RPSBLAST alignment for GI: 254780576 and conserved domain: TIGR02204

>gnl|CDD|131259 TIGR02204, MsbA_rel, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins. Length = 576
 Score =  325 bits (836), Expect = 2e-89
 Identities = 175/595 (29%), Positives = 303/595 (50%), Gaps = 45/595 (7%)

Query: 8   SLRTLKKLWPYMWPANRWDLKVRIIGAMFSVIASKFVILGIPFLLK-WVTESLIEQSTAS 66
            LR L  LWP++ P  R     R++ A+ +++ +    L +P+ ++  +     + S+  
Sbjct: 2   RLRPLAALWPFVRP-YRG----RVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGL 56

Query: 67  KTTSYLTIGIVILITSYGTMRVVNLISNHIRDFLYVEIGQGATCTLYHQVVSHVYKLSQR 126
               +  + +V L+ + GT           R +L   +G+     +   V +H+  LS  
Sbjct: 57  LNRYFAFLLVVALVLALGTA---------ARFYLVTWLGERVVADIRRAVFAHLISLSPS 107

Query: 127 FHINYKVGKLSSAISNGIRSIEMIIRIIVVHLIPTILEFAISMAFLWYSYGDIYVSIMAV 186
           F    + G++ S ++     ++ +I   +   +   L     +  ++ +     ++ + +
Sbjct: 108 FFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFIT--SPKLTSLVL 165

Query: 187 TVILYVWFTIITSNWRV-GLSKKMNNLLHECHAKVFDTLINFETIQYFNSEKFEINRLEK 245
             +  V   I+    RV  LS++  + + +  +   +TL    T+Q F  E  E +R   
Sbjct: 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGG 225

Query: 246 YISKYKESAISVATSLGWLNFGQGLIFSIGMVITMIISS---------HAVYIGEQTVGD 296
            + K  E+A     +   L           +VI ++  +         H V  G+ + G 
Sbjct: 226 AVEKAYEAARQRIRTRALL---------TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGT 276

Query: 297 ---FVFINTLLTQLAIPLNILGTIYRDSRQSFIEIEELLNILNEKIEIQNAVNSKDLKIK 353
              FVF   ++   A  +  L  ++ + +++    E L+ +L  + +I+   + K L + 
Sbjct: 277 LGQFVFYAVMV---AGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVP 333

Query: 354 -NGHIVFNNVSFSY--NHHNCIFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIK 410
             G I F  V+F+Y          G++  + P +  AL+G SG GKST+ +LL R YD +
Sbjct: 334 LRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ 393

Query: 411 GGIITIDGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVA 470
            G I +DG D++++    LR  + ++PQD +LF  ++  NI YG P+A+D+E+ AA   A
Sbjct: 394 SGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAA 453

Query: 471 QLKSFIMKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITER 530
               FI  LP GYDT +GERG+ LSGG++QR++IARAILK+ PI++ DEATS+LD  +E+
Sbjct: 454 HAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQ 513

Query: 531 HIQTALATLSKNRTTLVIAHRLSTITDADNIIVFDQGTVVESGSHENLISQGGIY 585
            +Q AL TL K RTTL+IAHRL+T+  AD I+V DQG +V  G+H  LI++GG+Y
Sbjct: 514 LVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAKGGLY 568