HHSEARCH alignment of GI: 254780577 and SCOP domain: d2gpra_

Alignment
>d2gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Mycoplasma capricolum [TaxId: 2095]}
Probab=97.97  E-value=2.2e-05  Score=52.81  Aligned_cols=130  Identities=14%  Similarity=0.201  Sum_probs=85.9

Q ss_pred             CEEEEECCCCEEEEEECCCCCHHHCCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCHHHCCCCCCCEEEEE
Q ss_conf             60886305414323311573000004687269999605110124897531545101314655565010120015706899
Q gi|254780577|r   66 NLLISPADGLVSAICEMSPPPELELENEVMLRLSIFMNIFDCHVNRMPIGGEVIKSVHRNGQFMNAALDKASEQNERQSL  145 (232)
Q Consensus        66 ~~ivSPaDG~V~~i~~~~~~~~~~~~~~~~~~I~Ifls~~dvH~~raP~~G~V~~~~~~~G~~~~a~~~~~~~~NER~~~  145 (232)
                      -.++||++|++..++++.|+.-.+  +--..-+.|.  |-+ +...||++|+|..+.-.                 +-.+
T Consensus         8 ~~i~aP~~G~vi~l~~v~D~vFs~--k~~G~G~aI~--P~~-~~v~AP~dG~I~~i~~T-----------------~HAi   65 (154)
T d2gpra_           8 LKVLAPCDGTIITLDEVEDEVFKE--RMLGDGFAIN--PKS-NDFHAPVSGKLVTAFPT-----------------KHAF   65 (154)
T ss_dssp             EEEECSSSEEEECGGGSSCHHHHT--TSSCEEEEEE--ESS-SEEECSSCEEEEECCTT-----------------CSEE
T ss_pred             EEEEECCCCEEEECCCCCCHHHCC--CCCCCEEEEE--ECC-CEEEEECCEEEEEECCC-----------------CCEE
T ss_conf             199962773698811088856556--8973769999--659-97998538099998778-----------------9699


Q ss_pred             EEECCCCEEEEEEECC----CCCCEEEEECCCCCEEECCCEEEEEEE------C-C-EEEEEECC--CCEEEEECCCEEE
Q ss_conf             9970898299998515----765503651389985703866888832------8-9-89999639--9736762298899
Q gi|254780577|r  146 VLKTIHGNIGIVQIAG----FVARRIVCWVKPTMKVEAGMRFGIIRF------G-S-RVDLFLPK--DANIRVEIGQKTV  211 (232)
Q Consensus       146 ~~~~~~~~i~~~qiag----~~arrI~~~~~~g~~v~~G~r~G~irf------G-S-~vdi~lP~--~~~~~V~~Gq~V~  211 (232)
                      .+++++|.-.+++++-    +-..-..+.+++||+|++||.+.-+-+      | + .+-+.+.+  +.++.+.....|+
T Consensus        66 gi~t~~G~eiLIHiGidTV~L~G~gF~~~v~~Gd~V~~G~~L~~~D~~~i~~~g~~~~t~vvitn~~~~~~~~~~~g~V~  145 (154)
T d2gpra_          66 GIQTKSGVEILLHIGLDTVSLDGNGFESFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKSPIIFTNNGGKTLEIVKMGEVK  145 (154)
T ss_dssp             EEECTTSCEEEEECSSSGGGGTTCSEEECCCTTCEECTTCEEEEECHHHHHHHSSCCCEEEEEEECSSCCCSCBCCEEEC
T ss_pred             EEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCEECCCCEEEEECHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCC
T ss_conf             99918998999997636101588326899548999908999999859999863999844999986987257762468575


Q ss_pred             EEEEEE
Q ss_conf             307787
Q gi|254780577|r  212 AGETVI  217 (232)
Q Consensus       212 aGeTil  217 (232)
                      +|++++
T Consensus       146 ~Gd~i~  151 (154)
T d2gpra_         146 QGDVVA  151 (154)
T ss_dssp             TTCEEE
T ss_pred             CCCEEE
T ss_conf             899999


SCOP domain information

class: All beta proteins
fold: Barrel-sandwich hybrid
superfamily: Duplicated hybrid motif
family: Glucose permease-like
domain: Glucose permease IIa domain, IIa-glc
species: Mycoplasma capricolum [TaxId: 2095]