HHsearch alignment for GI: 254780583 and conserved domain: PRK05184
>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional.
Probab=98.57 E-value=6.5e-07 Score=65.50 Aligned_cols=125 Identities=15% Similarity=0.218 Sum_probs=70.8
Q ss_pred EEEEEECCCCEEEEECCC-CHH-HHHHH--HH-HCC---CCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC-
Q ss_conf 699998899849998699-989-99999--99-859---9643999858984330000011110001012000123432-
Q gi|254780583|r 16 CILIHNHKYRLTAAIDAP-DTY-IISKM--LR-EKG---WFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI- 86 (256)
Q Consensus 16 ~YlI~d~~t~~~viIDpg-d~~-~i~~~--l~-~~~---~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i- 86 (256)
T Consensus 41 Si~v-~~dg~~~~LiDasPDlr~QL~~~~~l~p~~~~r~s~i~~V~lTHaH~dH~~GL~~LRe~~~i~vya~~~~~~~L~ 119 (302)
T PRK05184 41 SIAV-SADGEDWVLVNASPDIRQQIRATPALQPARGLRDTPIAAVVLTDGQIDHVTGLLSLREGQPFPLYATPMVLEDLS 119 (302)
T ss_pred EEEE-ECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHCCHHHHHCCCCCCEEECHHHHHHHH
T ss_conf 8999-828986999989938999986514417543445787348998657500331788871569720674689999998
Q ss_pred ---C---------CCC-EEEEEHHCCCC---CCCCCCCCCCCCCCC------------CCCEEEECCCCCCCCCCEEEEC
Q ss_conf ---3---------322-03310100111---122233102554456------------7522686146543137704304
Q gi|254780583|r 87 ---P---------GID-HGLSDGDTFDF---GSHPIKIIATPGHTI------------GHICYHFMNDHFLCVGDTLFSL 138 (256)
Q Consensus 87 ---~---------~~~-~~l~dgd~i~i---g~~~~~vi~tPGHT~------------g~i~~~~~~~~~lFtGDtLF~~ 138 (256)
T Consensus 120 ~~~p~~~~l~~~~~v~~~~i~~~~~~~~~~~~gl~v~p~~Vp~k~p~~~~h~~~~~~~etvG~~i~~~~~--gk~~~Yip 197 (302)
T PRK05184 120 TGFPIFNVLDHYCGVDRRPIALDGPFAVPGLPGLRFTAFPVPSKAPPYSPHRGDPHPGDNIGLRIEDTAT--GRRLFYAP 197 (302)
T ss_pred HCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCC--CEEEEEEC
T ss_conf 6398878533346621024146886234787981899986488777654445678768468999972788--71799944
Q ss_pred CCCCC
Q ss_conf 61344
Q gi|254780583|r 139 GCGRI 143 (256)
Q Consensus 139 g~Gr~ 143 (256)
T Consensus 198 D~~~~ 202 (302)
T PRK05184 198 GLAEV 202 (302)
T ss_pred CCCCC
T ss_conf 85656