RPSBLAST alignment for GI: 254780576 and conserved domain: COG4608
>gnl|CDD|73178 COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]. Length = 268
Score = 121 bits (304), Expect = 7e-28
Identities = 70/245 (28%), Positives = 109/245 (44%), Gaps = 53/245 (21%)
Query: 339 IEIQNAVNSKDLKIKNGHIVFNNVSFSYNHHNCIFKGISFEIAPSKKTALIGESGVGKST 398
+E++N K + G F + G+SF I + L+GESG GKST
Sbjct: 5 LEVKN--LKKYFPVGKG--------FGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKST 54
Query: 399 VAKLLYRLYDIKGGIITIDGQDIKKITKESLRQTIGIIPQDTILFNDTLRYNILYGNPNA 458
+ +L+ L + G I +G+DI K++KE R+ +
Sbjct: 55 LGRLILGLEEPTSGEILFEGKDITKLSKEERRERV------------------------- 89
Query: 459 SDQELCAAVEVAQLKSFIMKLPNGYDTVVGERGLKLSGGEKQRVSIARAILKNPPIIIFD 518
EL V + + F+ + P+ +LSGG++QR+ IARA+ NP +I+ D
Sbjct: 90 --LELLEKVGLP--EEFLYRYPH-----------ELSGGQRQRIGIARALALNPKLIVAD 134
Query: 519 EATSSLDIITERHIQTALATLSKNR--TTLVIAHRLSTITD-ADNIIVFDQGTVVESGSH 575
E S+LD+ + I L L + T L I+H LS + +D I V G +VE G
Sbjct: 135 EPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPT 194
Query: 576 ENLIS 580
E + S
Sbjct: 195 EEVFS 199