HHsearch alignment for GI: 254780577 and conserved domain: COG0688

Probab=100.00  E-value=1.4e-45  Score=324.48  Aligned_cols=221  Identities=40%  Similarity=0.599  Sum_probs=206.2

Q ss_pred             CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCEEEEECCCCEEE
Q ss_conf             9778988862663075554999999999999999999999999999999999713--88876212766088630541432
Q gi|254780577|r    1 MNLIQAIRKILVPIHFHGWPFIVSFAAFTIIIGMWSYGLLWFGAILTVWCAYFFR--DPERVTPIDPNLLISPADGLVSA   78 (232)
Q Consensus         1 m~~~~~~~~~~~~IakEG~~~i~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~FFR--dP~R~~~~~~~~ivSPaDG~V~~   78 (232)
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~fi~~~~v~~~e~~~~~~~~~~~~~~f~r~l~~~~Rp~dp~~v~P~D~~i~~~pakG~~~s   94 (239)
T COG0688          15 FGLLAGVRSPSPIIKREIYPFIAAFLVDMSEAEKPLEPYASLNEFFTRFLKYFFRPIDPERVSPADGRIVVSPADGRVYS   94 (239)
T ss_pred             HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEE
T ss_conf             78776312787254210345778877558776310567889999999998600566998732899996799457984988


Q ss_pred             EEECCCCC-HHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCHHHCCCCCCCEEEEEEEECCCCEEEEE
Q ss_conf             33115730-00004687269999605110124897531545101314655565010120015706899997089829999
Q gi|254780577|r   79 ICEMSPPP-ELELENEVMLRLSIFMNIFDCHVNRMPIGGEVIKSVHRNGQFMNAALDKASEQNERQSLVLKTIHGNIGIV  157 (232)
Q Consensus        79 i~~~~~~~-~~~~~~~~~~~I~Ifls~~dvH~~raP~~G~V~~~~~~~G~~~~a~~~~~~~~NER~~~~~~~~~~~i~~~  157 (232)
T Consensus        95 v~~ll~~~~el~~~~~~g~~v~i~Lsp~DyHr~haP~~G~i~~~~~~~G~~~~v~~~~~~~~NER~~~~i~t~~g~v~~v  174 (239)
T COG0688          95 VEELLGPDDELAYGDRDGTRVSIFLSPFDYHRNHAPVDGTIIEVRYVPGKFFSANLDKAFTENERNSVLIETEQGKVVVV  174 (239)
T ss_pred             HHHHCCCHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEEECCCEECCCHHHHHCCCCEEEEEEECCCCCEEEE
T ss_conf             78845973564434689659999826212302747978799999998892532270045415616999998289759999


Q ss_pred             EECCCCCCEEEEECCCCCEEECCCEEEEEEECCEEEEEECCCCEEEEECCCEEEEEEEEEEEEC
Q ss_conf             8515765503651389985703866888832898999963997367622988993077879717
Q gi|254780577|r  158 QIAGFVARRIVCWVKPTMKVEAGMRFGIIRFGSRVDLFLPKDANIRVEIGQKTVAGETVIAEFN  221 (232)
Q Consensus       158 qiag~~arrI~~~~~~g~~v~~G~r~G~irfGS~vdi~lP~~~~~~V~~Gq~V~aGeTila~l~  221 (232)
T Consensus       175 ~Vga~~v~~Iv~~~~~~~~v~~G~~~G~~~fGs~gstvip~~~~~~v~~~~~v~~g~tv~~~~~  238 (239)
T COG0688         175 QVAGLVARRIVCYVKEGDTVKKGERIGGIRFGSRGSTVLPLFAEPRVAVGERVVAGETVLAGEK  238 (239)
T ss_pred             EEHHHEEEEEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEC
T ss_conf             9803413579997137827870122235420775457986578762666661036855885514