RPSBLAST alignment for GI: 254780576 and conserved domain: TIGR03796

>gnl|CDD|163508 TIGR03796, NHPM_micro_ABC1, NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin. Length = 710
 Score =  224 bits (574), Expect = 4e-59
 Identities = 154/591 (26%), Positives = 271/591 (45%), Gaps = 46/591 (7%)

Query: 17  PYMWPANRWDLKVRIIGAMFSVIASKFVILG---IPFLLK-WVTESLIEQSTASKTTSYL 72
           P +  A    L+      ++ ++A   ++L    IP   + +V E L++          L
Sbjct: 139 PSLLRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLL 198

Query: 73  TIGIVILITSYGT-MRVVNLISNHIRDFLYVEIGQGATCTLYHQVVSHVYKL-----SQR 126
            +G+  L+    T +++  L    I+  L V +          + + H+ +L     +QR
Sbjct: 199 GMGLTALLQGVLTWLQLYYLRRLQIK--LAVGMS--------ARFLWHILRLPVRFFAQR 248

Query: 127 FHINYKVGKLSSAISNGIRSIEMIIRIIVVHLIPTILEF--AISMAFLWYSYGDIYVSIM 184
                     +  I++ ++  + +   +   L  T L+    +  A L   Y  +   I 
Sbjct: 249 H---------AGDIASRVQLNDQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIG 299

Query: 185 AVTVILYVWFTIITSNWRVGLSKKMNNLLHECHAKVFDTLINFETIQYFNSEKFEINRLE 244
                + V    + S  RV  ++++     +        L + ET++    E    +R  
Sbjct: 300 IAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWA 359

Query: 245 KYISKYKESAISVATSLGWLNFGQGLIFSIGMVITMIISSHAVYIGEQTVGDFVFINTLL 304
            Y +K   +   +      L     L+ S+   + +++    V  G+ T+G  V   +L+
Sbjct: 360 GYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLM 419

Query: 305 TQLAIPLNIL---GTIYRDSRQSFIEIEELLN----ILNEKIEIQNAVNSKDLKIKNGHI 357
           +    P+N L   G   ++       ++++L      L E+ E   A +    ++  G++
Sbjct: 420 SSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLS-GYV 478

Query: 358 VFNNVSFSYNHHNC-IFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIITI 416
              N++F Y+     + +  S  + P ++ AL+G SG GKST+AKL+  LY    G I  
Sbjct: 479 ELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILF 538

Query: 417 DGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVAQLKSFI 476
           DG   ++I +E L  ++ ++ QD  LF  T+R N+   +P   D +L  A + A +   I
Sbjct: 539 DGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVI 598

Query: 477 MKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHIQTAL 536
              P GYD  + E G  LSGG++QR+ IARA+++NP I+I DEATS+LD  TE+ I   L
Sbjct: 599 TSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNL 658

Query: 537 ATLSKNR--TTLVIAHRLSTITDADNIIVFDQGTVVESGSHENLISQGGIY 585
               + R  T +++AHRLSTI D D IIV ++G VV+ G+HE L + GG Y
Sbjct: 659 ----RRRGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAVGGAY 705