HHsearch alignment for GI: 254780583 and conserved domain: PRK00055

Probab=99.11  E-value=1.2e-10  Score=89.72  Aligned_cols=117  Identities=23%  Similarity=0.255  Sum_probs=80.3

Q ss_pred             EEEEEEECCCCEEEEECCCCHHHHHHHHHHCCC---CEEEEEECCCCHHHHCHHHHHHHH-------CCCEEEECCCCCC
Q ss_conf             269999889984999869998999999998599---643999858984330000011110-------0010120001234
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAPDTYIISKMLREKGW---FLTHIFNTHHHIDHTRANLNLKKF-------FNCTIFGPLEESS   84 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~---~i~~Il~TH~H~DHigg~~~l~~~-------~~~~v~~~~~~~~   84 (256)
T Consensus        21 s~~li~~~--~~~iliD~G~G~--~~~l~~~~~~~~~l~~I~iTH~H~DH~~Gl~~ll~~~~~~~~~~~l~i~gp~~~~~   96 (259)
T PRK00055         21 SSILLRLG--GELWLFDCGEGT--QRQMLRAGIGPRKIDRIFITHLHGDHIFGLPGLLSTRSLSGRTEPLTIYGPKGIKE   96 (259)
T ss_pred             CEEEEEEC--CEEEEEECCCHH--HHHHHHCCCCHHHCCEEEEECCCHHHHCHHHHHHHHHHHCCCCCCEEEEECHHHHH
T ss_conf             88999999--908999588159--99999819995576589996433576652899999987459997169991778999


Q ss_pred             CCC--------CCC--------EEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC--CCCCCCCEEE
Q ss_conf             323--------322--------033101001111222331025544567522686146--5431377043
Q gi|254780583|r   85 KIP--------GID--------HGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMND--HFLCVGDTLF  136 (256)
Q Consensus        85 ~i~--------~~~--------~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~--~~lFtGDtLF  136 (256)
T Consensus        97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-H~~~s~Gyri~~~g~~i~ysgDt~~  165 (259)
T PRK00055         97 FVETLLRASGSHLPYRIAIHEIDEKTEGVVFDDDGFTVTAFPLD-HSIPCLGYRFEEKGRKIAYVGDTRP  165 (259)
T ss_pred             HHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCEEEEEEECC-CCCCEEEEEEEECCCEEEEECCCCC
T ss_conf             99999885066889725676325798732896499899999867-9986279999968816999527886