HHsearch results for GI: 254780583 and protein with PDBid: 3hnn_A
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=99.89 E-value=5.1e-23 Score=168.45 Aligned_cols=177 Identities=19% Similarity=0.189 Sum_probs=125.5
Q ss_pred CEEEEEEECCCCEEEEECCCCH---HHHHHHHHHCC--CCEEEEEECCCCHHHHCHHHHHHHH-CCCEEEECCCCCCCCC
Q ss_conf 6269999889984999869998---99999999859--9643999858984330000011110-0010120001234323
Q gi|254780583|r 14 NFCILIHNHKYRLTAAIDAPDT---YIISKMLREKG--WFLTHIFNTHHHIDHTRANLNLKKF-FNCTIFGPLEESSKIP 87 (256)
Q Consensus 14 Ny~YlI~d~~t~~~viIDpgd~---~~i~~~l~~~~--~~i~~Il~TH~H~DHigg~~~l~~~-~~~~v~~~~~~~~~i~ 87 (256)
| +|||.++ ++++||||.. ..+++.+++.. -+|++|++||.|.||+||+..+++. ++++++++......+.
T Consensus 44 N-~YlI~~d---~~vLIDtG~~~~~~~~l~~~~~~~~~~~I~~IilTH~H~DH~Ggl~~~~~~~p~~~v~~~~~~~~~l~ 119 (262)
T 3hnn_A 44 N-SYVIEGD---KTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLR 119 (262)
T ss_dssp E-EEEEESS---SEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred E-EEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf 9-9999329---99999189755799999999963784258899959977777622599997444857997789998887
Q ss_pred -------CCCEEEEEHHCCCCC-CCCCCCCC-CCCCCCCCCEEEECCCCCCCCCCEEEECCCCC-CCC------------
Q ss_conf -------322033101001111-22233102-55445675226861465431377043046134-466------------
Q gi|254780583|r 88 -------GIDHGLSDGDTFDFG-SHPIKIIA-TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGR-IFE------------ 145 (256)
Q Consensus 88 -------~~~~~l~dgd~i~ig-~~~~~vi~-tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr-~~~------------ 145 (256)
.....+.+|+.+.++ +..+.++. .||||+||+++|.+++++|||||.++..+++- .+.
T Consensus 120 ~~~~~~~~~~~~~~~gd~~~~~~g~~l~~i~~~~~H~~~~~~~y~~~~~vLftgD~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (262)
T 3hnn_A 120 AAFPDDNLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYDVQTQILYTDKIFGAHICGDDVFDDNWESFKEDQRY 199 (262)
T ss_dssp HHSSSSCCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEETTTTEEEEETTTCCCCCCSCCEESCGGGTHHHHHH
T ss_pred HHHCCCCCCCCEECCCCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 65235664322002551476227823799966899989962999878886996663456778865506771678999999
Q ss_pred -------CCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf -------6315677665442013446502016652045889877502344789999999998885
Q gi|254780583|r 146 -------DSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRS 203 (256)
Q Consensus 146 -------G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~ 203 (256)
.+.+++.+||+||.+|+.+ .|+|||-.... ++-...+++|+.|++....
T Consensus 200 ~~~~~~~~~~~~~~~sL~~l~~L~~~-~I~PgHGpvi~--------~~~~~~le~Y~~w~~~~~~ 255 (262)
T 3hnn_A 200 YFNCLMAPHAIHVEAALEKISDLQVR-LYAVGHGPLVR--------TSLIALTQAYADWSKAQKL 255 (262)
T ss_dssp HHHHHTGGGHHHHHHHHHHHTTSCCS-EEEESSSSEES--------TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHCCCCC-EEECCCCCHHH--------CCHHHHHHHHHHHHHHHHH
T ss_conf 99985052499999999998789989-99957982453--------6999999999999877666