HHsearch results for GI: 254780583 and protein with PDBid: 2q9u_A
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.92 E-value=4.1e-25 Score=182.05 Aligned_cols=157 Identities=18% Similarity=0.094 Sum_probs=120.7
Q ss_pred CEEEEEEECCCCEEEEECCCC---HHHHHHHHHHC-C-CCEEEEEECCCCHHHHCHHHHHHHH-CCCEEEECCCCCCCC-
Q ss_conf 626999988998499986999---89999999985-9-9643999858984330000011110-001012000123432-
Q gi|254780583|r 14 NFCILIHNHKYRLTAAIDAPD---TYIISKMLREK-G-WFLTHIFNTHHHIDHTRANLNLKKF-FNCTIFGPLEESSKI- 86 (256)
Q Consensus 14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~-~-~~i~~Il~TH~H~DHigg~~~l~~~-~~~~v~~~~~~~~~i- 86 (256)
| +|||.++ +.++||||. .+.+++.+++. + -+|++|++||.|+||+||+..|.+. ++++|+++......+
T Consensus 42 N-sYLI~~e---~~vLIDtg~~~~~~~~l~~i~~~i~~~~I~~II~TH~H~DH~ggl~~l~~~~p~a~i~~~~~~~~~~~ 117 (414)
T 2q9u_A 42 N-SYFIDDE---CPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLK 117 (414)
T ss_dssp C-CEEECSS---SCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHH
T ss_pred E-EEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf 9-9999669---88999099801699999999975698779989969096647602999998788987997589998888
Q ss_pred ------CCCCEEEEEHHCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCCEEEECCC-CCCC--CCC---------
Q ss_conf ------33220331010011112223310255-4456752268614654313770430461-3446--663---------
Q gi|254780583|r 87 ------PGIDHGLSDGDTFDFGSHPIKIIATP-GHTIGHICYHFMNDHFLCVGDTLFSLGC-GRIF--EDS--------- 147 (256)
Q Consensus 87 ------~~~~~~l~dgd~i~ig~~~~~vi~tP-GHT~g~i~~~~~~~~~lFtGDtLF~~g~-Gr~~--~G~--------- 147 (256)
......+++|+.+.+|+.+++++++| |||+|++++|.+++++|||||.+...++ +..| +.+
T Consensus 118 ~~~~~~~~~~~~~~~g~~l~lg~~~l~~i~~p~gH~~~~~~~y~~~~~iLfsGD~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (414)
T 2q9u_A 118 ILYGMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDKILFSNDGFGQHYATSRRWADECDVSHVMHLFK 197 (414)
T ss_dssp HHHCCTTCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHH
T ss_pred HHCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 74389865258715898897565589997036898689789999898968945745667888767653234266799999
Q ss_pred ----------HHHHHHHHHHHHCCCCCCEEECCCCCHH
Q ss_conf ----------1567766544201344650201665204
Q gi|254780583|r 148 ----------YAEMFESLEKIKSFSDKTHIYFGHEYTE 175 (256)
Q Consensus 148 ----------~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~ 175 (256)
..++.+||+||..|+.+ .|+|||-...
T Consensus 198 ~y~~~~~~p~~~~~~~~Lekl~~Ldi~-~I~PgHGpi~ 234 (414)
T 2q9u_A 198 EYTANILGLFSAQMRKALEVASTVEIK-YILSAHGVSW 234 (414)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHTSCCS-EEEESSSCBE
T ss_pred HHHHHHHCCCHHHHHHHHHHHHCCCCC-EEEECCCCEE
T ss_conf 998773022399999999997578978-9980896724