BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780583|ref|YP_003064996.1| glyoxalase II [Candidatus Liberibacter asiaticus str. psy62] (256 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780583|ref|YP_003064996.1| glyoxalase II [Candidatus Liberibacter asiaticus str. psy62] Length = 256 Score = 531 bits (1367), Expect = e-153, Method: Compositional matrix adjust. Identities = 256/256 (100%), Positives = 256/256 (100%) Query: 1 MTSLNIAISLYHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHID 60 MTSLNIAISLYHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHID Sbjct: 1 MTSLNIAISLYHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHID 60 Query: 61 HTRANLNLKKFFNCTIFGPLEESSKIPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHIC 120 HTRANLNLKKFFNCTIFGPLEESSKIPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHIC Sbjct: 61 HTRANLNLKKFFNCTIFGPLEESSKIPGIDHGLSDGDTFDFGSHPIKIIATPGHTIGHIC 120 Query: 121 YHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYF 180 YHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYF Sbjct: 121 YHFMNDHFLCVGDTLFSLGCGRIFEDSYAEMFESLEKIKSFSDKTHIYFGHEYTENNAYF 180 Query: 181 ALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKKVNPFLRIENTSLRKNLNMENAS 240 ALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKKVNPFLRIENTSLRKNLNMENAS Sbjct: 181 ALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTISLEKKVNPFLRIENTSLRKNLNMENAS 240 Query: 241 NLAVFTELRIRKNQSK 256 NLAVFTELRIRKNQSK Sbjct: 241 NLAVFTELRIRKNQSK 256 >gi|254780758|ref|YP_003065171.1| hypothetical protein CLIBASIA_03225 [Candidatus Liberibacter asiaticus str. psy62] Length = 216 Score = 73.6 bits (179), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 22/188 (11%) Query: 6 IAISLYHDNFCILIHNHKYRLTAAIDAPDTYIISKMLREKGWFLTHIFNTHHHIDHTRAN 65 + ++ + N L D II +++ + + + I+ TH H+DH Sbjct: 9 VQVTPFKQNCTFLFDEESLEAVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGA 68 Query: 66 LNLKKFFNCTIFGP----------LEESSKIPGI---------DHGLSDGDTFDFGSHPI 106 LK+ + TI GP ++E +++ I D L DGDT G+H Sbjct: 69 AQLKEDLSLTIIGPHKDDAAMMGKVDEQARLLSIRMNARNASSDRWLQDGDTLLLGTHIF 128 Query: 107 KIIATPGHTIGHICYHFMNDHFLCVGDTLFSLGCGR--IFEDSYAEMFESL-EKIKSFSD 163 K+ PGH+ GH+ Y ++F +GDTLF GR I Y ++ S+ KI D Sbjct: 129 KVFHCPGHSPGHVIYVNFENNFAHLGDTLFRSSIGRTDILHGDYQQLINSINNKILPLGD 188 Query: 164 KTHIYFGH 171 + GH Sbjct: 189 EISFVCGH 196 >gi|254780214|ref|YP_003064627.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 26.6 bits (57), Expect = 0.41, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 27 TAAID-APDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFF 72 T +D PD Y+ ++LRE+ + + TH H DH L+ +F Sbjct: 55 TVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 Score = 23.9 bits (50), Expect = 2.8, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 19/51 (37%) Query: 163 DKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTI 213 D YF + + Y A C H E +YC K R+ NP I Sbjct: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 >gi|254780869|ref|YP_003065282.1| beta-lactamase domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] Length = 559 Score = 25.4 bits (54), Expect = 0.97, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 15/72 (20%) Query: 49 LTHIFNTHHHIDHTRANLNLKKFFNCTIF------GPLEE-------SSKIPGIDHGLSD 95 L IF TH H DH A +L F + ++ G LE S KIP I Sbjct: 68 LMAIFITHAHEDHYGALHDLWSFLHVPVYASPFAIGLLEAKRVYERVSKKIPCIS--FQA 125 Query: 96 GDTFDFGSHPIK 107 GD D G+ I+ Sbjct: 126 GDKVDVGAFSIE 137 >gi|255764495|ref|YP_003065022.2| putative phosphoesterase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 309 Score = 25.0 bits (53), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 182 LSCDPHNLELQKYCSKVKSMRSQNLY-TNPSTISLEKKVNPFLRIEN 227 +S P N + +K KS+ + Y T+ +T S KK+ P+LRI N Sbjct: 99 ISIVPGNHDAYISGAKEKSLHAWKDYITSDTTCSTGKKLFPYLRIRN 145 >gi|254781176|ref|YP_003065589.1| cell division protein FtsZ [Candidatus Liberibacter asiaticus str. psy62] Length = 502 Score = 22.3 bits (46), Expect = 8.3, Method: Compositional matrix adjust. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 138 LGCGRIFEDSYAEMFESLEKIKSFSDKTHIYF 169 LG G E A E +++I DKTH+ F Sbjct: 72 LGAGSHPEVGRAAAEECIDEITEMLDKTHMCF 103 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.323 0.137 0.422 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 176,502 Number of Sequences: 1233 Number of extensions: 7414 Number of successful extensions: 24 Number of sequences better than 100.0: 8 Number of HSP's better than 100.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 14 Number of HSP's gapped (non-prelim): 11 length of query: 256 length of database: 328,796 effective HSP length: 72 effective length of query: 184 effective length of database: 240,020 effective search space: 44163680 effective search space used: 44163680 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 37 (18.9 bits)