HHsearch alignment for GI: 254780582 and conserved domain: PRK00121
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed.
Probab=97.98 E-value=3.5e-05 Score=49.67 Aligned_cols=94 Identities=18% Similarity=0.129 Sum_probs=65.4
Q ss_pred CCEEEEECCCCCHHHHHHHCC---CCEEEEEECHHHHHHHH----HC--CCCCEEEECHHHC-C--CCCCCCCCHHHHHH
Q ss_conf 975999653881113553123---87488730589998323----11--6862365333656-7--75472020022024
Q gi|254780582|r 37 GCRLLGLGYAIPFFSCFHGKV---ERTLAFMPAGQGATNWP----DQ--YFSSTALVSEGNL-P--LADSSVDCVLMVHY 104 (242)
Q Consensus 37 g~~vLdiGcg~g~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~--~~~~~~~~d~~~L-P--f~~~sfD~Vi~~h~ 104 (242)
T Consensus 55 ~p~~lEIGfG~G~~l~~~A~~~P~~~fIGiE~~~~gv~~~~~~~~~~~l~Ni~i~~~da~~~l~~~~~~~s~~~i~i~F- 133 (229)
T PRK00121 55 APIHLEIGFGRGEFLVEMAKANPDINFIGIEIHEPGVAKALKKIEEAGLKNLRLLCGDAVEVLEHFLPDGSLDRIYLNF- 133 (229)
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEECC-
T ss_conf 9439996158969999999868888689999616999999999998299838988347899999714645414046717-
Q ss_pred HHHHCCH-------------HHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 7752299-------------999999998469998899973387
Q gi|254780582|r 105 LEFAEDP-------------FLMLHEIWRVLTSGGRMIVVVPNK 135 (242)
Q Consensus 105 LE~~~dp-------------~~~L~Ei~RvLkPgG~lii~~~n~ 135 (242)
T Consensus 134 ----PDPWpKkrH~KRRli~~~fl~~~~~~Lk~~G~i~~~TD~~ 173 (229)
T PRK00121 134 ----PDPWPKKRHHKRRLVQPEFLELYARVLKPGGEFHFATDWE 173 (229)
T ss_pred ----CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCH
T ss_conf ----9999763202401289999999998579998899981879