Query         gi|254780583|ref|YP_003064996.1| glyoxalase II [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 256
No_of_seqs    247 out of 4935
Neff          6.6 
Searched_HMMs 23785
Date          Tue May 31 20:06:39 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780583.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1xm8_A Glyoxalase II; structur 100.0       0       0  555.5  23.7  252    4-255     1-254 (254)
  2 2qed_A Hydroxyacylglutathione  100.0       0       0  553.2  23.0  251    1-255     5-258 (258)
  3 1qh5_A Glyoxalase II, protein  100.0       0       0  540.8  23.0  249    4-256     1-256 (260)
  4 2p18_A Glyoxalase II; metallop 100.0       0       0  502.9  22.4  251    1-253    26-311 (311)
  5 2gcu_A Putative hydroxyacylglu 100.0       0       0  386.4  12.2  213   13-227    14-239 (245)
  6 2xf4_A Hydroxyacylglutathione  100.0 1.4E-45       0  315.5  13.3  187    1-224     1-209 (210)
  7 2zwr_A Metallo-beta-lactamase  100.0 1.3E-38 5.5E-43  269.5  12.3  179    4-225     4-202 (207)
  8 2vw8_A PA1000, PQSE; quinolone 100.0 2.4E-29   1E-33  209.4  15.2  191   13-205    24-257 (303)
  9 2zo4_A Metallo-beta-lactamase  100.0 3.8E-29 1.6E-33  208.2  14.9  170    4-178    11-240 (317)
 10 1jjt_A IMP-1 metallo beta-lact 100.0 1.3E-28 5.3E-33  204.8  12.4  165   16-183    35-209 (228)
 11 1k07_A FEZ-1 beta-lactamase; m 100.0   1E-27 4.2E-32  198.9  14.7  155   15-172    26-216 (263)
 12 1a7t_A Metallo-beta-lactamase; 100.0 9.4E-28 3.9E-32  199.1  12.9  154   16-172    39-207 (232)
 13 2gmn_A Metallo-beta-lactamase; 100.0   6E-28 2.5E-32  200.4  11.5  154   16-172    37-223 (274)
 14 3l6n_A Metallo-beta-lactamase;  99.9 1.4E-27 5.7E-32  198.1  12.0  170   16-199    33-217 (219)
 15 1m2x_A Class B carbapenemase B  99.9 1.6E-26 6.6E-31  191.2  14.2  155   16-173    29-198 (223)
 16 2whg_A VIM-4 metallo-beta-lact  99.9 1.3E-26 5.5E-31  191.7  12.1  155   13-172    38-210 (230)
 17 1sml_A Protein (penicillinase)  99.9 8.8E-26 3.7E-30  186.4  12.4  184   16-203    40-258 (269)
 18 2yz3_A Metallo-beta-lactamase;  99.9 8.7E-26 3.7E-30  186.4  11.1  152   16-172    71-241 (266)
 19 3iog_A Beta-lactamase; hydrola  99.9 3.4E-25 1.4E-29  182.5  12.3  154   16-173    25-206 (227)
 20 1mqo_A Beta-lactamase II; alph  99.9 2.5E-25 1.1E-29  183.4  10.3  155   14-172    42-211 (227)
 21 2fhx_A SPM-1; metallo-beta-lac  99.9   6E-25 2.5E-29  181.0  12.0  155   16-173    32-223 (246)
 22 3adr_A Putative uncharacterize  99.9 2.9E-26 1.2E-30  189.5   5.2  155   11-172    17-208 (261)
 23 2p97_A Hypothetical protein; p  99.9 7.9E-25 3.3E-29  180.2  11.4  150   15-173    25-183 (201)
 24 2q9u_A A-type flavoprotein; fl  99.9 4.1E-25 1.7E-29  182.0   8.7  157   14-175    42-234 (414)
 25 2ohh_A Type A flavoprotein FPR  99.9 1.9E-24 8.2E-29  177.6   9.9  174   14-199    36-252 (404)
 26 1ycg_A Nitric oxide reductase;  99.9 2.4E-24   1E-28  177.1   9.7  158   14-175    37-231 (398)
 27 1vme_A Flavoprotein; TM0755, s  99.9   5E-24 2.1E-28  175.0   8.6  155   14-174    53-243 (410)
 28 3dha_A N-acyl homoserine lacto  99.9 8.9E-24 3.7E-28  173.4   9.6  152   15-173    40-241 (254)
 29 3hnn_A Putative diflavin flavo  99.9 5.1E-23 2.2E-27  168.4  10.3  177   14-203    44-255 (262)
 30 2cfu_A SDSA1; SDS-hydrolase, l  99.9 4.3E-22 1.8E-26  162.4  14.8  206   14-225   124-403 (658)
 31 1e5d_A Rubredoxin\:oxygen oxid  99.9 3.1E-23 1.3E-27  169.8   7.9  156   14-174    36-229 (402)
 32 3esh_A Protein similar to meta  99.8 2.7E-21 1.1E-25  157.3   7.6  154   15-173    49-253 (280)
 33 2r2d_A AGR_PTI_140P, Zn-depend  99.8 2.6E-20 1.1E-24  150.9   8.7  154   15-173    44-261 (276)
 34 1p9e_A Methyl parathion hydrol  99.8 1.8E-20 7.7E-25  151.9   6.7  156   14-172    98-303 (331)
 35 1ztc_A Hypothetical protein TM  99.8 1.1E-19 4.7E-24  146.8  10.7  148   16-172    37-212 (221)
 36 3bk2_A RNAse J, metal dependen  99.4 1.6E-13 6.8E-18  106.9   6.9  134    2-138    15-184 (562)
 37 2p4z_A Metal-dependent hydrola  99.4 3.5E-12 1.5E-16   98.3  11.3   64   16-81     35-102 (284)
 38 2bib_A CBPE, teichoic acid pho  99.3 1.8E-11 7.4E-16   93.7   9.7  160   16-189    20-249 (547)
 39 3af5_A Putative uncharacterize  99.3 1.7E-11 7.2E-16   93.8   8.4  130    3-136   188-370 (651)
 40 2i7t_A Cleavage and polyadenyl  99.2   3E-12 1.3E-16   98.7   3.8  129    4-136    12-182 (459)
 41 2az4_A Hypothetical protein EF  99.2 4.6E-12 1.9E-16   97.5   3.7  119   14-138    21-194 (429)
 42 1zkp_A Hypothetical protein BA  99.2 4.8E-11   2E-15   90.9   7.0  117   16-137    45-183 (268)
 43 3g1p_A Protein PHNP; C-P lyase  99.1 2.5E-10   1E-14   86.3   9.8  161   14-187    39-216 (258)
 44 2xr1_A Cleavage and polyadenyl  99.1 2.6E-11 1.1E-15   92.6   2.4  132    3-137   183-359 (640)
 45 2i7x_A Protein CFT2; polyadeny  99.0 2.8E-10 1.2E-14   86.0   6.2  117   15-134    16-180 (717)
 46 3kl7_A Putative metal-dependen  98.8 3.1E-09 1.3E-13   79.1   3.6  120   11-138    35-167 (235)
 47 3h3e_A Uncharacterized protein  98.7 5.8E-08 2.5E-12   70.9   8.0   51   15-71     33-84  (267)
 48 2cbn_A Ribonuclease Z; phospho  98.7 4.7E-08   2E-12   71.5   7.5   66   15-82     21-98  (306)
 49 3jxp_A Coenzyme PQQ synthesis   98.4 4.7E-07   2E-11   65.0   7.1   65   15-82     42-116 (321)
 50 1y44_A Ribonuclease Z; zinc-de  98.3   2E-06 8.3E-11   61.0   7.8   67   13-81     18-95  (320)
 51 2wyl_A L-ascorbate-6-phosphate  98.2 1.8E-06 7.8E-11   61.2   5.8   91   48-138   109-231 (360)
 52 3bv6_A Metal-dependent hydrola  98.1 7.8E-07 3.3E-11   63.6   1.8   92   48-139   133-257 (379)
 53 1vjn_A Zn-dependent hydrolase   98.0 4.3E-06 1.8E-10   58.8   4.6  102   11-137    18-127 (220)
 54 3md7_A Beta-lactamase-like; ss  97.9 2.5E-05 1.1E-09   53.8   6.4   58   12-70     61-121 (293)
 55 2e7y_A TRNAse Z; tRNA maturati  97.7 2.2E-05 9.4E-10   54.2   4.1   50   16-70     13-62  (280)
 56 2gcu_A Putative hydroxyacylglu  87.3    0.15 6.5E-06   29.3   1.2   25  211-235   191-215 (245)
 57 3olh_A MST, 3-mercaptopyruvate  78.9     2.4  0.0001   21.6   4.4   63  111-185   214-277 (302)
 58 1rhs_A Sulfur-substituted rhod  72.7     3.6 0.00015   20.4   4.0   63  111-185   200-263 (296)
 59 3aay_A Putative thiosulfate su  72.7     3.5 0.00015   20.5   3.9   61  111-183   186-247 (277)
 60 1uar_A Rhodanese; sulfurtransf  61.7     7.4 0.00031   18.4   3.8   60  112-183   194-254 (285)
 61 2ji4_A Phosphoribosyl pyrophos  60.1     6.5 0.00027   18.8   3.2   27    6-32     59-87  (379)
 62 2elf_A Protein translation elo  53.8     2.1   9E-05   21.9  -0.1   10   39-48    104-113 (370)
 63 3ijw_A Aminoglycoside N3-acety  48.5      14 0.00057   16.7   3.4   30   34-63     16-45  (268)
 64 3h2y_A GTPase family protein;   46.8      14 0.00061   16.5   3.9   98   40-143   124-266 (368)
 65 3dah_A Ribose-phosphate pyroph  46.1      15 0.00062   16.5   3.7   44    5-48     33-87  (319)
 66 1kid_A Groel (HSP60 class); ch  44.2     2.3 9.6E-05   21.7  -1.2   87  102-204    96-182 (203)
 67 3hzu_A Thiosulfate sulfurtrans  43.5      16 0.00068   16.2   4.0   59  112-183   222-280 (318)
 68 2h06_A Ribose-phosphate pyroph  41.5      17 0.00072   16.0   3.0   27    6-32     30-58  (326)
 69 1dku_A Protein (phosphoribosyl  39.7      18 0.00078   15.8   3.6   28    5-32     35-64  (317)
 70 2ewc_A Conserved hypothetical   38.8      11 0.00047   17.2   1.7   12  129-140    19-30  (126)
 71 2huo_A Inositol oxygenase; pro  37.6     6.6 0.00028   18.7   0.4   27  114-141   127-153 (289)
 72 3k0t_A Endoribonuclease L-PSP,  37.5      16 0.00068   16.2   2.3   46  109-158    23-75  (143)
 73 2nyg_A YOKD protein; PFAM02522  37.2      20 0.00085   15.6   3.4   30   34-63     14-43  (273)
 74 2jku_A Propionyl-COA carboxyla  35.5     9.5  0.0004   17.7   0.9   82   56-137     2-92  (94)
 75 3k12_A Uncharacterized protein  34.4      16 0.00068   16.2   1.9   13   38-50     46-58  (122)
 76 1w96_A ACC, acetyl-coenzyme A   32.5      24   0.001   15.1   2.8   12   36-47    120-131 (554)
 77 3gtz_A Putative translation in  31.2      20 0.00083   15.6   1.9   14   38-51     48-61  (124)
 78 2ibn_A Inositol oxygenase; red  31.0     7.2  0.0003   18.5  -0.3   27  114-141    88-114 (250)
 79 1e0c_A Rhodanese, sulfurtransf  30.6      26  0.0011   14.9   2.8   23  162-184   223-245 (271)
 80 1okg_A Possible 3-mercaptopyru  30.2      26  0.0011   14.8   4.5   65  111-184   198-268 (373)
 81 3lme_A Possible translation in  29.6      27  0.0011   14.8   2.5   12  128-139    22-33  (138)
 82 3k3s_A Altronate hydrolase; st  28.5      16 0.00069   16.2   1.1   77   55-142     4-85  (105)
 83 2nnz_A Hypothetical protein; b  28.3     9.4  0.0004   17.7  -0.1   52  115-166    93-147 (153)
 84 3ec1_A YQEH GTPase; atnos1, at  27.6      16 0.00067   16.2   1.0   99   39-143   125-267 (369)
 85 2c40_A Inosine-uridine preferr  27.6      29  0.0012   14.5   2.8   54   28-81      4-67  (312)
 86 3igz_B Cofactor-independent ph  27.2      23 0.00097   15.2   1.7   26   55-80    135-161 (561)
 87 2qtd_A Uncharacterized protein  26.6      30  0.0013   14.4   4.8   72    1-79      2-82  (105)
 88 2kb3_A Oxoglutarate dehydrogen  26.3      14  0.0006   16.6   0.5   16   93-108   122-137 (143)
 89 3glk_A Acetyl-COA carboxylase   26.2      31  0.0013   14.4   2.3   24   25-48     95-125 (540)
 90 2qu8_A Putative nucleolar GTP-  25.4      21  0.0009   15.4   1.3   61   55-116     4-88  (228)
 91 1sa3_A Type II restriction enz  24.9      32  0.0014   14.2   2.3   53  165-223   124-179 (262)
 92 1zx8_A Hypothetical protein TM  23.5      33  0.0014   14.2   1.9   24  115-138    74-98  (136)
 93 2bz1_A GTP cyclohydrolase II;   23.4      28  0.0012   14.7   1.5   68  101-173    15-93  (196)
 94 3f0d_A 2-C-methyl-D-erythritol  22.4      20 0.00085   15.6   0.7   62   55-123     2-66  (183)
 95 2h5e_A Peptide chain release f  22.2      19 0.00079   15.8   0.5   29   25-53    108-141 (529)
 96 1vem_A Beta-amylase; beta-alph  21.4      38  0.0016   13.8   3.2   30   35-64     68-97  (516)
 97 1x87_A Urocanase protein; stru  21.0      39  0.0016   13.7   3.4   26   36-61     61-95  (551)

No 1  
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=100.00  E-value=0  Score=555.52  Aligned_cols=252  Identities=40%  Similarity=0.687  Sum_probs=244.2

Q ss_pred             CEE-EEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCC
Q ss_conf             145-3011057626999988998499986999899999999859964399985898433000001111000101200012
Q gi|254780583|r    4 LNI-AISLYHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEE   82 (256)
Q Consensus         4 ~~i-~ip~~~DNy~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~   82 (256)
                      |.| +||+|+|||+|||.|+.|++|++||||++++++++++++++++++|++||+|+||++|+.+|++.++++++++..+
T Consensus         1 M~i~~ip~l~dNy~Yli~d~~t~~~~vIDp~~~~~vl~~l~~~~~~l~~Il~TH~H~DH~~g~~~l~~~~~~~i~~~~~~   80 (254)
T 1xm8_A            1 MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMD   80 (254)
T ss_dssp             CEEEEEEETTTEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGG
T ss_pred             CEEEEEEEECCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCC
T ss_conf             97899743425789999989999899998978299999999779916899944788655266899988639838973332


Q ss_pred             CCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             34323322033101001111222331025544567522686146543137704304613446663156776654420134
Q gi|254780583|r   83 SSKIPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSFS  162 (256)
Q Consensus        83 ~~~i~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl~~Lp  162 (256)
                      ...++++++.++||+.+++|+.+++|++|||||+||+|||++++++||||||||.+||||+|+|++++|++||+||++||
T Consensus        81 ~~~~~~~~~~~~dgd~i~~g~~~~~vi~tPGHT~ghv~~~~~~~~~lftGDtlf~~g~Gr~~~g~~~~~~~Sl~kl~~Lp  160 (254)
T 1xm8_A           81 KDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLP  160 (254)
T ss_dssp             GGGSTTEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEECCCSSSCHHHHHHHHHHHHTSC
T ss_pred             CCCCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCEEEEECCCCEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             24587898783489736788878999972798877568997575378856888745888889999999999999997089


Q ss_pred             CCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCC-CCH
Q ss_conf             4650201665204588987750234478999999999888578986678789998728224678989999738899-898
Q gi|254780583|r  163 DKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKKVNPFLRIENTSLRKNLNMEN-ASN  241 (256)
Q Consensus       163 ~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~~~tvPstl~~Ek~~NPflr~~~~~~~~~~~~~~-~~~  241 (256)
                      ++|+||||||||.+|++|+.+++|+|+.++++.++++++|+++.||+||||++||++|||||++++.+++.++... .++
T Consensus       161 ~~t~v~pgH~y~~~n~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~tvpstl~~E~~~Npflr~~~~~~~~~l~~~~~~~~  240 (254)
T 1xm8_A          161 DDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADE  240 (254)
T ss_dssp             TTCEEEESBCCHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCTTCHHHHHHHTCCTTCCH
T ss_pred             CCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCH
T ss_conf             65657225655433301254407876889999999999987799957753899987495467898899998589989998


Q ss_pred             HHHHHHHHHHHHCC
Q ss_conf             99999999867328
Q gi|254780583|r  242 LAVFTELRIRKNQS  255 (256)
Q Consensus       242 ~~~f~~lR~~kd~f  255 (256)
                      .++|.+||++||+|
T Consensus       241 ~~~f~~LR~~kd~f  254 (254)
T 1xm8_A          241 AEALGIIRKAKDDF  254 (254)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             99999999846689


No 2  
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- lactamase superfamily; 1.45A {Salmonella typhimurium LT2} SCOP: d.157.1.2
Probab=100.00  E-value=0  Score=553.20  Aligned_cols=251  Identities=36%  Similarity=0.567  Sum_probs=232.8

Q ss_pred             CCCCEE-EEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEEC
Q ss_conf             986145-3011057626999988998499986999899999999859964399985898433000001111000101200
Q gi|254780583|r    1 MTSLNI-AISLYHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGP   79 (256)
Q Consensus         1 m~~~~i-~ip~~~DNy~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~   79 (256)
                      |..|+| +||+|+|||+|||.++ +++|++||||++++++++++++++++++|++||+|+||++|+.++++.++++++.+
T Consensus         5 ~~~~~i~~iP~~~DNy~Yli~~~-~~~avvIDPg~~~~il~~l~~~~~~l~~Il~TH~H~DHi~g~~~l~~~~~~~~~~~   83 (258)
T 2qed_A            5 IGSMNLNSIPAFQDNYIWVLTND-EGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYG   83 (258)
T ss_dssp             --CCEEEEEEETTTEEEEEEECT-TSEEEEECCSCHHHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCTTCEEEE
T ss_pred             CCCCEEEEEEEECCEEEEEEEEC-CCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEC
T ss_conf             65777999600437589999938-97099986987599999999769905799937999876553355444320214521


Q ss_pred             CCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             01234323322033101001111222331025544567522686146543137704304613446663156776654420
Q gi|254780583|r   80 LEESSKIPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIK  159 (256)
Q Consensus        80 ~~~~~~i~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl~  159 (256)
                      .. ....+..++.++|||+|.+|+.+++|+||||||+||+||++  ++.||||||||+|||||+|+|++++||+||+||+
T Consensus        84 ~~-~~~~~~~~~~l~dgd~i~iG~~~~~vihTPGHT~g~v~~~~--~~~lFtGDtLF~gg~Gr~~~g~~~~m~~SL~kl~  160 (258)
T 2qed_A           84 PA-ETQDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYFS--RPYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKIN  160 (258)
T ss_dssp             CG-GGGGGTCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEE--TTEEEEETTEETTEECCCSSSCHHHHHHHHHHHH
T ss_pred             CC-CCCCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCEEEEE--CCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             54-33345541464058678768845799967899988667873--2405607813068878889989999999999997


Q ss_pred             CCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCC-
Q ss_conf             1344650201665204588987750234478999999999888578986678789998728224678989999738899-
Q gi|254780583|r  160 SFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKKVNPFLRIENTSLRKNLNMEN-  238 (256)
Q Consensus       160 ~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~~~tvPstl~~Ek~~NPflr~~~~~~~~~~~~~~-  238 (256)
                      +||++|+||||||||.+|++||++++|+|+.+++++++++++|+++.||+||||++||++|||||++++++++.++.+. 
T Consensus       161 ~L~~~t~vypgH~y~~~nl~f~~~~~p~n~~l~~~~~~~~~~~~~~~~t~Pstl~~Ek~~NpflR~~~~~~~~~~~~~~~  240 (258)
T 2qed_A          161 SLPDDTLICCAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKETI  240 (258)
T ss_dssp             TSCTTCEEEESBCCHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCTTCHHHHHHHHTTCC
T ss_pred             CCCCCCEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCHHHCCCCHHHHHHHHHCCC
T ss_conf             19931243467745545667798728886999999999999997599957723999976598547899899999863147


Q ss_pred             -CCHHHHHHHHHHHHHCC
Q ss_conf             -89899999999867328
Q gi|254780583|r  239 -ASNLAVFTELRIRKNQS  255 (256)
Q Consensus       239 -~~~~~~f~~lR~~kd~f  255 (256)
                       .++.++|++||+|||+|
T Consensus       241 ~~~~~~~f~~lR~~kd~f  258 (258)
T 2qed_A          241 LQQPEARFAWLRSKKDTF  258 (258)
T ss_dssp             CCSHHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCC
T ss_conf             899899999999855689


No 3  
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GTT GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=100.00  E-value=0  Score=540.81  Aligned_cols=249  Identities=30%  Similarity=0.481  Sum_probs=233.3

Q ss_pred             CEE-EEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCC
Q ss_conf             145-3011057626999988998499986999899999999859964399985898433000001111000101200012
Q gi|254780583|r    4 LNI-AISLYHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEE   82 (256)
Q Consensus         4 ~~i-~ip~~~DNy~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~   82 (256)
                      |+| +||+|+|||+|||.|+.|++|+|||||+++++++++++++++|++||+||+|+||++|+.+|++.+++.++.+...
T Consensus         1 m~i~~ip~l~DNysYli~d~~t~~a~vIDP~~~~~i~~~~~~~~l~l~~Il~TH~H~DHi~g~~~l~~~~~~~~~~~~~~   80 (260)
T 1qh5_A            1 MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDD   80 (260)
T ss_dssp             CEEEEEEETTTEEEEEEEETTTTEEEEESCSSHHHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCT
T ss_pred             CEEEEEEEECCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCHHHHCCHHHHHCCCCCCEECCCCC
T ss_conf             95789410342689999989999899990898899999999779968899947898567510443101157724413334


Q ss_pred             CCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC-----CCCCCCCEEEECCCCCCCCCCHHHHHHHH-H
Q ss_conf             34323322033101001111222331025544567522686146-----54313770430461344666315677665-4
Q gi|254780583|r   83 SSKIPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMND-----HFLCVGDTLFSLGCGRIFEDSYAEMFESL-E  156 (256)
Q Consensus        83 ~~~i~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~-----~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl-~  156 (256)
                        ..+..+..+.+|+.+.+|+.+++|+||||||+||+||+++++     +++|||||||+|||||+++|++++|++|+ +
T Consensus        81 --~~~~~~~~~~~gd~~~~g~~~~~vi~TPGHT~gsv~~~~~~~~~~~~~~lFtGDtLF~gg~Gr~~~g~~~~l~~si~~  158 (260)
T 1qh5_A           81 --RIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLE  158 (260)
T ss_dssp             --TSTTCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTEETTEECCCTTCCHHHHHHHHHT
T ss_pred             --CCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEECCCEECCCCCCCCCCCHHHHHHHHHH
T ss_conf             --565332236677389989999999984588888578998478887565178557443687668889998999899988


Q ss_pred             HHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCC
Q ss_conf             42013446502016652045889877502344789999999998885789866787899987282246789899997388
Q gi|254780583|r  157 KIKSFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKKVNPFLRIENTSLRKNLNM  236 (256)
Q Consensus       157 kl~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~~~tvPstl~~Ek~~NPflr~~~~~~~~~~~~  236 (256)
                      +|.+||++|+|||||||+.+|++|+.+++|+|+.++.++.+++.+++++.||+||||++||++|||||++++.++++++.
T Consensus       159 ~l~~Lpd~t~vypGH~y~~~n~~f~~~~~~~n~~l~~~~~~~~~~~~~~~~tvpstl~~E~~~NPflr~~~~~~~~~~~~  238 (260)
T 1qh5_A          159 VLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGE  238 (260)
T ss_dssp             TTTTSCTTCEEEESBCCHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCCCCCEEHHHHHHHCTTTTTTSHHHHHHHTC
T ss_pred             HHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCHHHHHHHCC
T ss_conf             98529976379526667655467798857468999999999998987799957720999976493014799899987379


Q ss_pred             CCCCHHHHHHHHHHHHHCCC
Q ss_conf             99898999999998673289
Q gi|254780583|r  237 ENASNLAVFTELRIRKNQSK  256 (256)
Q Consensus       237 ~~~~~~~~f~~lR~~kd~f~  256 (256)
                        .+++++|.+||++||+||
T Consensus       239 --~~~~~~f~~lR~~kd~f~  256 (260)
T 1qh5_A          239 --TDPVTTMRAVRREKDQFK  256 (260)
T ss_dssp             --SSHHHHHHHHHHHHHHCC
T ss_pred             --CCHHHHHHHHHHHHHCCC
T ss_conf             --987999999999861478


No 4  
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrolase; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=100.00  E-value=0  Score=502.89  Aligned_cols=251  Identities=27%  Similarity=0.424  Sum_probs=226.6

Q ss_pred             CCCCEE-EEEEECCCEEEEEEECCCCEEEEECCC-CHHHHHHHHHHC---------CCCEEEEEECCCCHHHHCHHHHHH
Q ss_conf             986145-301105762699998899849998699-989999999985---------996439998589843300000111
Q gi|254780583|r    1 MTSLNI-AISLYHDNFCILIHNHKYRLTAAIDAP-DTYIISKMLREK---------GWFLTHIFNTHHHIDHTRANLNLK   69 (256)
Q Consensus         1 m~~~~i-~ip~~~DNy~YlI~d~~t~~~viIDpg-d~~~i~~~l~~~---------~~~i~~Il~TH~H~DHigg~~~l~   69 (256)
                      |+.+.| +||+|+|||+|||.|+.|++|++|||| +++++++++++.         +++|++||+||+|+||++|+.+|+
T Consensus        26 ~~~~~v~~iP~l~DNysYLI~d~~t~ea~vIDPg~d~~~il~~i~~~~~~~~~~~~~l~l~~ILlTH~H~DHigG~~~L~  105 (311)
T 2p18_A           26 GSAFSVTVVPTLKDNFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLK  105 (311)
T ss_dssp             TTTEEEEEEEETTTEEEEEEEETTTTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHH
T ss_pred             CCCEEEEEEEECCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHH
T ss_conf             56208999500064289999989999799991898618999999998875311236976879982788872252499999


Q ss_pred             HHCCCEE-----EECCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCC------CCCCCCEEEEC
Q ss_conf             1000101-----200012343233220331010011112223310255445675226861465------43137704304
Q gi|254780583|r   70 KFFNCTI-----FGPLEESSKIPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDH------FLCVGDTLFSL  138 (256)
Q Consensus        70 ~~~~~~v-----~~~~~~~~~i~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~------~lFtGDtLF~~  138 (256)
                      +.+++..     ..........+.+++.+++|+.+.+|+.+++|++|||||+||+||++++++      ++|||||||.+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dgd~i~~G~~~l~vi~tPGHT~ghv~~~~~~~~~~~~~~~lFtGDtlF~g  185 (311)
T 2p18_A          106 AELEAMNSTVPVVVVGGANDSIPAVTKPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQHPNDGVALFTGDTMFIA  185 (311)
T ss_dssp             HHHHSCC--CCCEEEEEGGGTCTTCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECTTCGGGCEEEEEETTEETT
T ss_pred             HHHCCCCCCCCEEEECCHHCCCCCCCEEECCCCEEEECCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEECCEECCC
T ss_conf             98478532231034113110687784662489705799999999864455776369998467777646679989995247


Q ss_pred             CCCCCCCCCHHHHHHHHHHH--------HCCCCCCEEECCCCCHHHHHHHHHHCCCCCHH-----HHHHHHHHHHHHHCC
Q ss_conf             61344666315677665442--------01344650201665204588987750234478-----999999999888578
Q gi|254780583|r  139 GCGRIFEDSYAEMFESLEKI--------KSFSDKTHIYFGHEYTENNAYFALSCDPHNLE-----LQKYCSKVKSMRSQN  205 (256)
Q Consensus       139 g~Gr~~~G~~~~l~~Sl~kl--------~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~-----~~~~~~~~~~~~~~~  205 (256)
                      ||||+++|++.+|++||+||        .+||++|+||||||||.+||+||++++|+|+.     +..+.+++.+.+.++
T Consensus       186 g~Gr~~~g~~~~~~~SL~kl~~~~~~~l~~Lpd~t~IyPGH~y~~~nl~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  265 (311)
T 2p18_A          186 GIGAFFEGDEKDMCRAMEKVYHIHKGNDYALDKVTFIFPGHEYTSGFMTFSEKTFPDRASDDLAFIQAQRAKYAAAVKTG  265 (311)
T ss_dssp             EECCCTTSCHHHHHHHHHHHHTTTGGGTTGGGGGEEEEESBCCHHHHHHHHHHHCSCTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             77789997999999999999986541445799985999187232466667765078743357889999999999998769


Q ss_pred             CCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             986678789998728224678989999738899898999999998673
Q gi|254780583|r  206 LYTNPSTISLEKKVNPFLRIENTSLRKNLNMENASNLAVFTELRIRKN  253 (256)
Q Consensus       206 ~~tvPstl~~Ek~~NPflr~~~~~~~~~~~~~~~~~~~~f~~lR~~kd  253 (256)
                      .||+||||++||++|||||+++++++++++..+  +.+.|..||..||
T Consensus       266 ~pt~Pstl~~E~~~Npflr~~~~~~~~~l~~~~--~~~~~~~~~~~~~  311 (311)
T 2p18_A          266 DPSVPSSLAEEKRQNLFLRVADPAFVAKMNQGN--AHALMMYLYNACD  311 (311)
T ss_dssp             CCCCCEEHHHHHHHCTTGGGGSHHHHHHHTSSS--HHHHHHHHHHC--
T ss_pred             CCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCC--CHHHHHHHHHCCC
T ss_conf             998897599998749162789989999877999--4799999986369


No 5  
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=100.00  E-value=0  Score=386.36  Aligned_cols=213  Identities=26%  Similarity=0.299  Sum_probs=193.6

Q ss_pred             CCEEEEEEEC--CCCEEEEECCCC--HHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCCCC
Q ss_conf             7626999988--998499986999--899999999859964399985898433000001111000101200012343233
Q gi|254780583|r   13 DNFCILIHNH--KYRLTAAIDAPD--TYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKIPG   88 (256)
Q Consensus        13 DNy~YlI~d~--~t~~~viIDpgd--~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i~~   88 (256)
                      .||+|||.|.  .+++|+|||||+  ++.++++++++++++++|++||+|+||++|+.+|++++++.++.....  ....
T Consensus        14 ~~~sYli~d~~~~t~eaivIDP~~~~~~~~~~~i~~~~~~i~~Il~TH~H~DH~~g~~~l~~~~~~~~~~~~~~--~~~~   91 (245)
T 2gcu_A           14 STFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKA--SGSK   91 (245)
T ss_dssp             TEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGG--GCCC
T ss_pred             CEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC--CCCC
T ss_conf             30899998588899989999299875899999999869967899835897688713999997641541000124--6766


Q ss_pred             CCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECC------CCCCCCCCEEEECCCCC--CCCCCHHHHHHHHH-HHH
Q ss_conf             2203310100111122233102554456752268614------65431377043046134--46663156776654-420
Q gi|254780583|r   89 IDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMN------DHFLCVGDTLFSLGCGR--IFEDSYAEMFESLE-KIK  159 (256)
Q Consensus        89 ~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~------~~~lFtGDtLF~~g~Gr--~~~G~~~~l~~Sl~-kl~  159 (256)
                      .++.+++|+.+.+|+.++++++|||||+||+||++.+      .++||||||||.|||||  +++|++++|++||+ +|.
T Consensus        92 ~d~~~~dgd~~~iG~~~l~vi~TPGHT~gsv~~~~~d~~~~~~~~~lFtGDtLF~g~~Gr~d~~~g~~~~l~~sl~~~l~  171 (245)
T 2gcu_A           92 ADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQEGSSDQLYESVHSQIF  171 (245)
T ss_dssp             CSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETTSBTTBCCCCSSTTCCHHHHHHHHHHHTT
T ss_pred             CCEEECCCCCCEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             75661488721489899999977898863389994366777766379954760577563678898869999999986754


Q ss_pred             CCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCC
Q ss_conf             13446502016652045889877502344789999999998885789866787899987282246789
Q gi|254780583|r  160 SFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKKVNPFLRIEN  227 (256)
Q Consensus       160 ~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~~~tvPstl~~Ek~~NPflr~~~  227 (256)
                      +||++|+|||||+|+.+|+.|+....+.|+.+++..+++++.+.++.|++||+|+.|+++|+|+|..+
T Consensus       172 ~Lp~~t~i~pGH~~~~~~~tt~~~e~~~Np~l~~~~~~~~~~~~~~~~~~P~~l~~~~~~N~~~~~~~  239 (245)
T 2gcu_A          172 TLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPANMVCGLQD  239 (245)
T ss_dssp             TSCTTCEEEESBCSSSCCCEEHHHHHHHCTTTTSCHHHHHHHHHTCCCCCCTTHHHHHHHHHTTTCCS
T ss_pred             CCCCCEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf             59951799778788744443367565059999867999999997599698977899999788679999


No 6  
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=100.00  E-value=1.4e-45  Score=315.50  Aligned_cols=187  Identities=29%  Similarity=0.499  Sum_probs=168.5

Q ss_pred             CCCCEEEEEEECCCEEEEEEECCCCEEEEECCC-CHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEEC
Q ss_conf             986145301105762699998899849998699-9899999999859964399985898433000001111000101200
Q gi|254780583|r    1 MTSLNIAISLYHDNFCILIHNHKYRLTAAIDAP-DTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGP   79 (256)
Q Consensus         1 m~~~~i~ip~~~DNy~YlI~d~~t~~~viIDpg-d~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~   79 (256)
                      |..-.||++.|++| +|||.+++++++++|||| +++.+++++++.+++|++|++||.|+||+||+..|+++++++++++
T Consensus         1 m~~~~i~~~~~~~N-~yli~~~~~~~~ilID~G~~~~~i~~~l~~~~~~i~~Vi~TH~H~DH~gg~~~l~~~~~~~i~~~   79 (210)
T 2xf4_A            1 MNYRIIPVTAFSQN-CSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHYGVPVIGP   79 (210)
T ss_dssp             CEEEEEEETTTTEE-EEEEECTTTCEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHHTCCEECC
T ss_pred             CCEEEEECCCHHCE-EEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEEEE
T ss_conf             94399987844668-99999899998999979808999999999779934899978799855351899877509847850


Q ss_pred             CCCCCC------------------CCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCC
Q ss_conf             012343------------------23322033101001111222331025544567522686146543137704304613
Q gi|254780583|r   80 LEESSK------------------IPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCG  141 (256)
Q Consensus        80 ~~~~~~------------------i~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~G  141 (256)
                      ......                  ....+..+++|+.+.+|+.++++++|||||+||+|||+++.+++||||++|.+|+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~g~~~~~~i~tPGHT~g~~~~~~~~~~~l~~GD~~~~~~~~  159 (210)
T 2xf4_A           80 EKEDEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVG  159 (210)
T ss_dssp             CGGGHHHHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEEC
T ss_pred             CCHHHHHHCCCHHHHHHCCCCCCCCCCCCEEECCCCCCEECCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCC
T ss_conf             10456652042123211033345567785893168742369989999992699998689997788842148886379704


Q ss_pred             C--CCCCCHHHHHHHHH-HHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             4--46663156776654-42013446502016652045889877502344789999999998885789866787899987
Q gi|254780583|r  142 R--IFEDSYAEMFESLE-KIKSFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKK  218 (256)
Q Consensus       142 r--~~~G~~~~l~~Sl~-kl~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~~~tvPstl~~Ek~  218 (256)
                      +  +++|+.+++++||+ +|.+|+++++|||||.+                                    +||+++||+
T Consensus       160 ~~~~~~~d~~~~~~sl~~~l~~l~~~~~v~PGHG~------------------------------------~st~~~e~~  203 (210)
T 2xf4_A          160 RSDFPRGDHTQLIDAIKRKLLPLGDDVTFIPGHGP------------------------------------LSTLGYERL  203 (210)
T ss_dssp             CCCSTTCCHHHHHHHHHHHTGGGCTTCEEEESSSC------------------------------------CEEHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC------------------------------------CCCHHHHHH
T ss_conf             76678899999999999999708998399899998------------------------------------654999987


Q ss_pred             HCCCCC
Q ss_conf             282246
Q gi|254780583|r  219 VNPFLR  224 (256)
Q Consensus       219 ~NPflr  224 (256)
                      +|||||
T Consensus       204 ~N~~~~  209 (210)
T 2xf4_A          204 HNPFLQ  209 (210)
T ss_dssp             HCTTC-
T ss_pred             HCHHHC
T ss_conf             584524


No 7  
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=100.00  E-value=1.3e-38  Score=269.47  Aligned_cols=179  Identities=22%  Similarity=0.336  Sum_probs=149.6

Q ss_pred             CEEEEEEECCCEEEEEEECCCCEEEEECCC-CHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCC
Q ss_conf             145301105762699998899849998699-9899999999859964399985898433000001111000101200012
Q gi|254780583|r    4 LNIAISLYHDNFCILIHNHKYRLTAAIDAP-DTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEE   82 (256)
Q Consensus         4 ~~i~ip~~~DNy~YlI~d~~t~~~viIDpg-d~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~   82 (256)
                      ..|++.-++.| +|||.++  +.+++|||| +++.+++++++.+.++++|++||.|+||++|+..|++.++++++.+..+
T Consensus         4 ~~~~~Gp~~~N-~ylI~~~--~~~ilID~G~~~~~~~~~l~~~~~~~~~vi~TH~H~DH~~g~~~l~~~~~~~~~~~~~~   80 (207)
T 2zwr_A            4 FPVTLGPLQEN-AYLVETG--EGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEALDLPVYLHPLD   80 (207)
T ss_dssp             EEEEETTTTEE-EEEEEET--TEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHHCCCEEECGGG
T ss_pred             EEEEECCHHCE-EEEEEEC--CEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCEEECCCC
T ss_conf             99970881188-9999989--98999949869999999999879972499979997667521999999869948961332


Q ss_pred             CCCCC-----------------CCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCC--C
Q ss_conf             34323-----------------3220331010011112223310255445675226861465431377043046134--4
Q gi|254780583|r   83 SSKIP-----------------GIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGR--I  143 (256)
Q Consensus        83 ~~~i~-----------------~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr--~  143 (256)
                      .....                 .....+++|+.+    ..++++++||||+||+|||+++.++||+||++|.+++|+  +
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~vi~~PGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~  156 (207)
T 2zwr_A           81 LPLYEGADLAARAWGLAIPKPPLPVRPLEEGMRL----FGFQVLHLPGHSPGHVAFYDPEGAQVFSGDLLFRGSVGRYDL  156 (207)
T ss_dssp             HHHHHTHHHHHHHTTCCCCCCCSCCEECCTTCEE----TTEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEECCSSS
T ss_pred             CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEE----EEEEEECCCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCC
T ss_conf             2000362022101364323675430002245157----779983248878784799987789888635703688456567


Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
Q ss_conf             66631567766544201344650201665204588987750234478999999999888578986678789998728224
Q gi|254780583|r  144 FEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKKVNPFL  223 (256)
Q Consensus       144 ~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~~~tvPstl~~Ek~~NPfl  223 (256)
                      ++++.+++++||+||++|+++++|||||.+                                    |||+|.||+.||||
T Consensus       157 ~~~d~~~~~~sl~kl~~l~~~~~i~PGHG~------------------------------------~tt~g~e~~~n~~l  200 (207)
T 2zwr_A          157 PGADPKALFASLKRLLSLPPETRVHPGHGP------------------------------------GTTLGLEARTNPFL  200 (207)
T ss_dssp             TTCCHHHHHHHHHHHTTSCTTCEEEESBSC------------------------------------CEEHHHHHHHCTTC
T ss_pred             CCCCHHHHHHHHHHHHCCCCCEEEECCCCC------------------------------------CCCHHHHHHHCCCC
T ss_conf             788999999999999758998699999998------------------------------------64289998549023


Q ss_pred             CC
Q ss_conf             67
Q gi|254780583|r  224 RI  225 (256)
Q Consensus       224 r~  225 (256)
                      |.
T Consensus       201 ~~  202 (207)
T 2zwr_A          201 TG  202 (207)
T ss_dssp             --
T ss_pred             CC
T ss_conf             84


No 8  
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.97  E-value=2.4e-29  Score=209.41  Aligned_cols=191  Identities=18%  Similarity=0.191  Sum_probs=140.2

Q ss_pred             CCEEEEEEECCCCEEEEECCC---CHHHHHHHHHHCCC---CEEEEEECCCCHHHHCHHHHHHHH-CCCEEEECCCCCCC
Q ss_conf             762699998899849998699---98999999998599---643999858984330000011110-00101200012343
Q gi|254780583|r   13 DNFCILIHNHKYRLTAAIDAP---DTYIISKMLREKGW---FLTHIFNTHHHIDHTRANLNLKKF-FNCTIFGPLEESSK   85 (256)
Q Consensus        13 DNy~YlI~d~~t~~~viIDpg---d~~~i~~~l~~~~~---~i~~Il~TH~H~DHigg~~~l~~~-~~~~v~~~~~~~~~   85 (256)
                      -| +|+|.+.+ +.+++||+|   +.+.+.+.+.+.++   +|++|++||.|+||+||+..|++. ++++||++..+...
T Consensus        24 ~~-~yll~~g~-~~~~lIDtG~~~~~~~~~~~l~~~~~~~~~I~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~  101 (303)
T 2vw8_A           24 VP-VFLLRLGE-ASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQA  101 (303)
T ss_dssp             SC-EEEEEEET-TEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHHHHHH
T ss_pred             CE-EEEEEECC-CCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCHHHHHHCCCCCEEEECHHHHHH
T ss_conf             27-99999799-86899959898529999999998289824279899590998650863455421678669944889998


Q ss_pred             C------------------------------CCCCEEEEEHHCCCCCC-CCCCCCCCCCCCCCCCEEEECCCCCCCCCCE
Q ss_conf             2------------------------------33220331010011112-2233102554456752268614654313770
Q gi|254780583|r   86 I------------------------------PGIDHGLSDGDTFDFGS-HPIKIIATPGHTIGHICYHFMNDHFLCVGDT  134 (256)
Q Consensus        86 i------------------------------~~~~~~l~dgd~i~ig~-~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDt  134 (256)
                      +                              ...+..+.+|+.+++|+ ..++++++||||+||+|+|+++.++|||||+
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~lg~~~~~~~i~~PGHt~g~~~~~~~~~~~lf~GD~  181 (303)
T 2vw8_A          102 WKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDA  181 (303)
T ss_dssp             TTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEETTTTEEEEETT
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCCEEEECCCCCCCCCCCCCEEECCCCEEEECCC
T ss_conf             73630134577777654322102455555666785694799989857822673266799699875637179999998283


Q ss_pred             EEE--CCCCC---CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             430--46134---466631567766544201344650201665204588987750234478999999999888578
Q gi|254780583|r  135 LFS--LGCGR---IFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQN  205 (256)
Q Consensus       135 LF~--~g~Gr---~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~  205 (256)
                      ++.  ...|+   .+.++.+++.+||+||.+|++++.|+|||.....+-..+..++..-....+....+...+..+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~sl~rl~~l~~~~~i~PgHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (303)
T 2vw8_A          182 LGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMG  257 (303)
T ss_dssp             TCEECTTTCSEECCCSSCHHHHHHHHHHHHTSSCCSEEEESSSCEEEHHHHHTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             4777889776688999779999999999976899989999999733898999999999999999999999986578


No 9  
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus HB8}
Probab=99.96  E-value=3.8e-29  Score=208.19  Aligned_cols=170  Identities=24%  Similarity=0.337  Sum_probs=131.4

Q ss_pred             CEEEEEEECC--CEEEEEEECCCCEEEEECCCC-H----HHHHHHHHHCCC---CEEEEEECCCCHHHHCHHHHHHHHCC
Q ss_conf             1453011057--626999988998499986999-8----999999998599---64399985898433000001111000
Q gi|254780583|r    4 LNIAISLYHD--NFCILIHNHKYRLTAAIDAPD-T----YIISKMLREKGW---FLTHIFNTHHHIDHTRANLNLKKFFN   73 (256)
Q Consensus         4 ~~i~ip~~~D--Ny~YlI~d~~t~~~viIDpgd-~----~~i~~~l~~~~~---~i~~Il~TH~H~DHigg~~~l~~~~~   73 (256)
                      +.+|+|.--+  | +|+|.++  +.+++||+|- .    +.+.+.+++.++   +|++|++||.|+||+||+..+++ .+
T Consensus        11 i~~p~p~~~~~vN-~yli~~~--~~~vlIDtG~~~~~~~~~l~~~l~~~g~~~~~I~~Vi~TH~H~DH~Gg~~~l~~-~g   86 (317)
T 2zo4_A           11 LPVPIPYPLKTVN-LYLLQGA--GEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEG-LG   86 (317)
T ss_dssp             EEEECSSTTCEEE-EEEEEET--TEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHH-TT
T ss_pred             EECCCCCCCCCEE-EEEEEEC--CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHH-CC
T ss_conf             9588999988679-9999989--989999899997789999999999749997772499979988222221999974-59


Q ss_pred             CEEEECCCCCCCC--------------------------------------------CCCCEEEEEHHCCCCCCCCCCCC
Q ss_conf             1012000123432--------------------------------------------33220331010011112223310
Q gi|254780583|r   74 CTIFGPLEESSKI--------------------------------------------PGIDHGLSDGDTFDFGSHPIKII  109 (256)
Q Consensus        74 ~~v~~~~~~~~~i--------------------------------------------~~~~~~l~dgd~i~ig~~~~~vi  109 (256)
                      ++||++..+...+                                            +..+..+.+|+.+.+|+.+++++
T Consensus        87 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~gg~~~~vi  166 (317)
T 2zo4_A           87 ARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVL  166 (317)
T ss_dssp             CEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEE
T ss_pred             CCEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCEEECC
T ss_conf             98313788888887654050556788887654217833333334432012355556888867944785564388458457


Q ss_pred             CCCCCCCCCCEEEECCCCCCCCCCEEEECCCCC------CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHH
Q ss_conf             255445675226861465431377043046134------466631567766544201344650201665204588
Q gi|254780583|r  110 ATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGR------IFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNA  178 (256)
Q Consensus       110 ~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr------~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl  178 (256)
                      +|||||+||+|||+++.+++|+||++|....+.      .+.++..++++||+||.+|+++ .|+|||.....+.
T Consensus       167 ~~PGHt~~~~~~~~~~~~vlf~GD~l~~~~~~~~~~~~~~~~~~~~~~~~Sl~~l~~l~~~-~v~p~Hg~~~~~~  240 (317)
T 2zo4_A          167 WTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLADLGAR-VAYAGHFGPIADV  240 (317)
T ss_dssp             ECCSSSTTCEEEEETTTTEEEEETSCCSSSCCCCCCCTTSCSCHHHHHHHHHHHHHTSCCS-EEEESSSSCBSCH
T ss_pred             CCCCCCCCCEEEEECCCCEEEEECEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-EEECCCCCCCCCH
T ss_conf             7887899878999868885787048637877866788899888599999999998669998-9988999977899


No 10 
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.96  E-value=1.3e-28  Score=204.77  Aligned_cols=165  Identities=16%  Similarity=0.193  Sum_probs=131.7

Q ss_pred             EEEEEECCCCEEEEECCC----CHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCCCC---
Q ss_conf             699998899849998699----9899999999859964399985898433000001111000101200012343233---
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAP----DTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKIPG---   88 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpg----d~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i~~---   88 (256)
                      +|+|.++  +++++||||    +++.+++.+++.+.++++|++||.|+||++|+..|.+. +++++++......+..   
T Consensus        35 ~~~i~~~--~~~vliDtg~~~~~~~~~~~~i~~~~~~i~~ii~TH~H~DH~gg~~~l~~~-~~~~~a~~~~~~~~~~~~~  111 (228)
T 1jjt_A           35 GLVVLVN--AEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSR-SIPTYASELTNELLKKDGK  111 (228)
T ss_dssp             EEEEEET--TEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHHT-TCCEEEEHHHHHHHHHTTC
T ss_pred             EEEEEEC--CEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHHHHHC-CCCEEECHHHHHHHHHCCC
T ss_conf             9999989--999999798998999999999996599857999789980010809999867-9988874667777763134


Q ss_pred             -CCEEEEEHHCCCCCCCCCCCCC-CCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCC-CCCC
Q ss_conf             -2203310100111122233102-554456752268614654313770430461344666315677665442013-4465
Q gi|254780583|r   89 -IDHGLSDGDTFDFGSHPIKIIA-TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSF-SDKT  165 (256)
Q Consensus        89 -~~~~l~dgd~i~ig~~~~~vi~-tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl~~L-p~~t  165 (256)
                       .......++.+..++..+++++ +||||+|++|+|+++.+++|+||++|.+++|.+++|+.+++++||++|+.+ |+.+
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~gHt~~~~~~~~~~~~ilf~GD~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~  191 (228)
T 1jjt_A          112 VQATNSFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAK  191 (228)
T ss_dssp             CCCSEEECSSCCEEETTTEEEECCCCSSSTTCCEEEETTTTEEEEETTCCTTCCCCCTTCCTTTHHHHHHHHHHHTTTCS
T ss_pred             CCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf             21122357735996896899998279999996999934756388577726888675799999999999999996489983


Q ss_pred             EEECCCCCHHHHHHHHHH
Q ss_conf             020166520458898775
Q gi|254780583|r  166 HIYFGHEYTENNAYFALS  183 (256)
Q Consensus       166 ~i~pGHeYt~~nl~Fa~~  183 (256)
                      .|+|||........+..+
T Consensus       192 ~viPgHG~~~~~~~i~~~  209 (228)
T 1jjt_A          192 LVVPSHSEVGDASLLKLT  209 (228)
T ss_dssp             EEEESSSCCBCTHHHHHH
T ss_pred             EEEECCCCCCCHHHHHHH
T ss_conf             999098843598999999


No 11 
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER assymmetric UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.95  E-value=1e-27  Score=198.93  Aligned_cols=155  Identities=18%  Similarity=0.219  Sum_probs=126.7

Q ss_pred             EEEEEEECCCCEEEEECCC---CHHHHHHHHHHCCCC---EEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC--
Q ss_conf             2699998899849998699---989999999985996---43999858984330000011110001012000123432--
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAP---DTYIISKMLREKGWF---LTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI--   86 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpg---d~~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i--   86 (256)
                      .+|||.+++  .+++||+|   ..+.+.+.+++.+++   |++|++||.|.||+||+..++++++++||++..+...+  
T Consensus        26 ~~~li~~~~--~~iLID~G~~~~~~~i~~~l~~~g~~~~~i~~il~TH~H~DH~gg~~~~~~~~~a~i~~~~~~~~~l~~  103 (263)
T 1k07_A           26 ASYLIVTPR--GNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILS  103 (263)
T ss_dssp             CCEEEEETT--EEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHHCCEEEEEHHHHHHHHT
T ss_pred             EEEEEEECC--EEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEEECHHHHHHHH
T ss_conf             999999899--899993989520999999999769995342699978987011141999987539979994058777752


Q ss_pred             ------------------CCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCC-----
Q ss_conf             ------------------332203310100111122233102554456752268614654313770430461344-----
Q gi|254780583|r   87 ------------------PGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRI-----  143 (256)
Q Consensus        87 ------------------~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~-----  143 (256)
                                        ...+..+.+|+.+.+|+.+++++++||||+||+||+++....+++||++|.|+++..     
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~PGHt~g~~~~~~~~~~~~~~~~~~~~gd~~~~~~~~~  183 (263)
T 1k07_A          104 GGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIGVNPGYKL  183 (263)
T ss_dssp             TTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEEECCCCCCTTCCC
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCEEEEEEECCCCCCCCEEEEEECCCCCEECCEEEECCCCCCCCCCC
T ss_conf             11100122023334667776625741674673098579999578878778999998167853878999898447888754


Q ss_pred             -----CCCCHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf             -----66631567766544201344650201665
Q gi|254780583|r  144 -----FEDSYAEMFESLEKIKSFSDKTHIYFGHE  172 (256)
Q Consensus       144 -----~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHe  172 (256)
                           +.++.+++.+||++|.+|+.+ .|+|||.
T Consensus       184 ~~~~~~~~~~~~~~~sl~~l~~l~~~-~vi~gHg  216 (263)
T 1k07_A          184 VDNITYPKIAEDYKHSIKVLESMRCD-IFLGSHA  216 (263)
T ss_dssp             SSCSSCTTHHHHHHHHHHHHHTBCCS-EEEESBH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCC-EEEECCC
T ss_conf             36889987799999999999789939-9990989


No 12 
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.95  E-value=9.4e-28  Score=199.14  Aligned_cols=154  Identities=19%  Similarity=0.247  Sum_probs=127.0

Q ss_pred             EEEEEECCCCEEEEECCCC----HHHHHHHHHHC-CCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCC-----
Q ss_conf             6999988998499986999----89999999985-9964399985898433000001111000101200012343-----
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPD----TYIISKMLREK-GWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSK-----   85 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd----~~~i~~~l~~~-~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~-----   85 (256)
                      +|+|.++  +.+++||+|.    .+.+++.+++. +..+++|++||.|+||+||+..|++. ++++|++......     
T Consensus        39 ~~li~~~--~~~iliDt~~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gg~~~~~~~-~~~v~~~~~~~~~~~~~~  115 (232)
T 1a7t_A           39 GMIVINN--HQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRK-GVQSYANQMTIDLAKEKG  115 (232)
T ss_dssp             EEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHHT-TCEEEEEHHHHHHHHHHT
T ss_pred             EEEEEEC--CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHC-CCEEEEECCHHHHHHHCC
T ss_conf             9999989--9999996989989999999999871399738999799885222339999858-995998220255654325


Q ss_pred             CCCCCEEEEEHHCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCEEEECCC---CCCCCCCHHHHHHHHHHHHCC
Q ss_conf             23322033101001111222331025-54456752268614654313770430461---344666315677665442013
Q gi|254780583|r   86 IPGIDHGLSDGDTFDFGSHPIKIIAT-PGHTIGHICYHFMNDHFLCVGDTLFSLGC---GRIFEDSYAEMFESLEKIKSF  161 (256)
Q Consensus        86 i~~~~~~l~dgd~i~ig~~~~~vi~t-PGHT~g~i~~~~~~~~~lFtGDtLF~~g~---Gr~~~G~~~~l~~Sl~kl~~L  161 (256)
                      .+..+..+.++..+.+|+.+++++++ ||||+||+++|++++++|||||.+|.++.   |..++++..++.+||++|+++
T Consensus       116 ~~~~~~~~~~~~~~~~g~~~v~~~~~~pGHt~g~~~~~~~~~~vlf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~  195 (232)
T 1a7t_A          116 LPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCMLKDNQTTSIGNISDADVTAWPKTLDKVKAK  195 (232)
T ss_dssp             CCCCSEEESSEEEEEETTEEEEEECCCCSSSTTCCEEEETTTTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHHHHHHHH
T ss_pred             CCCCCEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             66660541576199989999999842389998727999589999998886278986676889999999999999999712


Q ss_pred             -CCCCEEECCCC
Q ss_conf             -44650201665
Q gi|254780583|r  162 -SDKTHIYFGHE  172 (256)
Q Consensus       162 -p~~t~i~pGHe  172 (256)
                       |+...|+|||.
T Consensus       196 ~~~~~~i~pgHG  207 (232)
T 1a7t_A          196 FPSARYVVPGHG  207 (232)
T ss_dssp             CTTCSEEEESSS
T ss_pred             CCCCEEEECCCC
T ss_conf             899819993899


No 13 
>2gmn_A Metallo-beta-lactamase; hydrolase; 1.40A {Bradyrhizobium japonicum usda 110} SCOP: d.157.1.1
Probab=99.95  E-value=6e-28  Score=200.41  Aligned_cols=154  Identities=20%  Similarity=0.309  Sum_probs=127.8

Q ss_pred             EEEEEECCCCEEEEECCC---CHHHHHHHHHHCCCC---EEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC---
Q ss_conf             699998899849998699---989999999985996---43999858984330000011110001012000123432---
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAP---DTYIISKMLREKGWF---LTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI---   86 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpg---d~~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i---   86 (256)
                      +|+|...+  .+++||+|   .++.+.+.+++.+.+   +++|++||.|+||+||+..|++.++++||++..+...+   
T Consensus        37 ~ylI~~~~--~~iLID~G~~~~~~~i~~~l~~~g~~~~~v~~ii~TH~H~DH~gg~~~l~~~~~a~i~~~~~~~~~~~~~  114 (274)
T 2gmn_A           37 VYVIKTSQ--GLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGG  114 (274)
T ss_dssp             CEEEEETT--EEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHHCCEEEEEGGGHHHHHHT
T ss_pred             EEEEEECC--EEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCHHHHHHHCCCEEEEEHHHHHHHHCC
T ss_conf             99999899--9799909894349999999997599813303999698996350625565775398487501010444323


Q ss_pred             ---------------CCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECC--------CCC-
Q ss_conf             ---------------33220331010011112223310255445675226861465431377043046--------134-
Q gi|254780583|r   87 ---------------PGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLG--------CGR-  142 (256)
Q Consensus        87 ---------------~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g--------~Gr-  142 (256)
                                     ...+..+++|+.+++|+.+++++++||||+||+||+++..+.+++||.+|.+|        +|+ 
T Consensus       115 ~~~~~~~~~~~~~~~~~~d~~v~~g~~~~lg~~~i~~i~tpGHt~g~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~  194 (274)
T 2gmn_A          115 YYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREVLFFCSGTVALNRLVGQP  194 (274)
T ss_dssp             CCTTCTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCTTCCCSSSC
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf             33322112334668876408940575342276413577379889987899986455763588799956874677773778


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf             466631567766544201344650201665
Q gi|254780583|r  143 IFEDSYAEMFESLEKIKSFSDKTHIYFGHE  172 (256)
Q Consensus       143 ~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHe  172 (256)
                      .+.++.+++.+||+++..|+.++ |+|||-
T Consensus       195 ~~~~~~~~~~~sl~~l~~l~~d~-vipgHg  223 (274)
T 2gmn_A          195 TYAGIVDDYRATFAKAKAMKIDV-LLGPHP  223 (274)
T ss_dssp             SSTTHHHHHHHHHHHHHHSCCSE-EECSSG
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCE-EECCCC
T ss_conf             99988999999999997699999-988989


No 14 
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes}
Probab=99.95  E-value=1.4e-27  Score=198.12  Aligned_cols=170  Identities=15%  Similarity=0.178  Sum_probs=134.4

Q ss_pred             EEEEEECCCCEEEEECCC----CHHHHHHHHHHC-CCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC----
Q ss_conf             699998899849998699----989999999985-99643999858984330000011110001012000123432----
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAP----DTYIISKMLREK-GWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI----   86 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpg----d~~~i~~~l~~~-~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i----   86 (256)
                      +|+|..+  ..+++||+|    .++.+++++++. +..+++|++||.|+||+||+..|.+. ++++|+++.....+    
T Consensus        33 ~~~i~~~--~~~vlIDtg~~~~~~~~l~~~i~~~~~~~i~~ii~TH~H~DH~gG~~~~~~~-~~~i~a~~~~~~~~~~~~  109 (219)
T 3l6n_A           33 SMYLVTK--KGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNNK-GIKTYATAKTNEFLKKDG  109 (219)
T ss_dssp             EEEEEET--TEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHHT-TCEEEECHHHHHHHHHTT
T ss_pred             EEEEEEC--CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHC-CCEEEEHHHHHHHHHCCC
T ss_conf             9999989--9999992989989999999999860299638999799995433868999628-988996022223321013


Q ss_pred             -CCCCEEEEEHHCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCEEEECCCCC---CCCCCHHHHHHHHHHHHCC
Q ss_conf             -3322033101001111222331025-5445675226861465431377043046134---4666315677665442013
Q gi|254780583|r   87 -PGIDHGLSDGDTFDFGSHPIKIIAT-PGHTIGHICYHFMNDHFLCVGDTLFSLGCGR---IFEDSYAEMFESLEKIKSF  161 (256)
Q Consensus        87 -~~~~~~l~dgd~i~ig~~~~~vi~t-PGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr---~~~G~~~~l~~Sl~kl~~L  161 (256)
                       +.....+.+++.+.+|+..++++++ ||||+||+++|+++.++||+||.+|.++.+.   ..+++..++.+||+++.++
T Consensus       110 ~~~~~~~~~~~~~~~~g~~~~~v~~~~pgHt~g~~~v~~~~~~vlf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~  189 (219)
T 3l6n_A          110 KATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFPKYNVLDGGCLVKSNSATDLGYIKEANVEQWPKTINKLKAK  189 (219)
T ss_dssp             CCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEETTTTEEEEETTSCCTTCSSCCCCTTCCTTTHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             34412882388578628856899724799999858999478999999283778985686888998999999999999700


Q ss_pred             -CCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             -44650201665204588987750234478999999999
Q gi|254780583|r  162 -SDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVK  199 (256)
Q Consensus       162 -p~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~  199 (256)
                       |+.+.|+|||.-.           .+...++++++.++
T Consensus       190 ~~~~~~ivpgHg~~-----------~~~~~i~~~l~~l~  217 (219)
T 3l6n_A          190 YSKATLIIPGHDEW-----------KGGGHVEHTLELLN  217 (219)
T ss_dssp             CTTCSEEEESBSCC-----------TTSCHHHHHHHHHH
T ss_pred             CCCCCEEECCCCCC-----------CCHHHHHHHHHHHH
T ss_conf             79998999489987-----------89899999999985


No 15 
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.94  E-value=1.6e-26  Score=191.22  Aligned_cols=155  Identities=17%  Similarity=0.233  Sum_probs=125.2

Q ss_pred             EEEEEECCCCEEEEECCC----CHHHHHHHHHH-CCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCC-----C
Q ss_conf             699998899849998699----98999999998-5996439998589843300000111100010120001234-----3
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAP----DTYIISKMLRE-KGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESS-----K   85 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpg----d~~~i~~~l~~-~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~-----~   85 (256)
                      +|+|.++  ..+++||+|    ..+.+++.+++ .+..+++|++||+|+||++|+..|.+. ++++|++.....     .
T Consensus        29 ~~~i~~~--~~~iliD~~~~~~~~~~l~~~i~~~~~~~i~~vi~TH~H~DH~~G~~~~~~~-~~~i~~~~~~~~~~~~~~  105 (223)
T 1m2x_A           29 AVYLVTD--KGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGKI-GAKTYSTKMTDSILAKEN  105 (223)
T ss_dssp             EEEEEET--TEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHHT-TCEEEEEHHHHHHHHHTT
T ss_pred             EEEEEEC--CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHC-CCEEEECCCHHHHHHCCC
T ss_conf             9999989--9899997999989999999999884199758999679997510619999868-997996120444442036


Q ss_pred             CCCCCEEEEEHHCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCEEEECCCCC---CCCCCHHHHHHHHHHHHCC
Q ss_conf             23322033101001111222331025-5445675226861465431377043046134---4666315677665442013
Q gi|254780583|r   86 IPGIDHGLSDGDTFDFGSHPIKIIAT-PGHTIGHICYHFMNDHFLCVGDTLFSLGCGR---IFEDSYAEMFESLEKIKSF  161 (256)
Q Consensus        86 i~~~~~~l~dgd~i~ig~~~~~vi~t-PGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr---~~~G~~~~l~~Sl~kl~~L  161 (256)
                      .+..+..+.++..+.+|+.+++++++ ||||+||+++|+++.++|||||.+|.+++..   +.+++..++.+||+++.+.
T Consensus       106 ~~~~~~~~~~~~~~~lg~~~i~~~~~~pgHt~~~~~~~~p~~~vlf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~  185 (223)
T 1m2x_A          106 KPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFPKEKVLVGGCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQK  185 (223)
T ss_dssp             CCCCSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEETTTTEEEEETTSCCTTCSSCCCCTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             65674123563389989989998246799999868999479999998276888996774788998999999999999700


Q ss_pred             -CCCCEEECCCCC
Q ss_conf             -446502016652
Q gi|254780583|r  162 -SDKTHIYFGHEY  173 (256)
Q Consensus       162 -p~~t~i~pGHeY  173 (256)
                       ++...|+|||..
T Consensus       186 ~~~~~~viPgHG~  198 (223)
T 1m2x_A          186 FSGAQYVVAGHDD  198 (223)
T ss_dssp             TTTCSEEEESBSC
T ss_pred             CCCCCEEECCCCC
T ss_conf             7999799979898


No 16 
>2whg_A VIM-4 metallo-beta-lactamase; hydrolase, alpha-beta/BETA-alpha fold; HET: FLC; 1.90A {Pseudomonas aeruginosa} PDB: 2wrs_A* 1ko3_A 1ko2_A
Probab=99.94  E-value=1.3e-26  Score=191.74  Aligned_cols=155  Identities=19%  Similarity=0.251  Sum_probs=120.8

Q ss_pred             CCEEEEEEECCCCEEEEECCC-C---HHHHHHHHHH-CCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCC--
Q ss_conf             762699998899849998699-9---8999999998-59964399985898433000001111000101200012343--
Q gi|254780583|r   13 DNFCILIHNHKYRLTAAIDAP-D---TYIISKMLRE-KGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSK--   85 (256)
Q Consensus        13 DNy~YlI~d~~t~~~viIDpg-d---~~~i~~~l~~-~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~--   85 (256)
                      .| +|+|.++  +.+++||+| .   ++.+++.+++ .+..+++|++||.|+||+||+..|++. ++++|++......  
T Consensus        38 ~N-~~~i~~~--~~~vlIDtg~~~~~~~~l~~~i~~~~~~~v~~vi~TH~H~DH~gg~~~~~~~-~~~~~~~~~~~~~~~  113 (230)
T 2whg_A           38 SN-GLIVRDG--DELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRAA-GVATYASPSTRRLAE  113 (230)
T ss_dssp             EE-EEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHHT-TCEEEECHHHHHHHH
T ss_pred             CE-EEEEEEC--CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHC-CCEEEECHHHHHHHH
T ss_conf             18-9999969--9999997989979999999999983199738999779982001609999758-994998789999998


Q ss_pred             -----CC--CCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCC---CCCCCCHHHHHHHH
Q ss_conf             -----23--322033101001111222331025544567522686146543137704304613---44666315677665
Q gi|254780583|r   86 -----IP--GIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCG---RIFEDSYAEMFESL  155 (256)
Q Consensus        86 -----i~--~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~G---r~~~G~~~~l~~Sl  155 (256)
                           .+  ..+..+.+++.+.+|+.++.+ ..||||+||+++|++++++||+||++|....+   .+.+++..++.+||
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~pGHt~g~~~~~~~~~~vlf~GD~v~~~~~~~~~~~~~~~~~~~~~sl  192 (230)
T 2whg_A          114 AEGNEIPTHSLEGLSSSGDAVRFGPVELFY-PGAAHSTDNLVVYVPSANVLYGGCAVHELSRTSAGNVADADLAEWPTSV  192 (230)
T ss_dssp             HHTCCCCSEECCSCSSTTCEEEETTEEEEC-CCSSSSTTCCEEEETTTTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHH
T ss_pred             HCCCCCCCCCCCEEECCCCEEEECCEEEEE-ECCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             527667643420350368668867868998-3799998979999868899998778745787887888999999999999


Q ss_pred             HHHHCC-CCCCEEECCCC
Q ss_conf             442013-44650201665
Q gi|254780583|r  156 EKIKSF-SDKTHIYFGHE  172 (256)
Q Consensus       156 ~kl~~L-p~~t~i~pGHe  172 (256)
                      ++++++ |+..+|+|||.
T Consensus       193 ~~l~~~~~~~~~v~PGHG  210 (230)
T 2whg_A          193 ERIQKHYPEAEVVIPGHG  210 (230)
T ss_dssp             HHHHHHCTTCCEEEESSS
T ss_pred             HHHHHHCCCCCEEECCCC
T ss_conf             999700899849996999


No 17 
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.93  E-value=8.8e-26  Score=186.36  Aligned_cols=184  Identities=14%  Similarity=0.188  Sum_probs=132.4

Q ss_pred             EEEEEECCCCEEEEECCC---CHHHHHHHHHHCCCC---EEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC---
Q ss_conf             699998899849998699---989999999985996---43999858984330000011110001012000123432---
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAP---DTYIISKMLREKGWF---LTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI---   86 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpg---d~~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i---   86 (256)
                      +|||..++  .+++||+|   ....+++.+++.+++   |++|++||.|+||+||+..|.++++++||++..+...+   
T Consensus        40 ~~li~~~~--g~iLID~G~~~~~~~~~~~l~~~g~~~~~I~~Il~TH~H~DH~gg~~~l~~~~~~~V~~~~~~~~~~~~~  117 (269)
T 1sml_A           40 ALLVQTPD--GAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARG  117 (269)
T ss_dssp             CEEEEETT--EEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHSSCEEEECHHHHHHHHTT
T ss_pred             EEEEEECC--EEEEECCCCCCHHHHHHHHHHHCCCCCHHCCEEEECCCCCCCCCCHHHHHHHHCCCEEECHHHHHHHHHC
T ss_conf             99999899--7699848995129999999997499803254999799983541509999998699476378898877501


Q ss_pred             ---------------CCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCC---------
Q ss_conf             ---------------33220331010011112223310255445675226861465431377043046134---------
Q gi|254780583|r   87 ---------------PGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGR---------  142 (256)
Q Consensus        87 ---------------~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr---------  142 (256)
                                     ...+..+.+|+.+.+|+.+++++++||||+|++||++...+..++||.+|.+.++.         
T Consensus       118 ~~~~~~~~~~~~~~~~~~d~~l~~g~~l~lg~~~~~~~~~PgH~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  197 (269)
T 1sml_A          118 GSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAYADSLSAPGYQLQGNP  197 (269)
T ss_dssp             TCSBTTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCTTCCCSSCT
T ss_pred             CHHHHHHCCCCCCCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf             11223312356788742525637998885099258999678889788899996345785217998388678996875689


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHH
Q ss_conf             466631567766544201344650201665204588987750--2344789999999998885
Q gi|254780583|r  143 IFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYFALSC--DPHNLELQKYCSKVKSMRS  203 (256)
Q Consensus       143 ~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl~Fa~~~--~p~n~~~~~~~~~~~~~~~  203 (256)
                      .+.+..+++..|++|++.|+.++ ++|||-. ..|...+...  ..+-..++.+.+.+++...
T Consensus       198 ~~~~~~~~~~~sl~~l~~l~~~~-l~~~H~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (269)
T 1sml_A          198 RYPHLIEDYRRSFATVRALPCDV-LLTPHPG-ASNWDYAAGARAGAKALTCKAYADAAEQKFD  258 (269)
T ss_dssp             TCTTHHHHHHHHHHHHHTSCCSE-EECSSGG-GGTCCGGGGGGTTTTCCCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCE-EECCCCC-CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             99865999999999997789899-9909987-2320113222545445789999999999999


No 18 
>2yz3_A Metallo-beta-lactamase; enzyme-inhibitor complex, hydrolase; HET: M5P; 2.30A {Pseudomonas putida} SCOP: d.157.1.1
Probab=99.93  E-value=8.7e-26  Score=186.39  Aligned_cols=152  Identities=18%  Similarity=0.246  Sum_probs=120.2

Q ss_pred             EEEEEECCCCEEEEECCCC----HHHHHHHHHH-CCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC----
Q ss_conf             6999988998499986999----8999999998-599643999858984330000011110001012000123432----
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPD----TYIISKMLRE-KGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI----   86 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd----~~~i~~~l~~-~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i----   86 (256)
                      +|+|.++  +.+++||+|.    ++.+++.+++ .+..+++|++||.|+||++|+..+++. ++++|++......+    
T Consensus        71 ~~~v~~~--~~~vlIDtg~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gG~~~~~~~-~~~v~a~~~~~~~~~~~~  147 (266)
T 2yz3_A           71 GLIVRDG--DELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRAA-GVATYASPSTRRLAEVEG  147 (266)
T ss_dssp             EEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHHT-TCEEEECHHHHHHHHTTT
T ss_pred             EEEEEEC--CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCHHHHHCC-CCEEEEECCHHHHHHHCC
T ss_conf             9999989--9999990999989999999999984399727999799981000875565206-976999620223333214


Q ss_pred             ---C--CCCEEEEEHHCCCCCCCCCCCCC-CCCCCCCCCEEEECCCCCCCCCCEEEECCCCC---CCCCCHHHHHHHHHH
Q ss_conf             ---3--32203310100111122233102-55445675226861465431377043046134---466631567766544
Q gi|254780583|r   87 ---P--GIDHGLSDGDTFDFGSHPIKIIA-TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGR---IFEDSYAEMFESLEK  157 (256)
Q Consensus        87 ---~--~~~~~l~dgd~i~ig~~~~~vi~-tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr---~~~G~~~~l~~Sl~k  157 (256)
                         +  ..+....+++.+.+|+.++  ++ .||||+|++++|++++++||+||.+|.++.+.   +..++...+.+||++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~g~v~~--~~~gpgHt~~~~~v~~p~~~vLf~GD~v~~~~~~~~~~~~~~~~~~~~~sl~~  225 (266)
T 2yz3_A          148 NEIPTHSLEGLSSSGDAVRFGPVEL--FYPGAAHSTDNLVVYVPSASVLYGGCAIYELSRTSAGNVADADLAEWPTSIER  225 (266)
T ss_dssp             CCCCSEECCSCSSTTEEEEETTEEE--EECCSSSSSSCCEEEEGGGTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHHHH
T ss_pred             CCCCCCCCCEECCCCCEEEECCEEE--EEECCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             6677544314604686788788788--74069999984899988999999864687788678888899999999999999


Q ss_pred             HHCC-CCCCEEECCCC
Q ss_conf             2013-44650201665
Q gi|254780583|r  158 IKSF-SDKTHIYFGHE  172 (256)
Q Consensus       158 l~~L-p~~t~i~pGHe  172 (256)
                      +..+ |+.+.|+|||.
T Consensus       226 l~~~~pd~~~vvPGHG  241 (266)
T 2yz3_A          226 IQQHYPEAQFVIPGHG  241 (266)
T ss_dssp             HHHHCTTCSEEEESSS
T ss_pred             HHCCCCCCCEEECCCC
T ss_conf             9700899839987999


No 19 
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding, periplasm,; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A
Probab=99.93  E-value=3.4e-25  Score=182.52  Aligned_cols=154  Identities=16%  Similarity=0.203  Sum_probs=114.2

Q ss_pred             EEEEEECCCCEEEEECCCC----HHHHHHHHHHC-CCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCCC---
Q ss_conf             6999988998499986999----89999999985-996439998589843300000111100010120001234323---
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPD----TYIISKMLREK-GWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKIP---   87 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd----~~~i~~~l~~~-~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i~---   87 (256)
                      +|+|.+++  .+++||+|-    ++.+.+.+++. +..+++|++||.|+||+||+..|++. +++|+++......+.   
T Consensus        25 ~~~i~~~~--~~vliD~g~~~~~~~~l~~~i~~~~~~pi~~vi~TH~H~DH~gg~~~~~~~-~~~i~a~~~~~~~~~~~~  101 (227)
T 3iog_A           25 SMVYFGAK--GVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKSI-GAKVVSTRQTRDLMKSDW  101 (227)
T ss_dssp             EEEEECSS--CEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHHT-TCEEEEEHHHHHHHHHHH
T ss_pred             EEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCC-CCEEEECHHHHHHHHHHH
T ss_conf             89999799--869992989979999999999861499841999689996532812330546-836761798999987412


Q ss_pred             ---------------CCC---EEEEEHHCCCCCCCCCCCCC-CCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCH
Q ss_conf             ---------------322---03310100111122233102-55445675226861465431377043046134466631
Q gi|254780583|r   88 ---------------GID---HGLSDGDTFDFGSHPIKIIA-TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSY  148 (256)
Q Consensus        88 ---------------~~~---~~l~dgd~i~ig~~~~~vi~-tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~  148 (256)
                                     ...   ......+.+++++..+++++ +||||+||+++|++++++||+||.++ .++|.++.++.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~g~v~~~~~~pGHt~g~~~~~~~~~~vlf~GD~~~-~~~~~~~~~~~  180 (227)
T 3iog_A          102 AEIVAFTRKGLPEYPDLPLVLPNVVHDGDFTLQEGKVRAFYAGPAHTPDGIFVYFPDEQVLYGGCILK-EKLGNLSFADV  180 (227)
T ss_dssp             HHHHHHHHHHCTTSCCCCCCCCSEEESSCEEETTTTEEEECCCCSSSSSCCEEEETTTTEEECGGGSC-SSCCCCTTCCT
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCEEECCCEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEECCCCC-CCCCCCCCCCH
T ss_conf             33322222025545787656886886585885587189999578989986646727878999746357-89678888899


Q ss_pred             HHHHHHHHHHHCC-CCCCEEECCCCC
Q ss_conf             5677665442013-446502016652
Q gi|254780583|r  149 AEMFESLEKIKSF-SDKTHIYFGHEY  173 (256)
Q Consensus       149 ~~l~~Sl~kl~~L-p~~t~i~pGHeY  173 (256)
                      .++.+||++|.++ ++...|+|||..
T Consensus       181 ~~~~~sl~~l~~~~~~~~~i~pgHg~  206 (227)
T 3iog_A          181 KAYPQTLERLKAMKLPIKTVIGGHDS  206 (227)
T ss_dssp             THHHHHHHHHHHTCCCCSEEECSSSC
T ss_pred             HHHHHHHHHHHCCCCCCCEEECCCCC
T ss_conf             99999999997037999799969998


No 20 
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 2bfz_A 2bg6_A 2bga_A ...
Probab=99.92  E-value=2.5e-25  Score=183.38  Aligned_cols=155  Identities=17%  Similarity=0.185  Sum_probs=124.6

Q ss_pred             CEEEEEEECCCCEEEEECCC----CHHHHHHHHHH-CCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC--
Q ss_conf             62699998899849998699----98999999998-599643999858984330000011110001012000123432--
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAP----DTYIISKMLRE-KGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI--   86 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpg----d~~~i~~~l~~-~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i--   86 (256)
                      | +|+|.++  +.+++||||    .++.+++.+++ .+..+++|++||.|+||+||+..|++. +++++.+..+....  
T Consensus        42 N-~~~I~~~--~~~vlID~g~~~~~~~~l~~~i~~~~~~~v~~ii~TH~H~DH~gg~~~~~~~-~~~i~~~~~~~~~~~~  117 (227)
T 1mqo_A           42 N-GLVLNTS--KGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER-GIKAHSTALTAELAKK  117 (227)
T ss_dssp             E-EEEEEET--TEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH-TCEEECBHHHHHHHHH
T ss_pred             E-EEEEEEC--CEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHC-CCEEEEECHHHHHHHH
T ss_conf             8-9999979--9989994989989999999999974499816999678981023539999747-9989994102333321


Q ss_pred             ---CCCCEEEEEHHCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCEEEECCC---CCCCCCCHHHHHHHHHHHH
Q ss_conf             ---3322033101001111222331025-54456752268614654313770430461---3446663156776654420
Q gi|254780583|r   87 ---PGIDHGLSDGDTFDFGSHPIKIIAT-PGHTIGHICYHFMNDHFLCVGDTLFSLGC---GRIFEDSYAEMFESLEKIK  159 (256)
Q Consensus        87 ---~~~~~~l~dgd~i~ig~~~~~vi~t-PGHT~g~i~~~~~~~~~lFtGDtLF~~g~---Gr~~~G~~~~l~~Sl~kl~  159 (256)
                         ......+.+++.+.+|+.+++.+++ ||||+|++++|+++.+++|+||.+|.++.   |..+.++.+++.+||+++.
T Consensus       118 ~~~~~~~~~~~~~~~l~~g~~~~~~~~~~pgHt~~~~~~~~~~~~vl~~GD~i~~~~~~~~~~~~~~~~~~~~~sl~~l~  197 (227)
T 1mqo_A          118 NGYEEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVGGCLVKSTSAKDLGNVADAYVNEWSTSIENVL  197 (227)
T ss_dssp             TTCCCCCCCBCSEEEEEETTEEEEEECCCCSSSSSCCEEEETTTTEEEEETTSCCTTCCSCCCCTTCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             25444332125674564188078888227987788458870678859960085679856757889989999999999998


Q ss_pred             C-CCCCCEEECCCC
Q ss_conf             1-344650201665
Q gi|254780583|r  160 S-FSDKTHIYFGHE  172 (256)
Q Consensus       160 ~-Lp~~t~i~pGHe  172 (256)
                      . +|+.+.|+|||.
T Consensus       198 ~~~~~~~~vvPgHG  211 (227)
T 1mqo_A          198 KRYRNINAVVPGHG  211 (227)
T ss_dssp             HHCCSCSEEEESSS
T ss_pred             HHCCCCCEEEECCC
T ss_conf             33799989995989


No 21 
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistance, structure, hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.92  E-value=6e-25  Score=180.97  Aligned_cols=155  Identities=17%  Similarity=0.199  Sum_probs=126.0

Q ss_pred             EEEEEECCCCEEEEECCCC----HHHHHHHHHHC-CCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC----
Q ss_conf             6999988998499986999----89999999985-99643999858984330000011110001012000123432----
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPD----TYIISKMLREK-GWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI----   86 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd----~~~i~~~l~~~-~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i----   86 (256)
                      +|++.. +.+.+++||+|.    .+.+.+++++. +..+.+|++||.|+||+||+..|++ .+++|+++..+...+    
T Consensus        32 ~~~i~~-~dg~viliD~~~~~~~~~~l~~~~~~~~~~~v~~II~TH~H~DH~Gg~~~~~~-~~~~i~a~~~~~~~~~~~~  109 (246)
T 2fhx_A           32 VLVAKM-LDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKK-MGAETWSSDLTKQLRLEEN  109 (246)
T ss_dssp             EEEEEC-TTSEEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHH-TTCEEEEEHHHHHHHHHHH
T ss_pred             EEEEEC-CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCC-CCCEEEECHHHHHHHHHHC
T ss_conf             999993-89879999999998999999999997459966999979999653488888524-7965885388889988602


Q ss_pred             ---------------------------CCCCEEEEEHHCCCCCCCCCCCCCC-CCCCCCCCEEEECCCCCCCCCCEEEEC
Q ss_conf             ---------------------------3322033101001111222331025-544567522686146543137704304
Q gi|254780583|r   87 ---------------------------PGIDHGLSDGDTFDFGSHPIKIIAT-PGHTIGHICYHFMNDHFLCVGDTLFSL  138 (256)
Q Consensus        87 ---------------------------~~~~~~l~dgd~i~ig~~~~~vi~t-PGHT~g~i~~~~~~~~~lFtGDtLF~~  138 (256)
                                                 +.....+.+++.+.+|+..++++++ ||||++++++++++++++|+||.+|.+
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ght~~~~~~~~~~~~vl~~GD~~~~~  189 (246)
T 2fhx_A          110 KKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDNVVVYFPKKKLLFGGCMIKPK  189 (246)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSSTTCCEEEETTTTEEEEETTCCSS
T ss_pred             CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCCEEEEECEECCC
T ss_conf             00001234430111100023566665788607737998999799456764137865678336884789999992761789


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf             61344666315677665442013446502016652
Q gi|254780583|r  139 GCGRIFEDSYAEMFESLEKIKSFSDKTHIYFGHEY  173 (256)
Q Consensus       139 g~Gr~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHeY  173 (256)
                      +.+.++.++.+++.+||+||.+|+.+ .|+|||.-
T Consensus       190 ~~~~~~~~~~~~~~~sL~~l~~l~~~-~l~pGHG~  223 (246)
T 2fhx_A          190 ELGYLGDANVKAWPDSARRLKKFDAK-IVIPGHGE  223 (246)
T ss_dssp             CCCCCTTCCTTTHHHHHHHGGGSCCS-EEEESBSC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCC-EEEECCCC
T ss_conf             98888999999999999999779949-99949999


No 22 
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.92  E-value=2.9e-26  Score=189.47  Aligned_cols=155  Identities=23%  Similarity=0.232  Sum_probs=117.8

Q ss_pred             ECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCCC---
Q ss_conf             05762699998899849998699989999999985996439998589843300000111100010120001234323---
Q gi|254780583|r   11 YHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKIP---   87 (256)
Q Consensus        11 ~~DNy~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i~---   87 (256)
                      ...+.+|||.++  +.+++||||-...+.. +. .--+|++|++||.|+||+||+..|++.++++||++......+.   
T Consensus        17 ~~~~n~~li~~~--~~~~lID~G~~~~~~~-~~-~~~~i~~VilTH~H~DH~gg~~~l~~~~~a~i~~~~~~~~~~~~~~   92 (261)
T 3adr_A           17 PEIATVYVMCGE--KLTVMIDAGVSNSIAD-FS-FLDKLDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSGFKKYLTSED   92 (261)
T ss_dssp             GGGSEEEEEECS--SCEEEECCCCTTCCCC-CT-TCSCCCEEECSCCSGGGTTTHHHHHHHSCCEEEEETTCTHHHHSHH
T ss_pred             CCEEEEEEEEEC--CEEEEECCCCCHHHHH-HH-CCCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEECHHHHHHHHCCH
T ss_conf             876899999949--9589987999829998-62-4067899995989864428766765435674333787999862501


Q ss_pred             -----------------------------CCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEC
Q ss_conf             -----------------------------322033101001111222331025544567522686146543137704304
Q gi|254780583|r   88 -----------------------------GIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSL  138 (256)
Q Consensus        88 -----------------------------~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~  138 (256)
                                                   .....+.+|+.+++|+.+++++++||||+||++|+.  +++|||||+++..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~~~~~~~~~pGHt~~~~~~~~--~~vlftGD~~~~~  170 (261)
T 3adr_A           93 GLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLV--DDFLFTGDSAGAY  170 (261)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCTTCEEEEE--TTEEEEETSSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCEEEEEECCCCCCCCEEEEE--CCEEEECCCCCCC
T ss_conf             24567788887640000101466555565524883363389506610047757988887689998--9999989846867


Q ss_pred             CC---CC--CCCCCHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf             61---34--466631567766544201344650201665
Q gi|254780583|r  139 GC---GR--IFEDSYAEMFESLEKIKSFSDKTHIYFGHE  172 (256)
Q Consensus       139 g~---Gr--~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHe  172 (256)
                      ..   ++  .+.++.+++.+||++|.+|+.+ +++|||-
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~-~i~pgHg  208 (261)
T 3adr_A          171 FNGVVIPTTPPVIDYKMYMESLKRQIELKPK-VVGFAHG  208 (261)
T ss_dssp             ETTEEECCCCSCCCHHHHHHHHHHHHHTCCS-EEEETTT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-EEEECCC
T ss_conf             7886326899998999999999999779989-9992999


No 23 
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.92  E-value=7.9e-25  Score=180.20  Aligned_cols=150  Identities=21%  Similarity=0.265  Sum_probs=126.4

Q ss_pred             EEEEEEECCCCEEEEECCC-CHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCCCC-CCEE
Q ss_conf             2699998899849998699-9899999999859964399985898433000001111000101200012343233-2203
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAP-DTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKIPG-IDHG   92 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpg-d~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i~~-~~~~   92 (256)
                      .+|+|..++  ..++|||+ ..+...+.+++.+ .+.+|++||.  ||++++..+++++++++|++..+...++. .++.
T Consensus        25 n~~lv~~~~--g~vlIDp~~~~~~~~~~l~~~g-~v~~iv~TH~--dH~g~~~~~~~~~~a~i~~~~~~~~~~~~~~d~~   99 (201)
T 2p97_A           25 NGFAWIRPE--GNILIDPVALSNHDWKHLESLG-GVVWIVLTNS--DHVRSAKEIADQTYTKIAGPVAEKENFPIYCDRW   99 (201)
T ss_dssp             EEEEECCTT--CCEEESCCCCCHHHHHHHHHTT-CCSEEECSSG--GGCTTHHHHHHHSCCEEEEEGGGTTSCSSCCSEE
T ss_pred             EEEEEEECC--EEEEEECCCCCHHHHHHHHHCC-CCEEEEECCH--HHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEE
T ss_conf             899999899--8599949988199999998569-9649998888--8988999999987990993142133356789888


Q ss_pred             EEEHHCCCCCCCCCCCCCCCC-CCCCCCEEEECCCCCCCCCCEEEECCCCCC------CCCCHHHHHHHHHHHHCCCCCC
Q ss_conf             310100111122233102554-456752268614654313770430461344------6663156776654420134465
Q gi|254780583|r   93 LSDGDTFDFGSHPIKIIATPG-HTIGHICYHFMNDHFLCVGDTLFSLGCGRI------FEDSYAEMFESLEKIKSFSDKT  165 (256)
Q Consensus        93 l~dgd~i~ig~~~~~vi~tPG-HT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~------~~G~~~~l~~Sl~kl~~Lp~~t  165 (256)
                      +.+|+.+..|   ++++++|| ||+||++|+. .+++|||||+++..+.|++      +.++..++.+|++||.++++..
T Consensus       100 ~~dg~~~~~g---~~vi~~pG~Ht~g~v~~~~-~~~~Lf~GD~l~~~~~g~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~  175 (201)
T 2p97_A          100 LSDGDELVPG---LKVMELQGSKTPGELALLL-EETTLITGDLVRAYRAGGLEILPDEKLMNKQKVVASVRRLAALEKVE  175 (201)
T ss_dssp             ECTTCBSSTT---EEEEEECSSSSTTEEEEEE-TTTEEEECSSEEBSSTTSCEECCGGGCSCHHHHHHHHHHHHTCTTCC
T ss_pred             ECCCCEEEEE---EEEEEECCCCCCCCCCEEE-CCCEEEECCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf             4268886501---7999947888999843330-35639989881578999721578766779999999999996179996


Q ss_pred             EEECCCCC
Q ss_conf             02016652
Q gi|254780583|r  166 HIYFGHEY  173 (256)
Q Consensus       166 ~i~pGHeY  173 (256)
                      .|+|||.+
T Consensus       176 ~i~pgHG~  183 (201)
T 2p97_A          176 AVLVGDGW  183 (201)
T ss_dssp             EEEESBBC
T ss_pred             EEECCCCC
T ss_conf             99958997


No 24 
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.92  E-value=4.1e-25  Score=182.05  Aligned_cols=157  Identities=18%  Similarity=0.094  Sum_probs=120.7

Q ss_pred             CEEEEEEECCCCEEEEECCCC---HHHHHHHHHHC-C-CCEEEEEECCCCHHHHCHHHHHHHH-CCCEEEECCCCCCCC-
Q ss_conf             626999988998499986999---89999999985-9-9643999858984330000011110-001012000123432-
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD---TYIISKMLREK-G-WFLTHIFNTHHHIDHTRANLNLKKF-FNCTIFGPLEESSKI-   86 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~-~-~~i~~Il~TH~H~DHigg~~~l~~~-~~~~v~~~~~~~~~i-   86 (256)
                      | +|||.++   +.++||||.   .+.+++.+++. + -+|++|++||.|+||+||+..|.+. ++++|+++......+ 
T Consensus        42 N-sYLI~~e---~~vLIDtg~~~~~~~~l~~i~~~i~~~~I~~II~TH~H~DH~ggl~~l~~~~p~a~i~~~~~~~~~~~  117 (414)
T 2q9u_A           42 N-SYFIDDE---CPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLK  117 (414)
T ss_dssp             C-CEEECSS---SCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHH
T ss_pred             E-EEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf             9-9999669---88999099801699999999975698779989969096647602999998788987997589998888


Q ss_pred             ------CCCCEEEEEHHCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCCEEEECCC-CCCC--CCC---------
Q ss_conf             ------33220331010011112223310255-4456752268614654313770430461-3446--663---------
Q gi|254780583|r   87 ------PGIDHGLSDGDTFDFGSHPIKIIATP-GHTIGHICYHFMNDHFLCVGDTLFSLGC-GRIF--EDS---------  147 (256)
Q Consensus        87 ------~~~~~~l~dgd~i~ig~~~~~vi~tP-GHT~g~i~~~~~~~~~lFtGDtLF~~g~-Gr~~--~G~---------  147 (256)
                            ......+++|+.+.+|+.+++++++| |||+|++++|.+++++|||||.+...++ +..|  +.+         
T Consensus       118 ~~~~~~~~~~~~~~~g~~l~lg~~~l~~i~~p~gH~~~~~~~y~~~~~iLfsGD~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (414)
T 2q9u_A          118 ILYGMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDKILFSNDGFGQHYATSRRWADECDVSHVMHLFK  197 (414)
T ss_dssp             HHHCCTTCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHH
T ss_pred             HHCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             74389865258715898897565589997036898689789999898968945745667888767653234266799999


Q ss_pred             ----------HHHHHHHHHHHHCCCCCCEEECCCCCHH
Q ss_conf             ----------1567766544201344650201665204
Q gi|254780583|r  148 ----------YAEMFESLEKIKSFSDKTHIYFGHEYTE  175 (256)
Q Consensus       148 ----------~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~  175 (256)
                                ..++.+||+||..|+.+ .|+|||-...
T Consensus       198 ~y~~~~~~p~~~~~~~~Lekl~~Ldi~-~I~PgHGpi~  234 (414)
T 2q9u_A          198 EYTANILGLFSAQMRKALEVASTVEIK-YILSAHGVSW  234 (414)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHTSCCS-EEEESSSCBE
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHCCCCC-EEEECCCCEE
T ss_conf             998773022399999999997578978-9980896724


No 25 
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidoreductase; HET: FMN; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2ohi_A* 2ohj_A*
Probab=99.91  E-value=1.9e-24  Score=177.65  Aligned_cols=174  Identities=16%  Similarity=0.170  Sum_probs=122.1

Q ss_pred             CEEEEEEECCCCEEEEECCCC---HHHHHHHH----HHCC-CCEEEEEECCCCHHHHCHHHHHHHH-CCCEEEECCCCCC
Q ss_conf             626999988998499986999---89999999----9859-9643999858984330000011110-0010120001234
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD---TYIISKML----REKG-WFLTHIFNTHHHIDHTRANLNLKKF-FNCTIFGPLEESS   84 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l----~~~~-~~i~~Il~TH~H~DHigg~~~l~~~-~~~~v~~~~~~~~   84 (256)
                      | +|||.+++  .+++||||.   .+.+.+.+    +..+ .+|++|++||.|+||+||+..+.+. ++++++++.....
T Consensus        36 N-sYlI~~~~--~~~LIDtG~~~~~~~~~~~l~~~~~~i~~~~I~~Ii~TH~H~DH~ggl~~~~~~~~~~~~~~~~~~~~  112 (404)
T 2ohh_A           36 N-AYLVCGDE--GVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVK  112 (404)
T ss_dssp             C-CEEEECSS--CEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHHH
T ss_pred             E-EEEEECCC--EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECHHHHH
T ss_conf             9-99997198--25999198984389999999999864796568699989999875411999998779988996788887


Q ss_pred             CC--------CCCCEEEEEHHCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCCEEEECCCC--CCCC--C-----
Q ss_conf             32--------33220331010011112223310255-44567522686146543137704304613--4466--6-----
Q gi|254780583|r   85 KI--------PGIDHGLSDGDTFDFGSHPIKIIATP-GHTIGHICYHFMNDHFLCVGDTLFSLGCG--RIFE--D-----  146 (256)
Q Consensus        85 ~i--------~~~~~~l~dgd~i~ig~~~~~vi~tP-GHT~g~i~~~~~~~~~lFtGDtLF~~g~G--r~~~--G-----  146 (256)
                      .+        +.....+.+|+++.+|+.+++++++| |||+||+|+|.++.++|||||++...+|+  ++..  +     
T Consensus       113 ~l~~~~~~~~~~~~~~~~~g~~l~lg~~~l~~i~~p~gH~~~~~~~~~~~~~iLfsgD~~g~~~~~~~~~~~~~~~~~~~  192 (404)
T 2ohh_A          113 GLLKHYPSLREAEFMTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLLDEDGILFSNDAFGQHLCCPQRLDREIPEYILM  192 (404)
T ss_dssp             HHHHHCGGGGGSCEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEEETTTEEECTTTTCCCCCCSCCBGGGSCHHHHH
T ss_pred             HHHHHCCCCCCHHHEECCCCCEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             77752677762331322579889737615899952688989968999889999997976666778864101445630237


Q ss_pred             -------------CHHHHHHHHHHHHCCC---CCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             -------------3156776654420134---4650201665204588987750234478999999999
Q gi|254780583|r  147 -------------SYAEMFESLEKIKSFS---DKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVK  199 (256)
Q Consensus       147 -------------~~~~l~~Sl~kl~~Lp---~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~  199 (256)
                                   ...++.++|++|..|.   +--.|+|||--...+-         .+.++.|.+|+.
T Consensus       193 ~~~~~yy~~i~~p~~~~~~~~l~~l~~L~~~~~i~~I~PgHGpv~~~~---------~~~i~~y~~~~~  252 (404)
T 2ohh_A          193 DAARKFYANLITPLSKLVLKKFDEVKELGLLERIQMIAPSHGQIWTDP---------MKIIEAYTGWAT  252 (404)
T ss_dssp             HHHHHHHHHHTGGGHHHHHHHHHHHHHTTCGGGCSEEECSSSCBBSSH---------HHHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHCCH---------HHHHHHHHHHHH
T ss_conf             777543645026768999999999986646678639962770275698---------999999998610


No 26 
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.91  E-value=2.4e-24  Score=177.08  Aligned_cols=158  Identities=16%  Similarity=0.108  Sum_probs=120.8

Q ss_pred             CEEEEEEECCCCEEEEECCCC---HHHHHHHHHHC--CCCEEEEEECCCCHHHHCHHHHHHHHC-CCEEEECCCCCCC--
Q ss_conf             626999988998499986999---89999999985--996439998589843300000111100-0101200012343--
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD---TYIISKMLREK--GWFLTHIFNTHHHIDHTRANLNLKKFF-NCTIFGPLEESSK--   85 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~--~~~i~~Il~TH~H~DHigg~~~l~~~~-~~~v~~~~~~~~~--   85 (256)
                      | +|||.++   ++++||||.   .+.+++.+++.  ..+|++|++||.|.||+||+..+.+.+ +++++++......  
T Consensus        37 N-sYlI~~~---~~vLIDtg~~~~~~~~~~~l~~~~~~~~I~~Ii~TH~H~DH~Gg~~~l~~~~p~~~v~~~~~~~~~~~  112 (398)
T 1ycg_A           37 N-AYLIVDD---KTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLK  112 (398)
T ss_dssp             C-CEEECSS---SCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred             E-EEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf             9-9999729---99999499846799999999975597686599927898677705999998689998996899998776


Q ss_pred             -----CCCCCEEEEEHHCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCCEEEECCCCC-CC--------------
Q ss_conf             -----233220331010011112223310255-445675226861465431377043046134-46--------------
Q gi|254780583|r   86 -----IPGIDHGLSDGDTFDFGSHPIKIIATP-GHTIGHICYHFMNDHFLCVGDTLFSLGCGR-IF--------------  144 (256)
Q Consensus        86 -----i~~~~~~l~dgd~i~ig~~~~~vi~tP-GHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr-~~--------------  144 (256)
                           .+.....+.+|+++.+|+..++++++| ||+++++++|.++.++|||||.....+|.. .|              
T Consensus       113 ~~~~~~~~~~~~~~~g~~l~lg~~~~~~~~~p~~h~~~~~~~~~~~~~iLfsgD~~~~~~~~~~~~~d~~~~~~~~~~~~  192 (398)
T 1ycg_A          113 AHYSHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYVPEEALLLPNDAFGQHIATSVRFDDQVDAGLIMDEAA  192 (398)
T ss_dssp             HHTCSCCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHH
T ss_pred             HHCCCCCCCCEEECCCCEEEECCCEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             40246775506825998898168159999789888888579998898889918846767788653031122145689875


Q ss_pred             -------CCCHHHHHHHHHHHHCCCCCC-EEECCCCCHH
Q ss_conf             -------663156776654420134465-0201665204
Q gi|254780583|r  145 -------EDSYAEMFESLEKIKSFSDKT-HIYFGHEYTE  175 (256)
Q Consensus       145 -------~G~~~~l~~Sl~kl~~Lp~~t-~i~pGHeYt~  175 (256)
                             ..+..++.++|++|..|+.+. .|+|||--..
T Consensus       193 ~~~~~~~~~~~~~~~~~L~~l~~L~l~i~~I~PgHGpv~  231 (398)
T 1ycg_A          193 KYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIW  231 (398)
T ss_dssp             HHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBB
T ss_pred             HCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHH
T ss_conf             312100368789999999999865998249970898632


No 27 
>1vme_A Flavoprotein; TM0755, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: c.23.5.1 d.157.1.3
Probab=99.90  E-value=5e-24  Score=175.01  Aligned_cols=155  Identities=19%  Similarity=0.158  Sum_probs=118.9

Q ss_pred             CEEEEEEECCCCEEEEECCCC---HHHHHHHHHHC-C-CCEEEEEECCCCHHHHCHHHHHHHHC--CCEEEECCCCCCCC
Q ss_conf             626999988998499986999---89999999985-9-96439998589843300000111100--01012000123432
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD---TYIISKMLREK-G-WFLTHIFNTHHHIDHTRANLNLKKFF--NCTIFGPLEESSKI   86 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~-~-~~i~~Il~TH~H~DHigg~~~l~~~~--~~~v~~~~~~~~~i   86 (256)
                      | +|||.++  +.+++||||.   .+.+++.+++. + .+|++|++||.|+||+||+..|.+++  +++|+++......+
T Consensus        53 N-sYLI~~~--~~~vLIDtg~~~~~~~~l~~l~~~i~~~~I~yIi~TH~H~DH~Ggl~~l~~~~~~~~~i~~~~~~~~~~  129 (410)
T 1vme_A           53 N-AYLVKLN--GANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTIGHDVEIIASNFGKRLL  129 (410)
T ss_dssp             E-EEEEECS--SCEEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHH
T ss_pred             E-EEEEEEC--CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHH
T ss_conf             9-9999979--957999199756799999999975797676899949396537754999999709998999788886420


Q ss_pred             C-----CCCEEEEEHHCCCCCCCCCCCCCCCC-CCCCCCEEEECCCCCCCCCCEEEECCCCC-CCCCC---H--------
Q ss_conf             3-----32203310100111122233102554-45675226861465431377043046134-46663---1--------
Q gi|254780583|r   87 P-----GIDHGLSDGDTFDFGSHPIKIIATPG-HTIGHICYHFMNDHFLCVGDTLFSLGCGR-IFEDS---Y--------  148 (256)
Q Consensus        87 ~-----~~~~~l~dgd~i~ig~~~~~vi~tPG-HT~g~i~~~~~~~~~lFtGDtLF~~g~Gr-~~~G~---~--------  148 (256)
                      .     .....+++|+.+++|+.+++++++|| |+|+++++|.  ++++||||.++.-+|+. ++..+   .        
T Consensus       130 ~~~~~~~~~~~v~~g~~l~lG~~~l~~i~~P~~H~p~~~~~y~--~~iLFsgD~~g~~~~~~~~~d~~~~~~e~~~~~~~  207 (410)
T 1vme_A          130 EGFYGIKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--DGILFSCDVGGGYLLPEILDDSNESVVERYLPHVT  207 (410)
T ss_dssp             HHHHCCCCCEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE--TTEEEEETTTCCSSCCSSSBTTCHHHHHHHHHHHH
T ss_pred             HHCCCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCCCCEEE--CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             1016765316835799998667269999789988899710212--89899886343567787324764025678899999


Q ss_pred             -----------HHHHHHHHHHHCCCCCCEEECCCCCH
Q ss_conf             -----------56776654420134465020166520
Q gi|254780583|r  149 -----------AEMFESLEKIKSFSDKTHIYFGHEYT  174 (256)
Q Consensus       149 -----------~~l~~Sl~kl~~Lp~~t~i~pGHeYt  174 (256)
                                 .++.++|+||..|+.+ .|+|||-..
T Consensus       208 ~yy~~i~~p~~~~v~~~L~ki~~L~i~-~I~PgHGpi  243 (410)
T 1vme_A          208 KYIVTVIGHYKNYILEGAEKLSSLKIK-ALLPGHGLI  243 (410)
T ss_dssp             HHHHHHHGGGHHHHHHHHHHHHTSCCS-EEEESSSCB
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHCCCCC-EEECCCCHH
T ss_conf             998875063289999999998659988-996088067


No 28 
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching, alternative binding site, product complex; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovarkurstaki} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.90  E-value=8.9e-24  Score=173.37  Aligned_cols=152  Identities=22%  Similarity=0.358  Sum_probs=110.9

Q ss_pred             EEEEEEECCCCEEEEECCCCH--------------------------HHHHHHHHHCCCC---EEEEEECCCCHHHHCHH
Q ss_conf             269999889984999869998--------------------------9999999985996---43999858984330000
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAPDT--------------------------YIISKMLREKGWF---LTHIFNTHHHIDHTRAN   65 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpgd~--------------------------~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~   65 (256)
                      |+|||..++  ..++||+|-.                          +.+.+.|++.|++   |++|++||.|+||+||+
T Consensus        40 ~~~LI~~~~--g~iLiDtG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~p~dI~~Vi~TH~H~DH~Gg~  117 (254)
T 3dha_A           40 WCYLLETEE--GPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGGN  117 (254)
T ss_dssp             EEEEEEETT--EEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHHTTG
T ss_pred             EEEEEEECC--CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHCCCC
T ss_conf             899999899--519995988955322331125421112356565606689999998499979996999079972102753


Q ss_pred             HHHHHHCCCEEEECCCCCCC------------CCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECC---CCCCC
Q ss_conf             01111000101200012343------------2332203310100111122233102554456752268614---65431
Q gi|254780583|r   66 LNLKKFFNCTIFGPLEESSK------------IPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMN---DHFLC  130 (256)
Q Consensus        66 ~~l~~~~~~~v~~~~~~~~~------------i~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~---~~~lF  130 (256)
                      ..+   +++++|.++.+...            .+..+..+-+++.--+++  +++++|||||+||++++++.   ..++|
T Consensus       118 ~~f---~~A~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--i~v~~tpGHT~G~~~~~v~~~~~~~vl~  192 (254)
T 3dha_A          118 GAF---TNTPIIVQRTEYEAALHREEYMKECILPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIETEQSGSVLL  192 (254)
T ss_dssp             GGC---SSSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEECSSEEEETT--EEEEECCSSSTTCEEEEEEETTTEEEEE
T ss_pred             CCC---CCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCEEEEECCEEECCC--EEECCCCCCCCCCEEEEEECCCCCEEEE
T ss_conf             113---56420038889998747211101104765553896075376187--4982458999423899998289988999


Q ss_pred             CCCEEEECCCCC--C--CCCCHHHHHHHHHHHHCC--CCCCEEECCCCC
Q ss_conf             377043046134--4--666315677665442013--446502016652
Q gi|254780583|r  131 VGDTLFSLGCGR--I--FEDSYAEMFESLEKIKSF--SDKTHIYFGHEY  173 (256)
Q Consensus       131 tGDtLF~~g~Gr--~--~~G~~~~l~~Sl~kl~~L--p~~t~i~pGHeY  173 (256)
                      +||+++..+..+  .  ..-+..+..+|+++|+.+  .++++|+||||.
T Consensus       193 ~GD~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~i~pgHd~  241 (254)
T 3dha_A          193 TIDASYTKENFEDEVPFAGFDPELALSSIKRLKEVVKKEKPIIFFGHDI  241 (254)
T ss_dssp             EETTCSSHHHHHSCCCCSCSCHHHHHHHHHHHHHHHHHHCCEEEESSCH
T ss_pred             EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCH
T ss_conf             9677885222678998678899999999999985502799799958883


No 29 
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, NSR435A, DFA5; 1.80A {Nostoc SP}
Probab=99.89  E-value=5.1e-23  Score=168.45  Aligned_cols=177  Identities=19%  Similarity=0.189  Sum_probs=125.5

Q ss_pred             CEEEEEEECCCCEEEEECCCCH---HHHHHHHHHCC--CCEEEEEECCCCHHHHCHHHHHHHH-CCCEEEECCCCCCCCC
Q ss_conf             6269999889984999869998---99999999859--9643999858984330000011110-0010120001234323
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPDT---YIISKMLREKG--WFLTHIFNTHHHIDHTRANLNLKKF-FNCTIFGPLEESSKIP   87 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd~---~~i~~~l~~~~--~~i~~Il~TH~H~DHigg~~~l~~~-~~~~v~~~~~~~~~i~   87 (256)
                      | +|||.++   ++++||||..   ..+++.+++..  -+|++|++||.|.||+||+..+++. ++++++++......+.
T Consensus        44 N-~YlI~~d---~~vLIDtG~~~~~~~~l~~~~~~~~~~~I~~IilTH~H~DH~Ggl~~~~~~~p~~~v~~~~~~~~~l~  119 (262)
T 3hnn_A           44 N-SYVIEGD---KTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLR  119 (262)
T ss_dssp             E-EEEEESS---SEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred             E-EEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf             9-9999329---99999189755799999999963784258899959977777622599997444857997789998887


Q ss_pred             -------CCCEEEEEHHCCCCC-CCCCCCCC-CCCCCCCCCEEEECCCCCCCCCCEEEECCCCC-CCC------------
Q ss_conf             -------322033101001111-22233102-55445675226861465431377043046134-466------------
Q gi|254780583|r   88 -------GIDHGLSDGDTFDFG-SHPIKIIA-TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGR-IFE------------  145 (256)
Q Consensus        88 -------~~~~~l~dgd~i~ig-~~~~~vi~-tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr-~~~------------  145 (256)
                             .....+.+|+.+.++ +..+.++. .||||+||+++|.+++++|||||.++..+++- .+.            
T Consensus       120 ~~~~~~~~~~~~~~~gd~~~~~~g~~l~~i~~~~~H~~~~~~~y~~~~~vLftgD~~~~~~~~~~~~~~~~~~~~~~~~~  199 (262)
T 3hnn_A          120 AAFPDDNLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYDVQTQILYTDKIFGAHICGDDVFDDNWESFKEDQRY  199 (262)
T ss_dssp             HHSSSSCCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEETTTTEEEEETTTCCCCCCSCCEESCGGGTHHHHHH
T ss_pred             HHHCCCCCCCCEECCCCEEEECCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             65235664322002551476227823799966899989962999878886996663456778865506771678999999


Q ss_pred             -------CCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             -------6315677665442013446502016652045889877502344789999999998885
Q gi|254780583|r  146 -------DSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRS  203 (256)
Q Consensus       146 -------G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~  203 (256)
                             .+.+++.+||+||.+|+.+ .|+|||-....        ++-...+++|+.|++....
T Consensus       200 ~~~~~~~~~~~~~~~sL~~l~~L~~~-~I~PgHGpvi~--------~~~~~~le~Y~~w~~~~~~  255 (262)
T 3hnn_A          200 YFNCLMAPHAIHVEAALEKISDLQVR-LYAVGHGPLVR--------TSLIALTQAYADWSKAQKL  255 (262)
T ss_dssp             HHHHHTGGGHHHHHHHHHHHTTSCCS-EEEESSSSEES--------TTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCHHHHHHHHHHHHCCCCC-EEECCCCCHHH--------CCHHHHHHHHHHHHHHHHH
T ss_conf             99985052499999999998789989-99957982453--------6999999999999877666


No 30 
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.89  E-value=4.3e-22  Score=162.43  Aligned_cols=206  Identities=12%  Similarity=0.080  Sum_probs=129.7

Q ss_pred             CEEEEEEECCCCEEEEECCCC----HHHHHHHH-HHCC-CCEEEEEECCCCHHHHCHHHHHHHH-----CCCEEEECCCC
Q ss_conf             626999988998499986999----89999999-9859-9643999858984330000011110-----00101200012
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD----TYIISKML-REKG-WFLTHIFNTHHHIDHTRANLNLKKF-----FNCTIFGPLEE   82 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd----~~~i~~~l-~~~~-~~i~~Il~TH~H~DHigg~~~l~~~-----~~~~v~~~~~~   82 (256)
                      | +|+|.+++  ..+|||||.    +..+++.+ ++.+ ..|++|++||+|.||+||+..+.+.     ..++||++...
T Consensus       124 N-~~~I~gdd--G~IVIDtg~s~e~A~aale~~~~~l~~kPV~aVI~TH~H~DH~GGa~~~~e~~~~~~~~~~IiA~~~~  200 (658)
T 2cfu_A          124 N-ITFIRGDS--GWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGF  200 (658)
T ss_dssp             C-EEEEECSS--SEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTH
T ss_pred             E-EEEEEECC--EEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCHHHHHCCCCCCCCCCEEEEECCH
T ss_conf             1-89999399--89999799998999999999998657998489998999701057479881354214677428973446


Q ss_pred             CC-----------------------------------------------CCCCCCEEEEEHHCCCCCCCCCCCCCCCC-C
Q ss_conf             34-----------------------------------------------32332203310100111122233102554-4
Q gi|254780583|r   83 SS-----------------------------------------------KIPGIDHGLSDGDTFDFGSHPIKIIATPG-H  114 (256)
Q Consensus        83 ~~-----------------------------------------------~i~~~~~~l~dgd~i~ig~~~~~vi~tPG-H  114 (256)
                      ..                                               .++.......+++.+.+|+.+++++++|| |
T Consensus       201 ~~~~~~e~~~~~~~~~rRa~~~~g~~lp~~~~g~~~~glg~~~~~~~~~~~~p~~~~~~~~~~l~igG~~~e~i~tPG~H  280 (658)
T 2cfu_A          201 MEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTE  280 (658)
T ss_dssp             HHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEETTEEEEEEECTTSS
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCEEEEEEECCCCC
T ss_conf             89976300110277888998876322785501044534456766686543589658741524677799899999768999


Q ss_pred             CCCCCEEEECCCCCCCCCCEEEECC----CCC-CCCCCHHHHHHHHHHHH---CCCCCCEEECCCCC-HHHHHHHHHHCC
Q ss_conf             5675226861465431377043046----134-46663156776654420---13446502016652-045889877502
Q gi|254780583|r  115 TIGHICYHFMNDHFLCVGDTLFSLG----CGR-IFEDSYAEMFESLEKIK---SFSDKTHIYFGHEY-TENNAYFALSCD  185 (256)
Q Consensus       115 T~g~i~~~~~~~~~lFtGDtLF~~g----~Gr-~~~G~~~~l~~Sl~kl~---~Lp~~t~i~pGHeY-t~~nl~Fa~~~~  185 (256)
                      |++|+++|+++.++||+||.++..-    ..| ...+++..+.++|+++.   .+..+ .++|||-. +.++-+-...+.
T Consensus       281 Tp~~l~vy~Pe~kvLf~GD~v~~~~~nl~t~rg~~~rd~~~w~~~Ld~l~~l~~~~ae-vl~p~Hg~Pi~G~e~I~~~L~  359 (658)
T 2cfu_A          281 SPAEMNIWLPRQKALLMAENVVGTLHNLYTLRGAEVRDALGWSKYINQALHRFGRQAE-VMFAVHNWPRWGNAEIVEVLE  359 (658)
T ss_dssp             SSSBEEEEETTTTEEECTTTSCSSCCCSSCTTCCCCCCHHHHHHHHHHHHHHTGGGCS-EEECSSSCCEESHHHHHHHHH
T ss_pred             CCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC-EEECCCCCCCCCHHHHHHHHH
T ss_conf             8774799975789687436656666565455677666668899999999986055753-674489875357478999999


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHCCCCCC
Q ss_conf             344789999999998885789866787------8999872822467
Q gi|254780583|r  186 PHNLELQKYCSKVKSMRSQNLYTNPST------ISLEKKVNPFLRI  225 (256)
Q Consensus       186 p~n~~~~~~~~~~~~~~~~~~~tvPst------l~~Ek~~NPflr~  225 (256)
                      -.-..++.-.+++....++|..  |-.      |-.+.+-.|++|-
T Consensus       360 ~~RD~~~~l~Dqtlr~~N~G~t--~~EI~e~i~LP~~l~~~~~~~~  403 (658)
T 2cfu_A          360 KQRDLYGYLHDQTLHLANQGVT--IGQVHNRLRLPPSLDQEWYDRG  403 (658)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCC--TTTGGGTCCCCHHHHTCGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHCCCHHHHHCCCCCC
T ss_conf             9999999999999999987999--9999862408965652732120


No 31 
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.88  E-value=3.1e-23  Score=169.84  Aligned_cols=156  Identities=15%  Similarity=0.127  Sum_probs=117.7

Q ss_pred             CEEEEEEECCCCEEEEECCCC---HHHHHHHHHHC-C-CCEEEEEECCCCHHHHCHHHHHHHHC-CCEEEECCCCCCCCC
Q ss_conf             626999988998499986999---89999999985-9-96439998589843300000111100-010120001234323
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD---TYIISKMLREK-G-WFLTHIFNTHHHIDHTRANLNLKKFF-NCTIFGPLEESSKIP   87 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~-~-~~i~~Il~TH~H~DHigg~~~l~~~~-~~~v~~~~~~~~~i~   87 (256)
                      | +|||.++   ++++||||.   .+.+++.+++. + .+|++|++||.|+||+||+..+.+.+ ++++|++......+.
T Consensus        36 N-~YlI~~e---~~vLIDtg~~~~~~~~~~~l~~~i~~~~I~~II~TH~H~DHiggl~~l~~~~~~~~v~~~~~~~~~~~  111 (402)
T 1e5d_A           36 N-AYLVEDE---KTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAME  111 (402)
T ss_dssp             E-EEEECSS---SCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred             E-EEEEECC---CEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf             9-9999769---99999599824699999999975698788889939996678867999999779998997577888877


Q ss_pred             -------CCCEEEEEHHCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCCEEEECCCCC-CC--------------
Q ss_conf             -------3220331010011112223310255-445675226861465431377043046134-46--------------
Q gi|254780583|r   88 -------GIDHGLSDGDTFDFGSHPIKIIATP-GHTIGHICYHFMNDHFLCVGDTLFSLGCGR-IF--------------  144 (256)
Q Consensus        88 -------~~~~~l~dgd~i~ig~~~~~vi~tP-GHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr-~~--------------  144 (256)
                             .....+.+|+++++|+..++++++| +|++|++++|.++.+++|+||.+...++.. .|              
T Consensus       112 ~~~~~~~~~~~~~~~g~~l~~g~~~l~~i~~p~~h~~~~~~~~~~~~~ilfsgD~~~~~~~~~~~~~d~~~~~~~~~~~~  191 (402)
T 1e5d_A          112 SHFHYKDWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWFADEKVLISNDIFGQNIAASERFSDQIPVHTLERAMR  191 (402)
T ss_dssp             HHHCCSSCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHH
T ss_pred             HCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             31467664320025863898489368999677777789669998688807704545677788762234454456899987


Q ss_pred             -------CCCHHHHHHHHHHHHCC--CCCCEEECCCCCH
Q ss_conf             -------66315677665442013--4465020166520
Q gi|254780583|r  145 -------EDSYAEMFESLEKIKSF--SDKTHIYFGHEYT  174 (256)
Q Consensus       145 -------~G~~~~l~~Sl~kl~~L--p~~t~i~pGHeYt  174 (256)
                             ..+..++.++|++|..+  +.+ .|+|||--.
T Consensus       192 ~~~~~i~~~~~~~~~~~L~~l~~l~l~~~-~I~PgHGpv  229 (402)
T 1e5d_A          192 EYYANIVNPYAPQTLKAIETLVGAGVAPE-FICPDHGVI  229 (402)
T ss_dssp             HHHHHHTGGGHHHHHHHHHHHHHTTCCCS-EEEESSSCB
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHCCCCCC-EEEECCCCE
T ss_conf             65654057639999999999986699813-896368430


No 32 
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.84  E-value=2.7e-21  Score=157.32  Aligned_cols=154  Identities=20%  Similarity=0.185  Sum_probs=104.0

Q ss_pred             EEEEEEECCCCEEEEECCCCH-----------------HHHHHHHHHCCCC---EEEEEECCCCHHHHCHHHHHHH---H
Q ss_conf             269999889984999869998-----------------9999999985996---4399985898433000001111---0
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAPDT-----------------YIISKMLREKGWF---LTHIFNTHHHIDHTRANLNLKK---F   71 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpgd~-----------------~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~~~l~~---~   71 (256)
                      ++|||..+  +..++||+|-.                 ..+.+.|++.|+.   |++|++||.|+||+||+.....   +
T Consensus        49 ~~~LI~~~--~~~iLiDtG~g~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~p~dId~VilTH~H~DH~Ggl~~~~~~~~~  126 (280)
T 3esh_A           49 HPILIQTA--QYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIF  126 (280)
T ss_dssp             CCEEEECS--SCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCCSS
T ss_pred             EEEEEEEC--CEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCCCCCHHHCCCCCCC
T ss_conf             89999929--9059996289962235532333577631069999998499979998997678966545880002475157


Q ss_pred             CCCEEEECCCCCC---------C----------CCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECC--CCCCC
Q ss_conf             0010120001234---------3----------2332203310100111122233102554456752268614--65431
Q gi|254780583|r   72 FNCTIFGPLEESS---------K----------IPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMN--DHFLC  130 (256)
Q Consensus        72 ~~~~v~~~~~~~~---------~----------i~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~--~~~lF  130 (256)
                      +++.++..+.+..         +          +......+.++..+.-|   +++++|||||+||+||+++.  ++++|
T Consensus       127 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---i~vi~tPGHTpGh~~~~v~~~~~~vlf  203 (280)
T 3esh_A          127 ENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVPG---IKMQHSGGHSFGHTIITIESQGDKAVH  203 (280)
T ss_dssp             TTCEEEEEHHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSEECSSTT---EEEEECCSSSTTCEEEEEEETTEEEEE
T ss_pred             CCCEEEECHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEEECCCCEEECCC---CEEEECCCCCCCCEEEEEEECCCEEEE
T ss_conf             87689950146422028231220232112344333523531488076488---679855998988889999959917999


Q ss_pred             CCCEEEECCCCCC-----CCCCHHHHHHHHHHHHC--CCCCCEEECCCCC
Q ss_conf             3770430461344-----66631567766544201--3446502016652
Q gi|254780583|r  131 VGDTLFSLGCGRI-----FEDSYAEMFESLEKIKS--FSDKTHIYFGHEY  173 (256)
Q Consensus       131 tGDtLF~~g~Gr~-----~~G~~~~l~~Sl~kl~~--Lp~~t~i~pGHeY  173 (256)
                      |||+++..+..+.     +.-++.+..+|.+|+..  ..++.+|+|||+.
T Consensus       204 ~GD~~~~~~~~~p~~~~~~d~d~~~a~~s~~~ll~~~~~~~~~v~~~H~~  253 (280)
T 3esh_A          204 MGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDE  253 (280)
T ss_dssp             CGGGSCSGGGCSTTCCCTTCSCHHHHHHHHHHHHHHHHHTTCEEECSSCS
T ss_pred             EEECCCHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf             98243411026988355466899999999999999997489899997899


No 33 
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center, quorum quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.82  E-value=2.6e-20  Score=150.90  Aligned_cols=154  Identities=18%  Similarity=0.215  Sum_probs=102.2

Q ss_pred             EEEEEEECCCCEEEEECCCCH-------------------------HHHHHHHHHCCCC---EEEEEECCCCHHHHCHHH
Q ss_conf             269999889984999869998-------------------------9999999985996---439998589843300000
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAPDT-------------------------YIISKMLREKGWF---LTHIFNTHHHIDHTRANL   66 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpgd~-------------------------~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~~   66 (256)
                      ++|||..++  ..++||+|-.                         +.+.+.|++.|++   |++|++||.|+||+||+.
T Consensus        44 ~~~LI~~~~--g~iLvDtG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~p~dI~~VilTH~H~DH~Ggl~  121 (276)
T 2r2d_A           44 SAYLIQCTD--ATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVE  121 (276)
T ss_dssp             EEEEEECSS--CEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGG
T ss_pred             EEEEEEECC--EEEEEECCCCHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCEEECCCCCCCCCCCCC
T ss_conf             899999499--049995788845512433343022211554565320299999983999799989984799604237413


Q ss_pred             HHHHHCCCEEEECCCCCCCC-----------CC----C----------CEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             11110001012000123432-----------33----2----------20331010011112223310255445675226
Q gi|254780583|r   67 NLKKFFNCTIFGPLEESSKI-----------PG----I----------DHGLSDGDTFDFGSHPIKIIATPGHTIGHICY  121 (256)
Q Consensus        67 ~l~~~~~~~v~~~~~~~~~i-----------~~----~----------~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~  121 (256)
                      .+   +++++|++..+....           +.    +          .....+.....+++-...++.+||||+||+|+
T Consensus       122 ~f---~~a~i~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~pGHTpGh~~~  198 (276)
T 2r2d_A          122 YF---GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGL  198 (276)
T ss_dssp             GC---SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEESSSSSSEEEE
T ss_pred             CC---CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCEEEECCEEEEECCCCCCCCCEEE
T ss_conf             57---863000389999986401234433453004554331044445655512688259709978866889987106899


Q ss_pred             EEC---CCCCCCCCCEEEECC-CCC--C---CCCCHHHHHHHHHHHHCCC--CCCEEECCCCC
Q ss_conf             861---465431377043046-134--4---6663156776654420134--46502016652
Q gi|254780583|r  122 HFM---NDHFLCVGDTLFSLG-CGR--I---FEDSYAEMFESLEKIKSFS--DKTHIYFGHEY  173 (256)
Q Consensus       122 ~~~---~~~~lFtGDtLF~~g-~Gr--~---~~G~~~~l~~Sl~kl~~Lp--~~t~i~pGHeY  173 (256)
                      ++.   +..+||+||.++... ...  .   +..+..++.+|+++|+.|-  .+..|+||||.
T Consensus       199 ~v~~~~~~~vl~~GD~~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~vipgHd~  261 (276)
T 2r2d_A          199 AVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDR  261 (276)
T ss_dssp             EEECSSSCEEEEEETTSCCHHHHSSSCCCCSSCSCHHHHHHHHHHHHHHHHHTTCEEEESSCH
T ss_pred             EEEECCCCEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCH
T ss_conf             999579997999958646175528988877666899999999999996633589889938498


No 34 
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.81  E-value=1.8e-20  Score=151.92  Aligned_cols=156  Identities=19%  Similarity=0.212  Sum_probs=103.2

Q ss_pred             CEEEEEEECCCCEEEEECCCC-------HHHHHHHHHHCCCC---EEEEEECCCCHHHHCHHHHHHH--HCCCEEEECCC
Q ss_conf             626999988998499986999-------89999999985996---4399985898433000001111--00010120001
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD-------TYIISKMLREKGWF---LTHIFNTHHHIDHTRANLNLKK--FFNCTIFGPLE   81 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd-------~~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~~~l~~--~~~~~v~~~~~   81 (256)
                      | +|||.+.  +..++||+|-       ...+.+.|++.|+.   |++|++||.|.||+||+..+.+  .+++.++.+..
T Consensus        98 n-~~LI~~g--~~~iLIDtG~g~~~~~~~~~l~~~L~~~Gi~p~dId~VvlTH~H~DHiGGl~~~~~~~fp~a~~~~~~~  174 (331)
T 1p9e_A           98 T-GYLVNTG--SKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQK  174 (331)
T ss_dssp             E-EEEEECS--SCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBHH
T ss_pred             E-EEEEEEC--CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHCCHHHHHHHHCCCCEEECCHH
T ss_conf             9-9999989--988999899985666118899999998499989997999597970101413355664078723431467


Q ss_pred             CCCCC---------CCC------C------EEEEEHHCCCCC-C-----CCCCCCCCCCCCCCCCEEEECC--CCCCCCC
Q ss_conf             23432---------332------2------033101001111-2-----2233102554456752268614--6543137
Q gi|254780583|r   82 ESSKI---------PGI------D------HGLSDGDTFDFG-S-----HPIKIIATPGHTIGHICYHFMN--DHFLCVG  132 (256)
Q Consensus        82 ~~~~i---------~~~------~------~~l~dgd~i~ig-~-----~~~~vi~tPGHT~g~i~~~~~~--~~~lFtG  132 (256)
                      +....         +..      .      ..+.+...+... +     -.++++++||||+||++|++..  ++++|+|
T Consensus       175 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ei~~Gi~vi~tpGHTpGh~~~~i~~~~~~~lf~G  254 (331)
T 1p9e_A          175 EADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLVPGIKALASHGHTPGHTTYVVESQGQKLALLG  254 (331)
T ss_dssp             HHHHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECSTTEEEEECTTSSTTCEEEEEEETTEEEEECT
T ss_pred             HHHHHHCCHHHHCCCCCHHCCHHHHHHHHCCCCCCCCEEEEECCCCEECCCEEEEECCCCCCCCEEEEEECCCEEEEEEE
T ss_conf             79987422001015420000114454441232000463785057402058648985589998767999961990899993


Q ss_pred             CEEEECCC--CC-----CCCCCHHHHHHHHHHHHC--CCCCCEEECCCC
Q ss_conf             70430461--34-----466631567766544201--344650201665
Q gi|254780583|r  133 DTLFSLGC--GR-----IFEDSYAEMFESLEKIKS--FSDKTHIYFGHE  172 (256)
Q Consensus       133 DtLF~~g~--Gr-----~~~G~~~~l~~Sl~kl~~--Lp~~t~i~pGHe  172 (256)
                      |+++...+  .+     -|.-++++-..|-++++.  -.++++|+++|.
T Consensus       255 D~i~~~~~~~~~p~~~~~~D~D~~~a~~tR~~ll~~~a~~~~lv~~~H~  303 (331)
T 1p9e_A          255 DLILVAAVQFDDPSVTTQLDSDSKSVAVERKKAFADAAKGGYLIAASHL  303 (331)
T ss_dssp             TSCCCHHHHTTCTTCCBTTCSSHHHHHHHHHHHHHHHHHHTCEEECTTS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             7344675333799860257769999999999999986049929999789


No 35 
>1ztc_A Hypothetical protein TM0894; structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.81  E-value=1.1e-19  Score=146.79  Aligned_cols=148  Identities=17%  Similarity=0.191  Sum_probs=102.8

Q ss_pred             EEEEEECCCCEEEEECCCC---HHHHHHHHHHCCCC---EEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCC---
Q ss_conf             6999988998499986999---89999999985996---43999858984330000011110001012000123432---
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPD---TYIISKMLREKGWF---LTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKI---   86 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~~~~---i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i---   86 (256)
                      +|+|..+  ++.++||||.   .+.+.+.+++.+++   |++|++||.|+||+||+..+.+.   .++.+.......   
T Consensus        37 ~~li~~~--~~~iLIDtG~~~~~~~l~~~l~~~g~~~~~I~~Ii~TH~H~DH~gg~~~~~~~---~~~~~~~~~~~~~~~  111 (221)
T 1ztc_A           37 VVYLEHK--DRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLFENA---TFYVHEVYKTKNYLS  111 (221)
T ss_dssp             EEEEEET--TEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCTTC---EEEEEGGGGGSCGGG
T ss_pred             EEEEEEC--CEEEEEECCCCCCHHHHHHHHHHCCCCHHHCCEEEECCCCCCCCCCHHHCCCC---CEEEEECHHHHHCCC
T ss_conf             9999989--99999919997219999999998499968984999599872444541210465---055410002221012


Q ss_pred             --------------CCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECCC---CCCCCCCEEEECCCCC--CCCCC
Q ss_conf             --------------3322033101001111222331025544567522686146---5431377043046134--46663
Q gi|254780583|r   87 --------------PGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMND---HFLCVGDTLFSLGCGR--IFEDS  147 (256)
Q Consensus        87 --------------~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~~---~~lFtGDtLF~~g~Gr--~~~G~  147 (256)
                                    ......+.+ +...+++..++++.+||||+||++++++.+   ++|||||++|......  ..+.+
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gHt~~~~~~~~~~~~~~~iLf~GD~~~~~~~~~~~~~~~~  190 (221)
T 1ztc_A          112 FGTIVGRIYSKVISSWKNVVLLK-GEESLFDEKVKVFHTPWHAREHLSFLLDTENAGRVLITGDITPNRLSYYDIIKGYG  190 (221)
T ss_dssp             GCHHHHHHHHHHHHTCCSEEEEC-SCCEETTTTEEEEECCSSSTTCEEEEEEETTTEEEEECGGGSCSHHHHHHHHHTCS
T ss_pred             CCCCCCCCCCCCCCCCCEEEEEC-CCEEEECEEEEECCCCCCCHHHEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             22211001223455542289706-84376020577247899883477689955899639997567898767745799878


Q ss_pred             HHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf             1567766544201344650201665
Q gi|254780583|r  148 YAEMFESLEKIKSFSDKTHIYFGHE  172 (256)
Q Consensus       148 ~~~l~~Sl~kl~~Lp~~t~i~pGHe  172 (256)
                      .++..++|+|+..+  + +|+|||+
T Consensus       191 ~~~~~~~l~~i~~~--d-~ivpgH~  212 (221)
T 1ztc_A          191 SVQVKNFLDRVGRI--D-LLVFPHD  212 (221)
T ss_dssp             CHHHHHHHHHHCCC--S-EEECSSS
T ss_pred             HHHHHHHHHHHHCC--C-EEEECCC
T ss_conf             99999999876449--9-9991989


No 36 
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus HB27} PDB: 3bk1_A*
Probab=99.44  E-value=1.6e-13  Score=106.89  Aligned_cols=134  Identities=13%  Similarity=0.048  Sum_probs=98.9

Q ss_pred             CCCEE-EEEEECC---CEEEEEEECCCCEEEEECCCC----HH--------HHHHHHHHCCCCEEEEEECCCCHHHHCHH
Q ss_conf             86145-3011057---626999988998499986999----89--------99999998599643999858984330000
Q gi|254780583|r    2 TSLNI-AISLYHD---NFCILIHNHKYRLTAAIDAPD----TY--------IISKMLREKGWFLTHIFNTHHHIDHTRAN   65 (256)
Q Consensus         2 ~~~~i-~ip~~~D---Ny~YlI~d~~t~~~viIDpgd----~~--------~i~~~l~~~~~~i~~Il~TH~H~DHigg~   65 (256)
                      ..+.| |+.-...   | +|++..+  +..++||.|-    .+        +=..+++++.-++++|++||.|.||+|++
T Consensus        15 ~~i~i~pLGG~~EIG~n-~~~~e~~--~~~iliD~G~~f~~~~~~gid~iiPd~~~l~~~~~~i~ai~lTHaH~DH~Gal   91 (562)
T 3bk2_A           15 DHVEIIPLGGMGEIGKN-ITVFRFR--DEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGL   91 (562)
T ss_dssp             CCEEEEEEESBSBSSCC-EEEEEET--TEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTH
T ss_pred             CEEEEEECCCCCHHHHC-EEEEEEC--CEEEEEECCCCCCCCCCCCCCEEECCCHHHHHCCCCCEEEEECCCCHHHHCCH
T ss_conf             82899966888904516-7999999--95999958999897568897589369689873766725999799855653772


Q ss_pred             HHHHH-----HCCCEEEECCCCCCCC---------CC---CCEEEEEHHCCCCCC-CCCCCCCCCCCCCCCCEEEEC--C
Q ss_conf             01111-----0001012000123432---------33---220331010011112-223310255445675226861--4
Q gi|254780583|r   66 LNLKK-----FFNCTIFGPLEESSKI---------PG---IDHGLSDGDTFDFGS-HPIKIIATPGHTIGHICYHFM--N  125 (256)
Q Consensus        66 ~~l~~-----~~~~~v~~~~~~~~~i---------~~---~~~~l~dgd~i~ig~-~~~~vi~tPGHT~g~i~~~~~--~  125 (256)
                      +.|..     .+++|||+.+.....+         ..   ....+..++.+.+|+ ++++++.+.+|.||+..++++  +
T Consensus        92 p~Ll~~~~~~~~~~PIY~T~~T~~Ll~~kl~e~~~~~~~~~~~~i~~~~~~~~g~~f~v~~~~v~hsipga~~~~i~t~~  171 (562)
T 3bk2_A           92 PFLLPMIFGKESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPI  171 (562)
T ss_dssp             HHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEETT
T ss_pred             HHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEEEEEECCCCCCCCEEEEEEECC
T ss_conf             87887521456885888799999999999997299855553147369965998211899988536777764699998299


Q ss_pred             CCCCCCCCEEEEC
Q ss_conf             6543137704304
Q gi|254780583|r  126 DHFLCVGDTLFSL  138 (256)
Q Consensus       126 ~~~lFtGDtLF~~  138 (256)
                      ..++||||.-|.+
T Consensus       172 g~IlyTGDfr~~~  184 (562)
T 3bk2_A          172 GTIVHTGDFKLDP  184 (562)
T ss_dssp             EEEEECCSCCCCS
T ss_pred             EEEEEEECCCCCC
T ss_conf             7899982555777


No 37 
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; 2.10A {Thermoanaerobacter tengcongensis MB4}
Probab=99.39  E-value=3.5e-12  Score=98.28  Aligned_cols=64  Identities=19%  Similarity=0.171  Sum_probs=51.3

Q ss_pred             EEEEEECCCCEEEEECCCCHHHHHHHHHHCCC---CEEEEEECCCCHHHHCHHHHHHH-HCCCEEEECCC
Q ss_conf             69999889984999869998999999998599---64399985898433000001111-00010120001
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPDTYIISKMLREKGW---FLTHIFNTHHHIDHTRANLNLKK-FFNCTIFGPLE   81 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~---~i~~Il~TH~H~DHigg~~~l~~-~~~~~v~~~~~   81 (256)
                      ||||..+  +..++||+|....+++.+++.++   +|++|++||.|.||+||+..+.+ .+.++++++..
T Consensus        35 S~LIe~~--~~~iLID~G~~~~~~~~l~~~gi~~~~Id~I~iTH~H~DHigGL~~ll~~~~~~~~~~~~~  102 (284)
T 2p4z_A           35 SLLLKKG--NKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKE  102 (284)
T ss_dssp             EEEEEET--TEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEEEGG
T ss_pred             EEEEEEC--CEEEEEECCCCHHHHHHHHHCCCCHHHCCEEEECCCCHHHCCCCHHHHHHCCCCCCCCCHH
T ss_conf             9999989--9689990799979999999849997899899974643543177667886455665444765


No 38 
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline binding protein; PCE, hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.29  E-value=1.8e-11  Score=93.72  Aligned_cols=160  Identities=18%  Similarity=0.137  Sum_probs=95.9

Q ss_pred             EEEEEECCCCEEEEECCCC--------------------------HHHHHHHHHHCCC-CEEEEEECCCCHHHHCHHHHH
Q ss_conf             6999988998499986999--------------------------8999999998599-643999858984330000011
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPD--------------------------TYIISKMLREKGW-FLTHIFNTHHHIDHTRANLNL   68 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd--------------------------~~~i~~~l~~~~~-~i~~Il~TH~H~DHigg~~~l   68 (256)
                      +.||..  .+..++||.|.                          .+.++.+|++.++ +|+++++||.|.||++|+..|
T Consensus        20 aili~~--~g~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~ID~vIiTH~H~DHigGl~~l   97 (547)
T 2bib_A           20 AIILES--NGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDEL   97 (547)
T ss_dssp             EEEEEE--TTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTHHHH
T ss_pred             EEEEEE--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHH
T ss_conf             999999--999999989998656643222222222345543321267889989875989379999999960576979999


Q ss_pred             HHHCC-CEEEECCCCCCCCCC-------------------------CCEEEEEHHCCCCCCCCCCCCC------------
Q ss_conf             11000-101200012343233-------------------------2203310100111122233102------------
Q gi|254780583|r   69 KKFFN-CTIFGPLEESSKIPG-------------------------IDHGLSDGDTFDFGSHPIKIIA------------  110 (256)
Q Consensus        69 ~~~~~-~~v~~~~~~~~~i~~-------------------------~~~~l~dgd~i~ig~~~~~vi~------------  110 (256)
                      .+.+. ..|+.+.........                         .......+..+.+++..++++.            
T Consensus        98 l~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  177 (547)
T 2bib_A           98 LSTYPVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYENETDSSGELK  177 (547)
T ss_dssp             HHHSCBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEETTEEEEEESCSCCBCTTSCBC
T ss_pred             HHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC
T ss_conf             96587878997997522221001234447999999999987499742212579817970881699936754554433344


Q ss_pred             -CCCCCCCCCEEEEC--CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCC-CC-HHHHHHHHHHCC
Q ss_conf             -55445675226861--46543137704304613446663156776654420134465020166-52-045889877502
Q gi|254780583|r  111 -TPGHTIGHICYHFM--NDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSFSDKTHIYFGH-EY-TENNAYFALSCD  185 (256)
Q Consensus       111 -tPGHT~g~i~~~~~--~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGH-eY-t~~nl~Fa~~~~  185 (256)
                       +++|...|+++++.  +.++|||||.=   ..      .-.++..   .-..++-|.+..|.| -- +-+.-.|...+.
T Consensus       178 ~~~~~N~~Sivl~i~~~g~~~LftGD~~---~~------~e~~ll~---~~~~~~~DvLkv~~HHGS~~s~s~~fl~~v~  245 (547)
T 2bib_A          178 KIWDDNSNSLISVVKVNGKKIYLGGDLD---NV------HGAEDKY---GPLIGKVDLMKFNHHHDTNKSNTKDFIKNLS  245 (547)
T ss_dssp             CBSSGGGGCCEEEEEETTEEEEECTTCC---ST------TSHHHHH---HHHHCCCSEEECTTTTBCSSSSCHHHHHHHC
T ss_pred             CCCCCCCCCEEEEEEECCEEEEEEECCC---HH------HHHHHHH---CCCCCCEEEEECCCCCCCCCCCCHHHHHHCC
T ss_conf             5789887768999999999999997898---05------6799864---6888854699968988988676798997549


Q ss_pred             CCCH
Q ss_conf             3447
Q gi|254780583|r  186 PHNL  189 (256)
Q Consensus       186 p~n~  189 (256)
                      |..-
T Consensus       246 P~~~  249 (547)
T 2bib_A          246 PSLI  249 (547)
T ss_dssp             CSEE
T ss_pred             CCEE
T ss_conf             9799


No 39 
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.26  E-value=1.7e-11  Score=93.78  Aligned_cols=130  Identities=20%  Similarity=0.316  Sum_probs=86.4

Q ss_pred             CCEE-EEEEECC--CEEEEEEECCCCEEEEECCCC-------HH--------HHHHHHHHCCCCEEEEEECCCCHHHHCH
Q ss_conf             6145-3011057--626999988998499986999-------89--------9999999859964399985898433000
Q gi|254780583|r    3 SLNI-AISLYHD--NFCILIHNHKYRLTAAIDAPD-------TY--------IISKMLREKGWFLTHIFNTHHHIDHTRA   64 (256)
Q Consensus         3 ~~~i-~ip~~~D--Ny~YlI~d~~t~~~viIDpgd-------~~--------~i~~~l~~~~~~i~~Il~TH~H~DHigg   64 (256)
                      ++.| ++..+..  ..+|+|..+.  .-+++|.|-       ..        +-..++.+. -++++|++||.|.||+|+
T Consensus       188 ~vrit~LGG~~EIGrs~~lv~~~~--~~ILlDcG~~~~~~~~~~~~~p~~~~p~~~~l~~~-~~idAVlITHaH~DHiG~  264 (651)
T 3af5_A          188 WIRITGLGGFREVGRSALLVQTDE--SFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLRE-GLLDAIIITHAHLDHCGM  264 (651)
T ss_dssp             CEEEEEEECSSSSSCCEEEEEESS--CEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHT-TCCCEEECSCSSHHHHTT
T ss_pred             CEEEEEECCCCCCCCCEEEEEECC--CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCEEEECCCCHHHHCC
T ss_conf             279999368886246679999679--68999899885656673113677677652123675-655689978898788686


Q ss_pred             HHHHHHH--CCCEEEECCCCCCCC-----------------C-----------CCCEEEEEHHCCCCC-CCCCCCCCCCC
Q ss_conf             0011110--001012000123432-----------------3-----------322033101001111-22233102554
Q gi|254780583|r   65 NLNLKKF--FNCTIFGPLEESSKI-----------------P-----------GIDHGLSDGDTFDFG-SHPIKIIATPG  113 (256)
Q Consensus        65 ~~~l~~~--~~~~v~~~~~~~~~i-----------------~-----------~~~~~l~dgd~i~ig-~~~~~vi~tPG  113 (256)
                      ++.|.++  +++|||+........                 +           .....++-|+.++++ ++.++++. -|
T Consensus       265 LP~L~~~g~~~~PIY~T~~T~~L~~~~~~d~~~i~~~~~~~~~y~~~di~~~~~~~~~l~yge~~~i~pd~~it~~~-aG  343 (651)
T 3af5_A          265 LPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHN-AG  343 (651)
T ss_dssp             HHHHHHTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEE-CS
T ss_pred             HHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCEEEECCCEEEEECC-CC
T ss_conf             88999737888877667899999999999999987611677778999999998541995799849807987998656-89


Q ss_pred             CCCCCCEEEEC--C--CCCCCCCCEEE
Q ss_conf             45675226861--4--65431377043
Q gi|254780583|r  114 HTIGHICYHFM--N--DHFLCVGDTLF  136 (256)
Q Consensus       114 HT~g~i~~~~~--~--~~~lFtGDtLF  136 (256)
                      |+.|+.++++.  +  .+++||||.=|
T Consensus       344 H~lGsa~~~i~i~~~~~~IvyTGDfk~  370 (651)
T 3af5_A          344 HILGSAIVHLHIGNGLHNIAITGDFKF  370 (651)
T ss_dssp             SSTTCEEEEEEETTTTTCEEECCSCCC
T ss_pred             CCCCCCEEEEEECCCCEEEEECCCCCC
T ss_conf             887030899995688668997778788


No 40 
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.24  E-value=3e-12  Score=98.66  Aligned_cols=129  Identities=14%  Similarity=0.124  Sum_probs=84.3

Q ss_pred             CEE-EEEEECC---CEEEEEEECCCCEEEEECCCC-----HHHHHHHHHHCC-CCEEEEEECCCCHHHHCHHHHHHHH--
Q ss_conf             145-3011057---626999988998499986999-----899999999859-9643999858984330000011110--
Q gi|254780583|r    4 LNI-AISLYHD---NFCILIHNHKYRLTAAIDAPD-----TYIISKMLREKG-WFLTHIFNTHHHIDHTRANLNLKKF--   71 (256)
Q Consensus         4 ~~i-~ip~~~D---Ny~YlI~d~~t~~~viIDpgd-----~~~i~~~l~~~~-~~i~~Il~TH~H~DHigg~~~l~~~--   71 (256)
                      |.| |+.-...   | +|+|..+  +..++||.|-     .......+.... -++++|++||.|.||+||++.|...  
T Consensus        12 ~~i~~LGG~~eiG~s-c~lv~~~--~~~illDcG~~~~~~~~~~~p~~~~~~~~~idai~lTH~H~DH~g~Lp~l~~~~~   88 (459)
T 2i7t_A           12 LLIRPLGAGQEVGRS-CIILEFK--GRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTS   88 (459)
T ss_dssp             EEEEEEESSSSSSSC-EEEEEET--TEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSS
T ss_pred             EEEEECCCCCCCCCC-EEEEEEC--CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHHHHHCC
T ss_conf             999982689864568-9999989--9299995889988652002677666782229999989785887692799998648


Q ss_pred             CCCEEEECCCCCCCCC----------------------------CCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             0010120001234323----------------------------322033101001111222331025544567522686
Q gi|254780583|r   72 FNCTIFGPLEESSKIP----------------------------GIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHF  123 (256)
Q Consensus        72 ~~~~v~~~~~~~~~i~----------------------------~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~  123 (256)
                      ++++||++......+.                            .....+.-++...+++..++++.+ ||++|+..+.+
T Consensus        89 ~~~piy~t~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~a-gH~~g~~~~~i  167 (459)
T 2i7t_A           89 FKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHA-GHVLGAAMFMI  167 (459)
T ss_dssp             CCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEEC-CSSTTCEEEEE
T ss_pred             CCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEEECCCCEEEECCEEEEEEEC-CCCCCCEEEEE
T ss_conf             99988831527999998889877541034323567799999776245870799568608759999844-77678579999


Q ss_pred             C--CCCCCCCCCEEE
Q ss_conf             1--465431377043
Q gi|254780583|r  124 M--NDHFLCVGDTLF  136 (256)
Q Consensus       124 ~--~~~~lFtGDtLF  136 (256)
                      +  +..+++|||+=+
T Consensus       168 ~~~~~~i~ytGD~~~  182 (459)
T 2i7t_A          168 EIAGVKLLYTGDFSR  182 (459)
T ss_dssp             EETTEEEEECCSCCC
T ss_pred             EECCEEEEECCCCCC
T ss_conf             989998885588677


No 41 
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Enterococcus faecalis V583} SCOP: d.157.1.10
Probab=99.22  E-value=4.6e-12  Score=97.47  Aligned_cols=119  Identities=18%  Similarity=0.267  Sum_probs=83.6

Q ss_pred             CEEEEEEECCCCEEEEECCCC--------H-HHHHHHH-----------------------HHCCCCEEEEEECCCCHHH
Q ss_conf             626999988998499986999--------8-9999999-----------------------9859964399985898433
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD--------T-YIISKML-----------------------REKGWFLTHIFNTHHHIDH   61 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd--------~-~~i~~~l-----------------------~~~~~~i~~Il~TH~H~DH   61 (256)
                      | +++|..++  ..+++|.|-        . +.+....                       ++..-++++|++||.|.||
T Consensus        21 ~-~~~i~~~~--~~illD~G~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~ai~iTH~H~DH   97 (429)
T 2az4_A           21 T-VIEVAYKD--AHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHLDH   97 (429)
T ss_dssp             C-EEEEEETT--EEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEEECSCSCHHH
T ss_pred             C-EEEEEECC--EEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHH
T ss_conf             3-89999999--08999479997765567541100011123466543333554211100122465666589989871726


Q ss_pred             HCHHHHHHHHCCCEEEECCCCCCCC--------------------CCCCEEEEEHHCCCCCCCCCCCCCCCCC-CCCCCE
Q ss_conf             0000011110001012000123432--------------------3322033101001111222331025544-567522
Q gi|254780583|r   62 TRANLNLKKFFNCTIFGPLEESSKI--------------------PGIDHGLSDGDTFDFGSHPIKIIATPGH-TIGHIC  120 (256)
Q Consensus        62 igg~~~l~~~~~~~v~~~~~~~~~i--------------------~~~~~~l~dgd~i~ig~~~~~vi~tPGH-T~g~i~  120 (256)
                      +|+.+.+..  +++||++.....-+                    ..--+.++.++.+++|+++++++.+. | .+|+.+
T Consensus        98 ~g~l~~l~~--~~piy~~~~t~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~-Hsi~gs~~  174 (429)
T 2az4_A           98 SRMINYLDP--AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPVD-HDAYGASA  174 (429)
T ss_dssp             HTTGGGBCT--TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEEEEEECC-CSSTTCEE
T ss_pred             HCCHHHHHH--CCCEEECHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCEEEECCEEEEEEECC-CCCCCCEE
T ss_conf             585256761--697652799999999987640001234022215543159958999699777799998566-78887548


Q ss_pred             EEEC--CCCCCCCCCEEEEC
Q ss_conf             6861--46543137704304
Q gi|254780583|r  121 YHFM--NDHFLCVGDTLFSL  138 (256)
Q Consensus       121 ~~~~--~~~~lFtGDtLF~~  138 (256)
                      |.++  +..++||||+-|.+
T Consensus       175 ~~i~~~~~~i~ytGD~~~~~  194 (429)
T 2az4_A          175 LLIRTPDHFITYTGDLRLHG  194 (429)
T ss_dssp             EEEEETTEEEEECCSCCSSS
T ss_pred             EEEECCCCEEEECCCEEECC
T ss_conf             99824674588546513158


No 42 
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein structure initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.17  E-value=4.8e-11  Score=90.86  Aligned_cols=117  Identities=15%  Similarity=0.188  Sum_probs=81.2

Q ss_pred             EEEEEECCCCEEEEECCCCHHHHHHHHHHC-C-CCEEEEEECCCCHHHHCHHHHHHHH-----------CCCEEEECCCC
Q ss_conf             699998899849998699989999999985-9-9643999858984330000011110-----------00101200012
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPDTYIISKMLREK-G-WFLTHIFNTHHHIDHTRANLNLKKF-----------FNCTIFGPLEE   82 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd~~~i~~~l~~~-~-~~i~~Il~TH~H~DHigg~~~l~~~-----------~~~~v~~~~~~   82 (256)
                      +|||..+  +..++||+|..  +...+++. + -+|++|++||.|.||++|+..|...           ...++|++...
T Consensus        45 ~~Li~~~--~~~iLiD~G~g--~~~~l~~~~~~~~id~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~l~i~~~~~~  120 (268)
T 1zkp_A           45 GYLFEHD--GFRLLVDCGSG--VLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFD  120 (268)
T ss_dssp             EEEEEET--TEEEEECCCTT--HHHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSS
T ss_pred             EEEEEEC--CCEEEEECCHH--HHHHHHHCCCHHHCCEEEEECCCHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECHHH
T ss_conf             7999999--92899959767--9999985498524979999279603333448887654202333356774458833667


Q ss_pred             CCCCC-------CCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCCCEEEE
Q ss_conf             34323-------3220331010011112223310255445675226861--4654313770430
Q gi|254780583|r   83 SSKIP-------GIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFM--NDHFLCVGDTLFS  137 (256)
Q Consensus        83 ~~~i~-------~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~--~~~~lFtGDtLF~  137 (256)
                      ...+.       .....+.++..+.+|+++++.+.++ |..+++.|.+.  +.+++|+|||-+.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~v~~~~~~-H~~~~~g~~i~~~~~~i~ysgDt~~~  183 (268)
T 1zkp_A          121 ENGFHSLTHEPHTKGIPYNPEETLQIGPFSISFLKTV-HPVTCFAMRITAGNDIVVYSADSSYI  183 (268)
T ss_dssp             HHHHHTTCBTTTEEEEECCTTSCEEETTEEEEEEECC-SSSCCEEEEEEETTEEEEECCSCCCC
T ss_pred             HHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEEECCC-CCCCCCEEEEECCCCEEEECCCCCCC
T ss_conf             8899876542255337706875598412899740377-77874134774279779988889988


No 43 
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli}
Probab=99.15  E-value=2.5e-10  Score=86.29  Aligned_cols=161  Identities=14%  Similarity=0.093  Sum_probs=98.1

Q ss_pred             CEEEEEEECCCCEEEEECCCCHHHHHHHHHHCC-CCEEEEEECCCCHHHHCHHHHHHH--HCCCEEEECCCCCCC-----
Q ss_conf             626999988998499986999899999999859-964399985898433000001111--000101200012343-----
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPDTYIISKMLREKG-WFLTHIFNTHHHIDHTRANLNLKK--FFNCTIFGPLEESSK-----   85 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~-~~i~~Il~TH~H~DHigg~~~l~~--~~~~~v~~~~~~~~~-----   85 (256)
                      +-|++|..+  +..++||+|....    +.+.. -++++|++||.|.||++|+..+..  ....+||++......     
T Consensus        39 ~ss~li~~~--~~~iLiD~G~~~~----~~~~~~~~id~I~iTH~H~DH~~GL~~l~~~~~~~i~iy~~~~~~~~~~~~~  112 (258)
T 3g1p_A           39 PCSGVVKFN--DAITLIDAGLHDL----ADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFK  112 (258)
T ss_dssp             BSEEEEEET--TEEEEECCCCTTH----HHHCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCSTTTTT
T ss_pred             EEEEEEEEC--CEEEEEECCHHHH----HHCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEECCCCCCHHHHHC
T ss_conf             349999989--9789998999999----8668985887999816741024462455442257853895441120224422


Q ss_pred             ---CCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEECC--CCCCCCCCEEEECCCCCCCCCCHHHHHHH-HHHH-
Q ss_conf             ---2332203310100111122233102554456752268614--65431377043046134466631567766-5442-
Q gi|254780583|r   86 ---IPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHICYHFMN--DHFLCVGDTLFSLGCGRIFEDSYAEMFES-LEKI-  158 (256)
Q Consensus        86 ---i~~~~~~l~dgd~i~ig~~~~~vi~tPGHT~g~i~~~~~~--~~~lFtGDtLF~~g~Gr~~~G~~~~l~~S-l~kl-  158 (256)
                         .......++.++.+++++.+++.+.++ |...++.|.++.  .+++|+|||-.      +.+...+.+... ++-+ 
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-H~~~~~g~~i~~~~~~i~y~gDt~~------~~~~~~~~l~~~~~d~li  185 (258)
T 3g1p_A          113 HPGLLDFSHTVEPFVVFDLQGLQVTPLPLN-HSKLTFGYLLETAHSRVAWLSDTAG------LPEKTLKFLRNNQPQVMV  185 (258)
T ss_dssp             SCTTEEEEEECCTTCCEEETTEEEEEEECC-SSSCCEEEEEECSSCEEEEECSCSS------CCHHHHHHHHHTCCSEEE
T ss_pred             CCCCCCCCCCCCCCEEEECCCEEEECCCCC-CCCCCEEEEEECCCEEEEECCCCCC------CCHHHHHHHCCCCCCEEE
T ss_conf             566543212356636885052441313247-8987549999629826998486788------898999996189988999


Q ss_pred             --HCCCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf             --01344650201665204588987750234
Q gi|254780583|r  159 --KSFSDKTHIYFGHEYTENNAYFALSCDPH  187 (256)
Q Consensus       159 --~~Lp~~t~i~pGHeYt~~nl~Fa~~~~p~  187 (256)
                        ...++...-.++|-.....++++..+.|.
T Consensus       186 ~d~~~~~~~~~~~~H~~~~ea~~~~~~~~~k  216 (258)
T 3g1p_A          186 MDCSHPPRADAPRNHCDLNTVLALNQVIRSP  216 (258)
T ss_dssp             EECCBSSCSSCCSSSCBHHHHHHHHHHHCCS
T ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf             5487762237999998999999999971989


No 44 
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.08  E-value=2.6e-11  Score=92.65  Aligned_cols=132  Identities=17%  Similarity=0.216  Sum_probs=83.5

Q ss_pred             CCEE-EEEEECC--CEEEEEEECCCCEEEEECCCCH----HH-HHH-HHHH-CC-CCEEEEEECCCCHHHHCHHHHHHH-
Q ss_conf             6145-3011057--6269999889984999869998----99-999-9998-59-964399985898433000001111-
Q gi|254780583|r    3 SLNI-AISLYHD--NFCILIHNHKYRLTAAIDAPDT----YI-ISK-MLRE-KG-WFLTHIFNTHHHIDHTRANLNLKK-   70 (256)
Q Consensus         3 ~~~i-~ip~~~D--Ny~YlI~d~~t~~~viIDpgd~----~~-i~~-~l~~-~~-~~i~~Il~TH~H~DHigg~~~l~~-   70 (256)
                      ++.| ++..+..  -.||+|..++  ..+++|.|-.    +. ... ++.+ .. -++++|++||.|.||+|+++.|.+ 
T Consensus       183 ~irit~LGG~~EIGrsc~lv~~~~--~~ILlDcG~~~~~~~~~~~~~~~p~~~~l~~iDAV~LTHaH~DH~G~Lp~L~k~  260 (640)
T 2xr1_A          183 WVRVTALGGCKEVGRSCFLLSTPE--SRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY  260 (640)
T ss_dssp             CCEEEEEECSSSSBCCEEEEECSS--CEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT
T ss_pred             EEEEEEECCCCCCCCCEEEEEECC--CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCCHHHHCCHHHHHHC
T ss_conf             089999478886152779999689--699998888878523357443557768730188999888976763865999852


Q ss_pred             HCCCEEEECCCCCCCC------------------C----------CCCEEEEEHHCCCCC-CCCCCCCCCCCCCCCCCEE
Q ss_conf             0001012000123432------------------3----------322033101001111-2223310255445675226
Q gi|254780583|r   71 FFNCTIFGPLEESSKI------------------P----------GIDHGLSDGDTFDFG-SHPIKIIATPGHTIGHICY  121 (256)
Q Consensus        71 ~~~~~v~~~~~~~~~i------------------~----------~~~~~l~dgd~i~ig-~~~~~vi~tPGHT~g~i~~  121 (256)
                      .+++|||+.......+                  +          ...+.+.-|+.+.++ +++++.+.+ ||++|+.+.
T Consensus       261 g~~~PIY~T~~T~~L~~~ll~d~~~~~~~~~~~~~y~~~~i~~~~~~~i~l~y~e~~~i~~di~Vt~~~a-GHslGsA~~  339 (640)
T 2xr1_A          261 GYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNA-GHILGSAIS  339 (640)
T ss_dssp             TCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEEC-SSSTTCEEE
T ss_pred             CCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCCEEEECCCCEEEEEEC-CCCCCCCCE
T ss_conf             8998899777999999999999998766423468878899998885068558997699579717999726-877865005


Q ss_pred             EE--C--CCCCCCCCCEEEE
Q ss_conf             86--1--4654313770430
Q gi|254780583|r  122 HF--M--NDHFLCVGDTLFS  137 (256)
Q Consensus       122 ~~--~--~~~~lFtGDtLF~  137 (256)
                      ++  .  ..+++||||.-|.
T Consensus       340 ~~~I~~g~~~IvyTGDfr~~  359 (640)
T 2xr1_A          340 HFHIGDGLHNVVFTGDYKYE  359 (640)
T ss_dssp             EEEETTTTEEEEECCSCCSS
T ss_pred             EEEEEECCEEEEECCCCCCC
T ss_conf             78995088269973785667


No 45 
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.04  E-value=2.8e-10  Score=85.96  Aligned_cols=117  Identities=12%  Similarity=-0.003  Sum_probs=78.0

Q ss_pred             EEEEEEECCCCEEEEECCCC------HHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHH------CCCEEEECCCC
Q ss_conf             26999988998499986999------8999999998599643999858984330000011110------00101200012
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAPD------TYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKF------FNCTIFGPLEE   82 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpgd------~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~------~~~~v~~~~~~   82 (256)
                      -|||+.-+  +..+++|+|-      .....+++++.--+|++||+||.|.||+|+++.|.+.      +.+|||+....
T Consensus        16 ~c~lL~~d--~~~ILlDcG~~~~~~~~~~~~~~~~~~~~~IDaVllSHah~DH~GaLP~L~~~~~~~~g~~~pIYaT~pt   93 (717)
T 2i7x_A           16 VGSVVRFD--NVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPV   93 (717)
T ss_dssp             CCEEEEET--TEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHH
T ss_pred             EEEEEEEC--CEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHCCHHHHHHHCCCCCCCCCCEEECHHH
T ss_conf             38999989--9799998998877677445002211265658789977898677546689998513236988889966899


Q ss_pred             CCC-------------------CC-----CC------CEEEEEHHCCCCC----CCCCCCCCCCCCCCCCCEEEEC--CC
Q ss_conf             343-------------------23-----32------2033101001111----2223310255445675226861--46
Q gi|254780583|r   83 SSK-------------------IP-----GI------DHGLSDGDTFDFG----SHPIKIIATPGHTIGHICYHFM--ND  126 (256)
Q Consensus        83 ~~~-------------------i~-----~~------~~~l~dgd~i~ig----~~~~~vi~tPGHT~g~i~~~~~--~~  126 (256)
                      ..-                   .+     .+      -..++=++.+.+.    +++++.+. -||+.|+.++.+.  .+
T Consensus        94 ~~L~~~~l~D~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~l~Y~q~~~l~~~~~gl~it~~~-AGH~LGsa~~~I~~~~~  172 (717)
T 2i7x_A           94 INLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYN-AGVCPGGSIWCISTYSE  172 (717)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEE-CSSSTTCEEEEEECSSC
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEECCCCEEECCCCCCCEEEEEEE-CCCCCCCEEEEEEECCE
T ss_conf             99999999999997531165556678999999998504894799859803788857999965-56323426999982995


Q ss_pred             CCCCCCCE
Q ss_conf             54313770
Q gi|254780583|r  127 HFLCVGDT  134 (256)
Q Consensus       127 ~~lFtGDt  134 (256)
                      +++||||.
T Consensus       173 ~IvytgD~  180 (717)
T 2i7x_A          173 KLVYAKRW  180 (717)
T ss_dssp             EEEECSSC
T ss_pred             EEEEECCC
T ss_conf             99996367


No 46 
>3kl7_A Putative metal-dependent hydrolase; structural genomics, joint center for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=98.77  E-value=3.1e-09  Score=79.12  Aligned_cols=120  Identities=14%  Similarity=0.105  Sum_probs=67.3

Q ss_pred             ECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCC-CEEEEEECCCCHHHHCHHH-HHHHHCCCEEEECCCCCCCCCC
Q ss_conf             0576269999889984999869998999999998599-6439998589843300000-1111000101200012343233
Q gi|254780583|r   11 YHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGW-FLTHIFNTHHHIDHTRANL-NLKKFFNCTIFGPLEESSKIPG   88 (256)
Q Consensus        11 ~~DNy~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~-~i~~Il~TH~H~DHigg~~-~l~~~~~~~v~~~~~~~~~i~~   88 (256)
                      +.-+ +++|..+  +..++|||.....     .-..+ ++++||+||.|+||++... ...++.+++|+++......+..
T Consensus        35 lGha-s~lie~~--g~~ILiDP~~~~~-----~~~~~p~iD~VLiTH~H~DH~~~~~l~~~~~~~~~vi~~~~~~~~l~~  106 (235)
T 3kl7_A           35 IKHG-SLMLTYD--NHSIQVDPVSEYA-----DYTTFPKADIILITHEHGDHLDPKAIQAVEKSDTEIIANENSQKKLGK  106 (235)
T ss_dssp             EETT-EEEEEET--TEEEEESCCTTTC-----CTTSSCCCSEEEECCSSTTTCCHHHHHHHCCTTCEEEECHHHHHHHTC
T ss_pred             EECC-EEEEEEC--CEEEEECCCCCCC-----CHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCEEEECHHHHHHHHH
T ss_conf             8315-9999989--9999988999988-----620089888999799870126722012464269669815899877510


Q ss_pred             CCEEEEEHHCCCCCCCCCCCCCC----C----CCCCC-CCEEEEC--CCCCCCCCCEEEEC
Q ss_conf             22033101001111222331025----5----44567-5226861--46543137704304
Q gi|254780583|r   89 IDHGLSDGDTFDFGSHPIKIIAT----P----GHTIG-HICYHFM--NDHFLCVGDTLFSL  138 (256)
Q Consensus        89 ~~~~l~dgd~i~ig~~~~~vi~t----P----GHT~g-~i~~~~~--~~~~lFtGDtLF~~  138 (256)
                      .......+....+++.+++++.+    +    .|..+ .++|.++  +..+.|+|||-+..
T Consensus       107 ~~~~~~~~~~~~~~~~~I~~~p~~h~~~~~~~~~~~~~~~gyvie~~g~~i~~~GDt~~~~  167 (235)
T 3kl7_A          107 GKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIP  167 (235)
T ss_dssp             SEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSCCSCG
T ss_pred             CCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCHH
T ss_conf             6420257732775572067897341578766767875337789997997999945867757


No 47 
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.69  E-value=5.8e-08  Score=70.90  Aligned_cols=51  Identities=24%  Similarity=0.328  Sum_probs=40.2

Q ss_pred             EEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCC-EEEEEECCCCHHHHCHHHHHHHH
Q ss_conf             2699998899849998699989999999985996-43999858984330000011110
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAPDTYIISKMLREKGWF-LTHIFNTHHHIDHTRANLNLKKF   71 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~~-i~~Il~TH~H~DHigg~~~l~~~   71 (256)
                      +|.+|  +    .+++|.|....+++-+++.|+. +++|++||.|+||++|+..|.++
T Consensus        33 ~s~~i--e----~iL~D~G~~~~~~~n~~~lgId~~daV~lTH~H~DH~gGl~~L~~~   84 (267)
T 3h3e_A           33 FSVLV--D----SVLFDTGKSDVFLKNARKLGIDLPKDVLISHGHYDHAGGLLYLSGK   84 (267)
T ss_dssp             CEEEE--T----TEEECCCSSSHHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGCCSC
T ss_pred             EEEEE--C----CEEEECCCCHHHHHHHHHCCCCHHHCEEEECCCHHHCCCHHHHHHH
T ss_conf             55444--5----2899799997999999984998468489814553110788999876


No 48 
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=98.68  E-value=4.7e-08  Score=71.48  Aligned_cols=66  Identities=24%  Similarity=0.184  Sum_probs=47.1

Q ss_pred             EEEEEEE--CCCCEEEEECCCCHHHHHHHHHHCCC---CEEEEEECCCCHHHHCHHHHHHHH-------CCCEEEECCCC
Q ss_conf             2699998--89984999869998999999998599---643999858984330000011110-------00101200012
Q gi|254780583|r   15 FCILIHN--HKYRLTAAIDAPDTYIISKMLREKGW---FLTHIFNTHHHIDHTRANLNLKKF-------FNCTIFGPLEE   82 (256)
Q Consensus        15 y~YlI~d--~~t~~~viIDpgd~~~i~~~l~~~~~---~i~~Il~TH~H~DHigg~~~l~~~-------~~~~v~~~~~~   82 (256)
                      -+|+|.-  ...+..++||+|+.  +...+.+.++   ++++|++||.|+||++|...|...       -...||++...
T Consensus        21 s~~lv~~~~~~~~~~iL~DcG~g--~~~~l~~~~~~~~~i~~IfiTH~H~DH~~Gl~~ll~~~~~~~~~~~l~i~gP~~~   98 (306)
T 2cbn_A           21 TAILLNLQHPTQSGLWLFDCGEG--TQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGI   98 (306)
T ss_dssp             CEEEEECCCSSCCCEEEECCCTT--HHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTH
T ss_pred             CEEEEEEECCCCCCEEEEECCHH--HHHHHHHHCCCHHHCCEEEEECCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf             88999972688994899999758--9999998189966775899834668980784013310120378987656686778


No 49 
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida KT2440} PDB: 1xto_A
Probab=98.44  E-value=4.7e-07  Score=65.04  Aligned_cols=65  Identities=17%  Similarity=0.060  Sum_probs=45.6

Q ss_pred             EEEEEEECCCCEEEEECCCCHHHHHHHHHHC-------C---CCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCC
Q ss_conf             2699998899849998699989999999985-------9---964399985898433000001111000101200012
Q gi|254780583|r   15 FCILIHNHKYRLTAAIDAPDTYIISKMLREK-------G---WFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEE   82 (256)
Q Consensus        15 y~YlI~d~~t~~~viIDpgd~~~i~~~l~~~-------~---~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~   82 (256)
                      -|.+|.++ ++..++||.|..  +...+.+.       +   -+|++|++||.|.||+.|+..|.+....++|++...
T Consensus        42 ssi~l~~~-g~~~iLiD~G~~--~~~ql~~~~~~~~~~~i~~~~Id~I~lTH~H~DH~~GL~~L~~~~~~~v~~~~~~  116 (321)
T 3jxp_A           42 SSIALSDD-GVHWILCNASPD--IRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQVWCTDMV  116 (321)
T ss_dssp             CEEEEESS-SSSEEEECCCTT--HHHHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGGCCEEEEECHHH
T ss_pred             EEEEEEEC-CCEEEEEECCCC--HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCEEEEEECHHH
T ss_conf             47999979-985999979975--9999999765483334678875589970776124767999961220237606667


No 50 
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=98.31  E-value=2e-06  Score=60.98  Aligned_cols=67  Identities=19%  Similarity=0.191  Sum_probs=45.3

Q ss_pred             CCEEEEEE-ECCCCEEEEECCCCHHHHHHHHHHCCC---CEEEEEECCCCHHHHCHHHHHHHH-------CCCEEEECCC
Q ss_conf             76269999-889984999869998999999998599---643999858984330000011110-------0010120001
Q gi|254780583|r   13 DNFCILIH-NHKYRLTAAIDAPDTYIISKMLREKGW---FLTHIFNTHHHIDHTRANLNLKKF-------FNCTIFGPLE   81 (256)
Q Consensus        13 DNy~YlI~-d~~t~~~viIDpgd~~~i~~~l~~~~~---~i~~Il~TH~H~DHigg~~~l~~~-------~~~~v~~~~~   81 (256)
                      .+-+|++. .+.++..++||+|..-  ...+.+.++   ++++|++||.|+||++|...+...       ...++|++..
T Consensus        18 ~~s~~~v~~~~~~~~~iLiD~G~g~--~~~l~~~~~~~~~i~~I~iTH~H~DH~~Gl~~~~~~~~~~~~~~~~~iy~p~~   95 (320)
T 1y44_A           18 NVTSVALKLLEERRSVWLFDCGEAT--QHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKG   95 (320)
T ss_dssp             CBCEEEEEETTTTSEEEEECCCTTH--HHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTT
T ss_pred             CCCEEEEEEEECCCCEEEEECCHHH--HHHHHHCCCCHHHCCEEEECCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf             7688999998069948999497799--99999839996676689972445665167135555555316776542347701


No 51 
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=98.21  E-value=1.8e-06  Score=61.18  Aligned_cols=91  Identities=19%  Similarity=0.253  Sum_probs=53.6

Q ss_pred             CEEEEEECCCCHHHHCHHHH--HHHH--CCCEEEECCCCCCCCC------CCCEEEEEHHCCCCCCCCCCCCCC------
Q ss_conf             64399985898433000001--1110--0010120001234323------322033101001111222331025------
Q gi|254780583|r   48 FLTHIFNTHHHIDHTRANLN--LKKF--FNCTIFGPLEESSKIP------GIDHGLSDGDTFDFGSHPIKIIAT------  111 (256)
Q Consensus        48 ~i~~Il~TH~H~DHigg~~~--l~~~--~~~~v~~~~~~~~~i~------~~~~~l~dgd~i~ig~~~~~vi~t------  111 (256)
                      ++++||+||.|+||++....  +.+.  ..++++++......+.      .....+..|+.+.+++.++.++.+      
T Consensus       109 ~IDaVLiTH~H~DHld~~~l~~~~~~~~~~~~~~gP~~~~~~l~~~g~~~~~i~~~~~g~~~~v~~~~i~~~~~~~~~~~  188 (360)
T 2wyl_A          109 QIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTAL  188 (360)
T ss_dssp             CCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCCC---
T ss_pred             CCCEEEECCCCHHHCCCHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCHHHEEEECCCCEEEEECCEEEEEEEEEEEEE
T ss_conf             88899979996021780999999854767743865889999998669965515760578657740213577631455556


Q ss_pred             ---CC-C----------CCCCCEEEEC--CCCCCCCCCEEEEC
Q ss_conf             ---54-4----------5675226861--46543137704304
Q gi|254780583|r  112 ---PG-H----------TIGHICYHFM--NDHFLCVGDTLFSL  138 (256)
Q Consensus       112 ---PG-H----------T~g~i~~~~~--~~~~lFtGDtLF~~  138 (256)
                         |+ |          ....+.|.++  +..+.|+|||-+..
T Consensus       189 ~~~p~~~~~~~~~~~~~~~~~~g~~ie~~g~tIy~sGDT~~~~  231 (360)
T 2wyl_A          189 ITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSN  231 (360)
T ss_dssp             ---------------CCTTTBEEEEEEETTEEEEECTTCCCCT
T ss_pred             EECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCH
T ss_conf             6426644466655777877404899971991899926988668


No 52 
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural genomics, PSI-2; 1.80A {Vibrio cholerae o1 biovar eltor str}
Probab=98.09  E-value=7.8e-07  Score=63.61  Aligned_cols=92  Identities=18%  Similarity=0.273  Sum_probs=58.3

Q ss_pred             CEEEEEECCCCHHHHCHH--HHHHHHC--CCEEEECCCCCCCC-----CC-CCEEEEEHHCCCCCCCCCCCCCCC-----
Q ss_conf             643999858984330000--0111100--01012000123432-----33-220331010011112223310255-----
Q gi|254780583|r   48 FLTHIFNTHHHIDHTRAN--LNLKKFF--NCTIFGPLEESSKI-----PG-IDHGLSDGDTFDFGSHPIKIIATP-----  112 (256)
Q Consensus        48 ~i~~Il~TH~H~DHigg~--~~l~~~~--~~~v~~~~~~~~~i-----~~-~~~~l~dgd~i~ig~~~~~vi~tP-----  112 (256)
                      ++++||+||.|+||++..  ..+.+..  .++++++......+     +. ....++.|+.+++++.+++++.+-     
T Consensus       133 ~IDaVLITH~H~DHlD~~tl~~i~~~~~~~~~~igP~~~~~~l~~~gvp~~~ii~l~~gd~~~i~~i~I~~~pa~H~~~~  212 (379)
T 3bv6_A          133 EIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIGDVKIRVLDSFDRTAL  212 (379)
T ss_dssp             CCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCCHHHH
T ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCHHHEEEECCCCEEEECCEEEEEEEEECCCCC
T ss_conf             98889989997111796999999850797459983789999998759966766881478728987779999943536510


Q ss_pred             -----CCCC-----------CCCEEEEC--CCCCCCCCCEEEECC
Q ss_conf             -----4456-----------75226861--465431377043046
Q gi|254780583|r  113 -----GHTI-----------GHICYHFM--NDHFLCVGDTLFSLG  139 (256)
Q Consensus       113 -----GHT~-----------g~i~~~~~--~~~~lFtGDtLF~~g  139 (256)
                           +|..           ..++|.++  +..+.|+|||.+...
T Consensus       213 ~~~p~~~~~~~~~~~~~~~~~~~gylIe~~g~~Iy~sGDT~~~~~  257 (379)
T 3bv6_A          213 VTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNY  257 (379)
T ss_dssp             TCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHH
T ss_conf             014776444676666688765316889719938999679996478


No 53 
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.03  E-value=4.3e-06  Score=58.83  Aligned_cols=102  Identities=19%  Similarity=0.238  Sum_probs=59.9

Q ss_pred             ECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHCCCEEEECCCCCCCCCCCC
Q ss_conf             05762699998899849998699989999999985996439998589843300000111100010120001234323322
Q gi|254780583|r   11 YHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFFNCTIFGPLEESSKIPGID   90 (256)
Q Consensus        11 ~~DNy~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~~~~v~~~~~~~~~i~~~~   90 (256)
                      +.-+ +|+|..+  +..++|||.....   .......++++|++||.|+||...  ++.+. +                .
T Consensus        18 lGhs-~~lIe~~--g~~ILiDP~~~~~---~~~~~~~~~D~VliSH~H~DH~~~--~~~~~-~----------------~   72 (220)
T 1vjn_A           18 FGHA-CFALEME--GKTIVTDPFDESV---GYPIPNVTADVVTESHQHFDHNAH--HLVKG-N----------------F   72 (220)
T ss_dssp             EETT-EEEEEET--TEEEEESCCC--------CCCCCBCSEEECSSCC---CGG--GGCBS-S----------------C
T ss_pred             EECC-EEEEEEC--CEEEEECCCCCCC---CCCCCCCCCCEEEECCCCCCCCCH--HHCCC-C----------------E
T ss_conf             7031-9999989--9999989998877---898777878899966878676751--23146-2----------------6


Q ss_pred             EEEEEHHCCCCCCCCCCCC---CCCCCCC---CCCEEEECCC--CCCCCCCEEEE
Q ss_conf             0331010011112223310---2554456---7522686146--54313770430
Q gi|254780583|r   91 HGLSDGDTFDFGSHPIKII---ATPGHTI---GHICYHFMND--HFLCVGDTLFS  137 (256)
Q Consensus        91 ~~l~dgd~i~ig~~~~~vi---~tPGHT~---g~i~~~~~~~--~~lFtGDtLF~  137 (256)
                      ..+..+...++++.+++.+   |.|.+..   ..+.|+++.+  .+.|+|||-+.
T Consensus        73 ~v~~~~g~~~~~~~~I~~v~a~H~~~~~~~~g~~~~~~ie~~g~~I~~~GDt~~~  127 (220)
T 1vjn_A           73 RVIDRPGAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHV  127 (220)
T ss_dssp             EEECSSEEEEETTEEEEEEEEEEC-------CEEEEEEEEETTEEEEECTTCCSC
T ss_pred             EEECCCCEEEECCEEECCCCCEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCC
T ss_conf             9960456599798221243206518888547875799998499299996898889


No 54 
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, seattle structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus}
Probab=97.88  E-value=2.5e-05  Score=53.81  Aligned_cols=58  Identities=19%  Similarity=0.253  Sum_probs=42.5

Q ss_pred             CCCEEEEEEEC---CCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHH
Q ss_conf             57626999988---998499986999899999999859964399985898433000001111
Q gi|254780583|r   12 HDNFCILIHNH---KYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKK   70 (256)
Q Consensus        12 ~DNy~YlI~d~---~t~~~viIDpgd~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~   70 (256)
                      +-|.|+||...   .++..++||.|..- ..+.++....++++|++||.|+||+.|...|..
T Consensus        61 R~~~S~li~~~~~~~~~~~iLiD~G~~~-~~~~~~~~~~~id~I~lTH~H~DH~~GL~~l~~  121 (293)
T 3md7_A           61 RRRASLLVERYDAEGNNTVVVIDTGPDF-RMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRT  121 (293)
T ss_dssp             BCBCEEEEEEECTTCCEEEEEECCCTTH-HHHHHHHTCCCCSEEECSCCCHHHHTTGGGGHH
T ss_pred             CCCCEEEEEECCCCCCCEEEEEECCCCH-HHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHH
T ss_conf             6334799985467899758999688137-999864234567789984466444557545444


No 55 
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=97.73  E-value=2.2e-05  Score=54.18  Aligned_cols=50  Identities=22%  Similarity=0.275  Sum_probs=36.5

Q ss_pred             EEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHH
Q ss_conf             6999988998499986999899999999859964399985898433000001111
Q gi|254780583|r   16 CILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKK   70 (256)
Q Consensus        16 ~YlI~d~~t~~~viIDpgd~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~   70 (256)
                      .|+.+.+   +.++||+|..  +...+.....+|++|++||.|+||++|...|..
T Consensus        13 t~~~~~~---~~iLiD~G~g--~~~~l~~~~~~i~~IfiTH~H~DHi~gl~~l~~   62 (280)
T 2e7y_A           13 TWIYYSP---ERILFDAGEG--VSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVN   62 (280)
T ss_dssp             EEEEEGG---GTEEEEECTT--HHHHHGGGGGGCCEEECSCCCHHHHTTHHHHHH
T ss_pred             EEEEECC---CEEEEECCHH--HHHHHCCCCCCCCEEEEECCCHHHHCCHHHHHH
T ss_conf             9999899---8799989744--999855552238789991786356467999999


No 56 
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=87.33  E-value=0.15  Score=29.31  Aligned_cols=25  Identities=24%  Similarity=0.369  Sum_probs=20.2

Q ss_pred             CCHHHHHHHCCCCCCCCHHHHHHCC
Q ss_conf             8789998728224678989999738
Q gi|254780583|r  211 STISLEKKVNPFLRIENTSLRKNLN  235 (256)
Q Consensus       211 stl~~Ek~~NPflr~~~~~~~~~~~  235 (256)
                      ||+++|++.||||+.+.+++++.+.
T Consensus       191 tt~~~e~~~Np~l~~~~~~~~~~~~  215 (245)
T 2gcu_A          191 STVGEEMQHNPRLTKDKETFKTIMS  215 (245)
T ss_dssp             EEHHHHHHHCTTTTSCHHHHHHHHH
T ss_pred             CHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             3367565059999867999999997


No 57 
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=78.90  E-value=2.4  Score=21.57  Aligned_cols=63  Identities=17%  Similarity=0.160  Sum_probs=40.4

Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH-HCCCCCCEEECCCCCHHHHHHHHHHCC
Q ss_conf             554456752268614654313770430461344666315677665442-013446502016652045889877502
Q gi|254780583|r  111 TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKI-KSFSDKTHIYFGHEYTENNAYFALSCD  185 (256)
Q Consensus       111 tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl-~~Lp~~t~i~pGHeYt~~nl~Fa~~~~  185 (256)
                      -+||-||++.+-+..   ++..|..|.         +++++.+-+.+. ....+.+++|||--.+.+..-|++.+.
T Consensus       214 r~GHIPGA~n~p~~~---~~~~~~~~k---------~~~el~~~~~~~gi~~~k~vI~YC~sG~~As~~~~al~~l  277 (302)
T 3olh_A          214 EPGHIPGTVNIPFTD---FLSQEGLEK---------SPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLC  277 (302)
T ss_dssp             CCCCCTTCEECCGGG---GBCSSSCBC---------CHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCHHH---HHHCCCCCC---------CHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHC
T ss_conf             578868962177899---500032359---------9999999999749999999999858399999999999986


No 58 
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=72.74  E-value=3.6  Score=20.40  Aligned_cols=63  Identities=19%  Similarity=0.136  Sum_probs=39.2

Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH-HCCCCCCEEECCCCCHHHHHHHHHHCC
Q ss_conf             554456752268614654313770430461344666315677665442-013446502016652045889877502
Q gi|254780583|r  111 TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKI-KSFSDKTHIYFGHEYTENNAYFALSCD  185 (256)
Q Consensus       111 tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl-~~Lp~~t~i~pGHeYt~~nl~Fa~~~~  185 (256)
                      -+||-||++.+-..+   ++..|..|.         +++++.+-++.. ......+++|||.-.+.+.+-|++...
T Consensus       200 r~GhIPGAvnip~~~---~~~~~~~~k---------~~~el~~~~~~~gi~~~k~ii~yC~sG~rAs~~~~~l~~l  263 (296)
T 1rhs_A          200 DSGHIRGSVNMPFMN---FLTEDGFEK---------SPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLC  263 (296)
T ss_dssp             CCCEETTCEECCGGG---GBCTTSCBC---------CHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCHHH---HHCCCCCCC---------CHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHC
T ss_conf             676777865578899---715544579---------9999999999759999999999897199999999999986


No 59 
>3aay_A Putative thiosulfate sulfurtransferase; X-RAY crystallography, sulfurtranserase, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=72.66  E-value=3.5  Score=20.51  Aligned_cols=61  Identities=23%  Similarity=0.274  Sum_probs=37.9

Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH-HCCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf             554456752268614654313770430461344666315677665442-0134465020166520458898775
Q gi|254780583|r  111 TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKI-KSFSDKTHIYFGHEYTENNAYFALS  183 (256)
Q Consensus       111 tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl-~~Lp~~t~i~pGHeYt~~nl~Fa~~  183 (256)
                      -+||-||++.+-+.+   ++..|..|.         +.+++.+-+... ......+++|||.-.+.+..-|++.
T Consensus       186 r~GhIPGA~nip~~~---~~~~~~~~~---------~~~el~~~~~~~gi~~~k~vi~yC~sG~~As~~~~~l~  247 (277)
T 3aay_A          186 RPGHIPGAINVPWSR---AANEDGTFK---------SDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLR  247 (277)
T ss_dssp             CCSBCTTCEECCGGG---GBCTTSCBC---------CHHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHH---CCCCCCCCC---------CHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf             587657876774665---058763434---------28999999998189989998998698199999999999


No 60 
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=61.66  E-value=7.4  Score=18.39  Aligned_cols=60  Identities=18%  Similarity=0.238  Sum_probs=37.3

Q ss_pred             CCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH-HCCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf             54456752268614654313770430461344666315677665442-0134465020166520458898775
Q gi|254780583|r  112 PGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKI-KSFSDKTHIYFGHEYTENNAYFALS  183 (256)
Q Consensus       112 PGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl-~~Lp~~t~i~pGHeYt~~nl~Fa~~  183 (256)
                      +||-||++.+-+.+   ++..|..|.         +.+++.+-+... ......+++||+--.+.+.+-|++.
T Consensus       194 ~GhIPgA~nip~~~---~~~~~~~~~---------~~~el~~~~~~~gi~~~k~vI~yC~sG~~A~~~~~~L~  254 (285)
T 1uar_A          194 AGHIPGAKNIPWAK---AVNPDGTFK---------SAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLK  254 (285)
T ss_dssp             CSBCTTCEECCGGG---GBCTTSCBC---------CHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHH
T ss_pred             CEEECCCCCCHHHH---HCCCCCCCC---------CHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf             20768852032766---247663433---------16999999998299999999998798799999999999


No 61 
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=60.12  E-value=6.5  Score=18.78  Aligned_cols=27  Identities=4%  Similarity=-0.116  Sum_probs=14.2

Q ss_pred             EEEEEECCCEEEEEEECC--CCEEEEECC
Q ss_conf             530110576269999889--984999869
Q gi|254780583|r    6 IAISLYHDNFCILIHNHK--YRLTAAIDA   32 (256)
Q Consensus         6 i~ip~~~DNy~YlI~d~~--t~~~viIDp   32 (256)
                      +.+..|.|-=+|+-..+.  ++.+++|-.
T Consensus        59 ~~~~~FpDGE~~v~i~e~Vrg~dV~iiqs   87 (379)
T 2ji4_A           59 VQVYQEPNRETRVQIQESVRGKDVFIIQT   87 (379)
T ss_dssp             EEEEECTTSCEEEEECSCCTTCEEEEECC
T ss_pred             EEEEECCCCCEEEEECCCCCCCCEEEEEC
T ss_conf             38898799978998798768983899968


No 62 
>2elf_A Protein translation elongation factor 1A; tRNA, pyrrolysine, structural genomics, NPPSFA; HET: CIT; 1.70A {Methanosarcina mazei}
Probab=53.76  E-value=2.1  Score=21.90  Aligned_cols=10  Identities=20%  Similarity=0.039  Sum_probs=4.2

Q ss_pred             HHHHHHCCCC
Q ss_conf             9999985996
Q gi|254780583|r   39 SKMLREKGWF   48 (256)
Q Consensus        39 ~~~l~~~~~~   48 (256)
                      +..+...|.+
T Consensus       104 l~l~~~lgv~  113 (370)
T 2elf_A          104 IIALDLLGFK  113 (370)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHCCCC
T ss_conf             9999975998


No 63 
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genomics; HET: MSE ACO; 1.90A {Bacillus anthracis} PDB: 3n0s_A* 3kzl_A* 3n0m_A* 3e4f_A*
Probab=48.46  E-value=14  Score=16.68  Aligned_cols=30  Identities=17%  Similarity=0.110  Sum_probs=22.0

Q ss_pred             CHHHHHHHHHHCCCCEEEEEECCCCHHHHC
Q ss_conf             989999999985996439998589843300
Q gi|254780583|r   34 DTYIISKMLREKGWFLTHIFNTHHHIDHTR   63 (256)
Q Consensus        34 d~~~i~~~l~~~~~~i~~Il~TH~H~DHig   63 (256)
                      -.+.+.+.+++.|++-..+++-|.-..=+|
T Consensus        16 T~~~l~~~l~~LGI~~gd~v~VHssl~~lg   45 (268)
T 3ijw_A           16 TIKTITNDLRKLGLKKGMTVIVHSSLSSIG   45 (268)
T ss_dssp             CHHHHHHHHHHHTCCTTCEEEEEECTGGGC
T ss_pred             CHHHHHHHHHHCCCCCCCEEEEECCHHHHC
T ss_conf             699999999981989949999977868839


No 64 
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=46.81  E-value=14  Score=16.52  Aligned_cols=98  Identities=17%  Similarity=0.162  Sum_probs=51.9

Q ss_pred             HHHHHCCCCEEEEEECCCCHHHHCHHHHHHHH-------CCCEEEECCCCC----------------------CCCCCCC
Q ss_conf             99998599643999858984330000011110-------001012000123----------------------4323322
Q gi|254780583|r   40 KMLREKGWFLTHIFNTHHHIDHTRANLNLKKF-------FNCTIFGPLEES----------------------SKIPGID   90 (256)
Q Consensus        40 ~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~-------~~~~v~~~~~~~----------------------~~i~~~~   90 (256)
                      ..+++.++....|+.+-.+...  |...|.+.       -++-+.|..+..                      ..+|+.+
T Consensus       124 ~~~~~~g~~~~~v~~vSa~~~~--g~~~L~~~i~~~~~~~~v~vvG~~NvGKSTLIN~L~~~~~~~~~~~~~vs~~PGtT  201 (368)
T 3h2y_A          124 YSAKQLGLKPEDVFLISAAKGQ--GIAELADAIEYYRGGKDVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFPGTT  201 (368)
T ss_dssp             HHHHHTTCCCSEEEECCTTTCT--THHHHHHHHHHHHTTSCEEEEEBTTSSHHHHHHHHHHHHTTSCSSCCEEECCC---
T ss_pred             HHHHHCCCCCCCEEECCCCCCC--CHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEE
T ss_conf             9999749986404650332576--78999999987516865999757875637888887653034556212456999883


Q ss_pred             EEEEEHHCCCCCCCCCCCCCCCCCC-CCCCEEEECCC---------------CCCCCCCEEEECCCCCC
Q ss_conf             0331010011112223310255445-67522686146---------------54313770430461344
Q gi|254780583|r   91 HGLSDGDTFDFGSHPIKIIATPGHT-IGHICYHFMND---------------HFLCVGDTLFSLGCGRI  143 (256)
Q Consensus        91 ~~l~dgd~i~ig~~~~~vi~tPGHT-~g~i~~~~~~~---------------~~lFtGDtLF~~g~Gr~  143 (256)
                      ..+   ..+.++. ...++.|||-. ++++.=++..+               -.+..|-+||.||.+|+
T Consensus       202 ~~~---~~i~l~~-~~~l~DTPGi~~~~~~~~~l~~~~lk~~~p~k~i~p~t~~l~~gqsl~igGL~ri  266 (368)
T 3h2y_A          202 LDL---IDIPLDE-ESSLYDTPGIINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARF  266 (368)
T ss_dssp             -CE---EEEESSS-SCEEEECCCBCCTTSGGGGSCHHHHHHHSCSSCCCCEEEEECTTEEEEETTTEEE
T ss_pred             CCE---EEEECCC-CCEEEECCCCCCCCHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCEEEECCEEEE
T ss_conf             774---8998299-9789989595736430343699898753675532754999679967997327999


No 65 
>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B}
Probab=46.15  E-value=15  Score=16.46  Aligned_cols=44  Identities=11%  Similarity=0.035  Sum_probs=22.5

Q ss_pred             EEEEEEECCCEEEEEEECC--CCEEEEECCC--CH-H------HHHHHHHHCCCC
Q ss_conf             4530110576269999889--9849998699--98-9------999999985996
Q gi|254780583|r    5 NIAISLYHDNFCILIHNHK--YRLTAAIDAP--DT-Y------IISKMLREKGWF   48 (256)
Q Consensus         5 ~i~ip~~~DNy~YlI~d~~--t~~~viIDpg--d~-~------~i~~~l~~~~~~   48 (256)
                      .+.+..|.|.-.|+-..+.  ++.+++|=..  .. +      .+++.+++.+.+
T Consensus        33 ~~~~~~FpDGE~~vri~~~vrg~dV~iiqs~~~~~nd~lmeLll~~~a~r~~gA~   87 (319)
T 3dah_A           33 KAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASAG   87 (319)
T ss_dssp             CEEEEECTTSCEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTBS
T ss_pred             EEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             3488988999788877897679808999379968637899999999999874977


No 66 
>1kid_A Groel (HSP60 class); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Escherichia coli} SCOP: c.8.5.1 PDB: 1fya_A 1fy9_A 1la1_A 1jon_A 1dk7_A 1dkd_A
Probab=44.20  E-value=2.3  Score=21.72  Aligned_cols=87  Identities=17%  Similarity=0.207  Sum_probs=55.4

Q ss_pred             CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHH
Q ss_conf             12223310255445675226861465431377043046134466631567766544201344650201665204588987
Q gi|254780583|r  102 GSHPIKIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYFA  181 (256)
Q Consensus       102 g~~~~~vi~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl~Fa  181 (256)
                      |.+.+.++..||.-..---  .-++=+++||-++|....|--++.--.+++-|-+|+..-.++|.|..|+.         
T Consensus        96 g~l~v~aVkaPgfG~~r~~--~LeDLAilTGa~vi~~~~g~~l~~~~~~~LGsa~kv~itk~~T~ii~g~g---------  164 (203)
T 1kid_A           96 GIVKVAAVKAPGFGDRRKA--MLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVG---------  164 (203)
T ss_dssp             TSCCEEEEECCSCHHHHHH--HHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECC---------
T ss_pred             CCCCEEEECCCCCCHHHHH--HHHHHHHHHCCEEECHHCCCCCCCCCHHHCCCCCEEEECCCCEEEECCCC---------
T ss_conf             8753246438887767899--99999998399986510277624399868897558998798708975899---------


Q ss_pred             HHCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             75023447899999999988857
Q gi|254780583|r  182 LSCDPHNLELQKYCSKVKSMRSQ  204 (256)
Q Consensus       182 ~~~~p~n~~~~~~~~~~~~~~~~  204 (256)
                           +++.+.++..++++..++
T Consensus       165 -----~~~~I~~Ri~~Lk~~l~~  182 (203)
T 1kid_A          165 -----EEAAIQGRVAQIRQQIEE  182 (203)
T ss_dssp             -----CHHHHHHHHHHHHHHHHH
T ss_pred             -----CHHHHHHHHHHHHHHHHH
T ss_conf             -----989999999999999998


No 67 
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, structural genomics; 2.10A {Mycobacterium tuberculosis}
Probab=43.54  E-value=16  Score=16.20  Aligned_cols=59  Identities=19%  Similarity=0.228  Sum_probs=33.1

Q ss_pred             CCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf             544567522686146543137704304613446663156776654420134465020166520458898775
Q gi|254780583|r  112 PGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYFALS  183 (256)
Q Consensus       112 PGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl~~Lp~~t~i~pGHeYt~~nl~Fa~~  183 (256)
                      .||-||++.+-+.+   ++..|..|.         +.+++.+-++.| .....+++||+--.+.+..-|++.
T Consensus       222 ~GHIPgAvnip~~~---~~d~~~~~k---------~~~eL~~~~~~i-~~dk~vi~yC~sG~~Aa~~~~~L~  280 (318)
T 3hzu_A          222 AGHIPTAVHIPWGK---AADESGRFR---------SREELERLYDFI-NPDDQTVVYCRIGERSSHTWFVLT  280 (318)
T ss_dssp             CSBCTTCEECCGGG---GBCTTSCBC---------CHHHHHHHTTTC-CTTCCCEEECSSSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHH---HCCCCCCCC---------CHHHHHHHHHCC-CCCCCEEEEECCCHHHHHHHHHHH
T ss_conf             11526743223063---258641108---------899999998548-999988999798199999999999


No 68 
>2h06_A Ribose-phosphate pyrophosphokinase I; PRS1, PRPP synthetase 1, phosphoribosyl pyrophosphate synthetase 1, transferase; 2.20A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h07_A 2h08_A
Probab=41.52  E-value=17  Score=16.05  Aligned_cols=27  Identities=0%  Similarity=-0.056  Sum_probs=15.5

Q ss_pred             EEEEEECCCEEEEEEECC--CCEEEEECC
Q ss_conf             530110576269999889--984999869
Q gi|254780583|r    6 IAISLYHDNFCILIHNHK--YRLTAAIDA   32 (256)
Q Consensus         6 i~ip~~~DNy~YlI~d~~--t~~~viIDp   32 (256)
                      +.+..|.|.=.|+-..+.  +..+++|-+
T Consensus        30 ~~~~~F~dGE~~v~i~e~vrg~dV~iiqs   58 (326)
T 2h06_A           30 VVTKKFSNQETCVEIGESVRGEDVYIVQS   58 (326)
T ss_dssp             EEEEECSSSCEEEEECSCCBTCEEEEECC
T ss_pred             EEEEECCCCCEEEEECCCCCCCCEEEEEC
T ss_conf             28898899977888799878985899958


No 69 
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=39.75  E-value=18  Score=15.83  Aligned_cols=28  Identities=7%  Similarity=-0.010  Sum_probs=15.4

Q ss_pred             EEEEEEECCCEEEEEEECC--CCEEEEECC
Q ss_conf             4530110576269999889--984999869
Q gi|254780583|r    5 NIAISLYHDNFCILIHNHK--YRLTAAIDA   32 (256)
Q Consensus         5 ~i~ip~~~DNy~YlI~d~~--t~~~viIDp   32 (256)
                      .+.+..|.|-=.|+-..+.  ++.+++|-.
T Consensus        35 ~~~~~~FpDGE~~v~i~~~vrg~~V~ivqs   64 (317)
T 1dku_A           35 KCSVTRFSDGEVQINIEESIRGCDCYIIQS   64 (317)
T ss_dssp             CEEEEECTTSCEEEEECSCCTTCEEEEECC
T ss_pred             EEEEEECCCCCEEEEECCCCCCCEEEEEEC
T ss_conf             037888899977998788778986999967


No 70 
>2ewc_A Conserved hypothetical protein; YJGF proteins family, COG0251, putative translation initiation inhibitor, structural genomics, PSI; 2.15A {Streptococcus pyogenes m1 gas} SCOP: d.79.1.1
Probab=38.80  E-value=11  Score=17.22  Aligned_cols=12  Identities=25%  Similarity=0.431  Sum_probs=4.8

Q ss_pred             CCCCCEEEECCC
Q ss_conf             313770430461
Q gi|254780583|r  129 LCVGDTLFSLGC  140 (256)
Q Consensus       129 lFtGDtLF~~g~  140 (256)
                      +-.||++|.+|+
T Consensus        19 V~~G~~vflsg~   30 (126)
T 2ewc_A           19 VEAGDFYYLNYC   30 (126)
T ss_dssp             EEETTEEEEEEE
T ss_pred             EEECCEEEECCC
T ss_conf             999999997586


No 71 
>2huo_A Inositol oxygenase; protein-substrate complex, HD domain fold, oxidoreductase; HET: INS; 2.00A {Mus musculus} SCOP: a.211.1.4 PDB: 3bxd_A*
Probab=37.64  E-value=6.6  Score=18.70  Aligned_cols=27  Identities=37%  Similarity=0.770  Sum_probs=22.7

Q ss_pred             CCCCCCEEEECCCCCCCCCCEEEECCCC
Q ss_conf             4567522686146543137704304613
Q gi|254780583|r  114 HTIGHICYHFMNDHFLCVGDTLFSLGCG  141 (256)
Q Consensus       114 HT~g~i~~~~~~~~~lFtGDtLF~~g~G  141 (256)
                      |..|.|.+++.++.+..+||| |.-||-
T Consensus       127 HDLGKvl~~~ge~QW~vVGDT-fpvGC~  153 (289)
T 2huo_A          127 HDLGKIMALWGEPQWAVVGDT-FPVGCR  153 (289)
T ss_dssp             TTGGGGGGGGTCCGGGTSSCC-CBSSSC
T ss_pred             HHHHHHHHCCCCCCCEECCCC-EEECCC
T ss_conf             553246420578750332673-042257


No 72 
>3k0t_A Endoribonuclease L-PSP, putative; glucose binding, ER stressor, sugar binding protein; HET: BGC; 2.10A {Pseudomonas syringae PV}
Probab=37.53  E-value=16  Score=16.22  Aligned_cols=46  Identities=17%  Similarity=0.177  Sum_probs=20.5

Q ss_pred             CCCCCCCCCCCEEEECCCCCCCCCCEEEECCC-CC------CCCCCHHHHHHHHHHH
Q ss_conf             02554456752268614654313770430461-34------4666315677665442
Q gi|254780583|r  109 IATPGHTIGHICYHFMNDHFLCVGDTLFSLGC-GR------IFEDSYAEMFESLEKI  158 (256)
Q Consensus       109 i~tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~-Gr------~~~G~~~~l~~Sl~kl  158 (256)
                      +.+|+ .|-.+.-|.+   ++-+|++||.+|. |.      +.++..+|..+.++.|
T Consensus        23 i~~~~-aP~p~gpYs~---av~~g~~iyvSGqi~~d~~~~~~~~~~~~Q~~~~~~ni   75 (143)
T 3k0t_A           23 ITSDK-APAAIGPYSQ---AIKAGNTVYMSGQIPLDPSTMELVEGIEAQITQVFENL   75 (143)
T ss_dssp             ECCTT-SCCCCSSCCS---EEEETTEEEEEEECSBCTTTCSBCSSHHHHHHHHHHHH
T ss_pred             ECCCC-CCCCCCCCCC---EEEECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             76888-9988798778---59999999991516847998570587999999999989


No 73 
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=37.16  E-value=20  Score=15.57  Aligned_cols=30  Identities=13%  Similarity=0.076  Sum_probs=21.8

Q ss_pred             CHHHHHHHHHHCCCCEEEEEECCCCHHHHC
Q ss_conf             989999999985996439998589843300
Q gi|254780583|r   34 DTYIISKMLREKGWFLTHIFNTHHHIDHTR   63 (256)
Q Consensus        34 d~~~i~~~l~~~~~~i~~Il~TH~H~DHig   63 (256)
                      --+.+.+.|++.|++-..+++-|.-..-+|
T Consensus        14 Tk~~l~~~L~~LGI~~gd~v~vHssl~~~g   43 (273)
T 2nyg_A           14 TKQSITEDLKALGLKKGMTVLVHSSLSSIG   43 (273)
T ss_dssp             CHHHHHHHHHHHTCCTTCEEEEEECSGGGC
T ss_pred             CHHHHHHHHHHCCCCCCCEEEEECCHHHHC
T ss_conf             899999999982989969999975778838


No 74 
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.5A {Homo sapiens}
Probab=35.52  E-value=9.5  Score=17.69  Aligned_cols=82  Identities=18%  Similarity=0.235  Sum_probs=35.6

Q ss_pred             CCCHHHHCHHHHHHHHCCCEEEECCCCCCCCCC--CCEEEEEHHCCCCCCCCC--CCC----CCCCCCCCCC-EEEECCC
Q ss_conf             898433000001111000101200012343233--220331010011112223--310----2554456752-2686146
Q gi|254780583|r   56 HHHIDHTRANLNLKKFFNCTIFGPLEESSKIPG--IDHGLSDGDTFDFGSHPI--KII----ATPGHTIGHI-CYHFMND  126 (256)
Q Consensus        56 H~H~DHigg~~~l~~~~~~~v~~~~~~~~~i~~--~~~~l~dgd~i~ig~~~~--~vi----~tPGHT~g~i-~~~~~~~  126 (256)
                      |+|.-|+.|..--.+....+-.....-..++++  ....++.||.++-|+.-+  +..    ..+--..|-| .+++.+.
T Consensus         2 ~~~~~~s~gi~~~~~n~~~~~~~~~~i~aP~~G~V~~i~V~~Gd~V~~G~~l~~iEsmK~~~~v~Ap~~G~V~~i~v~~G   81 (94)
T 2jku_A            2 HHHHHHSSGVDLGTENLYFQSMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAG   81 (94)
T ss_dssp             ----------------------CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC-----------------------
T ss_pred             CCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCCCCEECCCCEEEEEECCCCCEEEEECCCEEEEEEEECCC
T ss_conf             64334335557777404112786898989999689899818999995898799998036538999388999989986897


Q ss_pred             CCCCCCCEEEE
Q ss_conf             54313770430
Q gi|254780583|r  127 HFLCVGDTLFS  137 (256)
Q Consensus       127 ~~lFtGDtLF~  137 (256)
                      ..+=.||.||.
T Consensus        82 d~V~~G~~L~~   92 (94)
T 2jku_A           82 DTVGEGDLLVE   92 (94)
T ss_dssp             -----------
T ss_pred             CEECCCCEEEE
T ss_conf             99799999999


No 75 
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein structure initiative; 1.49A {Pseudomonas aeruginosa}
Probab=34.36  E-value=16  Score=16.21  Aligned_cols=13  Identities=23%  Similarity=0.245  Sum_probs=6.1

Q ss_pred             HHHHHHHCCCCEE
Q ss_conf             9999998599643
Q gi|254780583|r   38 ISKMLREKGWFLT   50 (256)
Q Consensus        38 i~~~l~~~~~~i~   50 (256)
                      +...|++.|..+.
T Consensus        46 i~~~L~~aG~~~~   58 (122)
T 3k12_A           46 IDRLLQSVGSDRG   58 (122)
T ss_dssp             HHHHHHHTTCCGG
T ss_pred             HHHHHHHCCCCCC
T ss_conf             9999975799611


No 76 
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=32.53  E-value=24  Score=15.09  Aligned_cols=12  Identities=8%  Similarity=0.077  Sum_probs=5.2

Q ss_pred             HHHHHHHHHCCC
Q ss_conf             999999998599
Q gi|254780583|r   36 YIISKMLREKGW   47 (256)
Q Consensus        36 ~~i~~~l~~~~~   47 (256)
                      +.|++.+++.+.
T Consensus       120 ~~Ii~~A~~~~~  131 (554)
T 1w96_A          120 DLIVDIAERADV  131 (554)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHHCC
T ss_conf             999999999496


No 77 
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Salmonella typhimurium}
Probab=31.21  E-value=20  Score=15.63  Aligned_cols=14  Identities=21%  Similarity=0.318  Sum_probs=7.4

Q ss_pred             HHHHHHHCCCCEEE
Q ss_conf             99999985996439
Q gi|254780583|r   38 ISKMLREKGWFLTH   51 (256)
Q Consensus        38 i~~~l~~~~~~i~~   51 (256)
                      +.+.|++.|..+..
T Consensus        48 i~~iL~~aG~~~~d   61 (124)
T 3gtz_A           48 IDAVLEKQGSSKSR   61 (124)
T ss_dssp             HHHHHHHTTCCGGG
T ss_pred             HHHHHHHCCCCHHH
T ss_conf             99999985999899


No 78 
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=31.01  E-value=7.2  Score=18.49  Aligned_cols=27  Identities=37%  Similarity=0.794  Sum_probs=19.7

Q ss_pred             CCCCCCEEEECCCCCCCCCCEEEECCCC
Q ss_conf             4567522686146543137704304613
Q gi|254780583|r  114 HTIGHICYHFMNDHFLCVGDTLFSLGCG  141 (256)
Q Consensus       114 HT~g~i~~~~~~~~~lFtGDtLF~~g~G  141 (256)
                      |..|.|.+++.+..+..+||| |.-||-
T Consensus        88 HDLGKvl~~~ge~qW~vVGDT-fpvGC~  114 (250)
T 2ibn_A           88 HDLGKVLALFGEPQWAVVGDT-FPVGCR  114 (250)
T ss_dssp             TTGGGHHHHTTCCGGGTSSCC-CBSSSC
T ss_pred             HHHHHHHHHCCCCCEEECCCC-CEEECC
T ss_conf             677688886378860341674-043057


No 79 
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=30.60  E-value=26  Score=14.89  Aligned_cols=23  Identities=4%  Similarity=-0.008  Sum_probs=17.3

Q ss_pred             CCCCEEECCCCCHHHHHHHHHHC
Q ss_conf             44650201665204588987750
Q gi|254780583|r  162 SDKTHIYFGHEYTENNAYFALSC  184 (256)
Q Consensus       162 p~~t~i~pGHeYt~~nl~Fa~~~  184 (256)
                      ...+++||+.-++.+-..|++..
T Consensus       223 ~k~ivvyC~sG~rA~~~~~~L~~  245 (271)
T 1e0c_A          223 DKEIVTHCQTHHRSGLTYLIAKA  245 (271)
T ss_dssp             TSEEEEECSSSSHHHHHHHHHHH
T ss_pred             CCCEEEECCCHHHHHHHHHHHHH
T ss_conf             99899988878999999999998


No 80 
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=30.19  E-value=26  Score=14.84  Aligned_cols=65  Identities=18%  Similarity=0.241  Sum_probs=36.3

Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH----HCCCC--CCEEECCCCCHHHHHHHHHHC
Q ss_conf             554456752268614654313770430461344666315677665442----01344--650201665204588987750
Q gi|254780583|r  111 TPGHTIGHICYHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKI----KSFSD--KTHIYFGHEYTENNAYFALSC  184 (256)
Q Consensus       111 tPGHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl----~~Lp~--~t~i~pGHeYt~~nl~Fa~~~  184 (256)
                      -+||=||++.+-+.+  .+      ...+-|+.|- +++++.+-+.++    ...++  .+++|||--.+.+..-|++..
T Consensus       198 r~GHIPGAiniP~~~--~l------~~~~~~~~lk-s~eeLr~~~~~l~~~~g~~~~~~~iI~YCgsG~rAs~~~~aL~~  268 (373)
T 1okg_A          198 MPGHIEGARNLPYTS--HL------VTRGDGKVLR-SEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHH  268 (373)
T ss_dssp             SSSCSTTCEECCGGG--GE------ECCSSSCEEC-CHHHHHHHHHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHH--HC------CCCCCCCEEC-CHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf             589757853054698--60------2178998559-99999999999997558988899699999639999999999998


No 81 
>3lme_A Possible translation initiation inhibitor; structural genomics, RPA2473, PSI-2, protein structure initiative; 2.74A {Rhodopseudomonas palustris}
Probab=29.59  E-value=27  Score=14.78  Aligned_cols=12  Identities=33%  Similarity=0.274  Sum_probs=6.3

Q ss_pred             CCCCCCEEEECC
Q ss_conf             431377043046
Q gi|254780583|r  128 FLCVGDTLFSLG  139 (256)
Q Consensus       128 ~lFtGDtLF~~g  139 (256)
                      ++-+||++|.+|
T Consensus        22 av~~g~~vfvSG   33 (138)
T 3lme_A           22 GARAGDFVFIGG   33 (138)
T ss_dssp             EEEETTEEEEEE
T ss_pred             EEEECCEEEECC
T ss_conf             699999999887


No 82 
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=28.51  E-value=16  Score=16.16  Aligned_cols=77  Identities=18%  Similarity=0.332  Sum_probs=42.2

Q ss_pred             CCCCHHHHCHHHHHHHHCCCE-EEECCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCC-CC-CCCCCCCEEEECCCCCCCC
Q ss_conf             589843300000111100010-12000123432332203310100111122233102-55-4456752268614654313
Q gi|254780583|r   55 THHHIDHTRANLNLKKFFNCT-IFGPLEESSKIPGIDHGLSDGDTFDFGSHPIKIIA-TP-GHTIGHICYHFMNDHFLCV  131 (256)
Q Consensus        55 TH~H~DHigg~~~l~~~~~~~-v~~~~~~~~~i~~~~~~l~dgd~i~ig~~~~~vi~-tP-GHT~g~i~~~~~~~~~lFt  131 (256)
                      .|+|.-|..|-..|.-. +.+ +..++.|.-.+  .-..+..|+.+.+++.++.+.. .| ||-     +-+.+   +-.
T Consensus         4 ~~~~~~~~~~~~~ly~~-~~~~I~l~p~DNVaV--Al~dl~~G~~v~~~~~~i~l~~~Ip~GHK-----iAl~d---I~~   72 (105)
T 3k3s_A            4 SHHHHHHSSGRENLYFQ-GMQYIKIHALDNVAV--ALADLAEGTEVSVDNQTVTLRQDVARGHK-----FALTD---IAK   72 (105)
T ss_dssp             ------------------CCSEECCSTTCSEEE--ESSCBCTTCEEEETTEEEECSSCBCTTCE-----EESSC---BCT
T ss_pred             CCCCCCCCCCHHHCCCC-CCCEEEECCCCCEEE--ECCCCCCCCEEEECCEEEEECCCCCCCCE-----EEEEE---CCC
T ss_conf             54222145662102003-688888389998999--67636999999559917998866888899-----98410---379


Q ss_pred             CCEEEECC--CCC
Q ss_conf             77043046--134
Q gi|254780583|r  132 GDTLFSLG--CGR  142 (256)
Q Consensus       132 GDtLF~~g--~Gr  142 (256)
                      ||.+..-|  +|+
T Consensus        73 Ge~IiKYG~~IG~   85 (105)
T 3k3s_A           73 GANVIKYGLPIGY   85 (105)
T ss_dssp             TCEEEETTEEEEE
T ss_pred             CCEEEECCCEEEE
T ss_conf             9975999959388


No 83 
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structural proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus dsm 4304}
Probab=28.29  E-value=9.4  Score=17.73  Aligned_cols=52  Identities=21%  Similarity=0.278  Sum_probs=29.8

Q ss_pred             CCCCCEEEECCCC-CCCCCCEEEECCCCCCCCC-CH-HHHHHHHHHHHCCCCCCE
Q ss_conf             5675226861465-4313770430461344666-31-567766544201344650
Q gi|254780583|r  115 TIGHICYHFMNDH-FLCVGDTLFSLGCGRIFED-SY-AEMFESLEKIKSFSDKTH  166 (256)
Q Consensus       115 T~g~i~~~~~~~~-~lFtGDtLF~~g~Gr~~~G-~~-~~l~~Sl~kl~~Lp~~t~  166 (256)
                      .+|.|+||-+... ++|-|+|=++.+-+|+-.+ +. ......+++|..+++...
T Consensus        93 ~~GDIaywp~g~~iaIfyG~tp~S~~eirlas~vN~~Gki~~~l~~L~~i~~g~~  147 (153)
T 2nnz_A           93 ELGDVAYWIPGKAICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVADGES  147 (153)
T ss_dssp             CTTEEEEETTTTEEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCCSSEE
T ss_pred             CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCE
T ss_conf             6672899689998999968845567862237661699997777899961899976


No 84 
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=27.63  E-value=16  Score=16.24  Aligned_cols=99  Identities=17%  Similarity=0.196  Sum_probs=51.0

Q ss_pred             HHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHC-------CCEEEECCCC---------------------CCCCCCCC
Q ss_conf             9999985996439998589843300000111100-------0101200012---------------------34323322
Q gi|254780583|r   39 SKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFF-------NCTIFGPLEE---------------------SSKIPGID   90 (256)
Q Consensus        39 ~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~~-------~~~v~~~~~~---------------------~~~i~~~~   90 (256)
                      .+.+++.++....+.++-.+-.  .|...|.+.-       ++-+.|..+.                     ....|+.+
T Consensus       125 ~~~~~~~g~~~~~v~l~Sa~~~--~gi~~l~~~i~~~~~~~~v~vvG~~NvGKSTLiN~L~~~~~~k~~~~~vs~~PGtT  202 (369)
T 3ec1_A          125 RRMAEELGLCPVDVCLVSAAKG--IGMAKVMEAINRYREGGDVYVVGCTNVGKSTFINRIIEEATGKGNVITTSYFPGTT  202 (369)
T ss_dssp             HHHHHTTTCCCSEEEECBTTTT--BTHHHHHHHHHHHHTTSCEEEECCTTSSHHHHHHHHHHHHHHTTCCCEEEECTTSS
T ss_pred             HHHHHHCCCCCCEEEECCCCCC--CCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCEE
T ss_conf             9999875998402676575457--68899999998741586499946887358899987756640356442207999736


Q ss_pred             EEEEEHHCCCCCCCCCCCCCCCCC-CCCCCEEEECCCC---------------CCCCCCEEEECCCCCC
Q ss_conf             033101001111222331025544-5675226861465---------------4313770430461344
Q gi|254780583|r   91 HGLSDGDTFDFGSHPIKIIATPGH-TIGHICYHFMNDH---------------FLCVGDTLFSLGCGRI  143 (256)
Q Consensus        91 ~~l~dgd~i~ig~~~~~vi~tPGH-T~g~i~~~~~~~~---------------~lFtGDtLF~~g~Gr~  143 (256)
                      ..+.   .+.++ ....++.|||= .++++.-++..+.               .+..|-+||.||.+|+
T Consensus       203 ~~~~---~i~l~-~~~~l~DTPGi~~~~~~~~~l~~~~lk~l~p~k~i~p~~~~l~~gqsl~igGL~ri  267 (369)
T 3ec1_A          203 LDMI---EIPLE-SGATLYDTPGIINHHQMAHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARL  267 (369)
T ss_dssp             CEEE---EEECS-TTCEEEECCSCCCCSSGGGGSCTTTHHHHSCSSCCCCEEEEECTTEEEEETTTEEE
T ss_pred             EEEE---EEECC-CCCEEEECCCCCCCCHHHHHCCHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEE
T ss_conf             1179---99969-99889989597876430333899898525877650761899689978998027988


No 85 
>2c40_A Inosine-uridine preferring nucleoside hydrolase family protein; spine; 2.2A {Bacillus anthracis}
Probab=27.55  E-value=29  Score=14.55  Aligned_cols=54  Identities=9%  Similarity=-0.032  Sum_probs=31.7

Q ss_pred             EEE--CCC--CHHHHHHHHHHCCCCEEEEEECCC--CHHHHCHHH-HHH---HHCCCEEEECCC
Q ss_conf             998--699--989999999985996439998589--843300000-111---100010120001
Q gi|254780583|r   28 AAI--DAP--DTYIISKMLREKGWFLTHIFNTHH--HIDHTRANL-NLK---KFFNCTIFGPLE   81 (256)
Q Consensus        28 viI--Dpg--d~~~i~~~l~~~~~~i~~Il~TH~--H~DHigg~~-~l~---~~~~~~v~~~~~   81 (256)
                      +||  |||  |+-.+.-.+...+++|.+|.+|++  ..+....|. .+.   .+.++|||.+..
T Consensus         4 vIiDtD~g~DD~~AL~~al~~p~~~l~gIt~v~GN~~~~~~~~na~~~l~~~g~~~IPV~~G~~   67 (312)
T 2c40_A            4 VYFNHDGGVDDLVSLFLLLQMDNVELTGVSVIPADCYLEPAMSASRKIIDRFGKNTIEVAASNS   67 (312)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCTTEEEEEEEECSSSSCHHHHHHHHHHHHHHHCCSCCCEEECCC
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCC
T ss_conf             9998999879999999998789988999999059858899999999999982899873751675


No 86 
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B*
Probab=27.17  E-value=23  Score=15.19  Aligned_cols=26  Identities=8%  Similarity=-0.129  Sum_probs=19.9

Q ss_pred             CCCCHHHHCHHHHHHHHCCC-EEEECC
Q ss_conf             58984330000011110001-012000
Q gi|254780583|r   55 THHHIDHTRANLNLKKFFNC-TIFGPL   80 (256)
Q Consensus        55 TH~H~DHigg~~~l~~~~~~-~v~~~~   80 (256)
                      -|.|.||+-++..+.+..++ +||.|.
T Consensus       135 VHSH~dHL~ali~~a~~~gv~~V~lH~  161 (561)
T 3igz_B          135 VHSRDNQIYSIIEHAVKDGAKRIRVHA  161 (561)
T ss_dssp             SSCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             421277899999999972996189998


No 87 
>2qtd_A Uncharacterized protein MJ0327; NP_247299.1, protein of unknown function, dinitrogenase iron-molybdenum cofactor; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii DSM2661} PDB: 2kla_A
Probab=26.63  E-value=30  Score=14.44  Aligned_cols=72  Identities=15%  Similarity=0.150  Sum_probs=38.0

Q ss_pred             CCCCEEEEEEECCC----E----EEEEEECCCCEEEEECCC-CHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHH
Q ss_conf             98614530110576----2----699998899849998699-98999999998599643999858984330000011110
Q gi|254780583|r    1 MTSLNIAISLYHDN----F----CILIHNHKYRLTAAIDAP-DTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKF   71 (256)
Q Consensus         1 m~~~~i~ip~~~DN----y----~YlI~d~~t~~~viIDpg-d~~~i~~~l~~~~~~i~~Il~TH~H~DHigg~~~l~~~   71 (256)
                      |.+|+|.||.-.+.    |    -|+|+|-++++...++.. ....-...+.+++.  +.|++-+- ..+.  ...| +.
T Consensus         2 m~~MkIAip~~~~~V~~hFG~a~~F~I~d~~~~~i~~~~~~~~~~~~~~~l~~~gv--d~vI~~~i-G~~a--~~~L-~~   75 (105)
T 2qtd_A            2 MINMKVAISMDVDKISNSFEDCKYFLIVRIDDNEVKSTKVIFNDESGKKSIVKENV--NAIICKNI-SEEN--YKKF-SK   75 (105)
T ss_dssp             CCCEEEEEEECSSSBCSCTTTCSEEEEEEEETTEEEEEEEEESSHHHHHHHHHTCC--SEEEESCC-CHHH--HHHH-HT
T ss_pred             CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHCCC--CEEEECCC-CHHH--HHHH-HC
T ss_conf             75359999889997367375788899999409969999813897213568986799--89998986-9889--9999-87


Q ss_pred             CCCEEEEC
Q ss_conf             00101200
Q gi|254780583|r   72 FNCTIFGP   79 (256)
Q Consensus        72 ~~~~v~~~   79 (256)
                       +.+||..
T Consensus        76 -GI~v~~~   82 (105)
T 2qtd_A           76 -KIEIYHA   82 (105)
T ss_dssp             -TCEEEEC
T ss_pred             -CCEEEEC
T ss_conf             -9999981


No 88 
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=26.33  E-value=14  Score=16.56  Aligned_cols=16  Identities=19%  Similarity=0.520  Sum_probs=5.3

Q ss_pred             EEEHHCCCCCCCCCCC
Q ss_conf             3101001111222331
Q gi|254780583|r   93 LSDGDTFDFGSHPIKI  108 (256)
Q Consensus        93 l~dgd~i~ig~~~~~v  108 (256)
                      |.+||.|.+|...+++
T Consensus       122 L~~gD~i~iG~~~l~f  137 (143)
T 2kb3_A          122 MQTGDEIQIGKFRLVF  137 (143)
T ss_dssp             CCTTEEEEETTEEEEE
T ss_pred             CCCCCEEEECCEEEEE
T ss_conf             9999999999999999


No 89 
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A
Probab=26.18  E-value=31  Score=14.39  Aligned_cols=24  Identities=4%  Similarity=-0.013  Sum_probs=13.7

Q ss_pred             CEEEEECCC-------CHHHHHHHHHHCCCC
Q ss_conf             849998699-------989999999985996
Q gi|254780583|r   25 RLTAAIDAP-------DTYIISKMLREKGWF   48 (256)
Q Consensus        25 ~~~viIDpg-------d~~~i~~~l~~~~~~   48 (256)
                      .+++.|.|+       +.+.|++.+++.+.+
T Consensus        95 d~~~~i~~~~~~~sYL~~~~Ii~~A~~~~~d  125 (540)
T 3glk_A           95 DHYVPVPGGPNNNNYANVELIVDIAKRIPVQ  125 (540)
T ss_dssp             SEEEECCCSSGGGTTTCHHHHHHHHHHTTCS
T ss_pred             CEEEECCCCCHHHCCCCHHHHHHHHHHHCCC
T ss_conf             7898718997353004899999999997939


No 90 
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum 3D7}
Probab=25.42  E-value=21  Score=15.43  Aligned_cols=61  Identities=25%  Similarity=0.321  Sum_probs=30.8

Q ss_pred             CCCCHHHHCHHHH--HHHHCCC-------EEEECCCCC---------------CCCCCCCEEEEEHHCCCCCCCCCCCCC
Q ss_conf             5898433000001--1110001-------012000123---------------432332203310100111122233102
Q gi|254780583|r   55 THHHIDHTRANLN--LKKFFNC-------TIFGPLEES---------------SKIPGIDHGLSDGDTFDFGSHPIKIIA  110 (256)
Q Consensus        55 TH~H~DHigg~~~--l~~~~~~-------~v~~~~~~~---------------~~i~~~~~~l~dgd~i~ig~~~~~vi~  110 (256)
                      .|+|.-|..|-..  |++.|..       -+.|.....               ...++.+....-+ .+..++..+.++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~V~lvG~~nvGKSSLln~L~~~~~~v~~~~~tT~~~~~~-~~~~~~~~i~l~D   82 (228)
T 2qu8_A            4 SHHHHHHSSGRENLYFQGLPSINPHKKTIILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVG-HFDHKLNKYQIID   82 (228)
T ss_dssp             ------------------CCSCCTTSEEEEEECSTTSSHHHHHHHHTTTCEEEECC-----CEEEE-EEEETTEEEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCEEECCCEE-EEEECCEEEEEEE
T ss_conf             644444661266789986889899999999999999859999999848997073899830133379-9998996899962


Q ss_pred             CCCCCC
Q ss_conf             554456
Q gi|254780583|r  111 TPGHTI  116 (256)
Q Consensus       111 tPGHT~  116 (256)
                      |||...
T Consensus        83 tpG~~~   88 (228)
T 2qu8_A           83 TPGLLD   88 (228)
T ss_dssp             CTTTTT
T ss_pred             CCCCCC
T ss_conf             565334


No 91 
>1sa3_A Type II restriction enzyme MSPI; protein-DNA complex, hydrolase/DNA complex; 1.95A {Moraxella SP} SCOP: c.52.1.23 PDB: 1yfi_A
Probab=24.87  E-value=32  Score=14.24  Aligned_cols=53  Identities=17%  Similarity=0.261  Sum_probs=32.5

Q ss_pred             CEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHCCCC
Q ss_conf             502016652045889877502344789999999998885789866787899---98728224
Q gi|254780583|r  165 THIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISL---EKKVNPFL  223 (256)
Q Consensus       165 t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~~~~~~~~tvPstl~~---Ek~~NPfl  223 (256)
                      +.| .-|||+++-  |+..+.++++.+++.+..-+...+.+..|   .+..   |...+|+.
T Consensus       124 ~~V-sihEY~v~~--~i~~~~i~dse~~~Li~k~q~~~s~k~Ft---~~~~q~l~e~L~~y~  179 (262)
T 1sa3_A          124 KKV-SIAEYDVET--ICTGVGISDGELKELIRKHQNDQSAKLFT---PVQKQRLTELLEPYR  179 (262)
T ss_dssp             SCC-EEEEECHHH--HHHHHTCCTTHHHHHHHHHHHHTSSTTSC---HHHHHHHHHHHGGGH
T ss_pred             EEE-EEECCCHHH--HHHHHCCCHHHHHHHHHHHHCCCHHCCCC---HHHHHHHHHHHHHHH
T ss_conf             478-833032876--87752888589999999985022000568---358999999878889


No 92 
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=23.50  E-value=33  Score=14.20  Aligned_cols=24  Identities=29%  Similarity=0.314  Sum_probs=13.1

Q ss_pred             CCCCCEEEECCCC-CCCCCCEEEEC
Q ss_conf             5675226861465-43137704304
Q gi|254780583|r  115 TIGHICYHFMNDH-FLCVGDTLFSL  138 (256)
Q Consensus       115 T~g~i~~~~~~~~-~lFtGDtLF~~  138 (256)
                      ..|.|+||.+... ++|-|+|=.++
T Consensus        74 ~~GDiay~~pg~~laifyg~tp~S~   98 (136)
T 1zx8_A           74 EIGDVGYWPPGKALCLFFGKTPMSD   98 (136)
T ss_dssp             CTTEEEEEGGGTEEEEESSCCTTCS
T ss_pred             CCCEEEEECCCCEEEEEECCCCCCC
T ss_conf             4465999889997999978846778


No 93 
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=23.43  E-value=28  Score=14.69  Aligned_cols=68  Identities=19%  Similarity=0.256  Sum_probs=40.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEECC----C-------CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEC
Q ss_conf             1122233102554456752268614----6-------5431377043046134466631567766544201344650201
Q gi|254780583|r  101 FGSHPIKIIATPGHTIGHICYHFMN----D-------HFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSFSDKTHIYF  169 (256)
Q Consensus       101 ig~~~~~vi~tPGHT~g~i~~~~~~----~-------~~lFtGDtLF~~g~Gr~~~G~~~~l~~Sl~kl~~Lp~~t~i~p  169 (256)
                      +|.+++.++..+-.-..|+++...+    +       ...++||.+....|+     ...++-.||++|..-..-.+||-
T Consensus        15 ~G~F~l~~y~~~~~~~~HlALvkGdi~~~~~vLVRVHs~~~~~Dv~~s~~~~-----~~~~L~~al~~I~~~g~Gvlv~l   89 (196)
T 2bz1_A           15 WGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCD-----CGFQLEAALTQIAEEGRGILLYH   89 (196)
T ss_dssp             TEEEEEEEEEETTTCCEEEEEEESCCCSSSCEEEEEEECCHHHHTSCCSSCS-----HHHHHHHHHHHHHHHTSEEEEEE
T ss_pred             CCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCC-----CCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             8548999998289991899999688766888678998625366542366799-----75189999999997598499996


Q ss_pred             CCCC
Q ss_conf             6652
Q gi|254780583|r  170 GHEY  173 (256)
Q Consensus       170 GHeY  173 (256)
                      .+|-
T Consensus        90 ~~~~   93 (196)
T 2bz1_A           90 RQEG   93 (196)
T ss_dssp             CCHH
T ss_pred             CCCC
T ss_conf             6887


No 94 
>3f0d_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; ssgcid, niaid, isoprene biosynthesis, lyase, metal-binding, structural genomics; 1.20A {Burkholderia pseudomallei} PDB: 3f0e_A 3f0f_A* 3f0g_A* 3ieq_A* 3iew_A* 3jvh_A* 3k14_A* 3k2x_A* 3ke1_A* 3mbm_A* 3ikf_A* 3ike_A*
Probab=22.41  E-value=20  Score=15.57  Aligned_cols=62  Identities=21%  Similarity=0.222  Sum_probs=40.2

Q ss_pred             CCCCHHHHCHHHHHHHHCCCE-E-EECCCCCCCCCCCCEEEEEHHCCCCCCCCCCCC-CCCCCCCCCCEEEE
Q ss_conf             589843300000111100010-1-200012343233220331010011112223310-25544567522686
Q gi|254780583|r   55 THHHIDHTRANLNLKKFFNCT-I-FGPLEESSKIPGIDHGLSDGDTFDFGSHPIKII-ATPGHTIGHICYHF  123 (256)
Q Consensus        55 TH~H~DHigg~~~l~~~~~~~-v-~~~~~~~~~i~~~~~~l~dgd~i~ig~~~~~vi-~tPGHT~g~i~~~~  123 (256)
                      .|+|.-|.|-.+...+-++.- + +|.-.|.       |.+.+|..+.+|+..+..- -.-||+.|.+.++-
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~RiG~G~D~-------H~~~~g~~l~LGGv~i~~~~gl~gHSDGDVllHA   66 (183)
T 3f0d_A            2 AHHHHHHMGTLEAQTQGPGSMDFRIGQGYDV-------HQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHA   66 (183)
T ss_dssp             --------------------CCEEEEEEEEE-------EEEEETSCEEETTEEECCSEEECSSSCCCHHHHH
T ss_pred             CCCCCCCCCCHHHCCCCCCCCCEEEEEEEEE-------EEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHH
T ss_conf             7432321112200357999752687847996-------5465999789988970798887505728899999


No 95 
>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A
Probab=22.21  E-value=19  Score=15.76  Aligned_cols=29  Identities=17%  Similarity=0.106  Sum_probs=15.8

Q ss_pred             CEEEEECCCC-----HHHHHHHHHHCCCCEEEEE
Q ss_conf             8499986999-----8999999998599643999
Q gi|254780583|r   25 RLTAAIDAPD-----TYIISKMLREKGWFLTHIF   53 (256)
Q Consensus        25 ~~~viIDpgd-----~~~i~~~l~~~~~~i~~Il   53 (256)
                      +.++|||+.+     .+.+.+.+.+.++.+.-++
T Consensus       108 gavlVVDa~~Gv~~qT~~v~~~~~~~~lp~i~~I  141 (529)
T 2h5e_A          108 CCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFM  141 (529)
T ss_dssp             EEEEEEETTTCSCHHHHHHHHHHTTTTCCEEEEE
T ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf             3699964688742331888877775178707544


No 96 
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=21.35  E-value=38  Score=13.80  Aligned_cols=30  Identities=13%  Similarity=0.190  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHCCCCEEEEEECCCCHHHHCH
Q ss_conf             899999999859964399985898433000
Q gi|254780583|r   35 TYIISKMLREKGWFLTHIFNTHHHIDHTRA   64 (256)
Q Consensus        35 ~~~i~~~l~~~~~~i~~Il~TH~H~DHigg   64 (256)
                      .+.+.+.+++.|++|..|+.||.-.--+|+
T Consensus        68 Yd~l~elv~~~GLKi~vVLsfH~cGgnVgd   97 (516)
T 1vem_A           68 AQRFAQSVKNAGMKMIPIISTHQCGGNVGD   97 (516)
T ss_dssp             HHHHHHHHHHTTCEEEEEEECSCBSSSTTC
T ss_pred             HHHHHHHHHHCCCEEEEEEEECCCCCCCCC
T ss_conf             999999999869958999885204787788


No 97 
>1x87_A Urocanase protein; structural genomics, protein structure initiative, MCSG, PSI, midwest center for structural genomics; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=20.99  E-value=39  Score=13.75  Aligned_cols=26  Identities=19%  Similarity=0.079  Sum_probs=15.6

Q ss_pred             HHHHHHHHHCCC---------CEEEEEECCCCHHH
Q ss_conf             999999998599---------64399985898433
Q gi|254780583|r   36 YIISKMLREKGW---------FLTHIFNTHHHIDH   61 (256)
Q Consensus        36 ~~i~~~l~~~~~---------~i~~Il~TH~H~DH   61 (256)
                      ..+.++|++..-         ++..++-||.+.--
T Consensus        61 ~~i~~~L~~l~~deTL~vqSG~Pvg~f~th~~APR   95 (551)
T 1x87_A           61 EAIVDTLLRLENDETLLIQSGKPVAVFRTHPDAPR   95 (551)
T ss_dssp             HHHHHHHHHCCTTEEEEEETTEEEEEEECCTTSCS
T ss_pred             HHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCE
T ss_conf             99999998378764599975983177148999985


Done!