HHsearch results for GI: 254780584 and protein with PDBid: 2jl6_1
>2jl6_1 50S ribosomal protein L28, 50S ribosomal protein L25; methylation, translation, paromomycin, tRNA-binding, tRNA, zinc, mRNA, ribosome, repressor, RNA-binding; 3.45A {Thermus thermophilus} PDB: 2jl8_1
Probab=99.82 E-value=3.9e-22 Score=151.96 Aligned_cols=60 Identities=25% Similarity=0.455 Sum_probs=57.7
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHC-------------CCCCEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHC
Q ss_conf 98541011785536772233230-------------237425552489999855778689999972453023641
Q gi|254780584|r 1 MSRVCELTKKTVMSGNKVSHANN-------------KTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQ 62 (97)
Q Consensus 1 Msr~C~itGk~~~~Gn~vshs~~-------------kTkR~~~PNlq~~~~~s~~l~~~v~l~vst~~lrtI~K~ 62 (97)
|||+|+||||+|++||+||||++ +|+|+|+||||++++|+| +++++|+|||+|||||+|.
T Consensus 1 Msr~C~itGK~~~~Gn~vshsgkakk~Gg~g~~~~~kTkR~fkPNLQkkri~~~--g~~vkvrVStkaLRTI~kl 73 (89)
T 2jl6_1 1 MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVA--GQEITFRVAASHIPKVYEL 73 (89)
T ss_dssp --CCCSSSCCCCEEEEEEEEESCCTTTSSSCCEEEEEEEEEECCCBCCBCCEET--TEECCBCCBGGGHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEC--CEEEEEEEEHHHHHHHHHH
T ss_conf 977635679750248868724732213775223578426573368248999989--9999999996996529998