HHsearch alignment for GI: 254780582 and conserved domain: TIGR03587

>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme
Probab=97.20  E-value=0.003  Score=38.60  Aligned_cols=127  Identities=17%  Similarity=0.133  Sum_probs=76.6

Q ss_pred             HHHHHHCCHHHHHHHH------HH---HHHHHHHCCCC-CCCEEEEECCCCCHHHHHHHC---CCCEEEEEECHHHHHHH
Q ss_conf             9999612889899999------99---99999750104-897599965388111355312---38748873058999832
Q gi|254780582|r    7 ELRQFYSSFLGKCTTD------AI---SKVLSTTWDDV-TGCRLLGLGYAIPFFSCFHGK---VERTLAFMPAGQGATNW   73 (242)
Q Consensus         7 ~l~~wY~s~~G~~~~~------~~---~~~l~~~l~~~-~g~~vLdiGcg~g~~~~~~~~---~~~~~~~~~~~~~~~~~   73 (242)
T Consensus         4 eQE~FWageFG~~Yi~RN~~~~~~~sn~~~f~~~l~~~~~ikSilE~GcNIGlNL~ALk~L~P~~~l~gIEIN~~A~~~l   83 (204)
T TIGR03587         4 EQEQFWAGEFGKEYIDRNSRQSLVAAKLAMFARALNRLPKIASILELGANIGMNLAALKRLLPFKHIYGVEINEYAVEKA   83 (204)
T ss_pred             HHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHH
T ss_conf             47777503336687772773477888999999998357888826896688477699998748744049995399999999


Q ss_pred             HHCCCCCE-EEECHHHCCCCCCCCCCHHHHHHHHHHCCHHHH---HHHHHHHCCCCCEEEEEECCCC
Q ss_conf             31168623-653336567754720200220247752299999---9999984699988999733877
Q gi|254780582|r   74 PDQYFSST-ALVSEGNLPLADSSVDCVLMVHYLEFAEDPFLM---LHEIWRVLTSGGRMIVVVPNKR  136 (242)
Q Consensus        74 ~~~~~~~~-~~~d~~~LPf~~~sfD~Vi~~h~LE~~~dp~~~---L~Ei~RvLkPgG~lii~~~n~~  136 (242)
T Consensus        84 k~~~~~~~i~n~SIld-~~~~~~~DLv~t~GVLIHi-nP~~L~~vy~~l~~~s~ky-ili~EYynp~  147 (204)
T TIGR03587        84 KAYLPNINIIQGSLFD-PFKDNFFDLVLTKGVLIHI-NPDNLPTAYRELYRCSNRY-ILIAEYYNPS  147 (204)
T ss_pred             HHHCCCCEEEECCCCC-CCCCCCEEEEEEEEEEEEE-CHHHHHHHHHHHHHHHCCE-EEEEEECCCC
T ss_conf             8658972699653346-6778742389983089997-8899999999999852055-9999942899