HHsearch alignment for GI: 254780582 and conserved domain: PRK03522
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed.
Probab=94.11 E-value=0.25 Score=27.64 Aligned_cols=64 Identities=5% Similarity=-0.027 Sum_probs=41.0
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHC-CCCEEEEEECHHHHHHHH
Q ss_conf 996128898999999999999750104897599965388111355312-387488730589998323
Q gi|254780582|r 9 RQFYSSFLGKCTTDAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGK-VERTLAFMPAGQGATNWP 74 (242)
Q Consensus 9 ~~wY~s~~G~~~~~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 74 (242)
T Consensus 208 ~sFfQvN~~--~~~~L~~~~~~~~~~~~~~~vlDlycG~G~~sl~lA~~~~~V~gvE~~~~av~~A~ 272 (375)
T PRK03522 208 QSFFQTNPA--VAAQLYATARDWVRELPPKSMWDLFCGVGGFGLHCATPDMQLTGIEISAEAIACAK 272 (375)
T ss_pred CCCCCCCHH--HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECHHHHHHHH
T ss_conf 321465999--99999999999863158978999657853888987641788999984599999999