HHsearch alignment for GI: 254780582 and conserved domain: PRK00517

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed.
Probab=98.64  E-value=1.5e-07  Score=63.20  Aligned_cols=127  Identities=13%  Similarity=0.082  Sum_probs=83.1

Q ss_pred             HHHHHHCCCCCCCEEEEECCCCCHHHHHHH--CCCCEEEEEECHHHHHHHHHC---CCCC-EEEECHHHCCCCCCCCCCH
Q ss_conf             999975010489759996538811135531--238748873058999832311---6862-3653336567754720200
Q gi|254780582|r   26 KVLSTTWDDVTGCRLLGLGYAIPFFSCFHG--KVERTLAFMPAGQGATNWPDQ---YFSS-TALVSEGNLPLADSSVDCV   99 (242)
Q Consensus        26 ~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~d~~~LPf~~~sfD~V   99 (242)
T Consensus       154 ~~l~~~--~~~~~~vLDvG~GSGILaIaA~klGa~~v~a~DiD~~Av~~a~eN~~lN~v~~~~~~~~~~~~~~~~~~Dlv  231 (298)
T PRK00517        154 EWLEKL--VLPGKTVLDVGCGSGILAIAAAKLGAKPVLAIDIDPQAVEAARENAELNGVDDRLELYLPEDQPLEGKADVI  231 (298)
T ss_pred             HHHHHH--CCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEE
T ss_conf             999843--546886887157706999999974998499998989999999999998699842689616643446764689


Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf             220247752299999999998469998899973387740345653276656557888999999962876212578
Q gi|254780582|r  100 LMVHYLEFAEDPFLMLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGSGQPYSWYQMISLLREANFTLSITSR  174 (242)
Q Consensus       100 i~~h~LE~~~dp~~~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~~r~~~~~~l~~~l~~~gf~~~~~~~  174 (242)
T Consensus       232 vANIla~v---l~~l~~~~~~~l~~~G~lilSGIl~-----------------~~~~~v~~~~~~~g~~~~~~~~  286 (298)
T PRK00517        232 VANILANP---LIELAPDLAALVKPGGRLILSGILA-----------------EQADEVLEAYEDAGFTLDEVAE  286 (298)
T ss_pred             EEECCHHH---HHHHHHHHHHHHCCCCEEEEECCCH-----------------HHHHHHHHHHHHCCCEEEEEEE
T ss_conf             97315899---9999999999738997999927848-----------------8999999999987998978860