HHsearch alignment for GI: 254780582 and conserved domain: PRK09489

>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional.
Probab=98.55  E-value=7.8e-07  Score=59.08  Aligned_cols=109  Identities=15%  Similarity=0.121  Sum_probs=66.7

Q ss_pred             HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCC---CEEEEEECHHHHHHHHHC---C--CCCEEEECHHHCCCCCCCC
Q ss_conf             9999975010489759996538811135531238---748873058999832311---6--8623653336567754720
Q gi|254780582|r   25 SKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGKVE---RTLAFMPAGQGATNWPDQ---Y--FSSTALVSEGNLPLADSSV   96 (242)
Q Consensus        25 ~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~--~~~~~~~d~~~LPf~~~sf   96 (242)
T Consensus       185 S~lLL~~l~~~~~g~VLDlGCG~Gvi~~~la~~~p~~~v~l~Dv~a~Al~~ar~nl~~N~l~~~v~~sd~--~~~v~~~f  262 (342)
T PRK09489        185 SQLLLSTLTPHTKGKVLDVGCGAGVLSAVLAQHSPKIRLTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEIKGRF  262 (342)
T ss_pred             HHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCC--CCCCCCCC
T ss_conf             9999973783248847860678179999999869997699996889999999998998098868997564--45655678


Q ss_pred             CCHHHHHHHHH----H-CCHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf             20022024775----2-2999999999984699988999733877
Q gi|254780582|r   97 DCVLMVHYLEF----A-EDPFLMLHEIWRVLTSGGRMIVVVPNKR  136 (242)
Q Consensus        97 D~Vi~~h~LE~----~-~dp~~~L~Ei~RvLkPgG~lii~~~n~~  136 (242)
T Consensus       263 D~IvsNPPFH~G~~~~~~i~~~fi~~A~~~L~~gG~L~iVA-Nr~  306 (342)
T PRK09489        263 DMIISNPPFHDGIQTSLDAAQTLIRGAVRHLNSGGELRIVA-NAF  306 (342)
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE-CCC
T ss_conf             98996885215752658999999999998612498899998-189