HHsearch alignment for GI: 254780582 and conserved domain: COG2813
>COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis].
Probab=98.57 E-value=3.1e-07 Score=61.35 Aligned_cols=108 Identities=16% Similarity=0.156 Sum_probs=68.5
Q ss_pred HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCC--CEEEE-EECHHHHHHHHH----CCCCC-EEEECHHHCCCCCCCC
Q ss_conf 9999975010489759996538811135531238--74887-305899983231----16862-3653336567754720
Q gi|254780582|r 25 SKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGKVE--RTLAF-MPAGQGATNWPD----QYFSS-TALVSEGNLPLADSSV 96 (242)
Q Consensus 25 ~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~~~--~~~~~-~~~~~~~~~~~~----~~~~~-~~~~d~~~LPf~~~sf 96 (242)
T Consensus 147 S~lLl~~l~~~~~~~vlDlGCG~Gvlg~~la~~~p~~~vtmvDvn~~Av~~ar~Nl~~N~~~~~~v~~s~~~~~v~~-kf 225 (300)
T COG2813 147 SRLLLETLPPDLGGKVLDLGCGYGVLGLVLAKKSPQAKLTLVDVNARAVESARKNLAANGVENTEVWASNLYEPVEG-KF 225 (300)
T ss_pred HHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CC
T ss_conf 89999737755699688707884299999998689872899826699999988769973987637998124466544-00
Q ss_pred CCHHHHHHHHH----HC-CHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 20022024775----22-999999999984699988999733
Q gi|254780582|r 97 DCVLMVHYLEF----AE-DPFLMLHEIWRVLTSGGRMIVVVP 133 (242)
Q Consensus 97 D~Vi~~h~LE~----~~-dp~~~L~Ei~RvLkPgG~lii~~~ 133 (242)
T Consensus 226 d~IisNPPfh~G~~v~~~~~~~ii~~A~~~L~~gGeL~iVan 267 (300)
T COG2813 226 DLIISNPPFHAGKAVVHSLAQEIIAAAARHLKPGGELWIVAN 267 (300)
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 689848884677101678899999999976045977999975