>gnl|CDD|73012 cd03253, ABCC_ATM1_transporter, ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 236

Score = 360 bits (926), Expect = e-100 Identities = 141/236 (59%), Positives = 183/236 (77%) Query: 357 IVFNNVSFSYNHHNCIFKGISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIITI 416 I F NV+F+Y+ + K +SF I KK A++G SG GKST+ +LL+R YD+ G I I Sbjct: 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILI 60 Query: 417 DGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVAQLKSFI 476 DGQDI+++T +SLR+ IG++PQDT+LFNDT+ YNI YG P+A+D+E+ A + AQ+ I Sbjct: 61 DGQDIREVTLDSLRRAIGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKI 120 Query: 477 MKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHIQTAL 536 M+ P+GYDT+VGERGLKLSGGEKQRV+IARAILKNPPI++ DEATS+LD TER IQ AL Sbjct: 121 MRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPILLLDEATSALDTHTEREIQAAL 180 Query: 537 ATLSKNRTTLVIAHRLSTITDADNIIVFDQGTVVESGSHENLISQGGIYTSMWKKQ 592 +SK RTT+VIAHRLSTI +AD IIV G +VE G+HE L+++GG+Y MWK Q Sbjct: 181 RDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMWKAQ 236

RPSBLAST alignment for GI: 254780576 and conserved domain: cd03253