HHsearch alignment for GI: 254780582 and conserved domain: pfam01269

>pfam01269 Fibrillarin Fibrillarin.
Probab=97.03  E-value=0.0029  Score=38.66  Aligned_cols=153  Identities=14%  Similarity=0.078  Sum_probs=87.9

Q ss_pred             HHHHH--HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHC----CCCEEEEEECHHHH---HHHH-HC
Q ss_conf             99996--128898999999999999750104897599965388111355312----38748873058999---8323-11
Q gi|254780582|r    7 ELRQF--YSSFLGKCTTDAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGK----VERTLAFMPAGQGA---TNWP-DQ   76 (242)
Q Consensus         7 ~l~~w--Y~s~~G~~~~~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~----~~~~~~~~~~~~~~---~~~~-~~   76 (242)
T Consensus        47 EyR~W~P~RSKLaAail~----g~~~-~~i~~gskVLYLGAasGTTVSHvsDIvg~~G~VyAVE~spr~~RdL~~la~~R  121 (229)
T pfam01269        47 EYRVWNPFRSKLAAAILK----GLDD-IPIKPGSKVLYLGAASGTTVSHVSDIVGPEGVVYAVEFSPRVGRELINVAKKR  121 (229)
T ss_pred             EEEEECCCCCHHHHHHHC----CCCC-CCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCC
T ss_conf             788878870188999975----8755-68589987999447779857678872288953999971735578999997427


Q ss_pred             CCCCEEEECHH---HCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCC
Q ss_conf             68623653336---567754720200220247752299999999998469998899973387740345653276656557
Q gi|254780582|r   77 YFSSTALVSEG---NLPLADSSVDCVLMVHYLEFAEDPFLMLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGSGQPY  153 (242)
Q Consensus        77 ~~~~~~~~d~~---~LPf~~~sfD~Vi~~h~LE~~~dp~~~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~~r~~  153 (242)
T Consensus       122 ~NIvPIl~DAr~P~~Y~~lv~~VD~ifqDva--Q~~Qa~i~~~Na~~FLk~gG~~~l~iKA~Sid~t~~p~--------~  191 (229)
T pfam01269       122 PNIVPILEDARHPQKYRMLVEMVDVIFADVA--QPDQARILALNAKYFLKNGGYFMISIKARSIDVTKEPE--------E  191 (229)
T ss_pred             CCCEEEECCCCCHHHHHHHCCCCCEEEECCC--CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHH--------H
T ss_conf             9944576677875676542556668996278--77789999999998612698899999713421678989--------9


Q ss_pred             CHHHHHHHHHHCCCCCEEEEE
Q ss_conf             888999999962876212578
Q gi|254780582|r  154 SWYQMISLLREANFTLSITSR  174 (242)
Q Consensus       154 ~~~~l~~~l~~~gf~~~~~~~  174 (242)
T Consensus       192 vf~~e~~~L~~~~~~~~e~i~  212 (229)
T pfam01269       192 VFAREVEKLKEEGFKPKEQVT  212 (229)
T ss_pred             HHHHHHHHHHHCCCCEEEEEC
T ss_conf             999999999876996589980