HHsearch alignment for GI: 254780577 and conserved domain: TIGR00163
>TIGR00163 PS_decarb phosphatidylserine decarboxylase; InterPro: IPR005221 Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.; GO: 0004609 phosphatidylserine decarboxylase activity, 0008654 phospholipid biosynthetic process.
Probab=99.04 E-value=1.1e-09 Score=84.73 Aligned_cols=169 Identities=24% Similarity=0.354 Sum_probs=131.2
Q ss_pred HHHHHCC--C-CCCCCCCCCEEEEECCCCEEEEEECCCCC--HHHCCCCCE-----------------------------
Q ss_conf 9997138--8-87621276608863054143233115730--000046872-----------------------------
Q gi|254780577|r 50 CAYFFRD--P-ERVTPIDPNLLISPADGLVSAICEMSPPP--ELELENEVM----------------------------- 95 (232)
Q Consensus 50 ~~~FFRd--P-~R~~~~~~~~ivSPaDG~V~~i~~~~~~~--~~~~~~~~~----------------------------- 95 (232)
T Consensus 16 ~~~f~~~~~~~~~p~~~~~~~~~~p~dg~~~~~g~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~d~~~ 95 (328)
T TIGR00163 16 NEFFIRPLKPETRPVDKGPNVLVSPADGLISECGIIDPDSGELLQVKGHPYSLEELLGEKSNPLAPKSASSLDLTSDEEK 95 (328)
T ss_pred HHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 45553210323565457875476326630000001145645434323664105776312110001111110123331034
Q ss_pred --------------------------------------------------------------------EEEEEEECCCCC
Q ss_conf --------------------------------------------------------------------699996051101
Q gi|254780577|r 96 --------------------------------------------------------------------LRLSIFMNIFDC 107 (232)
Q Consensus 96 --------------------------------------------------------------------~~I~Ifls~~dv 107 (232)
T Consensus 96 ~~~~~~~g~~~~g~~d~~~p~~~~~~~gd~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~c~~p~d~~~~~~~~yl~p~~y 175 (328)
T TIGR00163 96 DHELFRNGGQLAGSEDTEQPLLNFKNEGDQSVREFKPSVSKNIHLLSQLSLNYFSNGFSCSEPHDTELFFVVLYLSPRDY 175 (328)
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC
T ss_conf 45654224202466320011220135541024451220111133444432222016642477655415788775355412
Q ss_pred CEEEEEECCEEEEEEECCCCCCCHHH------CCCCCCCEEEEEEEECCCCE-EEEEEECCCCCCEEE------------
Q ss_conf 24897531545101314655565010------12001570689999708982-999985157655036------------
Q gi|254780577|r 108 HVNRMPIGGEVIKSVHRNGQFMNAAL------DKASEQNERQSLVLKTIHGN-IGIVQIAGFVARRIV------------ 168 (232)
Q Consensus 108 H~~raP~~G~V~~~~~~~G~~~~a~~------~~~~~~NER~~~~~~~~~~~-i~~~qiag~~arrI~------------ 168 (232)
T Consensus 176 h~~h~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 255 (328)
T TIGR00163 176 HRFHSPCDLVLRELRYFPGDLFPVNPLGLKNGPNLFARNERVVLLFDTEFGNRLLQIPVGATNVGSIKTNWDGEIQTNSK 255 (328)
T ss_pred CEECCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEECCCEEEEEEECCCCCEEEEEECCHHHHCCCEEEECCCCCCCCC
T ss_conf 11106632343545451652011320234304420111302789860465633332210201001000000220014664
Q ss_pred ------------EECC------CCCEEECCCEEEEEEECCEEEEEECCCC---EEEEECCCEEEEEEEEEEE
Q ss_conf ------------5138------9985703866888832898999963997---3676229889930778797
Q gi|254780577|r 169 ------------CWVK------PTMKVEAGMRFGIIRFGSRVDLFLPKDA---NIRVEIGQKTVAGETVIAE 219 (232)
Q Consensus 169 ------------~~~~------~g~~v~~G~r~G~irfGS~vdi~lP~~~---~~~V~~Gq~V~aGeTila~ 219 (232)
T Consensus 256 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~ 326 (328)
T TIGR00163 256 SDKHLPRHGCVKTWTYNAGKNLGGVKLLKGEELGGFELGSTVVLLFEAGAFELLEHLAVGDGVKIGE-LLGY 326 (328)
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCEECCCEEEEEECCCCCCHHHHHHHCCCHHCCH-HHCC
T ss_conf 3111342210456521643222331000012236500154267763155310245543012000000-1113