HHsearch alignment for GI: 254780584 and conserved domain: CHL00112

Probab=99.94  E-value=8.2e-28  Score=187.20  Aligned_cols=69  Identities=30%  Similarity=0.393  Sum_probs=67.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHHHHH
Q ss_conf             9854101178553677223323023742555248999985577868999997245302364188779997
Q gi|254780584|r    1 MSRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLS   70 (97)
Q Consensus         1 Msr~C~itGk~~~~Gn~vshs~~kTkR~~~PNlq~~~~~s~~l~~~v~l~vst~~lrtI~K~GGlD~yLl   70 (97)
T Consensus         1 Msr~C~lTGKk~~~G~~VShs~~rtkRr~~pNLq~kr~~~~~~~r~V~LrvStkaiktI~K~G-i~~~~K   69 (70)
T CHL00112          1 MSRVCQLTGKKANNGYAVSHSHKRTKKLQKVNLQTKRIWSTEQNRWIKLKISTKAIKTLKKKL-LKSKTK   69 (70)
T ss_pred             CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEHHHHEEEHHHC-HHHHHC
T ss_conf             975633458755678602504653455404652568899537884999999847712113427-787743