RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780581|ref|YP_003064994.1| hypothetical protein
CLIBASIA_02340 [Candidatus Liberibacter asiaticus str. psy62]
         (33 letters)



>gnl|CDD|181031 PRK07562, PRK07562, ribonucleotide-diphosphate reductase subunit
           alpha; Validated.
          Length = 1220

 Score = 24.5 bits (54), Expect = 5.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 19  MLAVENDFEWNL 30
           + AVEND +WNL
Sbjct: 408 LRAVENDGDWNL 419


>gnl|CDD|183508 PRK12408, PRK12408, glucokinase; Provisional.
          Length = 336

 Score = 24.3 bits (53), Expect = 7.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 6   FCGFLPKRAGDLSML 20
           FCGFL    GD+++ 
Sbjct: 255 FCGFLGSVVGDMALA 269


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.333    0.148    0.506 

Gapped
Lambda     K      H
   0.267   0.0664    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 536,839
Number of extensions: 13736
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 3
Length of query: 33
Length of database: 5,994,473
Length adjustment: 7
Effective length of query: 26
Effective length of database: 5,843,217
Effective search space: 151923642
Effective search space used: 151923642
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 50 (23.2 bits)