HHsearch alignment for GI: 254780582 and conserved domain: COG1889

>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=92.28  E-value=0.6  Score=25.47  Aligned_cols=151  Identities=16%  Similarity=0.125  Sum_probs=82.9

Q ss_pred             HHHHHH--HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHC---CCCEEEEEECHHHHHHH----HHC
Q ss_conf             899996--128898999999999999750104897599965388111355312---38748873058999832----311
Q gi|254780582|r    6 VELRQF--YSSFLGKCTTDAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGK---VERTLAFMPAGQGATNW----PDQ   76 (242)
Q Consensus         6 ~~l~~w--Y~s~~G~~~~~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~   76 (242)
T Consensus        49 ~eYR~Wnp~RSKLaAaIl----~Gl~-~~pi~~g~~VLYLGAasGTTvSHVSDIv~~G~iYaVEfs~R~~reLl~~a~~R  123 (231)
T COG1889          49 EEYREWNPRRSKLAAAIL----KGLK-NFPIKEGSKVLYLGAASGTTVSHVSDIVGEGRIYAVEFSPRPMRELLDVAEKR  123 (231)
T ss_pred             CCEEEECCCHHHHHHHHH----CCCC-CCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHC
T ss_conf             505656765137799997----3700-27769998789950367985767776047870899996444699999998747


Q ss_pred             CCCCEEEECHH---HCCCCCCCCCCHHHHHHHHHHCCHHH---HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCC
Q ss_conf             68623653336---56775472020022024775229999---9999998469998899973387740345653276656
Q gi|254780582|r   77 YFSSTALVSEG---NLPLADSSVDCVLMVHYLEFAEDPFL---MLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGSG  150 (242)
Q Consensus        77 ~~~~~~~~d~~---~LPf~~~sfD~Vi~~h~LE~~~dp~~---~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~~  150 (242)
T Consensus       124 ~Ni~PIL~DA~~P~~Y~~~Ve~VDviy~D-----VAQp~Qa~I~~~Na~~FLk~~G~~~i~iKAr-SI----dvT~d--p  191 (231)
T COG1889         124 PNIIPILEDARKPEKYRHLVEKVDVIYQD-----VAQPNQAEILADNAEFFLKKGGYVVIAIKAR-SI----DVTAD--P  191 (231)
T ss_pred             CCCEEEECCCCCCHHHHHHCCCCCEEEEE-----CCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE-CC----CCCCC--H
T ss_conf             87400201368837765312454389983-----6881078999988997321697399999851-23----04589--8


Q ss_pred             CCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf             557888999999962876212578
Q gi|254780582|r  151 QPYSWYQMISLLREANFTLSITSR  174 (242)
Q Consensus       151 r~~~~~~l~~~l~~~gf~~~~~~~  174 (242)
T Consensus       192 ~-~vf~~ev~kL~~~~f~i~e~~~  214 (231)
T COG1889         192 E-EVFKDEVEKLEEGGFEILEVVD  214 (231)
T ss_pred             H-HHHHHHHHHHHHCCCEEEEEEC
T ss_conf             9-9999999999856950467763