RPSBLAST alignment for GI: 254780576 and conserved domain: TIGR02204
>gnl|CDD|131259 TIGR02204, MsbA_rel, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins. Length = 576
Score = 325 bits (836), Expect = 2e-89
Identities = 175/595 (29%), Positives = 303/595 (50%), Gaps = 45/595 (7%)
Query: 8 SLRTLKKLWPYMWPANRWDLKVRIIGAMFSVIASKFVILGIPFLLK-WVTESLIEQSTAS 66
LR L LWP++ P R R++ A+ +++ + L +P+ ++ + + S+
Sbjct: 2 RLRPLAALWPFVRP-YRG----RVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGL 56
Query: 67 KTTSYLTIGIVILITSYGTMRVVNLISNHIRDFLYVEIGQGATCTLYHQVVSHVYKLSQR 126
+ + +V L+ + GT R +L +G+ + V +H+ LS
Sbjct: 57 LNRYFAFLLVVALVLALGTA---------ARFYLVTWLGERVVADIRRAVFAHLISLSPS 107
Query: 127 FHINYKVGKLSSAISNGIRSIEMIIRIIVVHLIPTILEFAISMAFLWYSYGDIYVSIMAV 186
F + G++ S ++ ++ +I + + L + ++ + ++ + +
Sbjct: 108 FFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFIT--SPKLTSLVL 165
Query: 187 TVILYVWFTIITSNWRV-GLSKKMNNLLHECHAKVFDTLINFETIQYFNSEKFEINRLEK 245
+ V I+ RV LS++ + + + + +TL T+Q F E E +R
Sbjct: 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGG 225
Query: 246 YISKYKESAISVATSLGWLNFGQGLIFSIGMVITMIISS---------HAVYIGEQTVGD 296
+ K E+A + L +VI ++ + H V G+ + G
Sbjct: 226 AVEKAYEAARQRIRTRALL---------TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGT 276
Query: 297 ---FVFINTLLTQLAIPLNILGTIYRDSRQSFIEIEELLNILNEKIEIQNAVNSKDLKIK 353
FVF ++ A + L ++ + +++ E L+ +L + +I+ + K L +
Sbjct: 277 LGQFVFYAVMV---AGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVP 333
Query: 354 -NGHIVFNNVSFSY--NHHNCIFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIK 410
G I F V+F+Y G++ + P + AL+G SG GKST+ +LL R YD +
Sbjct: 334 LRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ 393
Query: 411 GGIITIDGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVA 470
G I +DG D++++ LR + ++PQD +LF ++ NI YG P+A+D+E+ AA A
Sbjct: 394 SGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAA 453
Query: 471 QLKSFIMKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITER 530
FI LP GYDT +GERG+ LSGG++QR++IARAILK+ PI++ DEATS+LD +E+
Sbjct: 454 HAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQ 513
Query: 531 HIQTALATLSKNRTTLVIAHRLSTITDADNIIVFDQGTVVESGSHENLISQGGIY 585
+Q AL TL K RTTL+IAHRL+T+ AD I+V DQG +V G+H LI++GG+Y
Sbjct: 514 LVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAKGGLY 568