HHsearch alignment of GI: 254780584 and MMDB domain: 3i1n_X_34-78
>3i1n_X (X:34-78) 50S ribosomal protein L28; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 2qao_Z* 2qba_Z* 2qbc_Z* 2qbe_Z 2qbg_Z 2qbi_Z* 2qbk_Z* 2qov_Z 2qox_Z 2qoz_Z* 2qp1_Z* 2z4l_Z* 2z4n_Z* 3df2_Z 3df4_Z 2qam_Z 3i1p_X 3i1r_X 3i1t_X 3i20_X ...
Probab=98.57 E-value=8.1e-09 Score=73.24 Aligned_cols=38 Identities=18% Similarity=0.337 Sum_probs=34.8
Q ss_pred EEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHHHHHHC
Q ss_conf 899998557786899999724530236418877999729
Q gi|254780584|r 34 CRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNS 72 (97)
Q Consensus 34 q~~~~~s~~l~~~v~l~vst~~lrtI~K~GGlD~yLl~~ 72 (97)
|+++||+|++++||+|+|||++||||||.| ||.++...
T Consensus 1 q~kR~w~~ee~r~V~LrvStk~lrtIdK~G-i~av~~~~ 38 (45)
T 3i1n_X 1 HSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDTVLAEL 38 (45)
T ss_dssp CCCCEECSSSSSEECCCCBTTHHHHHHHHC-HHHHTHHH
T ss_pred EEEEEEECCCCEEEEEEEEHHHEEEHHHCC-HHHHHHHH
T ss_conf 899999856897999999815420125459-99999999