HHSEARCH alignment of GI: 254780583 and SCOP domain: d1e5da2

Alignment
>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=99.91  E-value=2.8e-24  Score=175.07  Aligned_cols=156  Identities=15%  Similarity=0.136  Sum_probs=116.2

Q ss_pred             CEEEEEEECCCCEEEEECCCC---HHHHHHHHHHC-C-CCEEEEEECCCCHHHHCHHHHHHHHC-CCEEEECCCCCCCC-
Q ss_conf             626999988998499986999---89999999985-9-96439998589843300000111100-01012000123432-
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD---TYIISKMLREK-G-WFLTHIFNTHHHIDHTRANLNLKKFF-NCTIFGPLEESSKI-   86 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~-~-~~i~~Il~TH~H~DHigg~~~l~~~~-~~~v~~~~~~~~~i-   86 (256)
                      | +|||.++   .+++||||.   ...+++.+.+. + .+|++|++||.|.||+||+..+++.. .++++++....... 
T Consensus        35 N-~ylI~~~---~~vLIDtg~~~~~~~~~~~~~~~~~~~~I~~Ii~TH~H~DH~gg~~~~~~~~~~~~~~~~~~~~~~~~  110 (249)
T d1e5da2          35 N-AYLVEDE---KTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAME  110 (249)
T ss_dssp             E-EEEECSS---SCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred             E-EEEEECC---CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCHHHHHHHHHCCCCEEEHHHHHHHHH
T ss_conf             9-9999769---99999198867899999999975698776399968857676431899999723001430245677665


Q ss_pred             ------CCCCEEEEEHHCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCCEEEECCCCC-CCCC------------
Q ss_conf             ------33220331010011112223310255-445675226861465431377043046134-4666------------
Q gi|254780583|r   87 ------PGIDHGLSDGDTFDFGSHPIKIIATP-GHTIGHICYHFMNDHFLCVGDTLFSLGCGR-IFED------------  146 (256)
Q Consensus        87 ------~~~~~~l~dgd~i~ig~~~~~vi~tP-GHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr-~~~G------------  146 (256)
                            ......+.+|+.+++|+.+++++++| |||+||+++|++++++|||||+++..+++. .|..            
T Consensus       111 ~~~~~~~~~~~~~~~g~~l~lg~~~~~~~~~p~gHt~~~~~~~~~~~~~LfsGD~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (249)
T d1e5da2         111 SHFHYKDWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWFADEKVLISNDIFGQNIAASERFSDQIPVHTLERAMR  190 (249)
T ss_dssp             HHHCCSSCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHH
T ss_pred             HHHCCCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             31013566623522786786132389996358888779757996585179951556777778765566677036789999


Q ss_pred             ---------CHHHHHHHHHHHHCC--CCCCEEECCCCCH
Q ss_conf             ---------315677665442013--4465020166520
Q gi|254780583|r  147 ---------SYAEMFESLEKIKSF--SDKTHIYFGHEYT  174 (256)
Q Consensus       147 ---------~~~~l~~Sl~kl~~L--p~~t~i~pGHeYt  174 (256)
                               ..+++.+||++|.++  +.+ .|+|||-..
T Consensus       191 ~~~~~i~~~~~~~~~~~l~~l~~~~l~~~-~i~PgHG~v  228 (249)
T d1e5da2         191 EYYANIVNPYAPQTLKAIETLVGAGVAPE-FICPDHGVI  228 (249)
T ss_dssp             HHHHHHTGGGHHHHHHHHHHHHHTTCCCS-EEEESSSCB
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHCCCCCC-EEECCCCCH
T ss_conf             88776506549999999999983699978-999899734


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: ROO N-terminal domain-like
domain: Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain
species: Desulfovibrio gigas [TaxId: 879]