RPSBLAST alignment for GI: 254780576 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 220 bits (563), Expect = 6e-58
Identities = 96/220 (43%), Positives = 133/220 (60%), Gaps = 1/220 (0%)
Query: 355 GHIVFNNVSFSY-NHHNCIFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGI 413
G I F NVSFSY N +S I +K A+IG G GKST+ KLL LY G
Sbjct: 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGS 60
Query: 414 ITIDGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVAQLK 473
+ +DG DI+++ LR+ IG +PQD LF TLR NI G P A D+ + A E+A +
Sbjct: 61 VLLDGTDIRQLDPADLRRNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVT 120
Query: 474 SFIMKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHIQ 533
F+ K PNG D +GERG LSGG++Q V++ARA+L +PPI++ DE TS++D+ +E ++
Sbjct: 121 DFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLK 180
Query: 534 TALATLSKNRTTLVIAHRLSTITDADNIIVFDQGTVVESG 573
L L ++T ++I HR S + D IIV D G +V G
Sbjct: 181 ERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220