HHsearch results for GI: 254780583 and protein with PDBid: 2i7t_A
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.24 E-value=3e-12 Score=98.66 Aligned_cols=129 Identities=14% Similarity=0.124 Sum_probs=84.3
Q ss_pred CEE-EEEEECC---CEEEEEEECCCCEEEEECCCC-----HHHHHHHHHHCC-CCEEEEEECCCCHHHHCHHHHHHHH--
Q ss_conf 145-3011057---626999988998499986999-----899999999859-9643999858984330000011110--
Q gi|254780583|r 4 LNI-AISLYHD---NFCILIHNHKYRLTAAIDAPD-----TYIISKMLREKG-WFLTHIFNTHHHIDHTRANLNLKKF-- 71 (256)
Q Consensus 4 ~~i-~ip~~~D---Ny~YlI~d~~t~~~viIDpgd-----~~~i~~~l~~~~-~~i~~Il~TH~H~DHigg~~~l~~~-- 71 (256)
|.| |+.-... | +|+|..+ +..++||.|- .......+.... -++++|++||.|.||+||++.|...
T Consensus 12 ~~i~~LGG~~eiG~s-c~lv~~~--~~~illDcG~~~~~~~~~~~p~~~~~~~~~idai~lTH~H~DH~g~Lp~l~~~~~ 88 (459)
T 2i7t_A 12 LLIRPLGAGQEVGRS-CIILEFK--GRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTS 88 (459)
T ss_dssp EEEEEEESSSSSSSC-EEEEEET--TEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSS
T ss_pred EEEEECCCCCCCCCC-EEEEEEC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHCC
T ss_conf 999982689864568-9999989--9299995889988652002677666782229999989785887692799998648
Q ss_pred CCCEEEECCCCCCCCC----------------------------CCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 0010120001234323----------------------------322033101001111222331025544567522686
Q gi|254780583|r 72 FNCTIFGPLEESSKIP----------------------------GIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHF 123 (256)
Q Consensus 72 ~~~~v~~~~~~~~~i~----------------------------~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~ 123 (256)
++++||++......+. .....+.-++...+++..++++.+ ||++|+..+.+
T Consensus 89 ~~~piy~t~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~a-gH~~g~~~~~i 167 (459)
T 2i7t_A 89 FKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHA-GHVLGAAMFMI 167 (459)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEEC-CSSTTCEEEEE
T ss_pred CCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEECCCCEEEECCEEEEEEEC-CCCCCCEEEEE
T ss_conf 99988831527999998889877541034323567799999776245870799568608759999844-77678579999
Q ss_pred C--CCCCCCCCCEEE
Q ss_conf 1--465431377043
Q gi|254780583|r 124 M--NDHFLCVGDTLF 136 (256)
Q Consensus 124 ~--~~~~lFtGDtLF 136 (256)
+ +..+++|||+=+
T Consensus 168 ~~~~~~i~ytGD~~~ 182 (459)
T 2i7t_A 168 EIAGVKLLYTGDFSR 182 (459)
T ss_dssp EETTEEEEECCSCCC
T ss_pred EECCEEEEECCCCCC
T ss_conf 989998885588677