HHsearch alignment for GI: 254780582 and conserved domain: TIGR02752
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase; InterPro: IPR014122 MenG is a generic term for a methyltransferase that catalyses the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species..
Probab=99.17 E-value=1.3e-10 Score=80.66 Aligned_cols=150 Identities=15% Similarity=0.080 Sum_probs=110.5
Q ss_pred HHHHHHCCCCCCCEEEEECCCCCHHHHHH----HCCCCEEEEEECHHHHHHHHHC------CCCCEEEECHHHCCCCCCC
Q ss_conf 99997501048975999653881113553----1238748873058999832311------6862365333656775472
Q gi|254780582|r 26 KVLSTTWDDVTGCRLLGLGYAIPFFSCFH----GKVERTLAFMPAGQGATNWPDQ------YFSSTALVSEGNLPLADSS 95 (242)
Q Consensus 26 ~~l~~~l~~~~g~~vLdiGcg~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~~~LPf~~~s 95 (242)
T Consensus 35 ~~~m~~m~v~~G~~~ldvCCGt~dW~~~l~~~~G~~G~v~Gldfs~nml~~~~~k~~~~~~~~~~l~hGnam~lP~~~~~ 114 (231)
T TIGR02752 35 KDTMKRMNVQKGKKALDVCCGTADWAIALAEAVGKEGEVKGLDFSENMLSVGKQKVKDAKLSNVELVHGNAMELPYDDNS 114 (231)
T ss_pred HHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCHHCCCCCCCC
T ss_conf 99987765640412112103733788898886177771674003588999999888754320022230520017877666
Q ss_pred CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH--------CC-------------CC----CC
Q ss_conf 0200220247752299999999998469998899973387740345653--------27-------------66----56
Q gi|254780582|r 96 VDCVLMVHYLEFAEDPFLMLHEIWRVLTSGGRMIVVVPNKRGMWARMEH--------TP-------------FG----SG 150 (242)
Q Consensus 96 fD~Vi~~h~LE~~~dp~~~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~--------~~-------------~~----~~ 150 (242)
T Consensus 115 fdyvtiGfGlrnvPdy~~vl~em~rv~kPGG~~~C~~tsqP~~~~~~q~y~~yf~~~mP~~Gk~~ak~y~eysWlqes~~ 194 (231)
T TIGR02752 115 FDYVTIGFGLRNVPDYMTVLKEMARVVKPGGKVVCLETSQPTLPGFKQLYFFYFKYIMPLFGKLFAKSYKEYSWLQESAR 194 (231)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 12577525512302699999998886279971798625776257999999999999988777888643345577777765
Q ss_pred CCCCHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 5578889999999628762125789
Q gi|254780582|r 151 QPYSWYQMISLLREANFTLSITSRS 175 (242)
Q Consensus 151 r~~~~~~l~~~l~~~gf~~~~~~~~ 175 (242)
T Consensus 195 ~fPG~~~l~~~f~~~G~~~v~~~~~ 219 (231)
T TIGR02752 195 EFPGKDELAEMFKEAGLKDVEVKSY 219 (231)
T ss_pred HCCCHHHHHHHHHHCCHHHEEEEEC
T ss_conf 1786789999998527011223100