HHsearch alignment for GI: 254780582 and conserved domain: PRK13341

Probab=96.16  E-value=0.1  Score=29.93  Aligned_cols=174  Identities=13%  Similarity=0.002  Sum_probs=105.7

Q ss_pred             HHHHHHHHCCHHHHHH--HHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHH---CCCCEEEEEECHHHHHHHHHCC--
Q ss_conf             8899996128898999--99999999975010489759996538811135531---2387488730589998323116--
Q gi|254780582|r    5 IVELRQFYSSFLGKCT--TDAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHG---KVERTLAFMPAGQGATNWPDQY--   77 (242)
Q Consensus         5 i~~l~~wY~s~~G~~~--~~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--   77 (242)
T Consensus       459 ~~~~~~w~~r~~~~~~~~l~~~~~rl~~~~~~qr~~~vl~l~~~sll~~~~~l~~~peggv~~~~~~~~~~~rL~aQl~l  538 (726)
T PRK13341        459 DPELERWLQRQLGQEGERLRILRDRLWSGITWQRHDRVLNLANRSLLWALEPLRAVPEGGVTVLCESSDDIVRLEAQLDL  538 (726)
T ss_pred             CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf             65789999998731437999999998433665634359983385126526778618998669983788899999999874


Q ss_pred             ---CCC-E-EEE---CHHHCCCCCCCCCCHHHHHHHHHHCCHH--HHHHHHHHHCCCCCEEEEEECCCCCCHHHHH----
Q ss_conf             ---862-3-653---3365677547202002202477522999--9999999846999889997338774034565----
Q gi|254780582|r   78 ---FSS-T-ALV---SEGNLPLADSSVDCVLMVHYLEFAEDPF--LMLHEIWRVLTSGGRMIVVVPNKRGMWARME----  143 (242)
Q Consensus        78 ---~~~-~-~~~---d~~~LPf~~~sfD~Vi~~h~LE~~~dp~--~~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~----  143 (242)
T Consensus       539 LdpL~RP~Ll~~~~~~l~~L-~~~~~FE~IgGR~~~~~l~~~~~~~~~q~L~~~l~p~g~l~Ll~S~P~~Gpa~all~~~  617 (726)
T PRK13341        539 LDPLGRPVLLDAGLLALKYL-PANLQFEWIGGRNGLDDLLYKADEELWQQLTEKLTPNGGLRLLISQPEAGPALALLLKA  617 (726)
T ss_pred             CCHHCCCCEEECCCHHHHHC-CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCC
T ss_conf             68111971121671146537-98764247833320023422569999999998659986699863577648078873569


Q ss_pred             ------------HCCCCCCCCCCHHHHHHHHHHCCCCCEE--EEEEEEEC
Q ss_conf             ------------3276656557888999999962876212--57898308
Q gi|254780582|r  144 ------------HTPFGSGQPYSWYQMISLLREANFTLSI--TSRSLFFP  179 (242)
Q Consensus       144 ------------~~~~~~~r~~~~~~l~~~l~~~gf~~~~--~~~~~~~p  179 (242)
T Consensus       618 ~~~~~~l~~L~~aEe~wl~~~~~~~~Lqq~le~~gwsl~~e~W~e~lsL~  667 (726)
T PRK13341        618 PVEDKLLSALLEAEELWLKSQSMPALLQQQLEEAGWSLGIEEWTEELSLG  667 (726)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEHHCCCCCC
T ss_conf             40489999999999999626888599999999748845351300156787