RPSBLAST alignment for GI: 254780576 and conserved domain: cd03224
>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
Score = 103 bits (258), Expect = 2e-22
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 372 IFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIITIDGQDIKKI-TKESLR 430
I G+S + + AL+G +G GK+T+ K + L + G I DG+DI + E R
Sbjct: 15 ILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERAR 74
Query: 431 QTIGIIPQDTILFND-TLRYNILYGNPNASDQELCAAVEVAQLKSFIMKLPNGYDTVVGE 489
IG +P+ +F + T+ N+L G + A +E ++ +L + G
Sbjct: 75 AGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLE--RVYELFPRLKERRKQLAGT 132
Query: 490 RGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHIQTALATLSKNRTTLVI- 548
LSGGE+Q ++IARA++ P +++ DE + L I A+ L T+++
Sbjct: 133 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLV 188
Query: 549 ---AHRLSTITDADNIIVFDQGTVVESGSHENL 578
A I AD V ++G VV G+ L
Sbjct: 189 EQNARFALEI--ADRAYVLERGRVVLEGTAAEL 219