HHsearch alignment for GI: 254780582 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=93.68 E-value=0.44 Score=26.23 Aligned_cols=96 Identities=11% Similarity=0.008 Sum_probs=54.2
Q ss_pred CCCCCCCEEEEECCCC-CHHHHHHHC---CCCEEEEEECHHHHHHHHHCCCCCEEEECHHHC-----CCCCC-CCCCHHH
Q ss_conf 0104897599965388-111355312---387488730589998323116862365333656-----77547-2020022
Q gi|254780582|r 32 WDDVTGCRLLGLGYAI-PFFSCFHGK---VERTLAFMPAGQGATNWPDQYFSSTALVSEGNL-----PLADS-SVDCVLM 101 (242)
Q Consensus 32 l~~~~g~~vLdiGcg~-g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~L-----Pf~~~-sfD~Vi~ 101 (242)
T Consensus 172 ~~~~~g~~VlV~GaG~iGl~a~~~ak~~Ga~~Vi~~d~~~~rl~~A~~lGa~~~i~~~~~~~~~~v~~~t~g~G~Dvvi- 250 (358)
T TIGR03451 172 GGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVI- 250 (358)
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCEEE-
T ss_conf 0799998899967376999999999983991899991988999999965990997399878899999985898874999-
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 02477522999999999984699988999733
Q gi|254780582|r 102 VHYLEFAEDPFLMLHEIWRVLTSGGRMIVVVP 133 (242)
Q Consensus 102 ~h~LE~~~dp~~~L~Ei~RvLkPgG~lii~~~ 133 (242)
T Consensus 251 ----e~~G~~~-~~~~al~~~~~gG~iv~~G~ 277 (358)
T TIGR03451 251 ----DAVGRPE-TYKQAFYARDLAGTVVLVGV 277 (358)
T ss_pred ----ECCCCHH-HHHHHHHHHCCCCEEEEEEC
T ss_conf ----9999989-99999997627969999922