNFDAEFYKAVIITAVFATVFAFFVQNAMQRYTTPMKTSLI 244
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P+ V F+ + ++ +++ +++ + + +
Sbjct: 245 FTLEPVSAGVLGYFVGGERFSALQIGGALVILAGILLSEIGSYYKNK 291
>gi|325283806|ref|YP_004256347.1| hypothetical protein Deipr_1592 [Deinococcus proteolyticus MRP]
gi|324315615|gb|ADY26730.1| protein of unknown function DUF6 transmembrane [Deinococcus
proteolyticus MRP]
Length = 292
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 97/288 (33%), Gaps = 18/288 (6%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L A ++WG T L T F+ ++ L + + R+L + + +
Sbjct: 5 LLLTALAPLIWGTTYLLTTTFVSELPALLLGTLRILPAGLVLLAL----------SRRLP 54
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + V + A+ + A L G + + + ++ V L L +
Sbjct: 55 PHGWWGRVAVLAVLRQALFFVLLYGAALHLPGGVAATVGASSAMLVVLLAWPLLGQAPTR 114
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR-------KTIPVGSSEGFFI 198
L + A + + +++L G L +L +A+ + P +
Sbjct: 115 LNLTLAGAGLAGVALISLSGGERLSALGLALALGFALVNALGTVLFGRWGPPPGARPLDQ 174
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
L + + + + + + + ++ G+ R +
Sbjct: 175 VAWELTLGGALLLPFALPAAPALAGVDLAGWGALTFMTLVGTALAALLWQRGLNRLPVQQ 234
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
VG++ +PL ++ + L + V+ + +V+ ++V+ +
Sbjct: 235 VGLLAPLSPLTAVLLDMLFLHTWLTPVQLVGAALVLGSVVLNGVAARR 282
>gi|296391665|ref|ZP_06881140.1| hypothetical protein PaerPAb_26089 [Pseudomonas aeruginosa PAb1]
Length = 284
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A + + + + E++ R ++ +
Sbjct: 9 GVLLAVLASFTFSVMNALVKEASTTLPAAEIVFFRSAIGTLLIYLLM--------RQAGV 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + V ML+ + A++ + YA+ S ++P + ++FL ER+
Sbjct: 61 ALSRQGVPMLLVRGVMGALYLVCYFYAIAHIPLADASILAHMSPFFVILFSALFLGERIP 120
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L+++L L++ S+ V + FA +
Sbjct: 121 RAVYWLLLVVVLGALMIVKPFSYSSYSVYAVVGLLSAVFAAGASVAIRQLSARHHTYEIV 180
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPD--TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + F+ L+ G+++ + + V +
Sbjct: 181 FYFLAVATLVAIPLMWNDFVVPATLREWGLLLAIGVVSLLGQVFLTRAFSHESATIVAVT 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y + + D + ++V+A +
Sbjct: 241 RYIGIVFNAGWGWLFWSEVPDALTIAGGVLIVVACIALS 279
>gi|262404071|ref|ZP_06080626.1| permease [Vibrio sp. RC586]
gi|262349103|gb|EEY98241.1| permease [Vibrio sp. RC586]
Length = 288
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/268 (8%), Positives = 81/268 (30%), Gaps = 11/268 (4%)
Query: 45 QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVH 104
Q ++++ I R++ + + + + + + A
Sbjct: 28 QAIQELPPFGFIGLRLIAASLCLLPFCLGALK-------QASRQACLQSMGVGLLLAASL 80
Query: 105 WGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH 164
+ + ++ +F ++ + L +R ++ + ++ L ++ +
Sbjct: 81 FCWIHAISISDTLGEGAFIMSLSMLFVPLLAWPIFGQRPIRAFWLSLPVAVIGLFLLAWN 140
Query: 165 SGIPLL----SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
A A F + + L + + +
Sbjct: 141 GTWQFAANQLWFLAASCCLAMHFNFNSRFSSQLPPMLLTTLQLFTAGCLGIALSWLTESW 200
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ + F + L S + + + G K A + ++ P+ +V SV I +
Sbjct: 201 PSTISPVTWKWFALSVLLATSLRYLMQTMGQKSANPTNAALLMLLEPVWTLVLSVVIYDE 260
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + ++ ++++Y + +
Sbjct: 261 TMPFNKMLGCAFLLASLLLYRVSQLRLR 288
>gi|262277450|ref|ZP_06055243.1| integral membrane protein [alpha proteobacterium HIMB114]
gi|262224553|gb|EEY75012.1| integral membrane protein [alpha proteobacterium HIMB114]
Length = 282
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 89/277 (32%), Gaps = 5/277 (1%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L V + + E V + R + P V + + S
Sbjct: 9 GFLLVSLGGLFLSSGGALFKLFENQDVWTIYFWRSFFFAPAVLIYLFFSSKN----NVIN 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K + +F A + A G +++A+ F + G LKE++N
Sbjct: 65 KFKNVGIIGIFCAALYATGSGAYMFAMKHTTVANVLFIISTQTFMLAVAGYFILKEKINL 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
IA L+ + + IM L A + + + + +A+
Sbjct: 125 TTGIAILMASIGIFIMIGTKISNGTMLGNAFAFVTPICFTSIVMIIRKYQHTDMVPAVAL 184
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + + G + + + L + L + F + G + + + VGI ++
Sbjct: 185 SGV-FCMAVGAMMSNNLMMTSHDFFLAFLFGSLQYAPGFICLTLGSRTTESAKVGIFAFS 243
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + + + I I+ +A+++
Sbjct: 244 EAIAGPLWAWIFVNENPSIGVFIGGTIIFLALLLKSF 280
>gi|241204796|ref|YP_002975892.1| hypothetical protein Rleg_2075 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858686|gb|ACS56353.1| protein of unknown function DUF6 transmembrane [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 306
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/312 (12%), Positives = 97/312 (31%), Gaps = 19/312 (6%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL---EQVSVLEVISHRVLWSLPGVFFAIV 72
+ G + A ++ I +++ E +S +V +R + + +
Sbjct: 1 MSEPHQNPLQGMAIMSGAMLILPIMDAIAKYMATFEAMSPGQVTFYRFFFQIACTLPILF 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
G +L + + M + + F A+ YFV P +
Sbjct: 61 ALFGLKAL------SAQRPWMNLLRGALHGGASLLFFVAVKYMPLADVFAIYFVEPFMLT 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L ++FL E++ + A ++ +I+ S A+ A+ F+ +
Sbjct: 115 ALSALFLGEKVGWRRWTAIVVGFGGAMIVIQPSYEIFGLKALLPVACAFLFSLYLFLNRA 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFS----------GGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + + + V+ + + + L+ G ++ +
Sbjct: 175 IGEADSPLTMQTMAGIGGTVFMAAALFLGNSSGNADFAVSLPSSGLGLVLLLALGSISGY 234
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + A LS + +Y + V + + I I+V + + +
Sbjct: 235 AHMLIVRAFRLAPLSLLAPFQYFEIISATVLGYALFNDFPSFSKWIGIFIIVASGLFIIW 294
Query: 303 PTVINSGKNKTK 314
+ + K+
Sbjct: 295 RERLQAQSLKSS 306
>gi|227822673|ref|YP_002826645.1| putative transmembrane component of ABC transporter [Sinorhizobium
fredii NGR234]
gi|227341674|gb|ACP25892.1| putative transmembrane component of ABC transporter [Sinorhizobium
fredii NGR234]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/284 (9%), Positives = 76/284 (26%), Gaps = 11/284 (3%)
Query: 36 LWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGML 94
+WG + + + + V ++ R+ + + + G L + +G++
Sbjct: 26 IWGGSFFFARVAVAHVPPFTLVLLRLGLAAIALHLYLRGNHGLYPALAARWREFLVMGLI 85
Query: 95 VFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV-----FLGSVFLKERLNHLQII 149
+ + G + + + +V L + L L L
Sbjct: 86 NNAIPHAFIFLGQTHIGAGLAAILNATTPVWTVLIANVATEDERLTAAKLSGCLLGLAGT 145
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
AL+ +L + +G L + +A + G +
Sbjct: 146 VALIGPSALAGIFGAAGDVPLWALVLPVLAAVSYGLSATYGKRFRGLAPPVTAAGQLTAS 205
Query: 210 YVVWNGF-----SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+V L + ++ + +F + A + ++
Sbjct: 206 TIVMLPVAAFVDMPWTLPMPPLSAMLAILGLALVSTAYAYILFFRIMAEAGATNTSLVTL 265
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
P I+ L + + ++ + V + +
Sbjct: 266 LVPPSAILLGYLFLGETLQAADIAGMALIAAGLAVLDGRILRSR 309
>gi|254386026|ref|ZP_05001342.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194344887|gb|EDX25853.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 327
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/282 (12%), Positives = 81/282 (28%), Gaps = 7/282 (2%)
Query: 29 FVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
F + I+WG + L + E + +V RV + + ++ GL + T +
Sbjct: 40 FALLS-IIWGFSFLLIKVGTEAYAPFQVALGRVFFGALALLTVLLVRREGLPRGRRTWAH 98
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
+L+ +A + + + + V L R
Sbjct: 99 LTVAALLLNTAPFSLFAYAELSIPSSLAGICNATSPLWGMALSLVALSEDRPTRRRFAGL 158
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-----FIEMCV 202
+ L ++ L SG+ A+A+ S + +
Sbjct: 159 GLGFLGVLTVLGAWQGFSGVDAKGTALALLASLCYPIGWIYVRRTLASTPGSPVALTGAQ 218
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + L ++ + P + L + + +T ++
Sbjct: 219 LLVSTLQLLLVSSLFTSAPTSFPLWPTLSVIALGALGTGMALQMQYGLVTEVGPTTAQMV 278
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
Y P++ + V +L + + + IV+ +
Sbjct: 279 TYFIPVIATTAGVALLGEQLHWNTPVGAAIVLTGAALTQARR 320
>gi|12652723|gb|AAH00111.1| TMEM22 protein [Homo sapiens]
Length = 390
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/304 (9%), Positives = 89/304 (29%), Gaps = 14/304 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
+ + +F + + G L T+ + V LE+I R ++ + V Y
Sbjct: 78 QSRKMWIVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYY--QEA 135
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ + +I + F I + + + +++ L
Sbjct: 136 PFGPSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEK 195
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPL---------LSLAIAVTWSAYCFARKTIP 189
+ + + L + L ++ + L ++ + +
Sbjct: 196 MAYVDMATVVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRS 255
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ + + + + F E + +LI + ++ F Y
Sbjct: 256 IKEKISMWTALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYY 315
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ + + V +++ ++ +V + +L I++I++ V +
Sbjct: 316 ALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRN 375
Query: 310 KNKT 313
+
Sbjct: 376 LRRQ 379
>gi|28379400|ref|NP_786292.1| transport protein [Lactobacillus plantarum WCFS1]
gi|28272239|emb|CAD65147.1| transport protein [Lactobacillus plantarum WCFS1]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 92/289 (31%), Gaps = 12/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L LWG + Q L +S L +++ R+L S + FS
Sbjct: 2 QKKTVGLLLASAGPFLWGSSGTVAQHLFDTTTISPLWLVAVRMLVSGG--LLILYGFSRR 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++ V ++VFS +A + A+ T + + F++PV+ + +
Sbjct: 60 LPVMVVFHDWRATVRLIVFSLFGMAGVQLTYFMAISTGNAAMAAILQFLSPVMIIIFITA 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPV 190
+ + +I+ + I +++ + + A + +
Sbjct: 120 TTWQLPGKVDVISVVSAIAGTVLIVTEGHTDSLALPVIAIIWGLLAAVGATIYTLMPTKL 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + + V+ + L + + F
Sbjct: 180 LKVYGATPIVGWSMLIGGGLVLVGTGAWHHSPQLTWVAWGQVGFVVIFGTMLAYLFFLQS 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ +T ++ PL + SV L + V I ++V ++
Sbjct: 240 LEYILPTTASVLGAIEPLAATILSVLFLHVHFNWVGLIGAIMIVGVTIL 288
>gi|253988928|ref|YP_003040284.1| hypothetical protein PAU_01447 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780378|emb|CAQ83539.1| putative membrane protein [Photorhabdus asymbiotica]
Length = 304
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 94/282 (33%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F F A ++W I + ++ + + +R L + + ++ + + +
Sbjct: 3 MFFPFLAVLIWSINAVVSKAATTAIDPAAISFYRWLLAFLTLTPFVLL----PVIRQWKI 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+LV A + ++ YA + + P++++ + L+
Sbjct: 59 ICQHWWKLLVLGALGMVLYQSLAYYAAHSISAMFMGIFNSMLPLLTIIISIFVLRVIPTI 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ +L + L+ + G+ L + + +Y S
Sbjct: 119 GIALGTVLSLFGLVWLISAGNPMSLLQHGLGHGELMMLIASISYALYGVLTKRWSIPLPN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F + L L L + ++ G+ + +
Sbjct: 179 WQSLYVQIAFGVLLLLPNFLLTKDVQLNANNIPLVLFAGIPASILAPYLWIQGVIKLGAN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T I AP+ + ++ +L + + + I GI ++ +++
Sbjct: 239 TTSIFMNLAPVFTAIIAILVLHEKMHSYHLIGGGITLLGVML 280
>gi|300768654|ref|ZP_07078551.1| DMT family permease [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308181616|ref|YP_003925744.1| DMT family permease [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|300493746|gb|EFK28917.1| DMT family permease [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308047107|gb|ADN99650.1| DMT family permease [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 92/289 (31%), Gaps = 12/289 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+G L LWG + Q L +S L +++ R+L S + FS
Sbjct: 2 QKKTVGLLLASAGPFLWGSSGTVAQHLFDTTTISPLWLVAVRMLVSGG--LLILYGFSRR 59
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L ++ V ++VFS +A + A+ T + + F++PV+ + +
Sbjct: 60 LPVMAVFHDWRATVRLIVFSLFGMAGVQLTYFMAISTGNAAMAAILQFLSPVMIIIFITA 119
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPV 190
+ + +I+ + I +++ + + A + +
Sbjct: 120 TTWQLPGKVDVISVVSAIAGTVLIVTEGHTDSLALPVIAIIWGLLAAVGATIYTLMPTKL 179
Query: 191 GSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
G + + V+ + L + + F
Sbjct: 180 LKVYGATPIVGWSMLIGGGLVLVGTGAWHHSPQLTWVAWGQVGFVVIFGTMLAYLFFLQS 239
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ +T ++ PL + SV L + V I ++V ++
Sbjct: 240 LEYILPTTASVLGAIEPLAATILSVLFLHVHFNWVGLIGAIMIVGVTIL 288
>gi|254443092|ref|ZP_05056568.1| Integral membrane protein DUF6 [Verrucomicrobiae bacterium DG1235]
gi|198257400|gb|EDY81708.1| Integral membrane protein DUF6 [Verrucomicrobiae bacterium DG1235]
Length = 305
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 92/295 (31%), Gaps = 14/295 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKD 83
+G L + + + LE L R + +G + +
Sbjct: 17 RIGLLLYIVLTASFCYVFIL-RGLEYAPPLAFAGFRTFIGGVTLLGISALRTGRILPERR 75
Query: 84 TLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERL 143
K + + T ++ +G + + S P+ +G FL+ERL
Sbjct: 76 LWK-----WVPCVALTATSLTFGTMFLSPGFAGAGIASILGNAQPLFIAAIGFFFLQERL 130
Query: 144 NHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARK--------TIPVGSSEG 195
+ L+ +A L ++ ++++ S + + + A +
Sbjct: 131 SPLRALALLFGLIGVIVIVSPSFGAKENALLIGSLIALMTSLSAAIGTVLGRYIKLGDSI 190
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
LA + + + + + L L +FV + Y ++R +
Sbjct: 191 VAFVGTQLATGGIILLFASLIFENDSIEWTPAFLGILLFLAILNTAFVAWAWFYLLQREQ 250
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
S +G+ + P+L + + + + + IV++A+ +
Sbjct: 251 ASGLGMYLFLVPVLGVAWAYVFAGERPEPTSFLGGAIVLLAVFTQEFEGFRRRVR 305
>gi|163745272|ref|ZP_02152632.1| hypothetical protein OIHEL45_06775 [Oceanibulbus indolifex HEL-45]
gi|161382090|gb|EDQ06499.1| hypothetical protein OIHEL45_06775 [Oceanibulbus indolifex HEL-45]
Length = 289
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 80/292 (27%), Gaps = 12/292 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ L ++W + + S L +S R L S + L
Sbjct: 3 IRAILMGLAFAVMWSSAFTSARIIVMDASPLLALSLRYLISGLIGVGIALALGQSWRLTP 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ ++F AV+ G A+ T + L + P++ F FL E+
Sbjct: 63 AQWR-----ATIIFGVLQNAVYLGLNFIAMQTIEASLAAIIASTMPLLVGFAAWAFLGEK 117
Query: 143 LNHLQIIAALLIILSLLIMTLH------SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L L + L ++ + I+ L+ AI V
Sbjct: 118 LRPLGVAGLLAGVVGVAIIMGARLGGEVDLFGLILCAIGVVALTAATLLVRGATSGGNFL 177
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I + + + + F + ++ + + R
Sbjct: 178 MIVGLQMLVGCVALTIATLLFETPRIDPSLRLTLAFAYTCLVPGLAATVVWFWLVNRIGA 237
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + P + + +L + + + I+ ++ + +
Sbjct: 238 TRAATFHFLNPFFGVAIAALLLGETLGPRDILGVAIIAGGILAVQVSRQRKT 289
>gi|90409706|ref|ZP_01217723.1| hypothetical protein P3TCK_03046 [Photobacterium profundum 3TCK]
gi|90329059|gb|EAS45316.1| hypothetical protein P3TCK_03046 [Photobacterium profundum 3TCK]
Length = 323
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 111/303 (36%), Gaps = 20/303 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G + I+WG+T + ++ L V + ++ R + ++ G+ + S
Sbjct: 4 TKKDALCGWIAAIAVAIIWGVTGVVSKPLSMAVDPMTLVFFRYVTAVIGLTIIYSFTSRS 63
Query: 78 LSLLKDTLK-----NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
SL KD K + + + V F +L + P +V
Sbjct: 64 ESLSKDLGKSLKIEKKDYLRIALCGIVGQGVFSLFNFLSLSHIGATENGVIQGMQPFATV 123
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLH------------SGIPLLSLAIAVTWSA 180
F G +F+ R+N +Q A + + + M++ + + +A+ W+A
Sbjct: 124 FFGMMFMNFRMNKVQWGAFIASAVCIYAMSVGPTNSIEGGTPLLGYVYVTCSMLALAWTA 183
Query: 181 YCFARKTIPVGSSEGFFIEMCVLA--IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL 238
+ A GS + +A + +V+ S + L +
Sbjct: 184 HLRASLADKYGSVVSMLYQYISVAALGIVMVFVLDLDLSQINIILSSPLLIGLLIFLGTG 243
Query: 239 LNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ + + Y KR + + PL+ + +V L + + +TIV ++V+A+
Sbjct: 244 ISGGSYLVQLYSFKRIGVEKATMALNLMPLVGYLVAVMTLGEEMVLGKTIVVSLIVVALY 303
Query: 299 VYL 301
V+
Sbjct: 304 VFT 306
>gi|306845745|ref|ZP_07478314.1| transporter, DME family [Brucella sp. BO1]
gi|306274066|gb|EFM55893.1| transporter, DME family [Brucella sp. BO1]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 89/287 (31%), Gaps = 10/287 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S + + I G +P++ + L +V L R+ ++ +
Sbjct: 12 SSQQRWAMIALITGGIAIGSSPIFVR-LSEVGPLATGFWRLALAVLPLLLMDGRERHERK 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +A G + +L + + + P+ +
Sbjct: 71 DAAPLTLADCLRLALP--GFFIAADLGAWHLSLHSTSVANATLLANMAPIFVTIGAWLLF 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ R++ I+ ++ + ++++ G L +A + A
Sbjct: 129 RSRVSSSFIVGLVVAVAGVIVLKGGPGELLHSRSSGDAMALLAAVFYAGYILSVGRLRSR 188
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + AI A+F + F G + L ++ + +Y +
Sbjct: 189 FSTMRIMLWSSAIAAIFSLPVAYFMEGHILPATLYGWLILAGLAWLTHAAGQSMIAYALA 248
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + P++ + IL +PI ++ I IV+ +++
Sbjct: 249 FLPASFSSLTLLLQPVVAAFLAWTILSEPIGLMQAIGGVIVISGILI 295
>gi|269119346|ref|YP_003307523.1| hypothetical protein Sterm_0720 [Sebaldella termitidis ATCC 33386]
gi|268613224|gb|ACZ07592.1| protein of unknown function DUF6 transmembrane [Sebaldella
termitidis ATCC 33386]
Length = 289
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 82/281 (29%), Gaps = 18/281 (6%)
Query: 29 FVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ ++WG ++ V +++ R + + F I+Y +
Sbjct: 1 MLLLVAVIWGTGFTASKIAVESGVLPFWMMTLRFGIAGIALLFLIIYHKSKI-------- 52
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
K + + + L + + +F + +L + +++ +
Sbjct: 53 TKKEIKAGIITGIFLYAAFATQTIGIQYTTSAKNAFLTGTNVIFVPYLCWIIFRKKPDKF 112
Query: 147 QIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ + LL + +++ L + + A + +
Sbjct: 113 ALFSTLLAFFGICLLSVDTNELGSLSMNKGDIYTLFCALFFALHIIALDYFTKIYDTLIL 172
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ LF V +G F + + L F I + K +
Sbjct: 173 AFLQIIFAFLFSAVSALITGQVSFGISSQGLLATLYLGIFSTFLAFTIQTAAQKYTSSAK 232
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ T + V S+ IL + T I + A+++
Sbjct: 233 TVVILSTETVFGAVFSILILNEQFTTKLLIGCLFIFAAIII 273
>gi|226229112|ref|YP_002763218.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226092303|dbj|BAH40748.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 312
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 97/293 (33%), Gaps = 22/293 (7%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
I +G + + T+++ Q + + + R + + +F + +
Sbjct: 26 CICFGASVVATRYVVPQTTPVVLAFLRYVIASACMFALL------RGRALVAMPGRDRAQ 79
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
+ + A + F +L + P++++ L + ERL+ +I L
Sbjct: 80 IALLGALFFGLFPWSFSASLTHLPAATVALIVATNPLVTLALSVLRGTERLSARMVIGQL 139
Query: 153 LIILSLLIMTLHS---------------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
L + +++ + G L + ++R + SS
Sbjct: 140 LALAGIVLAIDPARATAAQSTSGTNYWIGYVLAFTTVICGSIYNVWSRPLLLRYSSALVT 199
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
V + L + G + L L + F ++SY ++R+ S
Sbjct: 200 TWAMVAGVLLLAPLALLQGLGTHTRTISLNGWLAVLFLGTLGGAVGFGLWSYALRRSTPS 259
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
V + P+ I VF+L +PI + V+ + + V ++ +
Sbjct: 260 RVAVFLALNPISAIALGVFLLGEPITMRLILALVAVLAGINLATRMPVTSTER 312
>gi|152982204|ref|YP_001353605.1| transporter of the DMT superfamily [Janthinobacterium sp.
Marseille]
gi|151282281|gb|ABR90691.1| transporter of the DMT superfamily [Janthinobacterium sp.
Marseille]
Length = 309
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/312 (10%), Positives = 88/312 (28%), Gaps = 15/312 (4%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYF 74
+ L+ F A +LW + ++ +S + +R++ L + ++
Sbjct: 2 SAKPRARILYPYLYPFLAIVLWAGNVIVSKLAASAISPTAITFYRLVLVLLLMSPVML-- 59
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G + + + +A+ A + + + P+++ L
Sbjct: 60 --GPLWRNRAMIRRHFWKLALSGLLAMALFQSLSYRAAESTTATNMAIVTALIPLLTAIL 117
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLS----------LAIAVTWSAYCFA 184
+ L E + + +L +L + + + +A A
Sbjct: 118 SVMVLGEAITLGMLAGGILSFGGILYLLGQGDMAAALANGVHIGDLLMLLAAASYALYGV 177
Query: 185 RKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVF 244
+ +F + L L + +
Sbjct: 178 LLKYWKMPVPAWQAIYIQAFAALIFMLPMFVMLPPGAASLDARTLPLIAYAGIGSSIILS 237
Query: 245 CIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ G+K+ + I P+L + +V L + I G+ ++ +++
Sbjct: 238 FLWIEGVKQLGPNRCSIFINLLPVLTALFAVIWLHDAMHAYHVIGGGVTLLGVLLTQTVQ 297
Query: 305 VINSGKNKTKKS 316
K ++
Sbjct: 298 KPLLRKKMQAEA 309
>gi|126732796|ref|ZP_01748590.1| hypothetical protein SSE37_09433 [Sagittula stellata E-37]
gi|126706695|gb|EBA05767.1| hypothetical protein SSE37_09433 [Sagittula stellata E-37]
Length = 302
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 73/289 (25%), Gaps = 10/289 (3%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVY 73
+ T G L + A + + L + L+V+ R
Sbjct: 4 AKPREDRTRTGVLLMVLAVAFFTCIDSSAKLLIIAGLPTLQVVFARYTGHFLVAVLL--- 60
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
L + A + + L AL +T+ F P+
Sbjct: 61 ----FGLRDPSAFRSHAPVKQMLRSLFLLGSTVLNFSALQFLPITVTTTIMFAGPIAITL 116
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
L L E++ +I+A +L++ G + C + I
Sbjct: 117 LAIPLLGEKVGLRRIVAVCCGFAGVLVVMQPWGAEFHPAMFLSLGALVCASFYFILTRML 176
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L + G + + +
Sbjct: 177 SDVEANATQQLWSSGIAALCLLPFVLQDWTWPTGWSWLPFVLIGCFGASGHIAATVAHRL 236
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
A S + + Y + + + +++IA +Y+
Sbjct: 237 ADASILAPVVYVQIFMAAFAGWSLFDTLPTVWTLGGG-LIIIASGLYIW 284
>gi|312132063|ref|YP_003999403.1| hypothetical protein Lbys_3399 [Leadbetterella byssophila DSM
17132]
gi|311908609|gb|ADQ19050.1| protein of unknown function DUF6 transmembrane [Leadbetterella
byssophila DSM 17132]
Length = 304
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 94/297 (31%), Gaps = 12/297 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLE--QVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ G F + I +G+ PL+ L + + + R L++ + +
Sbjct: 13 MKNNILKGYFFAAASAISFGLIPLFIIPLNEKGIHLDTTLFFRFLFAALMIGVYCTFKKQ 72
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
L + N + + +L + A+ F ++ + S +V P++ L
Sbjct: 73 SLRV------NQRDLFLLFVLGILYALSAEFLLWGYSAMSPGIASTVLYVYPLMVAILLY 126
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA----IAVTWSAYCFARKTIPVGS 192
E++++ + L +L +LI+ + + + Y + G
Sbjct: 127 WKYSEKISNPTRWSMFLALLGVLIIGWEGENMRFNFWGTIIVLTSAMTYALYMVIVNKGK 186
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I + ++ + S G + + I+
Sbjct: 187 LQAQGIVVTFYSVLFSSFYYLIKMSMGSFILPSLDTLGFISLFSLVTVVISVLFIILAIQ 246
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ I+ P++ + SV I + +V+ A++V +L +
Sbjct: 247 WIGSTPTAILGALEPVVAVGVSVAIFGEKATWNLFAGLILVLSALMVKVLGDTQSLR 303
>gi|261491849|ref|ZP_05988428.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261494680|ref|ZP_05991160.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261309645|gb|EEY10868.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261312504|gb|EEY13628.1| DMT superfamily drug/metabolite transporter [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 289
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/287 (9%), Positives = 82/287 (28%), Gaps = 2/287 (0%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L++ A ++W + + + + ++++ R+ + + + +
Sbjct: 1 MLYLLIATLIWASSFIVGKVAISAFDPVQIMQIRLTLAAFIALPFFIPAYKKIQKNQHIK 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A L + + L L+
Sbjct: 61 VWLISFLTFPLCVILQFSGLKLTSAASAVALLGLNPLLTVLVSYFCFKKQATRLDFILSL 120
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ L++ + + LL + + + S + + L
Sbjct: 121 FACLGILIMASGSDDSGSINVLGLLLVTLGSLSFIVGMYLSKEILQSVKVIDLTKITLVQ 180
Query: 206 PALFYVVWNGFSGGEHFFLGN-IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
A+ + + + S +++ GI ++ GI+
Sbjct: 181 GAITALPITLLFAENWQLPTSLSAWASVAYLGIICTSLAILLWNKGISQSSPILAGILLA 240
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
P+ ++ ++ L + + V + IV+ ++ +L ++ K
Sbjct: 241 LEPVFGLLMALVFLSEQLSLVTWVGIIIVICTALLSVLLPMMKRYKR 287
>gi|251778774|ref|ZP_04821694.1| UAA transporter family [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083089|gb|EES48979.1| UAA transporter family [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 302
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 89/285 (31%), Gaps = 20/285 (7%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
F ++WG T + T+ L + E++ R + +
Sbjct: 10 FLAFFTIVVWGTTFVSTKVLLSTFTPAEIMFLRFSIAYIMLLLI-------HPKFHKITS 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK-ERLNH 145
+ L+ T ++++ AL+ + P+++ F+ F K E LN
Sbjct: 63 LKEEALFLLAGITGGSLYFLTENSALIYSLTSNVALILATAPILTAFMAHFFSKGETLNK 122
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
I ++ IL + ++ + L + + I + + + +
Sbjct: 123 NLFIGFIIAILGVFLVIFNGNFILKLNPLGDILALSAALCWAIYSVTLKKISGTYNYIYV 182
Query: 206 PALFYVVWNGFSGGEHFFLGNIPD-----------TLFLIGYGLLNSFVFCIFSYGIKRA 254
+ F N L + + + +++Y +
Sbjct: 183 TRKMFFYALLTILPFILFSSNNNITLLSLSQPKVIFNLLFLGVIASGVCYVVWNYTVDNL 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P + +++S FIL + I T +V++ + V
Sbjct: 243 GIIKTNNYIYLIPAVTMIASFFILNESITLYSTFGAILVLLGVYV 287
Score = 36.8 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 1/134 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTL 231
+A F + ++ Y++ H + L
Sbjct: 9 NFLAFFTIVVWGTTFVSTKVLLSTFTPAEIMFLRFSIAYIMLLLIHPKFHKITSLKEEAL 68
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL-KQPIDTVRTIVF 290
FL+ S F + + + S V ++ TAP+L + F + ++ I F
Sbjct: 69 FLLAGITGGSLYFLTENSALIYSLTSNVALILATAPILTAFMAHFFSKGETLNKNLFIGF 128
Query: 291 GIVVIAMVVYLLPT 304
I ++ + + +
Sbjct: 129 IIAILGVFLVIFNG 142
>gi|254465913|ref|ZP_05079324.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206686821|gb|EDZ47303.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 301
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/284 (10%), Positives = 88/284 (30%), Gaps = 6/284 (2%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T L + L+ ++ + + R+ ++ + + L + +
Sbjct: 10 LMIATLGFVWGGTFLLIKLALDGITPFWLAASRIGFAALLLCAVWGWRGFKLFKSETSWP 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTP--VISVFLGSVFLKERLN 144
+ +G+L + + + WG + + + V P V + L+ +
Sbjct: 70 SLVIIGILSTALPFMLISWGQQHVSSGFTGVSMAAIPLMVLPLAHFFVPGEQMTLRRLVG 129
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF---IEMC 201
A + +++ A +A C++ +I +
Sbjct: 130 FAIGFAGVALLIGGKAFETSGAELEAYGRAACLSAAACYSVSSILTRRLPPVDPVGLAAI 189
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+L I + G + I + + + ++ A + + +
Sbjct: 190 LLVIGCFVIFPAAWAAEGAPVMPDTKTLVIAAILGLIPTAAANLLRVIVVREAGPTFMTL 249
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
Y P+ +V L + + + +++ + + +
Sbjct: 250 TNYQVPVWAVVLGAIFLGEELPPSMLLAMVMILGGLGLSQFGRL 293
>gi|149914628|ref|ZP_01903158.1| integral membrane protein, putative [Roseobacter sp. AzwK-3b]
gi|149811421|gb|EDM71256.1| integral membrane protein, putative [Roseobacter sp. AzwK-3b]
Length = 299
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 91/297 (30%), Gaps = 9/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G+ + A + + ++ + + + V +++ A + L
Sbjct: 1 MENLRGSALMVLAMAGFALEDMFIKRLADDLPVGQILMLLGAGGAVIFGLAALSRGHALL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ TI V + S TP+ ++FL
Sbjct: 61 SRDLLTWPVMLRNLGELIGTIGFVTA------IALTPLSSASAILQATPLAVTLGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
+E++ + A L+ +L++ ++ + + A + + +
Sbjct: 115 REQVGWRRWSAILVGFAGVLMVIRPGLSGFEPASLFAVQAVFGLAMRDLATRAVPHTVTS 174
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFL--GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
M + + V + + + +L + ++ ++S
Sbjct: 175 MQLSSYGFATIVPAGALLLWLSGGAVSPSAANWRDIALALVLGVAAYYAIVAAMRVGEVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
V YT + +V +V I + D + + I++ + + LL K + +
Sbjct: 235 FVTPFRYTRLIFALVIAVLIFDEQPDALTLMGAAIIIASGLYTLLRERRLRRKAQRQ 291
>gi|71020069|ref|XP_760265.1| hypothetical protein UM04118.1 [Ustilago maydis 521]
gi|46099948|gb|EAK85181.1| hypothetical protein UM04118.1 [Ustilago maydis 521]
Length = 554
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/330 (11%), Positives = 88/330 (26%), Gaps = 47/330 (14%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ----------VSVLEVISHRVLWSLPG 66
+ + T +G + + + + + L+ + L+ + LE++ L G
Sbjct: 220 PSTTPGTNLGLMLIAVSQVAYSTMNLFVKLLDDRQGHQPNSDPIGALEIVGVECLIIWIG 279
Query: 67 VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
A+ LL + +L + F+
Sbjct: 280 CMLAMCLAKTEHILLGPPGARLMLLA----RGMFGFASTLALYISLHALSLSDATVITFL 335
Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------------- 173
P+ + FL V L E + + +A +L ++ + ++ S +
Sbjct: 336 APLATGFLAHVVLHEPFSVRERMAGVLSLVGVTLIARPSFLFGNDAGQGVPEDGDIQLPS 395
Query: 174 --------------------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVW 213
V A + + + + V
Sbjct: 396 PSDPSSTTEAARIVGILVALAGVVLMAAAWVCLRRIGKRASTYHSIAYFSLCSWVSSFVA 455
Query: 214 NGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVS 273
+ L L+G GL + + G++R M Y + +
Sbjct: 456 MWLLDQRFVLPSSTVSLLLLLGVGLFSLLAQVFQTLGLQRESAGRAATMSYLQIIFALTW 515
Query: 274 SVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
+ + Q D + I I++ + L
Sbjct: 516 QLLLFGQLPDFISVIGSLIILASGAWVALS 545
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 43/149 (28%)
Query: 158 LLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFS 217
L +M + S I I + ++ +
Sbjct: 228 LGLMLIAVSQVAYSTMNLFVKLLDDRQGHQPNSDPIGALEIVGVECLIIWIGCMLAMCLA 287
Query: 218 GGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFI 277
EH LG L L+ G+ + LS ++ + APL + +
Sbjct: 288 KTEHILLGPPGARLMLLARGMFGFASTLALYISLHALSLSDATVITFLAPLATGFLAHVV 347
Query: 278 LKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
L +P + + ++ + + P+ +
Sbjct: 348 LHEPFSVRERMAGVLSLVGVTLIARPSFL 376
>gi|306840705|ref|ZP_07473454.1| transporter, DME family [Brucella sp. BO2]
gi|306289278|gb|EFM60522.1| transporter, DME family [Brucella sp. BO2]
Length = 299
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 88/287 (30%), Gaps = 10/287 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S + + I G +P++ + L +V L R+ + +
Sbjct: 12 SSQQRWAMIALITGGIAIGSSPIFVR-LSEVGPLATGFWRLALAALPLLLMDGRERHERK 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +A G + +L + + + P+ +
Sbjct: 71 DAAPLTLADCLRLALP--GFFIAADLGAWHLSLHSTSVANATLLANMAPIFVTIGAWLLF 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ R++ I+ ++ + ++++ G L +A + A
Sbjct: 129 RSRVSSSFIVGLVVAVAGVIVLKGGPGELLHSRSSGDAMALLAAVFYAGYILSVGRLRSR 188
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + AI A+F + F G + L ++ + +Y +
Sbjct: 189 FSTMRIMLWSSAIAAIFSLPVAYFMEGHILPATLYGWLILAGLAWLTHAAGQSMIAYALA 248
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + P++ + IL +PI ++ I IV+ +++
Sbjct: 249 FLPASFSSLTLLLQPVVAAFLAWTILSEPIGLMQAIGGVIVISGILI 295
>gi|316931940|ref|YP_004106922.1| hypothetical protein Rpdx1_0549 [Rhodopseudomonas palustris DX-1]
gi|315599654|gb|ADU42189.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris DX-1]
Length = 307
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 70/289 (24%), Gaps = 17/289 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG + + L + + R +L + S
Sbjct: 10 IALMLLCCLSWGFNQIAVKLVLPDIPPFLQAAIRSAGALIVILIIA------RSRRVKLF 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + + + + + + L + P L ERL
Sbjct: 64 QRDGTLWAGLSAGVLFGLEFVLIYRGLTLTTASRAVVFLYTAPFFVALGSYRLLGERLRR 123
Query: 146 LQIIAALLIILSLLIMTLHS----------GIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
LQ L + + G +L A+ + + T +
Sbjct: 124 LQWAGLGLSFAGVALAIGVPQADVDTSVLVGDLMLVGGGALWAATTLIVKSTRLQRAPAE 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V + + L + F ++ +K
Sbjct: 184 KGLAYQVAVSVPILAAAAALSGETITKMPSPLSLGLMAYQTIWVVGLTFLLWFGLVKTYS 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S + + PL + + I+ P+ +V+ + + P
Sbjct: 244 ASKLSAFTFITPLFGVAAGYLIMHDPLTPAFGAAAVLVIAGLYLVNRPA 292
>gi|254720291|ref|ZP_05182102.1| hypothetical protein Bru83_12335 [Brucella sp. 83/13]
gi|265985309|ref|ZP_06098044.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839826|ref|ZP_07472625.1| transporter, DME family [Brucella sp. NF 2653]
gi|264663901|gb|EEZ34162.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405102|gb|EFM61382.1| transporter, DME family [Brucella sp. NF 2653]
Length = 299
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 89/287 (31%), Gaps = 10/287 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S + + I G +P++ + L +V L R+ ++ +
Sbjct: 12 SSQQRWAMIALITGGIAIGSSPIFVR-LSEVGPLATGFWRLALAVLPLLLMDGRERHERK 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +A G + +L + + + P+ +
Sbjct: 71 DAAPLTLADCLRLALP--GFFIAADLGAWHLSLHSTSVANATLLANMAPIFVTIGAWLLF 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ R++ I+ ++ + ++++ G L +A + A
Sbjct: 129 RSRVSSSFIVGLVVAVAGVIVLKGGPGELLHSRSSGDAMALLAAVFYAGYILSVGRLRSR 188
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + AI A+F + F G + L ++ + +Y +
Sbjct: 189 FSTMRIMLWSSAIAAIFSLPVAYFMEGHILPATLYGWLILAGLAWLTHAAGQSMIAYALA 248
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + P++ + IL +PI ++ I IV+ +++
Sbjct: 249 FLPASFSSLTLLLQPVVAAFLAWTILSEPIGLMQAIGGVIVISGILI 295
>gi|253700906|ref|YP_003022095.1| hypothetical protein GM21_2288 [Geobacter sp. M21]
gi|251775756|gb|ACT18337.1| protein of unknown function DUF6 transmembrane [Geobacter sp. M21]
Length = 302
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 83/287 (28%), Gaps = 15/287 (5%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
S+ + + + WG+T + + QV V +S R L + + V
Sbjct: 3 SMKKIQAGILLLITTFFWGVTFTIVKDAISQVDVFVFLSQRFLIASAVMLPLAVV----- 57
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ N + + +L + F AL T F + V+ G++
Sbjct: 58 ---RANRLNTRLITNGCMLGILLFASYAFQTMALQYTSASNTGFLTGLNVVLVPLFGALL 114
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-- 196
+ L L ++ + + I C A +
Sbjct: 115 FRLPAGPGIRWGVALATPGLFLLCGNGSLSFNYGDILAAICGACVALHLLYTSRFSRQAS 174
Query: 197 ----FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ L + L ++ G E F ++ + F F + + K
Sbjct: 175 SDVYLLTTLQLTVVGLLSLLTATARGKEVFVWHPELLWTLVVCVLIATVFAFLVQTTMQK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ ++ T P+ + + + + +++ M++
Sbjct: 235 FISPAHTALIFCTEPVFAAGYAYYAAGERLGFFGITGAALILAGMII 281
>gi|161522557|ref|YP_001585486.1| hypothetical protein Bmul_5524 [Burkholderia multivorans ATCC
17616]
gi|189348568|ref|YP_001941764.1| drug/metabolite transporter (DMT) superfamily permease
[Burkholderia multivorans ATCC 17616]
gi|160346110|gb|ABX19194.1| protein of unknown function DUF6 transmembrane [Burkholderia
multivorans ATCC 17616]
gi|189338706|dbj|BAG47774.1| drug/metabolite transporter (DMT) superfamily permease
[Burkholderia multivorans ATCC 17616]
Length = 298
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 84/285 (29%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F+ LWG + L+ + + + +++ R+L + + + G + +
Sbjct: 6 FAFLLTLAALWGASFLFIRVGAPEFGPVPLMAVRILIAAVFLAIVLGSKRGFHRMSGKIV 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ L + LT +TS TP+ + + V++ +RL+
Sbjct: 66 PLFAIGVLNQALPFCLFAYAE------LTLPAGVTSVINATTPLWAAIVAFVWIGDRLSR 119
Query: 146 LQIIAALLIILSLLIMTL---------HSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
++ + +LI+ + T A T +
Sbjct: 120 TRVAGLFIGFAGVLILVWKDLSGLRSFSESAIAPIAVLCATLLYGISANATKRFLAGVDS 179
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
I A + + + + I+ Y I A
Sbjct: 180 LAIATGSMIGAAIVLAPFAVVYWPSTPISTTAWVSVIALGVACTGIAYIIYFYLIATAGP 239
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + + P+ ++ L + I + G+V++ ++
Sbjct: 240 ARAVSVTFLVPIFGLLWGTLFLDESISPMMIAGCGVVILGTMLAS 284
>gi|126658921|ref|ZP_01730063.1| hypothetical protein CY0110_26502 [Cyanothece sp. CCY0110]
gi|126619719|gb|EAZ90446.1| hypothetical protein CY0110_26502 [Cyanothece sp. CCY0110]
Length = 309
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 94/298 (31%), Gaps = 11/298 (3%)
Query: 13 GLSKENASLPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAI 71
L+ ++ + ++ L + A I P++ + E ++S + +R+ A
Sbjct: 5 KLTSQDNTRVNVILFLTLVIALISISFAPIFIRISENELSANSTVFNRLFIFFIVFGLAQ 64
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFS---ATILAVHWGFFIYALLTRQGFLTSFSYFVTP 128
+K+P + + G + +L +TP
Sbjct: 65 TIRQRFYFSENIEIKSPLTPKHWLLLLLVGIMSITSLGLWAISLQYTSVANCMLLNNMTP 124
Query: 129 VISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT-------WSAY 181
+ + L + K++ + I+ +L + + + L S I +
Sbjct: 125 IFTSILAWLLFKKQFDSQFILGMILALSGAIFLGLQDLQGTNSHLIGDFYALLSAVFLGI 184
Query: 182 CFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNS 241
F I + I ++ V + F+ + F + +
Sbjct: 185 YFLIVEQLRNHFSATTILLWRCGIGSVLLVPFVLFTEEKLFPNTWETWLAVIGLGLISEG 244
Query: 242 FVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + + S + + P++ + + I + + ++ + F I++ + +
Sbjct: 245 LGQRLLADCLDKFSSSFIAMFLLLEPIVSAILAWVIFAEGLTSITGVGFMIILTGIYL 302
Score = 36.8 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 11/110 (10%), Positives = 37/110 (33%)
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
FI V + + E L L+ G+++ +++ ++
Sbjct: 53 LFIFFIVFGLAQTIRQRFYFSENIEIKSPLTPKHWLLLLLVGIMSITSLGLWAISLQYTS 112
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
++ ++ P+ + + + K+ D+ + + + + L +
Sbjct: 113 VANCMLLNNMTPIFTSILAWLLFKKQFDSQFILGMILALSGAIFLGLQDL 162
>gi|52424590|ref|YP_087727.1| RhaT protein [Mannheimia succiniciproducens MBEL55E]
gi|52306642|gb|AAU37142.1| RhaT protein [Mannheimia succiniciproducens MBEL55E]
Length = 295
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 81/295 (27%), Gaps = 3/295 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
G + +F ++ +++F + + L I R + F L
Sbjct: 3 QKYRGEIILFIVSLIAASGWFFSKFSMAEFPALGFIGLRFFLAAIFFFPLAYPQLKRLDK 62
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + V+ + + L+ + +
Sbjct: 63 PQLIKSALVGLCYAVYIMLWMLGLINSAHFGEGAFLVSLSMLIAPLLSWLIFGHLPYKSF 122
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L+ + G + I+ +A F
Sbjct: 123 WLALPAAFTGLYLLSSGKGGLHFSFGSLIFL--ISSLVAALYFVLNNQYARDIPVLSFTT 180
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L I + + FL + + + +YG K ++T
Sbjct: 181 IQLFIVGTCCGTLSILFEQWPTSISMTAWGWFLCSLVIATNLRMLLQTYGQKYCHVATAA 240
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKK 315
I+ P+ + S+ IL + + + ++ A+++Y LP ++ + + K+
Sbjct: 241 IIMILEPVWTLFFSILILGERLTLHKAFGCLSILAAIMIYRLPAILRNQASANKE 295
>gi|114046500|ref|YP_737050.1| hypothetical protein Shewmr7_0994 [Shewanella sp. MR-7]
gi|113887942|gb|ABI41993.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-7]
Length = 306
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++ A LW + L S L+++ VL S+ + + +
Sbjct: 2 KSSNLAYVYGMAAVFLWSTVATAFKIALGFYSPLQLVFVAVLTSIVALGAILAWQKKLPL 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L L+ P + +++ A + V+ L + L
Sbjct: 62 LKAQLLRRPAFYLVT--GLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
K+ L +IAAL+ + I+ + +A+T + +
Sbjct: 120 KQHLRKSDMIAALIAYSGVFIIATGGDVSGFRFDSPLGIGLALTSTLLWCLYWIVNTKDQ 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L ++ + F ++ +K
Sbjct: 180 GDPVVSLLLSFLIGLPFITVTLLLTDTLPSFSLSAVMAGMYVGLFEMGITFVLWLMALKT 239
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A + + + + + +P++ I +IL++ I I G ++ M++ L K K
Sbjct: 240 ATRTANISTLAFLSPVMSIGFIAWILQETIAAATYIGLGFILSGMMLQQLFPRYLERKTK 299
Query: 313 TK 314
Sbjct: 300 LN 301
>gi|319790929|ref|YP_004152569.1| hypothetical protein Varpa_0236 [Variovorax paradoxus EPS]
gi|315593392|gb|ADU34458.1| protein of unknown function DUF6 transmembrane [Variovorax
paradoxus EPS]
Length = 316
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 85/286 (29%), Gaps = 3/286 (1%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
+ + A + G + Q +Q+ V+E I+ R + + A+ +
Sbjct: 27 VMLLLVAAVWGGSYAVAKQATQQLPVMEFIALRFGLTFIVLLPALKPLFNAQWRQGLAVG 86
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+L + + FV + + +
Sbjct: 87 GLLGANLLAIFVCETFGVSLTTASNAAFLISLCVALTPFVEWWLLGQRPAQRIFWAAGLS 146
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+ AA+L S + + G L+ LA + C R+ + + +
Sbjct: 147 AVGAAMLSATSPANIAVGWGDALMVLAAFLRAVMVCMTRRLAGHHAMPALTLTAVQSGVM 206
Query: 207 ALFYVVWNGFSGGEHFFLGN---IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL + + + + + L F F ++ R+ S V ++
Sbjct: 207 ALGAMAISLLASNGAWHMPPATASFWWGMAYLVLLCTVFAFFAQNHAASRSSPSRVSLLM 266
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ P+ + +V+ + + ++V A +P + +
Sbjct: 267 GSEPVFGALIAVYGFGETVGVWGWAGGLLIVAAAWWVTMPQKLEAR 312
>gi|304391840|ref|ZP_07373782.1| RhaT family protein [Ahrensia sp. R2A130]
gi|303296069|gb|EFL90427.1| RhaT family protein [Ahrensia sp. R2A130]
Length = 310
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 92/294 (31%), Gaps = 4/294 (1%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G LF+ + + ++ + + + + I+ R L+++P + + G
Sbjct: 9 SERDNAQGALFMTLSMAGFAFNDALMKWVMADIGLFQSIALRGLFAVPLMLLWFLLRGGW 68
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + L FF+ AL + + P+ +
Sbjct: 69 QTRTTIPTQMKHGSVWLRVIGE--VGGTYFFLTALSQMLLANVTAVLQILPLTITLTAAF 126
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER+ + +A L+ + +L++ G S +I + +
Sbjct: 127 IFGERVGWRRYVAILVGFIGVLMIIQPGGEEFSSASIYALICTAFLTLRDMATRKLPSGV 186
Query: 198 IEMCVLAIPALFYVVWNGF-SGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKL 256
V + A+ + + + + + L+ +L + ++ +
Sbjct: 187 SSSLVSVMTAIAITIMGLIGASFDPWIAVETTVWIGLLIAAILVLMGYQFSVLAMRHGDV 246
Query: 257 STVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
V Y+ + ++ +T+ I IVV + + +++ K
Sbjct: 247 GFVAPFRYSILIWALILGYLAFGNVPNTLAIIGAVIVVGSGLFTFYRERLSARK 300
>gi|294101485|ref|YP_003553343.1| protein of unknown function DUF6 transmembrane [Aminobacterium
colombiense DSM 12261]
gi|293616465|gb|ADE56619.1| protein of unknown function DUF6 transmembrane [Aminobacterium
colombiense DSM 12261]
Length = 302
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 96/291 (32%), Gaps = 9/291 (3%)
Query: 15 SKENASLPTMMGTLFVFCAYILWGITPL--YTQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
++++ G + L+G P+ + + + ++V+ R + + +F +
Sbjct: 7 TQQSKLPDHYKGAAAALLSAFLFGFIPILAVSAYKKGITVMTFHFMRFIIASIALFCLLY 66
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
+ G + + + V + + + + + + ++ P +
Sbjct: 67 FQKGHQ---VVMVGKKNFLQLFVLGGILFTLTSFSYFSSFQYIPASMAALIFYSYPALVA 123
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTL----HSGIPLLSLAIAVTWSAYCFARKTI 188
KE L I++ L + L+ ++ + + LA S +
Sbjct: 124 IGSLYVNKEPLTTKIILSITLSTVGLIFLSGKIDASVSMKGVLLAGFAALSYTSYILYGN 183
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + + + + G + L L++ F F
Sbjct: 184 SLMKKTPYQVVVAFVCFFSAVSFFIVGKATHNLILPHTTSTWLLFCIISLVSLSGFLAFF 243
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+K S I+ PL+ +V S+ I K+ + ++ + +V+ +
Sbjct: 244 LGVKLTTPSIAAILSMAEPLVTVVLSLLIFKEYLTILQYLGGILVLAGSFL 294
>gi|260431636|ref|ZP_05785607.1| possible transporter, RhaT family, DMT superfamily [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415464|gb|EEX08723.1| possible transporter, RhaT family, DMT superfamily [Silicibacter
lacuscaerulensis ITI-1157]
Length = 299
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 96/288 (33%), Gaps = 8/288 (2%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
++G+ ++ A + + + V + + VF G L
Sbjct: 12 NLIGSAWMIAAMAGFALEDALLKSAANVLPIWQVLVLFGLGGALVFAGAALIQGRRLLHP 71
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
D L P + +L L ++ A+ + TP++ V ++F E
Sbjct: 72 DVLSKPMKIRVLFEVFGRLF-----YVLAIALTPLSSATVILQATPLVVVAGAALFFGET 126
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ + A L+ ++ ++I+ +G +L+I FA + + ++ +
Sbjct: 127 VGWRRWSAILVGLIGVVIIIQPTGDSFSALSILAVLGMLGFAGRDLASRAAPATLGTTVL 186
Query: 203 LAIPALFYVV---WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
L VV G + L L G ++ + + ++ ++S V
Sbjct: 187 GFYGFLSIVVAGSLYRAFEGAAAVPVDAQTALHLTGAVVMGAVAYSSLMLAMRTGEVSAV 246
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
YT L I V I + +D + ++V + + L
Sbjct: 247 TPFRYTRLLFGIGLGVLIFDEHLDQTMWLGSALIVASGLYILWRGRQR 294
>gi|229592758|ref|YP_002874877.1| hypothetical protein PFLU5379 [Pseudomonas fluorescens SBW25]
gi|229364624|emb|CAY52532.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 298
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 82/284 (28%), Gaps = 2/284 (0%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
F Y++WG T L + +E L + R L + ++ + + G + +
Sbjct: 12 IAAFFALYVIWGSTYLVIRIGVEYWPPLMLGGIRFLVAGAAMYGFL-RWRGAPAPTWEQW 70
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K +G+L+ + AV + T + F G+ +
Sbjct: 71 KAAAKIGILLLTFGNGAVSVAEHTGVSSGVAALAVATVPLFTLLCGYFWGARNTRLEWAG 130
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+ + + +L++ S + L A A+ +L
Sbjct: 131 VILGMIGIAMLNMGSTLQSSPMGAALLLFAAASWAFGSVWSRRLPLPPGAMASAAEMLVA 190
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
+ + F + Y +K + + Y
Sbjct: 191 GVTLLIASALTGERLQAMPPLEGWLALAYLAVFGSIIAFNAYMYLLKHVRPAAATSYAYV 250
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
P + ++ + + + I + +++ A+++ LP
Sbjct: 251 NPAVAVLLGIVFIGETIGLEEALAMLVIISAVLLISLPQWRKPK 294
>gi|228906803|ref|ZP_04070672.1| Uncharacterized transporter [Bacillus thuringiensis IBL 200]
gi|228852807|gb|EEM97592.1| Uncharacterized transporter [Bacillus thuringiensis IBL 200]
Length = 313
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 93/292 (31%), Gaps = 11/292 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ +++ + L + + +++G ++ + E++ R +++ + +
Sbjct: 1 MLQKSFKQEKTVPALKMIASMVIFGSVGFFSVQ-TNLPSFELVFVRCIFATIFLSVCWLL 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ K V ++ L +W F A + Y + PVI +
Sbjct: 60 TGQYKQDKWE----RKEVIQVLICGFFLVFNWVFLFKAFENMSVTIAISVYHLAPVIVLL 115
Query: 134 LGSVFLKERLNHLQ------IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKT 187
+GS+ KE+L + A L+I + + + + +
Sbjct: 116 IGSIVFKEKLTLISIISIIVCFAGALLIAGIDGSFSFGSLMSSGMIWGFLAALFYAFTTL 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
G ++ M L +++ L T + + V+ +F
Sbjct: 176 FGKGINKMSAYAMTFLQTFLGIFLLIPFIDLDAFSGLTQSNWTYIIATGFIHTGIVYYLF 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ T+ I+ + P + I+ + ++ + I M +
Sbjct: 236 FDSLRHLSTKTISILVFLDPAVAILLDTVLTGFRPTLMQITGILFIFIGMTL 287
>gi|49477862|ref|YP_037144.1| drug/metabolite exporter family protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|196032663|ref|ZP_03100077.1| transporter, EamA family [Bacillus cereus W]
gi|49329418|gb|AAT60064.1| transporter, Drug/Metabolite Exporter family [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|195995414|gb|EDX59368.1| transporter, EamA family [Bacillus cereus W]
Length = 303
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/299 (10%), Positives = 89/299 (29%), Gaps = 17/299 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++WG ++ + +S ++ S R L + P + L
Sbjct: 1 MKRWQMEWLLVSVALVWGANYTIGKYGVAFMSSIQFNSLRFLVASPVLLLITFLMERSLR 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + ++ ++ F+ ++ S ++P+ + L +
Sbjct: 61 IERKDWLR-----LVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHK 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV-----------TWSAYCFARKTI 188
+ER + I +++ + + L + A W Y + +
Sbjct: 116 QERFSMKVQIGSIVAFIGAAFVLLTGHTGGATYEYAWLGNIIGLVAAIAWGWYPILAQPL 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S L + + + + F ++
Sbjct: 176 ITKYSAMRVTSWSTLIGIVPLVIYCLFNVNTLTWPVDMLSWGSLAYSIIFATIFGLAMWY 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
GI + + V + Y PL ++ + + + I+ ++ + I+ I + V +
Sbjct: 236 VGISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFIGLYVVKKGGIKK 294
>gi|317403887|gb|EFV84360.1| integral membrane protein DUF6 [Achromobacter xylosoxidans C54]
Length = 295
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 77/288 (26%), Gaps = 12/288 (4%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ G + A L G T + ++ + + + R +LP L
Sbjct: 1 MNRTQGYACLAAAMALVGSTVVASKIIAAGLPPFTATAMRFALALPCFALLGWLAGARLP 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + + + + I L P++S + L
Sbjct: 61 RLD----RRDWLLLAAQAIAGSVGYTTLLIAGLRRTSAVDGGVILGTLPLVSAAVAIAVL 116
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI-------AVTWSAYCFARKTIPVGS 192
ER ++A + +MT I AV +
Sbjct: 117 GERPGKATLLAIATAAAGVWLMTHGEAASGAGSWIGNALVLGAVLCEGLFILLQKRLRAP 176
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + AI + + L + F ++ G +
Sbjct: 177 VPPLALSTLMCAIGLAVCLPASLAEAPWTLALSGEALLAVAYYALVPTVAGFVLWYAGAE 236
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
R S + AP+ ++ + +L + + + V+ A+++
Sbjct: 237 RVAGSEAALFTAIAPVSAVLLAALLLDESMSARQLAGMACVLGAVLIL 284
>gi|241951914|ref|XP_002418679.1| transport protein, putative [Candida dubliniensis CD36]
gi|223642018|emb|CAX43984.1| transport protein, putative [Candida dubliniensis CD36]
Length = 461
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/291 (8%), Positives = 72/291 (24%), Gaps = 24/291 (8%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
+ +++ R+ + + K + + F
Sbjct: 134 TPIHPAQILFVRMFITYICCLLYMAITRSVPDAPFGPKPIRKLLLLRGLVGFFGVFGMYF 193
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
+ L +F + F+ L + + +L ++ + T G
Sbjct: 194 SLQYLSLSDAVALTFLVPMVTAFLAFVLLHEKYSILEAICSVFSLAGVVLIAKPTFIFGN 253
Query: 168 PLLSL-----------------------AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
S+ + I + + + L
Sbjct: 254 ESNKETGNDETIESSSSEKRILATIVGLIGVCGASSVYIVLRKIGMNAHPLLSVSYFALT 313
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ ++ N + G F+ + G++R K + +M Y
Sbjct: 314 CCIVTFLAILVIPSLTFVLPTNAYQWILFFIIGFSGFFMQFSLTAGVQRVKAARASLMAY 373
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVI-AMVVYLLPTVINSGKNKTK 314
+ + +V + I + + +++ A+++ NK
Sbjct: 374 SGMIFAVVWDLTIWHHFPGILSFLGITLIIGNAIIILKFKPQQEETNNKPA 424
>gi|152985825|ref|YP_001350874.1| hypothetical protein PSPA7_5553 [Pseudomonas aeruginosa PA7]
gi|150960983|gb|ABR83008.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 284
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 81/279 (29%), Gaps = 11/279 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A + + + + E++ R ++ +
Sbjct: 9 GVLLAVLASFTFSVMNALVKEASATLPAAEIVFFRSAIGTLLIYLLM--------RQAGV 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + V ML+ + A++ + YA+ S ++P + ++FL ER+
Sbjct: 61 SLSRQGVPMLLVRGVMGALYLVCYFYAIAHIPLADASILAHMSPFFVILFSALFLGERIP 120
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L+++L L++ S+ A+ + FA +
Sbjct: 121 PAVYGLLLVVVLGALMIVKPFSYSSYSVYAAIGLLSAVFAAGASVAIRQLSARHHTYEIV 180
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPD--TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + F+ L+ G+++ + + V +
Sbjct: 181 FYFLAVATLVAIPLMWNDFVVPATLREWGLLLAIGVVSLLGQVFLTRAFSHESATIVAVT 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y + + D + ++V+A +
Sbjct: 241 RYIGIVFNAGWGWLFWSEVPDGLTIAGGVLIVVACIALS 279
>gi|33593395|ref|NP_881039.1| putative integral membrane protein [Bordetella pertussis Tohama I]
gi|33572751|emb|CAE42679.1| putative integral membrane protein [Bordetella pertussis Tohama I]
gi|332382804|gb|AEE67651.1| putative integral membrane protein [Bordetella pertussis CS]
Length = 296
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 77/284 (27%), Gaps = 16/284 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ +W + + + + + + I+ R L +F +V L
Sbjct: 9 VGLMLLTIFVWAGSWIAMKLVVPYIGPFDFIAVRYLAGAVVLFSILVATGRPLG------ 62
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P L+ +AT + GF AL++ S + P V ER
Sbjct: 63 -MPPWKLTLLAAATQITGFQGFVQTALISGGVGKVSLMAYTMPFWVVLFAWALQGERPTA 121
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFA--------RKTIPVGSSEGFF 197
L + L+ +A+ + R F
Sbjct: 122 RHWGGIALAAVGLVCFLDPWAGLGDLAPVALGLCSGLCWGLGTVLSKRMFERHAPDIMTF 181
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+L + + G + + + ++ ++R S
Sbjct: 182 TAWQMLLGGVVILPFAWLVPQIPAQWGGWRLWLGMSYIVLVATALGWILWLLVVRRVPAS 241
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G+ P++ ++ + IL + +++ + V
Sbjct: 242 IAGLSSLGVPVVAVLLAWAILGERPTLTEMAGMALILFGLWVVS 285
>gi|320175453|gb|EFW50552.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Shigella dysenteriae CDC 74-1112]
Length = 306
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 85/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + GTLF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGTLFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLMAFLLLRGHKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ L +L+ + + + F S
Sbjct: 63 PPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL-CFSRLFSIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + + + + Y I+ +
Sbjct: 182 AIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + + + G++V A+V+ L + K
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAK 293
>gi|300698304|ref|YP_003748965.1| multidrug ABC transporter permease [Ralstonia solanacearum
CFBP2957]
gi|299075028|emb|CBJ54598.1| putative transporter, permeases of the drug/metabolite transporter
[Ralstonia solanacearum CFBP2957]
Length = 291
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 90/292 (30%), Gaps = 13/292 (4%)
Query: 32 CAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKA 90
A ++W + ++ V + +R L + + F + P
Sbjct: 2 LAVLVWAANTIISKAAAGVVDPAAISFYRWLIAAVVLTP----FWARPLWRQRREVLPWL 57
Query: 91 VGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
+ V + L ++ YA + + P++ + + SV ++ + +
Sbjct: 58 PRLSVLALLGLVLYQCLSYYAAHSTSATNMGVICALIPMLGLIINSVVFRQPVGAPAVAG 117
Query: 151 ALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
+ +L +L + L G+ + + + +AY +
Sbjct: 118 VAVSLLGVLYLLGRGHPASLLDGGVNHGDVLVVIGSAAYALYNILYRRWAPPFGQWMNLY 177
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L ++ + + + L + + G+ R +M
Sbjct: 178 LQALLAVVMLLPLALTAQSLAVPRQGIGMVLFAGIGASIVAMYWWMLGLARLGSERTVVM 237
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
P+ V + +L + + I G++++ + + + G+N+ +
Sbjct: 238 MNLLPVFTAVMASAMLGETVQGYHWIGGGLILLGVSLVQGIVTLPMGRNRLR 289
>gi|307726521|ref|YP_003909734.1| RarD protein, DMT superfamily transporter [Burkholderia sp.
CCGE1003]
gi|307587046|gb|ADN60443.1| RarD protein, DMT superfamily transporter [Burkholderia sp.
CCGE1003]
Length = 296
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/291 (19%), Positives = 111/291 (38%), Gaps = 4/291 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG---L 78
G A ++ + Y L + L++ + R++W++PG +
Sbjct: 5 SPRRGIALSVSACAMFALLSAYATLLAPLGGLDIFAWRIIWTVPGALALVALRKRMPILR 64
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ + P V +A +L F++A L + S YF+ P++ V +G +
Sbjct: 65 QLVYRMVTQPLLGVATVTAAALLGAQLWVFLWAPLHGRMLEVSLGYFLLPLVMVLVGRFY 124
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ERL LQ A L + + +G + F + S F
Sbjct: 125 YRERLEPLQWAAVLCAAVGVAHELWSTGAFSWPTLLVALGYPPYFVLRRKIQFDSLAVFT 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+L +PA V +G S ++ L L G G L++ + + ++
Sbjct: 185 VEMILLLPAAVAFVVSGGSLPLIAGRLDM-WLLLLPGLGALSTLALASYLTASRLLPVAL 243
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
GI+ Y P+L+++ SV +L + + + + IA+ + L ++
Sbjct: 244 FGILGYVEPVLLVLVSVTLLGETLSAALLATYVPIWIAVALTALHSMRFVR 294
>gi|184155661|ref|YP_001844001.1| transport protein [Lactobacillus fermentum IFO 3956]
gi|260663053|ref|ZP_05863946.1| drug/metabolite exporter family protein [Lactobacillus fermentum
28-3-CHN]
gi|183227005|dbj|BAG27521.1| transport protein [Lactobacillus fermentum IFO 3956]
gi|260552674|gb|EEX25674.1| drug/metabolite exporter family protein [Lactobacillus fermentum
28-3-CHN]
gi|299783373|gb|ADJ41371.1| Drug/metabolite exporter family protein [Lactobacillus fermentum
CECT 5716]
Length = 303
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 84/282 (29%), Gaps = 12/282 (4%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ---VSVLEVISHRVLWSLPGVFFAIVYF 74
N G L A WGI+ Q + Q + ++S R + + +
Sbjct: 2 NNYRRVSRGILLAALASGSWGISGTVLQLISQNLAIPAPWMLSMRTFSAGVLLLAISLVL 61
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
G A+ ++ ++ L + F YA+ T + + ++ P+ V L
Sbjct: 62 YG-KKTFAIFADKRSALSVITYAIFGLMANLLTFYYAIQTGNASMATILQYLAPLFIV-L 119
Query: 135 GSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
GSV +R ++A ++ ++ +++ L++ +
Sbjct: 120 GSVVRGQRPIRSDVLAFVIALVGVVLCITRGDFAHLAIPLVSLLWGIGSGITAAFYVVLP 179
Query: 195 -------GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
+ + + A + + F +
Sbjct: 180 RKANETNPPLVVLGWGTMIAGILFNLYHPFWVNPPHVTVTLVGSVATVVLFGTAIPFGLL 239
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
I A V IM+ P++ + SV ++ V +
Sbjct: 240 LEAIHFAPSDVVSIMDAVQPIVTTILSVIFFSLNLNWVEALG 281
>gi|160942915|ref|ZP_02090154.1| hypothetical protein FAEPRAM212_00391 [Faecalibacterium prausnitzii
M21/2]
gi|158445816|gb|EDP22819.1| hypothetical protein FAEPRAM212_00391 [Faecalibacterium prausnitzii
M21/2]
Length = 305
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/294 (7%), Positives = 83/294 (28%), Gaps = 12/294 (4%)
Query: 28 LFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYF-------SGGLSL 80
+ + ++WG + + ++ R ++ + + F
Sbjct: 9 MLLMLCALIWGTAFVAQSAGSGMGAFSFLAGRSWMAVLVLIPTVKAFDALHHRQGRPDGK 68
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
K + + + T+L + + + V+ V + +FL
Sbjct: 69 PKTAAERKLLLKAGLVCGTLLFLASAAQQLGITLDPSTAKAGFLTAMYVVLVPVFGLFLG 128
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA-----IAVTWSAYCFARKTIPVGSSEG 195
+ + ++ + ++ L ++ + G + + + ++ +G
Sbjct: 129 RKSSAQLWVSMAIAVVGLYLLCMKDGFGSIQSSDGLLLLCAVLFSFQIMAVDHFSPQMDG 188
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + + ++ V L + + + + G +
Sbjct: 189 VRLSLVEFFVVSVESTVAAFLFEQPAMAEFVTYAGPILYCGIMSSGVAYTLQILGQRDLN 248
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++ + + +L Q + + ++ A+V+ LP
Sbjct: 249 PAIASLIMCLESVFSALGGWLLLHQNLSFRESTGCVLLFAAVVLAQLPLGRLMR 302
>gi|85704328|ref|ZP_01035431.1| membrane protein, putative [Roseovarius sp. 217]
gi|85671648|gb|EAQ26506.1| membrane protein, putative [Roseovarius sp. 217]
Length = 305
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/285 (9%), Positives = 78/285 (27%), Gaps = 11/285 (3%)
Query: 34 YILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++WG + ++ L V + + R++ + + L L+
Sbjct: 16 GMIWGASFMFVSVALTGVGPFFLAAVRIVLGAGFLLCLLRIKGRKLPPLRQGDGQRIWRF 75
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ + + +A + P++ + L + L+ +
Sbjct: 76 ALIMALFSNVFPFILLSWAQQSVASGFAGVCMAAVPLLILPLAHFLVPGERMSLRRLVGF 135
Query: 153 LIILSLLIMTLHSGIPLLSL----------AIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
++ +++ + + + + T + + V
Sbjct: 136 VLGTVGVVVLIGPDAFTSTGKDLESLARLACLGAAGGYAIGSIATRLSPEVDRLSLSALV 195
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + A V G L L L + + A S ++
Sbjct: 196 LMLAAGIIVPVAMVVEGWPTALNMKSLLALLYLGILPTGVAQLLLVQVNREAGPSFFSLV 255
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
Y P+ ++ +L + + +++I + + +
Sbjct: 256 NYMVPVWSVILGALVLSEALPPSLLAAMTLILIGVGMSQWGALRR 300
>gi|318059270|ref|ZP_07977993.1| hypothetical protein SSA3_15076 [Streptomyces sp. SA3_actG]
gi|318075264|ref|ZP_07982596.1| hypothetical protein SSA3_00705 [Streptomyces sp. SA3_actF]
Length = 316
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 67/257 (26%), Gaps = 3/257 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ ++WG + L + V VL V+ R ++ + ++
Sbjct: 11 LVLVALVWGSSYLVAKSATDVLPVLAVLFARYALGALACGAVVLVRRRAW--TRTEVRAG 68
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+G+ + +L + A + + +
Sbjct: 69 ALLGVTQAAVLVLETYGVAHTSAAHAGLLISLTIVLTPPLDRTRPPLPARFYAAALLCVV 128
Query: 149 IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPAL 208
L+ G L+ A V + + + + +
Sbjct: 129 AVGLIGAGGEGFGLPRGGDLLMLGAAVVRAGHVALVGRVTARHRVDPVHLTTVQMVTGTV 188
Query: 209 FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPL 268
+ + G + L L F F ++ ++R S ++ T P+
Sbjct: 189 LVLPFAVRHFGALAASDAATGSRLLYLALLCGLFAFLAQTWAVQRTSASRASLLLGTEPV 248
Query: 269 LMIVSSVFILKQPIDTV 285
+ + + + + +
Sbjct: 249 WAVATGLVVGGERLTPW 265
>gi|254476034|ref|ZP_05089420.1| possible transporter, RhaT family, DMT superfamily [Ruegeria sp.
R11]
gi|214030277|gb|EEB71112.1| possible transporter, RhaT family, DMT superfamily [Ruegeria sp.
R11]
Length = 326
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 78/284 (27%), Gaps = 8/284 (2%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
K + + L + + + + + L + + I + VF
Sbjct: 20 KGPTDMNNVTAILLIIVSMAGFTLEDTVIKQLAKTMPVGQILVMLGIGSGAVFVIWAKLQ 79
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
G L + + + + ++ + T + VT ++FLG
Sbjct: 80 GHRVLARHNWRWRPVLRASTEALAAVSFATALATVDISTVAAVFQAMPLAVTMGAALFLG 139
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + A L+ L +L++ P + L + + T + S
Sbjct: 140 E-----EVGWRRWSAILVGFLGVLMIVRPGLAGFEPNVLLVLVAVVAVAARDLMTRVMDS 194
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + + ++ D L L + +
Sbjct: 195 AVPSTVVSSQAFGSLVVGGMVMLWTLPGEPVALGQNDWLLLAAGIGFGVLAYSCIVTATR 254
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIA 296
+ V YT + I V I + D + +++ +
Sbjct: 255 IGDAAVVTPFRYTRLVFSIAVGVVIFGEQPDMMTLGGSALIIGS 298
>gi|330972116|gb|EGH72182.1| RarD protein [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 294
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 109/295 (36%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G + A L+G+ YT + + E+ R+L ++P ++ + +
Sbjct: 3 KGVVLSVLASTLFGVMYFYTSLMTPLDGEEIFGWRMLLTVPCATLFMLVSGDWRRVREVA 62
Query: 85 LKNPKAVGMLVF---SATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
++ + ++ S+ +L F++A L + S YF+ P+ + G V E
Sbjct: 63 VRLRQQPLLIFALLLSSVLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMILTGRVVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L++LQ +AA+ ++ + G + F + G +
Sbjct: 123 HLSYLQKVAAVFAMIGVGHELWRLGSFSWETLLVAGGYPLYFVLRRKLKTDHLG---GLW 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L +W G L + G++++ + + S G+
Sbjct: 180 FDMLLMLPIGLWFIAHGHPQAIQQAPLLYLLIPLLGVISASALVSYILASRLLPFSLFGL 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y P+L++ ++ + + I + + + +A+VV ++ + + + +
Sbjct: 240 LSYVEPILLVGVALLLG-ESISRDEWLTYLPIWLAVVVLMIEGAKHMLAQRRRDA 293
>gi|210620970|ref|ZP_03292355.1| hypothetical protein CLOHIR_00298 [Clostridium hiranonis DSM 13275]
gi|210154954|gb|EEA85960.1| hypothetical protein CLOHIR_00298 [Clostridium hiranonis DSM 13275]
Length = 330
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 84/283 (29%), Gaps = 15/283 (5%)
Query: 27 TLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
F+ A ILW L+ L +S +V R+ + + + +
Sbjct: 28 YAFIAMAGILWSTLGLFGNILMERGLSSEQVAFTRLFIGFIVLSLYSLIRRPEVLKINL- 86
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + + A+ + + + +P+ + KE++
Sbjct: 87 ---KGLLYCGAIGIICQGLFNKCYFKAVEVTGVSIAAVLLYTSPLFLAVFSKIVYKEKMT 143
Query: 145 HLQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
+II+ +L + ++ ++ +A A +
Sbjct: 144 RAKIISLILCCIGAIMAVTGGVLDLEGINTYGIIMGIMAAITYALMPIISKNALKEFSSE 203
Query: 197 FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR-AK 255
I + A+F + F ++ + + ++ GI R +
Sbjct: 204 TILIYGFLFGAMFMIPSAKPVEMMGFVTNMNVLPYMILLGVFPAAMAYIFYAEGIARGCE 263
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
LS VG++ + + ++ + + I I+ ++
Sbjct: 264 LSIVGVVASVELIAASIIGWTVVGEVFTIGKAIGVAIMFVSAF 306
Score = 38.0 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 42/134 (31%)
Query: 173 AIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLF 232
+ WS + + L I + +++ E +
Sbjct: 33 MAGILWSTLGLFGNILMERGLSSEQVAFTRLFIGFIVLSLYSLIRRPEVLKINLKGLLYC 92
Query: 233 LIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGI 292
+ + ++ +S ++ YT+PL + V S + K+ + + I +
Sbjct: 93 GAIGIICQGLFNKCYFKAVEVTGVSIAAVLLYTSPLFLAVFSKIVYKEKMTRAKIISLIL 152
Query: 293 VVIAMVVYLLPTVI 306
I ++ + V+
Sbjct: 153 CCIGAIMAVTGGVL 166
>gi|261346183|ref|ZP_05973827.1| putative membrane protein [Providencia rustigianii DSM 4541]
gi|282565839|gb|EFB71374.1| putative membrane protein [Providencia rustigianii DSM 4541]
Length = 306
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 91/281 (32%), Gaps = 11/281 (3%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A +LW + + + IS W+L + L K +
Sbjct: 4 FLFPLIAVLLWSMNAIVNKAAATAIDPAAISF-YRWALAFLVMTPFVLRSVLRHAKIIKQ 62
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + + A + ++ YA T P+++V + L+
Sbjct: 63 HWW--QLAILGALGMMLYQSLAYYAAHTVSATFMGVMNSFIPLLTVVISIFVLRVIPTVG 120
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+I +LL + L + G+ L + V +AY + +
Sbjct: 121 IVIGSLLSLFGLAWLVSQGNPSSLLDNGLGQGELLMIVASAAYALYGVLTKRWAIQLSSW 180
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + I ++ F + L L + ++ G+ +T
Sbjct: 181 DSLYVQIFFGVLLLIPNFLLADDVSLNRDNVGLVFFAGIAASIIAPALWIKGVIHLGANT 240
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I AP+ + +VF L + + + I G+V++ +++
Sbjct: 241 ASIFMNLAPVFTAIIAVFTLGEELKSYHLIGGGVVLLGVML 281
>gi|254460415|ref|ZP_05073831.1| Integral membrane protein DUF6 [Rhodobacterales bacterium HTCC2083]
gi|206677004|gb|EDZ41491.1| Integral membrane protein DUF6 [Rhodobacteraceae bacterium
HTCC2083]
Length = 291
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/285 (8%), Positives = 66/285 (23%), Gaps = 2/285 (0%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ L +W + + + L +S R S L
Sbjct: 3 LRALLMGLAFAFMWSSAFTSARIIVQDAPPLMSLSLRFFISGVIGIAIAKALGQHWRLTA 62
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ G+ + + ++ V + L +
Sbjct: 63 AQWRAVFVFGLCQNALYLGLNFMAMQTVEASLASIIASTMPLMVAGAGWILLKDKLPTQG 122
Query: 143 LNHLQI-IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
+ L + I +++I+ + I + I
Sbjct: 123 IIGLFLGIVGVVLIMGARFDGNADAFGMALCVIGAIGLSVATLAMRGASSGGNLLMIVGL 182
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ + + V F+ F + I+ ++R
Sbjct: 183 QMLVGSAILGVVAAFTETYFLNPSLKLAAAFAYTTLIPGLVATFIWFRLVERIGALRAST 242
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
+ P + + +L + + + I+ + +++ L
Sbjct: 243 FHFLNPFFGVTIAALLLGEALGIMDVFGVVIITVGILLVQLSKQK 287
>gi|313109824|ref|ZP_07795759.1| putative membrane protein [Pseudomonas aeruginosa 39016]
gi|310882261|gb|EFQ40855.1| putative membrane protein [Pseudomonas aeruginosa 39016]
Length = 283
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A + + + + E++ R ++ +
Sbjct: 8 GVLLAVLASFTFSVMNALVKEASATLPAAEIVFFRSAIGTLLIYLLM--------RQAGV 59
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + V ML+ + A++ + YA+ S ++P + ++FL ER+
Sbjct: 60 ALSRQGVPMLLVRGVMGALYLVCYFYAIAHIPLADASILAHMSPFFVILFSALFLGERIP 119
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L+++L L++ S+ V + FA +
Sbjct: 120 RAVYWLLLVVVLGALMIVKPFSYSSYSVYAVVGLLSAVFAAGASVAIRQLSARHHTYEIV 179
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPD--TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + F+ L+ G+++ + + V +
Sbjct: 180 FYFLAVATLVAIPLMWNDFVVPATLREWGLLLAIGVVSLLGQVFLTRAFSHESATIVAVT 239
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y + + D + ++V+A +
Sbjct: 240 RYIGIVFNAGWGWLFWSEVPDALTIAGGVLIVVACIALS 278
>gi|294083710|ref|YP_003550467.1| hypothetical protein SAR116_0140 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663282|gb|ADE38383.1| hypothetical protein SAR116_0140 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 277
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/277 (12%), Positives = 87/277 (31%), Gaps = 7/277 (2%)
Query: 38 GITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFS 97
L + +E +++ +R + V + + V M
Sbjct: 2 SFVGLCMRLIETADGFQILMYRSISLCAMVALVCCLRRRVGLVSFLRGLDRHDVAM---- 57
Query: 98 ATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILS 157
T+L++ + +++++L T F + P ++ +G V++ E+ + + A + I
Sbjct: 58 GTMLSIAFSTYVFSMLYTSVASTLFILTIAPFMAAIIGWVWIGEKPHPVTWFAMIGAIFG 117
Query: 158 LLIMTLHS---GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ +M G +L V+ + + + I A +
Sbjct: 118 VGLMIGDGIEMGRTFGNLLALVSALCFAVMLVLARRSRKQDVLGGTFLGGIFAFLIGLVA 177
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
G + + L ++G + V ++ +L +
Sbjct: 178 NGVTGIGLEVTPRDLGIILFMGAFTIGIGIAFVTWGASYVPAAEVSLLVLIESVLGPIWP 237
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
L + + + I V++A+V+ + T
Sbjct: 238 WLFLGEALSLMEIIGGVTVMLAVVMMTIFTRKTLSSR 274
>gi|282854290|ref|ZP_06263627.1| putative membrane protein [Propionibacterium acnes J139]
gi|282583743|gb|EFB89123.1| putative membrane protein [Propionibacterium acnes J139]
Length = 318
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 85/295 (28%), Gaps = 16/295 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + + LWG T + + + +S +++ R +
Sbjct: 5 RSSRLAVPALLLMAALWGSTLVVMKGVYAHMSPENLLACRFAMAAAAFGIL--------- 55
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K N + + V + A L T Q + F + V + L +V
Sbjct: 56 FPKAWRANMRTIAKGVILGVLFAAGQLLQAIGLGTTQAAMNGFITSLYVVFTPLLAAVIF 115
Query: 140 KERLNHLQIIAALLIILSLLIM------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+++++ A L + + ++ L +A + T +
Sbjct: 116 RKKVSTAIWGAVALATVGMGVLALDPSTLGSGFGIGQLLTLASAVAYAGHIVATGRFANP 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
I GG + + + S+G R
Sbjct: 176 SNVTSLGLYQTITVAIVCTIAALPGGLSAPTHMEDWFALAYLAIICGTLTTFMQSWGQAR 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + ++ T PL V ++ + +P+ TI ++ AM + + P
Sbjct: 236 VESTRAAVIMCTEPLWGAVFAIGLGGEPLTGRITIGGIAILAAMALVVRPPHRRR 290
>gi|254510509|ref|ZP_05122576.1| hypothetical protein RKLH11_1044 [Rhodobacteraceae bacterium KLH11]
gi|221534220|gb|EEE37208.1| hypothetical protein RKLH11_1044 [Rhodobacteraceae bacterium KLH11]
Length = 304
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 97/301 (32%), Gaps = 16/301 (5%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISH-RVLWSLPGVFFAIVYFSGG 77
+ G + + +L + + L + + L ++ R L + I
Sbjct: 2 TQDRPVFGIILMLGFCVLAPLGDGMAKLLGETTALGLLVLVRFLVQAIILVPLIALTGRS 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ L+ + + + + AL T FV P I + LG
Sbjct: 62 WRMPPRVLR------LTLIRTVLHIIGIAAMFTALQFLPLADTIAIAFVMPFIMLLLGKY 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAI---------AVTWSAYCFARKTI 188
L E++ ++IA ++ L L++ S + + A+ A+ K
Sbjct: 116 VLGEQVGPRRLIACVVGFLGTLLVIQPSFAQVGAPALLPLIVAVVFALFMLVTRQIAKDT 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
S + M + + + + + L+G G+L + + +
Sbjct: 176 DPVSLQAVSGTMATVFLLPIILLGSQTDLPALSLRMPPPGALWLLLGIGVLGTVAHLLMT 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ ++ A +T+ M+Y + I + + + I + A + +L ++
Sbjct: 236 WSLRYAPSATLAPMQYLEIPVATFFGWLIFHDLPNGLAALGIAITIAAGLYIILHERASA 295
Query: 309 G 309
Sbjct: 296 R 296
>gi|220919289|ref|YP_002494593.1| protein of unknown function DUF6 transmembrane [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219957143|gb|ACL67527.1| protein of unknown function DUF6 transmembrane [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 290
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 76/297 (25%), Gaps = 16/297 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ S P L A +WG T + T L R L + +
Sbjct: 4 SVSSPRWRDVLLTAVAPAIWGSTYIVTTELLPPHRPFTAALLRALPAGVLLVLVA----- 58
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ +LV A + V A G L + V P++ + L
Sbjct: 59 -----RRVPVRRDWPRVLVLGALNIGVFQALLFVAAYRLPGGLAAVLGAVQPLLVMALAW 113
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCF-----ARKTIPVG 191
+ +A+ I + ++ L + IA +
Sbjct: 114 GVDGRVPARATLASAVSGIGGMAVLLLSPQTVFEPVGIAAALAGAACMAGGVWLTRRWRL 173
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ L + L + L + + ++ G+
Sbjct: 174 DLPVLALTGWQLVVGGLMLAPLAWLADPPLPVLSRSQVLAYAYLSLAGALVSYALWFRGV 233
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
R V + +PL +V +L Q + IV+ +++
Sbjct: 234 ARLPTVAVSSLGLLSPLTAVVLGWALLSQAMSGASLAGMAIVLASVLGVQWTASRTR 290
>gi|270308313|ref|YP_003330371.1| transport protein [Dehalococcoides sp. VS]
gi|270154205|gb|ACZ62043.1| transport protein [Dehalococcoides sp. VS]
Length = 287
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 13/263 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + W + L S + R L + + V L D
Sbjct: 6 LISLIFTTLFWASAFAAIRVGLADYSPSHMALLRFLVASLALIIYAVITRMRLPDKSD-- 63
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + ++++ Y T S P+ SV L F K++L
Sbjct: 64 ----LPVIFLLGLVGISMYHSALNYGEKTVTAGAASLIIAAAPIFSVLLARFFYKDKLTP 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSSEGFFIE 199
+ +L ++I+TL G L +A ++ + + GF
Sbjct: 120 AGWLGIILSFGGIVIITLGEGQTLSFEPHAIFVLLAAICTSIYIVFQKPLLKKYSGFEFS 179
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
+ L +V+ E + + + ++SY + +A+ + V
Sbjct: 180 TYAIWAGTLLLMVFAPGLLKEISESPPSSTLAVVYLGIFPTAISYLLYSYALSKARTAQV 239
Query: 260 GIMEYTAPLLMIVSSVFILKQPI 282
Y P+ I + F L +
Sbjct: 240 ISFLYLNPVFAIGIAFFWLGEIP 262
Score = 37.2 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 29/105 (27%)
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
M +L + + + + S +YG K
Sbjct: 35 MALLRFLVASLALIIYAVITRMRLPDKSDLPVIFLLGLVGISMYHSALNYGEKTVTAGAA 94
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ AP+ ++ + F K + + + +V+ L
Sbjct: 95 SLIIAAAPIFSVLLARFFYKDKLTPAGWLGIILSFGGIVIITLGE 139
>gi|154249918|ref|YP_001410743.1| hypothetical protein Fnod_1239 [Fervidobacterium nodosum Rt17-B1]
gi|154153854|gb|ABS61086.1| protein of unknown function DUF6 transmembrane [Fervidobacterium
nodosum Rt17-B1]
Length = 295
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 86/273 (31%), Gaps = 2/273 (0%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L ++G++ L+T+ L+ V V +S+R + + ++ K
Sbjct: 6 ILSGLAMSFIFGLSFLFTKNALDYVPVYTFLSYRFFVATVAM-LVLISSRIVKLEKKPYW 64
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K K I + F + V + + + +
Sbjct: 65 KLWKVAIFQPVLYFIFETNGLKFAASSEAGMLIAMIPIVIVILSPFLLKEKIKWFQIVFA 124
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
+++I+ S L + AV +A+ + I ++
Sbjct: 125 FMSFIGVVLIIGYGEKMSGSLFGKLLILGAVFSAAFYNIFSRKLSKQFKPEEITFFMMVT 184
Query: 206 PALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
LF+ + F+ L L ++ F + ++ + + + +
Sbjct: 185 GFLFFTSLSIFTRQFTLNFAKPVIISALYLGILSSTVAFFLVNFMVSKVSPTISSLFSNL 244
Query: 266 APLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
++ +++ I + I ++ + ++++A+
Sbjct: 245 TTIVSVLAGSIIRNEVIRPLQILGMVMILVALF 277
>gi|319941287|ref|ZP_08015618.1| hypothetical protein HMPREF9464_00837 [Sutterella wadsworthensis
3_1_45B]
gi|319805208|gb|EFW02031.1| hypothetical protein HMPREF9464_00837 [Sutterella wadsworthensis
3_1_45B]
Length = 309
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 82/292 (28%), Gaps = 14/292 (4%)
Query: 30 VFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL---------S 79
+ ++WG T + ++ V + R+L + ++ L
Sbjct: 18 LLLTAMIWGATFVAQSLGMDSVGPFTFTTTRMLLGAFFLLPIVLLRRKRLAAEKPAEAAR 77
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ +G ++ + + + + F + V +
Sbjct: 78 RSAPQYRRTLLMGGILCGLCLFGGESLQQFGFVHDTEVGKSGFITALYIVFVPIISLFLG 137
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF--- 196
+ L AL ++ + G + + + V A F+ + +G
Sbjct: 138 RRGSPLLWAAVALSLVGLWFLCIPPEGFTIAAGDLFVLACAVVFSLHILVIGRYVLLVDA 197
Query: 197 -FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ M ++ + L + N + + G +
Sbjct: 198 VELSMMQFFCGSILAFFAMLALESPTWIGWQTALPAMLWAGIMSNGIAYTLQIVGQRGMN 257
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+T ++ + ++S IL + + + ++ A+V+ LP
Sbjct: 258 DTTSSLILSLESVFSVISGWLILNEVLSVREGLGCVLMAAAVVLAQLPGNKK 309
>gi|238759056|ref|ZP_04620226.1| hypothetical protein yaldo0001_22630 [Yersinia aldovae ATCC 35236]
gi|238702733|gb|EEP95280.1| hypothetical protein yaldo0001_22630 [Yersinia aldovae ATCC 35236]
Length = 299
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 89/281 (31%), Gaps = 13/281 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A I+W I + ++ + + +R L +L + ++ +
Sbjct: 9 LFPLFAVIIWSINAVVSKVSATAIDPAAISFYRWLLALLTLTPFLL----MGVIRNWQAV 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+++ + ++ YA + + P+++V + + L+
Sbjct: 65 RIYWWKLMILGLLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISILLLRVVPTIG 124
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
+ ++L + L+ + GI L + +Y S
Sbjct: 125 IALGSVLSLGGLVWLVSAGNPAELLQHGIGKGELMMLAASMSYALYGVLTKRWSIPLPNW 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + I ++ F L L L + ++ G+ R +T
Sbjct: 185 QSLYMQIVFGVVLLLPNFLIASDVQLTAQNIPLVLFAGIPASIMAPYLWIQGVMRLGANT 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
I P+ + +V +L + + + I I + +++
Sbjct: 245 ASIFMNLTPVFTAIIAVTLLHEQLHSYHLIGGSITLAGVIL 285
>gi|254511672|ref|ZP_05123739.1| Integral membrane protein DUF6 [Rhodobacteraceae bacterium KLH11]
gi|221535383|gb|EEE38371.1| Integral membrane protein DUF6 [Rhodobacteraceae bacterium KLH11]
Length = 296
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 85/259 (32%), Gaps = 8/259 (3%)
Query: 50 VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFI 109
+ +++ R L++ + A+ L G+ + + +
Sbjct: 41 LHPMQISHGRFLFAFLVLVSAVGVLRPQLR--------RPHWGLHIGRTSFGWLGITLMF 92
Query: 110 YALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPL 169
++ + F+ PV ++ L LKE + + +AA + +L L++ +
Sbjct: 93 ASVAYIPIADATAISFLNPVFAMVLAIPLLKEGVGPWRWLAAAVALLGALVLLRPTPASF 152
Query: 170 LSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPD 229
A+ +A + I + G I + +L I + + F
Sbjct: 153 QPAALLALTAAMVIGMELIFIKKLSGREIPIQILLINNAMGLTIASVAVSFVFQWPTPQQ 212
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
+ L G G L + F G+ RA S V + Y + + K D + I
Sbjct: 213 WVALAGIGGLMACAQACFVNGMARADASFVAPISYATLIFAAFYDFAVFKVIPDGISLIG 272
Query: 290 FGIVVIAMVVYLLPTVINS 308
I++ ++ +
Sbjct: 273 SAIILTGGLILVWREARQR 291
>gi|126730266|ref|ZP_01746077.1| membrane protein, drug/metabolite transporter (DMT) family
[Sagittula stellata E-37]
gi|126708999|gb|EBA08054.1| membrane protein, drug/metabolite transporter (DMT) family
[Sagittula stellata E-37]
Length = 307
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 85/277 (30%), Gaps = 16/277 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
A I+WG + + + FL L V R L + + +
Sbjct: 8 LALTALAPIIWGSSYIVSTEFLPGWPPLVVGLLRALPAGLVLLAI----------TRRLP 57
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ + A V WG A G + + + P+ L S+ L L
Sbjct: 58 SRDWLGRVALLGALNFTVFWGALFIAAYRLPGGVAATLGALQPLFVTVLASLLLGAPLRL 117
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAI-----AVTWSAYCFARKTIPVGSSEGFFIEM 200
++AAL + ++ L G L + + A +
Sbjct: 118 AAVLAALAGAGGVGLLILGPGAELDPVGVVAALVGALSMATGMVLTLKWTPPVDRLTFVA 177
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
L + + GG+ + + + + + IF G+
Sbjct: 178 WQLTAGGVLLIPVALIVGGDVPAVDLKAVAGLVWLGLIGGALTYVIFFRGMSILGAPVAS 237
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
+ + +PL + IL Q ++ + I G+V++++
Sbjct: 238 GLGFLSPLSAVTLGWVILGQALNARQLIGAGVVLLSV 274
>gi|117621377|ref|YP_856515.1| putative transporter [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562784|gb|ABK39732.1| putative transporter [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 309
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/287 (9%), Positives = 89/287 (31%), Gaps = 21/287 (7%)
Query: 30 VFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ +WG + L+ + + RVL++L G+ ++ +
Sbjct: 9 LLLLAAIWGASFLFMRIAAPAFGAVNTTFLRVLFALIGLAVMLLLLRAPMGF------QG 62
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
K ++ A+ + + A L ++ TP++ +G ERL+ +
Sbjct: 63 KLKSAMLLGVINSAIPFLMYAIAALWLPAGYSAILNATTPLMGALIGFSCFNERLDRRKW 122
Query: 149 IAALLIILSLLIMTLHSGIPL--------------LSLAIAVTWSAYCFARKTIPVGSSE 194
+ +L ++ + ++T + + + + + +
Sbjct: 123 LGVVLGVIGISLITTTGEVSAGGHLLPGVLACLFATACYGLAGFLTRSWITHRGGLDAKL 182
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F ++ L + + + + L + + + ++ I
Sbjct: 183 VAFGSQLGASLFLLPFFAYQLAASPAVDWAVPTAWASVLAVGVVCTALAYLLYFRLIADI 242
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ + P I+ +L + ++ + +V +++ +
Sbjct: 243 GPLRSLTVTFLIPPFGILWGALVLGETLNQGFVLGGLVVCLSVWLVT 289
>gi|114773337|ref|ZP_01450541.1| hypothetical protein OM2255_12372 [alpha proteobacterium HTCC2255]
gi|114546271|gb|EAU49182.1| hypothetical protein OM2255_12372 [alpha proteobacterium HTCC2255]
Length = 298
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/292 (14%), Positives = 89/292 (30%), Gaps = 14/292 (4%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFL------EQVSVLEVISHRVLWSLPGVFFAIVYFS 75
P + A I T + + L E + L++ + R ++ + +
Sbjct: 10 PKSQAAFLIVLATIFIAGTMILAKSLGQDWLGESLHPLQISAGRFSFAWMALVIVFIVKK 69
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
+ + + + + + + F+ PV ++ L
Sbjct: 70 PIIKS--------PNLKLHTIRSLLGWSGVTLMFASASMIPLSDATAISFLNPVFAMLLA 121
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEG 195
FLKE++ + IAA L I ++ S + + ++A + I +
Sbjct: 122 LFFLKEKIGKYRWIAAFLAITGAFVLLRPSSNTIQIAGLLALFAAIFMGAELILMKIITR 181
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+L I + + + LI GLL + I A
Sbjct: 182 NESSFQILIINNSIGFTVSACAAYFVWQDPTNLQWFALISIGLLMICAQACYINAIAIAD 241
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
S V Y + + + + Q D + I +++I ++ IN
Sbjct: 242 ASYVAPFSYMTLIFVTLYDFILFNQIPDHISLIGIFLILIGAILLAWREKIN 293
>gi|82543583|ref|YP_407530.1| hypothetical protein SBO_1049 [Shigella boydii Sb227]
gi|81244994|gb|ABB65702.1| putative transmembrane subunit [Shigella boydii Sb227]
gi|332096914|gb|EGJ01903.1| carboxylate/Amino Acid/Amine Transporter family protein [Shigella
boydii 3594-74]
Length = 306
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 86/292 (29%), Gaps = 4/292 (1%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
L + G+LF YI+WG T + +E L + R L + + ++ L
Sbjct: 5 QLLPLFGSLFAL--YIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLMAFLLLRGHKL 62
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
L+ L +L+ + + + F S G
Sbjct: 63 PPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL-CFSRLFGIKT 121
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I A +I+L+ + + + I A+ +
Sbjct: 122 RKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAG 181
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ +LA + + + + Y I+ +
Sbjct: 182 AIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPAL 241
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
Y P++ ++ + + + + + G++V A+V+ L + K
Sbjct: 242 ATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAK 293
>gi|15600027|ref|NP_253521.1| hypothetical protein PA4834 [Pseudomonas aeruginosa PAO1]
gi|107103933|ref|ZP_01367851.1| hypothetical protein PaerPA_01005004 [Pseudomonas aeruginosa PACS2]
gi|218893928|ref|YP_002442797.1| hypothetical protein PLES_52191 [Pseudomonas aeruginosa LESB58]
gi|254238444|ref|ZP_04931767.1| hypothetical protein PACG_04586 [Pseudomonas aeruginosa C3719]
gi|9951103|gb|AAG08219.1|AE004896_9 hypothetical protein PA4834 [Pseudomonas aeruginosa PAO1]
gi|126170375|gb|EAZ55886.1| hypothetical protein PACG_04586 [Pseudomonas aeruginosa C3719]
gi|218774156|emb|CAW29973.1| putative membrane protein [Pseudomonas aeruginosa LESB58]
Length = 284
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G L A + + + + E++ R ++ +
Sbjct: 9 GVLLAVLASFTFSVMNALVKEASATLPAAEIVFFRSAIGTLLIYLLM--------RQAGV 60
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+ + V ML+ + A++ + YA+ S ++P + ++FL ER+
Sbjct: 61 ALSRQGVPMLLVRGVMGALYLVCYFYAIAHIPLADASILAHMSPFFVILFSALFLGERIP 120
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L+++L L++ S+ V + FA +
Sbjct: 121 RAVYWLLLVVVLGALMIVKPFSYSSYSVYAVVGLLSAVFAAGASVAIRQLSARHHTYEIV 180
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPD--TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + F+ L+ G+++ + + V +
Sbjct: 181 FYFLAVATLVAIPLMWNDFVVPATLREWGLLLAIGVVSLLGQVFLTRAFSHESATIVAVT 240
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
Y + + D + ++V+A +
Sbjct: 241 RYIGIVFNAGWGWLFWSEVPDALTIAGGVLIVVACIALS 279
>gi|312882621|ref|ZP_07742360.1| drug/metabolite transporter superfamily permease [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309369706|gb|EFP97219.1| drug/metabolite transporter superfamily permease [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 303
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 99/288 (34%), Gaps = 11/288 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ CA +LW + L++ S +++++ ++ S + + G
Sbjct: 1 MNERRALGLGLCAVLLWSTVATAFKLTLQEFSPIQMLAVAIMVSAGVLLTLCLIQKKGQQ 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+++ + P +L ++ A + + + +VFL
Sbjct: 61 IIRTFISKPYYYLLL--GLINPLAYYLILFKAYDLLPASQAQSINYSWAITLTLMAAVFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
+++ IA + L ++++ I L +A+ + + ++
Sbjct: 119 GQKIRKQDWIACSISYLGVIVIATQGDIIGLKFDSPLGVSLALFSTLLWAGYWILNTKNT 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + AL + E++ ++ L + GL + + G R
Sbjct: 179 ADPIVTVLLGFMVALPFAWGLVIFEDENWSKISLSGWLAVTYVGLFEMGITFVLWLGALR 238
Query: 254 A--KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ + + + +P L ++ I+ +PI +++ +V+
Sbjct: 239 LTQNTARISNLIFISPFLSLILLSNIIGEPIHAATVAGLIFIIVGLVI 286
>gi|222102466|ref|YP_002539505.1| hypothetical protein Avi_7072 [Agrobacterium vitis S4]
gi|221739067|gb|ACM39800.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 304
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 83/290 (28%), Gaps = 17/290 (5%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L V ++WG + + L VL +I +R L + + +
Sbjct: 22 LAVLGVAVVWGTSYPVAKGALLYAPVLILILYRFLITTIIMMIVA--------RREIVAM 73
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + +IL + Y + T+ + + + L ++
Sbjct: 74 SRGDILRGFLLGSILFSIFLAETYGVALTSATNTALIISLCVIFTPILDYGLSRKLPPPA 133
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAI--------AVTWSAYCFARKTIPVGSSEGFFI 198
I +A++ + + I+T + A+ + + S+ I
Sbjct: 134 VIASAIVCCVGVGILTGGINAFGAGDLLVLGAAVLRAIMVVSTKRLMFGRQISSAALTAI 193
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + L V+ G F I + ++R +
Sbjct: 194 QGFSVTTLTLVVVIAQFGVGSIAVDADPQFWFAVAFLSLFCTIAAFYIQNAAVRRTTPTR 253
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
VG + T P + + +L +PI +++ +L
Sbjct: 254 VGFLMGTEPFFGFLLAHLLLAEPISATSVSGAALILAGSFAGILSENRKR 303
>gi|213155707|ref|YP_002317752.1| permease [Acinetobacter baumannii AB0057]
gi|215484915|ref|YP_002327154.1| hypothetical protein ABBFA_003278 [Acinetobacter baumannii
AB307-0294]
gi|301346520|ref|ZP_07227261.1| hypothetical protein AbauAB0_09751 [Acinetobacter baumannii AB056]
gi|301511805|ref|ZP_07237042.1| hypothetical protein AbauAB05_09505 [Acinetobacter baumannii AB058]
gi|301595539|ref|ZP_07240547.1| hypothetical protein AbauAB059_07002 [Acinetobacter baumannii
AB059]
gi|332851479|ref|ZP_08433476.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332866822|ref|ZP_08437226.1| putative membrane protein [Acinetobacter baumannii 6013113]
gi|213054867|gb|ACJ39769.1| permease [Acinetobacter baumannii AB0057]
gi|213986660|gb|ACJ56959.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332729932|gb|EGJ61263.1| putative membrane protein [Acinetobacter baumannii 6013150]
gi|332734430|gb|EGJ65550.1| putative membrane protein [Acinetobacter baumannii 6013113]
Length = 301
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 85/289 (29%), Gaps = 17/289 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
GT+ + A LWG T F + L + + +
Sbjct: 12 GTIAILVASFLWGTTGTAAAFAPTLGPLAIGAVAMGGGGLLQALIASQAIREHRQFIGRN 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +G++ LA + + S P+I+ L F ++ L+
Sbjct: 72 ISIILLGVVAVGIYPLAFYSSMHYAGITIGTV----VSIGSAPLIAAVLERFFDRKVLSK 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGS 192
++ +L ++ + ++++ +A + +
Sbjct: 128 KWFLSFVLGVVGVSLLSMGESHAAQESTNEWNKIFGIFLGLVAGATYSLYSWAAKRLIDR 187
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
M ++ ++ G + + + + +F +G+K
Sbjct: 188 GIAAKAAMGMIMGGGAVILLPTLLITGGGLLQSSTNLLVAGYMMLIPMFLGYLLFGFGLK 247
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + PL+ + ++ ++ + + + ++ I +++
Sbjct: 248 TVNASKATTLTLFEPLVAAIFAIVLVGESVSWIGWAGMFLIFICILMLS 296
>gi|167901874|ref|ZP_02489079.1| hypothetical protein BpseN_06307 [Burkholderia pseudomallei NCTC
13177]
Length = 295
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 65/217 (29%), Gaps = 8/217 (3%)
Query: 96 FSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLII 155
A + AL Q L + ++ P L + +L ERL + +A L +
Sbjct: 19 MGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERLTRAKAVALALCV 78
Query: 156 LSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNG 215
+M L +A+A+ + + ++ G V I +
Sbjct: 79 AGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLATVAVICCAAAAMLAM 138
Query: 216 FSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
+ P + + F G+ R + ++ P
Sbjct: 139 LALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFFAGLARLGAARTSMLSTLEP 198
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ + + + + + ++ ++ A++ +
Sbjct: 199 VVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAG 235
Score = 43.7 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 26/74 (35%)
Query: 232 FLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ L + ++ A+ S V ++ Y P + + + + L + + + +
Sbjct: 16 IVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERLTRAKAVALA 75
Query: 292 IVVIAMVVYLLPTV 305
+ V + +
Sbjct: 76 LCVAGSALMVGGGR 89
>gi|167844878|ref|ZP_02470386.1| hypothetical protein BpseB_06265 [Burkholderia pseudomallei B7210]
Length = 290
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/230 (11%), Positives = 68/230 (29%), Gaps = 8/230 (3%)
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ ++ A + AL Q L + ++ P L + +L ER
Sbjct: 1 RWPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGER 60
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L + +A L + +M L +A+A+ + + ++ G V
Sbjct: 61 LTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLATV 120
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTL--------FLIGYGLLNSFVFCIFSYGIKRA 254
I + + P + + F G+ R
Sbjct: 121 AVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFFAGLARL 180
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ ++ P++ + + + + + ++ ++ A++ +
Sbjct: 181 GAARTSMLSTLEPVVTVALAAALFGEMLTPLQWAGGVAILAAVLWLVRAG 230
Score = 43.7 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 27/83 (32%)
Query: 223 FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPI 282
+ + L + ++ A+ S V ++ Y P + + + + L + +
Sbjct: 2 WPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERL 61
Query: 283 DTVRTIVFGIVVIAMVVYLLPTV 305
+ + + V + +
Sbjct: 62 TRAKAVALALCVAGSALMVGGGR 84
>gi|74316901|ref|YP_314641.1| hypothetical protein Tbd_0883 [Thiobacillus denitrificans ATCC
25259]
gi|74056396|gb|AAZ96836.1| probable membrane protein [Thiobacillus denitrificans ATCC 25259]
Length = 288
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 86/274 (31%), Gaps = 8/274 (2%)
Query: 29 FVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKN 87
++ A L+ + + + Q S E++ +R + L ++ I L T+
Sbjct: 5 WMLVAAALFALMGVLVKHASQNFSAPELVFYRSAFGLLAIWAMIAVGQRRLLAPFATV-- 62
Query: 88 PKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQ 147
G V+ + F YAL + P+ L + +L+ER
Sbjct: 63 --HAGTHVWRGLSGFLALVLFFYALSRLPLATAVTLNYTAPLFLAALSAWWLRERHGRGV 120
Query: 148 IIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
A LL + ++++ ++ A G E +
Sbjct: 121 TGAVLLGFVGVVLLLRPQMDNQAWQPALAGLASGMLAAVAYVNVKRLGKLGEPEWRVVFY 180
Query: 208 LFYVVWNGFSGGEH---FFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ G + F + D +L+G G+ + + R TVG + Y
Sbjct: 181 FTLLSTVGGALWMALAGFHFPHPSDWPWLVGIGVTATLAQLALTRAYHRGHTLTVGALAY 240
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+ + V + + + + ++ A +
Sbjct: 241 STVGFSALYGVVLFGERLPPLTWAGMAVIAGAGI 274
>gi|320173038|gb|EFW48260.1| hypothetical protein SDB_04461 [Shigella dysenteriae CDC 74-1112]
Length = 301
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 86/278 (30%), Gaps = 17/278 (6%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
++W + ++ + + + + + R ++ +F ++ G+
Sbjct: 19 TLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMHPTP-------FKY 71
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L + G +AL++ + + P V ++FL ERL Q A L
Sbjct: 72 TLAIALLQTCGMVGLAQWALVSGGAGKVALLSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 153 LIILSLLIMTLHSGIPLLSLAIA---------VTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+ L ++ + S+ A SA R + + +
Sbjct: 132 IAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYTRHPRVDLLSLTSWQM 191
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
AL V L + + ++ + +K S +
Sbjct: 192 LYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLST 251
Query: 264 YTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
P+ ++ S ++L + V ++V+A+ +
Sbjct: 252 LAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVS 289
>gi|308069657|ref|YP_003871262.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Paenibacillus polymyxa E681]
gi|305858936|gb|ADM70724.1| Permease of the drug/metabolite transporter (DMT) superfamily
[Paenibacillus polymyxa E681]
Length = 276
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 77/265 (29%), Gaps = 5/265 (1%)
Query: 40 TPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSAT 99
+ L +V ++ R + + ++ + K+ V ++
Sbjct: 1 MFIKVLLLHKVGPWTIVFLRSSFGFVFIVLLMLLMRRPFKIKSIPWKSVILVALVNMVLP 60
Query: 100 ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER-----LNHLQIIAALLI 154
+ + A + + V VF G++F + + L + II L I
Sbjct: 61 WTLIGFSETRIASSMASVLNATTPIWTMLVGLVFFGAIFHRMQWLGMGLAFVGIIILLGI 120
Query: 155 ILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWN 214
+ +I G + LA +++ + S A ++
Sbjct: 121 NPASIISVDPVGFGCMLLATLCYGFGTQLSKRFLSNLSMYQATFSTLFGAAVGGGIMMAI 180
Query: 215 GFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSS 274
+ L + + +F+Y I R + Y P+ IV
Sbjct: 181 VERPDLSIVSDPGVLGSLIGLGVLGSGVAYILFNYMILRGSAEFASSVTYFVPVSAIVWG 240
Query: 275 VFILKQPIDTVRTIVFGIVVIAMVV 299
+L + I +++ + +
Sbjct: 241 FLLLNEHIGWNVLTGLVLILGGVFM 265
>gi|304314992|ref|YP_003850139.1| transporter protein [Methanothermobacter marburgensis str. Marburg]
gi|302588451|gb|ADL58826.1| predicted transporter protein [Methanothermobacter marburgensis
str. Marburg]
Length = 305
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/305 (10%), Positives = 98/305 (32%), Gaps = 18/305 (5%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFA--------I 71
+ + G L + A + +G++ + L ++ + + ++ L + +F I
Sbjct: 1 MRKVWGYLSIITATVFFGMSATLDKIMLSEMHPITIGAYTYLIAGIFLFMVRQSPLKENI 60
Query: 72 VYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVIS 131
+ ++ + + +L+ + + F+ L S + +
Sbjct: 61 LDVLNRTGGIESRITGRDYLLLLLTALLSTVIAPVLFLTGLGETTAVNASLLLNIEVLFI 120
Query: 132 VFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVT---------WSAYC 182
+ LG + +E L ++ +L+I + L +A++ +
Sbjct: 121 IILGYLIFRETLKFKDLLGIMLLIGGAAYLVSEGEFQSLFNNVALSGNLLVILAAFFWSL 180
Query: 183 FARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSF 242
+ + + + + F ++ G L L+
Sbjct: 181 DTVLSKFLSKKRDLILLSGIKSSVGGFLLLIIMLILGLSTALPTEMLPYALMVSIFSIGC 240
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
F + ++ + VG + + L + + IL +P ++ + +++ +++
Sbjct: 241 SFILIYIAVREIGAAMVGSLFPLSSLFGAIFAFLILNEPFSAMQVVSGIVMLTGVIILYW 300
Query: 303 PTVIN 307
+
Sbjct: 301 NGMKK 305
>gi|315231908|ref|YP_004072344.1| drug/metabolite transporter (DMT) permease [Thermococcus barophilus
MP]
gi|315184936|gb|ADT85121.1| drug/metabolite transporter (DMT) permease [Thermococcus barophilus
MP]
Length = 277
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 87/273 (31%), Gaps = 13/273 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + +WG T + L+ VS + +++R + + ++ +
Sbjct: 6 LVLLGITAIWGFTFPAMKVSLDYVSPILFLAYRFGIASLLMLLI----------FRNRVL 55
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ L GF I L ++F + V + F+ LK+RL
Sbjct: 56 QTDTIKEGFILGITLFFGHGFQIIGLKYTTASNSAFITSLYVVFTPFIAYFILKDRLELR 115
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIA--VTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
++ + ++ L +++ S + S + + +
Sbjct: 116 DFVSLIFAVMGLYLISGASVRFNKGDLLTVLCALSFAFQIVLVQKFKERDYLSLAFWQIF 175
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+F +V++ G + G +P L F + K K ++
Sbjct: 176 WNFMFSLVYSVIFEGIRYPSGYLPWLGILYTSVFATVIAFTLQIKYQKETKAHRAALIYS 235
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAM 297
P+ +S+ + + + + +++ A+
Sbjct: 236 AEPIFGHISAFLTMGEILSLKGYVGAALILGAI 268
>gi|171910127|ref|ZP_02925597.1| hypothetical protein VspiD_03125 [Verrucomicrobium spinosum DSM
4136]
Length = 342
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/290 (13%), Positives = 90/290 (31%), Gaps = 19/290 (6%)
Query: 34 YILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
Y++WG T L + + + R + + ++ + + G K+ +G
Sbjct: 42 YLIWGSTYLGIRLATDTMPPFLMAGSRFVLAGAFLYGVL-RWRGEAKPPTVAWKDAAIIG 100
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAAL 152
L+ V W + S + I V R +I
Sbjct: 101 GLLLLGGNGGVSWAQQYVPTGVSALIVASVPLW----IVVTDWLRPGGTRPRATVMIGLA 156
Query: 153 LIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV 212
L +++M L + I + + + T +GS ++ A+ + +
Sbjct: 157 LGFFGVVLMVLGKDSKGHPVVIPLGAAVLVLSTITWALGSIYSRHAKLPGSALMGISMQM 216
Query: 213 WNG-------------FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTV 259
G + F+ + + F + + ++ + V
Sbjct: 217 MAGGGLQLLVGTLLGELPRLRFDLISATSAWAFVYLTLIGSLVGFTAYVWLMRTCSPALV 276
Query: 260 GIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
Y PL+ + +LK+P+ G+++ A+V+ L + +
Sbjct: 277 STYAYVNPLVAVALGSLVLKEPVPHAMATAGGLILAAVVLITLTSKRRAK 326
>gi|169334357|ref|ZP_02861550.1| hypothetical protein ANASTE_00756 [Anaerofustis stercorihominis DSM
17244]
gi|169259074|gb|EDS73040.1| hypothetical protein ANASTE_00756 [Anaerofustis stercorihominis DSM
17244]
Length = 286
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/287 (11%), Positives = 90/287 (31%), Gaps = 14/287 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
G +++ A LW + + +++ + + R S +
Sbjct: 1 MEKSRKNGAIYIVIAAFLWSLNGVLIKYI-PWQPMAISGVRAFLSTITLILI-------- 51
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+ K ++F++ F+YA + P+ + L F
Sbjct: 52 ----KGAFDFKFNKHVIFASLSYVSMGILFVYATKLTTAANAIILQYTAPIFVIILSIFF 107
Query: 139 LKERLNHLQIIAALLIILSLLIMTLH-SGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
K+ Q+I + + +++ + G + I + ++ I +
Sbjct: 108 FKKFPTKKQLITVSIAFIGVVLFFMDKVGSGAMMGNILAILAGVGYSGMFIFNSYEDSSA 167
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
++ ++ +F + G L +I + FS GI+
Sbjct: 168 LDASIIGNALIFLISVPVLLQGNEAALDIAGVFGIIILGIFQMGVSYAFFSKGIETTPSV 227
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
++ +L + ++ + + I G+V+ ++V ++ +
Sbjct: 228 DASLISMLEAILNPIWVALVIGEIPSFISLIGSGLVLTSVVFNIISS 274
>gi|169797479|ref|YP_001715272.1| hypothetical protein ABAYE3515 [Acinetobacter baumannii AYE]
gi|169150406|emb|CAM88303.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter baumannii AYE]
Length = 301
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 85/289 (29%), Gaps = 17/289 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
GT+ + A LWG T F + L + + +
Sbjct: 12 GTIAILVASFLWGTTGTAAAFAPTLGPLAIGAVAMGGGGLLQALIASQAIREHRQFIGRN 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +G++ LA + + S P+I+ L F ++ L+
Sbjct: 72 ISIILLGVVAVGIYPLAFYSSMHYAGITIGTV----VSIGSAPLIAAVLERFFDRKVLSK 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGS 192
++ +L ++ + ++++ +A + +
Sbjct: 128 KWFLSFVLGVVGVSLLSMGESHAAQESTNEWNKIFGIFLGLVAGATYSLYSWAAKRLIDR 187
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
M ++ ++ G + + + + +F +G+K
Sbjct: 188 GIAAKAAMSMIMGGGAVILLPTLLITGGGLLQSSTNLLVAGYMMLIPMFLGYLLFGFGLK 247
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + PL+ + ++ ++ + + + ++ I +++
Sbjct: 248 TVNASKATTLTLFEPLVAAIFAIVLVGESVSWIGWAGMFLIFICILMLS 296
>gi|163747170|ref|ZP_02154526.1| integral membrane protein, putative [Oceanibulbus indolifex HEL-45]
gi|161379731|gb|EDQ04144.1| integral membrane protein, putative [Oceanibulbus indolifex HEL-45]
Length = 289
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 88/290 (30%), Gaps = 9/290 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
PT L++ + + + + L EV+ +R + + V
Sbjct: 2 TPTFRAALWMIGSIGSFSAMAVAGRELSARFDTFEVMLYRSVIGVIIVVTLAGATGAWRQ 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+ + F+ L + A+ F +P+ + L L
Sbjct: 62 INTRNFGTQLLRNLAHFTGQNL------WFLAVSLIPLAQVFALEFTSPLWVIVLSIFLL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIE 199
ERL + +AA+L + +LI+ L + +A A FA +
Sbjct: 116 GERLTATRALAAVLGFIGILIVARPDIGNLNTGILAAAGCAVFFALTNVLTKRLTRTQGI 175
Query: 200 MCVLAIPALFYVVWNGFSGGEHFFL--GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+L +++ S G + FL+ G + + A +
Sbjct: 176 TTILFYLTTLQLIFGLISAGYDGDIALPTADTAPFLLLVGACGLLAHFCLTNALSLAPAT 235
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
V +++ + V + + + +D I GI+ + L
Sbjct: 236 VVVPIDFVRLPAIAVVGMLLYGEVLDVWVFIGAGIIFAGNYLNLWFETRK 285
>gi|17988896|ref|NP_541529.1| transporter, DME family [Brucella melitensis bv. 1 str. 16M]
gi|260564806|ref|ZP_05835291.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265990034|ref|ZP_06102591.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17984723|gb|AAL53793.1| transporter, dme family [Brucella melitensis bv. 1 str. 16M]
gi|260152449|gb|EEW87542.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263000703|gb|EEZ13393.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 299
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 90/287 (31%), Gaps = 10/287 (3%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
S + + I G +P++ + L +V L R+ ++ +
Sbjct: 12 SSQQRWAMIALITGGIAIGSSPIFVR-LSEVGPLATGFWRLALAVLPLLLMDGRERHERK 70
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L +A G + +L + + + P+ +
Sbjct: 71 DAAPLTLADCLRLALP--GFFIAADLGAWHLSLHSTSVANATLLANMAPIFVTIGAWLLF 128
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLL-------SLAIAVTWSAYCFARKTIPVGS 192
+ R++ I+ ++++ ++++ G L +A + A
Sbjct: 129 RSRVSSSFIVGLVVVVAGVIVLKGGPGELLHSRSSGDAMALLAAVFYAGYILSVGRLRSR 188
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
I + AI A+F + F G + L ++ + +Y +
Sbjct: 189 FSTMRIMLWSSAIAAIFSLPVAYFMEGHILPATLYGWLVLAGLAWLTHAAGQSMIAYALA 248
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
S + P++ + IL +PI ++ I IV+ +++
Sbjct: 249 FLPASFSSLTLLLQPVVAAFLAWTILSEPIGLMQAIGGVIVISGILI 295
>gi|54298553|ref|YP_124922.1| hypothetical protein lpp2617 [Legionella pneumophila str. Paris]
gi|53752338|emb|CAH13770.1| hypothetical protein lpp2617 [Legionella pneumophila str. Paris]
Length = 304
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 99/289 (34%), Gaps = 12/289 (4%)
Query: 24 MMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ G LF+ A I+ GI +++++ L + VL +++ R + + +
Sbjct: 13 IQGMLFLIFAQIMVGINIVFSKYVLSSIPVLYILALRFTLAAVILLLLHWLTPAKKLPVY 72
Query: 83 DTL---KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K + + + + ++ L + P I + + L
Sbjct: 73 SYFLQLKRRDWFFIFAQALSAGVLFNFLILWGLQYTDANVAGIITSALPAIIAIMSWLIL 132
Query: 140 KERLNHLQIIAALLIILSLLIMT--------LHSGIPLLSLAIAVTWSAYCFARKTIPVG 191
E+++ + I L L+++ + +L + + +
Sbjct: 133 GEKISGKKAICVGFATLGLVVIACDKLGDINVSHSFLGDALVLTSLLPEAMYYILSKMHV 192
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+S F+ +L +++ F + D L LI GL + + + +G
Sbjct: 193 NSLPVFLISSLLNGINAILLLFCLSFSTWDSFTIHTLDWLILIILGLSSGLFYVFWYFGC 252
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + PL + + L + + + I G+V++++ VY
Sbjct: 253 QTVDGVMASLSTAVMPLATVTIAWIFLGEQLTIGQIIGMGMVILSITVY 301
>gi|330808128|ref|YP_004352590.1| membrane protein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327376236|gb|AEA67586.1| Conserved hypothetical protein; membrane protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 302
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 89/296 (30%), Gaps = 21/296 (7%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L + +WG + L+ + + + + RV + G+ + +
Sbjct: 6 ILRLLSLAAIWGASFLFMRIIAPVIGTIPTAFFRVSIAFVGLLVILALMRVDWNF----- 60
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
K ++ + F+ A ++ TP++ V +G +F E+L
Sbjct: 61 -RGKLKVVMGLGLINSGIPATFYSLAAQVLPAGYSAIFNATTPLMGVLIGGLFFSEKLTP 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLL--------------SLAIAVTWSAYCFARKTIPVG 191
++ L + + I+T + + + + + +
Sbjct: 120 AKVSGVCLGLFGVGILTRAGPVAFDLQLLMGALACLLATTCYGFAGFLTRRWLDQQGGLD 179
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
S M + L ++ S + G L + + + ++ +
Sbjct: 180 SRLSALGSMFGATVFLLPLFGYSVISQPPASWGGWSVWLSLLGLGLVCTALAYILYFRLL 239
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVIN 307
+ + P ++ +L +P+ ++ A+ + L P V+
Sbjct: 240 SSIGPVKSMTVTFLIPPFGVLWGALLLDEPLGMAHLYGGVLIAAALWLVLKPGVVK 295
>gi|323702151|ref|ZP_08113818.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
gi|323532838|gb|EGB22710.1| protein of unknown function DUF6 transmembrane [Desulfotomaculum
nigrificans DSM 574]
Length = 298
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/295 (9%), Positives = 86/295 (29%), Gaps = 13/295 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
++ + L + WG+T + Q L + I R + +
Sbjct: 2 STSQQIKADLALVAITCAWGVTFVLVQQALSGIGPYYFIGLRFTIAFGFLALIYW----- 56
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
+ + + + + L + F L + F ++ V+ ++
Sbjct: 57 ---KRLAQLDWSTIKAGLIIGSFLFGGYAFQTVGLKYTTVSNSGFITGLSVVLVPITTAL 113
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTW----SAYCFARKTIPVGSS 193
++ + + + L L +++L + + + + A
Sbjct: 114 LNRKPPGLITTLGVVSATLGLGLLSLGDNLTVNLGDVLTFFSALSYAGQIILVGKYASRH 173
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + + AL + LI + F + + +
Sbjct: 174 DPILLAILQIGVVALISMACGAVGETFPQHFTKPVRIGLLITAIPATAIAFLVQNLVQRY 233
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ I+ P+ ++ + + + + + +++ M+V L + S
Sbjct: 234 TSPTHTAIIFIMEPVFAAGTAWLLTGEMLTGRQWVGCLLILAGMLVTELKDALTS 288
>gi|37527062|ref|NP_930406.1| hypothetical protein plu3177 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786495|emb|CAE15551.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 295
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 92/282 (32%), Gaps = 13/282 (4%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+F F A ++W I + ++ + + +R + + +V + +
Sbjct: 3 IIFPFLAVLIWSINAVVSKASATAIDPAAISFYRWFLAFLTLTPFVVLSV----IRRWKT 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+L+ A + ++ YA + + P+++V + L+
Sbjct: 59 ICQYWWKLLILGALGMVLYQSLAYYAAHSISATFMGILSSLIPLLTVIISIFVLRVVPTV 118
Query: 146 LQIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
+ +L + L+ + G+ L + + +Y S
Sbjct: 119 GLALGTVLSLSGLIWLVSAGDPISLLQHGLGRGELMMLLASISYALYGVLTKHWSIPLPN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + I ++ F + L +L L + ++ G+ + +
Sbjct: 179 WQSLYVQITFGVLLLLPNFLLTKDVQLNASNISLVLFAGIPASIIAPYLWIQGVIKLGAN 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
T I P+ + ++ +L + + + I I ++ +++
Sbjct: 239 TTTIFMNLTPIFTAIIAILVLHEEMHSYHLIGGSITLLGVIL 280
Score = 38.0 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 41/132 (31%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
+ ++ +AV + + + I + L + S +
Sbjct: 1 MNIIFPFLAVLIWSINAVVSKASATAIDPAAISFYRWFLAFLTLTPFVVLSVIRRWKTIC 60
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
LI L + Y + +GI+ PLL ++ S+F+L+
Sbjct: 61 QYWWKLLILGALGMVLYQSLAYYAAHSISATFMGILSSLIPLLTVIISIFVLRVVPTVGL 120
Query: 287 TIVFGIVVIAMV 298
+ + + ++
Sbjct: 121 ALGTVLSLSGLI 132
>gi|332293335|ref|YP_004431944.1| protein of unknown function DUF6 transmembrane [Krokinobacter
diaphorus 4H-3-7-5]
gi|332171421|gb|AEE20676.1| protein of unknown function DUF6 transmembrane [Krokinobacter
diaphorus 4H-3-7-5]
Length = 310
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/309 (15%), Positives = 102/309 (33%), Gaps = 19/309 (6%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGG 77
T + L F Y+ WG T L+ + + +V + R + +F
Sbjct: 1 MKKETYLAILAFFSIYVFWGSTYLWNKIVVSEVPAFMLAGLRFTTAGLIIFLIAGLSGKS 60
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + + L+N L G F+++L + + P+ + L +
Sbjct: 61 LKISRKQLRNSILA-----GFFFLVYGNGVFVWSLKYVDSGFAALLAALQPLSILLLMRI 115
Query: 138 FLKERLNHLQIIAALLIILSLLIMTLH-----------SGIPLLSLAIAVTWSAYCFARK 186
K+ L II L ++ + ++ I + + ++ + + A+
Sbjct: 116 VQKKGLKLKSIIGVTLGLIGMYLLVSQREIAMQQGATLGIIMIFTCILSWSIGSLFVAQA 175
Query: 187 TIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCI 246
+P +M I + G + + + F
Sbjct: 176 DLPKNFFITTGYQMVSAGILLWTWSFIIGETWSSPVDWSSRAQISMVCLIIFGGIAAFTS 235
Query: 247 FSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVI 306
F+Y +K V Y P++ + + L + I T I +++ + Y + +V
Sbjct: 236 FNYLLKNVSTEKVATSAYINPVVALFLGWYFLDENITTQSIIAACVLLSGV--YFINSVR 293
Query: 307 NSGKNKTKK 315
+ K +TKK
Sbjct: 294 KNDKTQTKK 302
>gi|328947021|ref|YP_004364358.1| hypothetical protein Tresu_0092 [Treponema succinifaciens DSM 2489]
gi|328447345|gb|AEB13061.1| protein of unknown function DUF6 transmembrane [Treponema
succinifaciens DSM 2489]
Length = 308
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/313 (9%), Positives = 83/313 (26%), Gaps = 33/313 (10%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYF 74
+ S + G + +WGIT + T+ L S E++ R L + G++
Sbjct: 1 MKKISAASAFGIFLACVSVFIWGITFVSTKSLLNDFSAFEILVVRFLAAYLGLWAM---- 56
Query: 75 SGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFL 134
+ + + T + ++ F A+ S + P+ + +
Sbjct: 57 ---RPKRLVLKSKKENISFALAGLTGVTLYQFFENIAISFTTASNVSIIVSICPMFTAIV 113
Query: 135 GSVF-LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
+F ++ + + +L I + +++ + +
Sbjct: 114 ARIFLKEKCITKSFVAGFILAISGVALVSFNGNAEFHFSPKGDLLALLAGICWGFYSLFV 173
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEH------------------------FFLGNIPD 229
+ + F
Sbjct: 174 SKINSMKYDIVCSTRRIFFFALIFMIPLALSGTGAEKTSSVFINTDAAFNIKRFSSLANW 233
Query: 230 TLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
L + ++ F +++ K V Y P++ ++ + L + + +
Sbjct: 234 GNLLFLGIMASAGCFALWNKSCKILGTVKVSAGLYMIPVVTVIFAFIFLGEKLSLMGICG 293
Query: 290 FGIVVIAMVVYLL 302
+ + + +
Sbjct: 294 AAMTICGLFISSW 306
>gi|256788088|ref|ZP_05526519.1| integral membrane protein [Streptomyces lividans TK24]
gi|289771980|ref|ZP_06531358.1| integral membrane protein [Streptomyces lividans TK24]
gi|289702179|gb|EFD69608.1| integral membrane protein [Streptomyces lividans TK24]
Length = 326
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 81/284 (28%), Gaps = 9/284 (3%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
T G ++WG+ L + +++VS V+ R + + L +
Sbjct: 2 TARGWFLFSLMGVVWGVPYLMIKVAVDEVSPSGVVFARCALGAALLLPFALRKGDLLGTV 61
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ K A ++ + + T V + +E
Sbjct: 62 RRRWKPMLAFAVIEIIGPWWTLTDAERHLSSSTAGL----LIAGVPIAAVLLARFFGAEE 117
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
R+ +I L + + ++T+ + ++A + + +
Sbjct: 118 RVGARRITGLGLGLAGVAVLTVPHLTGGDARSLAEVLVTVVGYATAPLIAARHLKDVPTL 177
Query: 202 VLAIPALFYVVWNG----FSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
L P L F + + F F IK +
Sbjct: 178 QLITPCLILAAVVYAPAAFLTRPATLPSGEALAALAGLGLVCTAIAFVAFLELIKEVGPT 237
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
G++ Y P + + + +L + + + F +++ V+
Sbjct: 238 RAGVITYVNPAVAVAAGALLLDEELTLGIGVAFTLILAGSVLAT 281
>gi|217421617|ref|ZP_03453121.1| integral membrane protein [Burkholderia pseudomallei 576]
gi|217395359|gb|EEC35377.1| integral membrane protein [Burkholderia pseudomallei 576]
Length = 373
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 88/299 (29%), Gaps = 21/299 (7%)
Query: 16 KENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFS 75
+EN TL + +WG+ + L + V ++ S+ F ++
Sbjct: 60 QENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVAS-AATSIVACAFVLIVRR 118
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
++ ++ +L V F++ + + +++TP +
Sbjct: 119 KSIATVRRHW-------LLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAIYA 171
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTL--------HSGIPLLSLAIAVTWSAYCFARKT 187
L+ERL A L + ++M S + A A
Sbjct: 172 HFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVV 231
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIP-----DTLFLIGYGLLNSF 242
EM + A + + E L ++G G+ +
Sbjct: 232 KASRELPRMKPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAA 291
Query: 243 VFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ +G+ R + I+ ++ +++ + +V+A ++
Sbjct: 292 NNMLVQHGLARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSS 350
>gi|187927498|ref|YP_001897985.1| hypothetical protein Rpic_0395 [Ralstonia pickettii 12J]
gi|309779800|ref|ZP_07674555.1| membrane protein [Ralstonia sp. 5_7_47FAA]
gi|187724388|gb|ACD25553.1| protein of unknown function DUF6 transmembrane [Ralstonia pickettii
12J]
gi|308921377|gb|EFP67019.1| membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 301
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 83/290 (28%), Gaps = 18/290 (6%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG + + V + R + V ++ LS+
Sbjct: 17 IGLMVVLCMCWGFQQVAIKVAAHDVGPVMQAGVRSAIASVLVLAFALWRGTCLSV----- 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
++ G L+ FI T + F Y ++ L E L
Sbjct: 72 RDGTLAGGLMAGVLFGVEFLCIFIGLSYTTASRMAVFLYTAPIFTALGLHFFVPGEHLRP 131
Query: 146 LQIIAALLIILSLLIMTLHS------------GIPLLSLAIAVTWSAYCFARKTIPVGSS 193
Q + +++ G L +A A+ + R + +
Sbjct: 132 RQWAGIGIAFAGIVLAFADGVLHPAAGPSTSLGDALGVVAGALWGATTIVVRASKLSEAP 191
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + L ++ G L L+ + + + ++R
Sbjct: 192 AAKTLLYQLAVSAVLLLLMAAGTGQAFTANLTPTALASLAYQSVLIAFASYLTWFWLLRR 251
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
S + + + PL + V +L +P+ + +V+ +++ L
Sbjct: 252 YLASRLSVFSFLTPLFGVAFGVLLLHEPVGLRFALAAALVLSGILLVNLR 301
>gi|163940191|ref|YP_001645075.1| hypothetical protein BcerKBAB4_2227 [Bacillus weihenstephanensis
KBAB4]
gi|163862388|gb|ABY43447.1| protein of unknown function DUF6 transmembrane [Bacillus
weihenstephanensis KBAB4]
Length = 296
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 95/289 (32%), Gaps = 10/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
++ +F + ++ + + +R+L++ + +++ + S
Sbjct: 2 KSPILSYFILFFGVFALSTSAIFVK-IADAPAAITAFYRLLFATVILLPFLIFNTNNRSE 60
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L+ K G+L S LA H+ + +L ++ + P+ S+ G K
Sbjct: 61 LRSLSKKQWGFGLL--SGLFLAAHYVLWFESLQYTSIASSTVIVTLQPLFSMVGGYFLFK 118
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSS 193
ER II L+ I +++ + IA F
Sbjct: 119 ERFTKGAIIGCLIAISGSIVIGWQDFQISGEALYGDILAFIAAGVITAYFFISQHVRKDL 178
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + +LF ++ F F+ + IF++ +K
Sbjct: 179 SLIPYSVISYSSSSLFLGIFAYTQQSPFFNYTAQTWWSFIGLAFIATILGQTIFNWLLKW 238
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + + + + FIL + I + + ++ I + +LL
Sbjct: 239 MSATVISMSILGETIGTCILAYFILDETISLQQGLGILLIFIGLASFLL 287
>gi|330752203|emb|CBL87161.1| protein containing DUF6 [uncultured Sphingobacteria bacterium]
gi|330752245|emb|CBL87202.1| membrane protein containing DUF6 [uncultured Sphingobacteria
bacterium]
gi|330752253|emb|CBL87209.1| protein containing DUF6 [uncultured Sphingobacteria bacterium]
gi|330752292|emb|CBL87247.1| protein containing DUF6 [uncultured Sphingobacteria bacterium]
Length = 296
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 91/300 (30%), Gaps = 20/300 (6%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVS---VLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ L + +++G + + I RV+ F
Sbjct: 2 RLKAHLALLSVALIYGANYTIAKNVLDQDYLKPNGFILLRVISGFVLFTILHALF----- 56
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
+K+ + + + +A++ FF L S VTP+I + L S++L
Sbjct: 57 -IKEKVDRKDFGLLAICGLFGIAINQLFFFKGLGATSPVHASLIMVVTPIIVLILSSIYL 115
Query: 140 KERLNHLQIIAALLIILSLLIMTL-----------HSGIPLLSLAIAVTWSAYCFARKTI 188
ER+ +++ ++ ++ +++ G + + FA+ +
Sbjct: 116 TERIRWWKVLGIIVGMIGAMLLITKGSSGNNSMSSSLGDLYILINATSYALYLVFAKNLM 175
Query: 189 PVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFS 248
+ + + SG + F + + +
Sbjct: 176 KKYHPFTVMKWIFSFGLIVVIPFGIGDLSGVVWRSFPIDIWVAIIYVLVFTTFFAYLLNA 235
Query: 249 YGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
Y + +T Y PL+ ++ + +V+ + ++ I + + L +
Sbjct: 236 YALSTVNPTTASAYIYMQPLIASTIAILWYNDSLSSVKVLSGALIFIGVYMISLQKRKRN 295
>gi|322833066|ref|YP_004213093.1| hypothetical protein Rahaq_2358 [Rahnella sp. Y9602]
gi|321168267|gb|ADW73966.1| protein of unknown function DUF6 transmembrane [Rahnella sp. Y9602]
Length = 308
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 78/297 (26%), Gaps = 9/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
M G L V A +LWG T F VS L + + + +
Sbjct: 6 RERMTGVLAVVFASVLWGSTGTAATFAPDVSPLAIGAVAMGLGGLLQALISARRIVTSRV 65
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
G L + LA + + + + ++ +I +L L
Sbjct: 66 TLVNNARMLFTGALAVAVYPLAFYASMHLAGVTVGTVISLGSAPLLSALIEYYLDGQRLT 125
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVG 191
R I ++L + + IA A +
Sbjct: 126 RRWMTGAAIGVAGMVLLCVGESGSHSTAGQGDHAIAGVVLGLIAGLTYALYAWAARHLMQ 185
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
M ++ + G + + + F Y +
Sbjct: 186 RGVPSRAAMGATFGLGGLLLMPVLWMTGAPLLASWNNAAVGAYMALIPMFVGYVCFGYAL 245
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
R S + P + V +V I+ + + + G+VV ++ +P +
Sbjct: 246 ARIPASMATTITLLEPAVAAVLAVVIVGERLPPLGWTGIGLVVACLIFITVPLKRRA 302
>gi|299738369|ref|XP_001838315.2| integral membrane protein DUF6 [Coprinopsis cinerea okayama7#130]
gi|298403276|gb|EAU83503.2| integral membrane protein DUF6 [Coprinopsis cinerea okayama7#130]
Length = 361
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 94/306 (30%), Gaps = 29/306 (9%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSV----LEVISHRVLWSLPGVFFAIVYFSGGLSLL 81
G L V + + + L + L + E+I R++ + +V+ +L
Sbjct: 36 GLLLVAASELFFACMHLAVKILNSIDPPVSTFELIFVRMVITYVFSVAYMVWTGVSNPVL 95
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
P +L ++ Y+L + F++P+ + G++FL E
Sbjct: 96 GP----PGVRWLLFCRGIGGSIGLYGIYYSLQYLSLSDATVLTFLSPMCTAIAGAMFLGE 151
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------------------IAVTWSA 180
L Q++A + + ++++ + S I V +
Sbjct: 152 HLRVSQLVAGVFSLGGVVLIARPPWLFGDSSQHNVGDEDVTPAQRLTAVGVALIGVLGAT 211
Query: 181 YCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLN 240
F + + +F V + E L+ G+
Sbjct: 212 LAFTSLRAIGKRAHTMHSMVSFAGQSIIFSGVAMLVTRTEFIIPAKTSWLAMLLMIGVFG 271
Query: 241 SFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
+ + G++R + YT + + LK + + I+V++ +
Sbjct: 272 FIAQILLTMGLQRETAGRGTMAVYTQIVFATILQRIFLKTTPPLLSIVGTVIIVVSALYT 331
Query: 301 LLPTVI 306
L V
Sbjct: 332 ALSKVK 337
>gi|254720450|ref|ZP_05182261.1| hypothetical protein Bru83_13186 [Brucella sp. 83/13]
Length = 270
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 74/265 (27%), Gaps = 5/265 (1%)
Query: 48 EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGF 107
S + + R V + G + +F +LA
Sbjct: 3 SHYSPIFITMIRYWVFAAFVVLLALRSGGIAKAAATK-----RPLLQIFRGLLLATEIVT 57
Query: 108 FIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGI 167
FI+ L + + P++ L FL E++ + A + + +L++
Sbjct: 58 FIFGLSRAGMAMAQSIFQGAPLLVTMLSVPFLGEKVGWRRWTAIITGLCGVLLIINPINA 117
Query: 168 PLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNI 227
+ + + FA + + M + VV G H
Sbjct: 118 HFDANMLFPVAATTMFAVYVVATRAVSKSDSAMTSFFYTGIGGVVVLTIVGMFHITPIAP 177
Query: 228 PDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
D ++ + + V + Y ++ + I + +
Sbjct: 178 YDWPWMAALCVCGIASHYFLIRAYDILEAGEVQPLTYFQLVIGAFIATLIFHEKLTWNIV 237
Query: 288 IVFGIVVIAMVVYLLPTVINSGKNK 312
IVV A + +L + ++K
Sbjct: 238 AGAFIVVGAGLFAMLRERWLALEHK 262
>gi|229173112|ref|ZP_04300663.1| Transporter, Drug/metabolite exporter [Bacillus cereus MM3]
gi|228610445|gb|EEK67716.1| Transporter, Drug/metabolite exporter [Bacillus cereus MM3]
Length = 295
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 88/280 (31%), Gaps = 10/280 (3%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+F + ++ + L + +R+ ++ + +++ + LK +
Sbjct: 11 LFFGVFALSTSAIFVK-LADAPAAIIAFYRLFFAALILLPLLLFNKNNRNELKTVTRR-- 67
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
G S LA H+ + +L ++ + P+ S+ G KER +I
Sbjct: 68 QWGFGFISGLFLAAHYVLWFESLQYTSVASSTVIVTLQPLFSMIGGYFLFKERFTKGAVI 127
Query: 150 AALLIILSLLIMTLHSG-------IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCV 202
L+ I +++ + IA F +
Sbjct: 128 GCLIAISGSIVIGWQDFQISGEALYGDILAFIAAGIITAYFFISQHVRKDLSLIPYSVIS 187
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
A F ++ F+ + IF++ +K + + +
Sbjct: 188 YGSSACFLGIFAYMQQESFIHYSTQTWLCFISLAFIATILGQTIFNWLLKWMSATVISMS 247
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLL 302
+ + + FIL + I + + ++ I + ++L+
Sbjct: 248 ILGETIGTCILAYFILNETISLQQGLGITVIFIGLALFLV 287
>gi|193076122|gb|ABO10729.2| Permease (DMT) superfamily [Acinetobacter baumannii ATCC 17978]
Length = 301
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 86/289 (29%), Gaps = 17/289 (5%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
GT+ + A LWG T F + L + + +
Sbjct: 12 GTIAILVASFLWGTTGTAAAFAPTLGPLAIGAVAMGGGGLLQALIASQAIREHRQFIGRN 71
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +G++ LA + + S P+I+ L F ++ L+
Sbjct: 72 ISIILLGVVAVGIYPLAFYSSMHYAGITIGTV----VSIGSAPLIAAVLERFFDRKVLSK 127
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA-------------IAVTWSAYCFARKTIPVGS 192
++ +L ++ + ++++ +A + +
Sbjct: 128 TWFLSFVLGVVGVSLLSMGESHTAQESTNEWNKIFGIFLGLVAGATYSLYSWAAKRLIDR 187
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
M ++ ++ G + + + + +F +G+K
Sbjct: 188 GIAAKAAMGMIMGGGAVILLPTLLITGGGLLQSSTNLLVAGYMMLIPMFLGYLLFGFGLK 247
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
S + PL+ + ++ ++ + + + + ++ I +++
Sbjct: 248 TVNASKATTLTLFEPLVAAIFAIVLVGESVSWIGWVGMFLIFICILMLS 296
>gi|166711387|ref|ZP_02242594.1| hypothetical protein Xoryp_07960 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 315
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/285 (10%), Positives = 74/285 (25%), Gaps = 9/285 (3%)
Query: 32 CAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAV 91
+LWGIT + + + + L ++ R+L + + + G + + +
Sbjct: 15 FCVLLWGITAILGKLIT-LQALPLVWWRMLIVVVALALWPRVWRGLRGVSWRVVLGYCGI 73
Query: 92 GMLVFSAT-ILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIA 150
G LV ++ L V + +
Sbjct: 74 GALVALHWLTFYGAIKLANASVAATCIALAPVCTAVIEPWVTKRRFRPRELLFGLAVLPG 133
Query: 151 ALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFY 210
L++ + + A+ V R +E+ +
Sbjct: 134 VALVVGGVPEGMRAGVVVGAISAVFVGLFGSLNKRMVAHADPLTVTALELGAGTLILTLL 193
Query: 211 VVWNGFSGGEHF-----FLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYT 265
L L F + ++ +V ++
Sbjct: 194 APAMPLLLPALHGDLLVVPSLHDGVLLLALSLACTLLPFTLALVALRHLSAYSVQLVTNL 253
Query: 266 APLLMIVSSVFILKQP--IDTVRTIVFGIVVIAMVVYLLPTVINS 308
P+ IV ++ +L + + + I++ A+ ++ +
Sbjct: 254 EPVYAIVLAIVLLGEQRELTLQFYLGVAIILGAVFLHPVLERRRK 298
>gi|148974019|ref|ZP_01811552.1| Permease of the drug/metabolite transporter (DMT) superfamily
protein [Vibrionales bacterium SWAT-3]
gi|145965716|gb|EDK30964.1| Permease of the drug/metabolite transporter (DMT) superfamily
protein [Vibrionales bacterium SWAT-3]
Length = 297
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/287 (11%), Positives = 84/287 (29%), Gaps = 13/287 (4%)
Query: 27 TLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L F +WG + + + + +R ++ + + + + +
Sbjct: 3 YLLPFFTVCIWGANAIVNKLAASTIEPSAMSFYRWFIAMLILTPFCIRSV----IKQWPI 58
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + ++ YA LT + + P+ISVFL L + ++
Sbjct: 59 IKPNLSKLAFLGFLGMVLNQSLGYYAGLTTSASNMALITSLVPLISVFLSVPLLNKSISS 118
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSL--------AIAVTWSAYCFARKTIPVGSSEGFF 197
L I+ +L + L +M + + Y +
Sbjct: 119 LSIVGGVLSLSGLALMLGKGDPLFFIHQELTQGDGYMLIAACVYASYCVLLKRWKMPISN 178
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+ + ++ + E L + ++ I
Sbjct: 179 WVVIYMQGIFAVAMLAPLWLTSEQLVPSQQAIPLIAYAAVAASILAPWMWVKAIDTIGAD 238
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
+ + P++ IV + L + I+ I +VV +++ +
Sbjct: 239 SSAMFMNLMPVVAIVLASTWLGEEINQFHIIGGIMVVSGVILAQVKR 285
Score = 36.4 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 40/138 (28%)
Query: 167 IPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGN 226
+ L V + + E + I L + S + + +
Sbjct: 1 MHYLLPFFTVCIWGANAIVNKLAASTIEPSAMSFYRWFIAMLILTPFCIRSVIKQWPIIK 60
Query: 227 IPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVR 286
+ L + Y S + ++ PL+ + SV +L + I ++
Sbjct: 61 PNLSKLAFLGFLGMVLNQSLGYYAGLTTSASNMALITSLVPLISVFLSVPLLNKSISSLS 120
Query: 287 TIVFGIVVIAMVVYLLPT 304
+ + + + + L
Sbjct: 121 IVGGVLSLSGLALMLGKG 138
>gi|126207577|ref|YP_001052802.1| hypothetical protein APL_0089 [Actinobacillus pleuropneumoniae L20]
gi|126096369|gb|ABN73197.1| putative membrane protein [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 272
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/269 (9%), Positives = 75/269 (27%), Gaps = 3/269 (1%)
Query: 30 VFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
+ I +G + ++ ++ ++ RV+ +L + ++ L L +
Sbjct: 1 MHFTAIFFGASGIFGALIKS-RPDTLVLGRVMIALVCISLYFIWKKQALVKLTRRELFSQ 59
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ ++ +A + + + SF FV + L ++
Sbjct: 60 ILSGVLLAAHWITFFTAVQVGGVALATLGFASFPAFVA--LFEMLFFREKLSYREGFLLV 117
Query: 150 AALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALF 209
A + ++ + L L V + + + +
Sbjct: 118 AITIGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAVVNRKTMSKLSGTQTSWWQYLVA 177
Query: 210 YVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLL 269
++ FS + + + +F + T ++ P+
Sbjct: 178 MLILLPFSTTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASMIISLEPVY 237
Query: 270 MIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
I + + I I+++++
Sbjct: 238 AIAIAWLCFNEVPTLTMLIGGAIILLSVA 266
>gi|146307068|ref|YP_001187533.1| hypothetical protein Pmen_2040 [Pseudomonas mendocina ymp]
gi|145575269|gb|ABP84801.1| protein of unknown function DUF6, transmembrane [Pseudomonas
mendocina ymp]
Length = 308
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/305 (13%), Positives = 96/305 (31%), Gaps = 10/305 (3%)
Query: 17 ENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
G+L + A ++ G + +V++V+ R L +
Sbjct: 9 RTVDNKLKRGSLEMIAAMLISGTIGWFV-LASGQAVVDVVFWRCLIGGAALLLVCAVLG- 66
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
LL+ L + + + V S + +W + +++ Y V P + V L +
Sbjct: 67 ---LLRAELLGRRVLLLAVLSGVAIVGNWLLLFASYAQASIAVSTVVYNVQPFMLVGLAA 123
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPL-----LSLAIAVTWSAYCFARKTIPVG 191
+FL ER+ L++ L + +L + G L IA+ A +
Sbjct: 124 LFLGERITWLKLGWLALAFIGMLAIVGAHGRGAVAGGNYLLGIALALGAALLYAVAALIV 183
Query: 192 SSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGI 251
+ I L V+ G G + + ++ + I
Sbjct: 184 KRLSATPPHLIALIQLLTGVLMLAPLAGHQLPQGEAAWASLMTLGVVHTGLMYMLLYGAI 243
Query: 252 KRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
++ + G + + P+ I+ + ++ + +++A
Sbjct: 244 QKLPTALTGALSFIYPVAAILVDWLAFDHWLSPLQWLGVAAILLAAAGMQQGWRFGLRAR 303
Query: 312 KTKKS 316
T ++
Sbjct: 304 PTVRA 308
>gi|39933595|ref|NP_945871.1| DMT family permease [Rhodopseudomonas palustris CGA009]
gi|39647441|emb|CAE25962.1| Permeases of the drug/metabolite transporter (DMT) superfamily
[Rhodopseudomonas palustris CGA009]
Length = 307
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/289 (9%), Positives = 67/289 (23%), Gaps = 17/289 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG + + L + + R +L + L TL
Sbjct: 10 IALMLLCCLSWGFNQIAVKLVLPDIPPFLQAAIRSAGALIVILIIATSRRVKLFQRDGTL 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +F+ + + + + L + P L ERL
Sbjct: 70 R------AGLFAGVLFGLEFVLIYHGLTLTTASRAVVFLYTAPFFVALGSYRLLGERLRR 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF-------- 197
+Q L + + + + +
Sbjct: 124 MQWAGLALSFAGVALAIGVPQADVDASVLLGDLLLVGGGALWAATTLIVKGTRLQRAPAE 183
Query: 198 --IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V + + L + F ++ +K
Sbjct: 184 KGLAYQVAISVPILTGAALLSGETITKMPSTLSLGLMAYQTIWVVGLTFLLWFGLVKTYS 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S + + PL + + I+ P+ +V+ + + P
Sbjct: 244 ASKLSAFTFITPLFGVAAGYLIMHDPLTPAFGAAAVLVIAGLYLVNRPA 292
>gi|320528304|ref|ZP_08029466.1| integral membrane protein DUF6 [Solobacterium moorei F0204]
gi|320131218|gb|EFW23786.1| integral membrane protein DUF6 [Solobacterium moorei F0204]
Length = 289
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 89/271 (32%), Gaps = 2/271 (0%)
Query: 23 TMMGTLFVFCAYILWGITPLYTQFLEQVS--VLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+ G +++ A +++G TPL F + + R + +P ++ IV L L
Sbjct: 2 KIKGIIYILLAALIYGFTPLLCAFTYPLGNNGFSMTFFRSFFVIPILYLIIVLKKIDLHL 61
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
++ LK ++ + L ++ + ++ + S+ FV + +F
Sbjct: 62 DRNELKALLPACIMGACLSTLFLYTSYKYISIGSATTLHFSYPVFVLMISFIFFKEPIKF 121
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
+ + + + + + L ++A + ++ + A + + +
Sbjct: 122 ANIFVIAVAVIGISCFMKISDGIDIKGVLYAIASGIAYAFFMVALDKNNLSYMNRYKLSF 181
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
+ I + +N I L + F F GIK +
Sbjct: 182 YIAVISVFVLLSFNIVLKQLVLIQTLHSYFYMFIVAILTSIFGIIFFKEGIKLIGATNAS 241
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
I PL I+ S L I ++
Sbjct: 242 IFSLFEPLSSIIVSYIFLGIKISILQMFGCF 272
>gi|293390545|ref|ZP_06634879.1| GTPase ObgE [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951079|gb|EFE01198.1| GTPase ObgE [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 310
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/310 (14%), Positives = 96/310 (30%), Gaps = 13/310 (4%)
Query: 19 ASLPTMMGTLFVFCAYILWGITPLYTQFLEQV-SVLEVISHRVLWSLPGVFFAIVYFSGG 77
+ G L A +WG P+ Q + V ++ +R + S G+F +
Sbjct: 1 MQQQPLAGFLLALTAVCMWGALPIALQQIVAVMDAQTIVWYRFITSAIGLFILLGLRKKL 60
Query: 78 LSL--LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLT--SFSYFVTPVISVF 133
L+ +G+L SA + + Q SF V
Sbjct: 61 PKPTALRQRYLLLIMLGILGLSANFFLFNLALNYIPPTSSQVLSPLSSFIMLFVGVFVFK 120
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS 193
++ + I+ +L L + IA+ S+ A
Sbjct: 121 EHIGLHQKIGLVILILGLVLFFNQRFSDFLQLNDYFKGIVIALCASSCWVAYGMAQKLML 180
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
F + +L I +++ F+ + N LI L + + + R
Sbjct: 181 SRFSSQQILLMIYIGCTIIFTPFANIQQVSALNSFQLGCLIFCCLNTIIAYGTYGEALNR 240
Query: 254 AKLSTVGIMEYTAPLLMIVSS--------VFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+S V + P+ I+ + + Q ++ + + VV ++ +L
Sbjct: 241 WDVSKVSAIMTQIPIFTIIFTEILIAVYPQLFVNQELNWISYLGAIAVVSGSLLSVLGHK 300
Query: 306 INSGKNKTKK 315
+ + ++ +
Sbjct: 301 LPAIFHRKNR 310
>gi|228908409|ref|ZP_04072252.1| Uncharacterized transporter [Bacillus thuringiensis IBL 200]
gi|228851200|gb|EEM96011.1| Uncharacterized transporter [Bacillus thuringiensis IBL 200]
Length = 304
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 79/263 (30%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+ + L SVFL E++ I
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIISVTPIFTAILTSVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + +++ G + + +A + F +T + + +
Sbjct: 129 GGVMSFAGIALISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ + + + +Y I A S
Sbjct: 189 LSSTVCMLIFLPGVYQNILAAPLEVNLSVIYLGVFPTVLPYIALAYIISHAGASEATSSL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPITACFIAWIWLGEVPTLVS 271
>gi|229173333|ref|ZP_04300877.1| Uncharacterized transporter [Bacillus cereus MM3]
gi|228610027|gb|EEK67305.1| Uncharacterized transporter [Bacillus cereus MM3]
Length = 314
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/260 (12%), Positives = 78/260 (30%), Gaps = 13/260 (5%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 25 AFTILIWGTAFPAIRMGLESYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 81
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A + Y T S VTP+++ SVFL +++ I
Sbjct: 82 ---IFIFGALGFTFYHIALNYGEKTVNAGSASLIVSVTPIVTAIFASVFLNKKMKLNGWI 138
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
++ + + ++ G + + +A + F +T + + +
Sbjct: 139 GGVISFIGIAFISFSQGDAIQLNSGGLFILLAAISESLFFVFQTSYLKKYGFLPFTIYTI 198
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ +++ E + + + +Y I + +
Sbjct: 199 LSSTVCMLIFLPGVYTEILAAPLEVNMSVIYLGLFPTVLPYIALAYIISHSGAAEATSSL 258
Query: 264 YTAPLLMIVSSVFILKQPID 283
Y P+ + L +
Sbjct: 259 YLTPVTACFVAWIWLGEVPS 278
>gi|291326340|ref|ZP_06124147.2| RhaT protein [Providencia rettgeri DSM 1131]
gi|291314640|gb|EFE55093.1| RhaT protein [Providencia rettgeri DSM 1131]
Length = 329
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 88/283 (31%), Gaps = 3/283 (1%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
F+ I+ ++++ ++ + + + R L++ + A +
Sbjct: 42 SQRKAEFFLVLTTIIAAWGWVFSRESVQGMPIFAFLGSRFLFAAIIL--APFCRGKKNRI 99
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
L G + +L +H ++ ++ FV V V L + ++
Sbjct: 100 TAKQLPKILMTGGWMSLNMVLWIHAVAITDSIGEGAFIMSLAMLFVPLVAWVILKNKPVR 159
Query: 141 ERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEM 200
L + L L+L L L A A F ++ + +
Sbjct: 160 YFWEALPVAVLGLACLTLFKAQLEFKASQLWFLGAAIVQAIYFCYTSLYTRTIPLLPLTT 219
Query: 201 CVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVG 260
LA + +V + F + F+ + S F + G K
Sbjct: 220 IQLACTGMTGLVLSFFLEEWPSSITVPTMMWFIASVVIATSLRFVLQLIGQKNTTAGNAA 279
Query: 261 IMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
I+ P++ + + + + V+ + +++ A+ Y
Sbjct: 280 IIMILEPVMTVFVAAIWYNERMPFVQIVGCVLILSALFYYRWR 322
>gi|146295824|ref|YP_001179595.1| hypothetical protein Csac_0785 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409400|gb|ABP66404.1| protein of unknown function DUF6, transmembrane
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 303
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/291 (8%), Positives = 82/291 (28%), Gaps = 6/291 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV--YFSGGLSLL 81
G L++ I + + + L V+ ++ R + + + + L
Sbjct: 3 KGILYLMITLIFFSSYEVVGKTLAGMVNPYQLNFIRFFFGGLILLPIAIKNLQGKKIKLS 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTS---FSYFVTPVISVFLGSVF 138
K + +G++ ++ + G I + + S ++ +
Sbjct: 63 KRDIFFLALIGIVNVVISMSCLQLGINITKKASLAAVIFSSNPLFVALSAHFILNERLNI 122
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
K + I +++ LI+ +L L ++ S +
Sbjct: 123 RKIIGMIIGIGGIVIVFYKDLIIGKDFIKGILLLILSAITYGVYTTMGKKFTQRSSSIIM 182
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++F + F + + + + G+
Sbjct: 183 NSFSFLFGSIFLLPIILLKRFSLFSMPLKAIFPMFYLTFFVTGIAYYTYFLGLTYTSAGA 242
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
++ + P+L + + L + I + ++++ + + +
Sbjct: 243 GSMIFFLKPILASIFASIFLSEKISINLILGTLVILLGIGIVQFADKKSLK 293
>gi|145632774|ref|ZP_01788507.1| hypothetical protein CGSHi3655_08716 [Haemophilus influenzae 3655]
gi|145634968|ref|ZP_01790675.1| hypothetical protein CGSHiAA_08063 [Haemophilus influenzae PittAA]
gi|145636167|ref|ZP_01791837.1| hypothetical protein CGSHiHH_09470 [Haemophilus influenzae PittHH]
gi|148825997|ref|YP_001290750.1| hypothetical protein CGSHiEE_04870 [Haemophilus influenzae PittEE]
gi|148826957|ref|YP_001291710.1| hypothetical protein CGSHiGG_01155 [Haemophilus influenzae PittGG]
gi|229846688|ref|ZP_04466795.1| hypothetical protein CGSHi7P49H1_01653 [Haemophilus influenzae
7P49H1]
gi|144986430|gb|EDJ92996.1| hypothetical protein CGSHi3655_08716 [Haemophilus influenzae 3655]
gi|145267834|gb|EDK07831.1| hypothetical protein CGSHiAA_08063 [Haemophilus influenzae PittAA]
gi|145270689|gb|EDK10622.1| hypothetical protein CGSHiHH_09470 [Haemophilus influenzae PittHH]
gi|148716157|gb|ABQ98367.1| hypothetical protein CGSHiEE_04870 [Haemophilus influenzae PittEE]
gi|148718199|gb|ABQ99326.1| hypothetical protein CGSHiGG_01155 [Haemophilus influenzae PittGG]
gi|229810177|gb|EEP45896.1| hypothetical protein CGSHi7P49H1_01653 [Haemophilus influenzae
7P49H1]
Length = 287
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 82/288 (28%), Gaps = 7/288 (2%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIV 72
+ + F+ AY + ++ + Q + E + R L L + ++
Sbjct: 1 MQSHSIPSLYHKAISFMVSAYFSITLMNVFVKTASQTIPASETLFSRFLIGLLFLLPFVI 60
Query: 73 YFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISV 132
K + K + + + + + + L I +
Sbjct: 61 ----KDRDFKVDTRQWKFLILRNAAGVSNMLINFYVVKFLPLSIAV--LLMNTSALFIPI 114
Query: 133 FLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
L K LN L + +S++++T H+G + A I +
Sbjct: 115 LLLFFHQKTPLNVLLCSLIGFLGVSIILLTNHNGNVDPIYVLIGLSGAVLAGMAFIGLQE 174
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ ++ L + + N+ + L+ G + + K
Sbjct: 175 LNKYNTPKNIVFYFHLIGTFMLPVFFINQWKIPNLYELGLLLLVGGFGLIFQLLLTRAFK 234
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
A + + +T + V + + I+V A+ +
Sbjct: 235 YAPANIITPFAFTGVVFSSVFDWLFWHHTPNLYFWLGAVIIVGAVSLL 282
>gi|327395149|dbj|BAK12571.1| probable amino acid metabolite efflux pump EamA [Pantoea ananatis
AJ13355]
Length = 395
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 22/272 (8%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
L +WG+ + L + + + R S F I
Sbjct: 105 LLLAILVTAIWGVNFSVIKLGLHTIDPFTLAAIRFTLSALPALFFI-----------KKP 153
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
P + + + + + S + + ++ LGS+ +ERL+
Sbjct: 154 DVPWRYLIGYGLIFGIGLWGLVNLGIKTGLSAGIASLALQFSAFFTLLLGSLIFRERLSR 213
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAI 205
QI ++ LL + + + + + + + G L
Sbjct: 214 YQITGFVIACAGLLSIVFVTDGSVTLSGMLLVMAGALAWSVANIIIKKAGTKQVFAFLVW 273
Query: 206 PAL----------FYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + V + + N L F + I++ +K+
Sbjct: 274 SSAFSPLPLFGLDWLVNGSSGFTEMFSHMDNRALLSVLFQVYPNTLFGYWIWNSLLKQYP 333
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRT 287
+STV + P+ I+ S+ I + + +
Sbjct: 334 VSTVAPLSLLVPVFGILGSMMIFGEHLSPQKM 365
>gi|315226653|ref|ZP_07868441.1| DMT superfamily drug/metabolite transporter [Parascardovia
denticolens DSM 10105]
gi|315120785|gb|EFT83917.1| DMT superfamily drug/metabolite transporter [Parascardovia
denticolens DSM 10105]
Length = 383
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/338 (10%), Positives = 98/338 (28%), Gaps = 36/338 (10%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLY-TQFLEQVSVLEVISHRVLWSLPGVFFAIV 72
++++N L T G++ + A WG ++ Q + +S + R + + V
Sbjct: 1 MNRKN-ELRTFEGSVALVVAAACWGFAFVFSVQGSQTMSFWFFNATRFTLASVSLLPFAV 59
Query: 73 Y-FSGGLSLLKDTLKNPKAVG--------------------------MLVFSATILAVHW 105
+ F ++ V V +
Sbjct: 60 WSFIKNHKIVIPDENRRMRVNSGAFRVPVISLSDLQRKGSFLYRVLIYCVCGVLLFVAST 119
Query: 106 GFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHS 165
+ +++Q F + + L +FL +R + +I L+ I+ +++ +
Sbjct: 120 IQQLGLEVSKQAAHAGFISSLYIIAVPILARIFLHKRTSLFTMIGILVAIIGFYFLSIPA 179
Query: 166 GIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSG 218
G + + T V + + + A+ + F G
Sbjct: 180 GAGFSRMDPVDLIFLASATLFGAHIVVLDANVHHVDSMMLSFVQSLVVAILSWIGAAFDG 239
Query: 219 GEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFIL 278
+ + + + +G + + + I+ L V + IL
Sbjct: 240 SINMTAATHGWISIAYTGIVSVGVAYTLQIFGQRFVQPAQASILMSLESLFSAVGGILIL 299
Query: 279 KQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ + ++ + ++ +P + +S
Sbjct: 300 HEFMSGRAIFGSSLIFVGTLLSQIPVENLRLRRNRLES 337
>gi|311106046|ref|YP_003978899.1| hypothetical protein AXYL_02864 [Achromobacter xylosoxidans A8]
gi|310760735|gb|ADP16184.1| hypothetical protein AXYL_02864 [Achromobacter xylosoxidans A8]
Length = 301
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 93/289 (32%), Gaps = 11/289 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSL 80
+G + A L G ++ S V+ R ++ +F L
Sbjct: 4 SSERVGLAQMAAAMTLSGTLGVFV-LESGQSAWNVVFFRCVFGALSLFLYCWA----RGL 58
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
LK L + + + + + L ++W A L + Y V P + LG +FL
Sbjct: 59 LKPGLFTVRTLALALAAGAALVLNWVLLFSAYRLASISLATAVYNVQPFFLIGLGVLFLG 118
Query: 141 ERLNHLQIIAALLIILSLLIMT------LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
ER ++ ++L L+++ LS + +A + I V +
Sbjct: 119 ERPTRGKLAWSVLAFAGLMLVLRLSEAGGADSRAYLSGLMLGLGAAALYGVTAIIVKRLK 178
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
++ L L V+ + + + + ++ + I++
Sbjct: 179 HIPPQVLALVQVTLGAVMLLPMADFNALPAAPLQWGYLVALGLIHTCLMYILMYSAIQKL 238
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
++ + + P + I+ +D + ++ +A L
Sbjct: 239 PTTSTAALSFIYPAVAILLDFVAYGHRMDATQIAGVAMIFVAAAGVSLN 287
>gi|229161557|ref|ZP_04289537.1| Uncharacterized transporter [Bacillus cereus R309803]
gi|228621802|gb|EEK78648.1| Uncharacterized transporter [Bacillus cereus R309803]
Length = 303
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 86/263 (32%), Gaps = 13/263 (4%)
Query: 31 FCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPK 89
++WG + LE + + R+L + + + L LKD
Sbjct: 15 AFTILIWGTAFPAIRIGLEAYTPEHLTLLRLLIASFILLLFSFIYKLRLPDLKDIPA--- 71
Query: 90 AVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQII 149
+ +F A ++ Y T S VTP+++ L SVFL E++ I
Sbjct: 72 ---IFIFGALGFTIYHIALNYGEKTVNAGSASLIVSVTPIVTAILASVFLNEKMKLNGWI 128
Query: 150 AALLIILSLLIMTLHSGIPLL------SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVL 203
+++ + + +++L G + + +A + F + + F + +
Sbjct: 129 GSVISFVGIALISLSQGDSIQLNSGGLFILLAAVSESLFFVFQKSYLTKYGFFPFTVYTI 188
Query: 204 AIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIME 263
+ ++++ + + + + +Y I R + I
Sbjct: 189 FSSTVCMLIFSPGIYQKILAAPLEVNVSVIYLGLFPTVLPYIALAYIISRTGAAEATISL 248
Query: 264 YTAPLLMIVSSVFILKQPIDTVR 286
Y P+ + L + V
Sbjct: 249 YLTPVTACFIAWVWLGEVPTIVS 271
Score = 41.4 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 30/102 (29%)
Query: 203 LAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIM 262
L + +++ + I L + +YG K + ++
Sbjct: 43 LRLLIASFILLLFSFIYKLRLPDLKDIPAIFIFGALGFTIYHIALNYGEKTVNAGSASLI 102
Query: 263 EYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
P++ + + L + + I I + + + L
Sbjct: 103 VSVTPIVTAILASVFLNEKMKLNGWIGSVISFVGIALISLSQ 144
>gi|227810133|ref|ZP_03989046.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904713|gb|EEH90631.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 280
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/284 (9%), Positives = 82/284 (28%), Gaps = 13/284 (4%)
Query: 34 YILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGM 93
+++ L + + + + R +
Sbjct: 1 MLVFATVGLIVRHI-PLPESVIAFCRAFLGAFSSLSLPAQKGEAAREKLWEHRYKLFSC- 58
Query: 94 LVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALL 153
+ W F A + Y++ P+ +F E+L ++++ L
Sbjct: 59 ----GFAMGFTWIFLFKAFASTTVAAAVICYYMAPIFVLFFSPFSFGEQLTKGKVLSVLF 114
Query: 154 IILSLLIMTLHSGIP-------LLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
+++++ G ++ +A + G + + V+
Sbjct: 115 AFCGMILVSGIFGESSGANAEGMIYGLLAAFFYVCVMMINKTLGGLTPYESTLVEVILAA 174
Query: 207 ALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTA 266
+ H L L + F + +F + + + + + + Y
Sbjct: 175 LILLPYVFWTEDVSHLVLTGSEWGYLLFLSLFVIGFTYALFFSALPKLEAAAIALYTYID 234
Query: 267 PLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGK 310
P++ ++ S F+L + + ++++ V + + N K
Sbjct: 235 PIVAVLLSTFLLHERFTPGMFLGAVLILLPTAVQEIRSFHNKVK 278
>gi|160876644|ref|YP_001555960.1| hypothetical protein Sbal195_3538 [Shewanella baltica OS195]
gi|160862166|gb|ABX50700.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS195]
gi|315268843|gb|ADT95696.1| protein of unknown function DUF6 transmembrane [Shewanella baltica
OS678]
Length = 308
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/300 (13%), Positives = 96/300 (32%), Gaps = 10/300 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++ A LW + L + L+++ VL S+ + + +
Sbjct: 2 KSSNLAYVYGMAAVFLWSTVATAFKIALSYYTPLQLVFVAVLTSIIALGGILAWQKKLSL 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L + L+ P + +++ A + V+ L + L
Sbjct: 62 LKQQFLRRPAFYLVT--GLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
K+ L I AAL+ + I+ I S +A+T + +
Sbjct: 120 KQHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGLALTSTLLWCLYWIVNTKDQ 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L ++ + F ++ +K
Sbjct: 180 GDPVVSLLLSFLIGLPFIAVTLVLTDTLPSFSLKAIFAGVYVGLFEMGITFVLWLMALKT 239
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A + + + M + +P++ I +IL++ I + ++ M++ L K+K
Sbjct: 240 ATRTANISTMVFLSPVMSIGFIAWILQETIAMATYLGLAFILSGMMLQQLWPRYTERKSK 299
>gi|71279547|ref|YP_270885.1| membrane protein [Colwellia psychrerythraea 34H]
gi|71145287|gb|AAZ25760.1| membrane protein [Colwellia psychrerythraea 34H]
Length = 291
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 91/296 (30%), Gaps = 16/296 (5%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ--VSVLEVISHRVLWSLPGVFFAIVYFS 75
M ++ + + + + + + + VLE+++ R + S + I
Sbjct: 4 TIKNSVPMSVWYMLISALGFALMAACVKEVSGLGIPVLEIVAARAIVSGIISYADI---- 59
Query: 76 GGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLG 135
K +L+ T+ + F YA+ T + ++ PV + L
Sbjct: 60 ----KRKKISLWGHNKALLIARGTVGSFALMFVYYAVTTLPLAEATVLQYLHPVFTAVLA 115
Query: 136 SVFLKERLNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIP 189
FLKE + I + +L L I+ + A A+ A +
Sbjct: 116 VFFLKETIQRSTIACIAISLLGLFIIIQPNLQLDNAIHYPWISIGAAVMGAFGSAVAYVI 175
Query: 190 VGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSY 249
+ ++ L + + G F + ++ T L+ G+ +
Sbjct: 176 IKKLTKTDDSSVIIFYFPLVALPISVVMLGSDFVVPSLAATGLLVLVGIFTQVGQVGLTK 235
Query: 250 GIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
+ A + Y L + + + G +++ ++ +L
Sbjct: 236 ALHSADANKATAYAYVQVLFSVFIGWAYFSEVPMATTIMGGGFIMVGALINVLWKR 291
>gi|18309318|ref|NP_561252.1| hypothetical protein CPE0336 [Clostridium perfringens str. 13]
gi|18143994|dbj|BAB80042.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 310
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 80/279 (28%), Gaps = 8/279 (2%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFL--EQVSVLEVISHRVLWSLPGVFFAIVYF-SGG 77
G V A + WGI + ++ L +S + + R S F I+
Sbjct: 2 NNKQKGISLVLIATVFWGIMGISSRILYEAGLSTMFIAFSRSFLSSICFFIWIMITDRKI 61
Query: 78 LSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSV 137
L + L G+ F+ + + + + + S +VT +F G
Sbjct: 62 LKIDPRGLAISALYGIGTFALCFIGYNLSVEYIPISVATVLMFTNSIWVTIFGVLFFGEK 121
Query: 138 FLKER-----LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
F ++ L + I + L M+ L + +
Sbjct: 122 FNMKKGSVILLTLVGCIMVSNMSLGHFNMSAIGIAAGLGTGFLFAFQIIFPKFFSGYRKD 181
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ + + LF F + + L L + +
Sbjct: 182 TLLIYGYIFASIFIGLFTDFKESFDIIANTPNIGMVILNILSIGILSTFISNTFYIKSTE 241
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFG 291
+ S I+ P+L + + FI + ++ + +
Sbjct: 242 YIEASVTSILASMEPVLSSIFAFFIFGEVLNGKQIVGAI 280
>gi|330827938|ref|YP_004390890.1| transporter [Aeromonas veronii B565]
gi|328803074|gb|AEB48273.1| Transporter [Aeromonas veronii B565]
Length = 299
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 77/290 (26%), Gaps = 3/290 (1%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + A +WG+ + + ++ + R L + + + +
Sbjct: 5 LMLLMAATIWGMGFVAQRLGMDHMGPYTFNGLRFLLGALSLLPLLWWLKSRQPVAVAGDH 64
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ +G ++ + + L T + ++ V + K LN
Sbjct: 65 SQLLIGGVLAGLVLFCAASLQQVGLLYTTAAKAGFITGLYIILVPVLGLLLRHKSGLNTW 124
Query: 147 QIIAALLIILSLLIMT--LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLA 204
L L +L +T G L + + A +
Sbjct: 125 IGALIALTGLYVLSVTDEFTIGFGDLLQVVGALFWAVHLLLVDHYSNRVAPIKLAGVQFV 184
Query: 205 IPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEY 264
+ L + L + + + G + A + I+
Sbjct: 185 VCGLLSLATAFVIETPTVAGAVAGWQALLYAGLVSVGVGYTLQVVGQRGAHPAHAAIILS 244
Query: 265 TAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTK 314
+ V V +L + +D +++ M++ + + K
Sbjct: 245 LETVFAAVGGVLLLGETLDERAIAGCALMLAGMLISQIRLRWWWKSRRDK 294
>gi|302379838|ref|ZP_07268321.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3]
gi|302312316|gb|EFK94314.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3]
Length = 303
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 89/284 (31%), Gaps = 20/284 (7%)
Query: 28 LFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
L + ILWG + + + +++ R ++L + +I+++ D LK
Sbjct: 12 LALLIVAILWGSSLTVVKQSSKTFNPNFILAIR--FTLAAILLSIIFWKRLRQAKFDDLK 69
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+ + L + + + + F VI FLG + K+R +
Sbjct: 70 SGLLI------GIFLFMAYSSQTLGVKFADPGRSGFLSASYCVIVPFLGWIVFKQRPDRY 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSS-----------EG 195
+ AA L I + ++L + +A +
Sbjct: 124 NLSAAALCITGIFFISLSGSSAHVDNPLAWLGDLLALLSGLLFASHIIAVSALAKGRDPI 183
Query: 196 FFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ + L ++ H + + L + + + + G K
Sbjct: 184 VMTILQFIMAAVLSWITTIVIEDNSHIVVTSRSVMELLYLAVMCTAVALLLQNIGQKYTN 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
ST I+ + I+ V I + + I F + A++V
Sbjct: 244 PSTAAIILGFESIFGILIPVLIGIESLTVFSVIGFVFIFAAILV 287
>gi|293602705|ref|ZP_06685146.1| EamA family efflux transporter [Achromobacter piechaudii ATCC
43553]
gi|292818896|gb|EFF77936.1| EamA family efflux transporter [Achromobacter piechaudii ATCC
43553]
Length = 301
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/311 (8%), Positives = 77/311 (24%), Gaps = 29/311 (9%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + + ++WG+ + + + +S + + + R + + +
Sbjct: 2 STTHLSRKDYFCALAVVVIWGLNFVVMKVGMRGLSPMMLGALRFALAAFPLILFV----- 56
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
+ P L F + S ++ L +
Sbjct: 57 ------RRPQLPWHWIAAYGLVQGLGQFGLLFTALKFGMPAGMASLVIQTQAFFTLLLAA 110
Query: 137 VFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF 196
L ER I + L L ++ G + + A
Sbjct: 111 PVLGERARRHHWIGLGVAALGLAVIAGGRGEGPGQMTMLGFALTLGGAFMWAASNMIVRL 170
Query: 197 FIEMCVLAIPALFYVV-----------------WNGFSGGEHFFLGNIPDTLFLIGYGLL 239
P F G +G L L
Sbjct: 171 ASRKAPGYDPFAFIAWSSAAPVLPFLLLAVLIDGWEPVVGMVTGIGWGEALSVLYLAVLA 230
Query: 240 NSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ +++ + R + + P++ + ++ + + ++ + G V+ +++
Sbjct: 231 TLVAYTLWTRLLTRHPAARIAPFSLLVPVVGLWAASMAFGERLQPLQWVGAGCVLAGLII 290
Query: 300 YLLPTVINSGK 310
+ +
Sbjct: 291 NQVGGRWLRNR 301
>gi|253999998|ref|YP_003052061.1| hypothetical protein Msip34_2292 [Methylovorus sp. SIP3-4]
gi|253986677|gb|ACT51534.1| protein of unknown function DUF6 transmembrane [Methylovorus sp.
SIP3-4]
Length = 295
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 95/286 (33%), Gaps = 16/286 (5%)
Query: 27 TLFVFCAYILWGITP-LYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
V A I WG L + ++ + + R L + + + L
Sbjct: 7 YFCVLFAAIQWGANFNLAIPVVAEMPPVVAGATRYLLAALIMLTLTYIRGEHVPL----- 61
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
A +V + F + + + + P+++ + + ERL+
Sbjct: 62 --RHARAYIVLGLVGVFGFNLLFFLGMQSTSAVNGALIMALNPLLTALIAWATIGERLHM 119
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLA-------IAVTWSAYCFARKTIPVGSSEGFFI 198
Q +A + +L + I+ L +G L +++W+AY K + + G
Sbjct: 120 RQWLAFPIGLLGVAIVVLGAGAHLEISHGDILIFLASLSWAAYNVCVKKMMPTDTSGIAS 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
++ + AL + SG + G LI + ++ GI+R
Sbjct: 180 TAAIMTVGALALTLVALLSGEQFVMPGQHAAIALLIMTIGGGVLAYLCWNAGIRRLGAGR 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
I P+ +V + P T++ +V+ A+ P
Sbjct: 240 AAIFLNLVPVTSMVIAAME-GVPPTTIQLTGAALVIGAVSFASWPR 284
>gi|227327261|ref|ZP_03831285.1| hypothetical protein PcarcW_08053 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 323
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/287 (11%), Positives = 89/287 (31%), Gaps = 5/287 (1%)
Query: 18 NASLPTMMGTLFVFCAYILWGITPLYTQFLEQ-VSVLEVISHRVLWSLPGVFFAIVYFSG 76
+ + LF A ++W I + + + + +R L + + ++
Sbjct: 25 SVMRKPTLNALFPTIAVLIWSINVIVNKLSASVIDPAAISFYRWLLAFLVMTPFMLPTLR 84
Query: 77 GLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGS 136
++ V L+ ++ + G + S +T ++S+ L
Sbjct: 85 QHAVAIRQHVWKLLVLGLLGMVLYQSLAYYAAHTISAVMMGIMGSLVPLLTVLLSIPLLR 144
Query: 137 VFLKERLNHLQIIAALLIIL----SLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+ + +++ + I+ L GI + +Y S
Sbjct: 145 LAPTLGVVLGSLLSLVGIVWLIGEGHPEQILAQGIGPGEFMMFCASLSYALYGVLTKRWS 204
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
+ I V+ F ++ L L + + + ++ G+
Sbjct: 205 IPLPNWVSLYVQIAFGVVVLIPNFLLTDNVQLNANNLPLVIFAGIMASILAPFLWIQGVM 264
Query: 253 RAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
R S I P+ + ++ L +P+ + GI ++ +++
Sbjct: 265 RLGASKASIFMNLTPIFTAMIAIGFLHEPLHHYHLVGGGITLLGVIL 311
>gi|192288949|ref|YP_001989554.1| hypothetical protein Rpal_0519 [Rhodopseudomonas palustris TIE-1]
gi|192282698|gb|ACE99078.1| protein of unknown function DUF6 transmembrane [Rhodopseudomonas
palustris TIE-1]
Length = 307
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/289 (9%), Positives = 67/289 (23%), Gaps = 17/289 (5%)
Query: 27 TLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + WG + + L + + R +L + L TL
Sbjct: 10 IALMLLCCLSWGFNQIAVKLVLPDIPPFLQAAIRSAGALIVILIIATSRRVKLFQRDGTL 69
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ +F+ + + + + L + P L ERL
Sbjct: 70 R------AGLFAGVLFGLEFVLIYHGLTLTTASRAVVFLYTAPFFVALGSYRLLGERLRR 123
Query: 146 LQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF-------- 197
+Q L + + + + +
Sbjct: 124 MQWAGLALSFAGVALAIGVPQADVDASVLLGDLLLVGGGALWAATTLIVKGTRLQRAPAE 183
Query: 198 --IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ V + + L + F ++ +K
Sbjct: 184 KGLAYQVAISVPILTGAALLSGETITKMPSTLSIGLMAYQTIWVVGLTFLLWFGLVKTYS 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPT 304
S + + PL + + I+ P+ +V+ + + P
Sbjct: 244 ASKLSAFTFITPLFGVAAGYLIMHDPLTPAFGAAAVLVIAGLYLVNRPA 292
>gi|163795206|ref|ZP_02189174.1| hypothetical protein BAL199_06044 [alpha proteobacterium BAL199]
gi|159179604|gb|EDP64133.1| hypothetical protein BAL199_06044 [alpha proteobacterium BAL199]
Length = 297
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 85/285 (29%), Gaps = 16/285 (5%)
Query: 27 TLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
+ + + W + + + +VS L + + R + GV ++ F+ +
Sbjct: 10 YVLLTLTMLSWAGNAVAGRIAVGEVSPLTLTTLRWI----GVAILVLLFARRQIAKDWPV 65
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
M A V F A T PV + + + ++
Sbjct: 66 LRQHLPFMAALGALGFTVFNALFYMAAQTTVAINLGIIQGSIPVFVMMGAYLVYRTPVSL 125
Query: 146 LQIIAALLIILSLLIMTLHSGI-----------PLLSLAIAVTWSAYCFARKTIPVGSSE 194
+Q + I+ + I+ LH I LL + ++ Y A + P S
Sbjct: 126 VQAAGVAITIIGVAIVALHGDIAQLATLEFADGDLLMVGACALYAGYTVALRRRPAVSGL 185
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
F + + A+ ++ + G + + L + F +
Sbjct: 186 AMFSVLAMAAMVTSLPLMAIEAAMGTLIWPSATGWAVLLYVVLFPSFLAQIFFLRAVDLV 245
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
G+ P+ VF+L + + V+ + +
Sbjct: 246 GPGRAGLFVNLVPIFAATLGVFVLDEQFQGFHAVALAFVLGGIWL 290
>gi|167645863|ref|YP_001683526.1| hypothetical protein Caul_1899 [Caulobacter sp. K31]
gi|167348293|gb|ABZ71028.1| protein of unknown function DUF6 transmembrane [Caulobacter sp.
K31]
Length = 324
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 107/291 (36%), Gaps = 8/291 (2%)
Query: 22 PTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEV-ISHRVLWSLPGVFFAIVYFSGGLSL 80
P G +++ + + + + L + +R SL ++ +
Sbjct: 10 PNTQGAIWLLLSALTFVSMTTLVKHLSGDYPSHLQNFYRQTGSLIVAIPFMIRSPRQVLF 69
Query: 81 LKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLK 140
+ + L + + + +Y + F P+ V L ++FL+
Sbjct: 70 VP-----RSTMPALFLRSLLATIGMILLLYTYEAMPMAEANALSFTRPLWVVLLATLFLR 124
Query: 141 ERLNHLQIIAALLIILSLLIMT--LHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
E + +I A ++ + ++I+ +GI + +A SA C A V S
Sbjct: 125 EAIGPSRIAAVVIGFVGVVIIMRPWSAGIAVGWPHLAALISALCLAGTITGVKSLTRDLS 184
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+L ++ + + + ++ D + L GLL++ +F G+ + +
Sbjct: 185 ASSILVWSSIMGELLSLPFALADWRWPSVGDLIPLFLIGLLSAANQVLFIKGMAVGEAAV 244
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSG 309
+ ++Y +L +++ + + D + G++V++ + + + +
Sbjct: 245 LAPIDYARLVLSVIAGALVFNEWPDVFTYVGAGVIVVSTLYITIREIQSKR 295
>gi|113969300|ref|YP_733093.1| hypothetical protein Shewmr4_0956 [Shewanella sp. MR-4]
gi|113883984|gb|ABI38036.1| protein of unknown function DUF6, transmembrane [Shewanella sp.
MR-4]
Length = 306
Score = 64.2 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 10/302 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + ++ A LW + L S L+++ VL S+ + + +
Sbjct: 2 KSSNLAYVYGMAAVFLWSTVATAFKIALGFYSPLQLVFVAVLTSIVALGAILAWQKKLPL 61
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
L L+ P + +++ A + V+ L + L
Sbjct: 62 LKAQLLRRPAFYLVT--GLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLL 119
Query: 140 KERLNHLQIIAALLIILSLLIMTLHSGIPLLSLA------IAVTWSAYCFARKTIPVGSS 193
K+ L +IAAL+ + I+ + +A+T + +
Sbjct: 120 KQHLRKSDMIAALIAYSGVFIIATGGDVSGFRFDSPLGIGLALTSTLLWCLYWIVNTKDQ 179
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
+ + + + L ++ + F ++ +K
Sbjct: 180 GDPVVSLLLSFLIGLPFITVTLLLTDTLPSFSLSAVMAGMYVGLFEMGITFVLWLMALKT 239
Query: 254 A-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNK 312
A + + + + + +P++ I +IL++ I I G ++ M++ L K K
Sbjct: 240 ATRTANISTLVFLSPVMSIGFIAWILQETIAAATYIGLGFILSGMMLQQLFPRYLERKTK 299
Query: 313 TK 314
Sbjct: 300 LN 301
>gi|269215805|ref|ZP_06159659.1| putative integral membrane protein DUF6 [Slackia exigua ATCC
700122]
gi|269130755|gb|EEZ61831.1| putative integral membrane protein DUF6 [Slackia exigua ATCC
700122]
Length = 400
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/345 (8%), Positives = 85/345 (24%), Gaps = 53/345 (15%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLE--------------VISHRVLWSLP 65
+ GT+ + + G+ PL ++ +V + + + R+ +
Sbjct: 39 QMNRKWGTIAMLLSATGMGLVPLLSRAATRVDFFDGTAGLNAGDSVGAFMATGRMTMGIV 98
Query: 66 GVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYF 125
++ K K + ++ + ++ + L +
Sbjct: 99 FFVILMLATRKT-----GVFKKLKLTPAIALGGLMIGLSLACYVTSTLMTSVANAVLFIY 153
Query: 126 VTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFAR 185
PV V L +F KE ++ LQ I + + +L G + +
Sbjct: 154 TGPVFCVILARIFRKEPMHALQWICLAAVFVGMLFAEGLMGFGDGGFRVDFSLEMSTAEF 213
Query: 186 KTIPVGSSEGFFIEMCVLAIPALFYVV--------------------------------- 212
+G G + A
Sbjct: 214 PQKGLGDIFGLLSGVFYGASMFFNGYRKDADTTARGVWNFIFAAVGAGTLTLVMNFLGTS 273
Query: 213 -WNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMI 271
+ L ++ + + + + + + Y + +
Sbjct: 274 GITAPTWALGLNLTTANWISAVVFWIVCGPVALGLLLAAGRNLPAADYSTIAYWEVPVAL 333
Query: 272 VSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ I + I ++V + + + + K + +
Sbjct: 334 FIGLVIFGEAFTVNTIIGTILIVGGGAIPAVKGMTAARKQSKESA 378
>gi|258624913|ref|ZP_05719840.1| putative permease [Vibrio mimicus VM603]
gi|258582769|gb|EEW07591.1| putative permease [Vibrio mimicus VM603]
Length = 288
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/268 (8%), Positives = 80/268 (29%), Gaps = 11/268 (4%)
Query: 45 QFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVH 104
Q ++++ I R + + + + + + + A
Sbjct: 28 QAIQELPPFGFIGLRFIAASLCLLPFCLGALK-------QASRQACLQSMGVGLLLAASL 80
Query: 105 WGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLH 164
+ + ++ +F ++ + L +R ++ + ++ L ++ +
Sbjct: 81 FCWIHAISISDTLGEGAFIMSLSMLFVPLLAWPIFGQRPIRAFWLSLPVAVIGLFLLAWN 140
Query: 165 SGIPLL----SLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGE 220
A A F + + L + + +
Sbjct: 141 GTWQFAANQLWFLAASCCLAMHFNFNSRFSSQLPPMLLTTLQLFTAGCLGIALSWLTESW 200
Query: 221 HFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQ 280
+ + F + L S + + + G K A + ++ P+ +V SV I +
Sbjct: 201 PSTISPVTWKWFALSVLLATSLRYLMQTMGQKSANPTNAALLMLLEPVWTLVLSVLIYDE 260
Query: 281 PIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + ++ ++++Y + +
Sbjct: 261 TMPFNKMLGCAFLLASLLLYRVSLLRLR 288
>gi|229524983|ref|ZP_04414388.1| permease [Vibrio cholerae bv. albensis VL426]
gi|229338564|gb|EEO03581.1| permease [Vibrio cholerae bv. albensis VL426]
Length = 303
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/297 (9%), Positives = 81/297 (27%), Gaps = 11/297 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + +LW + L +++ L++++ + S +
Sbjct: 1 MNEKRALGLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMGKLKL 60
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
++ L NP +L ++ A + + + ++FL
Sbjct: 61 IVPTLLANPFYYLLL--GLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL 118
Query: 140 KERLNHLQIIAALLIILSLLIMT-------LHSGIPLLSLAIAVTWSAYCFARKTIPVGS 192
+R+ IA L ++++ L PL ++ +
Sbjct: 119 GQRIRKQDWIACALSYFGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNK 178
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIK 252
++ + + F + + F ++ +K
Sbjct: 179 ADPIVGVLLGFLLAIPFALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALK 238
Query: 253 RA-KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+ + + + +P + + I+ + I +++ +VV
Sbjct: 239 NTQNTARISNLIFASPFISLFLLATIIGEAIHPTTLFGLVLIIAGLVVQQWQGRKAQ 295
>gi|218675323|ref|ZP_03524992.1| putative permease protein [Rhizobium etli GR56]
Length = 322
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 89/276 (32%), Gaps = 15/276 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
M G + +++ + + +V R ++L + + Y +
Sbjct: 1 MRGIALKVSSVVVFLAMQTCIKLAGPDIPPGQVTFCRSFFALFPIMAYLAYIGQLRAAF- 59
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + TI + F Y LL + P+++V +VFL E
Sbjct: 60 ----HTANPVGHLKRGTIGILSMAFGFYGLLHLPLPEAIALGYALPLVAVIFAAVFLGET 115
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLA---------IAVTWSAYCFARKTIPVGSS 193
+ + A L+ + + I++ + V +SA I V
Sbjct: 116 VRIYRWSAVLVGMAGVAIISWPKLTLFRDGGMETEQAVGALCVLFSAVLGGMAMIQVRRL 175
Query: 194 EGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKR 253
++ +L V++ S + + P L+LI G + + +
Sbjct: 176 VEEEKTATIVLYFSLTASVFSLASLPFGWLVLPWPSALYLIAAGFCGGVAQILLTESYRH 235
Query: 254 AKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIV 289
A +ST+ EYT+ LL + F+ +
Sbjct: 236 ADVSTIAPFEYTSILLGGIVGYFVFGDVPSITMLVG 271
Score = 38.4 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 22/64 (34%)
Query: 246 IFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTV 305
YG+ L + Y PL+ ++ + L + + R + + + + P +
Sbjct: 80 FGFYGLLHLPLPEAIALGYALPLVAVIFAAVFLGETVRIYRWSAVLVGMAGVAIISWPKL 139
Query: 306 INSG 309
Sbjct: 140 TLFR 143
>gi|254458625|ref|ZP_05072049.1| integral membrane protein [Campylobacterales bacterium GD 1]
gi|207084391|gb|EDZ61679.1| integral membrane protein [Campylobacterales bacterium GD 1]
Length = 301
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/290 (15%), Positives = 95/290 (32%), Gaps = 23/290 (7%)
Query: 26 GTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDT 84
G ++ A ++ I + + +S LEV+ R ++ + + +A+
Sbjct: 16 GVKYMLMASFMFAIMGAFAKLASEHMSSLEVVFFRNVFGVVLIGYAVY--------KNPM 67
Query: 85 LKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLN 144
+L+F + + Y + P+ + +FLKE+L+
Sbjct: 68 THKGGKPFLLLFRGVMGFTALLAYFYNIANIPLGDAVTFSKTAPIFTAIFAWLFLKEKLS 127
Query: 145 HLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGF-------- 196
+A + +L++ S I I +S A V +
Sbjct: 128 ASAWLAVFVGFGGILLIAQPSAIGFTKYDILGIFSGIGAALAYTSVRELRNYYDTRAIVL 187
Query: 197 ------FIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYG 250
I L I + + + F + + L++IG GLL + +
Sbjct: 188 SFTLVGTIGPIFLFILSEYIQMPELDFMLGEFVMPSGVVWLYVIGLGLLGTLSQYYMTKA 247
Query: 251 IKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVY 300
K VG + YT + I+ +F+ ++VIA ++
Sbjct: 248 YGETKAGIVGAVSYTNIVFAILVGLFLGDSLPSMTTASGIILIVIAGIMV 297
>gi|198428550|ref|XP_002124070.1| PREDICTED: similar to CG5281 CG5281-PA [Ciona intestinalis]
Length = 344
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 100/284 (35%), Gaps = 13/284 (4%)
Query: 26 GTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTL 85
G L A I + ++ L +F++ V V+EV+ R + F + D +
Sbjct: 38 GILCCILASIFYLLSALVVKFVKSVGVMEVVLARCWVQ--FMLMLPYVFYNWTNKGVDFI 95
Query: 86 KNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNH 145
+ K + + A F +LL F++ S LG +FL ER +
Sbjct: 96 GDLKTLVLFWMRAFTGLCATFLFYQSLLYLPLGDAITLAFLSVTFSQLLGCLFLHERSSL 155
Query: 146 LQIIAALLIILSLLIM-----------TLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSE 194
L + ++ II ++++ T S + + + I S+
Sbjct: 156 LDYLLSVFIICGVVLIAKPPFLFNQSETYSSDKLIGIILVVAHSFLAAGMYILIRKLSTS 215
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
VV F L D +FL+ GLL + + G+
Sbjct: 216 SHGSLNVFYYGFVGLIVVPIFSKTMGVFQLPCSSDLIFLLLVGLLGGLGQVLLTIGLVYE 275
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMV 298
+T +++ + V + +L +P+ + +V+I+++
Sbjct: 276 TAATFAMLDSFQIVFGFVFQIVVLDEPLSYLSLGGAFLVLISIM 319
Score = 38.0 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 10/136 (7%), Positives = 35/136 (25%), Gaps = 1/136 (0%)
Query: 166 GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPALFYVV-WNGFSGGEHFFL 224
G +L +A + + L + ++ F+
Sbjct: 36 GFGILCCILASIFYLLSALVVKFVKSVGVMEVVLARCWVQFMLMLPYVFYNWTNKGVDFI 95
Query: 225 GNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDT 284
G++ + +F + L + + + + L +
Sbjct: 96 GDLKTLVLFWMRAFTGLCATFLFYQSLLYLPLGDAITLAFLSVTFSQLLGCLFLHERSSL 155
Query: 285 VRTIVFGIVVIAMVVY 300
+ ++ ++ +V+
Sbjct: 156 LDYLLSVFIICGVVLI 171
>gi|195952745|ref|YP_002121035.1| protein of unknown function DUF6 transmembrane [Hydrogenobaculum
sp. Y04AAS1]
gi|195932357|gb|ACG57057.1| protein of unknown function DUF6 transmembrane [Hydrogenobaculum
sp. Y04AAS1]
Length = 293
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/294 (14%), Positives = 102/294 (34%), Gaps = 16/294 (5%)
Query: 24 MMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLK 82
+ +WG + + + + L R ++ +F + + L +
Sbjct: 7 KKAFFLLIVLSFIWGYNWVLMKQAISYMPELYFAFFRTIFGAFLLFGILAFNKKSLKIT- 65
Query: 83 DTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKER 142
+ + GF I AL + T+ + P V LKE
Sbjct: 66 ------HFKYVSILGLLQTTGFVGFTILALKFAKAGKTAILVYSMPFWLVLFSWKILKET 119
Query: 143 LNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAV--------TWSAYCFARKTIPVGSSE 194
+ +II+ ++ L L ++ + + +W+ +K +++
Sbjct: 120 PDRKEIISNIVAFLGLFLVLEPWNMLGNKGFLGDALAVLSGISWAFAVIWQKRHHNLNAD 179
Query: 195 GFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRA 254
+ + I ++ ++ + L N+ + I+SY IKR
Sbjct: 180 IVSLNAWQMLIGSIGILICALMFERFYMKFSYFLLFAIFYNAVLANALAWVIWSYAIKRL 239
Query: 255 KLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINS 308
+G+ T P++ ++SS+ ILK+ +D + +++ +++ L + +
Sbjct: 240 PSGFMGLTMLTTPVIGMISSMIILKERMDFYEIVGSSFILLGLLINTLDHIRKA 293
>gi|77463053|ref|YP_352557.1| RhaT family protein [Rhodobacter sphaeroides 2.4.1]
gi|221638911|ref|YP_002525173.1| RhaT family, DMT superfamily transporter [Rhodobacter sphaeroides
KD131]
gi|77387471|gb|ABA78656.1| Possible transporter, RhaT family, DMT superfamily [Rhodobacter
sphaeroides 2.4.1]
gi|221159692|gb|ACM00672.1| transporter, RhaT family, DMT superfamily [Rhodobacter sphaeroides
KD131]
Length = 294
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/299 (10%), Positives = 91/299 (30%), Gaps = 10/299 (3%)
Query: 21 LPTMMGTLFVFCAYILWGITPLYTQFLE-QVSVLEVISHRVLWSLPGVFFAIVYFSGGLS 79
+ + G + + + + + ++ + + +++ L++ P +
Sbjct: 1 MENLRGIVMMVVSMAGFAMEDMFVKLAAANMPTGQILMLLGLFAAPLFWALA------RR 54
Query: 80 LLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFL 139
K L G +++ V F+ AL Q S P++ F ++FL
Sbjct: 55 EGKAVLSREALAGPILWRNGGEMVGTAGFVTALTLGQLSSVSAILQAAPLVVTFGAALFL 114
Query: 140 KERLNHLQIIAALLIILSLLIMTLHS--GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFF 197
ER+ + A + + ++++ G SL + + +
Sbjct: 115 GERVGWRRWSAIAVGFVGVIVVIRPGLDGFDTASLWAVLGVAGLAIRDLATRRVAPSTST 174
Query: 198 IEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLS 257
+++ A + + + G L+G + + + +S
Sbjct: 175 MQVGAWAFLTVAVLGAMMLAVGGGATWPTPGQAALLLGAVSFSFVGYWTLILATRVGDVS 234
Query: 258 TVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y+ + ++ + + D +++ +Y + + +
Sbjct: 235 AIVPFRYSRLVFAMLIGFLVFHERPDGWMLAGAALII-GSGLYSFMREQRLRRLSMRAA 292
>gi|323484674|ref|ZP_08090036.1| hypothetical protein HMPREF9474_01787 [Clostridium symbiosum
WAL-14163]
gi|323402057|gb|EGA94393.1| hypothetical protein HMPREF9474_01787 [Clostridium symbiosum
WAL-14163]
Length = 293
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/280 (10%), Positives = 82/280 (29%), Gaps = 10/280 (3%)
Query: 29 FVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNP 88
+ + ++ + ++ L +R+ +++ + + L
Sbjct: 11 MIATGVVGISLSAIIVKY-SDAPSLITAVYRLFFTVAMMTPVVFLNRSFRMELSRVSLRT 69
Query: 89 KAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI 148
+ S LA+H+ + +L ++ + L+ RL +
Sbjct: 70 VV--LCAVSGIFLALHFVSWFESLAYTSVASSTVIVCTESIWVALGFCFLLRGRLKKKAV 127
Query: 149 IAALLIILSLLIMT---LHSGIPLLSLAIAVTWSAYCFARK----TIPVGSSEGFFIEMC 201
++ + ++ SG LL + ++A A I +
Sbjct: 128 LSIAVTFAGSSLIAMSDYGSGSSLLKGDLLALFAAVMVAAYTLLGRIVRADTSTTVYTYI 187
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
V L + G+ L+ +FS+ +K + V
Sbjct: 188 VYFFCGLSLFAAALITRTPLTGYGSSSLICGLLLAICSTLLGHSVFSWCLKYLSPAFVSS 247
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYL 301
+ P + + ++ + + ++ I++ ++ Y
Sbjct: 248 SKLCEPPVASLFAMILFGEIPSLLQISGGIIILAGVIYYS 287
>gi|320323951|gb|EFW80035.1| RarD protein [Pseudomonas syringae pv. glycinea str. B076]
Length = 294
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/295 (15%), Positives = 110/295 (37%), Gaps = 7/295 (2%)
Query: 25 MGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY---FSGGLSLL 81
G + A L+G+ YT + + E+ R+L ++P ++ + +
Sbjct: 3 KGVVLSILASTLFGVMYFYTSLMTPLDGEEIFGWRMLLTVPCATLFMLVSGDWRRVREVT 62
Query: 82 KDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKE 141
+ P + L+ S+ +L F++A L + S YF+ P+ + G + E
Sbjct: 63 VRLRRQPLLIFALLLSSVLLGAQLLIFMWAPLHGRSLEVSLGYFLLPLSMILTGRIVYGE 122
Query: 142 RLNHLQIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMC 201
L++LQ +AA+ ++ + G + F + G +
Sbjct: 123 HLSYLQKVAAVFAMIGVGHELWRLGSFSWETLLVAGGYPLYFVLRRKLKTDHLG---GLW 179
Query: 202 VLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGI 261
+ L +W +G L + G++++ + + S G+
Sbjct: 180 FDMLLMLPIGLWFIANGHPQAIQQAPLLYLLIPVLGVISASALVSYIVASRLLPFSLSGL 239
Query: 262 MEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKNKTKKS 316
+ Y P+L++ ++ + + I + + + +A+VV ++ + + + +
Sbjct: 240 LSYVEPVLLVGVALLLG-ESIGRDEWLTYLPIWLAVVVLMIEGAKHVLTQRRRDA 293
>gi|312173046|emb|CBX81301.1| putative DMT superfamily transporter [Erwinia amylovora ATCC
BAA-2158]
Length = 292
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 92/293 (31%), Gaps = 13/293 (4%)
Query: 28 LFVFCAYILWGITPLYTQF-LEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
LF A ++W + + ++ + + +R L +L + +
Sbjct: 4 LFPLLAVLIWSVNAIVSKLSASAIDPAAISFYRWLLALLVLSPFAL----PGVWRHRQQI 59
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+LV + ++ YA + + P+++V L V ++
Sbjct: 60 KQSWWRLLVLGLLGMVMYQSLAYYAAHSVSALFMGIIAALIPLLTVLLSVVVMRLAPTRG 119
Query: 147 QIIAALLIILSLLIMTLHS--------GIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFI 198
++ +LL L+ + G+ + + ++Y +
Sbjct: 120 ILLGSLLSFCGLVWLVSRGDPAQLLIHGLGKGEMMMFAASTSYALYGVLTRRWAIALPDW 179
Query: 199 EMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLST 258
+ + I ++ F L L L + ++ G+ R S+
Sbjct: 180 QSLWMQIFFGVLLLTPVFLLAPDVSLNAHNLPLVLFAAIPASVIAPFLWIQGVMRLGASS 239
Query: 259 VGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLPTVINSGKN 311
+ P+ V +V L + + + I GI + +++ + SG+
Sbjct: 240 TSMYMNLVPIFTAVIAVGFLHEALHSYHFIGGGIALAGVILAQRLRIPLSGRR 292
>gi|317153924|ref|YP_004121972.1| hypothetical protein Daes_2220 [Desulfovibrio aespoeensis Aspo-2]
gi|316944175|gb|ADU63226.1| protein of unknown function DUF6 transmembrane [Desulfovibrio
aespoeensis Aspo-2]
Length = 301
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/272 (9%), Positives = 69/272 (25%), Gaps = 6/272 (2%)
Query: 34 YILWGITPLYTQFL-EQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLKNPKAVG 92
LW + + + + + VI R+ + F + K +G
Sbjct: 18 VTLWASSFIVLKVAFTRFDPMVVIFGRMAVASLCFLFVFRRLVRTVEYRPGDWKLLLFMG 77
Query: 93 MLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHLQI---- 148
+ + V LG + +
Sbjct: 78 VCEPGLYFIFEAMALTYTDASQAGMICALLPLMVALGARFHLGEHTSRRTFAGFALAIVG 137
Query: 149 -IAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIPA 207
+A + L V + Y K + S F +
Sbjct: 138 AVALSAAATPSATAPNPALGNFLEFLAMVCATGYMVTLKGLMPRYSPWFLTMIQAFIGSI 197
Query: 208 LFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIFSYGIKRAKLSTVGIMEYTAP 267
++ + S + L + + +++G+ + S P
Sbjct: 198 FYFPLLFLPSTAMPTTFDPLGIGAILFLGVFVTILAYGFYNFGMSKIPASQASAFVNLIP 257
Query: 268 LLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ +V + F+L + + ++ +V+ + +
Sbjct: 258 VITLVFAWFMLGERLAPLQYAASAVVLTGVFL 289
>gi|228951526|ref|ZP_04113631.1| Uncharacterized transporter [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229068721|ref|ZP_04202019.1| Uncharacterized transporter [Bacillus cereus F65185]
gi|229189258|ref|ZP_04316280.1| Uncharacterized transporter [Bacillus cereus ATCC 10876]
gi|228594217|gb|EEK52014.1| Uncharacterized transporter [Bacillus cereus ATCC 10876]
gi|228714468|gb|EEL66345.1| Uncharacterized transporter [Bacillus cereus F65185]
gi|228808091|gb|EEM54605.1| Uncharacterized transporter [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 313
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 96/292 (32%), Gaps = 11/292 (3%)
Query: 14 LSKENASLPTMMGTLFVFCAYILWGITPLYTQFLEQVSVLEVISHRVLWSLPGVFFAIVY 73
+ +++ + L + + +++G ++ + E++ R +++ + +
Sbjct: 1 MLQKSFKQEKTVPALKMIASMVIFGSVGFFSVQ-TNLPSFELVFVRCIFATIFLSVCWLL 59
Query: 74 FSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVF 133
+ K V ++ L +W F A + Y + PVI +
Sbjct: 60 TGQYKQDKWE----RKEVIQVLICGFFLVFNWVFLFKAFENMSVTIAISVYHLAPVIVLL 115
Query: 134 LGSVFLKERLNHLQIIAALLIILSLLIM------TLHSGIPLLSLAIAVTWSAYCFARKT 187
+GS+ KE+L + II+ ++ L++ + + + +
Sbjct: 116 IGSIVFKEKLTLISIISIVVCFAGALLIAGIDGSFSVGSLMSSGMIWGFLAALFYAFTTL 175
Query: 188 IPVGSSEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGLLNSFVFCIF 247
G ++ M L +++ L T + + V+ +F
Sbjct: 176 FGKGINKMSAYAMTFLQTFLGIFLLIPFIDLDAFSGLTQSNWTYIIATGFIHTGIVYYLF 235
Query: 248 SYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
++ T+ I+ + P + I+ + ++ + I M +
Sbjct: 236 FDSLRYLSTKTISILVFLDPAVAILLDTVLTGFRPTLMQITGILFIFIGMTL 287
>gi|222152361|ref|YP_002561536.1| membrane protein [Streptococcus uberis 0140J]
gi|222113172|emb|CAR40619.1| putative membrane protein [Streptococcus uberis 0140J]
Length = 306
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/300 (14%), Positives = 107/300 (35%), Gaps = 21/300 (7%)
Query: 20 SLPTMMGTLFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGL 78
P ++G+L L+G++ L+T+ Q S L ++ R L + + + L
Sbjct: 6 KHPILLGSLAALTCESLFGLSYLFTKSATSQSSPLALLGWRFLLAFLFMQLLV-----TL 60
Query: 79 SLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVF 138
+K T++ ++ S +++ + + + PVI++ S+
Sbjct: 61 GWVKLTIQGKSLGQLVKISFFSPVLYFIGETFGIKMTTASESGAFLATIPVIALMASSIL 120
Query: 139 LKERLNHLQIIAALLIILSLLIMTLHSG------IPLLSLAIAVTWSAYCFARKTIPVGS 192
L+E+ N Q++ L ++ +L G IP + I ++ +
Sbjct: 121 LREKPNRHQVMGIGLTLVGVLFTVFALGLSASFSIPGYLMLILAVIGYAFYSVHVEKATA 180
Query: 193 SEGFFIEMCVLAIPALFYVVWNGFSGGEHFFLGNIPDTLFLIGYGL---------LNSFV 243
G + +L + L + + L + +
Sbjct: 181 FSGADMTYLMLLVGGLVFPILALVEAVLKHQLYELLLLPIRHQAFSIAVLYQALACSVIA 240
Query: 244 FCIFSYGIKRAKLSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVVYLLP 303
F + ++ I + ++ + L+ I+++V L + +T ++++ + + +P
Sbjct: 241 FFLSNFAIAKIGVNKAASFIGVSTLVSILAAVLFLGEAFSQYQTFGAFLIILGVYLSNIP 300
>gi|188590641|ref|YP_001920678.1| integral membrane protein domain protein [Clostridium botulinum E3
str. Alaska E43]
gi|188500922|gb|ACD54058.1| UAA transporter family [Clostridium botulinum E3 str. Alaska E43]
Length = 302
Score = 64.2 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 81/284 (28%), Gaps = 18/284 (6%)
Query: 28 LFVFCAYILWGITPLYTQ-FLEQVSVLEVISHRVLWSLPGVFFAIVYFSGGLSLLKDTLK 86
F ++WG T + T+ L + E++ R + + K T
Sbjct: 10 FLAFFTIVVWGTTFVSTKVLLSTFTPAEIMFLRFSIAYIMLLLI------HPKFYKITSL 63
Query: 87 NPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFVTPVISVFLGSVFLKERLNHL 146
+A+ +L + + + + + E LN
Sbjct: 64 KEEALFLLAGITGGSLYFLTENSALIYSLTSNVALILATAPILTAFMAHFFSKGETLNKN 123
Query: 147 QIIAALLIILSLLIMTLHSGIPLLSLAIAVTWSAYCFARKTIPVGSSEGFFIEMCVLAIP 206
I ++ IL + ++ + L + + I + + + +
Sbjct: 124 LFIGFIIAILGVFLVIFNGNFILKLNPLGDILALSAALCWAIYSVTLKKISGTYNYIYVT 183
Query: 207 ALFYVVWNGFSGGEHFFLGNIPD-----------TLFLIGYGLLNSFVFCIFSYGIKRAK 255
+ F N L + + + +++Y +
Sbjct: 184 RKMFFYALLTILPFILFSSNNNITLLSLSQPKVIFNLLFLGVIASGVCYVVWNYTVDNLG 243
Query: 256 LSTVGIMEYTAPLLMIVSSVFILKQPIDTVRTIVFGIVVIAMVV 299
+ Y P + +++S FIL + I T +V++ + V
Sbjct: 244 IIKTNNYIYLIPAVTMIASFFILNESITLYSTFGAILVLLGVYV 287
Score = 36.4 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 1/134 (0%)
Query: 172 LAIAVTWSAYCFARKTIPVG