RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780575|ref|YP_003064988.1| hypothetical protein
CLIBASIA_02310 [Candidatus Liberibacter asiaticus str. psy62]
         (316 letters)



>2i68_A Protein EMRE; transmembrane protein, small-multidrug
           resistance, transporter, homodimer, dual topology,
           transport protein; NMR {Escherichia coli} (A:)
          Length = 137

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 22/100 (22%), Positives = 36/100 (36%)

Query: 67  VFFAIVYFSGGLSLLKDTLKNPKAVGMLVFSATILAVHWGFFIYALLTRQGFLTSFSYFV 126
           +  AI+    G +L+K +    +    +       A  W           G   +    V
Sbjct: 7   LGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGV 66

Query: 127 TPVISVFLGSVFLKERLNHLQIIAALLIILSLLIMTLHSG 166
             V+   L   F  +RL+   II  +LI   +LI+ L S 
Sbjct: 67  GIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR 106


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.329    0.143    0.434 

Gapped
Lambda     K      H
   0.267   0.0570    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 2,280,258
Number of extensions: 97198
Number of successful extensions: 190
Number of sequences better than 10.0: 1
Number of HSP's gapped: 188
Number of HSP's successfully gapped: 22
Length of query: 316
Length of database: 4,956,049
Length adjustment: 88
Effective length of query: 228
Effective length of database: 1,981,209
Effective search space: 451715652
Effective search space used: 451715652
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.3 bits)