HHsearch alignment for GI: 254780577 and conserved domain: pfam00358
>pfam00358 PTS_EIIA_1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.
Probab=97.90 E-value=0.00014 Score=50.46 Aligned_cols=106 Identities=15% Similarity=0.235 Sum_probs=65.7
Q ss_pred CCCEEEEECCCCEEEEEECCCCCHHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCHHHCCCCCCCEEE
Q ss_conf 76608863054143233115730000046872699996051101248975315451013146555650101200157068
Q gi|254780577|r 64 DPNLLISPADGLVSAICEMSPPPELELENEVMLRLSIFMNIFDCHVNRMPIGGEVIKSVHRNGQFMNAALDKASEQNERQ 143 (232)
Q Consensus 64 ~~~~ivSPaDG~V~~i~~~~~~~~~~~~~~~~~~I~Ifls~~dvH~~raP~~G~V~~~~~~~G~~~~a~~~~~~~~NER~ 143 (232)
T Consensus 2 ~~~~i~aP~~G~vi~L~~V~D~vFs~----~~~G~G~AI~P~~-~~v~AP~~G~V~~v~~T-----------------~H 59 (133)
T pfam00358 2 SDETLASPITGEIVPLDQVPDQVFAS----KMMGDGFAIKPSD-GKVVAPVDGTIVQIFPT-----------------KH 59 (133)
T ss_pred CCCEEEECCCCEEEEHHHCCCHHHCC----CCCCCEEEEECCC-CEEEECCCEEEEEECCC-----------------CC
T ss_conf 76689602782798845698847656----8822769998479-97990789799998689-----------------97
Q ss_pred EEEEECCCCEEEEEEECCCCCCEEEEECCCCCEEECCCEEEEEEECCEEEEEECCCCEEEEECCCEEEEEEEEEEEEC
Q ss_conf 999970898299998515765503651389985703866888832898999963997367622988993077879717
Q gi|254780577|r 144 SLVLKTIHGNIGIVQIAGFVARRIVCWVKPTMKVEAGMRFGIIRFGSRVDLFLPKDANIRVEIGQKTVAGETVIAEFN 221 (232)
Q Consensus 144 ~~~~~~~~~~i~~~qiag~~arrI~~~~~~g~~v~~G~r~G~irfGS~vdi~lP~~~~~~V~~Gq~V~aGeTila~l~ 221 (232)
T Consensus 60 Aigi~~~~G~eiLiHiGiD-------------TV~---------L~G-------~gF~~~v~~Gd~V~~G~-~L~~~D 107 (133)
T pfam00358 60 AIGIESDGGVEILIHVGID-------------TVK---------LNG-------EGFESHVEEGDRVKQGD-KLLEFD 107 (133)
T ss_pred EEEEEECCCCEEEEEECCC-------------CEE---------CCC-------CCEEEEECCCCEECCCC-EEEEEC
T ss_conf 9999968998999998645-------------223---------389-------63189975899998999-999985