>pfam02384 N6_Mtase N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.

Probab=95.62 E-value=0.073 Score=30.72 Aligned_cols=133 Identities=17% Similarity=0.080 Sum_probs=74.3 Q ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHC----------CCCEEEEEECHHHHHHHH-----H---CCCCCEEE Q ss_conf 99999999750104897599965388111355312----------387488730589998323-----1---16862365 Q gi|254780582|r 22 DAISKVLSTTWDDVTGCRLLGLGYAIPFFSCFHGK----------VERTLAFMPAGQGATNWP-----D---QYFSSTAL 83 (242) Q Consensus 22 ~~~~~~l~~~l~~~~g~~vLdiGcg~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~ 83 (242) T Consensus 32 r~Vv~lmv~ll~p~~~~~V~DPacGtGgfLi~a~~~i~~~~~~~~~~~i~G~E~~~~~~~la~mNm~lhgi~~~~~~i~~ 111 (312) T pfam02384 32 REVSKLIVELLEPKPGESIYDPACGSGGFLIQADKFVKSHDGDTNDISIYGQELNPTTYRLARMNMILHGIEYNDFGIRH 111 (312) T ss_pred HHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 89999999982899999882168773378999999999843785565563688998999999999998479887455214 Q ss_pred ECHHHCCC--CCCCCCCHHHHHHHH--------HHCC--------------HHHHHHHHHHHCCCCCEEEEEECCCCCCH Q ss_conf 33365677--547202002202477--------5229--------------99999999984699988999733877403 Q gi|254780582|r 84 VSEGNLPL--ADSSVDCVLMVHYLE--------FAED--------------PFLMLHEIWRVLTSGGRMIVVVPNKRGMW 139 (242) Q Consensus 84 ~d~~~LPf--~~~sfD~Vi~~h~LE--------~~~d--------------p~~~L~Ei~RvLkPgG~lii~~~n~~s~w 139 (242) T Consensus 112 gdsl~~~~~~~~~kfD~IlsNPPFg~k~~~~~~~~~~~~~~~~~~~~~~~~e~~Fiqh~l~~Lk~~GraaiVlp~g~-Lf 190 (312) T pfam02384 112 GDTLLSPKFEEDKKFDVVVANPPFNQKWDANDNLENDPRFRAYGVPPKSNADFAFLQHIIYHLSPNGRAAVVLPNGV-LF 190 (312) T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC-CC T ss_conf 77655767665455118983786466766543210272110368788874429999999985699976999955823-10 Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHCC Q ss_conf 456532766565578889999999628 Q gi|254780582|r 140 ARMEHTPFGSGQPYSWYQMISLLREAN 166 (242) Q Consensus 140 ~~~~~~~~~~~r~~~~~~l~~~l~~~g 166 (242) T Consensus 191 ---~~------~--~e~~iR~~lle~~ 206 (312) T pfam02384 191 ---RG------G--AEGDIRKALVEKD 206 (312) T ss_pred ---CC------C--HHHHHHHHHHHCC T ss_conf ---46------5--0889999999759

HHsearch alignment for GI: 254780582 and conserved domain: pfam02384