HHsearch alignment for GI: 254780582 and conserved domain: COG1889
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=92.28 E-value=0.6 Score=25.47 Aligned_cols=151 Identities=16% Similarity=0.125 Sum_probs=82.9
Q ss_pred HHHHHH--HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHC---CCCEEEEEECHHHHHHH----HHC
Q ss_conf 899996--128898999999999999750104897599965388111355312---38748873058999832----311
Q gi|254780582|r 6 VELRQF--YSSFLGKCTTDAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGK---VERTLAFMPAGQGATNW----PDQ 76 (242)
Q Consensus 6 ~~l~~w--Y~s~~G~~~~~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~ 76 (242)
T Consensus 49 ~eYR~Wnp~RSKLaAaIl----~Gl~-~~pi~~g~~VLYLGAasGTTvSHVSDIv~~G~iYaVEfs~R~~reLl~~a~~R 123 (231)
T COG1889 49 EEYREWNPRRSKLAAAIL----KGLK-NFPIKEGSKVLYLGAASGTTVSHVSDIVGEGRIYAVEFSPRPMRELLDVAEKR 123 (231)
T ss_pred CCEEEECCCHHHHHHHHH----CCCC-CCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHC
T ss_conf 505656765137799997----3700-27769998789950367985767776047870899996444699999998747
Q ss_pred CCCCEEEECHH---HCCCCCCCCCCHHHHHHHHHHCCHHH---HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCC
Q ss_conf 68623653336---56775472020022024775229999---9999998469998899973387740345653276656
Q gi|254780582|r 77 YFSSTALVSEG---NLPLADSSVDCVLMVHYLEFAEDPFL---MLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGSG 150 (242)
Q Consensus 77 ~~~~~~~~d~~---~LPf~~~sfD~Vi~~h~LE~~~dp~~---~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~~ 150 (242)
T Consensus 124 ~Ni~PIL~DA~~P~~Y~~~Ve~VDviy~D-----VAQp~Qa~I~~~Na~~FLk~~G~~~i~iKAr-SI----dvT~d--p 191 (231)
T COG1889 124 PNIIPILEDARKPEKYRHLVEKVDVIYQD-----VAQPNQAEILADNAEFFLKKGGYVVIAIKAR-SI----DVTAD--P 191 (231)
T ss_pred CCCEEEECCCCCCHHHHHHCCCCCEEEEE-----CCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE-CC----CCCCC--H
T ss_conf 87400201368837765312454389983-----6881078999988997321697399999851-23----04589--8
Q ss_pred CCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf 557888999999962876212578
Q gi|254780582|r 151 QPYSWYQMISLLREANFTLSITSR 174 (242)
Q Consensus 151 r~~~~~~l~~~l~~~gf~~~~~~~ 174 (242)
T Consensus 192 ~-~vf~~ev~kL~~~~f~i~e~~~ 214 (231)
T COG1889 192 E-EVFKDEVEKLEEGGFEILEVVD 214 (231)
T ss_pred H-HHHHHHHHHHHHCCCEEEEEEC
T ss_conf 9-9999999999856950467763