RPSBLAST alignment for GI: 254780576 and conserved domain: cd03251

>gnl|CDD|73010 cd03251, ABCC_MsbA, MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 234
 Score =  308 bits (790), Expect = 3e-84
 Identities = 122/234 (52%), Positives = 163/234 (69%), Gaps = 1/234 (0%)

Query: 357 IVFNNVSFSYN-HHNCIFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIIT 415
           + F NV+F Y      + + IS +I   +  AL+G SG GKST+  L+ R YD+  G I 
Sbjct: 1   VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRIL 60

Query: 416 IDGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVAQLKSF 475
           IDG D++  T  SLR+ IG++ QD  LFNDT+  NI YG P A+ +E+  A   A    F
Sbjct: 61  IDGHDVRDYTLASLRRQIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEF 120

Query: 476 IMKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHIQTA 535
           IM+LP GYDTV+GERG+KLSGG++QR++IARA+LK+PPI+I DEATS+LD  +ER +Q A
Sbjct: 121 IMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAA 180

Query: 536 LATLSKNRTTLVIAHRLSTITDADNIIVFDQGTVVESGSHENLISQGGIYTSMW 589
           L  L KNRTT VIAHRLSTI +AD I+V + G +VE G+HE L++QGG+Y  + 
Sbjct: 181 LERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYAKLH 234