HHsearch alignment for GI: 254780577 and conserved domain: cd00210
>cd00210 PTS_IIA_glc PTS_IIA, PTS system, glucose/sucrose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.
Probab=97.64 E-value=0.00035 Score=47.86 Aligned_cols=102 Identities=18% Similarity=0.255 Sum_probs=61.6
Q ss_pred EEEECCCCEEEEEECCCCCHHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCHHHCCCCCCCEEEEEEE
Q ss_conf 88630541432331157300000468726999960511012489753154510131465556501012001570689999
Q gi|254780577|r 68 LISPADGLVSAICEMSPPPELELENEVMLRLSIFMNIFDCHVNRMPIGGEVIKSVHRNGQFMNAALDKASEQNERQSLVL 147 (232)
Q Consensus 68 ivSPaDG~V~~i~~~~~~~~~~~~~~~~~~I~Ifls~~dvH~~raP~~G~V~~~~~~~G~~~~a~~~~~~~~NER~~~~~ 147 (232)
T Consensus 1 i~aPv~G~vi~L~~V~D~vFs~----~~~G~G~AI~P~~-~~v~AP~~G~V~~v~~T-----------------~HAigi 58 (124)
T cd00210 1 LASPITGEIVPLDQVPDEVFAS----KMMGDGFAIKPSD-GKVVAPVDGTIVQIFPT-----------------KHAIGI 58 (124)
T ss_pred CCCCCCCEEEEHHHCCCHHHCC----CCCCCEEEEECCC-CEEECCCCEEEEEECCC-----------------CCEEEE
T ss_conf 9078784698856798858756----8822769998479-98990789799998678-----------------969999
Q ss_pred ECCCCEEEEEEECCCCCCEEEEECCCCCEEECCCEEEEEEECCEEEEEECCCCEEEEECCCEEEEEEEEEEEEC
Q ss_conf 70898299998515765503651389985703866888832898999963997367622988993077879717
Q gi|254780577|r 148 KTIHGNIGIVQIAGFVARRIVCWVKPTMKVEAGMRFGIIRFGSRVDLFLPKDANIRVEIGQKTVAGETVIAEFN 221 (232)
Q Consensus 148 ~~~~~~i~~~qiag~~arrI~~~~~~g~~v~~G~r~G~irfGS~vdi~lP~~~~~~V~~Gq~V~aGeTila~l~ 221 (232)
T Consensus 59 ~t~~G~evLiHiGiDTV~------L------~G-----------------~gF~~~v~~Gd~V~~G~-~L~~~D 102 (124)
T cd00210 59 ESDSGVEILIHIGIDTVK------L------NG-----------------EGFTSHVEEGQRVKQGD-KLLEFD 102 (124)
T ss_pred EECCCCEEEEEEEECCCC------C------CC-----------------CCEEEEECCCCEECCCC-EEEEEC
T ss_conf 968998999997304201------4------89-----------------53189974889998999-999985