HHsearch alignment for GI: 254780577 and conserved domain: COG2190
>COG2190 NagE Phosphotransferase system IIA components [Carbohydrate transport and metabolism].
Probab=97.55 E-value=0.0023 Score=42.35 Aligned_cols=134 Identities=20% Similarity=0.222 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCEEEEEECCCCCHHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCHHHCCCCCCCEEE
Q ss_conf 76608863054143233115730000046872699996051101248975315451013146555650101200157068
Q gi|254780577|r 64 DPNLLISPADGLVSAICEMSPPPELELENEVMLRLSIFMNIFDCHVNRMPIGGEVIKSVHRNGQFMNAALDKASEQNERQ 143 (232)
Q Consensus 64 ~~~~ivSPaDG~V~~i~~~~~~~~~~~~~~~~~~I~Ifls~~dvH~~raP~~G~V~~~~~~~G~~~~a~~~~~~~~NER~ 143 (232)
T Consensus 4 ~~~~i~sP~~G~vv~Ls~VpD~vFs~----k~mGdGiAI~P~~-g~vvAPvdG~v~~iFpT-----------------kH 61 (156)
T COG2190 4 KKEEIYSPLSGEVVPLSDVPDPVFSE----KMVGDGVAIKPSE-GEVVAPVDGTVVLIFPT-----------------KH 61 (156)
T ss_pred CCEEEECCCCCEEEECHHCCCHHHHC----CCCCCCEEEECCC-CEEEECCCCEEEEEEEC-----------------CC
T ss_conf 43799764772488810487467641----5634867994689-95981268589998517-----------------84
Q ss_pred EEEEECCCCEEEEEEECC----CCCCEEEEECCCCCEEECCCEEEEEEE-----C--CEE-EEEECC--CCEEEEE--CC
Q ss_conf 999970898299998515----765503651389985703866888832-----8--989-999639--9736762--29
Q gi|254780577|r 144 SLVLKTIHGNIGIVQIAG----FVARRIVCWVKPTMKVEAGMRFGIIRF-----G--SRV-DLFLPK--DANIRVE--IG 207 (232)
Q Consensus 144 ~~~~~~~~~~i~~~qiag----~~arrI~~~~~~g~~v~~G~r~G~irf-----G--S~v-di~lP~--~~~~~V~--~G 207 (232)
T Consensus 62 Aigi~t~~GvEiLiHiGiDTV~L~GegF~~~v~~Gd~Vk~Gd~Li~fDl~~Ik~~~~s~itpvVvtN~~~~~~~~~~~~~ 141 (156)
T COG2190 62 AIGIETDEGVEILIHIGIDTVKLNGEGFESLVKEGDKVKAGDPLLEFDLDLIKAKGYSTITPVVVTNMDDFKKIVKLSGG 141 (156)
T ss_pred EEEEECCCCCEEEEEECEEEEEECCCCEEEEEECCCEECCCCEEEEECHHHHHHCCCCCEEEEEEECCHHCEEEEEECCC
T ss_conf 79998389959999956405868893247875079988159898999799996348786026999820350016761367
Q ss_pred CEEEEEEEEEEE
Q ss_conf 889930778797
Q gi|254780577|r 208 QKTVAGETVIAE 219 (232)
Q Consensus 208 q~V~aGeTila~ 219 (232)
T Consensus 142 ~~v~~g~~~~~~ 153 (156)
T COG2190 142 GEVKAGETLLLV 153 (156)
T ss_pred CCEECCCEEEEE
T ss_conf 624048743898