HHsearch alignment for GI: 254780582 and conserved domain: pfam03141
>pfam03141 DUF248 Putative methyltransferase. Members of this family of hypothetical plant proteins are probably methyltransferases: several of the aligned sequences either match the methyltransferase profile, or contain a SAM-binding motif. A protein from Arabidopsis thaliana contains both. Several family members are described as ankyrin like.
Probab=98.85 E-value=5.7e-10 Score=76.98 Aligned_cols=152 Identities=18% Similarity=0.282 Sum_probs=88.2
Q ss_pred HHHHHHCCCC----CCCEEEEECCCCCHHHHHHHCC-CCEEEEEE--CHHHHHHHHHCCC--CCEEEECHHHCCCCCCCC
Q ss_conf 9999750104----8975999653881113553123-87488730--5899983231168--623653336567754720
Q gi|254780582|r 26 KVLSTTWDDV----TGCRLLGLGYAIPFFSCFHGKV-ERTLAFMP--AGQGATNWPDQYF--SSTALVSEGNLPLADSSV 96 (242)
Q Consensus 26 ~~l~~~l~~~----~g~~vLdiGcg~g~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~--~~~~~~d~~~LPf~~~sf 96 (242)
T Consensus 103 d~i~~~ip~~~~~~~vRt~LDvGCGVASfGayLl~r~vltMS~AP~D~HeaQVQfALERGiPA~igvlgT~rLPyPs~sF 182 (506)
T pfam03141 103 DFLAQVIPLIAWGGRVRTALDVGCGVASFGAYLLSRDVLTMSFAPKDVHEAQVQFALERGVPAMLGVLGTRRLPYPSRSF 182 (506)
T ss_pred HHHHHHCCCCCCCCCEEEEEECCCCEECHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
T ss_conf 99998567555798568999768872103777632784588734764118889999971852566564035358875330
Q ss_pred CCHHHHHHH-HHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEE--E
Q ss_conf 200220247-7522999999999984699988999733877403456532766565578889999999628762125--7
Q gi|254780582|r 97 DCVLMVHYL-EFAEDPFLMLHEIWRVLTSGGRMIVVVPNKRGMWARMEHTPFGSGQPYSWYQMISLLREANFTLSIT--S 173 (242)
Q Consensus 97 D~Vi~~h~L-E~~~dp~~~L~Ei~RvLkPgG~lii~~~n~~s~w~~~~~~~~~~~r~~~~~~l~~~l~~~gf~~~~~--~ 173 (242)
T Consensus 183 Dm~HCsRC~IpW~~~dG~~LlEvdRvLRPGGYfV~S~pPv~--~-~~~~-----~~~~~~~~~~~l~~~mCW~~v~~~~~ 254 (506)
T pfam03141 183 DMAHCSRCLIPWHANDGILLLEVDRVLRPGGYFVLSGPPVY--A-RDEE-----DLQEEWKAMEALAKSLCWKLVAKKGD 254 (506)
T ss_pred CHHHHCCCCCCCCCCCCEEEEEEEHCCCCCCEEEECCCCCC--C-CCHH-----HHHHHHHHHHHHHHHHHHHEEEEECC
T ss_conf 12442245674104797788654000047866994678655--6-6646-----68999999999999855302677588
Q ss_pred EEEEECCCCCHH
Q ss_conf 898308655246
Q gi|254780582|r 174 RSLFFPPTHKKC 185 (242)
Q Consensus 174 ~~~~~pp~~~~~ 185 (242)
T Consensus 255 ~aIwqKp~~~~C 266 (506)
T pfam03141 255 IAIWQKPVNNSC 266 (506)
T ss_pred EEEEECCCCHHH
T ss_conf 899978798478