BLAST/PSIBLAST alignment of GI: 254780579 and GI: 116254067 at iteration 1
>gi|116254067|ref|YP_769905.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 236
>gi|115258715|emb|CAK09820.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 236
 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 2   RYFWYGLFVCLIFFIM---GFISFIRYVKQMHIPDHPSVSAIVVLTGEPIRIERAFELLE 58
           R   +G F CL+   +   GF+ F   V  +  P  P   AIVVLTG   RI++A ELL+
Sbjct: 30  RLLRWGGFACLLAIALVFGGFLRFADSVTTLKPPTEPKADAIVVLTGGYQRIDQAVELLQ 89

Query: 59  NQIGEKIFISGVHHSVSKDILLQKIPIRQDLAECCIDIGYKALNTEGNAQEASAWAEKNN 118
              G+++ ISG H + +   + +      DL  CC+DIGY A++T GNA+EAS W     
Sbjct: 90  KGAGKRLLISGAHPTTTPAQIRKMTQGSADLFSCCVDIGYDAIDTIGNAEEASNWIHAKG 149

Query: 119 FHHVLIVTHDYHMPRTFLELQRINSTVQFIPYPIISHDLEENSSIFKIKILRVLLIEYLK 178
           +  VLIVT++YHMPR+  EL  ++  ++FI YP+++ DL+  +       +RV+L EY+K
Sbjct: 150 YRSVLIVTNNYHMPRSLAELSYVDPDIEFIAYPVVNSDLKSRNWFTDPNAMRVMLAEYVK 209

Query: 179 ILLLSIQ 185
           +LL   +
Sbjct: 210 VLLTGAR 216