RPSBLAST alignment for GI: 254780576 and conserved domain: cd03248

>gnl|CDD|73007 cd03248, ABCC_TAP, TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.. Length = 226
 Score =  216 bits (552), Expect = 1e-56
 Identities = 95/217 (43%), Positives = 140/217 (64%), Gaps = 2/217 (0%)

Query: 355 GHIVFNNVSFSYNH--HNCIFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGG 412
           G + F NV+F+Y       + + +SF + P + TAL+G SG GKSTV  LL   Y  +GG
Sbjct: 10  GIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGG 69

Query: 413 IITIDGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVAQL 472
            + +DG+ I +   + L   + ++ Q+ +LF  +L+ NI YG  + S + +  A + A  
Sbjct: 70  QVLLDGKPISQYEHKYLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHA 129

Query: 473 KSFIMKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHI 532
            SFI +L +GYDT VGE+G +LSGG+KQRV+IARA+++NP ++I DEATS+LD  +E+ +
Sbjct: 130 HSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQV 189

Query: 533 QTALATLSKNRTTLVIAHRLSTITDADNIIVFDQGTV 569
           Q AL    + RT LVIAHRLST+  AD I+V D G +
Sbjct: 190 QQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226