HHsearch alignment for GI: 254780582 and conserved domain: TIGR03587
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme
Probab=97.20 E-value=0.003 Score=38.60 Aligned_cols=127 Identities=17% Similarity=0.133 Sum_probs=76.6
Q ss_pred HHHHHHCCHHHHHHHH------HH---HHHHHHHCCCC-CCCEEEEECCCCCHHHHHHHC---CCCEEEEEECHHHHHHH
Q ss_conf 9999612889899999------99---99999750104-897599965388111355312---38748873058999832
Q gi|254780582|r 7 ELRQFYSSFLGKCTTD------AI---SKVLSTTWDDV-TGCRLLGLGYAIPFFSCFHGK---VERTLAFMPAGQGATNW 73 (242)
Q Consensus 7 ~l~~wY~s~~G~~~~~------~~---~~~l~~~l~~~-~g~~vLdiGcg~g~~~~~~~~---~~~~~~~~~~~~~~~~~ 73 (242)
T Consensus 4 eQE~FWageFG~~Yi~RN~~~~~~~sn~~~f~~~l~~~~~ikSilE~GcNIGlNL~ALk~L~P~~~l~gIEIN~~A~~~l 83 (204)
T TIGR03587 4 EQEQFWAGEFGKEYIDRNSRQSLVAAKLAMFARALNRLPKIASILELGANIGMNLAALKRLLPFKHIYGVEINEYAVEKA 83 (204)
T ss_pred HHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHH
T ss_conf 47777503336687772773477888999999998357888826896688477699998748744049995399999999
Q ss_pred HHCCCCCE-EEECHHHCCCCCCCCCCHHHHHHHHHHCCHHHH---HHHHHHHCCCCCEEEEEECCCC
Q ss_conf 31168623-653336567754720200220247752299999---9999984699988999733877
Q gi|254780582|r 74 PDQYFSST-ALVSEGNLPLADSSVDCVLMVHYLEFAEDPFLM---LHEIWRVLTSGGRMIVVVPNKR 136 (242)
Q Consensus 74 ~~~~~~~~-~~~d~~~LPf~~~sfD~Vi~~h~LE~~~dp~~~---L~Ei~RvLkPgG~lii~~~n~~ 136 (242)
T Consensus 84 k~~~~~~~i~n~SIld-~~~~~~~DLv~t~GVLIHi-nP~~L~~vy~~l~~~s~ky-ili~EYynp~ 147 (204)
T TIGR03587 84 KAYLPNINIIQGSLFD-PFKDNFFDLVLTKGVLIHI-NPDNLPTAYRELYRCSNRY-ILIAEYYNPS 147 (204)
T ss_pred HHHCCCCEEEECCCCC-CCCCCCEEEEEEEEEEEEE-CHHHHHHHHHHHHHHHCCE-EEEEEECCCC
T ss_conf 8658972699653346-6778742389983089997-8899999999999852055-9999942899