>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269

Score = 115 bits (289), Expect = 4e-26 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 25/220 (11%) Query: 376 ISFEIAPSKKTALIGESGVGKSTVAKLLYRLYDIKGGIITIDGQDIKKITKESLR----- 430 +S ++ + ++G SG GKST+ + + RL + G + IDGQDI ++++ LR Sbjct: 43 VSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 Query: 431 ------QTIGIIPQDTILFNDTLRYNILYGNPNASDQELCAAVEVAQLKSFIMKLPNGYD 484 Q+ ++P T+L N + ++ A+E+ L+ + K P+ Sbjct: 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPD--- 159 Query: 485 TVVGERGLKLSGGEKQRVSIARAILKNPPIIIFDEATSSLDIITERHIQTALATLSKN-- 542 +LSGG +QRV +ARA+ +P I++ DEA S+LD + R +Q L L Sbjct: 160 --------ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQ 211 Query: 543 RTTLVIAHRLS-TITDADNIIVFDQGTVVESGSHENLISQ 581 +T + I H L + D I + G +V+ G+ E +++ Sbjct: 212 KTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251

RPSBLAST alignment for GI: 254780576 and conserved domain: cd03294