HHsearch alignment for GI: 254780582 and conserved domain: PRK03522

>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed.
Probab=94.11  E-value=0.25  Score=27.64  Aligned_cols=64  Identities=5%  Similarity=-0.027  Sum_probs=41.0

Q ss_pred             HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHC-CCCEEEEEECHHHHHHHH
Q ss_conf             996128898999999999999750104897599965388111355312-387488730589998323
Q gi|254780582|r    9 RQFYSSFLGKCTTDAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGK-VERTLAFMPAGQGATNWP   74 (242)
Q Consensus         9 ~~wY~s~~G~~~~~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~-~~~~~~~~~~~~~~~~~~   74 (242)
T Consensus       208 ~sFfQvN~~--~~~~L~~~~~~~~~~~~~~~vlDlycG~G~~sl~lA~~~~~V~gvE~~~~av~~A~  272 (375)
T PRK03522        208 QSFFQTNPA--VAAQLYATARDWVRELPPKSMWDLFCGVGGFGLHCATPDMQLTGIEISAEAIACAK  272 (375)
T ss_pred             CCCCCCCHH--HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECHHHHHHHH
T ss_conf             321465999--99999999999863158978999657853888987641788999984599999999