HHSEARCH alignment of GI: 254780583 and SCOP domain: d1ycga2

Alignment
>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=99.90  E-value=3.3e-24  Score=174.58  Aligned_cols=175  Identities=14%  Similarity=0.121  Sum_probs=124.0

Q ss_pred             CEEEEEEECCCCEEEEECCCC---HHHHHHHHHHC--CCCEEEEEECCCCHHHHCHHHHHHHHC-CCEEEECCCCCCCC-
Q ss_conf             626999988998499986999---89999999985--996439998589843300000111100-01012000123432-
Q gi|254780583|r   14 NFCILIHNHKYRLTAAIDAPD---TYIISKMLREK--GWFLTHIFNTHHHIDHTRANLNLKKFF-NCTIFGPLEESSKI-   86 (256)
Q Consensus        14 Ny~YlI~d~~t~~~viIDpgd---~~~i~~~l~~~--~~~i~~Il~TH~H~DHigg~~~l~~~~-~~~v~~~~~~~~~i-   86 (256)
                      | +|||.++   ++++||||.   .+.+++.+++.  ..+|++|++||.|.||+||+..+.+.. .++++++..+...+ 
T Consensus        37 N-~yli~~e---~~~LIDtg~~~~~~~~~~~~~~~~~~~~i~~Ii~TH~H~DH~gg~~~~~~~~~~~~~~~~~~~~~~l~  112 (249)
T d1ycga2          37 N-AYLIVDD---KTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLK  112 (249)
T ss_dssp             C-CEEECSS---SCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred             E-EEEEECC---CEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHH
T ss_conf             8-9999679---99999899823559999999975698784199914655423667788887505616865067888876


Q ss_pred             ------CCCCEEEEEHHCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCCEEEECCCCCC-CC--C----------
Q ss_conf             ------33220331010011112223310255-4456752268614654313770430461344-66--6----------
Q gi|254780583|r   87 ------PGIDHGLSDGDTFDFGSHPIKIIATP-GHTIGHICYHFMNDHFLCVGDTLFSLGCGRI-FE--D----------  146 (256)
Q Consensus        87 ------~~~~~~l~dgd~i~ig~~~~~vi~tP-GHT~g~i~~~~~~~~~lFtGDtLF~~g~Gr~-~~--G----------  146 (256)
                            ......+.+|+.+++|+.+++++++| |||+|++++|.+++++|||||+++..+++.. +.  .          
T Consensus       113 ~~~~~~~~~~~~~~~g~~l~lg~~~~~~~~~p~~h~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (249)
T d1ycga2         113 AHYSHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYVPEEALLLPNDAFGQHIATSVRFDDQVDAGLIMDEAA  192 (249)
T ss_dssp             HHTCSCCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHH
T ss_pred             HHCCCCCCCEEECCCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             50366543103316987899973578998668888897089997888889965766667788755676554156677765


Q ss_pred             ---------CHHHHHHHHHHHHCCCCC-CEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             ---------315677665442013446-502016652045889877502344789999999998
Q gi|254780583|r  147 ---------SYAEMFESLEKIKSFSDK-THIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKS  200 (256)
Q Consensus       147 ---------~~~~l~~Sl~kl~~Lp~~-t~i~pGHeYt~~nl~Fa~~~~p~n~~~~~~~~~~~~  200 (256)
                               ...++.+||++|..|.-+ ..|+|||-....        +.-.+.+++|..|++.
T Consensus       193 ~~~~~~~~~~~~~~~~~l~~l~~l~l~~~~i~PgHGpv~~--------~~~~~~l~~y~~w~~~  248 (249)
T d1ycga2         193 KYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIWR--------KDPGRIIEAYARWAEG  248 (249)
T ss_dssp             HHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBBC--------SCHHHHHHHHHHHHHT
T ss_pred             HCCHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHH--------CCHHHHHHHHHHHHHC
T ss_conf             2020102668999999999997069998999908980474--------7999999999999727


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: ROO N-terminal domain-like
domain: Nitric oxide reductase N-terminal domain
species: Moorella thermoacetica [TaxId: 1525]